Merge remote-tracking branch 'origin/master' into nix-2.0

1451 files changed, 38254 insertions, 19355 deletions

diff --git a/doc/languages-frameworks/haskell.md b/doc/languages-frameworks/haskell.md
index 629db289ab1d..764fae3ce936 100644
--- a/doc/languages-frameworks/haskell.md
+++ b/doc/languages-frameworks/haskell.md
@@ -334,14 +334,10 @@ navigate there.
 
 Finally, you can run
 ```shell
-hoogle server -p 8080
+hoogle server -p 8080 --local
 ```
 and navigate to http://localhost:8080/ for your own local
-[Hoogle](https://www.haskell.org/hoogle/). Note, however, that Firefox and
-possibly other browsers disallow navigation from `http:` to `file:` URIs for
-security reasons, which might be quite an inconvenience. See [this
-page](http://kb.mozillazine.org/Links_to_local_pages_do_not_work) for
-workarounds.
+[Hoogle](https://www.haskell.org/hoogle/).
 
 ### How to build a Haskell project using Stack
 
diff --git a/doc/languages-frameworks/rust.md b/doc/languages-frameworks/rust.md
index d3a25e9d1358..f0498eac5b19 100644
--- a/doc/languages-frameworks/rust.md
+++ b/doc/languages-frameworks/rust.md
@@ -58,6 +58,8 @@ To install crates with nix there is also an experimental project called
 
 ## Compiling Rust crates using Nix instead of Cargo
 
+### Simple operation
+
 When run, `cargo build` produces a file called `Cargo.lock`,
 containing pinned versions of all dependencies. Nixpkgs contains a
 tool called `carnix` (`nix-env -iA nixos.carnix`), which can be used
@@ -153,6 +155,8 @@ Here, the `libc` crate has no `src` attribute, so `buildRustCrate`
 will fetch it from [crates.io](https://crates.io). A `sha256`
 attribute is still needed for Nix purity.
 
+### Handling external dependencies
+
 Some crates require external libraries. For crates from
 [crates.io](https://crates.io), such libraries can be specified in
 `defaultCrateOverrides` package in nixpkgs itself.
@@ -210,7 +214,10 @@ with import <nixpkgs> {};
 }
 ```
 
-Three more parameters can be overridden:
+### Options and phases configuration
+
+Actually, the overrides introduced in the previous section are more
+general. A number of other parameters can be overridden:
 
 - The version of rustc used to compile the crate:
 
@@ -232,6 +239,30 @@ Three more parameters can be overridden:
   (hello {}).override { verbose = false; };
   ```
 
+- Extra arguments to be passed to `rustc`:
+
+  ```
+  (hello {}).override { extraRustcOpts = "-Z debuginfo=2"; };
+  ```
+
+- Phases, just like in any other derivation, can be specified using
+  the following attributes: `preUnpack`, `postUnpack`, `prePatch`,
+  `patches`, `postPatch`, `preConfigure` (in the case of a Rust crate,
+  this is run before calling the "build" script), `postConfigure`
+  (after the "build" script),`preBuild`, `postBuild`, `preInstall` and
+  `postInstall`. As an example, here is how to create a new module
+  before running the build script:
+
+  ```
+  (hello {}).override {
+    preConfigure = ''
+       echo "pub const PATH=\"${hi.out}\";" >> src/path.rs"
+    '';
+  };
+  ```
+
+### Features
+
 One can also supply features switches. For example, if we want to
 compile `diesel_cli` only with the `postgres` feature, and no default
 features, we would write:
@@ -243,7 +274,7 @@ features, we would write:
 }
 ```
 
-
+Where `diesel.nix` is the file generated by Carnix, as explained above.
 
 ## Using the Rust nightlies overlay
 
diff --git a/doc/package-notes.xml b/doc/package-notes.xml
index b657f5809db9..2d6c87c3d07a 100644
--- a/doc/package-notes.xml
+++ b/doc/package-notes.xml
@@ -660,6 +660,32 @@ cp ${myEmacsConfig} $out/share/emacs/site-lisp/default.el
   passing <command>-q</command> to the Emacs command.
 </para>
 
+<para>
+  Sometimes <varname>emacsWithPackages</varname> is not enough, as
+  this package set has some priorities imposed on packages (with
+  the lowest priority assigned to Melpa Unstable, and the highest for
+  packages manually defined in
+  <filename>pkgs/top-level/emacs-packages.nix</filename>). But you
+  can't control this priorities when some package is installed as a
+  dependency. You can override it on per-package-basis, providing all
+  the required dependencies manually - but it's tedious and there is
+  always a possibility that an unwanted dependency will sneak in
+  through some other package. To completely override such a package
+  you can use <varname>overrideScope</varname>.
+</para>
+
+<screen>
+overrides = super: self: rec {
+  haskell-mode = self.melpaPackages.haskell-mode;
+  ...
+};
+((emacsPackagesNgGen emacs).overrideScope overrides).emacsWithPackages (p: with p; [
+  # here both these package will use haskell-mode of our own choice
+  ghc-mod
+  dante
+])
+</screen>
+
 </section>
 
 </section>
diff --git a/doc/stdenv.xml b/doc/stdenv.xml
index 3a7b23baaa7e..2a3316b8d018 100644
--- a/doc/stdenv.xml
+++ b/doc/stdenv.xml
@@ -1802,6 +1802,20 @@ addEnvHooks "$hostOffset" myBashFunction
     disabled or patched to work with PaX.</para></listitem>
   </varlistentry>
 
+  <varlistentry>
+    <term>autoPatchelfHook</term>
+    <listitem><para>This is a special setup hook which helps in packaging
+    proprietary software in that it automatically tries to find missing shared
+    library dependencies of ELF files. All packages within the
+    <envar>runtimeDependencies</envar> environment variable are unconditionally
+    added to executables, which is useful for programs that use
+    <citerefentry>
+      <refentrytitle>dlopen</refentrytitle>
+      <manvolnum>3</manvolnum>
+    </citerefentry>
+    to load libraries at runtime.</para></listitem>
+  </varlistentry>
+
 </variablelist>
 
 </para>
diff --git a/lib/default.nix b/lib/default.nix
index 97d7c10192a7..77cfa712557c 100644
--- a/lib/default.nix
+++ b/lib/default.nix
@@ -56,7 +56,8 @@ let
       replaceStrings seq stringLength sub substring tail;
     inherit (trivial) id const concat or and boolToString mergeAttrs
       flip mapNullable inNixShell min max importJSON warn info
-      nixpkgsVersion mod functionArgs setFunctionArgs isFunction;
+      nixpkgsVersion mod compare splitByAndCompare
+      functionArgs setFunctionArgs isFunction;
 
     inherit (fixedPoints) fix fix' extends composeExtensions
       makeExtensible makeExtensibleWithCustomName;
@@ -71,8 +72,8 @@ let
     inherit (lists) singleton foldr fold foldl foldl' imap0 imap1
       concatMap flatten remove findSingle findFirst any all count
       optional optionals toList range partition zipListsWith zipLists
-      reverseList listDfs toposort sort take drop sublist last init
-      crossLists unique intersectLists subtractLists
+      reverseList listDfs toposort sort compareLists take drop sublist
+      last init crossLists unique intersectLists subtractLists
       mutuallyExclusive;
     inherit (strings) concatStrings concatMapStrings concatImapStrings
       intersperse concatStringsSep concatMapStringsSep
diff --git a/lib/licenses.nix b/lib/licenses.nix
index 0086bd63ebd9..03af13b990e2 100644
--- a/lib/licenses.nix
+++ b/lib/licenses.nix
@@ -2,7 +2,7 @@
 let
 
   spdx = lic: lic // {
-    url = "http://spdx.org/licenses/${lic.spdxId}";
+    url = "http://spdx.org/licenses/${lic.spdxId}.html";
   };
 
 in
@@ -79,6 +79,11 @@ lib.mapAttrs (n: v: v // { shortName = n; }) rec {
     fullName = ''Beerware License'';
   };
 
+  bsd0 = spdx {
+    spdxId = "0BSD";
+    fullName = "BSD Zero Clause License";
+  };
+
   bsd2 = spdx {
     spdxId = "BSD-2-Clause";
     fullName = ''BSD 2-clause "Simplified" License'';
@@ -94,6 +99,11 @@ lib.mapAttrs (n: v: v // { shortName = n; }) rec {
     fullName = ''BSD 4-clause "Original" or "Old" License'';
   };
 
+  clArtistic = spdx {
+    spdxId = "ClArtistic";
+    fullName = "Clarified Artistic License";
+  };
+
   cc0 = spdx {
     spdxId = "CC0-1.0";
     fullName = "Creative Commons Zero v1.0 Universal";
@@ -482,6 +492,12 @@ lib.mapAttrs (n: v: v // { shortName = n; }) rec {
     fullName = "PostgreSQL License";
   };
 
+  postman = {
+    fullName = "Postman EULA";
+    url = https://www.getpostman.com/licenses/postman_base_app;
+    free = false;
+  };
+
   psfl = spdx {
     spdxId = "Python-2.0";
     fullName = "Python Software Foundation License version 2";
@@ -569,6 +585,11 @@ lib.mapAttrs (n: v: v // { shortName = n; }) rec {
     fullName = "Vovida Software License v1.0";
   };
 
+  watcom = spdx {
+    spdxId = "Watcom-1.0";
+    fullName = "Sybase Open Watcom Public License 1.0";
+  };
+
   w3c = spdx {
     spdxId = "W3C";
     fullName = "W3C Software Notice and License";
@@ -603,5 +624,4 @@ lib.mapAttrs (n: v: v // { shortName = n; }) rec {
     spdxId = "ZPL-2.1";
     fullName = "Zope Public License 2.1";
   };
-
 }
diff --git a/lib/lists.nix b/lib/lists.nix
index 8f67c6bb0ca3..424d2c57f556 100644
--- a/lib/lists.nix
+++ b/lib/lists.nix
@@ -385,6 +385,30 @@ rec {
       if len < 2 then list
       else (sort strictLess pivot.left) ++  [ first ] ++  (sort strictLess pivot.right));
 
+  /* Compare two lists element-by-element.
+
+     Example:
+       compareLists compare [] []
+       => 0
+       compareLists compare [] [ "a" ]
+       => -1
+       compareLists compare [ "a" ] []
+       => 1
+       compareLists compare [ "a" "b" ] [ "a" "c" ]
+       => 1
+  */
+  compareLists = cmp: a: b:
+    if a == []
+    then if b == []
+         then 0
+         else -1
+    else if b == []
+         then 1
+         else let rel = cmp (head a) (head b); in
+              if rel == 0
+              then compareLists cmp (tail a) (tail b)
+              else rel;
+
   /* Return the first (at most) N elements of a list.
 
      Example:
@@ -440,8 +464,12 @@ rec {
   init = list: assert list != []; take (length list - 1) list;
 
 
-  /* FIXME(zimbatm) Not used anywhere
-   */
+  /* return the image of the cross product of some lists by a function
+
+    Example:
+      crossLists (x:y: "${toString x}${toString y}") [[1 2] [3 4]]
+      => [ "13" "14" "23" "24" ]
+  */
   crossLists = f: foldl (fs: args: concatMap (f: map f args) fs) [f];
 
 
diff --git a/lib/maintainers.nix b/lib/maintainers.nix
index 9ff2d53b4668..901875236f2a 100644
--- a/lib/maintainers.nix
+++ b/lib/maintainers.nix
@@ -47,6 +47,7 @@
   andir = "Andreas Rammhold <andreas@rammhold.de>";
   andres = "Andres Loeh <ksnixos@andres-loeh.de>";
   andrestylianos = "Andre S. Ramos <andre.stylianos@gmail.com>";
+  andrew-d = "Andrew Dunham <andrew@du.nham.ca>";
   andrewrk = "Andrew Kelley <superjoe30@gmail.com>";
   andsild = "Anders Sildnes <andsild@gmail.com>";
   aneeshusa = "Aneesh Agrawal <aneeshusa@gmail.com>";
@@ -225,6 +226,7 @@
   ertes = "Ertugrul Söylemez <esz@posteo.de>";
   ethercrow = "Dmitry Ivanov <ethercrow@gmail.com>";
   etu = "Elis Hirwing <elis@hirwing.se>";
+  exfalso = "Andras Slemmer <0slemi0@gmail.com>";
   exi = "Reno Reckling <nixos@reckling.org>";
   exlevan = "Alexey Levan <exlevan@gmail.com>";
   expipiplus1 = "Joe Hermaszewski <nix@monoid.al>";
@@ -258,6 +260,7 @@
   gavin = "Gavin Rogers <gavin@praxeology.co.uk>";
   gebner = "Gabriel Ebner <gebner@gebner.org>";
   geistesk = "Alvar Penning <post@0x21.biz>";
+  genesis = "Ronan Bignaux <ronan@aimao.org>";
   georgewhewell = "George Whewell <georgerw@gmail.com>";
   gilligan = "Tobias Pflug <tobias.pflug@gmail.com>";
   giogadi = "Luis G. Torres <lgtorres42@gmail.com>";
@@ -324,6 +327,7 @@
   jirkamarsik = "Jirka Marsik <jiri.marsik89@gmail.com>";
   jlesquembre = "José Luis Lafuente <jl@lafuente.me>";
   jluttine = "Jaakko Luttinen <jaakko.luttinen@iki.fi>";
+  Jo = "Joachim Ernst <0x4A6F@shackspace.de>";
   joachifm = "Joachim Fasting <joachifm@fastmail.fm>";
   joamaki = "Jussi Maki <joamaki@gmail.com>";
   joelmo = "Joel Moberg <joel.moberg@gmail.com>";
@@ -366,6 +370,7 @@
   kristoff3r = "Kristoffer Søholm <k.soeholm@gmail.com>";
   ktosiek = "Tomasz Kontusz <tomasz.kontusz@gmail.com>";
   kuznero = "Roman Kuznetsov <roman@kuznero.com>";
+  lasandell = "Luke Sandell <lasandell@gmail.com>";
   lassulus = "Lassulus <lassulus@gmail.com>";
   layus = "Guillaume Maudoux <layus.on@gmail.com>";
   ldesgoui = "Lucas Desgouilles <ldesgoui@gmail.com>";
@@ -380,6 +385,7 @@
   lheckemann = "Linus Heckemann <git@sphalerite.org>";
   lhvwb = "Nathaniel Baxter <nathaniel.baxter@gmail.com>";
   lihop = "Leroy Hopson <nixos@leroy.geek.nz>";
+  limeytexan = "Michael Brantley <limeytexan@gmail.com>";
   linquize = "Linquize <linquize@yahoo.com.hk>";
   linus = "Linus Arver <linusarver@gmail.com>";
   lluchs = "Lukas Werling <lukas.werling@gmail.com>";
@@ -447,6 +453,7 @@
   mirrexagon = "Andrew Abbott <mirrexagon@mirrexagon.com>";
   mjanczyk = "Marcin Janczyk <m@dragonvr.pl>";
   mjp = "Mike Playle <mike@mythik.co.uk>"; # github = "MikePlayle";
+  mkg = "Mark K Gardner <mkg@vt.edu>";
   mlieberman85 = "Michael Lieberman <mlieberman85@gmail.com>";
   mmahut = "Marek Mahut <marek.mahut@gmail.com>";
   moaxcp = "John Mercier <moaxcp@gmail.com>";
@@ -474,6 +481,7 @@
   mudri = "James Wood <lamudri@gmail.com>";
   muflax = "Stefan Dorn <mail@muflax.com>";
   myrl = "Myrl Hex <myrl.0xf@gmail.com>";
+  nadrieril = "Nadrieril Feneanar <nadrieril@gmail.com>";
   namore = "Roman Naumann <namor@hemio.de>";
   nand0p = "Fernando Jose Pando <nando@hex7.com>";
   Nate-Devv = "Nathan Moore <natedevv@gmail.com>";
@@ -489,6 +497,8 @@
   nicknovitski = "Nick Novitski <nixpkgs@nicknovitski.com>";
   nico202 = "Nicolò Balzarotti <anothersms@gmail.com>";
   NikolaMandic = "Ratko Mladic <nikola@mandic.email>";
+  ninjatrappeur = "Félix Baylac-Jacqué <felix@alternativebit.fr>";
+  nipav = "Niko Pavlinek <niko.pavlinek@gmail.com>";
   nixy = "Andrew R. M. <nixy@nixy.moe>";
   nmattia = "Nicolas Mattia <nicolas@nmattia.com>";
   nocoolnametom = "Tom Doggett <nocoolnametom@gmail.com>";
@@ -549,7 +559,7 @@
   pradeepchhetri = "Pradeep Chhetri <pradeep.chhetri89@gmail.com>";
   prikhi = "Pavan Rikhi <pavan.rikhi@gmail.com>";
   primeos = "Michael Weiss <dev.primeos@gmail.com>";
-  profpatsch = "Profpatsch <mail@profpatsch.de>";
+  Profpatsch = "Profpatsch <mail@profpatsch.de>";
   proglodyte = "Proglodyte <proglodyte23@gmail.com>";
   pshendry = "Paul Hendry <paul@pshendry.com>";
   psibi = "Sibi <sibi@psibi.in>";
@@ -656,15 +666,18 @@
   sternenseemann = "Lukas Epple <post@lukasepple.de>";
   stesie = "Stefan Siegl <stesie@brokenpipe.de>";
   steveej = "Stefan Junker <mail@stefanjunker.de>";
+  StijnDW = "Stijn DW <stekke@airmail.cc>";
   StillerHarpo = "Florian Engel <florianengel39@gmail.com>";
   stumoss = "Stuart Moss <samoss@gmail.com>";
   SuprDewd = "Bjarki Ágúst Guðmundsson <suprdewd@gmail.com>";
+  suvash = "Suvash Thapaliya <suvash+nixpkgs@gmail.com>";
   swarren83 = "Shawn Warren <shawn.w.warren@gmail.com>";
   swflint = "Samuel W. Flint <swflint@flintfam.org>";
   swistak35 = "Rafał Łasocha <me@swistak35.com>";
   symphorien = "Guillaume Girol <symphorien_nixpkgs@xlumurb.eu>";
   szczyp = "Szczyp <qb@szczyp.com>";
   sztupi = "Attila Sztupak <attila.sztupak@gmail.com>";
+  tadfisher = "Tad Fisher <tadfisher@gmail.com>";
   taeer = "Taeer Bar-Yam <taeer@necsi.edu>";
   tailhook = "Paul Colomiets <paul@colomiets.name>";
   taketwo = "Sergey Alexandrov <alexandrov88@gmail.com>";
@@ -697,6 +710,7 @@
   tomberek = "Thomas Bereknyei <tomberek@gmail.com>";
   tomsmeets = "Tom Smeets <tom@tsmeets.nl>";
   travisbhartwell = "Travis B. Hartwell <nafai@travishartwell.net>";
+  treemo = "Matthieu Chevrier <matthieu.chevrier@treemo.fr>";
   trevorj = "Trevor Joynson <nix@trevor.joynson.io>";
   trino = "Hubert Mühlhans <muehlhans.hubert@ekodia.de>";
   tstrobel = "Thomas Strobel <4ZKTUB6TEP74PYJOPWIR013S2AV29YUBW5F9ZH2F4D5UMJUJ6S@hash.domains>";
@@ -711,11 +725,13 @@
   utdemir = "Utku Demir <me@utdemir.com>";
   #urkud = "Yury G. Kudryashov <urkud+nix@ya.ru>"; inactive since 2012
   uwap = "uwap <me@uwap.name>";
+  va1entin = "Valentin Heidelberger <github@valentinsblog.com>";
   vaibhavsagar = "Vaibhav Sagar <vaibhavsagar@gmail.com>";
   valeriangalliat = "Valérian Galliat <val@codejam.info>";
   vandenoever = "Jos van den Oever <jos@vandenoever.info>";
   vanschelven = "Klaas van Schelven <klaas@vanschelven.com>";
   vanzef = "Ivan Solyankin <vanzef@gmail.com>";
+  varunpatro = "Varun Patro <varun.kumar.patro@gmail.com>";
   vbgl = "Vincent Laporte <Vincent.Laporte@gmail.com>";
   vbmithr = "Vincent Bernardoff <vb@luminar.eu.org>";
   vcunat = "Vladimír Čunát <vcunat@gmail.com>";
@@ -749,6 +765,7 @@
   wscott = "Wayne Scott <wsc9tt@gmail.com>";
   wyvie = "Elijah Rum <elijahrum@gmail.com>";
   xaverdh = "Dominik Xaver Hörl <hoe.dom@gmx.de>";
+  xeji = "xeji <xeji@cat3.de>";
   xnwdd = "Guillermo NWDD <nwdd+nixos@no.team>";
   xurei = "Olivier Bourdoux <olivier.bourdoux@gmail.com>";
   xvapx = "Marti Serra <marti.serra.coscollano@gmail.com>";
@@ -757,6 +774,7 @@
   y0no = "Yoann Ono <y0no@y0no.fr>";
   yarr = "Dmitry V. <savraz@gmail.com>";
   yegortimoshenko = "Yegor Timoshenko <yegortimoshenko@gmail.com>";
+  yesbox = "Jesper Geertsen Jonsson <jesper.geertsen.jonsson@gmail.com>";
   ylwghst = "Burim Augustin Berisa <ylwghst@onionmail.info>";
   yochai = "Yochai <yochai@titat.info>";
   yorickvp = "Yorick van Pelt <yorickvanpelt@gmail.com>";
diff --git a/lib/options.nix b/lib/options.nix
index 769d3cc55723..9446eca36778 100644
--- a/lib/options.nix
+++ b/lib/options.nix
@@ -14,6 +14,7 @@ rec {
     , defaultText ? null # Textual representation of the default, for in the manual.
     , example ? null # Example value used in the manual.
     , description ? null # String describing the option.
+    , relatedPackages ? null # Related packages used in the manual (see `genRelatedPackages` in ../nixos/doc/manual/default.nix).
     , type ? null # Option type, providing type-checking and value merging.
     , apply ? null # Function that converts the option value to something else.
     , internal ? null # Whether the option is for NixOS developers only.
@@ -76,7 +77,6 @@ rec {
   getValues = map (x: x.value);
   getFiles = map (x: x.file);
 
-
   # Generate documentation template from the list of option declaration like
   # the set generated with filterOptionSets.
   optionAttrSetToDocList = optionAttrSetToDocList' [];
@@ -85,6 +85,7 @@ rec {
     concatMap (opt:
       let
         docOption = rec {
+          loc = opt.loc;
           name = showOption opt.loc;
           description = opt.description or (throw "Option `${name}' has no description.");
           declarations = filter (x: x != unknownModule) opt.declarations;
@@ -93,9 +94,10 @@ rec {
           readOnly = opt.readOnly or false;
           type = opt.type.description or null;
         }
-        // (if opt ? example then { example = scrubOptionValue opt.example; } else {})
-        // (if opt ? default then { default = scrubOptionValue opt.default; } else {})
-        // (if opt ? defaultText then { default = opt.defaultText; } else {});
+        // optionalAttrs (opt ? example) { example = scrubOptionValue opt.example; }
+        // optionalAttrs (opt ? default) { default = scrubOptionValue opt.default; }
+        // optionalAttrs (opt ? defaultText) { default = opt.defaultText; }
+        // optionalAttrs (opt ? relatedPackages && opt.relatedPackages != null) { inherit (opt) relatedPackages; };
 
         subOptions =
           let ss = opt.type.getSubOptions opt.loc;
diff --git a/lib/systems/default.nix b/lib/systems/default.nix
index b1036b80c4db..0729cc7ef293 100644
--- a/lib/systems/default.nix
+++ b/lib/systems/default.nix
@@ -26,7 +26,8 @@ rec {
       libc =
         /**/ if final.isDarwin then "libSystem"
         else if final.isMinGW  then "msvcrt"
-        else if final.isLinux  then "glibc"
+        else if final.isMusl  then "musl"
+        else if final.isLinux /* default */    then "glibc"
         # TODO(@Ericson2314) think more about other operating systems
         else                        "native/impure";
       extensions = {
diff --git a/lib/systems/examples.nix b/lib/systems/examples.nix
index 5fc36c5b056a..bd68ee9460e7 100644
--- a/lib/systems/examples.nix
+++ b/lib/systems/examples.nix
@@ -13,7 +13,6 @@ rec {
     config = "armv5tel-unknown-linux-gnueabi";
     arch = "armv5tel";
     float = "soft";
-    libc = "glibc";
     platform = platforms.sheevaplug;
   };
 
@@ -22,7 +21,6 @@ rec {
     arch = "armv6l";
     float = "hard";
     fpu = "vfp";
-    libc = "glibc";
     platform = platforms.raspberrypi;
   };
 
@@ -31,14 +29,12 @@ rec {
     arch = "armv7-a";
     float = "hard";
     fpu = "vfpv3-d16";
-    libc = "glibc";
     platform = platforms.armv7l-hf-multiplatform;
   };
 
   aarch64-multiplatform = rec {
     config = "aarch64-unknown-linux-gnu";
     arch = "aarch64";
-    libc = "glibc";
     platform = platforms.aarch64-multiplatform;
   };
 
@@ -51,7 +47,6 @@ rec {
     arch = "armv5tel";
     config = "armv5tel-unknown-linux-gnueabi";
     float = "soft";
-    libc = "glibc";
     platform = platforms.pogoplug4;
   };
 
@@ -59,10 +54,28 @@ rec {
     config = "mips64el-unknown-linux-gnu";
     arch = "mips";
     float = "hard";
-    libc = "glibc";
     platform = platforms.fuloong2f_n32;
   };
 
+  muslpi = raspberryPi // {
+    config = "armv6l-unknown-linux-musleabihf";
+  };
+
+  aarch64-multiplatform-musl = aarch64-multiplatform // {
+    config = "aarch64-unknown-linux-musl";
+  };
+
+  musl64 = { config = "x86_64-unknown-linux-musl"; };
+  musl32  = { config = "i686-unknown-linux-musl"; };
+
+  riscv = bits: {
+    config = "riscv${bits}-unknown-linux-gnu";
+    platform = platforms.riscv-multiplatform bits;
+  };
+  riscv64 = riscv "64";
+  riscv32 = riscv "32";
+
+
   #
   # Darwin
   #
diff --git a/lib/systems/inspect.nix b/lib/systems/inspect.nix
index 3f0335a0adf5..0fce5254dcb4 100644
--- a/lib/systems/inspect.nix
+++ b/lib/systems/inspect.nix
@@ -33,6 +33,8 @@ rec {
     Windows      = { kernel = kernels.windows; };
     Cygwin       = { kernel = kernels.windows; abi = abis.cygnus; };
     MinGW        = { kernel = kernels.windows; abi = abis.gnu; };
+
+    Musl         = with abis; map (a: { abi = a; }) [ musl musleabi musleabihf ];
   };
 
   matchAnyAttrs = patterns:
diff --git a/lib/systems/parse.nix b/lib/systems/parse.nix
index 37a8c848c5d0..95759b93ae08 100644
--- a/lib/systems/parse.nix
+++ b/lib/systems/parse.nix
@@ -180,6 +180,9 @@ rec {
     androideabi = {};
     gnueabi = {};
     gnueabihf = {};
+    musleabi = {};
+    musleabihf = {};
+    musl = {};
 
     unknown = {};
   };
diff --git a/lib/systems/platforms.nix b/lib/systems/platforms.nix
index fd43ceaa0df2..9350a16017dd 100644
--- a/lib/systems/platforms.nix
+++ b/lib/systems/platforms.nix
@@ -2,7 +2,6 @@
 rec {
   pcBase = {
     name = "pc";
-    kernelHeadersBaseConfig = "defconfig";
     kernelBaseConfig = "defconfig";
     # Build whatever possible as a module, if not stated in the extra config.
     kernelAutoModules = true;
@@ -30,7 +29,6 @@ rec {
     };
 
     kernelMajor = "2.6";
-    kernelHeadersBaseConfig = "multi_v5_defconfig";
     kernelBaseConfig = "multi_v5_defconfig";
     kernelArch = "arm";
     kernelAutoModules = false;
@@ -54,7 +52,6 @@ rec {
   sheevaplug = {
     name = "sheevaplug";
     kernelMajor = "2.6";
-    kernelHeadersBaseConfig = "multi_v5_defconfig";
     kernelBaseConfig = "multi_v5_defconfig";
     kernelArch = "arm";
     kernelAutoModules = false;
@@ -168,7 +165,6 @@ rec {
   raspberrypi = {
     name = "raspberrypi";
     kernelMajor = "2.6";
-    kernelHeadersBaseConfig = "bcm2835_defconfig";
     kernelBaseConfig = "bcmrpi_defconfig";
     kernelDTB = true;
     kernelArch = "arm";
@@ -347,7 +343,6 @@ rec {
   utilite = {
     name = "utilite";
     kernelMajor = "2.6";
-    kernelHeadersBaseConfig = "multi_v7_defconfig";
     kernelBaseConfig = "multi_v7_defconfig";
     kernelArch = "arm";
     kernelAutoModules = false;
@@ -379,13 +374,11 @@ rec {
     # patch.
 
     kernelBaseConfig = "guruplug_defconfig";
-    #kernelHeadersBaseConfig = "guruplug_defconfig";
   };
 
   fuloong2f_n32 = {
     name = "fuloong2f_n32";
     kernelMajor = "2.6";
-    kernelHeadersBaseConfig = "fuloong2e_defconfig";
     kernelBaseConfig = "lemote2f_defconfig";
     kernelArch = "mips";
     kernelAutoModules = false;
@@ -471,7 +464,6 @@ rec {
   armv7l-hf-multiplatform = {
     name = "armv7l-hf-multiplatform";
     kernelMajor = "2.6"; # Using "2.6" enables 2.6 kernel syscalls in glibc.
-    kernelHeadersBaseConfig = "multi_v7_defconfig";
     kernelBaseConfig = "multi_v7_defconfig";
     kernelArch = "arm";
     kernelDTB = true;
@@ -479,6 +471,11 @@ rec {
     kernelPreferBuiltin = true;
     kernelTarget = "zImage";
     kernelExtraConfig = ''
+      # Serial port for Raspberry Pi 3. Upstream forgot to add it to the ARMv7 defconfig.
+      SERIAL_8250_BCM2835AUX y
+      SERIAL_8250_EXTENDED y
+      SERIAL_8250_SHARE_IRQ y
+
       # Fix broken sunxi-sid nvmem driver.
       TI_CPTS y
 
@@ -512,7 +509,6 @@ rec {
   aarch64-multiplatform = {
     name = "aarch64-multiplatform";
     kernelMajor = "2.6"; # Using "2.6" enables 2.6 kernel syscalls in glibc.
-    kernelHeadersBaseConfig = "defconfig";
     kernelBaseConfig = "defconfig";
     kernelArch = "arm64";
     kernelDTB = true;
@@ -545,6 +541,19 @@ rec {
     };
   };
 
+  riscv-multiplatform = bits: {
+    name = "riscv-multiplatform";
+    kernelArch = "riscv";
+    bfdEmulation = "elf${bits}lriscv";
+    kernelTarget = "vmlinux";
+    kernelAutoModules = true;
+    kernelBaseConfig = "defconfig";
+    kernelExtraConfig = ''
+      FTRACE n
+      SERIAL_OF_PLATFORM y
+    '';
+  };
+
   selectBySystem = system: {
       "i686-linux" = pc32;
       "x86_64-linux" = pc64;
diff --git a/lib/trivial.nix b/lib/trivial.nix
index d8d51298143e..a928e1dbca98 100644
--- a/lib/trivial.nix
+++ b/lib/trivial.nix
@@ -81,6 +81,42 @@ rec {
   */
   mod = base: int: base - (int * (builtins.div base int));
 
+  /* C-style comparisons
+
+     a < b,  compare a b => -1
+     a == b, compare a b => 0
+     a > b,  compare a b => 1
+  */
+  compare = a: b:
+    if a < b
+    then -1
+    else if a > b
+         then 1
+         else 0;
+
+  /* Split type into two subtypes by predicate `p`, take all elements
+     of the first subtype to be less than all the elements of the
+     second subtype, compare elements of a single subtype with `yes`
+     and `no` respectively.
+
+     Example:
+
+       let cmp = splitByAndCompare (hasPrefix "foo") compare compare; in
+
+       cmp "a" "z" => -1
+       cmp "fooa" "fooz" => -1
+
+       cmp "f" "a" => 1
+       cmp "fooa" "a" => -1
+       # while
+       compare "fooa" "a" => 1
+
+  */
+  splitByAndCompare = p: yes: no: a: b:
+    if p a
+    then if p b then yes a b else -1
+    else if p b then 1 else no a b;
+
   /* Reads a JSON file. */
   importJSON = path:
     builtins.fromJSON (builtins.readFile path);
diff --git a/lib/types.nix b/lib/types.nix
index 88fc90d05970..a334db5c7247 100644
--- a/lib/types.nix
+++ b/lib/types.nix
@@ -256,6 +256,10 @@ rec {
       functor = (defaultFunctor name) // { wrapped = elemType; };
     };
 
+    nonEmptyListOf = elemType: 
+      let list = addCheck (types.listOf elemType) (l: l != []);
+      in list // { description = "non-empty " + list.description; };
+
     attrsOf = elemType: mkOptionType rec {
       name = "attrsOf";
       description = "attribute set of ${elemType.description}s";
diff --git a/nixos/default.nix b/nixos/default.nix
index 0e45a1cd75e2..45da78e9261c 100644
--- a/nixos/default.nix
+++ b/nixos/default.nix
@@ -9,8 +9,6 @@ let
     modules = [ configuration ];
   };
 
-  inherit (eval) pkgs;
-
   # This is for `nixos-rebuild build-vm'.
   vmConfig = (import ./lib/eval-config.nix {
     inherit system;
@@ -30,7 +28,7 @@ let
 in
 
 {
-  inherit (eval) config options;
+  inherit (eval) pkgs config options;
 
   system = eval.config.system.build.toplevel;
 
diff --git a/nixos/doc/manual/configuration/ipv4-config.xml b/nixos/doc/manual/configuration/ipv4-config.xml
index 053501b1736d..68238b547d60 100644
--- a/nixos/doc/manual/configuration/ipv4-config.xml
+++ b/nixos/doc/manual/configuration/ipv4-config.xml
@@ -12,7 +12,7 @@ interfaces.  However, you can configure an interface manually as
 follows:
 
 <programlisting>
-networking.interfaces.eth0.ip4 = [ { address = "192.168.1.2"; prefixLength = 24; } ];
+networking.interfaces.eth0.ipv4.addresses = [ { address = "192.168.1.2"; prefixLength = 24; } ];
 </programlisting>
 
 Typically you’ll also want to set a default gateway and set of name
diff --git a/nixos/doc/manual/configuration/ipv6-config.xml b/nixos/doc/manual/configuration/ipv6-config.xml
index 6d9e0a164e9e..74a21e18ec3f 100644
--- a/nixos/doc/manual/configuration/ipv6-config.xml
+++ b/nixos/doc/manual/configuration/ipv6-config.xml
@@ -26,7 +26,7 @@ boot.kernel.sysctl."net.ipv6.conf.eth0.disable_ipv6" = true;
 DHCPv6. You can configure an interface manually:
 
 <programlisting>
-networking.interfaces.eth0.ip6 = [ { address = "fe00:aa:bb:cc::2"; prefixLength = 64; } ];
+networking.interfaces.eth0.ipv6.addresses = [ { address = "fe00:aa:bb:cc::2"; prefixLength = 64; } ];
 </programlisting>
 </para>
 
diff --git a/nixos/doc/manual/configuration/xfce.xml b/nixos/doc/manual/configuration/xfce.xml
index 21c7a85e19cc..18804d2c08be 100644
--- a/nixos/doc/manual/configuration/xfce.xml
+++ b/nixos/doc/manual/configuration/xfce.xml
@@ -35,18 +35,7 @@ services.compton = {
         To install them manually (system wide), put them into your
         <literal>environment.systemPackages</literal>.
     </para>
-
-    <para>
-        NixOS’s default <emphasis>display manager</emphasis> is SLiM.
-        (DM is the program that provides a graphical login prompt
-         and manages the X server.)
-        You can, for example, select KDE’s
-        <command>sddm</command> instead:
-        <programlisting>
-services.xserver.displayManager.sddm.enable = true;
-        </programlisting>
-    </para>
-
+         
     <simplesect>
         <title>Thunar Volume Support</title>
 
diff --git a/nixos/doc/manual/default.nix b/nixos/doc/manual/default.nix
index 8079a2feb29f..6098b057a370 100644
--- a/nixos/doc/manual/default.nix
+++ b/nixos/doc/manual/default.nix
@@ -6,7 +6,7 @@ let
   lib = pkgs.lib;
 
   # Remove invisible and internal options.
-  optionsList = lib.filter (opt: opt.visible && !opt.internal) (lib.optionAttrSetToDocList options);
+  optionsListVisible = lib.filter (opt: opt.visible && !opt.internal) (lib.optionAttrSetToDocList options);
 
   # Replace functions by the string <function>
   substFunction = x:
@@ -15,13 +15,43 @@ let
     else if lib.isFunction x then "<function>"
     else x;
 
-  # Clean up declaration sites to not refer to the NixOS source tree.
-  optionsList' = lib.flip map optionsList (opt: opt // {
+  # Generate DocBook documentation for a list of packages. This is
+  # what `relatedPackages` option of `mkOption` from
+  # ../../../lib/options.nix influences.
+  #
+  # Each element of `relatedPackages` can be either
+  # - a string:  that will be interpreted as an attribute name from `pkgs`,
+  # - a list:    that will be interpreted as an attribute path from `pkgs`,
+  # - an attrset: that can specify `name`, `path`, `package`, `comment`
+  #   (either of `name`, `path` is required, the rest are optional).
+  genRelatedPackages = packages:
+    let
+      unpack = p: if lib.isString p then { name = p; }
+                  else if lib.isList p then { path = p; }
+                  else p;
+      describe = args:
+        let
+          name = args.name or (lib.concatStringsSep "." args.path);
+          path = args.path or [ args.name ];
+          package = args.package or (lib.attrByPath path (throw "Invalid package attribute path `${toString path}'") pkgs);
+        in "<listitem>"
+        + "<para><literal>pkgs.${name} (${package.meta.name})</literal>"
+        + lib.optionalString (!package.meta.available) " <emphasis>[UNAVAILABLE]</emphasis>"
+        + ": ${package.meta.description or "???"}.</para>"
+        + lib.optionalString (args ? comment) "\n<para>${args.comment}</para>"
+        # Lots of `longDescription's break DocBook, so we just wrap them into <programlisting>
+        + lib.optionalString (package.meta ? longDescription) "\n<programlisting>${package.meta.longDescription}</programlisting>"
+        + "</listitem>";
+    in "<itemizedlist>${lib.concatStringsSep "\n" (map (p: describe (unpack p)) packages)}</itemizedlist>";
+
+  optionsListDesc = lib.flip map optionsListVisible (opt: opt // {
+    # Clean up declaration sites to not refer to the NixOS source tree.
     declarations = map stripAnyPrefixes opt.declarations;
   }
   // lib.optionalAttrs (opt ? example) { example = substFunction opt.example; }
   // lib.optionalAttrs (opt ? default) { default = substFunction opt.default; }
-  // lib.optionalAttrs (opt ? type) { type = substFunction opt.type; });
+  // lib.optionalAttrs (opt ? type) { type = substFunction opt.type; }
+  // lib.optionalAttrs (opt ? relatedPackages) { relatedPackages = genRelatedPackages opt.relatedPackages; });
 
   # We need to strip references to /nix/store/* from options,
   # including any `extraSources` if some modules came from elsewhere,
@@ -32,8 +62,21 @@ let
   prefixesToStrip = map (p: "${toString p}/") ([ ../../.. ] ++ extraSources);
   stripAnyPrefixes = lib.flip (lib.fold lib.removePrefix) prefixesToStrip;
 
+  # Custom "less" that pushes up all the things ending in ".enable*"
+  # and ".package*"
+  optionLess = a: b:
+    let
+      ise = lib.hasPrefix "enable";
+      isp = lib.hasPrefix "package";
+      cmp = lib.splitByAndCompare ise lib.compare
+                                 (lib.splitByAndCompare isp lib.compare lib.compare);
+    in lib.compareLists cmp a.loc b.loc < 0;
+
+  # Customly sort option list for the man page.
+  optionsList = lib.sort optionLess optionsListDesc;
+
   # Convert the list of options into an XML file.
-  optionsXML = builtins.toFile "options.xml" (builtins.toXML optionsList');
+  optionsXML = builtins.toFile "options.xml" (builtins.toXML optionsList);
 
   optionsDocBook = runCommand "options-db.xml" {} ''
     optionsXML=${optionsXML}
@@ -191,7 +234,7 @@ in rec {
       mkdir -p $dst
 
       cp ${builtins.toFile "options.json" (builtins.unsafeDiscardStringContext (builtins.toJSON
-        (builtins.listToAttrs (map (o: { name = o.name; value = removeAttrs o ["name" "visible" "internal"]; }) optionsList'))))
+        (builtins.listToAttrs (map (o: { name = o.name; value = removeAttrs o ["name" "visible" "internal"]; }) optionsList))))
       } $dst/options.json
 
       mkdir -p $out/nix-support
diff --git a/nixos/doc/manual/installation/changing-config.xml b/nixos/doc/manual/installation/changing-config.xml
index 75df307a1b7c..4db9020b9606 100644
--- a/nixos/doc/manual/installation/changing-config.xml
+++ b/nixos/doc/manual/installation/changing-config.xml
@@ -70,9 +70,21 @@ $ ./result/bin/run-*-vm
 </screen>
 
 The VM does not have any data from your host system, so your existing
-user accounts and home directories will not be available.  You can
-forward ports on the host to the guest.  For instance, the following
-will forward host port 2222 to guest port 22 (SSH):
+user accounts and home directories will not be available unless you
+have set <literal>mutableUsers = false</literal>.  Another way is to
+temporarily add the following to your configuration:
+
+<screen>
+users.extraUsers.your-user.initialPassword = "test"  
+</screen>
+
+<emphasis>Important:</emphasis> delete the $hostname.qcow2 file if you
+have started the virtual machine at least once without the right
+users, otherwise the changes will not get picked up.
+
+You can forward ports on the host to the guest.  For
+instance, the following will forward host port 2222 to guest port 22
+(SSH):
 
 <screen>
 $ QEMU_NET_OPTS="hostfwd=tcp::2222-:22" ./result/bin/run-*-vm
diff --git a/nixos/doc/manual/installation/installing.xml b/nixos/doc/manual/installation/installing.xml
index d4746f2eb3a8..2a5d1fc3ce8d 100644
--- a/nixos/doc/manual/installation/installing.xml
+++ b/nixos/doc/manual/installation/installing.xml
@@ -275,11 +275,20 @@ Enter new UNIX password: ***
 Retype new UNIX password: ***
 </screen>
 
+    <note>
+      <para>
+        To prevent the password prompt, set <code>users.mutableUsers = false;</code> in
+        <filename>configuration.nix</filename>, which allows unattended installation
+        necessary in automation.
+      </para>
+    </note>
+
     </para>
 
   </listitem>
 
-  <listitem><para>If everything went well:
+  <listitem>
+    <para>If everything went well:
 
 <screen>
 # reboot</screen>
diff --git a/nixos/doc/manual/options-to-docbook.xsl b/nixos/doc/manual/options-to-docbook.xsl
index 5387546b5982..7b45b233ab2a 100644
--- a/nixos/doc/manual/options-to-docbook.xsl
+++ b/nixos/doc/manual/options-to-docbook.xsl
@@ -70,6 +70,15 @@
                 </para>
               </xsl:if>
 
+              <xsl:if test="attr[@name = 'relatedPackages']">
+                <para>
+                  <emphasis>Related packages:</emphasis>
+                  <xsl:text> </xsl:text>
+                  <xsl:value-of disable-output-escaping="yes"
+                                select="attr[@name = 'relatedPackages']/string/@value" />
+                </para>
+              </xsl:if>
+
               <xsl:if test="count(attr[@name = 'declarations']/list/*) != 0">
                 <para>
                   <emphasis>Declared by:</emphasis>
diff --git a/nixos/doc/manual/release-notes/rl-1803.xml b/nixos/doc/manual/release-notes/rl-1803.xml
index 8391c550afab..ce58c4dc95b0 100644
--- a/nixos/doc/manual/release-notes/rl-1803.xml
+++ b/nixos/doc/manual/release-notes/rl-1803.xml
@@ -38,6 +38,16 @@ has the following highlights: </para>
       </itemizedlist>
     </para>
   </listitem>
+
+  <listitem>
+    <para>
+      The GNOME version is now 3.26.
+    </para>
+  </listitem>
+
+  <listitem>
+    <para>PHP now defaults to PHP 7.2</para>
+  </listitem>
 </itemizedlist>
 
 </section>
@@ -135,6 +145,17 @@ following incompatible changes:</para>
   </listitem>
   <listitem>
     <para>
+      The <literal>openssh</literal> package
+      now includes Kerberos support by default;
+      the <literal>openssh_with_kerberos</literal> package
+      is now a deprecated alias.
+      If you do not want Kerberos support,
+      you can do <literal>openssh.override { withKerboros = false; }</literal>.
+      Note, this also applies to the <literal>openssh_hpn</literal> package.
+    </para>
+  </listitem>
+  <listitem>
+    <para>
       <literal>cc-wrapper</literal> has been split in two; there is now also a <literal>bintools-wrapper</literal>.
       The most commonly used files in <filename>nix-support</filename> are now split between the two wrappers.
       Some commonly used ones, like <filename>nix-support/dynamic-linker</filename>, are duplicated for backwards compatability, even though they rightly belong only in <literal>bintools-wrapper</literal>.
@@ -196,6 +217,28 @@ following incompatible changes:</para>
       </listitem>
     </itemizedlist>
   </listitem>
+  <listitem>
+    <para>
+      The <literal>jid</literal> package has been removed, due to maintenance
+      overhead of a go package having non-versioned dependencies.
+    </para>
+  </listitem>
+  <listitem>
+    <para>
+      When using <option>services.xserver.libinput</option> (enabled by default in GNOME),
+      it now handles all input devices, not just touchpads. As a result, you might need to
+      re-evaluate any custom Xorg configuration. In particular,
+      <literal>Option "XkbRules" "base"</literal> may result in broken keyboard layout.
+    </para>
+  </listitem>
+  <listitem>
+    <para>
+      The <literal>attic</literal> package was removed. A maintained fork called
+      <link xlink:href="https://www.borgbackup.org/">Borg</link> should be used instead.
+      Migration instructions can be found
+      <link xlink:href="http://borgbackup.readthedocs.io/en/stable/usage/upgrade.html#attic-and-borg-0-xx-to-borg-1-x">here</link>.
+    </para>
+  </listitem>
 </itemizedlist>
 
 </section>
@@ -226,10 +269,42 @@ following incompatible changes:</para>
   </listitem>
   <listitem>
     <para>
-      The option <option>services.xserver.desktopManager.default</option> is now <literal>none</literal> by default.
-      An assertion failure is thrown if WM's and DM's default are <literal>none</literal>.
-      To explicitly run a plain X session without and DM or WM, the newly introduced option <option>services.xserver.plainX</option>
-      must be set to true.
+      In the module <option>networking.interfaces.&lt;name&gt;</option> the
+      following options have been removed:
+      <itemizedlist>
+        <listitem>
+          <para><option>ipAddress</option></para>
+        </listitem>
+        <listitem>
+          <para><option>ipv6Address</option></para>
+        </listitem>
+        <listitem>
+          <para><option>prefixLength</option></para>
+        </listitem>
+        <listitem>
+          <para><option>ipv6PrefixLength</option></para>
+        </listitem>
+        <listitem>
+          <para><option>subnetMask</option></para>
+        </listitem>
+      </itemizedlist>
+      To assign static addresses to an interface the options
+      <option>ipv4.addresses</option> and <option>ipv6.addresses</option>
+      should be used instead.
+      The options <option>ip4</option> and <option>ip6</option> have been
+      renamed to <option>ipv4.addresses</option> <option>ipv6.addresses</option>
+      respectively.
+      The new options <option>ipv4.routes</option> and <option>ipv6.routes</option>
+      have been added to set up static routing.
+    </para>
+  </listitem>
+  <listitem>
+    <para>
+      The option <option>services.xserver.desktopManager.default</option> is now
+      <literal>none</literal> by default. An assertion failure is thrown if WM's
+      and DM's default are <literal>none</literal>.
+      To explicitly run a plain X session without and DM or WM, the newly
+      introduced option <option>services.xserver.plainX</option> must be set to true.
     </para>
   </listitem>
   <listitem>
diff --git a/nixos/lib/build-vms.nix b/nixos/lib/build-vms.nix
index 4685fe6914a2..e14105f5f011 100644
--- a/nixos/lib/build-vms.nix
+++ b/nixos/lib/build-vms.nix
@@ -51,7 +51,7 @@ rec {
             let
               interfacesNumbered = zipLists config.virtualisation.vlans (range 1 255);
               interfaces = flip map interfacesNumbered ({ fst, snd }:
-                nameValuePair "eth${toString snd}" { ip4 =
+                nameValuePair "eth${toString snd}" { ipv4.addresses =
                   [ { address = "192.168.${toString fst}.${toString m.snd}";
                       prefixLength = 24;
                   } ];
@@ -64,7 +64,7 @@ rec {
                   networking.interfaces = listToAttrs interfaces;
 
                   networking.primaryIPAddress =
-                    optionalString (interfaces != []) (head (head interfaces).value.ip4).address;
+                    optionalString (interfaces != []) (head (head interfaces).value.ipv4.addresses).address;
 
                   # Put the IP addresses of all VMs in this machine's
                   # /etc/hosts file.  If a machine has multiple
diff --git a/nixos/lib/make-disk-image.nix b/nixos/lib/make-disk-image.nix
index 6269e4279380..4da863469032 100644
--- a/nixos/lib/make-disk-image.nix
+++ b/nixos/lib/make-disk-image.nix
@@ -85,7 +85,7 @@ let format' = format; in let
   nixpkgs = cleanSource pkgs.path;
 
   # FIXME: merge with channel.nix / make-channel.nix.
-  channelSources = pkgs.runCommand "nixos-${config.system.nixosVersion}" {} ''
+  channelSources = pkgs.runCommand "nixos-${config.system.nixos.version}" {} ''
     mkdir -p $out
     cp -prd ${nixpkgs} $out/nixos
     chmod -R u+w $out/nixos
@@ -93,7 +93,7 @@ let format' = format; in let
       ln -s . $out/nixos/nixpkgs
     fi
     rm -rf $out/nixos/.git
-    echo -n ${config.system.nixosVersionSuffix} > $out/nixos/.version-suffix
+    echo -n ${config.system.nixos.versionSuffix} > $out/nixos/.version-suffix
   '';
 
   binPath = with pkgs; makeBinPath (
diff --git a/nixos/lib/testing.nix b/nixos/lib/testing.nix
index cf213d906f58..efcafbaa5554 100644
--- a/nixos/lib/testing.nix
+++ b/nixos/lib/testing.nix
@@ -29,7 +29,7 @@ rec {
         cp ${./test-driver/Logger.pm} $libDir/Logger.pm
 
         wrapProgram $out/bin/nixos-test-driver \
-          --prefix PATH : "${lib.makeBinPath [ qemu vde2 netpbm coreutils ]}" \
+          --prefix PATH : "${lib.makeBinPath [ qemu_test vde2 netpbm coreutils ]}" \
           --prefix PERL5LIB : "${with perlPackages; lib.makePerlPath [ TermReadLineGnu XMLWriter IOTty FileSlurp ]}:$out/lib/perl5/site_perl"
       '';
   };
@@ -78,7 +78,19 @@ rec {
     } @ t:
 
     let
-      testDriverName = "nixos-test-driver-${name}";
+      # A standard store path to the vm monitor is built like this:
+      #   /tmp/nix-build-vm-test-run-$name.drv-0/vm-state-machine/monitor
+      # The max filename length of a unix domain socket is 108 bytes.
+      # This means $name can at most be 50 bytes long.
+      maxTestNameLen = 50;
+      testNameLen = builtins.stringLength name;
+
+      testDriverName = with builtins;
+        if testNameLen > maxTestNameLen then
+          abort ("The name of the test '${name}' must not be longer than ${toString maxTestNameLen} " +
+            "it's currently ${toString testNameLen} characters long.")
+        else
+          "nixos-test-driver-${name}";
 
       nodes = buildVirtualNetwork (
         t.nodes or (if t ? machine then { machine = t.machine; } else { }));
diff --git a/nixos/modules/installer/cd-dvd/channel.nix b/nixos/modules/installer/cd-dvd/channel.nix
index ddb00f174d1a..4a1983167957 100644
--- a/nixos/modules/installer/cd-dvd/channel.nix
+++ b/nixos/modules/installer/cd-dvd/channel.nix
@@ -12,7 +12,7 @@ let
   # CD.  These are installed into the "nixos" channel of the root
   # user, as expected by nixos-rebuild/nixos-install. FIXME: merge
   # with make-channel.nix.
-  channelSources = pkgs.runCommand "nixos-${config.system.nixosVersion}"
+  channelSources = pkgs.runCommand "nixos-${config.system.nixos.version}"
     { }
     ''
       mkdir -p $out
@@ -21,7 +21,7 @@ let
       if [ ! -e $out/nixos/nixpkgs ]; then
         ln -s . $out/nixos/nixpkgs
       fi
-      echo -n ${config.system.nixosVersionSuffix} > $out/nixos/.version-suffix
+      echo -n ${config.system.nixos.versionSuffix} > $out/nixos/.version-suffix
     '';
 
 in
diff --git a/nixos/modules/installer/cd-dvd/installation-cd-base.nix b/nixos/modules/installer/cd-dvd/installation-cd-base.nix
index 2569860a098f..756c8751d00e 100644
--- a/nixos/modules/installer/cd-dvd/installation-cd-base.nix
+++ b/nixos/modules/installer/cd-dvd/installation-cd-base.nix
@@ -16,7 +16,7 @@ with lib;
     ];
 
   # ISO naming.
-  isoImage.isoName = "${config.isoImage.isoBaseName}-${config.system.nixosLabel}-${pkgs.stdenv.system}.iso";
+  isoImage.isoName = "${config.isoImage.isoBaseName}-${config.system.nixos.label}-${pkgs.stdenv.system}.iso";
 
   isoImage.volumeID = substring 0 11 "NIXOS_ISO";
 
diff --git a/nixos/modules/installer/cd-dvd/iso-image.nix b/nixos/modules/installer/cd-dvd/iso-image.nix
index bf9db8249f13..e7cbf415a223 100644
--- a/nixos/modules/installer/cd-dvd/iso-image.nix
+++ b/nixos/modules/installer/cd-dvd/iso-image.nix
@@ -39,31 +39,31 @@ let
     DEFAULT boot
 
     LABEL boot
-    MENU LABEL NixOS ${config.system.nixosLabel}${config.isoImage.appendToMenuLabel}
-    LINUX /boot/bzImage
+    MENU LABEL NixOS ${config.system.nixos.label}${config.isoImage.appendToMenuLabel}
+    LINUX /boot/${config.system.boot.loader.kernelFile}
     APPEND init=${config.system.build.toplevel}/init ${toString config.boot.kernelParams}
-    INITRD /boot/initrd
+    INITRD /boot/${config.system.boot.loader.initrdFile}
 
     # A variant to boot with 'nomodeset'
     LABEL boot-nomodeset
-    MENU LABEL NixOS ${config.system.nixosVersion}${config.isoImage.appendToMenuLabel} (nomodeset)
-    LINUX /boot/bzImage
+    MENU LABEL NixOS ${config.system.nixos.label}${config.isoImage.appendToMenuLabel} (nomodeset)
+    LINUX /boot/${config.system.boot.loader.kernelFile}
     APPEND init=${config.system.build.toplevel}/init ${toString config.boot.kernelParams} nomodeset
-    INITRD /boot/initrd
+    INITRD /boot/${config.system.boot.loader.initrdFile}
 
     # A variant to boot with 'copytoram'
     LABEL boot-copytoram
-    MENU LABEL NixOS ${config.system.nixosVersion}${config.isoImage.appendToMenuLabel} (copytoram)
-    LINUX /boot/bzImage
+    MENU LABEL NixOS ${config.system.nixos.label}${config.isoImage.appendToMenuLabel} (copytoram)
+    LINUX /boot/${config.system.boot.loader.kernelFile}
     APPEND init=${config.system.build.toplevel}/init ${toString config.boot.kernelParams} copytoram
-    INITRD /boot/initrd
+    INITRD /boot/${config.system.boot.loader.initrdFile}
 
     # A variant to boot with verbose logging to the console
     LABEL boot-nomodeset
-    MENU LABEL NixOS ${config.system.nixosVersion}${config.isoImage.appendToMenuLabel} (debug)
-    LINUX /boot/bzImage
+    MENU LABEL NixOS ${config.system.nixos.label}${config.isoImage.appendToMenuLabel} (debug)
+    LINUX /boot/${config.system.boot.loader.kernelFile}
     APPEND init=${config.system.build.toplevel}/init ${toString config.boot.kernelParams} loglevel=7
-    INITRD /boot/initrd
+    INITRD /boot/${config.system.boot.loader.initrdFile}
   '';
 
   isolinuxMemtest86Entry = ''
@@ -82,35 +82,35 @@ let
     mkdir -p $out/loader/entries
 
     cat << EOF > $out/loader/entries/nixos-iso.conf
-    title NixOS ${config.system.nixosVersion}${config.isoImage.appendToMenuLabel}
-    linux /boot/bzImage
-    initrd /boot/initrd
+    title NixOS ${config.system.nixos.label}${config.isoImage.appendToMenuLabel}
+    linux /boot/${config.system.boot.loader.kernelFile}
+    initrd /boot/${config.system.boot.loader.initrdFile}
     options init=${config.system.build.toplevel}/init ${toString config.boot.kernelParams}
     EOF
 
     # A variant to boot with 'nomodeset'
     cat << EOF > $out/loader/entries/nixos-iso-nomodeset.conf
-    title NixOS ${config.system.nixosVersion}${config.isoImage.appendToMenuLabel}
+    title NixOS ${config.system.nixos.label}${config.isoImage.appendToMenuLabel}
     version nomodeset
-    linux /boot/bzImage
-    initrd /boot/initrd
+    linux /boot/${config.system.boot.loader.kernelFile}
+    initrd /boot/${config.system.boot.loader.initrdFile}
     options init=${config.system.build.toplevel}/init ${toString config.boot.kernelParams} nomodeset
     EOF
 
     # A variant to boot with 'copytoram'
     cat << EOF > $out/loader/entries/nixos-iso-copytoram.conf
-    title NixOS ${config.system.nixosVersion}${config.isoImage.appendToMenuLabel}
+    title NixOS ${config.system.nixos.label}${config.isoImage.appendToMenuLabel}
     version copytoram
-    linux /boot/bzImage
-    initrd /boot/initrd
+    linux /boot/${config.system.boot.loader.kernelFile}
+    initrd /boot/${config.system.boot.loader.initrdFile}
     options init=${config.system.build.toplevel}/init ${toString config.boot.kernelParams} copytoram
     EOF
 
     # A variant to boot with verbose logging to the console
     cat << EOF > $out/loader/entries/nixos-iso-debug.conf
-    title NixOS ${config.system.nixosVersion}${config.isoImage.appendToMenuLabel} (debug)
-    linux /boot/bzImage
-    initrd /boot/initrd
+    title NixOS ${config.system.nixos.label}${config.isoImage.appendToMenuLabel} (debug)
+    linux /boot/${config.system.boot.loader.kernelFile}
+    initrd /boot/${config.system.boot.loader.initrdFile}
     options init=${config.system.build.toplevel}/init ${toString config.boot.kernelParams} loglevel=7
     EOF
 
@@ -127,8 +127,8 @@ let
       mkdir ./contents && cd ./contents
       cp -rp "${efiDir}"/* .
       mkdir ./boot
-      cp -p "${config.boot.kernelPackages.kernel}/bzImage" \
-        "${config.system.build.initialRamdisk}/initrd" ./boot/
+      cp -p "${config.boot.kernelPackages.kernel}/${config.system.boot.loader.kernelFile}" \
+        "${config.system.build.initialRamdisk}/${config.system.boot.loader.initrdFile}" ./boot/
       touch --date=@0 ./*
 
       usage_size=$(du -sb --apparent-size . | tr -cd '[:digit:]')
@@ -345,11 +345,11 @@ in
           };
           target = "/isolinux/isolinux.cfg";
         }
-        { source = config.boot.kernelPackages.kernel + "/bzImage";
-          target = "/boot/bzImage";
+        { source = config.boot.kernelPackages.kernel + "/" + config.system.boot.loader.kernelFile;
+          target = "/boot/" + config.system.boot.loader.kernelFile;
         }
-        { source = config.system.build.initialRamdisk + "/initrd";
-          target = "/boot/initrd";
+        { source = config.system.build.initialRamdisk + "/" + config.system.boot.loader.initrdFile;
+          target = "/boot/" + config.system.boot.loader.initrdFile;
         }
         { source = config.system.build.squashfsStore;
           target = "/nix-store.squashfs";
@@ -360,7 +360,7 @@ in
         { source = config.isoImage.splashImage;
           target = "/isolinux/background.png";
         }
-        { source = pkgs.writeText "version" config.system.nixosVersion;
+        { source = pkgs.writeText "version" config.system.nixos.label;
           target = "/version.txt";
         }
       ] ++ optionals config.isoImage.makeEfiBootable [
diff --git a/nixos/modules/installer/cd-dvd/sd-image-armv7l-multiplatform.nix b/nixos/modules/installer/cd-dvd/sd-image-armv7l-multiplatform.nix
index f23275bc16d5..08903ba397a1 100644
--- a/nixos/modules/installer/cd-dvd/sd-image-armv7l-multiplatform.nix
+++ b/nixos/modules/installer/cd-dvd/sd-image-armv7l-multiplatform.nix
@@ -43,11 +43,18 @@ in
   sdImage = {
     populateBootCommands = let
       configTxt = pkgs.writeText "config.txt" ''
+        # Prevent the firmware from smashing the framebuffer setup done by the mainline kernel
+        # when attempting to show low-voltage or overtemperature warnings.
+        avoid_warnings=1
+
         [pi2]
         kernel=u-boot-rpi2.bin
 
         [pi3]
         kernel=u-boot-rpi3.bin
+
+        # U-Boot used to need this to work, regardless of whether UART is actually used or not.
+        # TODO: check when/if this can be removed.
         enable_uart=1
       '';
       in ''
diff --git a/nixos/modules/installer/cd-dvd/system-tarball.nix b/nixos/modules/installer/cd-dvd/system-tarball.nix
index 1962a1959ead..e72d4a5b4910 100644
--- a/nixos/modules/installer/cd-dvd/system-tarball.nix
+++ b/nixos/modules/installer/cd-dvd/system-tarball.nix
@@ -8,7 +8,7 @@ with lib;
 
 let
 
-  versionFile = pkgs.writeText "nixos-version" config.system.nixosVersion;
+  versionFile = pkgs.writeText "nixos-label" config.system.nixos.label;
 
 in
 
@@ -58,8 +58,8 @@ in
     # Individual files to be included on the CD, outside of the Nix
     # store on the CD.
     tarball.contents =
-      [ { source = config.system.build.initialRamdisk + "/initrd";
-          target = "/boot/initrd";
+      [ { source = config.system.build.initialRamdisk + "/" + config.system.boot.loader.initrdFile;
+          target = "/boot/" + config.system.boot.loader.initrdFile;
         }
         { source = versionFile;
           target = "/nixos-version.txt";
diff --git a/nixos/modules/installer/tools/nixos-generate-config.pl b/nixos/modules/installer/tools/nixos-generate-config.pl
index 7c737e84de0a..a82ee63fd0cd 100644
--- a/nixos/modules/installer/tools/nixos-generate-config.pl
+++ b/nixos/modules/installer/tools/nixos-generate-config.pl
@@ -625,7 +625,7 @@ $bootLoaderConfig
   # compatible, in order to avoid breaking some software such as database
   # servers. You should change this only after NixOS release notes say you
   # should.
-  system.stateVersion = "${\(qw(@nixosRelease@))}"; # Did you read the comment?
+  system.stateVersion = "${\(qw(@release@))}"; # Did you read the comment?
 
 }
 EOF
diff --git a/nixos/modules/installer/tools/nixos-version.sh b/nixos/modules/installer/tools/nixos-version.sh
index 77a1b458a342..190c49a33ec6 100644
--- a/nixos/modules/installer/tools/nixos-version.sh
+++ b/nixos/modules/installer/tools/nixos-version.sh
@@ -6,9 +6,9 @@ case "$1" in
     exit 1
     ;;
   --hash|--revision)
-    echo "@nixosRevision@"
+    echo "@revision@"
     ;;
   *)
-    echo "@nixosVersion@ (@nixosCodeName@)"
+    echo "@version@ (@codeName@)"
     ;;
 esac
diff --git a/nixos/modules/installer/tools/tools.nix b/nixos/modules/installer/tools/tools.nix
index cdd561b68403..beac9e29d59c 100644
--- a/nixos/modules/installer/tools/tools.nix
+++ b/nixos/modules/installer/tools/tools.nix
@@ -40,7 +40,7 @@ let
     src = ./nixos-generate-config.pl;
     path = [ pkgs.btrfs-progs ];
     perl = "${pkgs.perl}/bin/perl -I${pkgs.perlPackages.FileSlurp}/lib/perl5/site_perl";
-    inherit (config.system) nixosRelease;
+    inherit (config.system.nixos) release;
   };
 
   nixos-option = makeProg {
@@ -51,7 +51,7 @@ let
   nixos-version = makeProg {
     name = "nixos-version";
     src = ./nixos-version.sh;
-    inherit (config.system) nixosVersion nixosCodeName nixosRevision;
+    inherit (config.system.nixos) version codeName revision;
   };
 
   nixos-enter = makeProg {
diff --git a/nixos/modules/misc/ids.nix b/nixos/modules/misc/ids.nix
index 28ed10a5ece6..c0c6a6ef9244 100644
--- a/nixos/modules/misc/ids.nix
+++ b/nixos/modules/misc/ids.nix
@@ -303,6 +303,7 @@
       restya-board = 284;
       mighttpd2 = 285;
       hass = 286;
+      monero = 287;
 
       # When adding a uid, make sure it doesn't match an existing gid. And don't use uids above 399!
 
@@ -574,6 +575,7 @@
       restya-board = 284;
       mighttpd2 = 285;
       hass = 286;
+      monero = 287;
 
       # When adding a gid, make sure it doesn't match an existing
       # uid. Users and groups with the same name should have equal
diff --git a/nixos/modules/misc/label.nix b/nixos/modules/misc/label.nix
new file mode 100644
index 000000000000..250914e8f82e
--- /dev/null
+++ b/nixos/modules/misc/label.nix
@@ -0,0 +1,72 @@
+{ config, lib, pkgs, ... }:
+
+with lib;
+
+let
+  cfg = config.system.nixos;
+in
+
+{
+
+  options.system = {
+
+    nixos.label = mkOption {
+      type = types.str;
+      description = ''
+        NixOS version name to be used in the names of generated
+        outputs and boot labels.
+
+        If you ever wanted to influence the labels in your GRUB menu,
+        this is the option for you.
+
+        The default is <option>system.nixos.tags</option> separated by
+        "-" + "-" + <envar>NIXOS_LABEL_VERSION</envar> environment
+        variable (defaults to the value of
+        <option>system.nixos.version</option>).
+
+        Can be overriden by setting <envar>NIXOS_LABEL</envar>.
+
+        Useful for not loosing track of configurations built from different
+        nixos branches/revisions, e.g.:
+
+        <screen>
+        #!/bin/sh
+        today=`date +%Y%m%d`
+        branch=`(cd nixpkgs ; git branch 2>/dev/null | sed -n '/^\* / { s|^\* ||; p; }')`
+        revision=`(cd nixpkgs ; git rev-parse HEAD)`
+        export NIXOS_LABEL_VERSION="$today.$branch-''${revision:0:7}"
+        nixos-rebuild switch</screen>
+      '';
+    };
+
+    nixos.tags = mkOption {
+      type = types.listOf types.str;
+      default = [];
+      example = [ "with-xen" ];
+      description = ''
+        Strings to prefix to the default
+        <option>system.nixos.label</option>.
+
+        Useful for not loosing track of configurations built with
+        different options, e.g.:
+
+        <screen>
+        {
+          system.nixos.tags = [ "with-xen" ];
+          virtualisation.xen.enable = true;
+        }
+        </screen>
+      '';
+    };
+
+  };
+
+  config = {
+    # This is set here rather than up there so that changing it would
+    # not rebuild the manual
+    system.nixos.label = mkDefault (maybeEnv "NIXOS_LABEL"
+                                             (concatStringsSep "-" (sort (x: y: x < y) cfg.tags)
+                                             + "-" + maybeEnv "NIXOS_LABEL_VERSION" cfg.version));
+  };
+
+}
diff --git a/nixos/modules/misc/nixpkgs.nix b/nixos/modules/misc/nixpkgs.nix
index c3e7ab9a666a..e747fbc6755c 100644
--- a/nixos/modules/misc/nixpkgs.nix
+++ b/nixos/modules/misc/nixpkgs.nix
@@ -3,6 +3,8 @@
 with lib;
 
 let
+  cfg = config.nixpkgs;
+
   isConfig = x:
     builtins.isAttrs x || lib.isFunction x;
 
@@ -42,12 +44,51 @@ let
     merge = lib.mergeOneOption;
   };
 
-  _pkgs = import ../../.. config.nixpkgs;
+  pkgsType = mkOptionType {
+    name = "nixpkgs";
+    description = "An evaluation of Nixpkgs; the top level attribute set of packages";
+    check = builtins.isAttrs;
+  };
 
 in
 
 {
   options.nixpkgs = {
+
+    pkgs = mkOption {
+      defaultText = literalExample
+        ''import "''${nixos}/.." {
+            inherit (config.nixpkgs) config overlays system;
+          }
+        '';
+      default = import ../../.. { inherit (cfg) config overlays system; };
+      type = pkgsType;
+      example = literalExample ''import <nixpkgs> {}'';
+      description = ''
+        This is the evaluation of Nixpkgs that will be provided to
+        all NixOS modules. Defining this option has the effect of
+        ignoring the other options that would otherwise be used to
+        evaluate Nixpkgs, because those are arguments to the default
+        value. The default value imports the Nixpkgs source files
+        relative to the location of this NixOS module, because
+        NixOS and Nixpkgs are distributed together for consistency,
+        so the <code>nixos</code> in the default value is in fact a
+        relative path. The <code>config</code>, <code>overlays</code>
+        and <code>system</code> come from this option's siblings.
+
+        This option can be used by applications like NixOps to increase
+        the performance of evaluation, or to create packages that depend
+        on a container that should be built with the exact same evaluation
+        of Nixpkgs, for example. Applications like this should set
+        their default value using <code>lib.mkDefault</code>, so
+        user-provided configuration can override it without using
+        <code>lib</code>.
+
+        Note that using a distinct version of Nixpkgs with NixOS may
+        be an unexpected source of problems. Use this option with care.
+      '';
+    };
+
     config = mkOption {
       default = {};
       example = literalExample
@@ -59,6 +100,8 @@ in
         The configuration of the Nix Packages collection.  (For
         details, see the Nixpkgs documentation.)  It allows you to set
         package configuration options.
+
+        Ignored when <code>nixpkgs.pkgs</code> is set.
       '';
     };
 
@@ -82,6 +125,8 @@ in
         takes as an argument the <emphasis>original</emphasis> Nixpkgs.
         The first argument should be used for finding dependencies, and
         the second should be used for overriding recipes.
+
+        Ignored when <code>nixpkgs.pkgs</code> is set.
       '';
     };
 
@@ -93,14 +138,16 @@ in
         If unset, it defaults to the platform type of your host system.
         Specifying this option is useful when doing distributed
         multi-platform deployment, or when building virtual machines.
+
+        Ignored when <code>nixpkgs.pkgs</code> is set.
       '';
     };
   };
 
   config = {
     _module.args = {
-      pkgs = _pkgs;
-      pkgs_i686 = _pkgs.pkgsi686Linux;
+      pkgs = cfg.pkgs;
+      pkgs_i686 = cfg.pkgs.pkgsi686Linux;
     };
   };
 }
diff --git a/nixos/modules/misc/version.nix b/nixos/modules/misc/version.nix
index 48cde2ebbc8a..6af584250a70 100644
--- a/nixos/modules/misc/version.nix
+++ b/nixos/modules/misc/version.nix
@@ -3,7 +3,7 @@
 with lib;
 
 let
-  cfg = config.system;
+  cfg = config.system.nixos;
 
   releaseFile  = "${toString pkgs.path}/.version";
   suffixFile   = "${toString pkgs.path}/.version-suffix";
@@ -16,51 +16,27 @@ in
 
   options.system = {
 
-    stateVersion = mkOption {
-      type = types.str;
-      default = cfg.nixosRelease;
-      description = ''
-        Every once in a while, a new NixOS release may change
-        configuration defaults in a way incompatible with stateful
-        data. For instance, if the default version of PostgreSQL
-        changes, the new version will probably be unable to read your
-        existing databases. To prevent such breakage, you can set the
-        value of this option to the NixOS release with which you want
-        to be compatible. The effect is that NixOS will option
-        defaults corresponding to the specified release (such as using
-        an older version of PostgreSQL).
-      '';
-    };
-
-    nixosLabel = mkOption {
-      type = types.str;
-      description = ''
-        Label to be used in the names of generated outputs and boot
-        labels.
-      '';
-    };
-
-    nixosVersion = mkOption {
+    nixos.version = mkOption {
       internal = true;
       type = types.str;
       description = "The full NixOS version (e.g. <literal>16.03.1160.f2d4ee1</literal>).";
     };
 
-    nixosRelease = mkOption {
+    nixos.release = mkOption {
       readOnly = true;
       type = types.str;
       default = fileContents releaseFile;
       description = "The NixOS release (e.g. <literal>16.03</literal>).";
     };
 
-    nixosVersionSuffix = mkOption {
+    nixos.versionSuffix = mkOption {
       internal = true;
       type = types.str;
       default = if pathExists suffixFile then fileContents suffixFile else "pre-git";
       description = "The NixOS version suffix (e.g. <literal>1160.f2d4ee1</literal>).";
     };
 
-    nixosRevision = mkOption {
+    nixos.revision = mkOption {
       internal = true;
       type = types.str;
       default = if pathIsDirectory gitRepo then commitIdFromGitRepo gitRepo
@@ -69,12 +45,28 @@ in
       description = "The Git revision from which this NixOS configuration was built.";
     };
 
-    nixosCodeName = mkOption {
+    nixos.codeName = mkOption {
       readOnly = true;
       type = types.str;
       description = "The NixOS release code name (e.g. <literal>Emu</literal>).";
     };
 
+    stateVersion = mkOption {
+      type = types.str;
+      default = cfg.release;
+      description = ''
+        Every once in a while, a new NixOS release may change
+        configuration defaults in a way incompatible with stateful
+        data. For instance, if the default version of PostgreSQL
+        changes, the new version will probably be unable to read your
+        existing databases. To prevent such breakage, you can set the
+        value of this option to the NixOS release with which you want
+        to be compatible. The effect is that NixOS will option
+        defaults corresponding to the specified release (such as using
+        an older version of PostgreSQL).
+      '';
+    };
+
     defaultChannel = mkOption {
       internal = true;
       type = types.str;
@@ -86,16 +78,15 @@ in
 
   config = {
 
-    system = {
+    system.nixos = {
       # These defaults are set here rather than up there so that
       # changing them would not rebuild the manual
-      nixosLabel   = mkDefault cfg.nixosVersion;
-      nixosVersion = mkDefault (cfg.nixosRelease + cfg.nixosVersionSuffix);
-      nixosRevision      = mkIf (pathIsDirectory gitRepo) (mkDefault            gitCommitId);
-      nixosVersionSuffix = mkIf (pathIsDirectory gitRepo) (mkDefault (".git." + gitCommitId));
+      version = mkDefault (cfg.release + cfg.versionSuffix);
+      revision      = mkIf (pathIsDirectory gitRepo) (mkDefault            gitCommitId);
+      versionSuffix = mkIf (pathIsDirectory gitRepo) (mkDefault (".git." + gitCommitId));
 
       # Note: code names must only increase in alphabetical order.
-      nixosCodeName = "Impala";
+      codeName = "Impala";
     };
 
     # Generate /etc/os-release.  See
@@ -105,10 +96,10 @@ in
       ''
         NAME=NixOS
         ID=nixos
-        VERSION="${config.system.nixosVersion} (${config.system.nixosCodeName})"
-        VERSION_CODENAME=${toLower config.system.nixosCodeName}
-        VERSION_ID="${config.system.nixosVersion}"
-        PRETTY_NAME="NixOS ${config.system.nixosVersion} (${config.system.nixosCodeName})"
+        VERSION="${cfg.version} (${cfg.codeName})"
+        VERSION_CODENAME=${toLower cfg.codeName}
+        VERSION_ID="${cfg.version}"
+        PRETTY_NAME="NixOS ${cfg.version} (${cfg.codeName})"
         HOME_URL="https://nixos.org/"
         SUPPORT_URL="https://nixos.org/nixos/support.html"
         BUG_REPORT_URL="https://github.com/NixOS/nixpkgs/issues"
diff --git a/nixos/modules/module-list.nix b/nixos/modules/module-list.nix
index 2ec8b28c3fc4..098fac7a0c2d 100644
--- a/nixos/modules/module-list.nix
+++ b/nixos/modules/module-list.nix
@@ -60,6 +60,7 @@
   ./misc/extra-arguments.nix
   ./misc/ids.nix
   ./misc/lib.nix
+  ./misc/label.nix
   ./misc/locate.nix
   ./misc/meta.nix
   ./misc/nixpkgs.nix
@@ -75,6 +76,7 @@
   ./programs/cdemu.nix
   ./programs/chromium.nix
   ./programs/command-not-found/command-not-found.nix
+  ./programs/criu.nix
   ./programs/dconf.nix
   ./programs/environment.nix
   ./programs/fish.nix
@@ -92,6 +94,7 @@
   ./programs/nano.nix
   ./programs/npm.nix
   ./programs/oblogout.nix
+  ./programs/plotinus.nix
   ./programs/qt5ct.nix
   ./programs/rootston.nix
   ./programs/screen.nix
@@ -102,6 +105,7 @@
   ./programs/ssh.nix
   ./programs/ssmtp.nix
   ./programs/sysdig.nix
+  ./programs/systemtap.nix
   ./programs/sway.nix
   ./programs/thefuck.nix
   ./programs/tmux.nix
@@ -111,8 +115,10 @@
   ./programs/wireshark.nix
   ./programs/xfs_quota.nix
   ./programs/xonsh.nix
+  ./programs/yabar.nix
   ./programs/zsh/oh-my-zsh.nix
   ./programs/zsh/zsh.nix
+  ./programs/zsh/zsh-autoenv.nix
   ./programs/zsh/zsh-syntax-highlighting.nix
   ./rename.nix
   ./security/acme.nix
@@ -151,6 +157,7 @@
   ./services/backup/almir.nix
   ./services/backup/bacula.nix
   ./services/backup/crashplan.nix
+  ./services/backup/crashplan-small-business.nix
   ./services/backup/mysql-backup.nix
   ./services/backup/postgresql-backup.nix
   ./services/backup/rsnapshot.nix
@@ -200,6 +207,7 @@
   ./services/desktops/dleyna-renderer.nix
   ./services/desktops/dleyna-server.nix
   ./services/desktops/geoclue2.nix
+  ./services/desktops/pipewire.nix
   ./services/desktops/gnome3/at-spi2-core.nix
   ./services/desktops/gnome3/chrome-gnome-shell.nix
   ./services/desktops/gnome3/evolution-data-server.nix
@@ -238,6 +246,7 @@
   ./services/hardware/pcscd.nix
   ./services/hardware/pommed.nix
   ./services/hardware/sane.nix
+  ./services/hardware/sane_extra_backends/brscan4.nix
   ./services/hardware/tcsd.nix
   ./services/hardware/tlp.nix
   ./services/hardware/thinkfan.nix
@@ -334,6 +343,7 @@
   ./services/misc/nix-optimise.nix
   ./services/misc/nixos-manual.nix
   ./services/misc/nix-ssh-serve.nix
+  ./services/misc/novacomd.nix
   ./services/misc/nzbget.nix
   ./services/misc/octoprint.nix
   ./services/misc/osrm.nix
@@ -417,7 +427,8 @@
   ./services/network-filesystems/ipfs.nix
   ./services/network-filesystems/netatalk.nix
   ./services/network-filesystems/nfsd.nix
-  ./services/network-filesystems/openafs-client/default.nix
+  ./services/network-filesystems/openafs/client.nix
+  ./services/network-filesystems/openafs/server.nix
   ./services/network-filesystems/rsyncd.nix
   ./services/network-filesystems/samba.nix
   ./services/network-filesystems/tahoe.nix
@@ -491,6 +502,7 @@
   ./services/networking/minidlna.nix
   ./services/networking/miniupnpd.nix
   ./services/networking/mosquitto.nix
+  ./services/networking/monero.nix
   ./services/networking/miredo.nix
   ./services/networking/mstpd.nix
   ./services/networking/murmur.nix
@@ -501,6 +513,7 @@
   ./services/networking/ngircd.nix
   ./services/networking/nghttpx/default.nix
   ./services/networking/nix-serve.nix
+  ./services/networking/nixops-dns.nix
   ./services/networking/nntp-proxy.nix
   ./services/networking/nsd.nix
   ./services/networking/ntopng.nix
@@ -528,6 +541,7 @@
   ./services/networking/redsocks.nix
   ./services/networking/resilio.nix
   ./services/networking/rpcbind.nix
+  ./services/networking/rxe.nix
   ./services/networking/sabnzbd.nix
   ./services/networking/searx.nix
   ./services/networking/seeks.nix
@@ -685,6 +699,7 @@
   ./services/x11/xserver.nix
   ./system/activation/activation-script.nix
   ./system/activation/top-level.nix
+  ./system/boot/binfmt.nix
   ./system/boot/coredump.nix
   ./system/boot/emergency-mode.nix
   ./system/boot/grow-partition.nix
diff --git a/nixos/modules/programs/adb.nix b/nixos/modules/programs/adb.nix
index 18290555b79d..f648d70bd9fa 100644
--- a/nixos/modules/programs/adb.nix
+++ b/nixos/modules/programs/adb.nix
@@ -16,6 +16,7 @@ with lib;
           To grant access to a user, it must be part of adbusers group:
           <code>users.extraUsers.alice.extraGroups = ["adbusers"];</code>
         '';
+        relatedPackages = [ ["androidenv" "platformTools"] ];
       };
     };
   };
diff --git a/nixos/modules/programs/criu.nix b/nixos/modules/programs/criu.nix
new file mode 100644
index 000000000000..48cf5c88a9fc
--- /dev/null
+++ b/nixos/modules/programs/criu.nix
@@ -0,0 +1,26 @@
+{ config, lib, pkgs, ... }:
+
+with lib;
+
+let cfg = config.programs.criu;
+in {
+
+  options = {
+    programs.criu = {
+      enable = mkOption {
+        default = false;
+        description = ''
+          Install <command>criu</command> along with necessary kernel options.
+        '';
+      };
+    };
+  };
+  config = mkIf cfg.enable {
+    system.requiredKernelConfig = with config.lib.kernelConfig; [
+      (isYes "CHECKPOINT_RESTORE")
+    ];
+    boot.kernel.features.criu = true;
+    environment.systemPackages = [ pkgs.criu ];
+  };
+
+}
diff --git a/nixos/modules/programs/plotinus.nix b/nixos/modules/programs/plotinus.nix
new file mode 100644
index 000000000000..065e72d6c374
--- /dev/null
+++ b/nixos/modules/programs/plotinus.nix
@@ -0,0 +1,36 @@
+{ config, lib, pkgs, ... }:
+
+with lib;
+
+let
+  cfg = config.programs.plotinus;
+in
+{
+  meta = {
+    maintainers = pkgs.plotinus.meta.maintainers;
+    doc = ./plotinus.xml;
+  };
+
+  ###### interface
+
+  options = {
+    programs.plotinus = {
+      enable = mkOption {
+        default = false;
+        description = ''
+          Whether to enable the Plotinus GTK+3 plugin.  Plotinus provides a
+          popup (triggered by Ctrl-Shift-P) to search the menus of a
+          compatible application.
+        '';
+        type = types.bool;
+      };
+    };
+  };
+
+  ###### implementation
+
+  config = mkIf cfg.enable {
+    environment.variables.XDG_DATA_DIRS = [ "${pkgs.plotinus}/share/gsettings-schemas/${pkgs.plotinus.name}" ];
+    environment.variables.GTK3_MODULES = [ "${pkgs.plotinus}/lib/libplotinus.so" ];
+  };
+}
diff --git a/nixos/modules/programs/plotinus.xml b/nixos/modules/programs/plotinus.xml
new file mode 100644
index 000000000000..85b0e023e6c1
--- /dev/null
+++ b/nixos/modules/programs/plotinus.xml
@@ -0,0 +1,25 @@
+<chapter xmlns="http://docbook.org/ns/docbook"
+         xmlns:xlink="http://www.w3.org/1999/xlink"
+         xmlns:xi="http://www.w3.org/2001/XInclude"
+         version="5.0"
+         xml:id="module-program-plotinus">
+
+<title>Plotinus</title>
+
+<para><emphasis>Source:</emphasis> <filename>modules/programs/plotinus.nix</filename></para>
+
+<para><emphasis>Upstream documentation:</emphasis> <link xlink:href="https://github.com/p-e-w/plotinus"/></para>
+
+<para>Plotinus is a searchable command palette in every modern GTK+ application.</para>
+
+<para>When in a GTK+3 application and Plotinus is enabled, you can press <literal>Ctrl+Shift+P</literal> to open the command palette.  The command palette provides a searchable list of of all menu items in the application.</para>
+
+<para>To enable Plotinus, add the following to your <filename>configuration.nix</filename>:
+
+<programlisting>
+programs.plotinus.enable = true;
+</programlisting>
+
+</para>
+
+</chapter>
diff --git a/nixos/modules/programs/systemtap.nix b/nixos/modules/programs/systemtap.nix
new file mode 100644
index 000000000000..fd84732cd412
--- /dev/null
+++ b/nixos/modules/programs/systemtap.nix
@@ -0,0 +1,28 @@
+{ config, lib, pkgs, ... }:
+
+with lib;
+
+let cfg = config.programs.systemtap;
+in {
+
+  options = {
+    programs.systemtap = {
+      enable = mkOption {
+        default = false;
+        description = ''
+          Install <command>systemtap</command> along with necessary kernel options.
+        '';
+      };
+    };
+  };
+  config = mkIf cfg.enable {
+    system.requiredKernelConfig = with config.lib.kernelConfig; [
+      (isYes "DEBUG")
+    ];
+    boot.kernel.features.debug = true;
+    environment.systemPackages = [
+      config.boot.kernelPackages.systemtap
+    ];
+  };
+
+}
diff --git a/nixos/modules/programs/tmux.nix b/nixos/modules/programs/tmux.nix
index 1eb6fa6bf2fa..4a60403a2827 100644
--- a/nixos/modules/programs/tmux.nix
+++ b/nixos/modules/programs/tmux.nix
@@ -61,7 +61,12 @@ in {
   options = {
     programs.tmux = {
 
-      enable = mkEnableOption "<command>tmux</command> - a <command>screen</command> replacement.";
+      enable = mkOption {
+        type = types.bool;
+        default = false;
+        description = "Whenever to configure <command>tmux</command> system-wide.";
+        relatedPackages = [ "tmux" ];
+      };
 
       aggressiveResize = mkOption {
         default = false;
diff --git a/nixos/modules/programs/yabar.nix b/nixos/modules/programs/yabar.nix
new file mode 100644
index 000000000000..a01083c3ace9
--- /dev/null
+++ b/nixos/modules/programs/yabar.nix
@@ -0,0 +1,149 @@
+{ lib, pkgs, config, ... }:
+
+with lib;
+
+let
+  cfg = config.programs.yabar;
+
+  mapExtra = v: lib.concatStringsSep "\n" (mapAttrsToList (
+    key: val: "${key} = ${if (isString val) then "\"${val}\"" else "${builtins.toString val}"};"
+  ) v);
+
+  listKeys = r: concatStringsSep "," (map (n: "\"${n}\"") (attrNames r));
+
+  configFile = let
+    bars = mapAttrsToList (
+      name: cfg: ''
+        ${name}: {
+          font: "${cfg.font}";
+          position: "${cfg.position}";
+
+          ${mapExtra cfg.extra}
+
+          block-list: [${listKeys cfg.indicators}]
+
+          ${concatStringsSep "\n" (mapAttrsToList (
+            name: cfg: ''
+              ${name}: {
+                exec: "${cfg.exec}";
+                align: "${cfg.align}";
+                ${mapExtra cfg.extra}
+              };
+            ''
+          ) cfg.indicators)}
+        };
+      ''
+    ) cfg.bars;
+  in pkgs.writeText "yabar.conf" ''
+    bar-list = [${listKeys cfg.bars}];
+    ${concatStringsSep "\n" bars}
+  '';
+in
+  {
+    options.programs.yabar = {
+      enable = mkEnableOption "yabar";
+
+      package = mkOption {
+        default = pkgs.yabar;
+        example = literalExample "pkgs.yabar-unstable";
+        type = types.package;
+
+        description = ''
+          The package which contains the `yabar` binary.
+
+          Nixpkgs provides the `yabar` and `yabar-unstable`
+          derivations since 18.03, so it's possible to choose.
+        '';
+      };
+
+      bars = mkOption {
+        default = {};
+        type = types.attrsOf(types.submodule {
+          options = {
+            font = mkOption {
+              default = "sans bold 9";
+              example = "Droid Sans, FontAwesome Bold 9";
+              type = types.string;
+
+              description = ''
+                The font that will be used to draw the status bar.
+              '';
+            };
+
+            position = mkOption {
+              default = "top";
+              example = "bottom";
+              type = types.enum [ "top" "bottom" ];
+
+              description = ''
+                The position where the bar will be rendered.
+              '';
+            };
+
+            extra = mkOption {
+              default = {};
+              type = types.attrsOf types.string;
+
+              description = ''
+                An attribute set which contains further attributes of a bar.
+              '';
+            };
+
+            indicators = mkOption {
+              default = {};
+              type = types.attrsOf(types.submodule {
+                options.exec = mkOption {
+                  example = "YABAR_DATE";
+                  type = types.string;
+                  description = ''
+                     The type of the indicator to be executed.
+                  '';
+                };
+
+                options.align = mkOption {
+                  default = "left";
+                  example = "right";
+                  type = types.enum [ "left" "center" "right" ];
+
+                  description = ''
+                    Whether to align the indicator at the left or right of the bar.
+                  '';
+                };
+
+                options.extra = mkOption {
+                  default = {};
+                  type = types.attrsOf (types.either types.string types.int);
+
+                  description = ''
+                    An attribute set which contains further attributes of a indicator.
+                  '';
+                };
+              });
+
+              description = ''
+                Indicators that should be rendered by yabar.
+              '';
+            };
+          };
+        });
+
+        description = ''
+          List of bars that should be rendered by yabar.
+        '';
+      };
+    };
+
+    config = mkIf cfg.enable {
+      systemd.user.services.yabar = {
+        description = "yabar service";
+        wantedBy = [ "graphical-session.target" ];
+        partOf = [ "graphical-session.target" ];
+
+        script = ''
+          ${cfg.package}/bin/yabar -c ${configFile}
+        '';
+
+        serviceConfig.Restart = "always";
+      };
+    };
+  }
diff --git a/nixos/modules/programs/zsh/zsh-autoenv.nix b/nixos/modules/programs/zsh/zsh-autoenv.nix
new file mode 100644
index 000000000000..630114bcda9f
--- /dev/null
+++ b/nixos/modules/programs/zsh/zsh-autoenv.nix
@@ -0,0 +1,28 @@
+{ config, lib, pkgs, ... }:
+
+with lib;
+
+let
+  cfg = config.programs.zsh.zsh-autoenv;
+in {
+  options = {
+    programs.zsh.zsh-autoenv = {
+      enable = mkEnableOption "zsh-autoenv";
+      package = mkOption {
+        default = pkgs.zsh-autoenv;
+        defaultText = "pkgs.zsh-autoenv";
+        description = ''
+          Package to install for `zsh-autoenv` usage.
+        '';
+
+        type = types.package;
+      };
+    };
+  };
+
+  config = mkIf cfg.enable {
+    programs.zsh.interactiveShellInit = ''
+      source ${cfg.package}/share/zsh-autoenv/autoenv.zsh
+    '';
+  };
+}
diff --git a/nixos/modules/rename.nix b/nixos/modules/rename.nix
index 562be13a3f64..da83baed3719 100644
--- a/nixos/modules/rename.nix
+++ b/nixos/modules/rename.nix
@@ -189,6 +189,14 @@ with lib;
     # Profile splitting
     (mkRenamedOptionModule [ "virtualization" "growPartition" ] [ "boot" "growPartition" ])
 
+    # misc/version.nix
+    (mkRenamedOptionModule [ "config" "system" "nixosVersion" ] [ "config" "system" "nixos" "version" ])
+    (mkRenamedOptionModule [ "config" "system" "nixosRelease" ] [ "config" "system" "nixos" "release" ])
+    (mkRenamedOptionModule [ "config" "system" "nixosVersionSuffix" ] [ "config" "system" "nixos" "versionSuffix" ])
+    (mkRenamedOptionModule [ "config" "system" "nixosRevision" ] [ "config" "system" "nixos" "revision" ])
+    (mkRenamedOptionModule [ "config" "system" "nixosCodeName" ] [ "config" "system" "nixos" "codeName" ])
+    (mkRenamedOptionModule [ "config" "system" "nixosLabel" ] [ "config" "system" "nixos" "label" ])
+
     # Options that are obsolete and have no replacement.
     (mkRemovedOptionModule [ "boot" "initrd" "luks" "enable" ] "")
     (mkRemovedOptionModule [ "programs" "bash" "enable" ] "")
@@ -205,11 +213,14 @@ with lib;
       "See the 16.09 release notes for more information.")
     (mkRemovedOptionModule [ "services" "phpfpm" "phpIni" ] "")
     (mkRemovedOptionModule [ "services" "dovecot2" "package" ] "")
+    (mkRemovedOptionModule [ "services" "firefox" "syncserver" "user" ] "")
+    (mkRemovedOptionModule [ "services" "firefox" "syncserver" "group" ] "")
     (mkRemovedOptionModule [ "fonts" "fontconfig" "hinting" "style" ] "")
     (mkRemovedOptionModule [ "services" "xserver" "displayManager" "sddm" "themes" ]
       "Set the option `services.xserver.displayManager.sddm.package' instead.")
     (mkRemovedOptionModule [ "fonts" "fontconfig" "forceAutohint" ] "")
     (mkRemovedOptionModule [ "fonts" "fontconfig" "renderMonoTTFAsBitmap" ] "")
+    (mkRemovedOptionModule [ "virtualisation" "xen" "qemu" ] "You don't need this option anymore, it will work without it.")
 
     # ZSH
     (mkRenamedOptionModule [ "programs" "zsh" "enableSyntaxHighlighting" ] [ "programs" "zsh" "syntaxHighlighting" "enable" ])
@@ -220,5 +231,8 @@ with lib;
     (mkRenamedOptionModule [ "programs" "zsh" "oh-my-zsh" "theme" ] [ "programs" "zsh" "ohMyZsh" "theme" ])
     (mkRenamedOptionModule [ "programs" "zsh" "oh-my-zsh" "custom" ] [ "programs" "zsh" "ohMyZsh" "custom" ])
     (mkRenamedOptionModule [ "programs" "zsh" "oh-my-zsh" "plugins" ] [ "programs" "zsh" "ohMyZsh" "plugins" ])
+
+    # Xen
+    (mkRenamedOptionModule [ "virtualisation" "xen" "qemu-package" ] [ "virtualisation" "xen" "package-qemu" ])
   ];
 }
diff --git a/nixos/modules/security/acme.nix b/nixos/modules/security/acme.nix
index 5940f471883c..0736239ed2cf 100644
--- a/nixos/modules/security/acme.nix
+++ b/nixos/modules/security/acme.nix
@@ -6,10 +6,11 @@ let
 
   cfg = config.security.acme;
 
-  certOpts = { ... }: {
+  certOpts = { name, ... }: {
     options = {
       webroot = mkOption {
         type = types.str;
+        example = "/var/lib/acme/acme-challenges";
         description = ''
           Where the webroot of the HTTP vhost is located.
           <filename>.well-known/acme-challenge/</filename> directory
@@ -20,8 +21,8 @@ let
       };
 
       domain = mkOption {
-        type = types.nullOr types.str;
-        default = null;
+        type = types.str;
+        default = name;
         description = "Domain to fetch certificate for (defaults to the entry name)";
       };
 
@@ -48,7 +49,7 @@ let
         default = false;
         description = ''
           Give read permissions to the specified group
-          (<option>security.acme.group</option>) to read SSL private certificates.
+          (<option>security.acme.cert.&lt;name&gt;.group</option>) to read SSL private certificates.
         '';
       };
 
@@ -87,7 +88,7 @@ let
           }
         '';
         description = ''
-          Extra domain names for which certificates are to be issued, with their
+          A list of extra domain names, which are included in the one certificate to be issued, with their
           own server roots if needed.
         '';
       };
@@ -193,10 +194,9 @@ in
           servicesLists = mapAttrsToList certToServices cfg.certs;
           certToServices = cert: data:
               let
-                domain = if data.domain != null then data.domain else cert;
                 cpath = "${cfg.directory}/${cert}";
                 rights = if data.allowKeysForGroup then "750" else "700";
-                cmdline = [ "-v" "-d" domain "--default_root" data.webroot "--valid_min" cfg.validMin "--tos_sha256" cfg.tosHash ]
+                cmdline = [ "-v" "-d" data.domain "--default_root" data.webroot "--valid_min" cfg.validMin "--tos_sha256" cfg.tosHash ]
                           ++ optionals (data.email != null) [ "--email" data.email ]
                           ++ concatMap (p: [ "-f" p ]) data.plugins
                           ++ concatLists (mapAttrsToList (name: root: [ "-d" (if root == null then name else "${name}:${root}")]) data.extraDomains)
diff --git a/nixos/modules/security/pam.nix b/nixos/modules/security/pam.nix
index 3fff9e78aa19..f39f64033ca7 100644
--- a/nixos/modules/security/pam.nix
+++ b/nixos/modules/security/pam.nix
@@ -46,6 +46,18 @@ let
         '';
       };
 
+      googleAuthenticator = {
+        enable = mkOption {
+          default = false;
+          type = types.bool;
+          description = ''
+            If set, users with enabled Google Authenticator (created
+            <filename>~/.google_authenticator</filename>) will be required
+            to provide Google Authenticator token to log in.
+          '';
+        };
+      };
+
       usbAuth = mkOption {
         default = config.security.pam.usb.enable;
         type = types.bool;
@@ -284,7 +296,12 @@ let
           # prompts the user for password so we run it once with 'required' at an
           # earlier point and it will run again with 'sufficient' further down.
           # We use try_first_pass the second time to avoid prompting password twice
-          (optionalString (cfg.unixAuth && (config.security.pam.enableEcryptfs || cfg.pamMount || cfg.enableKwallet || cfg.enableGnomeKeyring)) ''
+          (optionalString (cfg.unixAuth &&
+          (config.security.pam.enableEcryptfs
+            || cfg.pamMount
+            || cfg.enableKwallet
+            || cfg.enableGnomeKeyring
+            || cfg.googleAuthenticator.enable)) ''
               auth required pam_unix.so ${optionalString cfg.allowNullPassword "nullok"} likeauth
               ${optionalString config.security.pam.enableEcryptfs
                 "auth optional ${pkgs.ecryptfs}/lib/security/pam_ecryptfs.so unwrap"}
@@ -295,6 +312,8 @@ let
                  " kwalletd=${pkgs.libsForQt5.kwallet.bin}/bin/kwalletd5")}
               ${optionalString cfg.enableGnomeKeyring
                 ("auth optional ${pkgs.gnome3.gnome_keyring}/lib/security/pam_gnome_keyring.so")}
+              ${optionalString cfg.googleAuthenticator.enable
+                  "auth required ${pkgs.googleAuthenticator}/lib/security/pam_google_authenticator.so no_increment_hotp"}
             '') + ''
           ${optionalString cfg.unixAuth
               "auth sufficient pam_unix.so ${optionalString cfg.allowNullPassword "nullok"} likeauth try_first_pass"}
diff --git a/nixos/modules/services/backup/crashplan-small-business.nix b/nixos/modules/services/backup/crashplan-small-business.nix
new file mode 100644
index 000000000000..9497d8c18bb7
--- /dev/null
+++ b/nixos/modules/services/backup/crashplan-small-business.nix
@@ -0,0 +1,74 @@
+{ config, pkgs, lib, ... }:
+
+let
+  cfg = config.services.crashplansb;
+  crashplansb = pkgs.crashplansb.override { maxRam = cfg.maxRam; };
+  varDir = "/var/lib/crashplan";
+in
+
+with lib;
+
+{
+  options = {
+    services.crashplansb = {
+      enable = mkOption {
+        default = false;
+        type = types.bool;
+        description = ''
+          Starts crashplan for small business background service.
+        '';
+      };
+      maxRam = mkOption {
+        default = "1024m";
+        example = "2G";
+        type = types.str;
+        description = ''
+          Maximum amount of ram that the crashplan engine should use.
+        '';
+      };
+      openPorts = mkOption {
+        description = "Open ports in the firewall for crashplan.";
+        default = true;
+        type = types.bool;
+      };
+      ports =  mkOption {
+        # https://support.code42.com/Administrator/6/Planning_and_installing/TCP_and_UDP_ports_used_by_the_Code42_platform
+        # used ports can also be checked in the desktop app console using the command connection.info
+        description = "which ports to open.";
+        default = [ 4242 4243 4244 4247 ];
+        type = types.listOf types.int;
+      };
+    };
+  };
+
+  config = mkIf cfg.enable {
+    environment.systemPackages = [ crashplansb ];
+    networking.firewall.allowedTCPPorts = mkIf cfg.openPorts cfg.ports;
+
+    systemd.services.crashplansb = {
+      description = "CrashPlan Backup Engine";
+
+      wantedBy = [ "multi-user.target" ];
+      after    = [ "network.target" "local-fs.target" ];
+
+      preStart = ''
+        install -d -m 755 ${crashplansb.vardir}
+        install -d -m 700 ${crashplansb.vardir}/conf
+        install -d -m 700 ${crashplansb.manifestdir}
+        install -d -m 700 ${crashplansb.vardir}/cache
+        install -d -m 700 ${crashplansb.vardir}/backupArchives
+        install -d -m 777 ${crashplansb.vardir}/log
+        cp -avn ${crashplansb}/conf.template/* ${crashplansb.vardir}/conf
+      '';
+
+      serviceConfig = {
+        Type = "forking";
+        EnvironmentFile = "${crashplansb}/bin/run.conf";
+        ExecStart = "${crashplansb}/bin/CrashPlanEngine start";
+        ExecStop = "${crashplansb}/bin/CrashPlanEngine stop";
+        PIDFile = "${crashplansb.vardir}/CrashPlanEngine.pid";
+        WorkingDirectory = crashplansb;
+      };
+    };
+  };
+}
diff --git a/nixos/modules/services/cluster/kubernetes/dashboard.nix b/nixos/modules/services/cluster/kubernetes/dashboard.nix
index 75d71fccfda4..e331889b9dd5 100644
--- a/nixos/modules/services/cluster/kubernetes/dashboard.nix
+++ b/nixos/modules/services/cluster/kubernetes/dashboard.nix
@@ -6,12 +6,12 @@ let
   cfg = config.services.kubernetes.addons.dashboard;
 
   name = "gcr.io/google_containers/kubernetes-dashboard-amd64";
-	version = "v1.6.3";
+	version = "v1.8.2";
 
   image = pkgs.dockerTools.pullImage {
     imageName = name;
     imageTag = version;
-    sha256 = "1sf54d96nkgic9hir9c6p14gw24ns1k5d5a0r1sg414kjrvic0b4";
+    sha256 = "11h0fz3wxp0f10fsyqaxjm7l2qg7xws50dv5iwlck5gb1fjmajad";
   };
 in {
   options.services.kubernetes.addons.dashboard = {
diff --git a/nixos/modules/services/cluster/kubernetes/default.nix b/nixos/modules/services/cluster/kubernetes/default.nix
index 077953e4d4f8..4a2c6f0833eb 100644
--- a/nixos/modules/services/cluster/kubernetes/default.nix
+++ b/nixos/modules/services/cluster/kubernetes/default.nix
@@ -301,8 +301,8 @@ in {
           Kubernetes apiserver authorization mode (AlwaysAllow/AlwaysDeny/ABAC/RBAC). See
           <link xlink:href="http://kubernetes.io/docs/admin/authorization.html"/>
         '';
-        default = ["RBAC"];
-        type = types.listOf (types.enum ["AlwaysAllow" "AlwaysDeny" "ABAC" "RBAC"]);
+        default = ["RBAC" "Node"];
+        type = types.listOf (types.enum ["AlwaysAllow" "AlwaysDeny" "ABAC" "RBAC" "Node"]);
       };
 
       authorizationPolicy = mkOption {
@@ -344,7 +344,7 @@ in {
           Kubernetes admission control plugins to use. See
           <link xlink:href="http://kubernetes.io/docs/admin/admission-controllers/"/>
         '';
-        default = ["NamespaceLifecycle" "LimitRanger" "ServiceAccount" "ResourceQuota" "DefaultStorageClass" "DefaultTolerationSeconds"];
+        default = ["NamespaceLifecycle" "LimitRanger" "ServiceAccount" "ResourceQuota" "DefaultStorageClass" "DefaultTolerationSeconds" "NodeRestriction"];
         example = [
           "NamespaceLifecycle" "NamespaceExists" "LimitRanger"
           "SecurityContextDeny" "ServiceAccount" "ResourceQuota"
diff --git a/nixos/modules/services/computing/slurm/slurm.nix b/nixos/modules/services/computing/slurm/slurm.nix
index fb91a29a4000..45d34f5b76f5 100644
--- a/nixos/modules/services/computing/slurm/slurm.nix
+++ b/nixos/modules/services/computing/slurm/slurm.nix
@@ -6,14 +6,20 @@ let
 
   cfg = config.services.slurm;
   # configuration file can be generated by http://slurm.schedmd.com/configurator.html
-  configFile = pkgs.writeText "slurm.conf" 
+  configFile = pkgs.writeText "slurm.conf"
     ''
       ${optionalString (cfg.controlMachine != null) ''controlMachine=${cfg.controlMachine}''}
       ${optionalString (cfg.controlAddr != null) ''controlAddr=${cfg.controlAddr}''}
       ${optionalString (cfg.nodeName != null) ''nodeName=${cfg.nodeName}''}
       ${optionalString (cfg.partitionName != null) ''partitionName=${cfg.partitionName}''}
+      PlugStackConfig=${plugStackConfig}
       ${cfg.extraConfig}
     '';
+
+  plugStackConfig = pkgs.writeText "plugstack.conf"
+    ''
+      ${optionalString cfg.enableSrunX11 ''optional ${pkgs.slurm-spank-x11}/lib/x11.so''}
+    '';
 in
 
 {
@@ -28,7 +34,7 @@ in
         enable = mkEnableOption "slurm control daemon";
 
       };
-      
+
       client = {
         enable = mkEnableOption "slurm rlient daemon";
 
@@ -86,8 +92,19 @@ in
         '';
       };
 
+      enableSrunX11 = mkOption {
+        default = false;
+        type = types.bool;
+        description = ''
+          If enabled srun will accept the option "--x11" to allow for X11 forwarding
+          from within an interactive session or a batch job. This activates the
+          slurm-spank-x11 module. Note that this requires 'services.openssh.forwardX11'
+          to be enabled on the compute nodes.
+        '';
+      };
+
       extraConfig = mkOption {
-        default = ""; 
+        default = "";
         type = types.lines;
         description = ''
           Extra configuration options that will be added verbatim at
@@ -134,7 +151,8 @@ in
     environment.systemPackages = [ wrappedSlurm ];
 
     systemd.services.slurmd = mkIf (cfg.client.enable) {
-      path = with pkgs; [ wrappedSlurm coreutils ];
+      path = with pkgs; [ wrappedSlurm coreutils ]
+        ++ lib.optional cfg.enableSrunX11 slurm-spank-x11;
 
       wantedBy = [ "multi-user.target" ];
       after = [ "systemd-tmpfiles-clean.service" ];
@@ -152,8 +170,9 @@ in
     };
 
     systemd.services.slurmctld = mkIf (cfg.server.enable) {
-      path = with pkgs; [ wrappedSlurm munge coreutils ];
-      
+      path = with pkgs; [ wrappedSlurm munge coreutils ]
+        ++ lib.optional cfg.enableSrunX11 slurm-spank-x11;
+
       wantedBy = [ "multi-user.target" ];
       after = [ "network.target" "munged.service" ];
       requires = [ "munged.service" ];
diff --git a/nixos/modules/services/continuous-integration/buildkite-agent.nix b/nixos/modules/services/continuous-integration/buildkite-agent.nix
index 1b0198ac93fe..0a0c9f665d25 100644
--- a/nixos/modules/services/continuous-integration/buildkite-agent.nix
+++ b/nixos/modules/services/continuous-integration/buildkite-agent.nix
@@ -4,6 +4,31 @@ with lib;
 
 let
   cfg = config.services.buildkite-agent;
+
+  mkHookOption = { name, description, example ? null }: {
+    inherit name;
+    value = mkOption {
+      default = null;
+      inherit description;
+      type = types.nullOr types.lines;
+    } // (if example == null then {} else { inherit example; });
+  };
+  mkHookOptions = hooks: listToAttrs (map mkHookOption hooks);
+
+  hooksDir = let
+    mkHookEntry = name: value: ''
+      cat > $out/${name} <<EOF
+      #! ${pkgs.stdenv.shell}
+      set -e
+      ${value}
+      EOF
+      chmod 755 $out/${name}
+    '';
+  in pkgs.runCommand "buildkite-agent-hooks" {} ''
+    mkdir $out
+    ${concatStringsSep "\n" (mapAttrsToList mkHookEntry (filterAttrs (n: v: v != null) cfg.hooks))}
+  '';
+
 in
 
 {
@@ -43,25 +68,28 @@ in
 
       name = mkOption {
         type = types.str;
+        default = "%hostname-%n";
         description = ''
           The name of the agent.
         '';
       };
 
-      hooksPath = mkOption {
-        type = types.path;
-        default = "${pkgs.buildkite-agent}/share/hooks";
-        defaultText = "${pkgs.buildkite-agent}/share/hooks";
+      meta-data = mkOption {
+        type = types.str;
+        default = "";
+        example = "queue=default,docker=true,ruby2=true";
         description = ''
-          Path to the directory storing the hooks.
+          Meta data for the agent. This is a comma-separated list of
+          <code>key=value</code> pairs.
         '';
       };
 
-      meta-data = mkOption {
-        type = types.str;
+      extraConfig = mkOption {
+        type = types.lines;
         default = "";
+        example = "debug=true";
         description = ''
-          Meta data for the agent.
+          Extra lines to be added verbatim to the configuration file.
         '';
       };
 
@@ -85,6 +113,74 @@ in
             '';
           };
         };
+
+      hooks = mkHookOptions [
+        { name = "checkout";
+          description = ''
+            The `checkout` hook script will replace the default checkout routine of the
+            bootstrap.sh script. You can use this hook to do your own SCM checkout
+            behaviour
+          ''; }
+        { name = "command";
+          description = ''
+            The `command` hook script will replace the default implementation of running
+            the build command.
+          ''; }
+        { name = "environment";
+          description = ''
+            The `environment` hook will run before all other commands, and can be used
+            to set up secrets, data, etc. Anything exported in hooks will be available
+            to the build script.
+
+            Note: the contents of this file will be copied to the world-readable
+            Nix store.
+          '';
+          example = ''
+            export SECRET_VAR=`head -1 /run/keys/secret`
+          ''; }
+        { name = "post-artifact";
+          description = ''
+            The `post-artifact` hook will run just after artifacts are uploaded
+          ''; }
+        { name = "post-checkout";
+          description = ''
+            The `post-checkout` hook will run after the bootstrap script has checked out
+            your projects source code.
+          ''; }
+        { name = "post-command";
+          description = ''
+            The `post-command` hook will run after the bootstrap script has run your
+            build commands
+          ''; }
+        { name = "pre-artifact";
+          description = ''
+            The `pre-artifact` hook will run just before artifacts are uploaded
+          ''; }
+        { name = "pre-checkout";
+          description = ''
+            The `pre-checkout` hook will run just before your projects source code is
+            checked out from your SCM provider
+          ''; }
+        { name = "pre-command";
+          description = ''
+            The `pre-command` hook will run just before your build command runs
+          ''; }
+        { name = "pre-exit";
+          description = ''
+            The `pre-exit` hook will run just before your build job finishes
+          ''; }
+      ];
+
+      hooksPath = mkOption {
+        type = types.path;
+        default = hooksDir;
+        defaultText = "generated from services.buildkite-agent.hooks";
+        description = ''
+          Path to the directory storing the hooks.
+          Consider using <option>services.buildkite-agent.hooks.&lt;name&gt;</option>
+          instead.
+        '';
+      };
     };
   };
 
@@ -100,13 +196,10 @@ in
     environment.systemPackages = [ cfg.package ];
 
     systemd.services.buildkite-agent =
-      let copy = x: target: perms:
-                 "cp -f ${x} ${target}; ${pkgs.coreutils}/bin/chmod ${toString perms} ${target}; ";
-      in
       { description = "Buildkite Agent";
         wantedBy = [ "multi-user.target" ];
         after = [ "network.target" ];
-        path = cfg.runtimePackages;
+        path = cfg.runtimePackages ++ [ pkgs.coreutils ];
         environment = config.networking.proxy.envVars // {
           HOME = cfg.dataDir;
           NIX_REMOTE = "daemon";
@@ -114,10 +207,14 @@ in
 
         ## NB: maximum care is taken so that secrets (ssh keys and the CI token)
         ##     don't end up in the Nix store.
-        preStart = ''
-            ${pkgs.coreutils}/bin/mkdir -m 0700 -p ${cfg.dataDir}/.ssh
-            ${copy (toString cfg.openssh.privateKeyPath) "${cfg.dataDir}/.ssh/id_rsa"     600}
-            ${copy (toString cfg.openssh.publicKeyPath)  "${cfg.dataDir}/.ssh/id_rsa.pub" 600}
+        preStart = let
+          sshDir = "${cfg.dataDir}/.ssh";
+        in
+          ''
+            mkdir -m 0700 -p "${sshDir}"
+            cp -f "${toString cfg.openssh.privateKeyPath}" "${sshDir}/id_rsa"
+            cp -f "${toString cfg.openssh.publicKeyPath}"  "${sshDir}/id_rsa.pub"
+            chmod 600 "${sshDir}"/id_rsa*
 
             cat > "${cfg.dataDir}/buildkite-agent.cfg" <<EOF
             token="$(cat ${toString cfg.tokenPath})"
@@ -125,7 +222,7 @@ in
             meta-data="${cfg.meta-data}"
             build-path="${cfg.dataDir}/builds"
             hooks-path="${cfg.hooksPath}"
-            bootstrap-script="${pkgs.buildkite-agent}/share/bootstrap.sh"
+            ${cfg.extraConfig}
             EOF
           '';
 
@@ -137,6 +234,15 @@ in
             TimeoutSec = 10;
           };
       };
+
+    assertions = [
+      { assertion = cfg.hooksPath == hooksDir || all isNull (attrValues cfg.hooks);
+        message = ''
+          Options `services.buildkite-agent.hooksPath' and
+          `services.buildkite-agent.hooks.<name>' are mutually exclusive.
+        '';
+      }
+    ];
   };
   imports = [
     (mkRenamedOptionModule [ "services" "buildkite-agent" "token" ]                [ "services" "buildkite-agent" "tokenPath" ])
diff --git a/nixos/modules/services/databases/mysql.nix b/nixos/modules/services/databases/mysql.nix
index 36d5340a306f..5b7390503552 100644
--- a/nixos/modules/services/databases/mysql.nix
+++ b/nixos/modules/services/databases/mysql.nix
@@ -289,10 +289,10 @@ in
                     # Create initial databases
                     if ! test -e "${cfg.dataDir}/${database.name}"; then
                         echo "Creating initial database: ${database.name}"
-                        ( echo "create database ${database.name};"
+                        ( echo "create database `${database.name}`;"
 
                           ${optionalString (database ? "schema") ''
-                          echo "use ${database.name};"
+                          echo "use `${database.name}`;"
 
                           if [ -f "${database.schema}" ]
                           then
diff --git a/nixos/modules/services/desktops/pipewire.nix b/nixos/modules/services/desktops/pipewire.nix
new file mode 100644
index 000000000000..263a06156f84
--- /dev/null
+++ b/nixos/modules/services/desktops/pipewire.nix
@@ -0,0 +1,23 @@
+# pipewire service.
+{ config, lib, pkgs, ... }:
+
+with lib;
+
+{
+  ###### interface
+  options = {
+    services.pipewire = {
+      enable = mkEnableOption "pipewire service";
+    };
+  };
+
+
+  ###### implementation
+  config = mkIf config.services.pipewire.enable {
+    environment.systemPackages = [ pkgs.pipewire ];
+
+    systemd.packages = [ pkgs.pipewire ];
+  };
+
+  meta.maintainers = with lib.maintainers; [ jtojnar ];
+}
diff --git a/nixos/modules/services/hardware/acpid.nix b/nixos/modules/services/hardware/acpid.nix
index bb17c8859d84..f69706ebff34 100644
--- a/nixos/modules/services/hardware/acpid.nix
+++ b/nixos/modules/services/hardware/acpid.nix
@@ -31,7 +31,7 @@ let
           ''
             fn=$out/${name}
             echo "event=${handler.event}" > $fn
-            echo "action=${pkgs.writeScript "${name}.sh" (concatStringsSep "\n" [ "#! ${pkgs.bash}/bin/sh" handler.action ])}" >> $fn
+            echo "action=${pkgs.writeShellScriptBin "${name}.sh" handler.action }/bin/${name}.sh '%e'" >> $fn
           '';
         in concatStringsSep "\n" (mapAttrsToList f (canonicalHandlers // config.services.acpid.handlers))
       }
@@ -69,11 +69,33 @@ in
           };
         });
 
-        description = "Event handlers.";
-        default = {};
-        example = { mute = { event = "button/mute.*"; action = "amixer set Master toggle"; }; };
-
+        description = ''
+          Event handlers.
 
+          <note><para>
+            Handler can be a single command.
+          </para></note>
+        '';
+        default = {};
+        example = {
+          ac-power = {
+            event = "ac_adapter/*";
+            action = ''
+              vals=($1)  # space separated string to array of multiple values
+              case ''${vals[3]} in
+                  00000000)
+                      echo unplugged >> /tmp/acpi.log
+                      ;;
+                  00000001)
+                      echo plugged in >> /tmp/acpi.log
+                      ;;
+                  *)
+                      echo unknown >> /tmp/acpi.log
+                      ;;
+              esac
+            '';
+          };
+        };
       };
 
       powerEventCommands = mkOption {
diff --git a/nixos/modules/services/hardware/fwupd.nix b/nixos/modules/services/hardware/fwupd.nix
index 14113fe01bb4..1f4acd21eccf 100644
--- a/nixos/modules/services/hardware/fwupd.nix
+++ b/nixos/modules/services/hardware/fwupd.nix
@@ -87,4 +87,8 @@ in {
       "d /var/lib/fwupd 0755 root root -"
     ];
   };
+
+  meta = {
+    maintainers = pkgs.fwupd.maintainers;
+  };
 }
diff --git a/nixos/modules/services/hardware/nvidia-optimus.nix b/nixos/modules/services/hardware/nvidia-optimus.nix
index 9fe4021c4247..eb1713baa140 100644
--- a/nixos/modules/services/hardware/nvidia-optimus.nix
+++ b/nixos/modules/services/hardware/nvidia-optimus.nix
@@ -23,7 +23,7 @@ let kernel = config.boot.kernelPackages; in
   ###### implementation
 
   config = lib.mkIf config.hardware.nvidiaOptimus.disable {
-    boot.blacklistedKernelModules = ["nouveau" "nvidia" "nvidiafb"];
+    boot.blacklistedKernelModules = ["nouveau" "nvidia" "nvidiafb" "nvidia-drm"];
     boot.kernelModules = [ "bbswitch" ];
     boot.extraModulePackages = [ kernel.bbswitch ];
 
diff --git a/nixos/modules/services/mail/dovecot.nix b/nixos/modules/services/mail/dovecot.nix
index 18101a312254..b42c73b86668 100644
--- a/nixos/modules/services/mail/dovecot.nix
+++ b/nixos/modules/services/mail/dovecot.nix
@@ -104,7 +104,7 @@ let
   };
 
   mailboxConfig = mailbox: ''
-    mailbox ${mailbox.name} {
+    mailbox "${mailbox.name}" {
       auto = ${toString mailbox.auto}
   '' + optionalString (mailbox.specialUse != null) ''
       special_use = \${toString mailbox.specialUse}
@@ -113,7 +113,7 @@ let
   mailboxes = { lib, pkgs, ... }: {
     options = {
       name = mkOption {
-        type = types.str;
+        type = types.strMatching ''[^"]+'';
         example = "Spam";
         description = "The name of the mailbox.";
       };
diff --git a/nixos/modules/services/mail/postfix.nix b/nixos/modules/services/mail/postfix.nix
index 22af7e876af2..5ab331ac067f 100644
--- a/nixos/modules/services/mail/postfix.nix
+++ b/nixos/modules/services/mail/postfix.nix
@@ -414,7 +414,10 @@ in
       postmasterAlias = mkOption {
         type = types.str;
         default = "root";
-        description = "Who should receive postmaster e-mail.";
+        description = "
+          Who should receive postmaster e-mail. Multiple values can be added by
+          separating values with comma.
+        ";
       };
 
       rootAlias = mkOption {
@@ -422,6 +425,7 @@ in
         default = "";
         description = "
           Who should receive root e-mail. Blank for no redirection.
+          Multiple values can be added by separating values with comma.
         ";
       };
 
diff --git a/nixos/modules/services/mail/rspamd.nix b/nixos/modules/services/mail/rspamd.nix
index b80aa48f2c86..09fb587e74b5 100644
--- a/nixos/modules/services/mail/rspamd.nix
+++ b/nixos/modules/services/mail/rspamd.nix
@@ -1,14 +1,152 @@
-{ config, lib, pkgs, ... }:
+{ config, options, pkgs, lib, ... }:
 
 with lib;
 
 let
 
   cfg = config.services.rspamd;
+  opts = options.services.rspamd;
 
-  mkBindSockets = socks: concatStringsSep "\n" (map (each: "  bind_socket = \"${each}\"") socks);
+  bindSocketOpts = {options, config, ... }: {
+    options = {
+      socket = mkOption {
+        type = types.str;
+        example = "localhost:11333";
+        description = ''
+          Socket for this worker to listen on in a format acceptable by rspamd.
+        '';
+      };
+      mode = mkOption {
+        type = types.str;
+        default = "0644";
+        description = "Mode to set on unix socket";
+      };
+      owner = mkOption {
+        type = types.str;
+        default = "${cfg.user}";
+        description = "Owner to set on unix socket";
+      };
+      group = mkOption {
+        type = types.str;
+        default = "${cfg.group}";
+        description = "Group to set on unix socket";
+      };
+      rawEntry = mkOption {
+        type = types.str;
+        internal = true;
+      };
+    };
+    config.rawEntry = let
+      maybeOption = option:
+        optionalString options.${option}.isDefined " ${option}=${config.${option}}";
+    in
+      if (!(hasPrefix "/" config.socket)) then "${config.socket}"
+      else "${config.socket}${maybeOption "mode"}${maybeOption "owner"}${maybeOption "group"}";
+  };
 
-   rspamdConfFile = pkgs.writeText "rspamd.conf"
+  workerOpts = { name, ... }: {
+    options = {
+      enable = mkOption {
+        type = types.nullOr types.bool;
+        default = null;
+        description = "Whether to run the rspamd worker.";
+      };
+      name = mkOption {
+        type = types.nullOr types.str;
+        default = name;
+        description = "Name of the worker";
+      };
+      type = mkOption {
+        type = types.nullOr (types.enum [
+          "normal" "controller" "fuzzy_storage" "proxy" "lua"
+        ]);
+        description = "The type of this worker";
+      };
+      bindSockets = mkOption {
+        type = types.listOf (types.either types.str (types.submodule bindSocketOpts));
+        default = [];
+        description = ''
+          List of sockets to listen, in format acceptable by rspamd
+        '';
+        example = [{
+          socket = "/run/rspamd.sock";
+          mode = "0666";
+          owner = "rspamd";
+        } "*:11333"];
+        apply = value: map (each: if (isString each)
+          then if (isUnixSocket each)
+            then {socket = each; owner = cfg.user; group = cfg.group; mode = "0644"; rawEntry = "${each}";}
+            else {socket = each; rawEntry = "${each}";}
+          else each) value;
+      };
+      count = mkOption {
+        type = types.nullOr types.int;
+        default = null;
+        description = ''
+          Number of worker instances to run
+        '';
+      };
+      includes = mkOption {
+        type = types.listOf types.str;
+        default = [];
+        description = ''
+          List of files to include in configuration
+        '';
+      };
+      extraConfig = mkOption {
+        type = types.lines;
+        default = "";
+        description = "Additional entries to put verbatim into worker section of rspamd config file.";
+      };
+    };
+    config = mkIf (name == "normal" || name == "controller" || name == "fuzzy") {
+      type = mkDefault name;
+      includes = mkDefault [ "$CONFDIR/worker-${name}.inc" ];
+      bindSockets = mkDefault (if name == "normal"
+        then [{
+              socket = "/run/rspamd/rspamd.sock";
+              mode = "0660";
+              owner = cfg.user;
+              group = cfg.group;
+            }]
+        else if name == "controller"
+        then [ "localhost:11334" ]
+        else [] );
+    };
+  };
+
+  indexOf = default: start: list: e:
+    if list == []
+    then default
+    else if (head list) == e then start
+    else (indexOf default (start + (length (listenStreams (head list).socket))) (tail list) e);
+
+  systemdSocket = indexOf (abort "Socket not found") 0 allSockets;
+
+  isUnixSocket = socket: hasPrefix "/" (if (isString socket) then socket else socket.socket);
+  isPort = hasPrefix "*:";
+  isIPv4Socket = hasPrefix "*v4:";
+  isIPv6Socket = hasPrefix "*v6:";
+  isLocalHost = hasPrefix "localhost:";
+  listenStreams = socket:
+    if (isLocalHost socket) then
+      let port = (removePrefix "localhost:" socket);
+      in [ "127.0.0.1:${port}" ] ++ (if config.networking.enableIPv6 then ["[::1]:${port}"] else [])
+    else if (isIPv6Socket socket) then [removePrefix "*v6:" socket]
+    else if (isPort socket) then [removePrefix "*:" socket]
+    else if (isIPv4Socket socket) then
+      throw "error: IPv4 only socket not supported in rspamd with socket activation"
+    else if (length (splitString " " socket)) != 1 then
+      throw "error: string options not supported in rspamd with socket activation"
+    else [socket];
+
+  mkBindSockets = enabled: socks: concatStringsSep "\n  " (flatten (map (each:
+    if cfg.socketActivation && enabled != false then
+      let systemd = (systemdSocket each);
+      in (imap (idx: e: "bind_socket = \"systemd:${toString (systemd + idx - 1)}\";") (listenStreams each.socket))
+    else "bind_socket = \"${each.rawEntry}\";") socks));
+
+  rspamdConfFile = pkgs.writeText "rspamd.conf"
     ''
       .include "$CONFDIR/common.conf"
 
@@ -22,19 +160,33 @@ let
         .include "$CONFDIR/logging.inc"
       }
 
-      worker {
-      ${mkBindSockets cfg.bindSocket}
-        .include "$CONFDIR/worker-normal.inc"
-      }
-
-      worker {
-      ${mkBindSockets cfg.bindUISocket}
-        .include "$CONFDIR/worker-controller.inc"
-      }
+      ${concatStringsSep "\n" (mapAttrsToList (name: value: ''
+        worker ${optionalString (value.name != "normal" && value.name != "controller") "${value.name}"} {
+          type = "${value.type}";
+          ${optionalString (value.enable != null)
+            "enabled = ${if value.enable != false then "yes" else "no"};"}
+          ${mkBindSockets value.enable value.bindSockets}
+          ${optionalString (value.count != null) "count = ${toString value.count};"}
+          ${concatStringsSep "\n  " (map (each: ".include \"${each}\"") value.includes)}
+          ${value.extraConfig}
+        }
+      '') cfg.workers)}
 
       ${cfg.extraConfig}
    '';
 
+  allMappedSockets = flatten (mapAttrsToList (name: value:
+    if value.enable != false
+    then imap (idx: each: {
+        name = "${name}";
+        index = idx;
+        value = each;
+      }) value.bindSockets
+    else []) cfg.workers);
+  allSockets = map (e: e.value) allMappedSockets;
+
+  allSocketNames = map (each: "rspamd-${each.name}-${toString each.index}.socket") allMappedSockets;
+
 in
 
 {
@@ -48,36 +200,43 @@ in
       enable = mkEnableOption "Whether to run the rspamd daemon.";
 
       debug = mkOption {
+        type = types.bool;
         default = false;
         description = "Whether to run the rspamd daemon in debug mode.";
       };
 
-      bindSocket = mkOption {
-        type = types.listOf types.str;
-        default = [
-          "/run/rspamd/rspamd.sock mode=0660 owner=${cfg.user} group=${cfg.group}"
-        ];
-        defaultText = ''[
-          "/run/rspamd/rspamd.sock mode=0660 owner=${cfg.user} group=${cfg.group}"
-        ]'';
+      socketActivation = mkOption {
+        type = types.bool;
         description = ''
-          List of sockets to listen, in format acceptable by rspamd
-        '';
-        example = ''
-          bindSocket = [
-            "/run/rspamd.sock mode=0666 owner=rspamd"
-            "*:11333"
-          ];
+          Enable systemd socket activation for rspamd.
         '';
       };
 
-      bindUISocket = mkOption {
-        type = types.listOf types.str;
-        default = [
-          "localhost:11334"
-        ];
+      workers = mkOption {
+        type = with types; attrsOf (submodule workerOpts);
         description = ''
-          List of sockets for web interface, in format acceptable by rspamd
+          Attribute set of workers to start.
+        '';
+        default = {
+          normal = {};
+          controller = {};
+        };
+        example = literalExample ''
+          {
+            normal = {
+              includes = [ "$CONFDIR/worker-normal.inc" ];
+              bindSockets = [{
+                socket = "/run/rspamd/rspamd.sock";
+                mode = "0660";
+                owner = "${cfg.user}";
+                group = "${cfg.group}";
+              }];
+            };
+            controller = {
+              includes = [ "$CONFDIR/worker-controller.inc" ];
+              bindSockets = [ "[::1]:11334" ];
+            };
+          }
         '';
       };
 
@@ -113,6 +272,13 @@ in
 
   config = mkIf cfg.enable {
 
+    services.rspamd.socketActivation = mkDefault (!opts.bindSocket.isDefined && !opts.bindUISocket.isDefined);
+
+    assertions = [ {
+      assertion = !cfg.socketActivation || !(opts.bindSocket.isDefined || opts.bindUISocket.isDefined);
+      message = "Can't use socketActivation for rspamd when using renamed bind socket options";
+    } ];
+
     # Allow users to run 'rspamc' and 'rspamadm'.
     environment.systemPackages = [ pkgs.rspamd ];
 
@@ -128,17 +294,22 @@ in
       gid = config.ids.gids.rspamd;
     };
 
+    environment.etc."rspamd.conf".source = rspamdConfFile;
+
     systemd.services.rspamd = {
       description = "Rspamd Service";
 
-      wantedBy = [ "multi-user.target" ];
-      after = [ "network.target" ];
+      wantedBy = mkIf (!cfg.socketActivation) [ "multi-user.target" ];
+      after = [ "network.target" ] ++
+       (if cfg.socketActivation then allSocketNames else []);
+      requires = mkIf cfg.socketActivation allSocketNames;
 
       serviceConfig = {
         ExecStart = "${pkgs.rspamd}/bin/rspamd ${optionalString cfg.debug "-d"} --user=${cfg.user} --group=${cfg.group} --pid=/run/rspamd.pid -c ${rspamdConfFile} -f";
         Restart = "always";
         RuntimeDirectory = "rspamd";
         PrivateTmp = true;
+        Sockets = mkIf cfg.socketActivation (concatStringsSep " " allSocketNames);
       };
 
       preStart = ''
@@ -146,5 +317,25 @@ in
         ${pkgs.coreutils}/bin/chown ${cfg.user}:${cfg.group} /var/lib/rspamd
       '';
     };
+    systemd.sockets = mkIf cfg.socketActivation
+      (listToAttrs (map (each: {
+        name = "rspamd-${each.name}-${toString each.index}";
+        value = {
+          description = "Rspamd socket ${toString each.index} for worker ${each.name}";
+          wantedBy = [ "sockets.target" ];
+          listenStreams = (listenStreams each.value.socket);
+          socketConfig = {
+            BindIPv6Only = mkIf (isIPv6Socket each.value.socket) "ipv6-only";
+            Service = "rspamd.service";
+            SocketUser = mkIf (isUnixSocket each.value.socket) each.value.owner;
+            SocketGroup = mkIf (isUnixSocket each.value.socket) each.value.group;
+            SocketMode = mkIf (isUnixSocket each.value.socket) each.value.mode;
+          };
+        };
+      }) allMappedSockets));
   };
+  imports = [
+    (mkRenamedOptionModule [ "services" "rspamd" "bindSocket" ] [ "services" "rspamd" "workers" "normal" "bindSockets" ])
+    (mkRenamedOptionModule [ "services" "rspamd" "bindUISocket" ] [ "services" "rspamd" "workers" "controller" "bindSockets" ])
+  ];
 }
diff --git a/nixos/modules/services/misc/home-assistant.nix b/nixos/modules/services/misc/home-assistant.nix
index 666fa68b01ce..cc60a143fa6c 100644
--- a/nixos/modules/services/misc/home-assistant.nix
+++ b/nixos/modules/services/misc/home-assistant.nix
@@ -9,8 +9,27 @@ let
 
   availableComponents = pkgs.home-assistant.availableComponents;
 
+  # Given component "parentConfig.platform", returns whether config.parentConfig
+  # is a list containing a set with set.platform == "platform".
+  #
+  # For example, the component sensor.luftdaten is used as follows:
+  # config.sensor = [ {
+  #   platform = "luftdaten";
+  #   ...
+  # } ];
+  useComponentPlatform = component:
+    let
+      path = splitString "." component;
+      parentConfig = attrByPath (init path) null cfg.config;
+      platform = last path;
+    in isList parentConfig && any
+      (item: item.platform or null == platform)
+      parentConfig;
+
   # Returns whether component is used in config
-  useComponent = component: hasAttrByPath (splitString "." component) cfg.config;
+  useComponent = component:
+    hasAttrByPath (splitString "." component) cfg.config
+    || useComponentPlatform component;
 
   # List of components used in config
   extraComponents = filter useComponent availableComponents;
diff --git a/nixos/modules/services/misc/nixos-manual.nix b/nixos/modules/services/misc/nixos-manual.nix
index 41cadb4a6de0..5d0f2abd13a9 100644
--- a/nixos/modules/services/misc/nixos-manual.nix
+++ b/nixos/modules/services/misc/nixos-manual.nix
@@ -16,10 +16,10 @@ let
     It isn't perfect, but it seems to cover a vast majority of use cases.
     Caveat: even if the package is reached by a different means,
     the path above will be shown and not e.g. `${config.services.foo.package}`. */
-  manual = import ../../../doc/manual {
+  manual = import ../../../doc/manual rec {
     inherit pkgs config;
-    version = config.system.nixosRelease;
-    revision = "release-${config.system.nixosRelease}";
+    version = config.system.nixos.release;
+    revision = "release-${version}";
     options =
       let
         scrubbedEval = evalModules {
diff --git a/nixos/modules/services/misc/novacomd.nix b/nixos/modules/services/misc/novacomd.nix
new file mode 100644
index 000000000000..7cfc68d2b673
--- /dev/null
+++ b/nixos/modules/services/misc/novacomd.nix
@@ -0,0 +1,31 @@
+{ config, lib, pkgs, ... }:
+
+with lib;
+
+let
+
+  cfg = config.services.novacomd;
+
+in {
+
+  options = {
+    services.novacomd = {
+      enable = mkEnableOption "Novacom service for connecting to WebOS devices";
+    };
+  };
+
+  config = mkIf cfg.enable {
+    environment.systemPackages = [ pkgs.webos.novacom ];
+
+    systemd.services.novacomd = {
+      description = "Novacom WebOS daemon";
+      wantedBy = [ "multi-user.target" ];
+
+      serviceConfig = {
+        ExecStart = "${pkgs.webos.novacomd}/sbin/novacomd";
+      };
+    };
+  };
+
+  meta.maintainers = with maintainers; [ dtzWill ];
+}
diff --git a/nixos/modules/services/misc/ssm-agent.nix b/nixos/modules/services/misc/ssm-agent.nix
index c1e1f0903539..a57fbca86fb6 100644
--- a/nixos/modules/services/misc/ssm-agent.nix
+++ b/nixos/modules/services/misc/ssm-agent.nix
@@ -12,7 +12,7 @@ let
 
     case "$1" in
       -i) echo "nixos";;
-      -r) echo "${config.system.nixosVersion}";;
+      -r) echo "${config.system.nixos.version}";;
     esac
   '';
 in {
diff --git a/nixos/modules/services/misc/zookeeper.nix b/nixos/modules/services/misc/zookeeper.nix
index d85b5e4ec507..91539592511c 100644
--- a/nixos/modules/services/misc/zookeeper.nix
+++ b/nixos/modules/services/misc/zookeeper.nix
@@ -106,10 +106,19 @@ in {
       '';
     };
 
+    package = mkOption {
+      description = "The zookeeper package to use";
+      default = pkgs.zookeeper;
+      defaultText = "pkgs.zookeeper";
+      type = types.package;
+    };
+
   };
 
 
   config = mkIf cfg.enable {
+    environment.systemPackages = [cfg.package];
+
     systemd.services.zookeeper = {
       description = "Zookeeper Daemon";
       wantedBy = [ "multi-user.target" ];
@@ -118,7 +127,7 @@ in {
       serviceConfig = {
         ExecStart = ''
           ${pkgs.jre}/bin/java \
-            -cp "${pkgs.zookeeper}/lib/*:${pkgs.zookeeper}/${pkgs.zookeeper.name}.jar:${configDir}" \
+            -cp "${cfg.package}/lib/*:${cfg.package}/${cfg.package.name}.jar:${configDir}" \
             ${escapeShellArgs cfg.extraCmdLineOptions} \
             -Dzookeeper.datadir.autocreate=false \
             ${optionalString cfg.preferIPv4 "-Djava.net.preferIPv4Stack=true"} \
diff --git a/nixos/modules/services/monitoring/prometheus/alertmanager.nix b/nixos/modules/services/monitoring/prometheus/alertmanager.nix
index cf761edad926..8a47c9f1e7d8 100644
--- a/nixos/modules/services/monitoring/prometheus/alertmanager.nix
+++ b/nixos/modules/services/monitoring/prometheus/alertmanager.nix
@@ -111,11 +111,11 @@ in {
       after    = [ "network.target" ];
       script = ''
         ${pkgs.prometheus-alertmanager.bin}/bin/alertmanager \
-        -config.file ${alertmanagerYml} \
-        -web.listen-address ${cfg.listenAddress}:${toString cfg.port} \
-        -log.level ${cfg.logLevel} \
-        ${optionalString (cfg.webExternalUrl != null) ''-web.external-url ${cfg.webExternalUrl} \''}
-        ${optionalString (cfg.logFormat != null) "-log.format ${cfg.logFormat}"}
+        --config.file ${alertmanagerYml} \
+        --web.listen-address ${cfg.listenAddress}:${toString cfg.port} \
+        --log.level ${cfg.logLevel} \
+        ${optionalString (cfg.webExternalUrl != null) ''--web.external-url ${cfg.webExternalUrl} \''}
+        ${optionalString (cfg.logFormat != null) "--log.format ${cfg.logFormat}"}
       '';
 
       serviceConfig = {
diff --git a/nixos/modules/services/network-filesystems/openafs-client/default.nix b/nixos/modules/services/network-filesystems/openafs-client/default.nix
deleted file mode 100644
index 0946e379e796..000000000000
--- a/nixos/modules/services/network-filesystems/openafs-client/default.nix
+++ /dev/null
@@ -1,99 +0,0 @@
-{ config, pkgs, lib, ... }:
-
-let
-  inherit (lib) mkOption mkIf;
-
-  cfg = config.services.openafsClient;
-
-  cellServDB = pkgs.fetchurl {
-    url = http://dl.central.org/dl/cellservdb/CellServDB.2017-03-14;
-    sha256 = "1197z6c5xrijgf66rhaymnm5cvyg2yiy1i20y4ah4mrzmjx0m7sc";
-  };
-
-  afsConfig = pkgs.runCommand "afsconfig" {} ''
-    mkdir -p $out
-    echo ${cfg.cellName} > $out/ThisCell
-    cp ${cellServDB} $out/CellServDB
-    echo "/afs:${cfg.cacheDirectory}:${cfg.cacheSize}" > $out/cacheinfo
-  '';
-
-  openafsPkgs = config.boot.kernelPackages.openafsClient;
-in
-{
-  ###### interface
-
-  options = {
-
-    services.openafsClient = {
-
-      enable = mkOption {
-        default = false;
-        description = "Whether to enable the OpenAFS client.";
-      };
-
-      cellName = mkOption {
-        default = "grand.central.org";
-        description = "Cell name.";
-      };
-
-      cacheSize = mkOption {
-        default = "100000";
-        description = "Cache size.";
-      };
-
-      cacheDirectory = mkOption {
-        default = "/var/cache/openafs";
-        description = "Cache directory.";
-      };
-
-      crypt = mkOption {
-        default = false;
-        description = "Whether to enable (weak) protocol encryption.";
-      };
-
-      sparse = mkOption {
-        default = false;
-        description = "Minimal cell list in /afs.";
-      };
-
-    };
-  };
-
-
-  ###### implementation
-
-  config = mkIf cfg.enable {
-
-    environment.systemPackages = [ openafsPkgs ];
-
-    environment.etc = [
-      { source = afsConfig;
-        target = "openafs";
-      }
-    ];
-
-    systemd.services.afsd = {
-      description = "AFS client";
-      wantedBy = [ "multi-user.target" ];
-      after = [ "network.target" ];
-      serviceConfig = { RemainAfterExit = true; };
-
-      preStart = ''
-        mkdir -p -m 0755 /afs
-        mkdir -m 0700 -p ${cfg.cacheDirectory}
-        ${pkgs.kmod}/bin/insmod ${openafsPkgs}/lib/openafs/libafs-*.ko || true
-        ${openafsPkgs}/sbin/afsd -confdir ${afsConfig} -cachedir ${cfg.cacheDirectory} ${if cfg.sparse then "-dynroot-sparse" else "-dynroot"} -fakestat -afsdb
-        ${openafsPkgs}/bin/fs setcrypt ${if cfg.crypt then "on" else "off"}
-      '';
-
-      # Doing this in preStop, because after these commands AFS is basically
-      # stopped, so systemd has nothing to do, just noticing it.  If done in
-      # postStop, then we get a hang + kernel oops, because AFS can't be
-      # stopped simply by sending signals to processes.
-      preStop = ''
-        ${pkgs.utillinux}/bin/umount /afs
-        ${openafsPkgs}/sbin/afsd -shutdown
-      '';
-    };
-  };
-}
diff --git a/nixos/modules/services/network-filesystems/openafs/client.nix b/nixos/modules/services/network-filesystems/openafs/client.nix
new file mode 100644
index 000000000000..3826fe3edfd0
--- /dev/null
+++ b/nixos/modules/services/network-filesystems/openafs/client.nix
@@ -0,0 +1,239 @@
+{ config, pkgs, lib, ... }:
+
+with import ./lib.nix { inherit lib; };
+
+let
+  inherit (lib) getBin mkOption mkIf optionalString singleton types;
+
+  cfg = config.services.openafsClient;
+
+  cellServDB = pkgs.fetchurl {
+    url = http://dl.central.org/dl/cellservdb/CellServDB.2017-03-14;
+    sha256 = "1197z6c5xrijgf66rhaymnm5cvyg2yiy1i20y4ah4mrzmjx0m7sc";
+  };
+
+  clientServDB = pkgs.writeText "client-cellServDB-${cfg.cellName}" (mkCellServDB cfg.cellName cfg.cellServDB);
+
+  afsConfig = pkgs.runCommand "afsconfig" {} ''
+    mkdir -p $out
+    echo ${cfg.cellName} > $out/ThisCell
+    cat ${cellServDB} ${clientServDB} > $out/CellServDB
+    echo "${cfg.mountPoint}:${cfg.cache.directory}:${toString cfg.cache.blocks}" > $out/cacheinfo
+  '';
+
+  openafsMod = config.boot.kernelPackages.openafs;
+  openafsBin = lib.getBin pkgs.openafs;
+in
+{
+  ###### interface
+
+  options = {
+
+    services.openafsClient = {
+
+      enable = mkOption {
+        default = false;
+        type = types.bool;
+        description = "Whether to enable the OpenAFS client.";
+      };
+
+      afsdb = mkOption {
+        default = true;
+        type = types.bool;
+        description = "Resolve cells via AFSDB DNS records.";
+      };
+
+      cellName = mkOption {
+        default = "";
+        type = types.str;
+        description = "Cell name.";
+        example = "grand.central.org";
+      };
+
+      cellServDB = mkOption {
+        default = [];
+        type = with types; listOf (submodule { options = cellServDBConfig; });
+        description = ''
+          This cell's database server records, added to the global
+          CellServDB. See CellServDB(5) man page for syntax. Ignored when
+          <literal>afsdb</literal> is set to <literal>true</literal>.
+        '';
+        example = ''
+          [ { ip = "1.2.3.4"; dnsname = "first.afsdb.server.dns.fqdn.org"; }
+            { ip = "2.3.4.5"; dnsname = "second.afsdb.server.dns.fqdn.org"; }
+          ]
+        '';
+      };
+
+      cache = {
+        blocks = mkOption {
+          default = 100000;
+          type = types.int;
+          description = "Cache size in 1KB blocks.";
+        };
+
+        chunksize = mkOption {
+          default = 0;
+          type = types.ints.between 0 30;
+          description = ''
+            Size of each cache chunk given in powers of
+            2. <literal>0</literal> resets the chunk size to its default
+            values (13 (8 KB) for memcache, 18-20 (256 KB to 1 MB) for
+            diskcache). Maximum value is 30. Important performance
+            parameter. Set to higher values when dealing with large files.
+          '';
+        };
+
+        directory = mkOption {
+          default = "/var/cache/openafs";
+          type = types.str;
+          description = "Cache directory.";
+        };
+
+        diskless = mkOption {
+          default = false;
+          type = types.bool;
+          description = ''
+            Use in-memory cache for diskless machines. Has no real
+            performance benefit anymore.
+          '';
+        };
+      };
+
+      crypt = mkOption {
+        default = true;
+        type = types.bool;
+        description = "Whether to enable (weak) protocol encryption.";
+      };
+
+      daemons = mkOption {
+        default = 2;
+        type = types.int;
+        description = ''
+          Number of daemons to serve user requests. Numbers higher than 6
+          usually do no increase performance. Default is sufficient for up
+          to five concurrent users.
+        '';
+      };
+
+      fakestat = mkOption {
+        default = false;
+        type = types.bool;
+        description = ''
+          Return fake data on stat() calls. If <literal>true</literal>,
+          always do so. If <literal>false</literal>, only do so for
+          cross-cell mounts (as these are potentially expensive).
+        '';
+      };
+
+      inumcalc = mkOption {
+        default = "compat";
+        type = types.strMatching "compat|md5";
+        description = ''
+          Inode calculation method. <literal>compat</literal> is
+          computationally less expensive, but <literal>md5</literal> greatly
+          reduces the likelihood of inode collisions in larger scenarios
+          involving multiple cells mounted into one AFS space.
+        '';
+      };
+
+      mountPoint = mkOption {
+        default = "/afs";
+        type = types.str;
+        description = ''
+          Mountpoint of the AFS file tree, conventionally
+          <literal>/afs</literal>. When set to a different value, only
+          cross-cells that use the same value can be accessed.
+        '';
+      };
+
+      sparse = mkOption {
+        default = true;
+        type = types.bool;
+        description = "Minimal cell list in /afs.";
+      };
+
+      startDisconnected = mkOption {
+        default = false;
+        type = types.bool;
+        description = ''
+          Start up in disconnected mode.  You need to execute
+          <literal>fs disco online</literal> (as root) to switch to
+          connected mode. Useful for roaming devices.
+        '';
+      };
+
+    };
+  };
+
+
+  ###### implementation
+
+  config = mkIf cfg.enable {
+
+    assertions = [
+      { assertion = cfg.afsdb || cfg.cellServDB != [];
+        message = "You should specify all cell-local database servers in config.services.openafsClient.cellServDB or set config.services.openafsClient.afsdb.";
+      }
+      { assertion = cfg.cellName != "";
+        message = "You must specify the local cell name in config.services.openafsClient.cellName.";
+      }
+    ];
+
+    environment.systemPackages = [ pkgs.openafs ];
+
+    environment.etc = {
+      clientCellServDB = {
+        source = pkgs.runCommand "CellServDB" {} ''
+          cat ${cellServDB} ${clientServDB} > $out
+        '';
+        target = "openafs/CellServDB";
+        mode = "0644";
+      };
+      clientCell = {
+        text = ''
+          ${cfg.cellName}
+        '';
+        target = "openafs/ThisCell";
+        mode = "0644";
+      };
+    };
+
+    systemd.services.afsd = {
+      description = "AFS client";
+      wantedBy = [ "multi-user.target" ];
+      after = singleton (if cfg.startDisconnected then  "network.target" else "network-online.target");
+      serviceConfig = { RemainAfterExit = true; };
+      restartIfChanged = false;
+
+      preStart = ''
+        mkdir -p -m 0755 ${cfg.mountPoint}
+        mkdir -m 0700 -p ${cfg.cache.directory}
+        ${pkgs.kmod}/bin/insmod ${openafsMod}/lib/modules/*/extra/openafs/libafs.ko.xz
+        ${openafsBin}/sbin/afsd \
+          -mountdir ${cfg.mountPoint} \
+          -confdir ${afsConfig} \
+          ${optionalString (!cfg.cache.diskless) "-cachedir ${cfg.cache.directory}"} \
+          -blocks ${toString cfg.cache.blocks} \
+          -chunksize ${toString cfg.cache.chunksize} \
+          ${optionalString cfg.cache.diskless "-memcache"} \
+          -inumcalc ${cfg.inumcalc} \
+          ${if cfg.fakestat then "-fakestat-all" else "-fakestat"} \
+          ${if cfg.sparse then "-dynroot-sparse" else "-dynroot"} \
+          ${optionalString cfg.afsdb "-afsdb"}
+        ${openafsBin}/bin/fs setcrypt ${if cfg.crypt then "on" else "off"}
+        ${optionalString cfg.startDisconnected "${openafsBin}/bin/fs discon offline"}
+      '';
+
+      # Doing this in preStop, because after these commands AFS is basically
+      # stopped, so systemd has nothing to do, just noticing it.  If done in
+      # postStop, then we get a hang + kernel oops, because AFS can't be
+      # stopped simply by sending signals to processes.
+      preStop = ''
+        ${pkgs.utillinux}/bin/umount ${cfg.mountPoint}
+        ${openafsBin}/sbin/afsd -shutdown
+        ${pkgs.kmod}/sbin/rmmod libafs
+      '';
+    };
+  };
+}
diff --git a/nixos/modules/services/network-filesystems/openafs/lib.nix b/nixos/modules/services/network-filesystems/openafs/lib.nix
new file mode 100644
index 000000000000..ecfc72d2eaf9
--- /dev/null
+++ b/nixos/modules/services/network-filesystems/openafs/lib.nix
@@ -0,0 +1,28 @@
+{ lib, ...}:
+
+let
+  inherit (lib) concatStringsSep mkOption types;
+
+in rec {
+
+  mkCellServDB = cellName: db: ''
+    >${cellName}
+  '' + (concatStringsSep "\n" (map (dbm: if (dbm.ip != "" && dbm.dnsname != "") then dbm.ip + " #" + dbm.dnsname else "")
+                                   db));
+
+  # CellServDB configuration type
+  cellServDBConfig = {
+    ip = mkOption {
+      type = types.str;
+      default = "";
+      example = "1.2.3.4";
+      description = "IP Address of a database server";
+    };
+    dnsname = mkOption {
+      type = types.str;
+      default = "";
+      example = "afs.example.org";
+      description = "DNS full-qualified domain name of a database server";
+    };
+  };
+}
diff --git a/nixos/modules/services/network-filesystems/openafs/server.nix b/nixos/modules/services/network-filesystems/openafs/server.nix
new file mode 100644
index 000000000000..429eb945ac9e
--- /dev/null
+++ b/nixos/modules/services/network-filesystems/openafs/server.nix
@@ -0,0 +1,260 @@
+{ config, pkgs, lib, ... }:
+
+with import ./lib.nix { inherit lib; };
+
+let
+  inherit (lib) concatStringsSep intersperse mapAttrsToList mkForce mkIf mkMerge mkOption optionalString types;
+
+  bosConfig = pkgs.writeText "BosConfig" (''
+    restrictmode 1
+    restarttime 16 0 0 0 0
+    checkbintime 3 0 5 0 0
+  '' + (optionalString cfg.roles.database.enable ''
+    bnode simple vlserver 1
+    parm ${openafsBin}/libexec/openafs/vlserver ${optionalString cfg.dottedPrincipals "-allow-dotted-principals"} ${cfg.roles.database.vlserverArgs}
+    end
+    bnode simple ptserver 1
+    parm ${openafsBin}/libexec/openafs/ptserver ${optionalString cfg.dottedPrincipals "-allow-dotted-principals"} ${cfg.roles.database.ptserverArgs}
+    end
+  '') + (optionalString cfg.roles.fileserver.enable ''
+    bnode dafs dafs 1
+    parm ${openafsBin}/libexec/openafs/dafileserver ${optionalString cfg.dottedPrincipals "-allow-dotted-principals"} -udpsize ${udpSizeStr} ${cfg.roles.fileserver.fileserverArgs}
+    parm ${openafsBin}/libexec/openafs/davolserver ${optionalString cfg.dottedPrincipals "-allow-dotted-principals"} -udpsize ${udpSizeStr} ${cfg.roles.fileserver.volserverArgs}
+    parm ${openafsBin}/libexec/openafs/salvageserver ${cfg.roles.fileserver.salvageserverArgs}
+    parm ${openafsBin}/libexec/openafs/dasalvager ${cfg.roles.fileserver.salvagerArgs}
+    end
+  '') + (optionalString (cfg.roles.database.enable && cfg.roles.backup.enable) ''
+    bnode simple buserver 1
+    parm ${openafsBin}/libexec/openafs/buserver ${cfg.roles.backup.buserverArgs} ${optionalString (cfg.roles.backup.cellServDB != []) "-cellservdb /etc/openafs/backup/"}
+    end
+  ''));
+
+  netInfo = if (cfg.advertisedAddresses != []) then
+    pkgs.writeText "NetInfo" ((concatStringsSep "\nf " cfg.advertisedAddresses) + "\n")
+  else null;
+
+  buCellServDB = pkgs.writeText "backup-cellServDB-${cfg.cellName}" (mkCellServDB cfg.cellName cfg.roles.backup.cellServDB);
+
+  cfg = config.services.openafsServer;
+
+  udpSizeStr = toString cfg.udpPacketSize;
+
+  openafsBin = lib.getBin pkgs.openafs;
+
+in {
+
+  options = {
+
+    services.openafsServer = {
+
+      enable = mkOption {
+        default = false;
+        type = types.bool;
+        description = ''
+          Whether to enable the OpenAFS server. An OpenAFS server needs a
+          complex setup. So, be aware that enabling this service and setting
+          some options does not give you a turn-key-ready solution. You need
+          at least a running Kerberos 5 setup, as OpenAFS relies on it for
+          authentication. See the Guide "QuickStartUnix" coming with
+          <literal>pkgs.openafs.doc</literal> for complete setup
+          instructions.
+        '';
+      };
+
+      advertisedAddresses = mkOption {
+        default = [];
+        description = "List of IP addresses this server is advertised under. See NetInfo(5)";
+      };
+
+      cellName = mkOption {
+        default = "";
+        type = types.str;
+        description = "Cell name, this server will serve.";
+        example = "grand.central.org";
+      };
+
+      cellServDB = mkOption {
+        default = [];
+        type = with types; listOf (submodule [ { options = cellServDBConfig;} ]);
+        description = "Definition of all cell-local database server machines.";
+      };
+
+      roles = {
+        fileserver = {
+          enable = mkOption {
+            default = true;
+            type = types.bool;
+            description = "Fileserver role, serves files and volumes from its local storage.";
+          };
+
+          fileserverArgs = mkOption {
+            default = "-vattachpar 128 -vhashsize 11 -L -rxpck 400 -cb 1000000";
+            type = types.str;
+            description = "Arguments to the dafileserver process. See its man page.";
+          };
+
+          volserverArgs = mkOption {
+            default = "";
+            type = types.str;
+            description = "Arguments to the davolserver process. See its man page.";
+            example = "-sync never";
+          };
+
+          salvageserverArgs = mkOption {
+            default = "";
+            type = types.str;
+            description = "Arguments to the salvageserver process. See its man page.";
+            example = "-showlog";
+          };
+
+          salvagerArgs = mkOption {
+            default = "";
+            type = types.str;
+            description = "Arguments to the dasalvager process. See its man page.";
+            example = "-showlog -showmounts";
+          };
+        };
+
+        database = {
+          enable = mkOption {
+            default = true;
+            type = types.bool;
+            description = ''
+              Database server role, maintains the Volume Location Database,
+              Protection Database (and Backup Database, see
+              <literal>backup</literal> role). There can be multiple
+              servers in the database role for replication, which then need
+              reliable network connection to each other.
+
+              Servers in this role appear in AFSDB DNS records or the
+              CellServDB.
+            '';
+          };
+
+          vlserverArgs = mkOption {
+            default = "";
+            type = types.str;
+            description = "Arguments to the vlserver process. See its man page.";
+            example = "-rxbind";
+          };
+
+          ptserverArgs = mkOption {
+            default = "";
+            type = types.str;
+            description = "Arguments to the ptserver process. See its man page.";
+            example = "-restricted -default_access S---- S-M---";
+          };
+        };
+
+        backup = {
+          enable = mkOption {
+            default = false;
+            type = types.bool;
+            description = ''
+              Backup server role. Use in conjunction with the
+              <literal>database</literal> role to maintain the Backup
+              Database. Normally only used in conjunction with tape storage
+              or IBM's Tivoli Storage Manager.
+            '';
+          };
+
+          buserverArgs = mkOption {
+            default = "";
+            type = types.str;
+            description = "Arguments to the buserver process. See its man page.";
+            example = "-p 8";
+          };
+
+          cellServDB = mkOption {
+            default = [];
+            type = with types; listOf (submodule [ { options = cellServDBConfig;} ]);
+            description = ''
+              Definition of all cell-local backup database server machines.
+              Use this when your cell uses less backup database servers than
+              other database server machines.
+            '';
+          };
+        };
+      };
+
+      dottedPrincipals= mkOption {
+        default = false;
+        type = types.bool;
+        description = ''
+          If enabled, allow principal names containing (.) dots. Enabling
+          this has security implications!
+        '';
+      };
+
+      udpPacketSize = mkOption {
+        default = 1310720;
+        type = types.int;
+        description = ''
+          UDP packet size to use in Bytes. Higher values can speed up
+          communications. The default of 1 MB is a sufficient in most
+          cases. Make sure to increase the kernel's UDP buffer size
+          accordingly via <literal>net.core(w|r|opt)mem_max</literal>
+          sysctl.
+        '';
+      };
+
+    };
+
+  };
+
+  config = mkIf cfg.enable {
+
+    assertions = [
+      { assertion = cfg.cellServDB != [];
+        message = "You must specify all cell-local database servers in config.services.openafsServer.cellServDB.";
+      }
+      { assertion = cfg.cellName != "";
+        message = "You must specify the local cell name in config.services.openafsServer.cellName.";
+      }
+    ];
+
+    environment.systemPackages = [ pkgs.openafs ];
+
+    environment.etc = {
+      bosConfig = {
+        source = bosConfig;
+        target = "openafs/BosConfig";
+        mode = "0644";
+      };
+      cellServDB = {
+        text = mkCellServDB cfg.cellName cfg.cellServDB;
+        target = "openafs/server/CellServDB";
+        mode = "0644";
+      };
+      thisCell = {
+        text = cfg.cellName;
+        target = "openafs/server/ThisCell";
+        mode = "0644";
+      };
+      buCellServDB = {
+        enable = (cfg.roles.backup.cellServDB != []);
+        text = mkCellServDB cfg.cellName cfg.roles.backup.cellServDB;
+        target = "openafs/backup/CellServDB";
+      };
+    };
+
+    systemd.services = {
+      openafs-server = {
+        description = "OpenAFS server";
+        after = [ "syslog.target" "network.target" ];
+        wantedBy = [ "multi-user.target" ];
+        restartIfChanged = false;
+        unitConfig.ConditionPathExists = [ "/etc/openafs/server/rxkad.keytab" ];
+        preStart = ''
+          mkdir -m 0755 -p /var/openafs
+          ${optionalString (netInfo != null) "cp ${netInfo} /var/openafs/netInfo"}
+          ${optionalString (cfg.roles.backup.cellServDB != []) "cp ${buCellServDB}"}
+        '';
+        serviceConfig = {
+          ExecStart = "${openafsBin}/bin/bosserver -nofork";
+          ExecStop = "${openafsBin}/bin/bos shutdown localhost -wait -localauth";
+        };
+      };
+    };
+  };
+}
diff --git a/nixos/modules/services/networking/bird.nix b/nixos/modules/services/networking/bird.nix
index 1a7a1e24b702..c25bd0fdc541 100644
--- a/nixos/modules/services/networking/bird.nix
+++ b/nixos/modules/services/networking/bird.nix
@@ -7,21 +7,27 @@ let
     let
       cfg = config.services.${variant};
       pkg = pkgs.${variant};
+      birdBin = if variant == "bird6" then "bird6" else "bird";
       birdc = if variant == "bird6" then "birdc6" else "birdc";
+      descr =
+        { bird = "1.9.x with IPv4 suport";
+          bird6 = "1.9.x with IPv6 suport";
+          bird2 = "2.x";
+        }.${variant};
       configFile = pkgs.stdenv.mkDerivation {
         name = "${variant}.conf";
         text = cfg.config;
         preferLocalBuild = true;
         buildCommand = ''
           echo -n "$text" > $out
-          ${pkg}/bin/${variant} -d -p -c $out
+          ${pkg}/bin/${birdBin} -d -p -c $out
         '';
       };
     in {
       ###### interface
       options = {
         services.${variant} = {
-          enable = mkEnableOption "BIRD Internet Routing Daemon";
+          enable = mkEnableOption "BIRD Internet Routing Daemon (${descr})";
           config = mkOption {
             type = types.lines;
             description = ''
@@ -36,12 +42,12 @@ let
       config = mkIf cfg.enable {
         environment.systemPackages = [ pkg ];
         systemd.services.${variant} = {
-          description = "BIRD Internet Routing Daemon";
+          description = "BIRD Internet Routing Daemon (${descr})";
           wantedBy = [ "multi-user.target" ];
           serviceConfig = {
             Type = "forking";
             Restart = "on-failure";
-            ExecStart = "${pkg}/bin/${variant} -c ${configFile} -u ${variant} -g ${variant}";
+            ExecStart = "${pkg}/bin/${birdBin} -c ${configFile} -u ${variant} -g ${variant}";
             ExecReload = "${pkg}/bin/${birdc} configure";
             ExecStop = "${pkg}/bin/${birdc} down";
             CapabilityBoundingSet = [ "CAP_CHOWN" "CAP_FOWNER" "CAP_DAC_OVERRIDE" "CAP_SETUID" "CAP_SETGID"
@@ -56,14 +62,15 @@ let
         users = {
           extraUsers.${variant} = {
             description = "BIRD Internet Routing Daemon user";
-            group = "${variant}";
+            group = variant;
           };
           extraGroups.${variant} = {};
         };
       };
     };
 
-  inherit (config.services) bird bird6;
-in {
-  imports = [(generic "bird") (generic "bird6")];
+in
+
+{
+  imports = map generic [ "bird" "bird6" "bird2" ];
 }
diff --git a/nixos/modules/services/networking/connman.nix b/nixos/modules/services/networking/connman.nix
index 546d27069232..c3ca6fbe725e 100644
--- a/nixos/modules/services/networking/connman.nix
+++ b/nixos/modules/services/networking/connman.nix
@@ -52,6 +52,15 @@ in {
         '';
       };
 
+      extraFlags = mkOption {
+        type = with types; listOf string;
+        default = [ ];
+        example = [ "--nodnsproxy" ];
+        description = ''
+          Extra flags to pass to connmand
+        '';
+      };
+
     };
 
   };
@@ -81,7 +90,7 @@ in {
         Type = "dbus";
         BusName = "net.connman";
         Restart = "on-failure";
-        ExecStart = "${pkgs.connman}/sbin/connmand --config=${configFile} --nodaemon";
+        ExecStart = "${pkgs.connman}/sbin/connmand --config=${configFile} --nodaemon ${toString cfg.extraFlags}";
         StandardOutput = "null";
       };
     };
diff --git a/nixos/modules/services/networking/dante.nix b/nixos/modules/services/networking/dante.nix
index a9a77f3412af..32acce51e692 100644
--- a/nixos/modules/services/networking/dante.nix
+++ b/nixos/modules/services/networking/dante.nix
@@ -47,7 +47,7 @@ in
 
     systemd.services.dante = {
       description   = "Dante SOCKS v4 and v5 compatible proxy server";
-      after         = [ "network.target" ];
+      after         = [ "network-online.target" ];
       wantedBy      = [ "multi-user.target" ];
 
       serviceConfig = {
diff --git a/nixos/modules/services/networking/dhcpcd.nix b/nixos/modules/services/networking/dhcpcd.nix
index d283c7624335..de0aa1a2c2c3 100644
--- a/nixos/modules/services/networking/dhcpcd.nix
+++ b/nixos/modules/services/networking/dhcpcd.nix
@@ -16,7 +16,7 @@ let
   # Don't start dhcpcd on explicitly configured interfaces or on
   # interfaces that are part of a bridge, bond or sit device.
   ignoredInterfaces =
-    map (i: i.name) (filter (i: if i.useDHCP != null then !i.useDHCP else i.ip4 != [ ] || i.ipAddress != null) interfaces)
+    map (i: i.name) (filter (i: if i.useDHCP != null then !i.useDHCP else i.ipv4.addresses != [ ]) interfaces)
     ++ mapAttrsToList (i: _: i) config.networking.sits
     ++ concatLists (attrValues (mapAttrs (n: v: v.interfaces) config.networking.bridges))
     ++ concatLists (attrValues (mapAttrs (n: v: v.interfaces) config.networking.vswitches))
@@ -156,11 +156,11 @@ in
     systemd.services.dhcpcd = let
       cfgN = config.networking;
       hasDefaultGatewaySet = (cfgN.defaultGateway != null && cfgN.defaultGateway.address != "")
-                          || (cfgN.defaultGateway6 != null && cfgN.defaultGateway6.address != "");
+                          && (!cfgN.enableIPv6 || (cfgN.defaultGateway6 != null && cfgN.defaultGateway6.address != ""));
     in
       { description = "DHCP Client";
 
-        wantedBy = optional (!hasDefaultGatewaySet) "network-online.target";
+        wantedBy = [ "multi-user.target" ] ++ optional (!hasDefaultGatewaySet) "network-online.target";
         after = [ "network.target" ];
         wants = [ "network.target" ];
 
diff --git a/nixos/modules/services/networking/firefox/sync-server.nix b/nixos/modules/services/networking/firefox/sync-server.nix
index a9f3fd65d76b..97d223a56cab 100644
--- a/nixos/modules/services/networking/firefox/sync-server.nix
+++ b/nixos/modules/services/networking/firefox/sync-server.nix
@@ -33,6 +33,8 @@ let
 in
 
 {
+  meta.maintainers = with lib.maintainers; [ nadrieril ];
+
   options = {
     services.firefox.syncserver = {
       enable = mkOption {
@@ -70,18 +72,6 @@ in
         '';
       };
 
-      user = mkOption {
-        type = types.str;
-        default = "syncserver";
-        description = "User account under which syncserver runs.";
-      };
-
-      group = mkOption {
-        type = types.str;
-        default = "syncserver";
-        description = "Group account under which syncserver runs.";
-      };
-
       publicUrl = mkOption {
         type = types.str;
         default = "http://localhost:5000/";
@@ -137,7 +127,9 @@ in
   config = mkIf cfg.enable {
 
     systemd.services.syncserver = let
-      syncServerEnv = pkgs.python.withPackages(ps: with ps; [ syncserver pasteScript ]);
+      syncServerEnv = pkgs.python.withPackages(ps: with ps; [ syncserver pasteScript requests ]);
+      user = "syncserver";
+      group = "syncserver";
     in {
       after = [ "network.target" ];
       description = "Firefox Sync Server";
@@ -145,43 +137,43 @@ in
       path = [ pkgs.coreutils syncServerEnv ];
 
       serviceConfig = {
-        User = cfg.user;
-        Group = cfg.group;
+        User = user;
+        Group = group;
         PermissionsStartOnly = true;
       };
 
       preStart = ''
         if ! test -e ${cfg.privateConfig}; then
-          mkdir -m 700 -p $(dirname ${cfg.privateConfig})
+          mkdir -p $(dirname ${cfg.privateConfig})
           echo  > ${cfg.privateConfig} '[syncserver]'
+          chmod 600 ${cfg.privateConfig}
           echo >> ${cfg.privateConfig} "secret = $(head -c 20 /dev/urandom | sha1sum | tr -d ' -')"
         fi
-        chown ${cfg.user}:${cfg.group} ${cfg.privateConfig}
+        chmod 600 ${cfg.privateConfig}
+        chmod 755 $(dirname ${cfg.privateConfig})
+        chown ${user}:${group} ${cfg.privateConfig}
+
       '' + optionalString (cfg.sqlUri == defaultSqlUri) ''
         if ! test -e $(dirname ${defaultDbLocation}); then
           mkdir -m 700 -p $(dirname ${defaultDbLocation})
-          chown ${cfg.user}:${cfg.group} $(dirname ${defaultDbLocation})
+          chown ${user}:${group} $(dirname ${defaultDbLocation})
         fi
+
         # Move previous database file if it exists
         oldDb="/var/db/firefox-sync-server.db"
         if test -f $oldDb; then
           mv $oldDb ${defaultDbLocation}
-          chown ${cfg.user}:${cfg.group} ${defaultDbLocation}
+          chown ${user}:${group} ${defaultDbLocation}
         fi
       '';
       serviceConfig.ExecStart = "${syncServerEnv}/bin/paster serve ${syncServerIni}";
     };
 
-    users.extraUsers = optionalAttrs (cfg.user == "syncserver")
-      (singleton {
-        name = "syncserver";
-        group = cfg.group;
-        isSystemUser = true;
-      });
-
-    users.extraGroups = optionalAttrs (cfg.group == "syncserver")
-      (singleton {
-        name = "syncserver";
-      });
+    users.users.syncserver = {
+      group = "syncserver";
+      isSystemUser = true;
+    };
+
+    users.groups.syncserver = {};
   };
 }
diff --git a/nixos/modules/services/networking/freeradius.nix b/nixos/modules/services/networking/freeradius.nix
new file mode 100644
index 000000000000..45cba1ce2770
--- /dev/null
+++ b/nixos/modules/services/networking/freeradius.nix
@@ -0,0 +1,72 @@
+{ config, lib, pkgs, ... }:
+
+with lib;
+
+let
+
+  cfg = config.services.freeradius;
+
+  freeradiusService = cfg:
+  {
+    description = "FreeRadius server";
+    wantedBy = ["multi-user.target"];
+    after = ["network-online.target"];
+    wants = ["network-online.target"];
+    preStart = ''
+      ${pkgs.freeradius}/bin/radiusd -C -d ${cfg.configDir} -l stdout
+    '';
+
+    serviceConfig = {
+        ExecStart = "${pkgs.freeradius}/bin/radiusd -f -d ${cfg.configDir} -l stdout -xx";
+        ExecReload = [
+          "${pkgs.freeradius}/bin/radiusd -C -d ${cfg.configDir} -l stdout"
+          "${pkgs.coreutils}/bin/kill -HUP $MAINPID"
+        ];
+        User = "radius";
+        ProtectSystem = "full";
+        ProtectHome = "on";
+        Restart = "on-failure";
+        RestartSec = 2;
+    };
+  };
+
+  freeradiusConfig = {
+    enable = mkEnableOption "the freeradius server";
+
+    configDir = mkOption {
+      type = types.path;
+      default = "/etc/raddb";
+      description = ''
+        The path of the freeradius server configuration directory.
+      '';
+    };
+
+  };
+
+in
+
+{
+
+  ###### interface
+
+  options = {
+    services.freeradius = freeradiusConfig;
+  };
+
+
+  ###### implementation
+
+  config = mkIf (cfg.enable) {
+
+    users = {
+      extraUsers.radius = {
+        /*uid = config.ids.uids.radius;*/
+        description = "Radius daemon user";
+      };
+    };
+
+    systemd.services.freeradius = freeradiusService cfg;
+
+  };
+
+}
diff --git a/nixos/modules/services/networking/gnunet.nix b/nixos/modules/services/networking/gnunet.nix
index 03ee54af4334..02cd53c6fa38 100644
--- a/nixos/modules/services/networking/gnunet.nix
+++ b/nixos/modules/services/networking/gnunet.nix
@@ -137,6 +137,8 @@ in
       after = [ "network.target" ];
       wantedBy = [ "multi-user.target" ];
       path = [ pkgs.gnunet pkgs.miniupnpc ];
+      environment.TMPDIR = "/tmp";
+      serviceConfig.PrivateTemp = true;
       serviceConfig.ExecStart = "${pkgs.gnunet}/lib/gnunet/libexec/gnunet-service-arm -c ${configFile}";
       serviceConfig.User = "gnunet";
       serviceConfig.UMask = "0007";
diff --git a/nixos/modules/services/networking/kresd.nix b/nixos/modules/services/networking/kresd.nix
index d0c19c4ecb71..aac02b811d71 100644
--- a/nixos/modules/services/networking/kresd.nix
+++ b/nixos/modules/services/networking/kresd.nix
@@ -46,6 +46,15 @@ in
         What addresses the server should listen on. (UDP+TCP 53)
       '';
     };
+    listenTLS = mkOption {
+      type = with types; listOf str;
+      default = [];
+      example = [ "198.51.100.1:853" "[2001:db8::1]:853" "853" ];
+      description = ''
+        Addresses on which kresd should provide DNS over TLS (see RFC 7858).
+        For detailed syntax see ListenStream in man systemd.socket.
+      '';
+    };
     # TODO: perhaps options for more common stuff like cache size or forwarding
   };
 
@@ -75,6 +84,18 @@ in
       socketConfig.FreeBind = true;
     };
 
+    systemd.sockets.kresd-tls = mkIf (cfg.listenTLS != []) rec {
+      wantedBy = [ "sockets.target" ];
+      before = wantedBy;
+      partOf = [ "kresd.socket" ];
+      listenStreams = cfg.listenTLS;
+      socketConfig = {
+        FileDescriptorName = "tls";
+        FreeBind = true;
+        Service = "kresd.service";
+      };
+    };
+
     systemd.sockets.kresd-control = rec {
       wantedBy = [ "sockets.target" ];
       before = wantedBy;
@@ -97,6 +118,8 @@ in
         Type = "notify";
         WorkingDirectory = cfg.cacheDir;
         Restart = "on-failure";
+        Sockets = [ "kresd.socket" "kresd-control.socket" ]
+          ++ optional (cfg.listenTLS != []) "kresd-tls.socket";
       };
 
       # Trust anchor goes from dns-root-data by default.
diff --git a/nixos/modules/services/networking/monero.nix b/nixos/modules/services/networking/monero.nix
new file mode 100644
index 000000000000..31379189f5de
--- /dev/null
+++ b/nixos/modules/services/networking/monero.nix
@@ -0,0 +1,238 @@
+{ config, lib, pkgs, ... }:
+
+with lib;
+
+let
+  cfg     = config.services.monero;
+  dataDir = "/var/lib/monero";
+
+  listToConf = option: list:
+    concatMapStrings (value: "${option}=${value}\n") list;
+
+  login = (cfg.rpc.user != null && cfg.rpc.password != null);
+
+  configFile = with cfg; pkgs.writeText "monero.conf" ''
+    log-file=/dev/stdout
+    data-dir=${dataDir}
+
+    ${optionalString mining.enable ''
+      start-mining=${mining.address}
+      mining-threads=${toString mining.threads}
+    ''}
+
+    rpc-bind-ip=${rpc.address}
+    rpc-bind-port=${toString rpc.port}
+    ${optionalString login ''
+      rpc-login=${rpc.user}:${rpc.password}
+    ''}
+    ${optionalString rpc.restricted ''
+      restrict-rpc=1
+    ''}
+
+    limit-rate-up=${toString limits.upload}
+    limit-rate-down=${toString limits.download}
+    max-concurrency=${toString limits.threads}
+    block-sync-size=${toString limits.syncSize}
+
+    ${listToConf "add-peer" extraNodes}
+    ${listToConf "add-priority-node" priorityNodes}
+    ${listToConf "add-exclusive-node" exclusiveNodes}
+
+    ${extraConfig}
+  '';
+
+in
+
+{
+
+  ###### interface
+
+  options = {
+
+    services.monero = {
+
+      enable = mkEnableOption "Monero node daemon.";
+
+      mining.enable = mkOption {
+        type = types.bool;
+        default = false;
+        description = ''
+          Whether to mine moneroj.
+        '';
+      };
+
+      mining.address = mkOption {
+        type = types.str;
+        default = "";
+        description = ''
+          Monero address where to send mining rewards.
+        '';
+      };
+
+      mining.threads = mkOption {
+        type = types.addCheck types.int (x: x>=0);
+        default = 0;
+        description = ''
+          Number of threads used for mining.
+          Set to <literal>0</literal> to use all available.
+        '';
+      };
+
+      rpc.user = mkOption {
+        type = types.nullOr types.str;
+        default = null;
+        description = ''
+          User name for RPC connections.
+        '';
+      };
+
+      rpc.password = mkOption {
+        type = types.str;
+        default = null;
+        description = ''
+          Password for RPC connections.
+        '';
+      };
+
+      rpc.address = mkOption {
+        type = types.str;
+        default = "127.0.0.1";
+        description = ''
+          IP address the RPC server will bind to.
+        '';
+      };
+
+      rpc.port = mkOption {
+        type = types.int;
+        default = 18081;
+        description = ''
+          Port the RPC server will bind to.
+        '';
+      };
+
+      rpc.restricted = mkOption {
+        type = types.bool;
+        default = false;
+        description = ''
+          Whether to restrict RPC to view only commands.
+        '';
+      };
+
+      limits.upload = mkOption {
+        type = types.addCheck types.int (x: x>=-1);
+        default = -1;
+        description = ''
+          Limit of the upload rate in kB/s.
+          Set to <literal>-1</literal> to leave unlimited.
+        '';
+      };
+
+      limits.download = mkOption {
+        type = types.addCheck types.int (x: x>=-1);
+        default = -1;
+        description = ''
+          Limit of the download rate in kB/s.
+          Set to <literal>-1</literal> to leave unlimited.
+        '';
+      };
+
+      limits.threads = mkOption {
+        type = types.addCheck types.int (x: x>=0);
+        default = 0;
+        description = ''
+          Maximum number of threads used for a parallel job.
+          Set to <literal>0</literal> to leave unlimited.
+        '';
+      };
+
+      limits.syncSize = mkOption {
+        type = types.addCheck types.int (x: x>=0);
+        default = 0;
+        description = ''
+          Maximum number of blocks to sync at once.
+          Set to <literal>0</literal> for adaptive.
+        '';
+      };
+
+      extraNodes = mkOption {
+        type = types.listOf types.str;
+        default = [ ];
+        description = ''
+          List of additional peer IP addresses to add to the local list.
+        '';
+      };
+
+      priorityNodes = mkOption {
+        type = types.listOf types.str;
+        default = [ ];
+        description = ''
+          List of peer IP addresses to connect to and
+          attempt to keep the connection open.
+        '';
+      };
+
+      exclusiveNodes = mkOption {
+        type = types.listOf types.str;
+        default = [ ];
+        description = ''
+          List of peer IP addresses to connect to *only*.
+          If given the other peer options will be ignored.
+        '';
+      };
+
+      extraConfig = mkOption {
+        type = types.lines;
+        default = "";
+        description = ''
+          Extra lines to be added verbatim to monerod configuration.
+        '';
+      };
+
+    };
+
+  };
+
+
+  ###### implementation
+
+  config = mkIf cfg.enable {
+
+    users.extraUsers = singleton {
+      name = "monero";
+      uid  = config.ids.uids.monero;
+      description = "Monero daemon user";
+      home = dataDir;
+      createHome = true;
+    };
+
+    users.extraGroups = singleton {
+      name = "monero";
+      gid  = config.ids.gids.monero;
+    };
+
+    systemd.services.monero = {
+      description = "monero daemon";
+      after    = [ "network.target" ];
+      wantedBy = [ "multi-user.target" ];
+
+      serviceConfig = {
+        User  = "monero";
+        Group = "monero";
+        ExecStart = "${pkgs.monero}/bin/monerod --config-file=${configFile} --non-interactive";
+        Restart = "always";
+        SuccessExitStatus = [ 0 1 ];
+      };
+    };
+
+   assertions = singleton {
+     assertion = cfg.mining.enable -> cfg.mining.address != "";
+     message   = ''
+       You need a Monero address to receive mining rewards:
+       specify one using option monero.mining.address.
+    '';
+   };
+
+  };
+
+}
+
diff --git a/nixos/modules/services/networking/mosquitto.nix b/nixos/modules/services/networking/mosquitto.nix
index 273ca797b98d..d8135f4d0ffa 100644
--- a/nixos/modules/services/networking/mosquitto.nix
+++ b/nixos/modules/services/networking/mosquitto.nix
@@ -212,7 +212,7 @@ in
       '' + concatStringsSep "\n" (
         mapAttrsToList (n: c:
           if c.hashedPassword != null then
-            "echo '${n}:${c.hashedPassword}' > ${cfg.dataDir}/passwd"
+            "echo '${n}:${c.hashedPassword}' >> ${cfg.dataDir}/passwd"
           else optionalString (c.password != null)
             "${pkgs.mosquitto}/bin/mosquitto_passwd -b ${cfg.dataDir}/passwd ${n} ${c.password}"
         ) cfg.users);
diff --git a/nixos/modules/services/networking/nat.nix b/nixos/modules/services/networking/nat.nix
index df4246d216d8..da3827c35e63 100644
--- a/nixos/modules/services/networking/nat.nix
+++ b/nixos/modules/services/networking/nat.nix
@@ -53,12 +53,36 @@ let
         -i ${cfg.externalInterface} -p ${fwd.proto} \
         --dport ${builtins.toString fwd.sourcePort} \
         -j DNAT --to-destination ${fwd.destination}
+
+      ${concatMapStrings (loopbackip:
+        let
+          m                = builtins.match "([0-9.]+):([0-9-]+)" fwd.destination;
+          destinationIP    = if (m == null) then throw "bad ip:ports `${fwd.destination}'" else elemAt m 0;
+          destinationPorts = if (m == null) then throw "bad ip:ports `${fwd.destination}'" else elemAt m 1;
+        in ''
+          # Allow connections to ${loopbackip}:${toString fwd.sourcePort} from the host itself
+          iptables -w -t nat -A OUTPUT \
+            -d ${loopbackip} -p ${fwd.proto} \
+            --dport ${builtins.toString fwd.sourcePort} \
+            -j DNAT --to-destination ${fwd.destination}
+
+          # Allow connections to ${loopbackip}:${toString fwd.sourcePort} from other hosts behind NAT
+          iptables -w -t nat -A nixos-nat-pre \
+            -d ${loopbackip} -p ${fwd.proto} \
+            --dport ${builtins.toString fwd.sourcePort} \
+            -j DNAT --to-destination ${fwd.destination}
+
+          iptables -w -t nat -A nixos-nat-post \
+            -d ${destinationIP} -p ${fwd.proto} \
+            --dport ${destinationPorts} \
+            -j SNAT --to-source ${loopbackip}
+        '') fwd.loopbackIPs}
     '') cfg.forwardPorts}
 
     ${optionalString (cfg.dmzHost != null) ''
       iptables -w -t nat -A nixos-nat-pre \
         -i ${cfg.externalInterface} -j DNAT \
-	--to-destination ${cfg.dmzHost}
+        --to-destination ${cfg.dmzHost}
     ''}
 
     ${cfg.extraCommands}
@@ -152,6 +176,13 @@ in
             example = "udp";
             description = "Protocol of forwarded connection";
           };
+
+          loopbackIPs = mkOption {
+            type = types.listOf types.str;
+            default = [];
+            example = literalExample ''[ "55.1.2.3" ]'';
+            description = "Public IPs for NAT reflection; for connections to `loopbackip:sourcePort' from the host itself and from other hosts behind NAT";
+          };
         };
       });
       default = [];
diff --git a/nixos/modules/services/networking/nixops-dns.nix b/nixos/modules/services/networking/nixops-dns.nix
new file mode 100644
index 000000000000..2bb1263b7fa2
--- /dev/null
+++ b/nixos/modules/services/networking/nixops-dns.nix
@@ -0,0 +1,79 @@
+{ config, lib, pkgs, ... }:
+
+with lib;
+let
+  pkg = pkgs.nixops-dns;
+  cfg = config.services.nixops-dns;
+in
+
+{
+  options = {
+    services.nixops-dns = {
+      enable = mkOption {
+        type = types.bool;
+        default = false;
+        description = ''
+          Whether to enable the nixops-dns resolution
+          of NixOps virtual machines via dnsmasq and fake domain name.
+        '';
+      };
+
+      user = mkOption {
+        type = types.str;
+        description = ''
+          The user the nixops-dns daemon should run as.
+          This should be the user, which is also used for nixops and
+          have the .nixops directory in its home.
+        '';
+      };
+
+      domain = mkOption {
+        type = types.str;
+        description = ''
+          Fake domain name to resolve to NixOps virtual machines.
+
+          For example "ops" will resolve "vm.ops".
+        '';
+        example = "ops";
+        default = "ops";
+      };
+
+      dnsmasq = mkOption {
+        type = types.bool;
+        default = true;
+        description = ''
+          Enable dnsmasq forwarding to nixops-dns. This allows to use
+          nixops-dns for `services.nixops-dns.domain` resolution
+          while forwarding the rest of the queries to original resolvers.
+        '';
+      };
+
+    };
+  };
+
+  config = mkIf cfg.enable {
+    systemd.services.nixops-dns = {
+      description = "nixops-dns: DNS server for resolving NixOps machines";
+      wantedBy = [ "multi-user.target" ];
+
+      serviceConfig = {
+        Type = "simple";
+        User = cfg.user;
+        ExecStart="${pkg}/bin/nixops-dns --domain=.${cfg.domain}";
+      };
+    };
+
+    services.dnsmasq = mkIf cfg.dnsmasq {
+      enable = true;
+      resolveLocalQueries = true;
+      servers = [
+        "/${cfg.domain}/127.0.0.1#5300"
+      ];
+      extraConfig = ''
+        bind-interfaces
+        listen-address=127.0.0.1
+      '';
+    };
+
+  };
+}
diff --git a/nixos/modules/services/networking/prosody.nix b/nixos/modules/services/networking/prosody.nix
index f34d8e172b46..9d7e6d6018af 100644
--- a/nixos/modules/services/networking/prosody.nix
+++ b/nixos/modules/services/networking/prosody.nix
@@ -179,6 +179,19 @@ in
         description = "Whether to enable the prosody server";
       };
 
+      package = mkOption {
+        type = types.package;
+        description = "Prosody package to use";
+        default = pkgs.prosody;
+        defaultText = "pkgs.prosody";
+        example = literalExample ''
+          pkgs.prosody.override {
+            withExtraLibs = [ pkgs.luaPackages.lpty ];
+            withCommunityModules = [ "auth_external" ];
+          };
+        '';
+      };
+
       allowRegistration = mkOption {
         type = types.bool;
         default = false;
@@ -306,7 +319,7 @@ in
         User = "prosody";
         Type = "forking";
         PIDFile = "/var/lib/prosody/prosody.pid";
-        ExecStart = "${pkgs.prosody}/bin/prosodyctl start";
+        ExecStart = "${cfg.package}/bin/prosodyctl start";
       };
     };
 
diff --git a/nixos/modules/services/networking/radvd.nix b/nixos/modules/services/networking/radvd.nix
index 0199502163a3..85d7f9e4a41b 100644
--- a/nixos/modules/services/networking/radvd.nix
+++ b/nixos/modules/services/networking/radvd.nix
@@ -59,24 +59,11 @@ in
 
     systemd.services.radvd =
       { description = "IPv6 Router Advertisement Daemon";
-
         wantedBy = [ "multi-user.target" ];
-
         after = [ "network.target" ];
-
-        path = [ pkgs.radvd ];
-
-        preStart = ''
-          mkdir -m 755 -p /run/radvd
-          chown radvd /run/radvd
-        '';
-
         serviceConfig =
-          { ExecStart = "@${pkgs.radvd}/sbin/radvd radvd"
-              + " -p /run/radvd/radvd.pid -m syslog -u radvd -C ${confFile}";
+          { ExecStart = "@${pkgs.radvd}/bin/radvd radvd -n -u radvd -C ${confFile}";
             Restart = "always";
-            Type = "forking";
-            PIDFile = "/run/radvd/radvd.pid";
           };
       };
 
diff --git a/nixos/modules/services/networking/rxe.nix b/nixos/modules/services/networking/rxe.nix
new file mode 100644
index 000000000000..a6a069ec50c0
--- /dev/null
+++ b/nixos/modules/services/networking/rxe.nix
@@ -0,0 +1,63 @@
+{ config, lib, pkgs, ... }:
+
+with lib;
+
+let
+  cfg = config.networking.rxe;
+
+  runRxeCmd = cmd: ifcs:
+    concatStrings ( map (x: "${pkgs.rdma-core}/bin/rxe_cfg -n ${cmd} ${x};") ifcs);
+
+  startScript = pkgs.writeShellScriptBin "rxe-start" ''
+    ${pkgs.rdma-core}/bin/rxe_cfg -n start
+    ${runRxeCmd "add" cfg.interfaces}
+    ${pkgs.rdma-core}/bin/rxe_cfg
+  '';
+
+  stopScript = pkgs.writeShellScriptBin "rxe-stop" ''
+    ${runRxeCmd "remove" cfg.interfaces }
+    ${pkgs.rdma-core}/bin/rxe_cfg -n stop
+  '';
+
+in {
+  ###### interface
+
+  options = {
+    networking.rxe = {
+      enable = mkEnableOption "RDMA over converged ethernet";
+      interfaces = mkOption {
+        type = types.listOf types.str;
+        default = [ ];
+        example = [ "eth0" ];
+        description = ''
+          Enable RDMA on the listed interfaces. The corresponding virtual
+          RDMA interfaces will be named rxe0 ... rxeN where the ordering
+          will be as they are named in the list. UDP port 4791 must be
+          open on the respective ethernet interfaces.
+        '';
+      };
+    };
+  };
+
+  ###### implementation
+
+  config = mkIf cfg.enable {
+
+    systemd.services.rxe = {
+      path = with pkgs; [ kmod rdma-core ];
+      description = "RoCE interfaces";
+
+      wantedBy = [ "multi-user.target" ];
+      after = [ "systemd-modules-load.service" "network-online.target" ];
+      wants = [ "network-pre.target" ];
+
+      serviceConfig = {
+        Type = "oneshot";
+        RemainAfterExit = true;
+        ExecStart = "${startScript}/bin/rxe-start";
+        ExecStop = "${stopScript}/bin/rxe-stop";
+      };
+    };
+  };
+}
+
diff --git a/nixos/modules/services/networking/ssh/sshd.nix b/nixos/modules/services/networking/ssh/sshd.nix
index d9b12d278160..e50c4dbacf36 100644
--- a/nixos/modules/services/networking/ssh/sshd.nix
+++ b/nixos/modules/services/networking/ssh/sshd.nix
@@ -375,9 +375,6 @@ in
         # LogLevel VERBOSE logs user's key fingerprint on login.
         # Needed to have a clear audit track of which key was used to log in.
         LogLevel VERBOSE
-
-        # Use kernel sandbox mechanisms where possible in unprivileged processes.
-        UsePrivilegeSeparation sandbox
       '';
 
     assertions = [{ assertion = if cfg.forwardX11 then cfgc.setXAuthLocation else true;
diff --git a/nixos/modules/services/security/hologram-agent.nix b/nixos/modules/services/security/hologram-agent.nix
index 6c53a2df6306..39ed506f7617 100644
--- a/nixos/modules/services/security/hologram-agent.nix
+++ b/nixos/modules/services/security/hologram-agent.nix
@@ -35,10 +35,9 @@ in {
   config = mkIf cfg.enable {
     boot.kernelModules = [ "dummy" ];
 
-    networking.interfaces.dummy0 = {
-      ipAddress = "169.254.169.254";
-      prefixLength = 32;
-    };
+    networking.interfaces.dummy0.ipv4.addresses = [
+      { address = "169.254.169.254"; prefixLength = 32; }
+    ];
 
     systemd.services.hologram-agent = {
       description = "Provide EC2 instance credentials to machines outside of EC2";
diff --git a/nixos/modules/services/security/physlock.nix b/nixos/modules/services/security/physlock.nix
index 30224d7fc6ba..97fbd6aae6e0 100644
--- a/nixos/modules/services/security/physlock.nix
+++ b/nixos/modules/services/security/physlock.nix
@@ -30,6 +30,20 @@ in
         '';
       };
 
+      allowAnyUser = mkOption {
+        type = types.bool;
+        default = false;
+        description = ''
+          Whether to allow any user to lock the screen. This will install a
+          setuid wrapper to allow any user to start physlock as root, which
+          is a minor security risk. Call the physlock binary to use this instead
+          of using the systemd service.
+
+          Note that you might need to relog to have the correct binary in your
+          PATH upon changing this option.
+        '';
+      };
+
       disableSysRq = mkOption {
         type = types.bool;
         default = true;
@@ -79,28 +93,36 @@ in
 
   ###### implementation
 
-  config = mkIf cfg.enable {
-
-    # for physlock -l and physlock -L
-    environment.systemPackages = [ pkgs.physlock ];
-
-    systemd.services."physlock" = {
-      enable = true;
-      description = "Physlock";
-      wantedBy = optional cfg.lockOn.suspend   "suspend.target"
-              ++ optional cfg.lockOn.hibernate "hibernate.target"
-              ++ cfg.lockOn.extraTargets;
-      before   = optional cfg.lockOn.suspend   "systemd-suspend.service"
-              ++ optional cfg.lockOn.hibernate "systemd-hibernate.service"
-              ++ cfg.lockOn.extraTargets;
-      serviceConfig.Type = "forking";
-      script = ''
-        ${pkgs.physlock}/bin/physlock -d${optionalString cfg.disableSysRq "s"}
-      '';
-    };
+  config = mkIf cfg.enable (mkMerge [
+    {
+
+      # for physlock -l and physlock -L
+      environment.systemPackages = [ pkgs.physlock ];
+
+      systemd.services."physlock" = {
+        enable = true;
+        description = "Physlock";
+        wantedBy = optional cfg.lockOn.suspend   "suspend.target"
+                ++ optional cfg.lockOn.hibernate "hibernate.target"
+                ++ cfg.lockOn.extraTargets;
+        before   = optional cfg.lockOn.suspend   "systemd-suspend.service"
+                ++ optional cfg.lockOn.hibernate "systemd-hibernate.service"
+                ++ cfg.lockOn.extraTargets;
+        serviceConfig = {
+          Type = "forking";
+          ExecStart = "${pkgs.physlock}/bin/physlock -d${optionalString cfg.disableSysRq "s"}";
+        };
+      };
 
-    security.pam.services.physlock = {};
+      security.pam.services.physlock = {};
 
-  };
+    }
+
+    (mkIf cfg.allowAnyUser {
+
+      security.wrappers.physlock = { source = "${pkgs.physlock}/bin/physlock"; user = "root"; };
+
+    })
+  ]);
 
 }
diff --git a/nixos/modules/services/security/tor.nix b/nixos/modules/services/security/tor.nix
index fa4aeb22ae9d..fed91756e769 100644
--- a/nixos/modules/services/security/tor.nix
+++ b/nixos/modules/services/security/tor.nix
@@ -88,6 +88,9 @@ let
     ${flip concatMapStrings v.map (p: ''
       HiddenServicePort ${toString p.port} ${p.destination}
     '')}
+    ${optionalString (v.authorizeClient != null) ''
+      HiddenServiceAuthorizeClient ${v.authorizeClient.authType} ${concatStringsSep "," v.authorizeClient.clientNames}
+    ''}
   ''))
   + cfg.extraConfig;
 
@@ -619,6 +622,33 @@ in
                }));
              };
 
+             authorizeClient = mkOption {
+               default = null;
+               description = "If configured, the hidden service is accessible for authorized clients only.";
+               type = types.nullOr (types.submodule ({config, ...}: {
+
+                 options = {
+
+                   authType = mkOption {
+                     type = types.enum [ "basic" "stealth" ];
+                     description = ''
+                       Either <literal>"basic"</literal> for a general-purpose authorization protocol
+                       or <literal>"stealth"</literal> for a less scalable protocol
+                       that also hides service activity from unauthorized clients.
+                     '';
+                   };
+
+                   clientNames = mkOption {
+                     type = types.nonEmptyListOf (types.strMatching "[A-Za-z0-9+-_]+");
+                     description = ''
+                       Only clients that are listed here are authorized to access the hidden service.
+                       Generated authorization data can be found in <filename>${torDirectory}/onion/$name/hostname</filename>.
+                       Clients need to put this authorization data in their configuration file using <literal>HidServAuth</literal>.
+                     '';
+                   };
+                 };
+               }));
+             };
           };
 
           config = {
diff --git a/nixos/modules/services/ttys/agetty.nix b/nixos/modules/services/ttys/agetty.nix
index 3429397d2cc2..b50de496e975 100644
--- a/nixos/modules/services/ttys/agetty.nix
+++ b/nixos/modules/services/ttys/agetty.nix
@@ -64,8 +64,8 @@ in
 
   config = {
     # Note: this is set here rather than up there so that changing
-    # nixosLabel would not rebuild manual pages
-    services.mingetty.greetingLine = mkDefault ''<<< Welcome to NixOS ${config.system.nixosLabel} (\m) - \l >>>'';
+    # nixos.label would not rebuild manual pages
+    services.mingetty.greetingLine = mkDefault ''<<< Welcome to NixOS ${config.system.nixos.label} (\m) - \l >>>'';
 
     systemd.services."getty@" =
       { serviceConfig.ExecStart = [
diff --git a/nixos/modules/services/web-servers/nginx/default.nix b/nixos/modules/services/web-servers/nginx/default.nix
index 100fabf902f8..dee877f1c114 100644
--- a/nixos/modules/services/web-servers/nginx/default.nix
+++ b/nixos/modules/services/web-servers/nginx/default.nix
@@ -578,6 +578,7 @@ in
         mkdir -p ${cfg.stateDir}/logs
         chmod 700 ${cfg.stateDir}
         chown -R ${cfg.user}:${cfg.group} ${cfg.stateDir}
+        ${cfg.package}/bin/nginx -c ${configFile} -p ${cfg.stateDir} -t
         '';
       serviceConfig = {
         ExecStart = "${cfg.package}/bin/nginx -c ${configFile} -p ${cfg.stateDir}";
diff --git a/nixos/modules/services/web-servers/traefik.nix b/nixos/modules/services/web-servers/traefik.nix
index 4ede4fc20967..b6c7fef21fb2 100644
--- a/nixos/modules/services/web-servers/traefik.nix
+++ b/nixos/modules/services/web-servers/traefik.nix
@@ -64,6 +64,16 @@ in {
       '';
     };
 
+    group = mkOption {
+      default = "traefik";
+      type = types.string;
+      example = "docker";
+      description = ''
+        Set the group that traefik runs under.
+        For the docker backend this needs to be set to <literal>docker</literal> instead.
+      '';
+    };
+
     package = mkOption {
       default = pkgs.traefik;
       defaultText = "pkgs.traefik";
@@ -87,7 +97,7 @@ in {
         ];
         Type = "simple";
         User = "traefik";
-        Group = "traefik";
+        Group = cfg.group;
         Restart = "on-failure";
         StartLimitInterval = 86400;
         StartLimitBurst = 5;
diff --git a/nixos/modules/services/web-servers/varnish/default.nix b/nixos/modules/services/web-servers/varnish/default.nix
index c3bc065d4651..d63fb954ef96 100644
--- a/nixos/modules/services/web-servers/varnish/default.nix
+++ b/nixos/modules/services/web-servers/varnish/default.nix
@@ -1,9 +1,13 @@
 { config, lib, pkgs, ...}:
+
+with lib;
+
 let
   cfg = config.services.varnish;
 
+  commandLine = "-f ${pkgs.writeText "default.vcl" cfg.config}" +
+      optionalString (cfg.extraModules != []) " -p vmod_path='${makeSearchPathOutput "lib" "lib/varnish/vmods" ([pkgs.varnish] ++ cfg.extraModules)}' -r vmod_path";
 in
-with lib;
 {
   options = {
     services.varnish = {
@@ -69,8 +73,7 @@ with lib;
       serviceConfig = {
         Type = "simple";
         PermissionsStartOnly = true;
-        ExecStart = "${pkgs.varnish}/sbin/varnishd -a ${cfg.http_address} -f ${pkgs.writeText "default.vcl" cfg.config} -n ${cfg.stateDir} -F ${cfg.extraCommandLine}"
-          + optionalString (cfg.extraModules != []) " -p vmod_path='${makeSearchPathOutput "lib" "lib/varnish/vmods" ([pkgs.varnish] ++ cfg.extraModules)}' -r vmod_path";
+        ExecStart = "${pkgs.varnish}/sbin/varnishd -a ${cfg.http_address} -n ${cfg.stateDir} -F ${cfg.extraCommandLine} ${commandLine}";
         Restart = "always";
         RestartSec = "5s";
         User = "varnish";
@@ -83,6 +86,14 @@ with lib;
 
     environment.systemPackages = [ pkgs.varnish ];
 
+    # check .vcl syntax at compile time (e.g. before nixops deployment)
+    system.extraDependencies = [
+      (pkgs.stdenv.mkDerivation {
+        name = "check-varnish-syntax";
+        buildCommand = "${pkgs.varnish}/sbin/varnishd -C ${commandLine} 2> $out";
+      })
+    ];
+
     users.extraUsers.varnish = {
       group = "varnish";
       uid = config.ids.uids.varnish;
diff --git a/nixos/modules/services/x11/desktop-managers/plasma5.nix b/nixos/modules/services/x11/desktop-managers/plasma5.nix
index 4c76ce0bb195..b794e2b12d73 100644
--- a/nixos/modules/services/x11/desktop-managers/plasma5.nix
+++ b/nixos/modules/services/x11/desktop-managers/plasma5.nix
@@ -66,6 +66,10 @@ in
       security.wrappers = {
         kcheckpass.source = "${lib.getBin plasma5.plasma-workspace}/lib/libexec/kcheckpass";
         "start_kdeinit".source = "${lib.getBin pkgs.kinit}/lib/libexec/kf5/start_kdeinit";
+        kwin_wayland = {
+          source = "${lib.getBin plasma5.kwin}/bin/kwin_wayland";
+          capabilities = "cap_sys_nice+ep";
+        };
       };
 
       environment.systemPackages = with pkgs; with qt5; with libsForQt5; with plasma5; with kdeApplications;
diff --git a/nixos/modules/system/activation/top-level.nix b/nixos/modules/system/activation/top-level.nix
index 0c50241f2edf..091a2e412eed 100644
--- a/nixos/modules/system/activation/top-level.nix
+++ b/nixos/modules/system/activation/top-level.nix
@@ -30,6 +30,8 @@ let
     let
       kernelPath = "${config.boot.kernelPackages.kernel}/" +
         "${config.system.boot.loader.kernelFile}";
+      initrdPath = "${config.system.build.initialRamdisk}/" +
+        "${config.system.boot.loader.initrdFile}";
     in ''
       mkdir $out
 
@@ -50,7 +52,7 @@ let
 
         echo -n "$kernelParams" > $out/kernel-params
 
-        ln -s ${config.system.build.initialRamdisk}/initrd $out/initrd
+        ln -s ${initrdPath} $out/initrd
 
         ln -s ${config.system.build.initialRamdiskSecretAppender}/bin/append-initrd-secrets $out
 
@@ -106,7 +108,7 @@ let
     if [] == failed then pkgs.stdenvNoCC.mkDerivation {
       name = let hn = config.networking.hostName;
                  nn = if (hn != "") then hn else "unnamed";
-          in "nixos-system-${nn}-${config.system.nixosLabel}";
+          in "nixos-system-${nn}-${config.system.nixos.label}";
       preferLocalBuild = true;
       allowSubstitutes = false;
       buildCommand = systemBuilder;
@@ -120,7 +122,7 @@ let
         config.system.build.installBootLoader
         or "echo 'Warning: do not know how to make this configuration bootable; please enable a boot loader.' 1>&2; true";
       activationScript = config.system.activationScripts.script;
-      nixosLabel = config.system.nixosLabel;
+      nixosLabel = config.system.nixos.label;
 
       configurationName = config.boot.loader.grub.configurationName;
 
@@ -179,6 +181,15 @@ in
       '';
     };
 
+    system.boot.loader.initrdFile = mkOption {
+      internal = true;
+      default = "initrd";
+      type = types.str;
+      description = ''
+        Name of the initrd file to be passed to the bootloader.
+      '';
+    };
+
     system.copySystemConfiguration = mkOption {
       type = types.bool;
       default = false;
diff --git a/nixos/modules/system/boot/binfmt.nix b/nixos/modules/system/boot/binfmt.nix
new file mode 100644
index 000000000000..15e84dc021e2
--- /dev/null
+++ b/nixos/modules/system/boot/binfmt.nix
@@ -0,0 +1,139 @@
+{ config, lib, ... }:
+let
+  inherit (lib) mkOption types optionalString;
+
+  cfg = config.boot.binfmtMiscRegistrations;
+
+  makeBinfmtLine = name: { recognitionType, offset, magicOrExtension
+                         , mask, preserveArgvZero, openBinary
+                         , matchCredentials, fixBinary, ...
+                         }: let
+    type = if recognitionType == "magic" then "M" else "E";
+    offset' = toString offset;
+    mask' = toString mask;
+    interpreter = "/run/binfmt/${name}";
+    flags = if !(matchCredentials -> openBinary)
+              then throw "boot.binfmtMiscRegistrations.${name}: you can't specify openBinary = false when matchCredentials = true."
+            else optionalString preserveArgvZero "P" +
+                 optionalString (openBinary && !matchCredentials) "O" +
+                 optionalString matchCredentials "C" +
+                 optionalString fixBinary "F";
+  in ":${name}:${type}:${offset'}:${magicOrExtension}:${mask'}:${interpreter}:${flags}";
+
+  binfmtFile = builtins.toFile "binfmt_nixos.conf"
+    (lib.concatStringsSep "\n" (lib.mapAttrsToList makeBinfmtLine cfg));
+
+  activationSnippet = name: { interpreter, ... }:
+    "ln -sf ${interpreter} /run/binfmt/${name}";
+  activationScript = ''
+    mkdir -p -m 0755 /run/binfmt
+    ${lib.concatStringsSep "\n" (lib.mapAttrsToList activationSnippet cfg)}
+  '';
+in {
+  options = {
+    boot.binfmtMiscRegistrations = mkOption {
+      default = {};
+
+      description = ''
+        Extra binary formats to register with the kernel.
+        See https://www.kernel.org/doc/html/latest/admin-guide/binfmt-misc.html for more details.
+      '';
+
+      type = types.attrsOf (types.submodule ({ config, ... }: {
+        options = {
+          recognitionType = mkOption {
+            default = "magic";
+            description = "Whether to recognize executables by magic number or extension.";
+            type = types.enum [ "magic" "extension" ];
+          };
+
+          offset = mkOption {
+            default = null;
+            description = "The byte offset of the magic number used for recognition.";
+            type = types.nullOr types.int;
+          };
+
+          magicOrExtension = mkOption {
+            description = "The magic number or extension to match on.";
+            type = types.str;
+          };
+
+          mask = mkOption {
+            default = null;
+            description =
+              "A mask to be ANDed with the byte sequence of the file before matching";
+            type = types.nullOr types.str;
+          };
+
+          interpreter = mkOption {
+            description = ''
+              The interpreter to invoke to run the program.
+
+              Note that the actual registration will point to
+              /run/binfmt/''${name}, so the kernel interpreter length
+              limit doesn't apply.
+            '';
+            type = types.path;
+          };
+
+          preserveArgvZero = mkOption {
+            default = false;
+            description = ''
+              Whether to pass the original argv[0] to the interpreter.
+
+              See the description of the 'P' flag in the kernel docs
+              for more details;
+            '';
+            type = types.bool;
+          };
+
+          openBinary = mkOption {
+            default = config.matchCredentials;
+            description = ''
+              Whether to pass the binary to the interpreter as an open
+              file descriptor, instead of a path.
+            '';
+            type = types.bool;
+          };
+
+          matchCredentials = mkOption {
+            default = false;
+            description = ''
+              Whether to launch with the credentials and security
+              token of the binary, not the interpreter (e.g. setuid
+              bit).
+
+              See the description of the 'C' flag in the kernel docs
+              for more details.
+
+              Implies/requires openBinary = true.
+            '';
+            type = types.bool;
+          };
+
+          fixBinary = mkOption {
+            default = false;
+            description = ''
+              Whether to open the interpreter file as soon as the
+              registration is loaded, rather than waiting for a
+              relevant file to be invoked.
+
+              See the description of the 'F' flag in the kernel docs
+              for more details.
+            '';
+            type = types.bool;
+          };
+        };
+      }));
+    };
+  };
+
+  config = lib.mkIf (cfg != {}) {
+    environment.etc."binfmt.d/nixos.conf".source = binfmtFile;
+    system.activationScripts.binfmt = activationScript;
+    systemd.additionalUpstreamSystemUnits =
+      [ "proc-sys-fs-binfmt_misc.automount"
+        "proc-sys-fs-binfmt_misc.mount"
+      ];
+  };
+}
diff --git a/nixos/modules/system/boot/kernel.nix b/nixos/modules/system/boot/kernel.nix
index d21908f84537..3bd7d3558269 100644
--- a/nixos/modules/system/boot/kernel.nix
+++ b/nixos/modules/system/boot/kernel.nix
@@ -5,7 +5,7 @@ with lib;
 let
 
   inherit (config.boot) kernelPatches;
-
+  inherit (config.boot.kernel) features;
   inherit (config.boot.kernelPackages) kernel;
 
   kernelModulesConf = pkgs.writeText "nixos.conf"
@@ -21,11 +21,25 @@ in
 
   options = {
 
+    boot.kernel.features = mkOption {
+      default = {};
+      example = literalExample "{ debug = true; }";
+      internal = true;
+      description = ''
+        This option allows to enable or disable certain kernel features.
+        It's not API, because it's about kernel feature sets, that
+        make sense for specific use cases. Mostly along with programs,
+        which would have separate nixos options.
+        `grep features pkgs/os-specific/linux/kernel/common-config.nix`
+      '';
+    };
+
     boot.kernelPackages = mkOption {
       default = pkgs.linuxPackages;
       apply = kernelPackages: kernelPackages.extend (self: super: {
         kernel = super.kernel.override {
           kernelPatches = super.kernel.kernelPatches ++ kernelPatches;
+          features = lib.recursiveUpdate super.kernel.features features;
         };
       });
       # We don't want to evaluate all of linuxPackages for the manual
@@ -170,7 +184,7 @@ in
       [ "loglevel=${toString config.boot.consoleLogLevel}" ] ++
       optionals config.boot.vesa [ "vga=0x317" ];
 
-    boot.kernel.sysctl."kernel.printk" = config.boot.consoleLogLevel;
+    boot.kernel.sysctl."kernel.printk" = mkDefault config.boot.consoleLogLevel;
 
     boot.kernelModules = [ "loop" "atkbd" ];
 
diff --git a/nixos/modules/system/boot/networkd.nix b/nixos/modules/system/boot/networkd.nix
index 9d2cea3ad165..eea10613ea58 100644
--- a/nixos/modules/system/boot/networkd.nix
+++ b/nixos/modules/system/boot/networkd.nix
@@ -94,7 +94,7 @@ let
   checkNetwork = checkUnitConfig "Network" [
     (assertOnlyFields [
       "Description" "DHCP" "DHCPServer" "IPForward" "IPMasquerade" "IPv4LL" "IPv4LLRoute"
-      "LLMNR" "MulticastDNS" "Domains" "Bridge" "Bond"
+      "LLMNR" "MulticastDNS" "Domains" "Bridge" "Bond" "IPv6PrivacyExtensions"
     ])
     (assertValueOneOf "DHCP" ["both" "none" "v4" "v6"])
     (assertValueOneOf "DHCPServer" boolValues)
@@ -104,6 +104,7 @@ let
     (assertValueOneOf "IPv4LLRoute" boolValues)
     (assertValueOneOf "LLMNR" boolValues)
     (assertValueOneOf "MulticastDNS" boolValues)
+    (assertValueOneOf "IPv6PrivacyExtensions" ["yes" "no" "prefer-public" "kernel"])
   ];
 
   checkAddress = checkUnitConfig "Address" [
@@ -700,7 +701,6 @@ in
 
     systemd.additionalUpstreamSystemUnits = [
       "systemd-networkd.service" "systemd-networkd-wait-online.service"
-      "org.freedesktop.network1.busname"
     ];
 
     systemd.network.units = mapAttrs' (n: v: nameValuePair "${n}.link" (linkToUnit n v)) cfg.links
diff --git a/nixos/modules/system/boot/plymouth.nix b/nixos/modules/system/boot/plymouth.nix
index e78fdf1311d3..f8fb8a64cb9b 100644
--- a/nixos/modules/system/boot/plymouth.nix
+++ b/nixos/modules/system/boot/plymouth.nix
@@ -10,7 +10,7 @@ let
 
   breezePlymouth = pkgs.breeze-plymouth.override {
     nixosBranding = true;
-    nixosVersion = config.system.nixosRelease;
+    nixosVersion = config.system.nixos.release;
   };
 
   themesEnv = pkgs.buildEnv {
diff --git a/nixos/modules/system/boot/resolved.nix b/nixos/modules/system/boot/resolved.nix
index 2147d43c4f19..4d9de020c84e 100644
--- a/nixos/modules/system/boot/resolved.nix
+++ b/nixos/modules/system/boot/resolved.nix
@@ -126,7 +126,7 @@ in
   config = mkIf cfg.enable {
 
     systemd.additionalUpstreamSystemUnits = [
-      "systemd-resolved.service" "org.freedesktop.resolve1.busname"
+      "systemd-resolved.service"
     ];
 
     systemd.services.systemd-resolved = {
diff --git a/nixos/modules/system/boot/stage-1-init.sh b/nixos/modules/system/boot/stage-1-init.sh
index b442386914ad..964ec68cfe2f 100644
--- a/nixos/modules/system/boot/stage-1-init.sh
+++ b/nixos/modules/system/boot/stage-1-init.sh
@@ -167,6 +167,7 @@ done
 # Load the required kernel modules.
 mkdir -p /lib
 ln -s @modulesClosure@/lib/modules /lib/modules
+ln -s @modulesClosure@/lib/firmware /lib/firmware
 echo @extraUtils@/bin/modprobe > /proc/sys/kernel/modprobe
 for i in @kernelModules@; do
     echo "loading module $(basename $i)..."
diff --git a/nixos/modules/system/boot/stage-1.nix b/nixos/modules/system/boot/stage-1.nix
index d6e3e3a87d01..df450be8c401 100644
--- a/nixos/modules/system/boot/stage-1.nix
+++ b/nixos/modules/system/boot/stage-1.nix
@@ -13,12 +13,14 @@ let
 
   kernelPackages = config.boot.kernelPackages;
   modulesTree = config.system.modulesTree;
+  firmware = config.hardware.firmware;
 
 
   # Determine the set of modules that we need to mount the root FS.
   modulesClosure = pkgs.makeModulesClosure {
     rootModules = config.boot.initrd.availableKernelModules ++ config.boot.initrd.kernelModules;
     kernel = modulesTree;
+    firmware = firmware;
     allowMissing = true;
   };
 
diff --git a/nixos/modules/system/boot/systemd.nix b/nixos/modules/system/boot/systemd.nix
index dd9ba7104485..aff46ea861a2 100644
--- a/nixos/modules/system/boot/systemd.nix
+++ b/nixos/modules/system/boot/systemd.nix
@@ -14,7 +14,6 @@ let
   upstreamSystemUnits =
     [ # Targets.
       "basic.target"
-      "busnames.target"
       "sysinit.target"
       "sockets.target"
       "exit.target"
@@ -47,6 +46,7 @@ let
 
       # Consoles.
       "getty.target"
+      "getty-pre.target"
       "getty@.service"
       "serial-getty@.service"
       "console-getty.service"
@@ -63,10 +63,7 @@ let
       "systemd-logind.service"
       "autovt@.service"
       "systemd-user-sessions.service"
-      "dbus-org.freedesktop.login1.service"
       "dbus-org.freedesktop.machine1.service"
-      "org.freedesktop.login1.busname"
-      "org.freedesktop.machine1.busname"
       "user@.service"
 
       # Journal.
@@ -99,7 +96,6 @@ let
       "swap.target"
       "dev-hugepages.mount"
       "dev-mqueue.mount"
-      "proc-sys-fs-binfmt_misc.mount"
       "sys-fs-fuse-connections.mount"
       "sys-kernel-config.mount"
       "sys-kernel-debug.mount"
@@ -155,19 +151,16 @@ let
       "systemd-tmpfiles-setup-dev.service"
 
       # Misc.
-      "org.freedesktop.systemd1.busname"
       "systemd-sysctl.service"
       "dbus-org.freedesktop.timedate1.service"
       "dbus-org.freedesktop.locale1.service"
       "dbus-org.freedesktop.hostname1.service"
-      "org.freedesktop.timedate1.busname"
-      "org.freedesktop.locale1.busname"
-      "org.freedesktop.hostname1.busname"
       "systemd-timedated.service"
       "systemd-localed.service"
       "systemd-hostnamed.service"
       "systemd-binfmt.service"
       "systemd-exit.service"
+      "systemd-update-done.service"
     ]
     ++ cfg.additionalUpstreamSystemUnits;
 
@@ -182,7 +175,6 @@ let
   upstreamUserUnits =
     [ "basic.target"
       "bluetooth.target"
-      "busnames.target"
       "default.target"
       "exit.target"
       "graphical-session-pre.target"
@@ -789,8 +781,7 @@ in
 
         # Keep a persistent journal. Note that systemd-tmpfiles will
         # set proper ownership/permissions.
-        # FIXME: revert to 0700 with systemd v233.
-        mkdir -m 0750 -p /var/log/journal
+        mkdir -m 0700 -p /var/log/journal
       '';
 
     users.extraUsers.systemd-network.uid = config.ids.uids.systemd-network;
@@ -887,7 +878,7 @@ in
     systemd.targets.local-fs.unitConfig.X-StopOnReconfiguration = true;
     systemd.targets.remote-fs.unitConfig.X-StopOnReconfiguration = true;
     systemd.targets.network-online.wantedBy = [ "multi-user.target" ];
-    systemd.services.systemd-binfmt.wants = [ "proc-sys-fs-binfmt_misc.automount" ];
+    systemd.services.systemd-binfmt.wants = [ "proc-sys-fs-binfmt_misc.mount" ];
 
     # Don't bother with certain units in containers.
     systemd.services.systemd-remount-fs.unitConfig.ConditionVirtualization = "!container";
diff --git a/nixos/modules/tasks/filesystems/zfs.nix b/nixos/modules/tasks/filesystems/zfs.nix
index 2c0a165887bd..30c54ddd0e4e 100644
--- a/nixos/modules/tasks/filesystems/zfs.nix
+++ b/nixos/modules/tasks/filesystems/zfs.nix
@@ -24,7 +24,11 @@ let
 
   kernel = config.boot.kernelPackages;
 
-  packages = if config.boot.zfs.enableUnstable then {
+  packages = if config.boot.zfs.enableLegacyCrypto then {
+    spl = kernel.splLegacyCrypto;
+    zfs = kernel.zfsLegacyCrypto;
+    zfsUser = pkgs.zfsLegacyCrypto;
+  } else if config.boot.zfs.enableUnstable then {
     spl = kernel.splUnstable;
     zfs = kernel.zfsUnstable;
     zfsUser = pkgs.zfsUnstable;
@@ -75,6 +79,27 @@ in
           '';
       };
 
+      enableLegacyCrypto = mkOption {
+        type = types.bool;
+        default = false;
+        description = ''
+          Enabling this option will allow you to continue to use the old format for
+          encrypted datasets. With the inclusion of stability patches the format of
+          encrypted datasets has changed. They can still be accessed and mounted but
+          in read-only mode mounted. It is highly recommended to convert them to
+          the new format.
+
+          This option is only for convenience to people that cannot convert their
+          datasets to the new format yet and it will be removed in due time.
+
+          For migration strategies from old format to this new one, check the Wiki:
+          https://nixos.wiki/wiki/NixOS_on_ZFS#Encrypted_Dataset_Format_Change
+
+          See https://github.com/zfsonlinux/zfs/pull/6864 for more details about
+          the stability patches.
+          '';
+      };
+
       extraPools = mkOption {
         type = types.listOf types.str;
         default = [];
diff --git a/nixos/modules/tasks/network-interfaces-scripted.nix b/nixos/modules/tasks/network-interfaces-scripted.nix
index 63d07832d105..8aa5163ce229 100644
--- a/nixos/modules/tasks/network-interfaces-scripted.nix
+++ b/nixos/modules/tasks/network-interfaces-scripted.nix
@@ -20,14 +20,8 @@ let
     "sys-subsystem-net-devices-${escapeSystemdPath interface}.device";
 
   interfaceIps = i:
-    i.ip4 ++ optionals cfg.enableIPv6 i.ip6
-    ++ optional (i.ipAddress != null) {
-      address = i.ipAddress;
-      prefixLength = i.prefixLength;
-    } ++ optional (cfg.enableIPv6 && i.ipv6Address != null) {
-      address = i.ipv6Address;
-      prefixLength = i.ipv6PrefixLength;
-    };
+    i.ipv4.addresses
+    ++ optionals cfg.enableIPv6 i.ipv6.addresses;
 
   destroyBond = i: ''
     while true; do
@@ -80,7 +74,7 @@ let
           else optional (dev != null && dev != "lo" && !config.boot.isContainer) (subsystemDevice dev);
 
         hasDefaultGatewaySet = (cfg.defaultGateway != null && cfg.defaultGateway.address != "")
-                            || (cfg.defaultGateway6 != null && cfg.defaultGateway6.address != "");
+                            || (cfg.enableIPv6 && cfg.defaultGateway6 != null && cfg.defaultGateway6.address != "");
 
         networkLocalCommands = {
           after = [ "network-setup.service" ];
@@ -185,33 +179,58 @@ let
             path = [ pkgs.iproute ];
             script =
               ''
-                # FIXME: shouldn't this be done in network-link?
-                echo "bringing up interface..."
-                ip link set "${i.name}" up
-
                 state="/run/nixos/network/addresses/${i.name}"
+                mkdir -p $(dirname "$state")
 
+                ${flip concatMapStrings ips (ip:
+                  let
+                    cidr = "${ip.address}/${toString ip.prefixLength}";
+                  in
+                  ''
+                    echo "${cidr}" >> $state
+                    echo -n "adding address ${cidr}... "
+                    if out=$(ip addr add "${cidr}" dev "${i.name}" 2>&1); then
+                      echo "done"
+                    elif ! echo "$out" | grep "File exists" >/dev/null 2>&1; then
+                      echo "failed"
+                      exit 1
+                    fi
+                  ''
+                )}
+
+                state="/run/nixos/network/routes/${i.name}"
                 mkdir -p $(dirname "$state")
 
-              '' + flip concatMapStrings (ips) (ip:
-                let
-                  address = "${ip.address}/${toString ip.prefixLength}";
-                in
-                ''
-                  echo "${address}" >> $state
-                  if out=$(ip addr add "${address}" dev "${i.name}" 2>&1); then
-                    echo "added ip ${address}"
-                  elif ! echo "$out" | grep "File exists" >/dev/null 2>&1; then
-                    echo "failed to add ${address}"
-                    exit 1
-                  fi
-                '');
+                ${flip concatMapStrings (i.ipv4.routes ++ i.ipv6.routes) (route:
+                  let
+                    cidr = "${route.address}/${toString route.prefixLength}";
+                    via = optionalString (route.via != null) ''via "${route.via}"'';
+                    options = concatStrings (mapAttrsToList (name: val: "${name} ${val} ") route.options);
+                  in
+                  ''
+                     echo "${cidr}" >> $state
+                     echo -n "adding route ${cidr}... "
+                     if out=$(ip route add "${cidr}" ${options} ${via} dev "${i.name}" 2>&1); then
+                       echo "done"
+                     elif ! echo "$out" | grep "File exists" >/dev/null 2>&1; then
+                       echo "failed"
+                       exit 1
+                     fi
+                  ''
+                )}
+              '';
             preStop = ''
+              state="/run/nixos/network/routes/${i.name}"
+              while read cidr; do
+                echo -n "deleting route $cidr... "
+                ip route del "$cidr" dev "${i.name}" >/dev/null 2>&1 && echo "done" || echo "failed"
+              done < "$state"
+              rm -f "$state"
+
               state="/run/nixos/network/addresses/${i.name}"
-              while read address; do
-                echo -n "deleting $address..."
-                ip addr del "$address" dev "${i.name}" >/dev/null 2>&1 || echo -n " Failed"
-                echo ""
+              while read cidr; do
+                echo -n "deleting address $cidr... "
+                ip addr del "$cidr" dev "${i.name}" >/dev/null 2>&1 && echo "done" || echo "failed"
               done < "$state"
               rm -f "$state"
             '';
diff --git a/nixos/modules/tasks/network-interfaces-systemd.nix b/nixos/modules/tasks/network-interfaces-systemd.nix
index 5d72ad0f1bde..c640e886fca8 100644
--- a/nixos/modules/tasks/network-interfaces-systemd.nix
+++ b/nixos/modules/tasks/network-interfaces-systemd.nix
@@ -9,14 +9,8 @@ let
   interfaces = attrValues cfg.interfaces;
 
   interfaceIps = i:
-    i.ip4 ++ optionals cfg.enableIPv6 i.ip6
-    ++ optional (i.ipAddress != null) {
-      address = i.ipAddress;
-      prefixLength = i.prefixLength;
-    } ++ optional (cfg.enableIPv6 && i.ipv6Address != null) {
-      address = i.ipv6Address;
-      prefixLength = i.ipv6PrefixLength;
-    };
+    i.ipv4.addresses
+    ++ optionals cfg.enableIPv6 i.ipv6.addresses;
 
   dhcpStr = useDHCP: if useDHCP == true || useDHCP == null then "both" else "none";
 
@@ -91,6 +85,7 @@ in
             (if i.useDHCP != null then i.useDHCP else cfg.useDHCP && interfaceIps i == [ ]));
           address = flip map (interfaceIps i)
             (ip: "${ip.address}/${toString ip.prefixLength}");
+          networkConfig.IPv6PrivacyExtensions = "kernel";
         } ];
       })))
       (mkMerge (flip mapAttrsToList cfg.bridges (name: bridge: {
diff --git a/nixos/modules/tasks/network-interfaces.nix b/nixos/modules/tasks/network-interfaces.nix
index f4851988d63d..5036b701bd86 100644
--- a/nixos/modules/tasks/network-interfaces.nix
+++ b/nixos/modules/tasks/network-interfaces.nix
@@ -1,4 +1,4 @@
-{ config, lib, pkgs, utils, stdenv, ... }:
+{ config, options, lib, pkgs, utils, stdenv, ... }:
 
 with lib;
 with utils;
@@ -101,7 +101,7 @@ let
         address = mkOption {
           type = types.str;
           description = ''
-            IPv${toString v} address of the interface.  Leave empty to configure the
+            IPv${toString v} address of the interface. Leave empty to configure the
             interface using DHCP.
           '';
         };
@@ -116,6 +116,40 @@ let
       };
     };
 
+  routeOpts = v:
+  { options = {
+      address = mkOption {
+        type = types.str;
+        description = "IPv${toString v} address of the network.";
+      };
+
+      prefixLength = mkOption {
+        type = types.addCheck types.int (n: n >= 0 && n <= (if v == 4 then 32 else 128));
+        description = ''
+          Subnet mask of the network, specified as the number of
+          bits in the prefix (<literal>${if v == 4 then "24" else "64"}</literal>).
+        '';
+      };
+
+      via = mkOption {
+        type = types.nullOr types.str;
+        default = null;
+        description = "IPv${toString v} address of the next hop.";
+      };
+
+      options = mkOption {
+        type = types.attrsOf types.str;
+        default = { };
+        example = { mtu = "1492"; window = "524288"; };
+        description = ''
+          Other route options. See the symbol <literal>OPTION</literal>
+          in the <literal>ip-route(8)</literal> manual page for the details.
+        '';
+      };
+
+    };
+  };
+
   gatewayCoerce = address: { inherit address; };
 
   gatewayOpts = { ... }: {
@@ -148,13 +182,22 @@ let
   interfaceOpts = { name, ... }: {
 
     options = {
-
       name = mkOption {
         example = "eth0";
         type = types.str;
         description = "Name of the interface.";
       };
 
+      preferTempAddress = mkOption {
+        type = types.bool;
+        default = cfg.enableIPv6;
+        defaultText = literalExample "config.networking.enableIpv6";
+        description = ''
+          When using SLAAC prefer a temporary (IPv6) address over the EUI-64
+          address for originating connections. This is used to reduce tracking.
+        '';
+      };
+
       useDHCP = mkOption {
         type = types.nullOr types.bool;
         default = null;
@@ -165,7 +208,7 @@ let
         '';
       };
 
-      ip4 = mkOption {
+      ipv4.addresses = mkOption {
         default = [ ];
         example = [
           { address = "10.0.0.1"; prefixLength = 16; }
@@ -177,7 +220,7 @@ let
         '';
       };
 
-      ip6 = mkOption {
+      ipv6.addresses = mkOption {
         default = [ ];
         example = [
           { address = "fdfd:b3f0:482::1"; prefixLength = 48; }
@@ -189,50 +232,27 @@ let
         '';
       };
 
-      ipAddress = mkOption {
-        default = null;
-        example = "10.0.0.1";
-        type = types.nullOr types.str;
-        description = ''
-          IP address of the interface.  Leave empty to configure the
-          interface using DHCP.
-        '';
-      };
-
-      prefixLength = mkOption {
-        default = null;
-        example = 24;
-        type = types.nullOr types.int;
-        description = ''
-          Subnet mask of the interface, specified as the number of
-          bits in the prefix (<literal>24</literal>).
-        '';
-      };
-
-      subnetMask = mkOption {
-        default = null;
-        description = ''
-          Defunct, supply the prefix length instead.
-        '';
-      };
-
-      ipv6Address = mkOption {
-        default = null;
-        example = "2001:1470:fffd:2098::e006";
-        type = types.nullOr types.str;
+      ipv4.routes = mkOption {
+        default = [];
+        example = [
+          { address = "10.0.0.0"; prefixLength = 16; }
+          { address = "192.168.2.0"; prefixLength = 24; via = "192.168.1.1"; }
+        ];
+        type = with types; listOf (submodule (routeOpts 4));
         description = ''
-          IPv6 address of the interface.  Leave empty to configure the
-          interface using NDP.
+          List of extra IPv4 static routes that will be assigned to the interface.
         '';
       };
 
-      ipv6PrefixLength = mkOption {
-        default = 64;
-        example = 64;
-        type = types.int;
+      ipv6.routes = mkOption {
+        default = [];
+        example = [
+          { address = "fdfd:b3f0::"; prefixLength = 48; }
+          { address = "2001:1470:fffd:2098::"; prefixLength = 64; via = "fdfd:b3f0::1"; }
+        ];
+        type = with types; listOf (submodule (routeOpts 6));
         description = ''
-          Subnet mask of the interface, specified as the number of
-          bits in the prefix (<literal>64</literal>).
+          List of extra IPv6 static routes that will be assigned to the interface.
         '';
       };
 
@@ -307,6 +327,32 @@ let
       name = mkDefault name;
     };
 
+    # Renamed or removed options
+    imports =
+      let
+        defined = x: x != "_mkMergedOptionModule";
+      in [
+        (mkRenamedOptionModule [ "ip4" ] [ "ipv4" "addresses"])
+        (mkRenamedOptionModule [ "ip6" ] [ "ipv6" "addresses"])
+        (mkRemovedOptionModule [ "subnetMask" ] ''
+          Supply a prefix length instead; use option
+          networking.interfaces.<name>.ipv{4,6}.addresses'')
+        (mkMergedOptionModule
+          [ [ "ipAddress" ] [ "prefixLength" ] ]
+          [ "ipv4" "addresses" ]
+          (cfg: with cfg;
+            optional (defined ipAddress && defined prefixLength)
+            { address = ipAddress; prefixLength = prefixLength; }))
+        (mkMergedOptionModule
+          [ [ "ipv6Address" ] [ "ipv6PrefixLength" ] ]
+          [ "ipv6" "addresses" ]
+          (cfg: with cfg;
+            optional (defined ipv6Address && defined ipv6PrefixLength)
+            { address = ipv6Address; prefixLength = ipv6PrefixLength; }))
+
+        ({ options.warnings = options.warnings; })
+      ];
+
   };
 
   hexChars = stringToCharacters "0123456789abcdef";
@@ -443,7 +489,7 @@ in
     networking.interfaces = mkOption {
       default = {};
       example =
-        { eth0.ip4 = [ {
+        { eth0.ipv4 = [ {
             address = "131.211.84.78";
             prefixLength = 25;
           } ];
@@ -922,13 +968,10 @@ in
 
   config = {
 
+    warnings = concatMap (i: i.warnings) interfaces;
+
     assertions =
       (flip map interfaces (i: {
-        assertion = i.subnetMask == null;
-        message = ''
-          The networking.interfaces."${i.name}".subnetMask option is defunct. Use prefixLength instead.
-        '';
-      })) ++ (flip map interfaces (i: {
         # With the linux kernel, interface name length is limited by IFNAMSIZ
         # to 16 bytes, including the trailing null byte.
         # See include/linux/if.h in the kernel sources
@@ -937,10 +980,15 @@ in
           The name of networking.interfaces."${i.name}" is too long, it needs to be less than 16 characters.
         '';
       })) ++ (flip map slaveIfs (i: {
-        assertion = i.ip4 == [ ] && i.ipAddress == null && i.ip6 == [ ] && i.ipv6Address == null;
+        assertion = i.ipv4.addresses == [ ] && i.ipv6.addresses == [ ];
         message = ''
           The networking.interfaces."${i.name}" must not have any defined ips when it is a slave.
         '';
+      })) ++ (flip map interfaces (i: {
+        assertion = i.preferTempAddress -> cfg.enableIPv6;
+        message = ''
+          Temporary addresses are only needed when IPv6 is enabled.
+        '';
       })) ++ [
         {
           assertion = cfg.hostId == null || (stringLength cfg.hostId == 8 && isHexString cfg.hostId);
@@ -963,9 +1011,10 @@ in
       "net.ipv6.conf.all.disable_ipv6" = mkDefault (!cfg.enableIPv6);
       "net.ipv6.conf.default.disable_ipv6" = mkDefault (!cfg.enableIPv6);
       "net.ipv6.conf.all.forwarding" = mkDefault (any (i: i.proxyARP) interfaces);
-    } // listToAttrs (concatLists (flip map (filter (i: i.proxyARP) interfaces)
-        (i: flip map [ "4" "6" ] (v: nameValuePair "net.ipv${v}.conf.${i.name}.proxy_arp" true))
-      ));
+    } // listToAttrs (flip concatMap (filter (i: i.proxyARP) interfaces)
+        (i: flip map [ "4" "6" ] (v: nameValuePair "net.ipv${v}.conf.${i.name}.proxy_arp" true)))
+      // listToAttrs (flip map (filter (i: i.preferTempAddress) interfaces)
+        (i: nameValuePair "net.ipv6.conf.${i.name}.use_tempaddr" 2));
 
     # Capabilities won't work unless we have at-least a 4.3 Linux
     # kernel because we need the ambient capability
@@ -1073,6 +1122,9 @@ in
           '' + optionalString (i.mtu != null) ''
             echo "setting MTU to ${toString i.mtu}..."
             ip link set "${i.name}" mtu "${toString i.mtu}"
+          '' + ''
+            echo -n "bringing up interface... "
+            ip link set "${i.name}" up && echo "done" || (echo "failed"; exit 1)
           '';
       })));
 
diff --git a/nixos/modules/virtualisation/brightbox-image.nix b/nixos/modules/virtualisation/brightbox-image.nix
index 08bbcfd9d7c2..39a655b4c104 100644
--- a/nixos/modules/virtualisation/brightbox-image.nix
+++ b/nixos/modules/virtualisation/brightbox-image.nix
@@ -26,7 +26,7 @@ in
               rm $diskImageBase
               popd
             '';
-          diskImageBase = "nixos-image-${config.system.nixosLabel}-${pkgs.stdenv.system}.raw";
+          diskImageBase = "nixos-image-${config.system.nixos.label}-${pkgs.stdenv.system}.raw";
           buildInputs = [ pkgs.utillinux pkgs.perl ];
           exportReferencesGraph =
             [ "closure" config.system.build.toplevel ];
diff --git a/nixos/modules/virtualisation/google-compute-image.nix b/nixos/modules/virtualisation/google-compute-image.nix
index 2fb38059b261..155a33b3bb37 100644
--- a/nixos/modules/virtualisation/google-compute-image.nix
+++ b/nixos/modules/virtualisation/google-compute-image.nix
@@ -14,7 +14,7 @@ in
       PATH=$PATH:${pkgs.stdenv.lib.makeBinPath [ pkgs.gnutar pkgs.gzip ]}
       pushd $out
       mv $diskImage disk.raw
-      tar -Szcf nixos-image-${config.system.nixosLabel}-${pkgs.stdenv.system}.raw.tar.gz disk.raw
+      tar -Szcf nixos-image-${config.system.nixos.label}-${pkgs.stdenv.system}.raw.tar.gz disk.raw
       rm $out/disk.raw
       popd
     '';
diff --git a/nixos/modules/virtualisation/lxd.nix b/nixos/modules/virtualisation/lxd.nix
index b1ff0337994e..4988886baf60 100644
--- a/nixos/modules/virtualisation/lxd.nix
+++ b/nixos/modules/virtualisation/lxd.nix
@@ -38,6 +38,15 @@ in
     environment.systemPackages =
       [ pkgs.lxd ];
 
+    security.apparmor = {
+      enable = true;
+      profiles = [
+        "${pkgs.lxc}/etc/apparmor.d/usr.bin.lxc-start"
+        "${pkgs.lxc}/etc/apparmor.d/lxc-containers"
+      ];
+      packages = [ pkgs.lxc ];
+    };
+
     systemd.services.lxd =
       { description = "LXD Container Management Daemon";
 
@@ -47,6 +56,10 @@ in
         # TODO(wkennington): Add lvm2 and thin-provisioning-tools
         path = with pkgs; [ acl rsync gnutar xz btrfs-progs gzip dnsmasq squashfsTools iproute iptables ];
 
+        preStart = ''
+          mkdir -m 0755 -p /var/lib/lxc/rootfs
+        '';
+
         serviceConfig.ExecStart = "@${pkgs.lxd.bin}/bin/lxd lxd --syslog --group lxd";
         serviceConfig.Type = "simple";
         serviceConfig.KillMode = "process"; # when stopping, leave the containers alone
diff --git a/nixos/modules/virtualisation/virtualbox-host.nix b/nixos/modules/virtualisation/virtualbox-host.nix
index bb0c38bd4eb8..7413e12c8f3d 100644
--- a/nixos/modules/virtualisation/virtualbox-host.nix
+++ b/nixos/modules/virtualisation/virtualbox-host.nix
@@ -124,7 +124,7 @@ in
           '';
       };
 
-    networking.interfaces.vboxnet0.ip4 = [ { address = "192.168.56.1"; prefixLength = 24; } ];
+    networking.interfaces.vboxnet0.ipv4.addresses = [{ address = "192.168.56.1"; prefixLength = 24; }];
     # Make sure NetworkManager won't assume this interface being up
     # means we have internet access.
     networking.networkmanager.unmanaged = ["vboxnet0"];
diff --git a/nixos/modules/virtualisation/virtualbox-image.nix b/nixos/modules/virtualisation/virtualbox-image.nix
index a544403e6bed..64f145f77ca3 100644
--- a/nixos/modules/virtualisation/virtualbox-image.nix
+++ b/nixos/modules/virtualisation/virtualbox-image.nix
@@ -22,7 +22,7 @@ in {
 
   config = {
     system.build.virtualBoxOVA = import ../../lib/make-disk-image.nix {
-      name = "nixos-ova-${config.system.nixosLabel}-${pkgs.stdenv.system}";
+      name = "nixos-ova-${config.system.nixos.label}-${pkgs.stdenv.system}";
 
       inherit pkgs lib config;
       partitionTableType = "legacy";
@@ -37,7 +37,7 @@ in {
           VBoxManage internalcommands createrawvmdk -filename disk.vmdk -rawdisk $diskImage
 
           echo "creating VirtualBox VM..."
-          vmName="NixOS ${config.system.nixosLabel} (${pkgs.stdenv.system})"
+          vmName="NixOS ${config.system.nixos.label} (${pkgs.stdenv.system})"
           VBoxManage createvm --name "$vmName" --register \
             --ostype ${if pkgs.stdenv.system == "x86_64-linux" then "Linux26_64" else "Linux26"}
           VBoxManage modifyvm "$vmName" \
@@ -53,7 +53,7 @@ in {
 
           echo "exporting VirtualBox VM..."
           mkdir -p $out
-          fn="$out/nixos-${config.system.nixosLabel}-${pkgs.stdenv.system}.ova"
+          fn="$out/nixos-${config.system.nixos.label}-${pkgs.stdenv.system}.ova"
           VBoxManage export "$vmName" --output "$fn"
 
           rm -v $diskImage
diff --git a/nixos/modules/virtualisation/xen-dom0.nix b/nixos/modules/virtualisation/xen-dom0.nix
index c7656bc309c0..afc5a42f8b4e 100644
--- a/nixos/modules/virtualisation/xen-dom0.nix
+++ b/nixos/modules/virtualisation/xen-dom0.nix
@@ -35,24 +35,19 @@ in
       description = ''
         The package used for Xen binary.
       '';
+      relatedPackages = [ "xen" "xen-light" ];
     };
 
-    virtualisation.xen.qemu = mkOption {
-      type = types.path;
-      defaultText = "\${pkgs.xen}/lib/xen/bin/qemu-system-i386";
-      example = literalExample "''${pkgs.qemu_xen-light}/bin/qemu-system-i386";
-      description = ''
-        The qemu binary to use for Dom-0 backend.
-      '';
-    };
-
-    virtualisation.xen.qemu-package = mkOption {
+    virtualisation.xen.package-qemu = mkOption {
       type = types.package;
       defaultText = "pkgs.xen";
       example = literalExample "pkgs.qemu_xen-light";
       description = ''
-        The package with qemu binaries for xendomains.
+        The package with qemu binaries for dom0 qemu and xendomains.
       '';
+      relatedPackages = [ "xen"
+                          { name = "qemu_xen-light"; comment = "For use with pkgs.xen-light."; }
+                        ];
     };
 
     virtualisation.xen.bootParams =
@@ -158,8 +153,7 @@ in
     } ];
 
     virtualisation.xen.package = mkDefault pkgs.xen;
-    virtualisation.xen.qemu = mkDefault "${pkgs.xen}/lib/xen/bin/qemu-system-i386";
-    virtualisation.xen.qemu-package = mkDefault pkgs.xen;
+    virtualisation.xen.package-qemu = mkDefault pkgs.xen;
     virtualisation.xen.stored = mkDefault "${cfg.package}/bin/oxenstored";
 
     environment.systemPackages = [ cfg.package ];
@@ -339,7 +333,8 @@ in
       after = [ "xen-console.service" ];
       requires = [ "xen-store.service" ];
       serviceConfig.ExecStart = ''
-        ${cfg.qemu} -xen-attach -xen-domid 0 -name dom0 -M xenpv \
+        ${cfg.package-qemu}/${cfg.package-qemu.qemu-system-i386} \
+           -xen-attach -xen-domid 0 -name dom0 -M xenpv \
            -nographic -monitor /dev/null -serial /dev/null -parallel /dev/null
         '';
     };
@@ -448,7 +443,7 @@ in
       before = [ "dhcpd.service" ];
       restartIfChanged = false;
       serviceConfig.RemainAfterExit = "yes";
-      path = [ cfg.package cfg.qemu-package ];
+      path = [ cfg.package cfg.package-qemu ];
       environment.XENDOM_CONFIG = "${cfg.package}/etc/sysconfig/xendomains";
       preStart = "mkdir -p /var/lock/subsys -m 755";
       serviceConfig.ExecStart = "${cfg.package}/etc/init.d/xendomains start";
diff --git a/nixos/release-combined.nix b/nixos/release-combined.nix
index 3564e6298256..9d4a551a958b 100644
--- a/nixos/release-combined.nix
+++ b/nixos/release-combined.nix
@@ -2,7 +2,7 @@
 # and nixos-14.04). The channel is updated every time the ‘tested’ job
 # succeeds, and all other jobs have finished (they may fail).
 
-{ nixpkgs ? { outPath = ./..; revCount = 56789; shortRev = "gfedcba"; }
+{ nixpkgs ? { outPath = (import ../lib).cleanSource ./..; revCount = 56789; shortRev = "gfedcba"; }
 , stableBranch ? false
 , supportedSystems ? [ "x86_64-linux" ]
 , limitedSupportedSystems ? [ "i686-linux" ]
@@ -52,7 +52,8 @@ in rec {
         (all nixos.dummy)
         (all nixos.manual)
 
-        (all nixos.iso_minimal)
+        nixos.iso_minimal.x86_64-linux
+        nixos.iso_minimal.i686-linux
         nixos.iso_graphical.x86_64-linux
         nixos.ova.x86_64-linux
 
diff --git a/nixos/release-small.nix b/nixos/release-small.nix
index e9f3cfb4de53..2b532c70763f 100644
--- a/nixos/release-small.nix
+++ b/nixos/release-small.nix
@@ -2,7 +2,7 @@
 # small subset of Nixpkgs, mostly useful for servers that need fast
 # security updates.
 
-{ nixpkgs ? { outPath = ./..; revCount = 56789; shortRev = "gfedcba"; }
+{ nixpkgs ? { outPath = (import ../lib).cleanSource ./..; revCount = 56789; shortRev = "gfedcba"; }
 , stableBranch ? false
 , supportedSystems ? [ "x86_64-linux" ] # no i686-linux
 }:
@@ -41,6 +41,7 @@ in rec {
         nfs3
         openssh
         php-pcre
+        predictable-interface-names
         proxy
         simple;
       installer = {
diff --git a/nixos/release.nix b/nixos/release.nix
index a9c0aae7a526..c85150190587 100644
--- a/nixos/release.nix
+++ b/nixos/release.nix
@@ -1,4 +1,4 @@
-{ nixpkgs ? { outPath = ./..; revCount = 56789; shortRev = "gfedcba"; }
+{ nixpkgs ? { outPath = (import ../lib).cleanSource ./..; revCount = 56789; shortRev = "gfedcba"; }
 , stableBranch ? false
 , supportedSystems ? [ "x86_64-linux" "aarch64-linux" ]
 }:
@@ -35,8 +35,8 @@ let
 
 
   versionModule =
-    { system.nixosVersionSuffix = versionSuffix;
-      system.nixosRevision = nixpkgs.rev or nixpkgs.shortRev;
+    { system.nixos.versionSuffix = versionSuffix;
+      system.nixos.revision = nixpkgs.rev or nixpkgs.shortRev;
     };
 
 
@@ -244,6 +244,7 @@ in rec {
   tests.containers-macvlans = callTest tests/containers-macvlans.nix {};
   tests.couchdb = callTest tests/couchdb.nix {};
   tests.docker = callTestOnTheseSystems ["x86_64-linux"] tests/docker.nix {};
+  tests.docker-tools = callTestOnTheseSystems ["x86_64-linux"] tests/docker-tools.nix {};
   tests.docker-edge = callTestOnTheseSystems ["x86_64-linux"] tests/docker-edge.nix {};
   tests.dovecot = callTest tests/dovecot.nix {};
   tests.dnscrypt-proxy = callTestOnTheseSystems ["x86_64-linux"] tests/dnscrypt-proxy.nix {};
@@ -257,8 +258,10 @@ in rec {
   tests.firefox = callTest tests/firefox.nix {};
   tests.firewall = callTest tests/firewall.nix {};
   tests.fleet = callTestOnTheseSystems ["x86_64-linux"] tests/fleet.nix {};
+  #tests.fwupd = callTest tests/fwupd.nix {}; # build during evaluation
   #tests.gitlab = callTest tests/gitlab.nix {};
   tests.gitolite = callTest tests/gitolite.nix {};
+  tests.gjs = callTest tests/gjs.nix {};
   tests.gocd-agent = callTest tests/gocd-agent.nix {};
   tests.gocd-server = callTest tests/gocd-server.nix {};
   tests.gnome3 = callTest tests/gnome3.nix {};
@@ -276,6 +279,7 @@ in rec {
   tests.ipv6 = callTest tests/ipv6.nix {};
   tests.jenkins = callTest tests/jenkins.nix {};
   tests.plasma5 = callTest tests/plasma5.nix {};
+  tests.plotinus = callTest tests/plotinus.nix {};
   tests.keymap = callSubTests tests/keymap.nix {};
   tests.initrdNetwork = callTest tests/initrd-network.nix {};
   tests.kafka_0_9 = callTest tests/kafka_0_9.nix {};
@@ -314,6 +318,7 @@ in rec {
   tests.nfs4 = callTest tests/nfs.nix { version = 4; };
   tests.nginx = callTest tests/nginx.nix { };
   tests.nghttpx = callTest tests/nghttpx.nix { };
+  tests.novacomd = callTestOnTheseSystems ["x86_64-linux"] tests/novacomd.nix { };
   tests.leaps = callTest tests/leaps.nix { };
   tests.nsd = callTest tests/nsd.nix {};
   tests.openssh = callTest tests/openssh.nix {};
@@ -325,15 +330,20 @@ in rec {
   tests.postgresql = callSubTests tests/postgresql.nix {};
   tests.pgmanage = callTest tests/pgmanage.nix {};
   tests.postgis = callTest tests/postgis.nix {};
+  tests.powerdns = callTest tests/powerdns.nix {};
   #tests.pgjwt = callTest tests/pgjwt.nix {};
+  tests.predictable-interface-names = callSubTests tests/predictable-interface-names.nix {};
   tests.printing = callTest tests/printing.nix {};
   tests.prometheus = callTest tests/prometheus.nix {};
   tests.proxy = callTest tests/proxy.nix {};
   tests.pumpio = callTest tests/pump.io.nix {};
   # tests.quagga = callTest tests/quagga.nix {};
   tests.quake3 = callTest tests/quake3.nix {};
+  tests.rabbitmq = callTest tests/rabbitmq.nix {};
   tests.radicale = callTest tests/radicale.nix {};
+  tests.rspamd = callSubTests tests/rspamd.nix {};
   tests.runInMachine = callTest tests/run-in-machine.nix {};
+  tests.rxe = callTest tests/rxe.nix {};
   tests.samba = callTest tests/samba.nix {};
   tests.sddm = callSubTests tests/sddm.nix {};
   tests.simple = callTest tests/simple.nix {};
@@ -351,6 +361,7 @@ in rec {
   tests.wordpress = callTest tests/wordpress.nix {};
   tests.xfce = callTest tests/xfce.nix {};
   tests.xmonad = callTest tests/xmonad.nix {};
+  tests.yabar = callTest tests/yabar.nix {};
   tests.zookeeper = callTest tests/zookeeper.nix {};
 
   /* Build a bunch of typical closures so that Hydra can keep track of
diff --git a/nixos/tests/bittorrent.nix b/nixos/tests/bittorrent.nix
index 3a718a798315..50c98664660a 100644
--- a/nixos/tests/bittorrent.nix
+++ b/nixos/tests/bittorrent.nix
@@ -16,7 +16,7 @@ let
   miniupnpdConf = nodes: pkgs.writeText "miniupnpd.conf"
     ''
       ext_ifname=eth1
-      listening_ip=${(pkgs.lib.head nodes.router.config.networking.interfaces.eth2.ip4).address}/24
+      listening_ip=${(pkgs.lib.head nodes.router.config.networking.interfaces.eth2.ipv4.addresses).address}/24
       allow 1024-65535 192.168.2.0/24 1024-65535
     '';
 
@@ -56,7 +56,7 @@ in
         { environment.systemPackages = [ pkgs.transmission ];
           virtualisation.vlans = [ 2 ];
           networking.defaultGateway =
-            (pkgs.lib.head nodes.router.config.networking.interfaces.eth2.ip4).address;
+            (pkgs.lib.head nodes.router.config.networking.interfaces.eth2.ipv4.addresses).address;
           networking.firewall.enable = false;
         };
 
@@ -84,7 +84,7 @@ in
       # Create the torrent.
       $tracker->succeed("mkdir /tmp/data");
       $tracker->succeed("cp ${file} /tmp/data/test.tar.bz2");
-      $tracker->succeed("transmission-create /tmp/data/test.tar.bz2 -p -t http://${(pkgs.lib.head nodes.tracker.config.networking.interfaces.eth1.ip4).address}:6969/announce -o /tmp/test.torrent");
+      $tracker->succeed("transmission-create /tmp/data/test.tar.bz2 -p -t http://${(pkgs.lib.head nodes.tracker.config.networking.interfaces.eth1.ipv4.addresses).address}:6969/announce -o /tmp/test.torrent");
       $tracker->succeed("chmod 644 /tmp/test.torrent");
 
       # Start the tracker.  !!! use a less crappy tracker
diff --git a/nixos/tests/boot-stage1.nix b/nixos/tests/boot-stage1.nix
index eeaca9f50edc..b2e74bff6fcd 100644
--- a/nixos/tests/boot-stage1.nix
+++ b/nixos/tests/boot-stage1.nix
@@ -9,6 +9,7 @@ import ./make-test.nix ({ pkgs, ... }: {
         kver = config.boot.kernelPackages.kernel.modDirVersion;
         ksrc = "${kdev}/lib/modules/${kver}/build";
         hardeningDisable = [ "pic" ];
+        nativeBuildInputs = kdev.moduleBuildDependencies;
       } ''
         echo "obj-m += $name.o" > Makefile
         echo "$source" > "$name.c"
diff --git a/nixos/tests/cjdns.nix b/nixos/tests/cjdns.nix
index 466663799241..4d3b58abc6e5 100644
--- a/nixos/tests/cjdns.nix
+++ b/nixos/tests/cjdns.nix
@@ -12,7 +12,6 @@ let
       # the sequence of address assignment less stochastic.
       networking.useDHCP = false;
 
-      networking.interfaces.eth1.prefixLength = 24;
       # CJDNS output is incompatible with the XML log.
       systemd.services.cjdns.serviceConfig.StandardOutput = "null";
       #networking.firewall.enable = true;
@@ -49,7 +48,9 @@ import ./make-test.nix ({ pkgs, ...} : {
 
           { imports = [ basicConfig ];
 
-          networking.interfaces.eth1.ipAddress = "192.168.0.2";
+          networking.interfaces.eth1.ipv4.addresses = [
+            { address = "192.168.0.2"; prefixLength = 24; }
+          ];
 
           services.cjdns =
             { UDPInterface =
@@ -76,7 +77,9 @@ import ./make-test.nix ({ pkgs, ...} : {
             CJDNS_ADMIN_PASSWORD=FOOBAR
           '';
 
-          networking.interfaces.eth1.ipAddress = "192.168.0.1";
+          networking.interfaces.eth1.ipv4.addresses = [
+            { address = "192.168.0.1"; prefixLength = 24; }
+          ];
 
           services.cjdns =
             { authorizedPasswords = [ carolPassword ];
diff --git a/nixos/tests/containers-bridge.nix b/nixos/tests/containers-bridge.nix
index b8d4759684cc..dfef46a2ada4 100644
--- a/nixos/tests/containers-bridge.nix
+++ b/nixos/tests/containers-bridge.nix
@@ -26,8 +26,8 @@ import ./make-test.nix ({ pkgs, ...} : {
       };
       networking.interfaces = {
         br0 = {
-          ip4 = [{ address = hostIp; prefixLength = 24; }];
-          ip6 = [{ address = hostIp6; prefixLength = 7; }];
+          ipv4.addresses = [{ address = hostIp; prefixLength = 24; }];
+          ipv6.addresses = [{ address = hostIp6; prefixLength = 7; }];
         };
       };
 
diff --git a/nixos/tests/containers-extra_veth.nix b/nixos/tests/containers-extra_veth.nix
index 6339c8c558b9..df3f3354b2d9 100644
--- a/nixos/tests/containers-extra_veth.nix
+++ b/nixos/tests/containers-extra_veth.nix
@@ -21,11 +21,11 @@ import ./make-test.nix ({ pkgs, ...} : {
       };
       networking.interfaces = {
         br0 = {
-          ip4 = [{ address = "192.168.0.1"; prefixLength = 24; }];
-          ip6 = [{ address = "fc00::1"; prefixLength = 7; }];
+          ipv4.addresses = [{ address = "192.168.0.1"; prefixLength = 24; }];
+          ipv6.addresses = [{ address = "fc00::1"; prefixLength = 7; }];
         };
         br1 = {
-          ip4 = [{ address = "192.168.1.1"; prefixLength = 24; }];
+          ipv4.addresses = [{ address = "192.168.1.1"; prefixLength = 24; }];
         };
       };
 
diff --git a/nixos/tests/containers-hosts.nix b/nixos/tests/containers-hosts.nix
index c7a85f190a5d..df1ef6d14936 100644
--- a/nixos/tests/containers-hosts.nix
+++ b/nixos/tests/containers-hosts.nix
@@ -13,9 +13,9 @@ import ./make-test.nix ({ pkgs, ...} : {
       virtualisation.vlans = [];
 
       networking.bridges.br0.interfaces = [];
-      networking.interfaces.br0 = {
-        ip4 = [ { address = "10.11.0.254"; prefixLength = 24; } ];
-      };
+      networking.interfaces.br0.ipv4.addresses = [
+        { address = "10.11.0.254"; prefixLength = 24; }
+      ];
 
       # Force /etc/hosts to be the only source for host name resolution
       environment.etc."nsswitch.conf".text = lib.mkForce ''
diff --git a/nixos/tests/containers-macvlans.nix b/nixos/tests/containers-macvlans.nix
index 721f98481497..390dc4ad2c29 100644
--- a/nixos/tests/containers-macvlans.nix
+++ b/nixos/tests/containers-macvlans.nix
@@ -26,9 +26,9 @@ import ./make-test.nix ({ pkgs, ...} : {
           interface = "eth1";
           mode = "bridge";
         };
-        networking.interfaces.eth1.ip4 = lib.mkForce [];
+        networking.interfaces.eth1.ipv4.addresses = lib.mkForce [];
         networking.interfaces.mv-eth1-host = {
-          ip4 = [ { address = "192.168.1.1"; prefixLength = 24; } ];
+          ipv4.addresses = [ { address = "192.168.1.1"; prefixLength = 24; } ];
         };
 
         containers.test1 = {
@@ -37,7 +37,7 @@ import ./make-test.nix ({ pkgs, ...} : {
 
           config = {
             networking.interfaces.mv-eth1 = {
-              ip4 = [ { address = containerIp1; prefixLength = 24; } ];
+              ipv4.addresses = [ { address = containerIp1; prefixLength = 24; } ];
             };
           };
         };
@@ -48,7 +48,7 @@ import ./make-test.nix ({ pkgs, ...} : {
 
           config = {
             networking.interfaces.mv-eth1 = {
-              ip4 = [ { address = containerIp2; prefixLength = 24; } ];
+              ipv4.addresses = [ { address = containerIp2; prefixLength = 24; } ];
             };
           };
         };
diff --git a/nixos/tests/containers-physical_interfaces.nix b/nixos/tests/containers-physical_interfaces.nix
index a3b0b29951bf..bd1228b8e37d 100644
--- a/nixos/tests/containers-physical_interfaces.nix
+++ b/nixos/tests/containers-physical_interfaces.nix
@@ -16,9 +16,9 @@ import ./make-test.nix ({ pkgs, ...} : {
           interfaces = [ "eth1" ];
 
           config = {
-            networking.interfaces.eth1 = {
-              ip4 = [ { address = "10.10.0.1"; prefixLength = 24; } ];
-            };
+            networking.interfaces.eth1.ipv4.addresses = [
+              { address = "10.10.0.1"; prefixLength = 24; }
+            ];
             networking.firewall.enable = false;
           };
         };
@@ -33,9 +33,9 @@ import ./make-test.nix ({ pkgs, ...} : {
 
         config = {
           networking.bridges.br0.interfaces = [ "eth1" ];
-          networking.interfaces.br0 = {
-            ip4 = [ { address = "10.10.0.2"; prefixLength = 24; } ];
-          };
+          networking.interfaces.br0.ipv4.addresses = [
+            { address = "10.10.0.2"; prefixLength = 24; }
+          ];
           networking.firewall.enable = false;
         };
       };
@@ -54,9 +54,9 @@ import ./make-test.nix ({ pkgs, ...} : {
             interfaces = [ "eth1" ];
             mode = "active-backup";
           };
-          networking.interfaces.bond0 = {
-            ip4 = [ { address = "10.10.0.3"; prefixLength = 24; } ];
-          };
+          networking.interfaces.bond0.ipv4.addresses = [
+            { address = "10.10.0.3"; prefixLength = 24; }
+          ];
           networking.firewall.enable = false;
         };
       };
@@ -76,9 +76,9 @@ import ./make-test.nix ({ pkgs, ...} : {
             mode = "active-backup";
           };
           networking.bridges.br0.interfaces = [ "bond0" ];
-          networking.interfaces.br0 = {
-            ip4 = [ { address = "10.10.0.4"; prefixLength = 24; } ];
-          };
+          networking.interfaces.br0.ipv4.addresses = [
+            { address = "10.10.0.4"; prefixLength = 24; }
+          ];
           networking.firewall.enable = false;
         };
       };
diff --git a/nixos/tests/containers-reloadable.nix b/nixos/tests/containers-reloadable.nix
index b5867c6f6ab1..5fb42f2272b3 100644
--- a/nixos/tests/containers-reloadable.nix
+++ b/nixos/tests/containers-reloadable.nix
@@ -11,7 +11,7 @@ let
 
     # prevent make-test.nix to change IP
     networking.interfaces = {
-      eth1.ip4 = lib.mkOverride 0 [ ];
+      eth1.ipv4.addresses = lib.mkOverride 0 [ ];
     };
   };
 in {
diff --git a/nixos/tests/containers-restart_networking.nix b/nixos/tests/containers-restart_networking.nix
index 086d056c51cd..f68c9b07759b 100644
--- a/nixos/tests/containers-restart_networking.nix
+++ b/nixos/tests/containers-restart_networking.nix
@@ -11,7 +11,7 @@ let
       config = {
         networking.firewall.enable = false;
         networking.firewall.allowPing = true;
-        networking.interfaces.eth0.ip4 = [
+        networking.interfaces.eth0.ipv4.addresses = [
           { address = "192.168.1.122"; prefixLength = 24; }
         ];
       };
@@ -33,8 +33,8 @@ in import ./make-test.nix ({ pkgs, lib, ...} :
         rstp = false;
       };
       networking.interfaces = {
-        eth1.ip4 = lib.mkOverride 0 [ ];
-        br0.ip4 = [{ address = "192.168.1.1"; prefixLength = 24; }];
+        eth1.ipv4.addresses = lib.mkOverride 0 [ ];
+        br0.ipv4.addresses = [ { address = "192.168.1.1"; prefixLength = 24; } ];
       };
 
     };
@@ -44,8 +44,8 @@ in import ./make-test.nix ({ pkgs, lib, ...} :
         rstp = false;
       };
       networking.interfaces = {
-        eth1.ip4 = lib.mkOverride 0 [ ];
-        br0.ip4 = [{ address = "192.168.1.2"; prefixLength = 24; }];
+        eth1.ipv4.addresses = lib.mkOverride 0 [ ];
+        br0.ipv4.addresses = [ { address = "192.168.1.2"; prefixLength = 24; } ];
       };
     };
     client_eth1_rstp = { lib, pkgs, ... }: client_base // {
@@ -54,8 +54,8 @@ in import ./make-test.nix ({ pkgs, lib, ...} :
         rstp = true;
       };
       networking.interfaces = {
-        eth1.ip4 = lib.mkOverride 0 [ ];
-        br0.ip4 = [{ address = "192.168.1.2"; prefixLength = 24; }];
+        eth1.ipv4.addresses = lib.mkOverride 0 [ ];
+        br0.ipv4.addresses =  [ { address = "192.168.1.2"; prefixLength = 24; } ];
       };
     };
   };
diff --git a/nixos/tests/docker-tools.nix b/nixos/tests/docker-tools.nix
new file mode 100644
index 000000000000..e52a4c3f884e
--- /dev/null
+++ b/nixos/tests/docker-tools.nix
@@ -0,0 +1,39 @@
+# this test creates a simple GNU image with docker tools and sees if it executes
+
+import ./make-test.nix ({ pkgs, ... }: {
+  name = "docker-tools";
+  meta = with pkgs.stdenv.lib.maintainers; {
+    maintainers = [ ];
+  };
+
+  nodes = {
+    docker =
+      { config, pkgs, ... }: {
+        virtualisation = {
+          diskSize = 1024;
+          docker.enable = true;
+        };
+      };
+  };
+
+  testScript =
+    ''
+      $docker->waitForUnit("sockets.target");
+
+      $docker->succeed("docker load --input='${pkgs.dockerTools.examples.bash}'");
+      $docker->succeed("docker run ${pkgs.dockerTools.examples.bash.imageName} /bin/bash --version");
+
+      $docker->succeed("docker load --input='${pkgs.dockerTools.examples.nix}'");
+      $docker->succeed("docker run ${pkgs.dockerTools.examples.nix.imageName} /bin/nix-store -qR ${pkgs.nix}");
+
+      # To test the pullImage tool
+      $docker->succeed("docker load --input='${pkgs.dockerTools.examples.nixFromDockerHub}'");
+      $docker->succeed("docker run nixos/nix:1.11 nix-store --version");
+
+      # To test runAsRoot and entry point
+      $docker->succeed("docker load --input='${pkgs.dockerTools.examples.nginx}'");
+      $docker->succeed("docker run --name nginx -d -p 8000:80 ${pkgs.dockerTools.examples.nginx.imageName}");
+      $docker->waitUntilSucceeds('curl http://localhost:8000/');
+      $docker->succeed("docker rm --force nginx");
+    '';
+})
diff --git a/nixos/tests/ferm.nix b/nixos/tests/ferm.nix
index 8f2a8c01eebc..bb7daae118c0 100644
--- a/nixos/tests/ferm.nix
+++ b/nixos/tests/ferm.nix
@@ -11,8 +11,8 @@ import ./make-test.nix ({ pkgs, ...} : {
         with pkgs.lib;
         {
           networking = {
-            interfaces.eth1.ip6 = mkOverride 0 [ { address = "fd00::2"; prefixLength = 64; } ];
-            interfaces.eth1.ip4 = mkOverride 0 [ { address = "192.168.1.2"; prefixLength = 24; } ];
+            interfaces.eth1.ipv6.addresses = mkOverride 0 [ { address = "fd00::2"; prefixLength = 64; } ];
+            interfaces.eth1.ipv4.addresses = mkOverride 0 [ { address = "192.168.1.2"; prefixLength = 24; } ];
           };
       };
       server =
@@ -20,8 +20,8 @@ import ./make-test.nix ({ pkgs, ...} : {
         with pkgs.lib;
         {
           networking = {
-            interfaces.eth1.ip6 = mkOverride 0 [ { address = "fd00::1"; prefixLength = 64; } ];
-            interfaces.eth1.ip4 = mkOverride 0 [ { address = "192.168.1.1"; prefixLength = 24; } ];
+            interfaces.eth1.ipv6.addresses = mkOverride 0 [ { address = "fd00::1"; prefixLength = 64; } ];
+            interfaces.eth1.ipv4.addresses = mkOverride 0 [ { address = "192.168.1.1"; prefixLength = 24; } ];
           };
 
           services = {
diff --git a/nixos/tests/fwupd.nix b/nixos/tests/fwupd.nix
new file mode 100644
index 000000000000..bf4ef25130b3
--- /dev/null
+++ b/nixos/tests/fwupd.nix
@@ -0,0 +1,19 @@
+# run installed tests
+import ./make-test.nix ({ pkgs, ... }: {
+  name = "fwupd";
+
+  meta = {
+    maintainers = pkgs.fwupd.meta.maintainers;
+  };
+
+  machine = { config, pkgs, ... }: {
+    services.fwupd.enable = true;
+    environment.systemPackages = with pkgs; [ gnome-desktop-testing ];
+    environment.variables.XDG_DATA_DIRS = [ "${pkgs.fwupd.installedTests}/share" ];
+    virtualisation.memorySize = 768;
+  };
+
+  testScript = ''
+    $machine->succeed("gnome-desktop-testing-runner");
+  '';
+})
diff --git a/nixos/tests/gjs.nix b/nixos/tests/gjs.nix
new file mode 100644
index 000000000000..e6002ef98dd0
--- /dev/null
+++ b/nixos/tests/gjs.nix
@@ -0,0 +1,19 @@
+# run installed tests
+import ./make-test.nix ({ pkgs, ... }: {
+  name = "gjs";
+
+  meta = {
+    maintainers = pkgs.gnome3.gjs.meta.maintainers;
+  };
+
+  machine = { pkgs, ... }: {
+    imports = [ ./common/x11.nix ];
+    environment.systemPackages = with pkgs; [ gnome-desktop-testing ];
+    environment.variables.XDG_DATA_DIRS = [ "${pkgs.gnome3.gjs.installedTests}/share" ];
+  };
+
+  testScript = ''
+    $machine->waitForX;
+    $machine->succeed("gnome-desktop-testing-runner");
+  '';
+})
diff --git a/nixos/tests/home-assistant.nix b/nixos/tests/home-assistant.nix
index 5d7e0ec65e73..2e45dc78471f 100644
--- a/nixos/tests/home-assistant.nix
+++ b/nixos/tests/home-assistant.nix
@@ -2,17 +2,27 @@ import ./make-test.nix ({ pkgs, ... }:
 
 let
   configDir = "/var/lib/foobar";
+  apiPassword = "secret";
 
 in {
   name = "home-assistant";
+  meta = with pkgs.stdenv.lib; {
+    maintainers = with maintainers; [ dotlambda ];
+  };
 
   nodes = {
     hass =
       { config, pkgs, ... }:
       {
+        environment.systemPackages = with pkgs; [
+          mosquitto
+        ];
         services.home-assistant = {
           inherit configDir;
           enable = true;
+          package = pkgs.home-assistant.override {
+            extraPackages = ps: with ps; [ hbmqtt ];
+          };
           config = {
             homeassistant = {
               name = "Home";
@@ -22,7 +32,16 @@ in {
               elevation = 0;
             };
             frontend = { };
-            http = { };
+            http.api_password = apiPassword;
+            mqtt = { }; # Use hbmqtt as broker
+            binary_sensor = [
+              {
+                platform = "mqtt";
+                state_topic = "home-assistant/test";
+                payload_on = "let_there_be_light";
+                payload_off = "off";
+              }
+            ];
           };
         };
       };
@@ -31,7 +50,7 @@ in {
   testScript = ''
     startAll;
     $hass->waitForUnit("home-assistant.service");
-    
+
     # Since config is specified using a Nix attribute set,
     # configuration.yaml is a link to the Nix store
     $hass->succeed("test -L ${configDir}/configuration.yaml");
@@ -39,8 +58,19 @@ in {
     # Check that Home Assistant's web interface and API can be reached
     $hass->waitForOpenPort(8123);
     $hass->succeed("curl --fail http://localhost:8123/states");
-    $hass->succeed("curl --fail http://localhost:8123/api/ | grep 'API running'");
+    $hass->succeed("curl --fail -H 'x-ha-access: ${apiPassword}' http://localhost:8123/api/ | grep -qF 'API running'");
 
+    # Toggle a binary sensor using MQTT
+    $hass->succeed("curl http://localhost:8123/api/states/binary_sensor.mqtt_binary_sensor -H 'x-ha-access: ${apiPassword}' | grep -qF '\"state\": \"off\"'");
+    $hass->waitUntilSucceeds("mosquitto_pub -V mqttv311 -t home-assistant/test -u homeassistant -P '${apiPassword}' -m let_there_be_light");
+    $hass->succeed("curl http://localhost:8123/api/states/binary_sensor.mqtt_binary_sensor -H 'x-ha-access: ${apiPassword}' | grep -qF '\"state\": \"on\"'");
+
+    # Check that no errors were logged
     $hass->fail("cat ${configDir}/home-assistant.log | grep -qF ERROR");
+
+    # Print log to ease debugging
+    my $log = $hass->succeed("cat ${configDir}/home-assistant.log");
+    print "\n### home-assistant.log ###\n";
+    print "$log\n";
   '';
 })
diff --git a/nixos/tests/initrd-network-ssh/default.nix b/nixos/tests/initrd-network-ssh/default.nix
index 9d476cb1a967..b1f3d147e862 100644
--- a/nixos/tests/initrd-network-ssh/default.nix
+++ b/nixos/tests/initrd-network-ssh/default.nix
@@ -11,9 +11,7 @@ import ../make-test.nix ({ pkgs, lib, ... }:
       { config, pkgs, ... }:
       {
         boot.kernelParams = [
-          "ip=${
-            (head config.networking.interfaces.eth1.ip4).address
-          }:::255.255.255.0::eth1:none"
+          "ip=${config.networking.primaryIPAddress}:::255.255.255.0::eth1:none"
         ];
         boot.initrd.network = {
           enable = true;
diff --git a/nixos/tests/ipv6.nix b/nixos/tests/ipv6.nix
index 060f63216796..7a98fd85cfda 100644
--- a/nixos/tests/ipv6.nix
+++ b/nixos/tests/ipv6.nix
@@ -47,7 +47,7 @@ import ./make-test.nix ({ pkgs, ...} : {
       # Detection).
       sub waitForAddress {
           my ($machine, $iface, $scope) = @_;
-          $machine->waitUntilSucceeds("[ `ip -o -6 addr show dev $iface scope $scope | grep -v tentative | wc -l` -eq 1 ]");
+          $machine->waitUntilSucceeds("[ `ip -o -6 addr show dev $iface scope $scope | grep -v tentative | wc -l` -ge 1 ]");
           my $ip = (split /[ \/]+/, $machine->succeed("ip -o -6 addr show dev $iface scope $scope"))[3];
           $machine->log("$scope address on $iface is $ip");
           return $ip;
diff --git a/nixos/tests/kubernetes/base.nix b/nixos/tests/kubernetes/base.nix
index f3b930b630ba..27b99aacab7d 100644
--- a/nixos/tests/kubernetes/base.nix
+++ b/nixos/tests/kubernetes/base.nix
@@ -7,7 +7,7 @@ let
   mkKubernetesBaseTest =
     { name, domain ? "my.zyx", test, machines
     , pkgs ? import <nixpkgs> { inherit system; }
-    , certs ? import ./certs.nix { inherit pkgs; externalDomain = domain; }
+    , certs ? import ./certs.nix { inherit pkgs; externalDomain = domain; kubelets = attrNames machines; }
     , extraConfiguration ? null }:
     let
       masterName = head (filter (machineName: any (role: role == "master") machines.${machineName}.roles) (attrNames machines));
diff --git a/nixos/tests/kubernetes/certs.nix b/nixos/tests/kubernetes/certs.nix
index f108e35b98cd..d3eff910c467 100644
--- a/nixos/tests/kubernetes/certs.nix
+++ b/nixos/tests/kubernetes/certs.nix
@@ -2,7 +2,8 @@
   pkgs ? import <nixpkgs> {},
   internalDomain ? "cloud.yourdomain.net",
   externalDomain ? "myawesomecluster.cluster.yourdomain.net",
-  serviceClusterIp ? "10.0.0.1"
+  serviceClusterIp ? "10.0.0.1",
+  kubelets
 }:
 let
   runWithCFSSL = name: cmd:
@@ -123,9 +124,10 @@ let
   };
 
   apiserver-client = {
-    kubelet = createClientCertKey {
+    kubelet = hostname: createClientCertKey {
       inherit ca;
-      cn = "apiserver-client-kubelet";
+      name = "apiserver-client-kubelet-${hostname}";
+      cn = "system:node:${hostname}.${externalDomain}";
       groups = ["system:nodes"];
     };
 
@@ -175,10 +177,9 @@ in {
     paths = [
       (writeCFSSL (noKey ca))
       (writeCFSSL kubelet)
-      (writeCFSSL apiserver-client.kubelet)
       (writeCFSSL apiserver-client.kube-proxy)
       (writeCFSSL etcd-client)
-    ];
+    ] ++ map (hostname: writeCFSSL (apiserver-client.kubelet hostname)) kubelets;
   };
 
   admin = writeCFSSL apiserver-client.admin;
diff --git a/nixos/tests/kubernetes/dns.nix b/nixos/tests/kubernetes/dns.nix
index 74d98dabec8d..8c488d271bcd 100644
--- a/nixos/tests/kubernetes/dns.nix
+++ b/nixos/tests/kubernetes/dns.nix
@@ -3,7 +3,7 @@ with import ./base.nix { inherit system; };
 let
   domain = "my.zyx";
 
-  certs = import ./certs.nix { externalDomain = domain; };
+  certs = import ./certs.nix { externalDomain = domain; kubelets = [ "machine1" "machine2" ]; };
 
   redisPod = pkgs.writeText "redis-pod.json" (builtins.toJSON {
     kind = "Pod";
diff --git a/nixos/tests/kubernetes/kubernetes-common.nix b/nixos/tests/kubernetes/kubernetes-common.nix
index 00a5c9aba4e3..ddf427e1b01a 100644
--- a/nixos/tests/kubernetes/kubernetes-common.nix
+++ b/nixos/tests/kubernetes/kubernetes-common.nix
@@ -29,8 +29,8 @@ let
       tlsKeyFile = "${certs.worker}/kubelet-key.pem";
       hostname = "${config.networking.hostName}.${config.networking.domain}";
       kubeconfig = {
-        certFile = "${certs.worker}/apiserver-client-kubelet.pem";
-        keyFile = "${certs.worker}/apiserver-client-kubelet-key.pem";
+        certFile = "${certs.worker}/apiserver-client-kubelet-${config.networking.hostName}.pem";
+        keyFile = "${certs.worker}/apiserver-client-kubelet-${config.networking.hostName}-key.pem";
       };
     };
     controllerManager = {
diff --git a/nixos/tests/nat.nix b/nixos/tests/nat.nix
index a12b7645bc28..7057158a829b 100644
--- a/nixos/tests/nat.nix
+++ b/nixos/tests/nat.nix
@@ -35,7 +35,7 @@ import ./make-test.nix ({ pkgs, lib, withFirewall, withConntrackHelpers ? false,
             { virtualisation.vlans = [ 1 ];
               networking.firewall.allowPing = true;
               networking.defaultGateway =
-                (pkgs.lib.head nodes.router.config.networking.interfaces.eth2.ip4).address;
+                (pkgs.lib.head nodes.router.config.networking.interfaces.eth2.ipv4.addresses).address;
             }
             (lib.optionalAttrs withConntrackHelpers {
               networking.firewall.connectionTrackingModules = [ "ftp" ];
diff --git a/nixos/tests/networking.nix b/nixos/tests/networking.nix
index 182328b32962..5cb40af5799e 100644
--- a/nixos/tests/networking.nix
+++ b/nixos/tests/networking.nix
@@ -21,10 +21,8 @@ let
         firewall.allowedUDPPorts = [ 547 ];
         interfaces = mkOverride 0 (listToAttrs (flip map vlanIfs (n:
           nameValuePair "eth${toString n}" {
-            ipAddress = "192.168.${toString n}.1";
-            prefixLength = 24;
-            ipv6Address = "fd00:1234:5678:${toString n}::1";
-            ipv6PrefixLength = 64;
+            ipv4.addresses = [ { address = "192.168.${toString n}.1"; prefixLength = 24; } ];
+            ipv6.addresses = [ { address = "fd00:1234:5678:${toString n}::1"; prefixLength = 64; } ];
           })));
       };
       services.dhcpd4 = {
@@ -90,12 +88,12 @@ let
           firewall.allowPing = true;
           useDHCP = false;
           defaultGateway = "192.168.1.1";
-          interfaces.eth1.ip4 = mkOverride 0 [
+          interfaces.eth1.ipv4.addresses = mkOverride 0 [
             { address = "192.168.1.2"; prefixLength = 24; }
             { address = "192.168.1.3"; prefixLength = 32; }
             { address = "192.168.1.10"; prefixLength = 32; }
           ];
-          interfaces.eth2.ip4 = mkOverride 0 [
+          interfaces.eth2.ipv4.addresses = mkOverride 0 [
             { address = "192.168.2.2"; prefixLength = 24; }
           ];
         };
@@ -143,12 +141,12 @@ let
           firewall.allowPing = true;
           useDHCP = true;
           interfaces.eth1 = {
-            ip4 = mkOverride 0 [ ];
-            ip6 = mkOverride 0 [ ];
+            ipv4.addresses = mkOverride 0 [ ];
+            ipv6.addresses = mkOverride 0 [ ];
           };
           interfaces.eth2 = {
-            ip4 = mkOverride 0 [ ];
-            ip6 = mkOverride 0 [ ];
+            ipv4.addresses = mkOverride 0 [ ];
+            ipv6.addresses = mkOverride 0 [ ];
           };
         };
       };
@@ -198,10 +196,10 @@ let
           firewall.allowPing = true;
           useDHCP = false;
           interfaces.eth1 = {
-            ip4 = mkOverride 0 [ ];
+            ipv4.addresses = mkOverride 0 [ ];
             useDHCP = true;
           };
-          interfaces.eth2.ip4 = mkOverride 0 [ ];
+          interfaces.eth2.ipv4.addresses = mkOverride 0 [ ];
         };
       };
       testScript = { nodes, ... }:
@@ -241,9 +239,9 @@ let
             interfaces = [ "eth1" "eth2" ];
             driverOptions.mode = "balance-rr";
           };
-          interfaces.eth1.ip4 = mkOverride 0 [ ];
-          interfaces.eth2.ip4 = mkOverride 0 [ ];
-          interfaces.bond.ip4 = mkOverride 0
+          interfaces.eth1.ipv4.addresses = mkOverride 0 [ ];
+          interfaces.eth2.ipv4.addresses = mkOverride 0 [ ];
+          interfaces.bond.ipv4.addresses = mkOverride 0
             [ { inherit address; prefixLength = 30; } ];
         };
       };
@@ -274,7 +272,7 @@ let
           useNetworkd = networkd;
           firewall.allowPing = true;
           useDHCP = false;
-          interfaces.eth1.ip4 = mkOverride 0
+          interfaces.eth1.ipv4.addresses = mkOverride 0
             [ { inherit address; prefixLength = 24; } ];
         };
       };
@@ -289,9 +287,9 @@ let
           firewall.allowPing = true;
           useDHCP = false;
           bridges.bridge.interfaces = [ "eth1" "eth2" ];
-          interfaces.eth1.ip4 = mkOverride 0 [ ];
-          interfaces.eth2.ip4 = mkOverride 0 [ ];
-          interfaces.bridge.ip4 = mkOverride 0
+          interfaces.eth1.ipv4.addresses = mkOverride 0 [ ];
+          interfaces.eth2.ipv4.addresses = mkOverride 0 [ ];
+          interfaces.bridge.ipv4.addresses = mkOverride 0
             [ { address = "192.168.1.1"; prefixLength = 24; } ];
         };
       };
@@ -328,7 +326,7 @@ let
           firewall.allowPing = true;
           useDHCP = true;
           macvlans.macvlan.interface = "eth1";
-          interfaces.eth1.ip4 = mkOverride 0 [ ];
+          interfaces.eth1.ipv4.addresses = mkOverride 0 [ ];
         };
       };
       testScript = { nodes, ... }:
@@ -369,9 +367,9 @@ let
             local = address4;
             dev = "eth1";
           };
-          interfaces.eth1.ip4 = mkOverride 0
+          interfaces.eth1.ipv4.addresses = mkOverride 0
             [ { address = address4; prefixLength = 24; } ];
-          interfaces.sit.ip6 = mkOverride 0
+          interfaces.sit.ipv6.addresses = mkOverride 0
             [ { address = address6; prefixLength = 64; } ];
         };
       };
@@ -410,9 +408,9 @@ let
             id = 1;
             interface = "eth0";
           };
-          interfaces.eth0.ip4 = mkOverride 0 [ ];
-          interfaces.eth1.ip4 = mkOverride 0 [ ];
-          interfaces.vlan.ip4 = mkOverride 0
+          interfaces.eth0.ipv4.addresses = mkOverride 0 [ ];
+          interfaces.eth1.ipv4.addresses = mkOverride 0 [ ];
+          interfaces.vlan.ipv4.addresses = mkOverride 0
             [ { inherit address; prefixLength = 24; } ];
         };
       };
@@ -437,13 +435,13 @@ let
       name = "Virtual";
       machine = {
         networking.interfaces."tap0" = {
-          ip4 = [ { address = "192.168.1.1"; prefixLength = 24; } ];
-          ip6 = [ { address = "2001:1470:fffd:2096::"; prefixLength = 64; } ];
+          ipv4.addresses = [ { address = "192.168.1.1"; prefixLength = 24; } ];
+          ipv6.addresses = [ { address = "2001:1470:fffd:2096::"; prefixLength = 64; } ];
           virtual = true;
         };
         networking.interfaces."tun0" = {
-          ip4 = [ { address = "192.168.1.2"; prefixLength = 24; } ];
-          ip6 = [ { address = "2001:1470:fffd:2097::"; prefixLength = 64; } ];
+          ipv4.addresses = [ { address = "192.168.1.2"; prefixLength = 24; } ];
+          ipv6.addresses = [ { address = "2001:1470:fffd:2097::"; prefixLength = 64; } ];
           virtual = true;
         };
       };
@@ -476,6 +474,126 @@ let
         );
       '';
     };
+    privacy = {
+      name = "Privacy";
+      nodes.router = { config, pkgs, ... }: {
+        virtualisation.vlans = [ 1 ];
+        boot.kernel.sysctl."net.ipv6.conf.all.forwarding" = true;
+        networking = {
+          useNetworkd = networkd;
+          interfaces.eth1.ipv6.addresses = singleton {
+            address = "fd00:1234:5678:1::1";
+            prefixLength = 64;
+          };
+        };
+        services.radvd = {
+          enable = true;
+          config = ''
+            interface eth1 {
+              AdvSendAdvert on;
+              AdvManagedFlag on;
+              AdvOtherConfigFlag on;
+
+              prefix fd00:1234:5678:1::/64 {
+                AdvAutonomous on;
+                AdvOnLink on;
+              };
+            };
+          '';
+        };
+      };
+      nodes.client = { config, pkgs, ... }: with pkgs.lib; {
+        virtualisation.vlans = [ 1 ];
+        networking = {
+          useNetworkd = networkd;
+          useDHCP = true;
+          interfaces.eth1 = {
+            preferTempAddress = true;
+            ipv4.addresses = mkOverride 0 [ ];
+            ipv6.addresses = mkOverride 0 [ ];
+          };
+        };
+      };
+      testScript = { nodes, ... }:
+        ''
+          startAll;
+
+          $client->waitForUnit("network.target");
+          $router->waitForUnit("network-online.target");
+
+          # Wait until we have an ip address
+          $client->waitUntilSucceeds("ip addr show dev eth1 | grep -q 'fd00:1234:5678:1:'");
+
+          # Test vlan 1
+          $client->waitUntilSucceeds("ping -c 1 fd00:1234:5678:1::1");
+
+          # Test address used is temporary
+          $client->waitUntilSucceeds("! ip route get fd00:1234:5678:1::1 | grep -q ':[a-f0-9]*ff:fe[a-f0-9]*:'");
+        '';
+    };
+    routes = {
+      name = "routes";
+      machine = {
+        networking.useDHCP = false;
+        networking.interfaces."eth0" = {
+          ipv4.addresses = [ { address = "192.168.1.2"; prefixLength = 24; } ];
+          ipv6.addresses = [ { address = "2001:1470:fffd:2097::"; prefixLength = 64; } ];
+          ipv6.routes = [
+            { address = "fdfd:b3f0::"; prefixLength = 48; }
+            { address = "2001:1470:fffd:2098::"; prefixLength = 64; via = "fdfd:b3f0::1"; }
+          ];
+          ipv4.routes = [
+            { address = "10.0.0.0"; prefixLength = 16; options = { mtu = "1500"; }; }
+            { address = "192.168.2.0"; prefixLength = 24; via = "192.168.1.1"; }
+          ];
+        };
+        virtualisation.vlans = [ ];
+      };
+
+      testScript = ''
+        my $targetIPv4Table = <<'END';
+        10.0.0.0/16 scope link mtu 1500 
+        192.168.1.0/24 proto kernel scope link src 192.168.1.2 
+        192.168.2.0/24 via 192.168.1.1 
+        END
+
+        my $targetIPv6Table = <<'END';
+        2001:1470:fffd:2097::/64 proto kernel metric 256 pref medium
+        2001:1470:fffd:2098::/64 via fdfd:b3f0::1 metric 1024 pref medium
+        fdfd:b3f0::/48 metric 1024 pref medium
+        END
+
+        $machine->start;
+        $machine->waitForUnit("network.target");
+
+        # test routing tables
+        my $ipv4Table = $machine->succeed("ip -4 route list dev eth0 | head -n3");
+        my $ipv6Table = $machine->succeed("ip -6 route list dev eth0 | head -n3");
+        "$ipv4Table" eq "$targetIPv4Table" or die(
+          "The IPv4 routing table does not match the expected one:\n",
+          "Result:\n", "$ipv4Table\n",
+          "Expected:\n", "$targetIPv4Table\n"
+        );
+        "$ipv6Table" eq "$targetIPv6Table" or die(
+          "The IPv6 routing table does not match the expected one:\n",
+          "Result:\n", "$ipv6Table\n",
+          "Expected:\n", "$targetIPv6Table\n"
+        );
+
+        # test clean-up of the tables
+        $machine->succeed("systemctl stop network-addresses-eth0");
+        my $ipv4Residue = $machine->succeed("ip -4 route list dev eth0 | head -n-3");
+        my $ipv6Residue = $machine->succeed("ip -6 route list dev eth0 | head -n-3");
+        $ipv4Residue eq "" or die(
+          "The IPv4 routing table has not been properly cleaned:\n",
+          "$ipv4Residue\n"
+        );
+        $ipv6Residue eq "" or die(
+          "The IPv6 routing table has not been properly cleaned:\n",
+          "$ipv6Residue\n"
+        );
+      '';
+    };
   };
 
 in mapAttrs (const (attrs: makeTest (attrs // {
diff --git a/nixos/tests/novacomd.nix b/nixos/tests/novacomd.nix
new file mode 100644
index 000000000000..21b86f6dae27
--- /dev/null
+++ b/nixos/tests/novacomd.nix
@@ -0,0 +1,28 @@
+import ./make-test.nix ({ pkgs, ...} : {
+  name = "novacomd";
+  meta = with pkgs.stdenv.lib.maintainers; {
+    maintainers = [ dtzWill ];
+  };
+
+  machine = { config, pkgs, ... }: {
+    services.novacomd.enable = true;
+  };
+
+  testScript = ''
+    startAll;
+
+    $machine->waitForUnit("novacomd.service");
+
+    # Check status and try connecting with novacom
+    $machine->succeed("systemctl status novacomd.service >&2");
+    $machine->succeed("novacom -l");
+
+    # Stop the daemon, double-check novacom fails if daemon isn't working
+    $machine->stopJob("novacomd");
+    $machine->fail("novacom -l");
+
+    # And back again for good measure
+    $machine->startJob("novacomd");
+    $machine->succeed("novacom -l");
+  '';
+})
diff --git a/nixos/tests/nsd.nix b/nixos/tests/nsd.nix
index 0b1082056f6f..ad4d4f822435 100644
--- a/nixos/tests/nsd.nix
+++ b/nixos/tests/nsd.nix
@@ -15,25 +15,31 @@ in import ./make-test.nix ({ pkgs, ...} : {
     clientv4 = { lib, nodes, ... }: {
       imports = [ common ];
       networking.nameservers = lib.mkForce [
-        nodes.server.config.networking.interfaces.eth1.ipAddress
+        (lib.head nodes.server.config.networking.interfaces.eth1.ipv4.addresses).address
+      ];
+      networking.interfaces.eth1.ipv4.addresses = [
+        { address = "192.168.0.2"; prefixLength = 24; }
       ];
-      networking.interfaces.eth1.ipAddress = "192.168.0.2";
-      networking.interfaces.eth1.prefixLength = 24;
     };
 
     clientv6 = { lib, nodes, ... }: {
       imports = [ common ];
       networking.nameservers = lib.mkForce [
-        nodes.server.config.networking.interfaces.eth1.ipv6Address
+        (lib.head nodes.server.config.networking.interfaces.eth1.ipv6.addresses).address
+      ];
+      networking.interfaces.eth1.ipv4.addresses = [
+        { address = "dead:beef::2"; prefixLength = 24; }
       ];
-      networking.interfaces.eth1.ipv6Address = "dead:beef::2";
     };
 
     server = { lib, ... }: {
       imports = [ common ];
-      networking.interfaces.eth1.ipAddress = "192.168.0.1";
-      networking.interfaces.eth1.prefixLength = 24;
-      networking.interfaces.eth1.ipv6Address = "dead:beef::1";
+      networking.interfaces.eth1.ipv4.addresses = [
+        { address = "192.168.0.1"; prefixLength = 24; }
+      ];
+      networking.interfaces.eth1.ipv6.addresses = [
+        { address = "dead:beef::1"; prefixLength = 64; }
+      ];
       services.nsd.enable = true;
       services.nsd.interfaces = lib.mkForce [];
       services.nsd.zones."example.com.".data = ''
diff --git a/nixos/tests/plotinus.nix b/nixos/tests/plotinus.nix
new file mode 100644
index 000000000000..557d65f7960a
--- /dev/null
+++ b/nixos/tests/plotinus.nix
@@ -0,0 +1,27 @@
+import ./make-test.nix ({ pkgs, ... }: {
+  name = "plotinus";
+  meta = {
+    maintainers = pkgs.plotinus.meta.maintainers;
+  };
+
+  machine =
+    { config, pkgs, ... }:
+
+    { imports = [ ./common/x11.nix ];
+      programs.plotinus.enable = true;
+      environment.systemPackages = [ pkgs.gnome3.gnome-calculator pkgs.xdotool ];
+    };
+
+  testScript =
+    ''
+      $machine->waitForX;
+      $machine->execute("xterm -e 'gnome-calculator' &");
+      $machine->waitForWindow(qr/Calculator/);
+      $machine->execute("xdotool key ctrl+shift+p");
+      $machine->sleep(1); # wait for the popup
+      $machine->execute("xdotool key p r e f e r e n c e s Return");
+      $machine->waitForWindow(qr/Preferences/);
+      $machine->screenshot("screen");
+    '';
+
+})
diff --git a/nixos/tests/powerdns.nix b/nixos/tests/powerdns.nix
new file mode 100644
index 000000000000..0d5b0f715f52
--- /dev/null
+++ b/nixos/tests/powerdns.nix
@@ -0,0 +1,12 @@
+import ./make-test.nix ({ pkgs, ... }: {
+  name = "powerdns";
+
+  nodes.server = { config, pkgs, ... }: {
+    services.powerdns.enable = true;
+  };
+
+  testScript = ''
+    $server->waitForUnit("pdns");
+    $server->succeed("${pkgs.dnsutils}/bin/dig version.bind txt chaos \@127.0.0.1");
+  '';
+})
diff --git a/nixos/tests/predictable-interface-names.nix b/nixos/tests/predictable-interface-names.nix
new file mode 100644
index 000000000000..b4c2039923cf
--- /dev/null
+++ b/nixos/tests/predictable-interface-names.nix
@@ -0,0 +1,27 @@
+{ system ? builtins.currentSystem
+, pkgs ? import ../.. { inherit system; }
+}:
+with import ../lib/testing.nix { inherit system; };
+let boolToString = x: if x then "yes" else "no"; in
+let testWhenSetTo = predictable: withNetworkd:
+makeTest {
+  name = "${if predictable then "" else "un"}predictableInterfaceNames${if withNetworkd then "-with-networkd" else ""}";
+  meta = {};
+
+  machine = { config, pkgs, ... }: {
+    networking.usePredictableInterfaceNames = pkgs.stdenv.lib.mkForce predictable;
+    networking.useNetworkd = withNetworkd;
+    networking.dhcpcd.enable = !withNetworkd;
+  };
+
+  testScript = ''
+    print $machine->succeed("ip link");
+    $machine->succeed("ip link show ${if predictable then "ens3" else "eth0"}");
+    $machine->fail("ip link show ${if predictable then "eth0" else "ens3"}");
+  '';
+}; in
+with pkgs.stdenv.lib.lists;
+with pkgs.stdenv.lib.attrsets;
+listToAttrs (map (drv: nameValuePair drv.name drv) (
+crossLists testWhenSetTo [[true false] [true false]]
+))
diff --git a/nixos/tests/quagga.nix b/nixos/tests/quagga.nix
index b9644b4768c0..613180942c41 100644
--- a/nixos/tests/quagga.nix
+++ b/nixos/tests/quagga.nix
@@ -8,7 +8,7 @@
 import ./make-test.nix ({ pkgs, ... }:
   let
 
-    ifAddr = node: iface: (pkgs.lib.head node.config.networking.interfaces.${iface}.ip4).address;
+    ifAddr = node: iface: (pkgs.lib.head node.config.networking.interfaces.${iface}.ipv4.addresses).address;
 
     ospfConf = ''
       interface eth2
diff --git a/nixos/tests/rspamd.nix b/nixos/tests/rspamd.nix
new file mode 100644
index 000000000000..6b2e2dd3a531
--- /dev/null
+++ b/nixos/tests/rspamd.nix
@@ -0,0 +1,140 @@
+{ system ? builtins.currentSystem }:
+with import ../lib/testing.nix { inherit system; };
+with pkgs.lib;
+let
+  initMachine = ''
+    startAll
+    $machine->waitForUnit("rspamd.service");
+    $machine->succeed("id \"rspamd\" >/dev/null");
+  '';
+  checkSocket = socket: user: group: mode: ''
+    $machine->succeed("ls ${socket} >/dev/null");
+    $machine->succeed("[[ \"\$(stat -c %U ${socket})\" == \"${user}\" ]]");
+    $machine->succeed("[[ \"\$(stat -c %G ${socket})\" == \"${group}\" ]]");
+    $machine->succeed("[[ \"\$(stat -c %a ${socket})\" == \"${mode}\" ]]");
+  '';
+  simple = name: socketActivation: enableIPv6: makeTest {
+    name = "rspamd-${name}";
+    machine = {
+      services.rspamd = {
+        enable = true;
+        socketActivation = socketActivation;
+      };
+      networking.enableIPv6 = enableIPv6;
+    };
+    testScript = ''
+      startAll
+      $machine->waitForUnit("multi-user.target");
+      $machine->waitForOpenPort(11334);
+      $machine->waitForUnit("rspamd.service");
+      $machine->succeed("id \"rspamd\" >/dev/null");
+      ${checkSocket "/run/rspamd/rspamd.sock" "rspamd" "rspamd" "660" }
+      sleep 10;
+      $machine->log($machine->succeed("cat /etc/rspamd.conf"));
+      $machine->log($machine->succeed("systemctl cat rspamd.service"));
+      ${if socketActivation then ''
+        $machine->log($machine->succeed("systemctl cat rspamd-controller-1.socket"));
+        $machine->log($machine->succeed("systemctl cat rspamd-normal-1.socket"));
+      '' else ''
+        $machine->fail("systemctl cat rspamd-controller-1.socket");
+        $machine->fail("systemctl cat rspamd-normal-1.socket");
+      ''}
+      $machine->log($machine->succeed("curl http://localhost:11334/auth"));
+      $machine->log($machine->succeed("curl http://127.0.0.1:11334/auth"));
+      ${optionalString enableIPv6 ''
+        $machine->log($machine->succeed("curl http://[::1]:11334/auth"));
+      ''}
+    '';
+  };
+in
+{
+  simple = simple "simple" false true;
+  ipv4only = simple "ipv4only" false false;
+  simple-socketActivated = simple "simple-socketActivated" true true;
+  ipv4only-socketActivated = simple "ipv4only-socketActivated" true false;
+  deprecated = makeTest {
+    name = "rspamd-deprecated";
+    machine = {
+      services.rspamd = {
+        enable = true;
+        bindSocket = [ "/run/rspamd.sock mode=0600 user=root group=root" ];
+        bindUISocket = [ "/run/rspamd-worker.sock mode=0666 user=root group=root" ];
+      };
+    };
+
+    testScript = ''
+      ${initMachine}
+      $machine->waitForFile("/run/rspamd.sock");
+      ${checkSocket "/run/rspamd.sock" "root" "root" "600" }
+      ${checkSocket "/run/rspamd-worker.sock" "root" "root" "666" }
+      $machine->log($machine->succeed("cat /etc/rspamd.conf"));
+      $machine->fail("systemctl cat rspamd-normal-1.socket");
+      $machine->log($machine->succeed("rspamc -h /run/rspamd-worker.sock stat"));
+      $machine->log($machine->succeed("curl --unix-socket /run/rspamd-worker.sock http://localhost/ping"));
+    '';
+  };
+
+  bindports = makeTest {
+    name = "rspamd-bindports";
+    machine = {
+      services.rspamd = {
+        enable = true;
+        socketActivation = false;
+        workers.normal.bindSockets = [{
+          socket = "/run/rspamd.sock";
+          mode = "0600";
+          owner = "root";
+          group = "root";
+        }];
+        workers.controller.bindSockets = [{
+          socket = "/run/rspamd-worker.sock";
+          mode = "0666";
+          owner = "root";
+          group = "root";
+        }];
+      };
+    };
+
+    testScript = ''
+      ${initMachine}
+      $machine->waitForFile("/run/rspamd.sock");
+      ${checkSocket "/run/rspamd.sock" "root" "root" "600" }
+      ${checkSocket "/run/rspamd-worker.sock" "root" "root" "666" }
+      $machine->log($machine->succeed("cat /etc/rspamd.conf"));
+      $machine->fail("systemctl cat rspamd-normal-1.socket");
+      $machine->log($machine->succeed("rspamc -h /run/rspamd-worker.sock stat"));
+      $machine->log($machine->succeed("curl --unix-socket /run/rspamd-worker.sock http://localhost/ping"));
+    '';
+  };
+  socketActivated = makeTest {
+    name = "rspamd-socketActivated";
+    machine = {
+      services.rspamd = {
+        enable = true;
+        workers.normal.bindSockets = [{
+          socket = "/run/rspamd.sock";
+          mode = "0600";
+          owner = "root";
+          group = "root";
+        }];
+        workers.controller.bindSockets = [{
+          socket = "/run/rspamd-worker.sock";
+          mode = "0666";
+          owner = "root";
+          group = "root";
+        }];
+      };
+    };
+
+    testScript = ''
+      startAll
+      $machine->waitForFile("/run/rspamd.sock");
+      ${checkSocket "/run/rspamd.sock" "root" "root" "600" }
+      ${checkSocket "/run/rspamd-worker.sock" "root" "root" "666" }
+      $machine->log($machine->succeed("cat /etc/rspamd.conf"));
+      $machine->log($machine->succeed("systemctl cat rspamd-normal-1.socket"));
+      $machine->log($machine->succeed("rspamc -h /run/rspamd-worker.sock stat"));
+      $machine->log($machine->succeed("curl --unix-socket /run/rspamd-worker.sock http://localhost/ping"));
+    '';
+  };
+}
diff --git a/nixos/tests/rxe.nix b/nixos/tests/rxe.nix
new file mode 100644
index 000000000000..cfe64a75a635
--- /dev/null
+++ b/nixos/tests/rxe.nix
@@ -0,0 +1,53 @@
+import ./make-test.nix ({ pkgs, ... } :
+
+let
+  node = { config, pkgs, lib, ... } : {
+    networking = {
+      firewall = {
+        allowedUDPPorts = [ 4791 ]; # open RoCE port
+        allowedTCPPorts = [ 4800 ]; # port for test utils
+      };
+      rxe = {
+        enable = true;
+        interfaces = [ "eth1" ];
+      };
+    };
+
+    environment.systemPackages = with pkgs; [ rdma-core screen ];
+  };
+
+in {
+  name = "rxe";
+
+  nodes = {
+    server = node;
+    client = node;
+  };
+
+  testScript = ''
+    # Test if rxe interface comes up
+    $server->waitForUnit("default.target");
+    $server->succeed("systemctl status rxe.service");
+    $server->succeed("ibv_devices | grep rxe0");
+
+    $client->waitForUnit("default.target");
+
+    # ping pong test
+    $server->succeed("screen -dmS rc_pingpong ibv_rc_pingpong -p 4800 -g0");
+    $client->succeed("sleep 2; ibv_rc_pingpong -p 4800 -g0 server");
+
+    $server->succeed("screen -dmS uc_pingpong ibv_uc_pingpong -p 4800 -g0");
+    $client->succeed("sleep 2; ibv_uc_pingpong -p 4800 -g0 server");
+
+    $server->succeed("screen -dmS ud_pingpong ibv_ud_pingpong -p 4800 -s 1024 -g0");
+    $client->succeed("sleep 2; ibv_ud_pingpong -p 4800 -s 1024 -g0 server");
+
+    $server->succeed("screen -dmS srq_pingpong ibv_srq_pingpong -p 4800 -g0");
+    $client->succeed("sleep 2; ibv_srq_pingpong -p 4800 -g0 server");
+
+    $server->succeed("screen -dmS rping rping -s -a server -C 10");
+    $client->succeed("sleep 2; rping -c -a server -C 10");
+  '';
+})
+
+
diff --git a/nixos/tests/yabar.nix b/nixos/tests/yabar.nix
new file mode 100644
index 000000000000..40ca91e8064d
--- /dev/null
+++ b/nixos/tests/yabar.nix
@@ -0,0 +1,25 @@
+import ./make-test.nix ({ pkgs, lib }:
+
+with lib;
+
+{
+  name = "yabar";
+  meta = with pkgs.stdenv.lib.maintainers; {
+    maintainers = [ ma27 ];
+  };
+
+  nodes.yabar = {
+    imports = [ ./common/x11.nix ./common/user-account.nix ];
+
+    services.xserver.displayManager.auto.user = "bob";
+
+    programs.yabar.enable = true;
+  };
+
+  testScript = ''
+    $yabar->start;
+    $yabar->waitForX;
+
+    $yabar->waitForUnit("yabar.service", "bob");
+  '';
+})
diff --git a/pkgs/applications/altcoins/default.nix b/pkgs/applications/altcoins/default.nix
index 757c6e276fdf..37df75ae110e 100644
--- a/pkgs/applications/altcoins/default.nix
+++ b/pkgs/applications/altcoins/default.nix
@@ -26,6 +26,8 @@ rec {
 
   dashpay = callPackage ./dashpay.nix { };
 
+  dero = callPackage ./dero.nix { };
+
   dogecoin  = callPackage ./dogecoin.nix { withGui = true; };
   dogecoind = callPackage ./dogecoin.nix { withGui = false; };
 
@@ -59,6 +61,8 @@ rec {
 
   stellar-core = callPackage ./stellar-core.nix { };
 
+  sumokoin = callPackage ./sumokoin.nix { };
+
   zcash = callPackage ./zcash {
     withGui = false;
     openssl = openssl_1_1_0;
diff --git a/pkgs/applications/altcoins/dero.nix b/pkgs/applications/altcoins/dero.nix
new file mode 100644
index 000000000000..f3e24b6c015b
--- /dev/null
+++ b/pkgs/applications/altcoins/dero.nix
@@ -0,0 +1,27 @@
+{ lib, stdenv, fetchFromGitHub, cmake, pkgconfig, unbound, openssl, boost
+, libunwind, lmdb, miniupnpc, readline }:
+
+stdenv.mkDerivation rec {
+  name = "dero-${version}";
+  version = "0.11.3";
+
+  src = fetchFromGitHub {
+    owner = "deroproject";
+    repo = "dero";
+    rev = "v${version}";
+    sha256 = "0cv4yg2lkmkdhlc3753gnbg1nzldk2kxwdyizwhvanq3ycqban4b";
+  };
+
+  nativeBuildInputs = [ cmake pkgconfig ];
+  buildInputs = [ boost miniupnpc openssl lmdb unbound readline ];
+
+  enableParallelBuilding = true;
+
+  meta = with lib; {
+    description = "Secure, private blockchain with smart contracts based on Monero";
+    homepage = "https://dero.io/";
+    license = licenses.bsd3;
+    maintainers = with maintainers; [ fpletz ];
+    platforms = platforms.linux;
+  };
+}
diff --git a/pkgs/applications/altcoins/go-ethereum.nix b/pkgs/applications/altcoins/go-ethereum.nix
index ca28dfb76b80..f35213a085b1 100644
--- a/pkgs/applications/altcoins/go-ethereum.nix
+++ b/pkgs/applications/altcoins/go-ethereum.nix
@@ -2,7 +2,7 @@
 
 buildGoPackage rec {
   name = "go-ethereum-${version}";
-  version = "1.7.3";
+  version = "1.8.1";
   goPackagePath = "github.com/ethereum/go-ethereum";
 
   # Fix for usb-related segmentation faults on darwin
@@ -16,7 +16,7 @@ buildGoPackage rec {
     owner = "ethereum";
     repo = "go-ethereum";
     rev = "v${version}";
-    sha256 = "1w6rbq2qpjyf2v9mr18yiv2af1h2sgyvgrdk4bd8ixgl3qcd5b11";
+    sha256 = "0k7ly9cw68ranksa1fdn7v2lncmlqgabw3qiiyqya2xz3s4aazlf";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/applications/altcoins/sumokoin.nix b/pkgs/applications/altcoins/sumokoin.nix
new file mode 100644
index 000000000000..026008b2761a
--- /dev/null
+++ b/pkgs/applications/altcoins/sumokoin.nix
@@ -0,0 +1,35 @@
+{ lib, stdenv, fetchFromGitHub, cmake, unbound, openssl, boost
+, libunwind, lmdb, miniupnpc }:
+
+stdenv.mkDerivation rec {
+  name = "sumokoin-${version}";
+  version = "0.2.0.0";
+
+  src = fetchFromGitHub {
+    owner = "sumoprojects";
+    repo = "sumokoin";
+    rev = "v${version}";
+    sha256 = "0ndgcawhxh3qb3llrrilrwzhs36qpxv7f53rxgcansbff9b3za6n";
+  };
+
+  nativeBuildInputs = [ cmake ];
+  buildInputs = [ unbound openssl boost libunwind lmdb miniupnpc ];
+
+  postPatch = ''
+    substituteInPlace src/blockchain_db/lmdb/db_lmdb.cpp --replace mdb_size_t size_t
+  '';
+
+  cmakeFlags = [
+    "-DLMDB_INCLUDE=${lmdb}/include"
+  ];
+
+  enableParallelBuilding = true;
+
+  meta = with lib; {
+    description = "Sumokoin is a fork of Monero and a truely fungible cryptocurrency";
+    homepage = "https://www.sumokoin.org/";
+    license = licenses.bsd3;
+    maintainers = with maintainers; [ fpletz ];
+    platforms = platforms.linux;
+  };
+}
diff --git a/pkgs/applications/audio/cdparanoia/default.nix b/pkgs/applications/audio/cdparanoia/default.nix
index 34dba5e206fa..d4d302f07d21 100644
--- a/pkgs/applications/audio/cdparanoia/default.nix
+++ b/pkgs/applications/audio/cdparanoia/default.nix
@@ -17,7 +17,7 @@ stdenv.mkDerivation rec {
       url = "https://trac.macports.org/export/70964/trunk/dports/audio/cdparanoia/files/patch-paranoia_paranoia.c.10.4.diff";
       sha256 = "17l2qhn8sh4jy6ryy5si6ll6dndcm0r537rlmk4a6a8vkn852vad";
     })
-  ];
+  ] ++ stdenv.lib.optional stdenv.hostPlatform.isMusl ./utils.patch;
 
   buildInputs = stdenv.lib.optional stdenv.isAarch64 autoreconfHook;
 
diff --git a/pkgs/applications/audio/cdparanoia/utils.patch b/pkgs/applications/audio/cdparanoia/utils.patch
new file mode 100644
index 000000000000..338e5303dcd0
--- /dev/null
+++ b/pkgs/applications/audio/cdparanoia/utils.patch
@@ -0,0 +1,68 @@
+diff --git cdparanoia-III-10.2/interface/utils.h cdparanoia-III-10.2/interface/utils.h
+index c9647da..68c1a3a 100644
+--- cdparanoia-III-10.2/interface/utils.h
++++ cdparanoia-III-10.2/interface/utils.h
+@@ -1,4 +1,6 @@
+-#include <endian.h>
++#include <unistd.h>
++#include <stdint.h>
++#include <stdlib.h>
+ #include <stdio.h>
+ #include <errno.h>
+ #include <string.h>
+@@ -14,15 +16,15 @@ static inline int bigendianp(void){
+ }
+ 
+ static inline int32_t swap32(int32_t x){
+-  return((((u_int32_t)x & 0x000000ffU) << 24) | 
+-	 (((u_int32_t)x & 0x0000ff00U) <<  8) | 
+-	 (((u_int32_t)x & 0x00ff0000U) >>  8) | 
+-	 (((u_int32_t)x & 0xff000000U) >> 24));
++  return((((uint32_t)x & 0x000000ffU) << 24) | 
++	 (((uint32_t)x & 0x0000ff00U) <<  8) | 
++	 (((uint32_t)x & 0x00ff0000U) >>  8) | 
++	 (((uint32_t)x & 0xff000000U) >> 24));
+ }
+ 
+ static inline int16_t swap16(int16_t x){
+-  return((((u_int16_t)x & 0x00ffU) <<  8) | 
+-	 (((u_int16_t)x & 0xff00U) >>  8));
++  return((((uint16_t)x & 0x00ffU) <<  8) | 
++	 (((uint16_t)x & 0xff00U) >>  8));
+ }
+ 
+ #if BYTE_ORDER == LITTLE_ENDIAN
+diff --git cdparanoia-III-10.2/utils.h cdparanoia-III-10.2/utils.h
+index 10dce58..6211ce3 100644
+--- cdparanoia-III-10.2/utils.h
++++ cdparanoia-III-10.2/utils.h
+@@ -1,5 +1,6 @@
++#include <unistd.h>
++#include <stdint.h>
+ #include <stdlib.h>
+-#include <endian.h>
+ #include <stdio.h>
+ #include <errno.h>
+ #include <string.h>
+@@ -18,15 +19,15 @@ static inline int bigendianp(void){
+ }
+ 
+ static inline int32_t swap32(int32_t x){
+-  return((((u_int32_t)x & 0x000000ffU) << 24) | 
+-	 (((u_int32_t)x & 0x0000ff00U) <<  8) | 
+-	 (((u_int32_t)x & 0x00ff0000U) >>  8) | 
+-	 (((u_int32_t)x & 0xff000000U) >> 24));
++  return((((uint32_t)x & 0x000000ffU) << 24) | 
++	 (((uint32_t)x & 0x0000ff00U) <<  8) | 
++	 (((uint32_t)x & 0x00ff0000U) >>  8) | 
++	 (((uint32_t)x & 0xff000000U) >> 24));
+ }
+ 
+ static inline int16_t swap16(int16_t x){
+-  return((((u_int16_t)x & 0x00ffU) <<  8) | 
+-	 (((u_int16_t)x & 0xff00U) >>  8));
++  return((((uint16_t)x & 0x00ffU) <<  8) | 
++	 (((uint16_t)x & 0xff00U) >>  8));
+ }
+ 
+ #if BYTE_ORDER == LITTLE_ENDIAN
diff --git a/pkgs/applications/audio/faust/faust2.nix b/pkgs/applications/audio/faust/faust2.nix
index 460c9da7ac31..877bd26a5c1b 100644
--- a/pkgs/applications/audio/faust/faust2.nix
+++ b/pkgs/applications/audio/faust/faust2.nix
@@ -16,13 +16,13 @@ with stdenv.lib.strings;
 
 let
 
-  version = "2.5.10";
+  version = "2.5.21";
 
   src = fetchFromGitHub {
     owner = "grame-cncm";
     repo = "faust";
-    rev = "v${builtins.replaceStrings ["."] ["-"] version}";
-    sha256 = "0sjhy7axa2dj1977iz6zmqvz9qzalcfnrx2fqx3xmk9hly847d6z";
+    rev = "${version}";
+    sha256 = "1kfrcfhpzkpjxsrvgwmc2valgwfb4b7gfwwnlnjq6f6dp56yflpz";
     fetchSubmodules = true;
   };
 
diff --git a/pkgs/applications/audio/gpodder/default.nix b/pkgs/applications/audio/gpodder/default.nix
index bdb32ab01e24..0cf5a3610038 100644
--- a/pkgs/applications/audio/gpodder/default.nix
+++ b/pkgs/applications/audio/gpodder/default.nix
@@ -5,7 +5,7 @@
 
 python3Packages.buildPythonApplication rec {
   name = "gpodder-${version}";
-  version = "3.10.0";
+  version = "3.10.1";
 
   format = "other";
 
@@ -13,7 +13,7 @@ python3Packages.buildPythonApplication rec {
     owner = "gpodder";
     repo = "gpodder";
     rev = version;
-    sha256 = "0f3m1kcj641xiwsxan66k81lvslkl3aziakn5z17y4mmdci79jv0";
+    sha256 = "1cqhm5h0kkdb2m691dbj8i3bixl7bw0iww2pl6k1jkz8mgafyd9d";
   };
 
   postPatch = with stdenv.lib; ''
@@ -26,7 +26,11 @@ python3Packages.buildPythonApplication rec {
     glibcLocales
   ];
 
-  buildInputs = [ python3 gobjectIntrospection ];
+  buildInputs = [
+    python3
+    gobjectIntrospection
+    gnome3.defaultIconTheme
+  ];
 
   checkInputs = with python3Packages; [
     coverage minimock
diff --git a/pkgs/applications/audio/infamousPlugins/default.nix b/pkgs/applications/audio/infamousPlugins/default.nix
new file mode 100644
index 000000000000..9fe0820e5d6f
--- /dev/null
+++ b/pkgs/applications/audio/infamousPlugins/default.nix
@@ -0,0 +1,37 @@
+{ stdenv, fetchFromGitHub, pkgconfig, cairomm, cmake, lv2, libpthreadstubs, libXdmcp, libXft, ntk, pcre, fftwFloat, zita-resampler }:
+
+stdenv.mkDerivation rec {
+  name = "infamousPlugins-v${version}";
+  version = "0.2.04";
+
+  src = fetchFromGitHub {
+    owner = "ssj71";
+    repo = "infamousPlugins";
+    rev = "v${version}";
+    sha256 = "0hmqk80w4qxq09iag7b7srf2g0wigkyhzq0ywxvhz2iz0hq9k0dh";
+  };
+
+  nativeBuildInputs = [ pkgconfig cmake ];
+  buildInputs = [ cairomm lv2 libpthreadstubs libXdmcp libXft ntk pcre fftwFloat zita-resampler ];
+
+  meta = with stdenv.lib; {
+    homepage = https://ssj71.github.io/infamousPlugins;
+    description = "A collection of open-source LV2 plugins";
+    longDescription = ''
+      These are audio plugins in the LV2 format, developed for linux. Most are suitable for live use.
+      This collection contains:
+        * Cellular Automaton Synth - additive synthesizer, where 16 harmonics are added according to rules of elementary cellular automata
+        * Envelope Follower - a fully featured envelope follower plugin
+        * Hip2B - a distortion/destroyer plugin
+        * cheap distortion - another distortion plugin, but this one I wanted to get it as light as possible
+        * stuck - a clone of the electro-harmonix freeze
+        * power cut - this effect is commonly called tape stop
+        * power up - the opposite of the power cut
+        * ewham - a whammy style pitchshifter
+        * lushlife - a simulated double tracking plugin capable of everything from a thin beatle effect to thick lush choruses to weird outlandish effects
+    '';
+    license = licenses.gpl2;
+    maintainers = [ maintainers.magnetophon ];
+    platforms = platforms.linux;
+  };
+}
diff --git a/pkgs/applications/audio/mikmod/default.nix b/pkgs/applications/audio/mikmod/default.nix
index 918b743fef7a..f077afec8b20 100644
--- a/pkgs/applications/audio/mikmod/default.nix
+++ b/pkgs/applications/audio/mikmod/default.nix
@@ -1,11 +1,11 @@
 { stdenv, fetchurl, libmikmod, ncurses, alsaLib }:
 
 stdenv.mkDerivation rec {
-  name = "mikmod-3.2.6";
+  name = "mikmod-3.2.8";
 
   src = fetchurl {
     url = "mirror://sourceforge/mikmod/${name}.tar.gz";
-    sha256 = "0wr61raj10rpl64mk3x9g3rwys898fbzyg93c6mrz89nvc74wm04";
+    sha256 = "1k54p8pn3jinha0f2i23ad15pf1pamibzcxjrbzjbklpcz1ipc6v";
   };
 
   buildInputs = [ libmikmod ncurses ];
diff --git a/pkgs/applications/audio/mopidy-iris/default.nix b/pkgs/applications/audio/mopidy-iris/default.nix
index 1f309c4503bf..219b04b4ec41 100644
--- a/pkgs/applications/audio/mopidy-iris/default.nix
+++ b/pkgs/applications/audio/mopidy-iris/default.nix
@@ -2,12 +2,12 @@
 
 pythonPackages.buildPythonApplication rec {
   name = "mopidy-iris-${version}";
-  version = "3.11.0";
+  version = "3.12.4";
 
   src = pythonPackages.fetchPypi {
     inherit version;
     pname = "Mopidy-Iris";
-    sha256 = "1a9pn35vv1b9v0s30ajjg7gjjvcfjwgfyp7z61m567nv6cr37vhq";
+    sha256 = "0k64rfnp5b4rybb396zzx12wnnca43a8l1s6s6dr6cflgk9aws87";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/applications/audio/mp3blaster/default.nix b/pkgs/applications/audio/mp3blaster/default.nix
new file mode 100644
index 000000000000..96b3533a6f5c
--- /dev/null
+++ b/pkgs/applications/audio/mp3blaster/default.nix
@@ -0,0 +1,27 @@
+{ stdenv, fetchFromGitHub, ncurses }:
+stdenv.mkDerivation rec {
+
+  version = "3.2.6";
+
+  name = "mp3blaster-${version}";
+
+  src = fetchFromGitHub {
+    owner = "stragulus";
+    repo = "mp3blaster";
+    rev = "v${version}";
+    sha256 = "0pzwml3yhysn8vyffw9q9p9rs8gixqkmg4n715vm23ib6wxbliqs";
+  };
+
+  buildInputs = [ ncurses ];
+
+  buildFlags = [ "CXXFLAGS=-Wno-narrowing" ];
+
+  meta = with stdenv.lib; {
+    description = "An audio player for the text console";
+    homepage = http://www.mp3blaster.org/;
+    license = licenses.gpl2;
+    maintainers = with maintainers; [ earldouglas ];
+    platforms = platforms.all;
+  };
+
+}
diff --git a/pkgs/applications/audio/ncpamixer/default.nix b/pkgs/applications/audio/ncpamixer/default.nix
new file mode 100644
index 000000000000..c3449ed3a4f4
--- /dev/null
+++ b/pkgs/applications/audio/ncpamixer/default.nix
@@ -0,0 +1,33 @@
+{ stdenv, fetchFromGitHub, cmake, ncurses, libpulseaudio, pkgconfig }:
+
+stdenv.mkDerivation rec {
+
+  name = "ncpamixer-${version}";
+  version = "1.2";
+
+  src = fetchFromGitHub {
+    owner = "fulhax";
+    repo = "ncpamixer";
+    rev = version;
+    sha256 = "01kvd0pg5yraymlln5xdzqj1r6adxfvvza84wxn2481kcxfral54";
+  };
+
+  buildInputs = [ ncurses libpulseaudio ];
+  nativeBuildInputs = [ cmake pkgconfig ];
+
+  configurePhase = ''
+    make PREFIX=$out build/Makefile
+  '';
+
+  buildPhase = ''
+    make build
+  '';
+
+  meta = with stdenv.lib; {
+    description = "An ncurses mixer for PulseAudio inspired by pavucontrol";
+    homepage = https://github.com/fulhax/ncpamixer;
+    license = licenses.mit;
+    platforms = platforms.linux;
+    maintainers = with maintainers; [ StijnDW ];
+  };
+}
diff --git a/pkgs/applications/audio/non/default.nix b/pkgs/applications/audio/non/default.nix
index 3b429290f7c8..c28c711d618e 100644
--- a/pkgs/applications/audio/non/default.nix
+++ b/pkgs/applications/audio/non/default.nix
@@ -4,12 +4,12 @@
 
 stdenv.mkDerivation rec {
   name = "non-${version}";
-  version = "2017-03-29";
+  version = "2018-02-15";
   src = fetchFromGitHub {
     owner = "original-male";
     repo = "non";
-    rev = "10c31e57291b6e42be53371567a722b62b32d220";
-    sha256 = "080rha4ffp7qycyg1mqcf4vj0s7z8qfvz6bxm0w29xgg2kkmb3fx";
+    rev = "5ae43bb27c42387052a73e5ffc5d33efb9d946a9";
+    sha256 = "1cljkkyi9dxqpqhx8y6l2ja4zjmlya26m26kqxml8gx08vyvddhx";
   };
 
   nativeBuildInputs = [ pkgconfig ];
diff --git a/pkgs/applications/audio/paprefs/default.nix b/pkgs/applications/audio/paprefs/default.nix
index f21c171ef609..58054070760b 100644
--- a/pkgs/applications/audio/paprefs/default.nix
+++ b/pkgs/applications/audio/paprefs/default.nix
@@ -1,4 +1,4 @@
-{ fetchurl, stdenv, pkgconfig, libpulseaudio, gtkmm2, libglademm
+{ fetchurl, stdenv, pkgconfig, pulseaudioFull, gtkmm2, libglademm
 , dbus_glib, GConf, gconfmm, intltool }:
 
 stdenv.mkDerivation rec {
@@ -9,7 +9,7 @@ stdenv.mkDerivation rec {
     sha256 = "1c5b3sb881szavly220q31g7rvpn94wr7ywlk00hqb9zaikml716";
   };
 
-  buildInputs = [ libpulseaudio gtkmm2 libglademm dbus_glib gconfmm ];
+  buildInputs = [ pulseaudioFull gtkmm2 libglademm dbus_glib gconfmm ];
 
   nativeBuildInputs = [ pkgconfig intltool ];
 
diff --git a/pkgs/applications/audio/pulseaudio-dlna/default.nix b/pkgs/applications/audio/pulseaudio-dlna/default.nix
new file mode 100644
index 000000000000..72af8aff106b
--- /dev/null
+++ b/pkgs/applications/audio/pulseaudio-dlna/default.nix
@@ -0,0 +1,50 @@
+{ fetchFromGitHub, stdenv, pythonPackages
+, mp3Support ? true, lame ? null
+, opusSupport ? true, opusTools ? null
+, faacSupport ? false, faac ? null
+, flacSupport ? true, flac ? null
+, soxSupport ? true, sox ? null
+, vorbisSupport ? true, vorbisTools ? null 
+}:
+
+assert mp3Support -> lame != null;
+assert opusSupport -> opusTools != null;
+assert faacSupport -> faac != null;
+assert flacSupport -> flac != null;
+assert soxSupport -> sox != null;
+assert vorbisSupport -> vorbisTools != null;
+
+pythonPackages.buildPythonApplication rec {
+  pname = "pulseaudio-dlna";
+  version = "2017-11-01";
+
+  src = fetchFromGitHub {
+    owner = "masmu";
+    repo = "pulseaudio-dlna";
+    rev = "4472928dd23f274193f14289f59daec411023ab0";
+    sha256 = "1dfn7036vrq49kxv4an7rayypnm5dlawsf02pfsldw877hzdamqk";
+  };
+  
+  # pulseaudio-dlna has no tests
+  doCheck = false;
+
+  propagatedBuildInputs = with pythonPackages; [
+    dbus-python docopt requests setproctitle protobuf psutil futures
+    chardet notify2 netifaces pyroute2 pygobject2 lxml zeroconf ]
+    ++ stdenv.lib.optional mp3Support lame
+    ++ stdenv.lib.optional opusSupport opusTools
+    ++ stdenv.lib.optional faacSupport faac
+    ++ stdenv.lib.optional flacSupport flac
+    ++ stdenv.lib.optional soxSupport sox
+    ++ stdenv.lib.optional vorbisSupport vorbisTools;
+
+  meta = with stdenv.lib; {
+    description = "A lightweight streaming server which brings DLNA / UPNP and Chromecast support to PulseAudio and Linux";
+    homepage = https://github.com/masmu/pulseaudio-dlna;
+
+    license = licenses.gpl3Plus;
+
+    maintainers = with maintainers; [ mog ];
+    platforms = platforms.linux;
+  };
+}
diff --git a/pkgs/applications/audio/radiotray-ng/default.nix b/pkgs/applications/audio/radiotray-ng/default.nix
index e075d68cd285..88db09fac86b 100644
--- a/pkgs/applications/audio/radiotray-ng/default.nix
+++ b/pkgs/applications/audio/radiotray-ng/default.nix
@@ -40,13 +40,13 @@ let
 in
 stdenv.mkDerivation rec {
   name = "radiotray-ng-${version}";
-  version = "0.2.0";
+  version = "0.2.1";
 
   src = fetchFromGitHub {
     owner = "ebruck";
     repo = "radiotray-ng";
     rev = "v${version}";
-    sha256 = "12mhi0q137cjdpmpczvrcr7szq1ja1r8bm0gh03b925y8xyrqp5z";
+    sha256 = "0hqg6vn8hv5pic96klf1d9vj8fibrgiqnqb5vwrg3wvakx0y32kr";
   };
 
   nativeBuildInputs = [ cmake pkgconfig wrapGAppsHook makeWrapper ];
@@ -63,10 +63,9 @@ stdenv.mkDerivation rec {
     ++ pythonInputs;
 
   prePatch = ''
-    substituteInPlace debian/CMakeLists.txt \
-      --replace /usr $out
-    substituteInPlace include/radiotray-ng/common.hpp \
-      --replace /usr $out
+    for x in debian/CMakeLists.txt include/radiotray-ng/common.hpp data/*.desktop; do
+      substituteInPlace $x --replace /usr $out
+    done
 
     # We don't find the radiotray-ng-notification icon otherwise
     substituteInPlace data/radiotray-ng.desktop \
@@ -75,6 +74,8 @@ stdenv.mkDerivation rec {
       --replace radiotray-ng-notification radiotray-ng-on
   '';
 
+  cmakeFlags = stdenv.lib.optional doCheck "-DBUILD_TESTS=ON";
+
   enableParallelBuilding = true;
 
   doCheck = true;
diff --git a/pkgs/applications/audio/sayonara/default.nix b/pkgs/applications/audio/sayonara/default.nix
new file mode 100644
index 000000000000..1bf1a8b2c49e
--- /dev/null
+++ b/pkgs/applications/audio/sayonara/default.nix
@@ -0,0 +1,45 @@
+{ stdenv, fetchurl, cmake, qt5, zlib, taglib, pkgconfig, pcre, gst_all_1 }:
+
+let
+  version = "1.0.0-git5-20180115";
+in
+stdenv.mkDerivation {
+  name = "sayonara-player-${version}";
+
+  src = fetchurl {
+    url = "https://sayonara-player.com/sw/sayonara-player-${version}.tar.gz";
+    sha256 = "1fl7zplnrrvbv1xm4g348bpd46jj39jvbm808hyjjq92i64wqg37";
+  };
+
+  nativeBuildInputs = [ cmake pkgconfig ];
+  buildInputs = with qt5; with gst_all_1;
+      [ gstreamer gst-plugins-base gst-plugins-good gst-plugins-ugly
+        pcre qtbase qttools taglib zlib
+      ];
+
+  # CMake Error at src/GUI/Resources/Icons/cmake_install.cmake:49 (file):
+  #   file cannot create directory: /usr/share/icons.  Maybe need administrative
+  #   privileges.
+  # Call Stack (most recent call first):
+  #   src/GUI/Resources/cmake_install.cmake:50 (include)
+  #   src/GUI/cmake_install.cmake:50 (include)
+  #   src/cmake_install.cmake:59 (include)
+  #   cmake_install.cmake:42 (include)
+  postPatch = ''
+    substituteInPlace src/GUI/Resources/Icons/CMakeLists.txt \
+      --replace "/usr/share" "$out/share"
+  '';
+
+  # [ 65%] Building CXX object src/Components/Engine/CMakeFiles/say_comp_engine.dir/AbstractPipeline.cpp.o
+  # /tmp/nix-build-sayonara-player-1.0.0-git5-20180115.drv-0/sayonara-player/src/Components/Engine/AbstractPipeline.cpp:28:32: fatal error: gst/app/gstappsink.h: No such file or directory
+  #  #include <gst/app/gstappsink.h>
+  NIX_CFLAGS_COMPILE = "-I${gst_all_1.gst-plugins-base.dev}/include/gstreamer-1.0";
+
+  meta = with stdenv.lib;
+    { description = "Sayonara music player";
+      homepage = https://sayonara-player.com/;
+      license = licenses.gpl3;
+      platforms = qt5.qtbase.meta.platforms;
+      maintainers = [ maintainers.deepfire ];
+    };
+}
diff --git a/pkgs/applications/audio/spotify/default.nix b/pkgs/applications/audio/spotify/default.nix
index 9ac0c49ebc31..35c5dff27106 100644
--- a/pkgs/applications/audio/spotify/default.nix
+++ b/pkgs/applications/audio/spotify/default.nix
@@ -9,7 +9,7 @@ let
   # Latest version number can be found at:
   # http://repository-origin.spotify.com/pool/non-free/s/spotify-client/
   # Be careful not to pick the testing version.
-  version = "1.0.69.336.g7edcc575-39";
+  version = "1.0.70.399.g5ffabd56-26";
 
   deps = [
     alsaLib
@@ -54,7 +54,7 @@ stdenv.mkDerivation {
 
   src = fetchurl {
     url = "https://repository-origin.spotify.com/pool/non-free/s/spotify-client/spotify-client_${version}_amd64.deb";
-    sha256 = "0bh2q7g478g7wj661fypxcbhrbq87zingfyigg7rz1shgsgwc3gd";
+    sha256 = "0kpakz11xkyqqjvln4jkhc3z5my8zgpw8m6jx954cjdbc6vkxd29";
   };
 
   buildInputs = [ dpkg makeWrapper ];
diff --git a/pkgs/applications/audio/sunvox/default.nix b/pkgs/applications/audio/sunvox/default.nix
new file mode 100644
index 000000000000..ccbceddefd2f
--- /dev/null
+++ b/pkgs/applications/audio/sunvox/default.nix
@@ -0,0 +1,48 @@
+{ stdenv, fetchurl, unzip, alsaLib, libX11, libXi, SDL2 }:
+
+let
+  libPath = stdenv.lib.makeLibraryPath [ stdenv.cc.cc alsaLib libX11 libXi SDL2 ];
+  arch =
+    if stdenv.isAarch64
+    then "arm64"
+    else if stdenv.isArm
+    then "arm_armhf_raspberry_pi"
+    else if stdenv.is64bit
+    then "x86_64"
+    else "x86";
+in
+stdenv.mkDerivation rec {
+  name = "SunVox-${version}";
+  version = "1.9.3b";
+
+  src = fetchurl {
+    url = "http://www.warmplace.ru/soft/sunvox/sunvox-${version}.zip";
+    sha256 = "0k74rcq7niw4p17vj3zp9lpgi932896dmzqv4ln43g0pz7l18c8b";
+  };
+
+  buildInputs = [ unzip ];
+
+  unpackPhase = "unzip $src";
+
+  dontBuild = true;
+
+  installPhase = ''
+    mkdir -p $out/share $out/bin
+    mv sunvox $out/share/
+
+    bin="$out/share/sunvox/sunvox/linux_${arch}/sunvox"
+    patchelf --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" \
+             --set-rpath "${libPath}" \
+             "$bin"
+
+    ln -s "$bin" $out/bin/sunvox
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Small, fast and powerful modular synthesizer with pattern-based sequencer";
+    license = licenses.unfreeRedistributable;
+    homepage = "http://www.warmplace.ru/soft/sunvox/";
+    maintainers = with maintainers; [ puffnfresh ];
+    platforms = [ "i686-linux" "x86_64-linux" ];
+  };
+}
diff --git a/pkgs/applications/audio/zam-plugins/default.nix b/pkgs/applications/audio/zam-plugins/default.nix
index f81aad4e2af1..e9a445ec1427 100644
--- a/pkgs/applications/audio/zam-plugins/default.nix
+++ b/pkgs/applications/audio/zam-plugins/default.nix
@@ -1,18 +1,18 @@
-{ stdenv, fetchgit , boost, libX11, mesa, liblo, libjack2, ladspaH, lv2, pkgconfig, rubberband, libsndfile }:
+{ stdenv, fetchgit , boost, libX11, mesa, liblo, libjack2, ladspaH, lv2, pkgconfig, rubberband, libsndfile, fftwFloat, libsamplerate }:
 
 stdenv.mkDerivation rec {
   name = "zam-plugins-${version}";
-  version = "3.9";
+  version = "3.10";
 
   src = fetchgit {
     url = "https://github.com/zamaudio/zam-plugins.git";
     deepClone = true;
-    rev = "4976cf204074c1dfaf344821e83e8d896b35107d";
-    sha256 = "1xgwl51sf2hgc5ikcnycyxaw9vy82lrcswn07b6av6i67qclm8f8";
+    rev = "a3321af1892a6994d64fb705e48ae8adf8d7df20";
+    sha256 = "0yqrs21ph2lx00p0jlc70qkmzfrnf9ihg1r3i9j5n2r903ljdg5p";
   };
 
   nativeBuildInputs = [ pkgconfig ];
-  buildInputs = [ boost libX11 mesa liblo libjack2 ladspaH lv2 rubberband libsndfile ];
+  buildInputs = [ boost libX11 mesa liblo libjack2 ladspaH lv2 rubberband libsndfile fftwFloat libsamplerate ];
 
   patchPhase = ''
     patchShebangs ./dpf/utils/generate-ttl.sh
diff --git a/pkgs/applications/backup/crashplan/crashplan-small-business.nix b/pkgs/applications/backup/crashplan/crashplan-small-business.nix
new file mode 100644
index 000000000000..9bed504103a1
--- /dev/null
+++ b/pkgs/applications/backup/crashplan/crashplan-small-business.nix
@@ -0,0 +1,103 @@
+{ stdenv, fetchurl, makeWrapper, getopt, jre, cpio, gawk, gnugrep, gnused, 
+  procps, which, gtk2, atk, glib, pango, gdk_pixbuf, cairo, freetype, 
+  fontconfig, dbus, gconf, nss, nspr, alsaLib, cups, expat, libudev, 
+  libX11, libxcb, libXi, libXcursor, libXdamage, libXrandr, libXcomposite, 
+  libXext, libXfixes, libXrender, libXtst, libXScrnSaver, nodePackages,
+  maxRam ? "1024m" }:
+
+stdenv.mkDerivation rec {
+  version = "6.7.0";
+  rev = "1512021600670_4503";
+  pname = "CrashPlanSmb";
+  name = "${pname}_${version}_${rev}";
+  
+  src = fetchurl {
+    url = "https://web-eam-msp.crashplanpro.com/client/installers/${name}_Linux.tgz";
+    sha256 = "0f7ykfxaqjlvv4hv12yc5z8y1vjsysdblv53byml7i1fy1r0q26q";
+  };
+
+  nativeBuildInputs = [ makeWrapper cpio nodePackages.asar ];
+  buildInputs = [ getopt which ];
+
+  vardir = "/var/lib/crashplan";
+  manifestdir = "${vardir}/manifest";
+  
+  postPatch = ''
+    # patch scripts/CrashPlanEngine
+    substituteInPlace scripts/CrashPlanEngine \
+      --replace /bin/ps ${procps}/bin/ps \
+      --replace awk ${gawk}/bin/awk \
+      --replace '`sed' '`${gnused}/bin/sed' \
+      --replace grep ${gnugrep}/bin/grep \
+      --replace TARGETDIR/log VARDIR/log \
+      --replace TARGETDIR/\''${NAME} VARDIR/\''${NAME} \
+      --replace \$TARGETDIR/bin/run.conf $out/bin/run.conf \
+      --replace \$VARDIR ${vardir}
+
+    # patch scripts/CrashPlanDesktop
+    substituteInPlace scripts/CrashPlanDesktop \
+      --replace awk ${gawk}/bin/awk \
+      --replace "\"\$SCRIPTDIR/..\"" "$out" \
+      --replace "\$(dirname \$SCRIPT)" "$out" \
+      --replace "\''${TARGETDIR}/log" ${vardir}/log \
+      --replace "\''${TARGETDIR}" "$out"
+  '';
+
+  installPhase = ''
+    mkdir $out
+    zcat -v ${pname}_${version}.cpi | (cd $out; cpio -i -d -v --no-preserve-owner)
+
+    install -D -m 755 scripts/CrashPlanDesktop $out/bin/CrashPlanDesktop
+    install -D -m 755 scripts/CrashPlanEngine $out/bin/CrashPlanEngine
+    install -D -m 644 scripts/run.conf $out/bin/run.conf
+    install -D -m 644 scripts/CrashPlan.desktop $out/share/applications/CrashPlan.desktop
+
+    # unpack, patch and repack app.asar to stop electron from creating /usr/local/crashplan/log to store the ui logs.
+    asar e $out/app.asar $out/app.asar-unpacked
+    rm -v $out/app.asar
+    substituteInPlace $out/app.asar-unpacked/shared_modules/shell/platform_paths.js \
+      --replace "getLogFileParentPath();" "\"$vardir/log\";"
+    asar p $out/app.asar-unpacked $out/app.asar
+
+    mv -v $out/*.asar $out/electron/resources
+    chmod 755 "$out/electron/crashplan"
+
+    rm -r $out/log
+    mv -v $out/conf $out/conf.template
+    ln -s $vardir/log $out/log
+    ln -s $vardir/cache $out/cache
+    ln -s $vardir/conf $out/conf
+
+    substituteInPlace $out/bin/run.conf \
+      --replace "-Xmx1024m" "-Xmx${maxRam}"
+
+    echo "JAVACOMMON=${jre}/bin/java" > $out/install.vars
+    echo "APP_BASENAME=CrashPlan" >> $out/install.vars
+    echo "TARGETDIR=$out" >> $out/install.vars
+    echo "BINSDIR=$out/bin" >> $out/install.vars
+    echo "MANIFESTDIR=${manifestdir}" >> $out/install.vars
+    echo "VARDIR=${vardir}" >> $out/install.vars
+    echo "INITDIR=" >> $out/install.vars
+    echo "RUNLVLDIR=" >> $out/install.vars
+    echo "INSTALLDATE=" >> $out/install.vars
+
+  '';
+
+  postFixup = ''
+    patchelf --set-interpreter ${stdenv.glibc}/lib/ld-linux-x86-64.so.2 $out/electron/crashplan
+    wrapProgram $out/bin/CrashPlanDesktop --prefix LD_LIBRARY_PATH ":" "${stdenv.lib.makeLibraryPath [ 
+      stdenv.cc.cc.lib gtk2 atk glib pango gdk_pixbuf cairo freetype 
+      fontconfig dbus gconf nss nspr alsaLib cups expat libudev 
+      libX11 libxcb libXi libXcursor libXdamage libXrandr libXcomposite 
+      libXext libXfixes libXrender libXtst libXScrnSaver]}"
+  '';
+
+  meta = with stdenv.lib; {
+    description = "An online backup solution";
+    homepage = http://www.crashplan.com/business/;
+    license = licenses.unfree;
+    platforms = [ "x86_64-linux" ];
+    maintainers = with maintainers; [ xvapx ];
+  };
+
+}
diff --git a/pkgs/applications/editors/android-studio/default.nix b/pkgs/applications/editors/android-studio/default.nix
index 4cd0553e4d2e..bf8a5f15c2f2 100644
--- a/pkgs/applications/editors/android-studio/default.nix
+++ b/pkgs/applications/editors/android-studio/default.nix
@@ -6,6 +6,7 @@ let
     };
   };
 in rec {
+  # linux-bundle
   stable = mkStudio {
     pname = "android-studio";
     version = "3.0.1.0"; # "Android Studio 3.0.1"
@@ -25,11 +26,12 @@ in rec {
     };
   };
 
+  # linux-beta-bundle
   preview = mkStudio {
     pname = "android-studio-preview";
-    version = "3.1.0.9"; # "Android Studio 3.1 Beta 1"
-    build = "173.4567466";
-    sha256Hash = "01c6a46pk5zbhwk2w038nm68fkx86nafiw1v2i5rdr93mxvx9cag";
+    version = "3.1.0.11"; # "Android Studio 3.1 Beta 3"
+    build = "173.4595152";
+    sha256Hash = "0106ggrf4mkxx3a2dn02km8rdq23sf15ifysykcay29skgdmq6wx";
 
     meta = stable.meta // {
       description = "The Official IDE for Android (preview version)";
diff --git a/pkgs/applications/editors/emacs-modes/elpa-generated.nix b/pkgs/applications/editors/emacs-modes/elpa-generated.nix
index 9d37287d84a7..7264dcb92a37 100644
--- a/pkgs/applications/editors/emacs-modes/elpa-generated.nix
+++ b/pkgs/applications/editors/emacs-modes/elpa-generated.nix
@@ -768,10 +768,10 @@
     el-search = callPackage ({ cl-print, elpaBuild, emacs, fetchurl, lib, stream }:
     elpaBuild {
         pname = "el-search";
-        version = "1.5.3";
+        version = "1.5.4";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/el-search-1.5.3.tar";
-          sha256 = "095gpanpf88j65cbf4r6c787qxi07kqpvdsh0dsdpg9m3ivmxbra";
+          url = "https://elpa.gnu.org/packages/el-search-1.5.4.tar";
+          sha256 = "1k0makrk3p6hknpnr3kbiszqzw3rpw18gnx2m8scr9vv0wif4qmk";
         };
         packageRequires = [ cl-print emacs stream ];
         meta = {
@@ -1040,10 +1040,10 @@
       }) {};
     hook-helpers = callPackage ({ elpaBuild, emacs, fetchurl, lib }: elpaBuild {
         pname = "hook-helpers";
-        version = "1.1";
+        version = "1.1.1";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/hook-helpers-1.1.tar";
-          sha256 = "0xvabl0lfc0ijr98clsyh0bqk2fdi1ncl0knn58j2p30gn9958i5";
+          url = "https://elpa.gnu.org/packages/hook-helpers-1.1.1.tar";
+          sha256 = "05nqlshdqh32smav58hzqg8wp04h7w9sxr239qrz4wqxwlxlv9im";
         };
         packageRequires = [ emacs ];
         meta = {
@@ -1637,10 +1637,10 @@
       }) {};
     paced = callPackage ({ async, elpaBuild, emacs, fetchurl, lib }: elpaBuild {
         pname = "paced";
-        version = "1.0.1";
+        version = "1.1.2";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/paced-1.0.1.tar";
-          sha256 = "1y2sl3iqz2vjgkbc859sm3h9jhnrgla9ynazy9d5rql0nsb6sn8p";
+          url = "https://elpa.gnu.org/packages/paced-1.1.2.tar";
+          sha256 = "1hxbzlzmlndj2gs9n741whi7rj6vbcnxdn89lg2l0997pqmsx58y";
         };
         packageRequires = [ async emacs ];
         meta = {
@@ -2014,10 +2014,10 @@
       }) {};
     sql-indent = callPackage ({ elpaBuild, fetchurl, lib }: elpaBuild {
         pname = "sql-indent";
-        version = "1.0";
+        version = "1.1";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/sql-indent-1.0.tar";
-          sha256 = "02cmi96mqk3bfmdh0xv5s0qx310cirs6kq0jqwk1ga41rpp596vl";
+          url = "https://elpa.gnu.org/packages/sql-indent-1.1.tar";
+          sha256 = "06q41msfir178f50nk8fnyc1rwgyq5iyy17pv8mq0zqbacjbp88z";
         };
         packageRequires = [];
         meta = {
diff --git a/pkgs/applications/editors/emacs-modes/melpa-generated.nix b/pkgs/applications/editors/emacs-modes/melpa-generated.nix
index 468b40f11816..b66c988580e2 100644
--- a/pkgs/applications/editors/emacs-modes/melpa-generated.nix
+++ b/pkgs/applications/editors/emacs-modes/melpa-generated.nix
@@ -341,8 +341,8 @@
         src = fetchFromGitHub {
           owner = "clojure-emacs";
           repo = "ac-cider";
-          rev = "d8670939bbf88079263d5ace2b8bc04cf325be36";
-          sha256 = "01g1h2j0rfih8v0yvvr5gjh3abcj2mz3jmfbis8a60ivmngab732";
+          rev = "fa13e067dd9c8c76151c7d140a2803da1d109b84";
+          sha256 = "1pklmjldnm8bf34f5q8x983d1m72l3kf51ns9vh6z704mkhv658f";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/e8adefaf2e284ef91baec3dbd3e10c868de69926/recipes/ac-cider";
@@ -761,8 +761,8 @@
         src = fetchFromGitHub {
           owner = "xcwen";
           repo = "ac-php";
-          rev = "1ad972b0394f0ecbfebae8041af96a1fe2e24cf0";
-          sha256 = "07hljgfl1d6dg50dflr467fdif39xxp0jap46x85gilrlw458hp6";
+          rev = "cf9db85af2db9150e9d9b4fecad874e16ce43f0d";
+          sha256 = "0gm15f5l91sh7syf60lnvlfnf3vivbk36gddsf3yndiwfsqh7xd0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/ac283f1b65c3ba6278e9d3236e5a19734e42b123/recipes/ac-php";
@@ -778,12 +778,12 @@
     ac-php-core = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, php-mode, popup, s, xcscope }:
     melpaBuild {
         pname = "ac-php-core";
-        version = "20180126.2015";
+        version = "20180206.202";
         src = fetchFromGitHub {
           owner = "xcwen";
           repo = "ac-php";
-          rev = "1ad972b0394f0ecbfebae8041af96a1fe2e24cf0";
-          sha256 = "07hljgfl1d6dg50dflr467fdif39xxp0jap46x85gilrlw458hp6";
+          rev = "cf9db85af2db9150e9d9b4fecad874e16ce43f0d";
+          sha256 = "0gm15f5l91sh7syf60lnvlfnf3vivbk36gddsf3yndiwfsqh7xd0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/ac283f1b65c3ba6278e9d3236e5a19734e42b123/recipes/ac-php-core";
@@ -824,8 +824,8 @@
         src = fetchFromGitHub {
           owner = "Andersbakken";
           repo = "rtags";
-          rev = "53e74892e8bd15baa4d1bd1d640dcabcba9667ee";
-          sha256 = "0ynhx1cyxvrmkadb8h81xrhxvf9wssq74xk236dhl7q1mqagnjaf";
+          rev = "2b0c88cc470b06b65232c23df4b6fbfc4b534580";
+          sha256 = "047w0khlcawwr9rz7ss52x9jzam4pdqd1cwgx7nqiyv3cd47xfsy";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/ac-rtags";
@@ -1197,12 +1197,12 @@
     adafruit-wisdom = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "adafruit-wisdom";
-        version = "20180107.1521";
+        version = "20180208.2316";
         src = fetchFromGitHub {
           owner = "gonewest818";
           repo = "adafruit-wisdom.el";
-          rev = "f637f1b7cb397d4b993a20e94687663f6f09c615";
-          sha256 = "0b5k8526p0c3xp2x5xbb5w0qgljasa1lywbbj5jqgnn64i7l5y2h";
+          rev = "c0fdfcbbbc49927e0c93656f6d4a877cca774224";
+          sha256 = "0vjx5aaj9ndpz399czhg5qsfwgibaycvb8j2acfc26mzhpycc2qy";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/18483af52c26f719fbfde626db84a67750bf4754/recipes/adafruit-wisdom";
@@ -1447,12 +1447,12 @@
     ahungry-theme = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "ahungry-theme";
-        version = "20180126.2021";
+        version = "20180130.1928";
         src = fetchFromGitHub {
           owner = "ahungry";
           repo = "color-theme-ahungry";
-          rev = "9367e4a277fdabde7433640fbae48407bab7c4da";
-          sha256 = "0y71h25vi10qirn0q48csxd1xjhha17f9za9fdvfs7pcsqmkk8im";
+          rev = "a038d91ec593d1f1b19ca66a0576d59bbc24c523";
+          sha256 = "0f86xp7l8bv4z5dgf3pamjgqyiq3kfx9gbi9wcw0m6lbza8db15a";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/520295978fd7de3f4266dd69cc30d0b4fdf09db0/recipes/ahungry-theme";
@@ -1771,12 +1771,12 @@
     ample-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "ample-theme";
-        version = "20180115.627";
+        version = "20180207.945";
         src = fetchFromGitHub {
           owner = "jordonbiondo";
           repo = "ample-theme";
-          rev = "64845a6b67627e897dd42d8302c25c03ddce2aee";
-          sha256 = "0fb5pq5242xqss02si4nlwgy073kpvf909avwdngvyg6apyk66p2";
+          rev = "366698400c555211c2082962a5d74f3dd79a78c8";
+          sha256 = "1kzb15aqy7n2wxibmnihya7n6ajs34jxp9iin96n758nza92m59c";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/d448c03202137a461ed814ce87acfac23faf676e/recipes/ample-theme";
@@ -1810,22 +1810,22 @@
           license = lib.licenses.free;
         };
       }) {};
-    amx = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    amx = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s }:
     melpaBuild {
         pname = "amx";
-        version = "20170923.835";
+        version = "20180203.1043";
         src = fetchFromGitHub {
           owner = "DarwinAwardWinner";
           repo = "amx";
-          rev = "88ab7ccb2a88b5cd3ecc4d703ae9373df3e4971c";
-          sha256 = "1n1zsrlj272scl4xcbys86d6gxnaq08vp5frd96i47c1an75p0xw";
+          rev = "356393033980746eccff950c84c6e3c2984cbae4";
+          sha256 = "12ady1k621difw8b00x8ynhynkra02nkcm22s2cyzh9vv4m505zg";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/c55bfad05343b2b0f3150fd2b4adb07a1768c1c0/recipes/amx";
           sha256 = "1ikhjvkca0lsb9j719yf6spg6nwc0qaydkd8aax162sis7kp9fap";
           name = "amx";
         };
-        packageRequires = [ emacs ];
+        packageRequires = [ emacs s ];
         meta = {
           homepage = "https://melpa.org/#/amx";
           license = lib.licenses.free;
@@ -1834,12 +1834,12 @@
     anaconda-mode = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, pythonic, s }:
     melpaBuild {
         pname = "anaconda-mode";
-        version = "20171223.1118";
+        version = "20180209.1147";
         src = fetchFromGitHub {
           owner = "proofit404";
           repo = "anaconda-mode";
-          rev = "e72e9beeb8c80acfee4d85748464d1c5147946ad";
-          sha256 = "01p83h7a40v89xp4ar587xg97y86h8p641znlbd0sqckxkn087cs";
+          rev = "8d5ff5e8a6d2e585b0f8f2765099e4e6357470ae";
+          sha256 = "0483690q1qg3hlx04ngifmc9d3s47879x3nbz14g2xzc91pcni26";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/e03b698fd3fe5b80bdd24ce01f7fba28e9da0da8/recipes/anaconda-mode";
@@ -1960,12 +1960,12 @@
     anki-editor = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "anki-editor";
-        version = "20180128.129";
+        version = "20180210.633";
         src = fetchFromGitHub {
           owner = "louietan";
           repo = "anki-editor";
-          rev = "690121ce582105239f8bf20a9c011b8c6bb1661a";
-          sha256 = "168lixn9s3s1p33qw8x6wr5ll6mikkx3316xfsql0bdnz1rkk6cp";
+          rev = "a4a018d49e7c1fb01386216be6b8572b5ca33f94";
+          sha256 = "15mwbg0yrv8vs2wgn7vb2psk6qw29vivq778hxg7k9f4ak7kn7ls";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/8155d649e4b129d0c72da6bb2b1aac66c8483491/recipes/anki-editor";
@@ -2526,12 +2526,12 @@
     apiwrap = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "apiwrap";
-        version = "20180125.612";
+        version = "20180201.637";
         src = fetchFromGitHub {
           owner = "vermiculus";
           repo = "apiwrap.el";
-          rev = "dfb500b394cfb8332f40d8b9ba344f106fdb9370";
-          sha256 = "1w6dfnrz3gi2d800k5ih2daak5krnpddkzjhmv92nyvgrn7x3hd3";
+          rev = "44fe79d56bafaaf3a688e5441298ec5f7bbf419e";
+          sha256 = "12i39kl4fj1xhzrdw24i4mi2m3aj2w3isxpcyr48z23d1x0grviq";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/0197fd3657e65e3826375d9b6f19da3058366c91/recipes/apiwrap";
@@ -2987,12 +2987,12 @@
     atom-one-dark-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "atom-one-dark-theme";
-        version = "20180116.1024";
+        version = "20180201.1853";
         src = fetchFromGitHub {
           owner = "jonathanchu";
           repo = "atom-one-dark-theme";
-          rev = "fbe026c64f53bf5afa27c55fda6118d45cea7d5e";
-          sha256 = "0hg8drfcd6y6mis5xz9b0a43d5agfsrw39ri2i2p6gcm4mii1041";
+          rev = "bf5b76e472d22577fa406c7088a1c2d99fe4b636";
+          sha256 = "08hrnv7jyzcnh4iyf5r3b1y4wbynk4fraxhkdgwmxzr666aq7cn7";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3ba1c4625c9603372746a6c2edb69d65f0ef79f5/recipes/atom-one-dark-theme";
@@ -3764,12 +3764,12 @@
     autobookmarks = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "autobookmarks";
-        version = "20171021.1532";
+        version = "20180131.535";
         src = fetchFromGitHub {
           owner = "Fuco1";
           repo = "autobookmarks";
-          rev = "b40c69f2d1c419adad516bee81b07b99110e5cc3";
-          sha256 = "0dailajx26dixlibqps5wfh224ps7azm453lmzxjc2d10mgapi5v";
+          rev = "93610f22500ac207f86e159d411de15082a8befb";
+          sha256 = "1ydqc2ry43sibf8xa99w2w6prxh5gmlmcinp0z67yhdcz4dh4v2v";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/e40e6ebeb30b3f23ad37a695e011431a48c5a62e/recipes/autobookmarks";
@@ -3974,12 +3974,12 @@
     avk-emacs-themes = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "avk-emacs-themes";
-        version = "20180121.246";
+        version = "20180205.2254";
         src = fetchFromGitHub {
           owner = "avkoval";
           repo = "avk-emacs-themes";
-          rev = "7f1da34f0d74e5a922400b05fcfada5df1c0e3ce";
-          sha256 = "13pcd61a81f7cby5lk6hnasp95khhrgnqz8v738g2vwsqbfqbwyq";
+          rev = "1a119d0b52f0755fa14ad4d8c6e00e2e720b7732";
+          sha256 = "1im1bvrcy9163414328yfmsz2hb0whqxnd6wpmh8hvh6vpbmwaj7";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/ef362a76a3881c7596dcc2639df588227b3713c0/recipes/avk-emacs-themes";
@@ -4118,18 +4118,39 @@
           license = lib.licenses.free;
         };
       }) {};
+    aws-snippets = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, yasnippet }:
+    melpaBuild {
+        pname = "aws-snippets";
+        version = "20180207.622";
+        src = fetchFromGitHub {
+          owner = "baron42bba";
+          repo = "aws-snippets";
+          rev = "a6e7d102c5b1143f4787a160cbf52c1e8ab48d09";
+          sha256 = "08nbcddmi2fq6hf324qhywy29pwixlfd5lnd5qlfirzrvdyz7crv";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/485aa401a6a14cd4a916474d9a7df12cdf45d591/recipes/aws-snippets";
+          sha256 = "1p2il4ig3nafsapa87hgghw6ri9d5qqi0hl8zjyypa06rcnag9g9";
+          name = "aws-snippets";
+        };
+        packageRequires = [ yasnippet ];
+        meta = {
+          homepage = "https://melpa.org/#/aws-snippets";
+          license = lib.licenses.free;
+        };
+      }) {};
     axiom-environment = callPackage ({ emacs, fetchgit, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "axiom-environment";
         version = "20171111.1152";
         src = fetchgit {
-          url = "https://bitbucket.org/pdo/axiom-environment.git";
+          url = "https://bitbucket.org/pdo/axiom-environment";
           rev = "b4f0fa9cd013e107d2af8e2ebedff8a7f40be7b5";
           sha256 = "0p2mg2824mw8l1zrfq5va1mnxg0ib5f960306vvsm6b3pi1w5kv0";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/9f07feb8686c76c330f282320b9f653dc16cadd5/recipes/axiom-environment";
-          sha256 = "0lr2kdm6jr25mi6s6mpahb8r56d3800r7jgljjdiz4ab36zqvgz3";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/8b4c6b03c5ff78ce327dcf66b175e266bbc53dbf/recipes/axiom-environment";
+          sha256 = "1hzfxdwhgv0z9136k7bdjhqjrkawsjmvqch6za6p7nkpd9ikr2zb";
           name = "axiom-environment";
         };
         packageRequires = [ emacs ];
@@ -4313,15 +4334,36 @@
           license = lib.licenses.free;
         };
       }) {};
+    bart-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "bart-mode";
+        version = "20180131.1829";
+        src = fetchFromGitHub {
+          owner = "mschuldt";
+          repo = "bart-mode";
+          rev = "3d8573713b6dbaf52402de9c15cb34eb3c89a67b";
+          sha256 = "0192fc8fnkmnpwjf1qncvp5h7m8n1hlc697mrsn8ls7pnna01phq";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/8f9cb09c07cb9fdef15de3e8dbfb6725d97dff6f/recipes/bart-mode";
+          sha256 = "0wyfsf7kqfghnci9rlk9x0rkai6x7hy3vfzkgh7s2yz081p1kfam";
+          name = "bart-mode";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/bart-mode";
+          license = lib.licenses.free;
+        };
+      }) {};
     base16-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "base16-theme";
-        version = "20180114.1149";
+        version = "20180211.1545";
         src = fetchFromGitHub {
           owner = "belak";
           repo = "base16-emacs";
-          rev = "3492ce6613e974a329c8773e09a615c28b48aa10";
-          sha256 = "140yxkg1gnfhmsw6pira2p0nq2ll1x8swi9rlngraxshldf0c6zv";
+          rev = "2c3f8dc0f00446376ed1d1e7776d118337e42a41";
+          sha256 = "03z477y26gwnrd1hy9ysmdqxih54adlkbvgd57m4s6zfcd6f9cyx";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/30862f6be74882cfb57fb031f7318d3fd15551e3/recipes/base16-theme";
@@ -4608,12 +4650,12 @@
     bbyac = callPackage ({ browse-kill-ring, cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "bbyac";
-        version = "20171214.2054";
+        version = "20180206.641";
         src = fetchFromGitHub {
           owner = "baohaojun";
           repo = "bbyac";
-          rev = "b355c87723746dc61da464afba2adf9d4ece1db0";
-          sha256 = "18l6423s23w3vri49ncs7lpnfamgzc7xm0lqv3x1020030m0lzp2";
+          rev = "9f0de9cad13801891ffb590dc09f51ff9a7cb225";
+          sha256 = "0q0i1j8ljfd61rk6d5fys7wvdbym9pz5nhwyfvmm0ijmy19d1ppz";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/92c10c13a1bd19c8bdbca128852d1c91b76f7002/recipes/bbyac";
@@ -4797,12 +4839,12 @@
     better-shell = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "better-shell";
-        version = "20170215.1020";
+        version = "20180209.1207";
         src = fetchFromGitHub {
           owner = "killdash9";
           repo = "better-shell";
-          rev = "4ee06b8791f7363a19109d9ea6c5ee95ce998d33";
-          sha256 = "08w3z4srbz478rmnnzjmbbd5bknady417x7s0r3nxszkxfpn3iy5";
+          rev = "2e9f2f3e7945c27988c50d8de43e681662d6a467";
+          sha256 = "1ccvfpfdkqb1ga7jqq0kgvifa5gqnilb4nn8ghlbxik1901xvr5z";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/better-shell";
@@ -4906,8 +4948,8 @@
         src = fetchFromGitHub {
           owner = "cadadr";
           repo = "elisp";
-          rev = "41045e36a31782ecdfeb49918629fc4af94876e7";
-          sha256 = "0isvmly7pslb9q7nvbkdwfja9aq9wa73azbncgsa63a2wxmwjqac";
+          rev = "497c7e68df5e3b6b8c3ebaaf6edfce6b2d29b616";
+          sha256 = "1j15dfg1mr21vyf7c9h3dij1pnikwvmxr3rs0vdrx8lz9x321amf";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/8b8308e72c4437237fded29db1f60b3eba0edd26/recipes/bibliothek";
@@ -5032,8 +5074,8 @@
         src = fetchFromGitHub {
           owner = "jwiegley";
           repo = "use-package";
-          rev = "8ecb0f1c56eaeb04213b476866eaa6939f735a61";
-          sha256 = "1w4v3zsz2ypmjdysql0v0jk326bdf1jc7w0l1kn0flzsl2l70yn8";
+          rev = "6af4b6caf67f5fbd63429d27fa54a92933df966a";
+          sha256 = "13qp22m3sd1x84776d9v3h2071zj1xlmkdqi6s6wks6gk3ybyia1";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/6240afa625290187785e4b7535ee7b0d7aad8969/recipes/bind-chord";
@@ -5053,8 +5095,8 @@
         src = fetchFromGitHub {
           owner = "jwiegley";
           repo = "use-package";
-          rev = "8ecb0f1c56eaeb04213b476866eaa6939f735a61";
-          sha256 = "1w4v3zsz2ypmjdysql0v0jk326bdf1jc7w0l1kn0flzsl2l70yn8";
+          rev = "6af4b6caf67f5fbd63429d27fa54a92933df966a";
+          sha256 = "13qp22m3sd1x84776d9v3h2071zj1xlmkdqi6s6wks6gk3ybyia1";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/d39d33af6b6c9af9fe49bda319ea05c711a1b16e/recipes/bind-key";
@@ -6560,12 +6602,12 @@
     cal-china-x = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "cal-china-x";
-        version = "20170122.1100";
+        version = "20180211.1101";
         src = fetchFromGitHub {
           owner = "xwl";
           repo = "cal-china-x";
-          rev = "2e9f8e17969a32268fa1c69b500d28590338a98e";
-          sha256 = "1qqy0phjxqc8nw7aijlnfqybqicnl559skgiag5syvgnfh4965f0";
+          rev = "e9b309065829af3a9a0c526509bd64d9228fdced";
+          sha256 = "0wipcsr0dry2r9sw7lcz5hw16b5gpax7qr2nbdlcwj3j9axqipyg";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/c1098d34012fa72f8c8c30d5f0f495fdbe1d3d65/recipes/cal-china-x";
@@ -6774,8 +6816,8 @@
         src = fetchFromGitHub {
           owner = "ocaml";
           repo = "ocaml";
-          rev = "261c7144e18d54dd38ec1b0b48ae6e7c46eccb02";
-          sha256 = "1687rg64i64if3mm0k8sjjbblpkshdhf5aksm8gx24gm1vw3yid6";
+          rev = "932f5db4425fdf7bae491d98e8cd702ab58e9667";
+          sha256 = "1m1xm7vagjvc2zlh8iddvjfzlgxm4fgl76afzlpvjhxmwb8zkw5v";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/d5a3263cdcc229b11a3e96edbf632d56f32c47aa/recipes/caml";
@@ -7186,9 +7228,9 @@
           license = lib.licenses.free;
         };
       }) {};
-    centered-window-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    centered-window = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
-        pname = "centered-window-mode";
+        pname = "centered-window";
         version = "20171127.149";
         src = fetchFromGitHub {
           owner = "anler";
@@ -7197,13 +7239,13 @@
           sha256 = "1z3zi6zy1z68g4sfiv21l998n04hbbqp660khind6ap8yjjn8ik8";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/7fabdb05de9b8ec18a3a566f99688b50443b6b44/recipes/centered-window-mode";
-          sha256 = "08pmk3rqgbk5fzhxx1kd8rp2k5r5vd2jc9k2phrqg75pf89h3zf4";
-          name = "centered-window-mode";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/58bfd795d4d620f0c83384fb03008e129c71dc09/recipes/centered-window";
+          sha256 = "0w6na4ld79bpmkiv6glbrphc32v6g2rcrpi28259i94jhgy1kxqk";
+          name = "centered-window";
         };
-        packageRequires = [];
+        packageRequires = [ emacs ];
         meta = {
-          homepage = "https://melpa.org/#/centered-window-mode";
+          homepage = "https://melpa.org/#/centered-window";
           license = lib.licenses.free;
         };
       }) {};
@@ -7277,8 +7319,8 @@
         src = fetchFromGitHub {
           owner = "cfengine";
           repo = "core";
-          rev = "e7f50592d1ff0c8e2fa175e56190566f447fbaf2";
-          sha256 = "10f2an6pmz7a088rllf7k1kcyllak6xr4fhvxqgvyqm1h1jbqjbi";
+          rev = "cc2c7d130d7ae5f1402c5edcad53237d9d63fe87";
+          sha256 = "18s6bcddwc8h34bn59xq4hkrn1gyhrqrkwc8y2bz4zsffmjd99z7";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/c737839aeda583e61257ad40157e24df7f918b0f/recipes/cfengine-code-style";
@@ -7861,12 +7903,12 @@
     cider = callPackage ({ clojure-mode, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, pkg-info, queue, seq, spinner }:
     melpaBuild {
         pname = "cider";
-        version = "20180129.1017";
+        version = "20180211.538";
         src = fetchFromGitHub {
           owner = "clojure-emacs";
           repo = "cider";
-          rev = "c51903c8ba144ddb8e2b742db5daa572e09e6b97";
-          sha256 = "066fvw3dgnrakl5bjpmkymnvv0nzhlbil15xhaywdygy2cylm00d";
+          rev = "36f1934dc8ff9557e3abef9a93ac468ac453404c";
+          sha256 = "0n3xk50jkj2k04j80p1wlxicagh1mrhgsxs4lfgdqsj4ypb9s1ay";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/55a937aed818dbe41530037da315f705205f189b/recipes/cider";
@@ -8524,12 +8566,12 @@
     clojure-cheatsheet = callPackage ({ cider, fetchFromGitHub, fetchurl, helm, lib, melpaBuild }:
     melpaBuild {
         pname = "clojure-cheatsheet";
-        version = "20161004.2328";
+        version = "20180201.4";
         src = fetchFromGitHub {
           owner = "clojure-emacs";
           repo = "clojure-cheatsheet";
-          rev = "57e877d9466934b5319989b542f93b42dffec9ae";
-          sha256 = "1d61q50h4vxk8i3jwxf71rbqah7ydfsd0dny59zq0klszfz2q26b";
+          rev = "85c382317a56bbdfac03ae95999c28fc0cde65d7";
+          sha256 = "0w9l6nz583qyldz44jqdh4414rgm6n2fzbaj5hsr5j1bkdizq7xl";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/0569da79bd8145df334965c5d4364a50b6b548fa/recipes/clojure-cheatsheet";
@@ -8545,12 +8587,12 @@
     clojure-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "clojure-mode";
-        version = "20180121.1011";
+        version = "20180202.922";
         src = fetchFromGitHub {
           owner = "clojure-emacs";
           repo = "clojure-mode";
-          rev = "59e9247d64ca82d1e01bb21ee49df1220120fb0e";
-          sha256 = "1ngirh0kp53i2qcvzkf84av8fijp23rfjfhwzkwhiihs3zy63356";
+          rev = "5cf0fd9360dc5a9a95464601319062673d213807";
+          sha256 = "07ignia68340fjd0qnlrmgb7p6v15xysjx30xxfvd215slpjc4qw";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/5e3cd2e6ee52692dc7b2a04245137130a9f521c7/recipes/clojure-mode";
@@ -8570,8 +8612,8 @@
         src = fetchFromGitHub {
           owner = "clojure-emacs";
           repo = "clojure-mode";
-          rev = "59e9247d64ca82d1e01bb21ee49df1220120fb0e";
-          sha256 = "1ngirh0kp53i2qcvzkf84av8fijp23rfjfhwzkwhiihs3zy63356";
+          rev = "5cf0fd9360dc5a9a95464601319062673d213807";
+          sha256 = "07ignia68340fjd0qnlrmgb7p6v15xysjx30xxfvd215slpjc4qw";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/5e3cd2e6ee52692dc7b2a04245137130a9f521c7/recipes/clojure-mode-extra-font-locking";
@@ -8629,12 +8671,12 @@
     clomacs = callPackage ({ cider, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s, simple-httpd }:
     melpaBuild {
         pname = "clomacs";
-        version = "20180113.1550";
+        version = "20180211.421";
         src = fetchFromGitHub {
           owner = "clojure-emacs";
           repo = "clomacs";
-          rev = "38240d15e4929a3c9f3788815f9743a855926812";
-          sha256 = "0vql6hcraa6y6njxz62kwwfnkhl8l2gjs52bvpgsrgrkq471w48h";
+          rev = "2fa47d068f4955424e810cbe94d861a103efc259";
+          sha256 = "0m57hvq8s6cigv7ajmim71320bj06a2wk9v82pbvxpjqyyijpkym";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/345f9797e87e3f5f957c167a5e3d33d1e31b50a3/recipes/clomacs";
@@ -8776,12 +8818,12 @@
     cmake-ide = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, levenshtein, lib, melpaBuild, s, seq }:
     melpaBuild {
         pname = "cmake-ide";
-        version = "20180122.1301";
+        version = "20180212.258";
         src = fetchFromGitHub {
           owner = "atilaneves";
           repo = "cmake-ide";
-          rev = "21c1ca99393ea0160f0503a6adb8f3606d33926a";
-          sha256 = "11kqczlc8rwq9v9wk15h8hzhdffz9nxifr9laa07bx74yiddxmyj";
+          rev = "91dd693dca350d0744fcbaa2b5a36029fb17adcb";
+          sha256 = "1gy32n8xslgdsrw9riiy1rf5pxsqiwp7is71qc6z2qp2fn2dr83j";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/17e8a8a5205d222950dc8e9245549a48894b864a/recipes/cmake-ide";
@@ -8801,8 +8843,8 @@
         src = fetchFromGitHub {
           owner = "Kitware";
           repo = "CMake";
-          rev = "92cd3d06772ada13935790d66927ab4663c7d628";
-          sha256 = "03f04yn0gphcd4664w73pdpmq46ljkvxbv7xyg5s084j5mk263hx";
+          rev = "0465d3c204e8cc7c677dd6a34d3ea884bc5e7954";
+          sha256 = "08xv33w6ai51zfsqh73cfcyc6b2dalqqpgavqh4gxp7g34zncg5h";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/598723893ae4bc2e60f527a072efe6ed9d4e2488/recipes/cmake-mode";
@@ -9242,8 +9284,8 @@
         src = fetchFromGitHub {
           owner = "purcell";
           repo = "color-theme-sanityinc-solarized";
-          rev = "74a7065808f82dbdd9638ae33ed0e4f7a55da35c";
-          sha256 = "1af6j8qyzcm4x5p2wkhfh6f62n5i4fapjfrii3rl3l9im39fl8jc";
+          rev = "6dd1d67a8e88a7bd586572cabe519b99a90fc3ee";
+          sha256 = "08bxyrpx7shgzgnmklshgdfa457imdmn5rv4j3pyp8pfwf0zg9h5";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/cae2ac3513e371a256be0f1a7468e38e686c2487/recipes/color-theme-sanityinc-solarized";
@@ -9259,12 +9301,12 @@
     color-theme-sanityinc-tomorrow = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "color-theme-sanityinc-tomorrow";
-        version = "20180122.1154";
+        version = "20180210.2104";
         src = fetchFromGitHub {
           owner = "purcell";
           repo = "color-theme-sanityinc-tomorrow";
-          rev = "0358ee25ba27741a41c62414785308b417cdc308";
-          sha256 = "1dqssw407f9d4bbaks9k921fzcs2fz7ccbwpcm22ly46krlzxfpi";
+          rev = "17bfc80dec721914299b50ef48ce47a5c18bb6b0";
+          sha256 = "1jlkpp027xfsgyw5kw9wigwxrlgihj01x76rpp2mly9pghggx6mb";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/cae2ac3513e371a256be0f1a7468e38e686c2487/recipes/color-theme-sanityinc-tomorrow";
@@ -9553,12 +9595,12 @@
     company = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "company";
-        version = "20180123.1315";
+        version = "20180211.1604";
         src = fetchFromGitHub {
           owner = "company-mode";
           repo = "company-mode";
-          rev = "d789f2643c11f7c53fc47ed9d9b271bb6f6718a3";
-          sha256 = "0kqpjxbv9gfkki5cz78dslfgwwf2n15y32dq059lmbfm4mg9f5n4";
+          rev = "38ef92d6273113c2b3d2a302129ad37a30f98998";
+          sha256 = "0l9hhflmirv1a0znjsg6ysvrsg270pwnkmhakihhqy39fgv3qdfa";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/96e7b4184497d0d0db532947f2801398b72432e4/recipes/company";
@@ -9668,13 +9710,13 @@
         pname = "company-axiom";
         version = "20171024.1310";
         src = fetchgit {
-          url = "https://bitbucket.org/pdo/axiom-environment.git";
+          url = "https://bitbucket.org/pdo/axiom-environment";
           rev = "b4f0fa9cd013e107d2af8e2ebedff8a7f40be7b5";
           sha256 = "0p2mg2824mw8l1zrfq5va1mnxg0ib5f960306vvsm6b3pi1w5kv0";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/9f07feb8686c76c330f282320b9f653dc16cadd5/recipes/company-axiom";
-          sha256 = "1qjy2idyfwa1a4z1v05ky26dzq8hs6aaszq4bifd7vymasvnamml";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/8b4c6b03c5ff78ce327dcf66b175e266bbc53dbf/recipes/company-axiom";
+          sha256 = "061n8zn11r5a9m96sqnw8kx252n1m401cmcyqla8n9valjbnvsag";
           name = "company-axiom";
         };
         packageRequires = [ axiom-environment company emacs ];
@@ -9746,22 +9788,22 @@
           license = lib.licenses.free;
         };
       }) {};
-    company-childframe = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    company-childframe = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, posframe }:
     melpaBuild {
         pname = "company-childframe";
-        version = "20180124.1744";
+        version = "20180205.2236";
         src = fetchFromGitHub {
           owner = "tumashu";
           repo = "company-childframe";
-          rev = "bb3d778bb12d47c7f2311eecb17985a5695acd31";
-          sha256 = "1b1xyy0f20ls7v695vg6m5g0vb3pn7v7vdbsziarf2jaqgc8ps57";
+          rev = "fb799c3c8f8099a0ec7d21beb3b90136704c741e";
+          sha256 = "121qqb797vfpfxxkk0gvh5x4p03lb6aarjfydl88ah6rw5087dij";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/4fda072eb1e3f4feb9ad9834104f748f5b749a0d/recipes/company-childframe";
           sha256 = "1l8bd9fnw49apvwjgrlfywascbczavpaxns2ydymmb6ksj00rvzy";
           name = "company-childframe";
         };
-        packageRequires = [ company emacs ];
+        packageRequires = [ company emacs posframe ];
         meta = {
           homepage = "https://melpa.org/#/company-childframe";
           license = lib.licenses.free;
@@ -9970,8 +10012,8 @@
         src = fetchFromGitHub {
           owner = "PythonNut";
           repo = "company-flx";
-          rev = "05efcafb488f587bb6e60923078d97227462eb68";
-          sha256 = "12cg8amyk1pg1d2n8fb0mmls14jzwx08hq6s6g7wyd9s7y96hkhb";
+          rev = "16ca0d2f84e8e768bf2db8c5cfe421230a00bded";
+          sha256 = "09zaaqi8587n1fv5pxnrdmdll319s8f66xkc41p51gcs2p7qa5w1";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/f27d718ee67f8c91b208a35adbbcdac67bbb89ce/recipes/company-flx";
@@ -10176,12 +10218,12 @@
     company-lsp = callPackage ({ company, dash, emacs, fetchFromGitHub, fetchurl, lib, lsp-mode, melpaBuild, s }:
     melpaBuild {
         pname = "company-lsp";
-        version = "20180122.1747";
+        version = "20180211.2052";
         src = fetchFromGitHub {
           owner = "tigersoldier";
           repo = "company-lsp";
-          rev = "0f750d4cbde7063472b1f25b7cef7e632ae307cb";
-          sha256 = "1xszd359y7f93azf1b8805v4s99ql4hfajbz9nzwkb5py1jqxxn0";
+          rev = "b58c8c4cbfb0e01ee9020f09dfd25cfadda58cc1";
+          sha256 = "1fs92qd0ni7bwbbccyjycrklcdb1nwms6yabfwr37aizkbrg28lw";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/5125f53307c1af3d9ccf2bae3c25e7d23dfe1932/recipes/company-lsp";
@@ -10306,8 +10348,8 @@
         src = fetchFromGitHub {
           owner = "xcwen";
           repo = "ac-php";
-          rev = "1ad972b0394f0ecbfebae8041af96a1fe2e24cf0";
-          sha256 = "07hljgfl1d6dg50dflr467fdif39xxp0jap46x85gilrlw458hp6";
+          rev = "cf9db85af2db9150e9d9b4fecad874e16ce43f0d";
+          sha256 = "0gm15f5l91sh7syf60lnvlfnf3vivbk36gddsf3yndiwfsqh7xd0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/ac283f1b65c3ba6278e9d3236e5a19734e42b123/recipes/company-php";
@@ -10459,8 +10501,8 @@
         src = fetchFromGitHub {
           owner = "Andersbakken";
           repo = "rtags";
-          rev = "53e74892e8bd15baa4d1bd1d640dcabcba9667ee";
-          sha256 = "0ynhx1cyxvrmkadb8h81xrhxvf9wssq74xk236dhl7q1mqagnjaf";
+          rev = "2b0c88cc470b06b65232c23df4b6fbfc4b534580";
+          sha256 = "047w0khlcawwr9rz7ss52x9jzam4pdqd1cwgx7nqiyv3cd47xfsy";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/company-rtags";
@@ -10494,6 +10536,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    company-solidity = callPackage ({ cl-lib ? null, company, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "company-solidity";
+        version = "20180206.821";
+        src = fetchFromGitHub {
+          owner = "ssmolkin1";
+          repo = "company-solidity";
+          rev = "0687c09671403888b88e27d58e70f1bc969d1425";
+          sha256 = "1clxzxyvnnf6mvadlqslbn7is7g2b625mnb4c5k7iyflc081wpz2";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/ef246601ff6d92d6dfcd809f637e50d9838da0b8/recipes/company-solidity";
+          sha256 = "076z5jqh486k2lkh9rgbhs71bws4fba68pjybr9yyf0sdc5m7kc6";
+          name = "company-solidity";
+        };
+        packageRequires = [ cl-lib company ];
+        meta = {
+          homepage = "https://melpa.org/#/company-solidity";
+          license = lib.licenses.free;
+        };
+      }) {};
     company-sourcekit = callPackage ({ company, dash, dash-functional, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, sourcekit }:
     melpaBuild {
         pname = "company-sourcekit";
@@ -10560,12 +10623,12 @@
     company-terraform = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, terraform-mode }:
     melpaBuild {
         pname = "company-terraform";
-        version = "20171215.546";
+        version = "20180131.1503";
         src = fetchFromGitHub {
           owner = "rafalcieslak";
           repo = "emacs-company-terraform";
-          rev = "1730e03aec5e67b751f50469c978e83326eae7f3";
-          sha256 = "0ha98424vzb4sx03l88mc1mspjl9h5aypkj3jqyla7sxga8a3ifa";
+          rev = "74dad245567e06e758e1112c0d75f3eccf48e32c";
+          sha256 = "0y4giv3i947258j5pv6wpzk95zry8sn8ra66m1237lk0k9zhpfdf";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/1d9732da975dcf59d3b311b19e20abbb29c33656/recipes/company-terraform";
@@ -10648,8 +10711,8 @@
         src = fetchFromGitHub {
           owner = "abingham";
           repo = "emacs-ycmd";
-          rev = "7f394d02f6f3149b215adcc96043c78d5f32d612";
-          sha256 = "0q7y0cg2gw15sm0yi45gc81bsrybv8w8z58vjlq1qp0nxpcz3ipl";
+          rev = "e21c99de8fd2992031adaa758df0d495e55d682a";
+          sha256 = "1l9xsqlcqi25mdka806gz3h4y4x0dh00n6bajh3x908ayixjgf91";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/company-ycmd";
@@ -10875,12 +10938,12 @@
     contextual-menubar = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "contextual-menubar";
-        version = "20170908.408";
+        version = "20180204.2309";
         src = fetchFromGitHub {
           owner = "aaronjensen";
           repo = "contextual-menubar";
-          rev = "67ddb1c8eec62e2b26524c09585a4f25f03ebb11";
-          sha256 = "06rfkv7q9brahjgaqvpixqb26v4a65hyphl7ymjx8qyyypzrzac5";
+          rev = "f76f55232ac07df76ef9a334a0c527dfab97c40b";
+          sha256 = "0zks4w99nbhz1xvr67isgg6yjghpzbh5s5wd839zi0ly30x4riqf";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/cba21d98f3abbf1f45d1fdd9164d4660b7d3e368/recipes/contextual-menubar";
@@ -11085,12 +11148,12 @@
     counsel = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, swiper }:
     melpaBuild {
         pname = "counsel";
-        version = "20180114.1336";
+        version = "20180211.1029";
         src = fetchFromGitHub {
           owner = "abo-abo";
           repo = "swiper";
-          rev = "ffc34c666c2b214d01e3f722249f45d1672566bb";
-          sha256 = "0gzf8l0clh2p86m6xcygykskhigr43cpwfvj1sl06mcq600fxavn";
+          rev = "cc5197d5de78ba981df54815c8615d795e0ffdc5";
+          sha256 = "0c8866mb2ca419b6zh153vp298dxwldj29lbrynwr1jlpjf1dbr5";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/06c50f32b8d603db0d70e77907e36862cd66b811/recipes/counsel";
@@ -11232,12 +11295,12 @@
     counsel-projectile = callPackage ({ counsel, fetchFromGitHub, fetchurl, lib, melpaBuild, projectile }:
     melpaBuild {
         pname = "counsel-projectile";
-        version = "20180105.632";
+        version = "20180204.1147";
         src = fetchFromGitHub {
           owner = "ericdanan";
           repo = "counsel-projectile";
-          rev = "4d78ae8c90e8ebb903b8e70442989a69e46ff069";
-          sha256 = "0s81jrmfql3cjh0bf6vfk3gpb94xqcpbkvjah11j0d0ijgw4y1dg";
+          rev = "1c1e7eff065e1660981428ef326185c404488705";
+          sha256 = "18b66rv73y6gx0hhjjfixywj0ig41rxb4k4ngpxap56cy7b8kfj9";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/389f16f886a385b02f466540f042a16eea8ba792/recipes/counsel-projectile";
@@ -11484,12 +11547,12 @@
     cquery = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, lsp-mode, melpaBuild }:
     melpaBuild {
         pname = "cquery";
-        version = "20180129.1017";
+        version = "20180204.912";
         src = fetchFromGitHub {
           owner = "cquery-project";
           repo = "emacs-cquery";
-          rev = "275bf669d14bfcbd342833c245fa9129c5ff76a1";
-          sha256 = "0rm0m35sqwas9ayx8lvq19g04y3ndnhfgl7mpfmmjqab9pcqdrjn";
+          rev = "e3ce2127f9937eb0a7b7a22e81f205ff150f4ecd";
+          sha256 = "1p3idygppqi5xgbjq9pr5pqpm4isw1cb8qq8szf5mb6ypq2dlszm";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3cd3bffff0d2564c39735f844f9a02a660272caa/recipes/cquery";
@@ -11803,8 +11866,8 @@
         src = fetchFromGitHub {
           owner = "kkweon";
           repo = "emacs-css-autoprefixer";
-          rev = "2b18f38978845a18c66218e1abf0db789137073f";
-          sha256 = "00y3ip6n0w9w6cyfrf3xqlrx2gqzq3b61n8c0bgjlvw85drjz2pd";
+          rev = "a694e7e725074da99d90b18dd166707f1649bfae";
+          sha256 = "0cd4i9xbc7rqsmaa73gj4p9za3g6x6xv54ngnkf6vprpg3g7lb6n";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/122e3813a5b8a57303345e9cd855f4d85eced6f0/recipes/css-autoprefixer";
@@ -11992,8 +12055,8 @@
         src = fetchFromGitHub {
           owner = "mortberg";
           repo = "cubicaltt";
-          rev = "682e9f66ce16daf166549c1a16dd3a110894a8ea";
-          sha256 = "1mz3m4cs7bm8di8lgi7clkl2fjy4663ir54l32f8l73wjic6c90a";
+          rev = "84053d1c023721706ac5cbecf152e2cc71080518";
+          sha256 = "1v5ya14ayj719x98swbrv7spsa5rzcxzzh1k18fpal7mqmzvy6jz";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/1be42b49c206fc4f0df6fb50fed80b3d9b76710b/recipes/cubicaltt";
@@ -12244,8 +12307,8 @@
         src = fetchFromGitHub {
           owner = "cython";
           repo = "cython";
-          rev = "eb17d235aade6e338841bf4e53108e1a7c832190";
-          sha256 = "1rf73qcyxf48pfxdrnr2bhqy8k5zj001dhixmg1d35z28cwx975n";
+          rev = "829d7bbef5173771bcf9ffdf2e7e30e96f98e99e";
+          sha256 = "10671yczbixg90x5c8rgd838w5la21x9jqdm03vcrz03i2ccjs99";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/be9bfabe3f79153cb859efc7c3051db244a63879/recipes/cython-mode";
@@ -12405,22 +12468,22 @@
           license = lib.licenses.free;
         };
       }) {};
-    dante = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, flycheck, haskell-mode, lib, melpaBuild, s }:
+    dante = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, flycheck, haskell-mode, lcr, lib, melpaBuild, s }:
     melpaBuild {
         pname = "dante";
-        version = "20180125.116";
+        version = "20180202.48";
         src = fetchFromGitHub {
           owner = "jyp";
           repo = "dante";
-          rev = "5fb1765fcf5ac896c8d439d7f2d4030672e7509c";
-          sha256 = "11nj1x9yxdkwvpsz7lkc9msgnkbzkrcw088nfryic9398mnrrccf";
+          rev = "c1c9bde9a83a87c46731466af56cd31262d057fa";
+          sha256 = "01krdh3cz2ddhlhpyc072izm4y29qbpjkmwj0fq4vi5hcqzbalsk";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/5afa8226077cbda4b76f52734cf8e0b745ab88e8/recipes/dante";
           sha256 = "1j0qwjshh2227k63vd06bvrsccymqssx26yfzams1xf7bp6y0krs";
           name = "dante";
         };
-        packageRequires = [ dash emacs f flycheck haskell-mode s ];
+        packageRequires = [ dash emacs f flycheck haskell-mode lcr s ];
         meta = {
           homepage = "https://melpa.org/#/dante";
           license = lib.licenses.free;
@@ -12639,12 +12702,12 @@
     dash = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "dash";
-        version = "20180118.743";
+        version = "20180206.2124";
         src = fetchFromGitHub {
           owner = "magnars";
           repo = "dash.el";
-          rev = "c1991d4c22f356be21df6b3badd7233a94df7937";
-          sha256 = "14d4jlsymqsggdw12drf1qi7kwad9f43iswkyccr3jwg51ax00r7";
+          rev = "48a5015dd1314a8bcad48f2ad8866dd911001b01";
+          sha256 = "0cs8l20fw34ilr7qir1p708wx925d3qkp7g4py2s2d8k1yf0kjmy";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/57eed8767c3e98614259c408dc0b5c54d3473883/recipes/dash";
@@ -12685,8 +12748,8 @@
         src = fetchFromGitHub {
           owner = "magnars";
           repo = "dash.el";
-          rev = "c1991d4c22f356be21df6b3badd7233a94df7937";
-          sha256 = "14d4jlsymqsggdw12drf1qi7kwad9f43iswkyccr3jwg51ax00r7";
+          rev = "48a5015dd1314a8bcad48f2ad8866dd911001b01";
+          sha256 = "0cs8l20fw34ilr7qir1p708wx925d3qkp7g4py2s2d8k1yf0kjmy";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/57eed8767c3e98614259c408dc0b5c54d3473883/recipes/dash-functional";
@@ -12762,22 +12825,22 @@
           license = lib.licenses.free;
         };
       }) {};
-    datetime = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    datetime = callPackage ({ emacs, extmap, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "datetime";
-        version = "20180118.837";
+        version = "20180205.1445";
         src = fetchFromGitHub {
           owner = "doublep";
           repo = "datetime";
-          rev = "d99e56785d750d6c7e416955f047fe057fae54a6";
-          sha256 = "0s2pmj2wpprmdx1mppbch8i1srwhfl2pzyhsmczan75wmiblpqfj";
+          rev = "2a92d80cdc7febf620cd184cf1204a68985d0e8b";
+          sha256 = "0lzdgnmvkvap5j8hvn6pidfnc2ax317sj5r6b2nahllhh53mlr4j";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/fff9f0748b0ef76130b24e85ed109325256f956e/recipes/datetime";
-          sha256 = "0mnkckibymc5dswmzd1glggna2fspk06ld71m7aaz6j78nfrm850";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/91ef4352603cc69930ab3d63f0a90eee63f5f328/recipes/datetime";
+          sha256 = "0c000fnqg936dhjw5qij4lydzllw1x1jgnyy960zh6r61pk062xj";
           name = "datetime";
         };
-        packageRequires = [ emacs ];
+        packageRequires = [ emacs extmap ];
         meta = {
           homepage = "https://melpa.org/#/datetime";
           license = lib.licenses.free;
@@ -13357,8 +13420,8 @@
         src = fetchFromGitHub {
           owner = "cqql";
           repo = "dictcc.el";
-          rev = "a77cf1fadadcbde762466970b503c8a8916b35b2";
-          sha256 = "0aaah14nc8ajqhbjmwp7257k2n8ay6g87spb734kxfs8irzg52fa";
+          rev = "7b988413f7719820cd846827525142a23f401e50";
+          sha256 = "0fiv0qgpqwp6ccakr1wh713pm2ylyvl2i54557fym80zgi9iff96";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/5e867df96915a0c4f22fdccd4e2096878895bda6/recipes/dictcc";
@@ -13395,12 +13458,12 @@
     diff-hl = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "diff-hl";
-        version = "20180123.1420";
+        version = "20180201.355";
         src = fetchFromGitHub {
           owner = "dgutov";
           repo = "diff-hl";
-          rev = "9ef21e4ea2389545417741e20a89d92bfd72d6ff";
-          sha256 = "0fj4yjmvfbzqrcmngfbszvr1i8i17ap4lb99idyc9drgiq53xdw1";
+          rev = "190622d3fa2c3237529ec073a8fa00aee06023a1";
+          sha256 = "0jh270anr2ralixgwsc3wn48jnw3qwz6m18lg0sgwgzyajh0fpb9";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/diff-hl";
@@ -13583,12 +13646,12 @@
     dimmer = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "dimmer";
-        version = "20180124.1822";
+        version = "20180210.1348";
         src = fetchFromGitHub {
           owner = "gonewest818";
           repo = "dimmer.el";
-          rev = "7dd76eb41f5684928365b28301412e8aff7235a9";
-          sha256 = "14gf6z1pgy8rkxb2777yc7ng94y0yf3rppq3gfb98xfcl09ff06n";
+          rev = "263d330d8f9e99c9c3d3235fe6cf90ecaca90e7c";
+          sha256 = "1dg5pf54w9479br40i0b66y86xdn1xj99iq7rmagzva908q5rpyy";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/8ae80e9202d69ed3214325dd15c4b2f114263954/recipes/dimmer";
@@ -14171,12 +14234,12 @@
     diredfl = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "diredfl";
-        version = "20171014.1402";
+        version = "20180210.1814";
         src = fetchFromGitHub {
           owner = "purcell";
           repo = "diredfl";
-          rev = "085eabf2e70590ec8e31c1e66931d652d8eab432";
-          sha256 = "19gjs90ai6fv4q7rhssrgc45d9g4frg680p1jgmbxzrd9jdy013w";
+          rev = "9b2a89951cee8bdf5c0cb67f9c3ad6ac73abf9cb";
+          sha256 = "0x4qhxysmcwllkbia6xkfmlpddxhfxxvawywp57zs8c00193nn1z";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3da86e18d423198766455929da1dcb3a9a3be381/recipes/diredfl";
@@ -15102,12 +15165,12 @@
     doom-themes = callPackage ({ all-the-icons, cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "doom-themes";
-        version = "20180128.2355";
+        version = "20180205.1204";
         src = fetchFromGitHub {
           owner = "hlissner";
           repo = "emacs-doom-themes";
-          rev = "f7c05d390fa733ec7998025d407608fe9f67c111";
-          sha256 = "18c3347n3x327qnpd0ab8j74zqs4yb5rn6gz0x2y8kknzzn4h76q";
+          rev = "d84a0172202243f4fe0ae5738d7ea9b1eb2d38c6";
+          sha256 = "0za6cq7wr7zpqjq5g6ac7zqnzq544s0zkkhsc0djcwc2x67vr95g";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/c5084bc2c3fe378af6ff39d65e40649c6359b7b5/recipes/doom-themes";
@@ -15144,12 +15207,12 @@
     dotenv-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "dotenv-mode";
-        version = "20171123.649";
+        version = "20180207.1114";
         src = fetchFromGitHub {
           owner = "preetpalS";
           repo = "emacs-dotenv-mode";
-          rev = "8d45b98beb04f486eb13d71765589e7dccb8ffa9";
-          sha256 = "00hm097m1jn3pb6k3r2jhkhn1zaf6skcwv1v4dxlvdx8by1md49q";
+          rev = "f4c52bcd5313379b9f2460db7f7a33119dfa96ea";
+          sha256 = "1fplkhxnsgdrg10iqsmw162zny2idz4vvv35spsb9j0hsk8imclc";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9fc022c54b90933e70dcedb6a85167c2d9d7ba79/recipes/dotenv-mode";
@@ -15522,12 +15585,12 @@
     dtrt-indent = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "dtrt-indent";
-        version = "20171001.1233";
+        version = "20180211.946";
         src = fetchFromGitHub {
           owner = "jscheid";
           repo = "dtrt-indent";
-          rev = "7fd55af3b0311ea24b68397054e705c835fa5ef1";
-          sha256 = "1sgmd1zqdwa1f6y8d6vaacyipkqn2ivvaim1xndbkihgmhyn4kf0";
+          rev = "34f2e23de514deeb61888557e66ccc9790ff8eed";
+          sha256 = "09fjr4m5cxgfdxpnrlc7hdvckz0l0lrx1vyglb7kwyyacyp1vdly";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/61bcbcfa6c0f38a1d87f5b6913b8be6c50ef2994/recipes/dtrt-indent";
@@ -15983,12 +16046,12 @@
     eacl = callPackage ({ emacs, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild }:
     melpaBuild {
         pname = "eacl";
-        version = "20171109.40";
+        version = "20180204.1911";
         src = fetchFromGitHub {
           owner = "redguardtoo";
           repo = "eacl";
-          rev = "0ee57b495036b6c1b54d668e84be373f8a1c8d9a";
-          sha256 = "1fizb09g0dc9rzlj34n26vi12h3gk4mn96iyrsa60in5c9yn9f04";
+          rev = "ec601f3a8da331dd0a9e7a93d40ae3925bd06700";
+          sha256 = "1kgayh2q97rxzds5ba1zc9ah08kbah9lqbwhmb7pxxgvgx9yfagg";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/8223bec7eed97f0bad300af9caa4c8207322d39a/recipes/eacl";
@@ -16050,8 +16113,8 @@
         src = fetchFromGitHub {
           owner = "masasam";
           repo = "emacs-easy-hugo";
-          rev = "62a79c5d359674c95719dd129260e4e1f6e760bd";
-          sha256 = "084a99klm1lpjvsfls1m2zgwrh4wbwwj4fw7xb84qw5fzzy32ba1";
+          rev = "abf4dfcddacfc90ee39aad3c9e2e4615fb74c6a1";
+          sha256 = "1kxkqpf0xq6w1g8qvy32hjqy42mz17c36wrkqqwdbxhbq7d5ckyw";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/easy-hugo";
@@ -16071,8 +16134,8 @@
         src = fetchFromGitHub {
           owner = "masasam";
           repo = "emacs-easy-jekyll";
-          rev = "9a66d5c5dddac7d5b924df0c3bb414d3f797d8a5";
-          sha256 = "0qx6lgpg2szjgy1a3a856klm7vh544braq8v2s7f81lq0ks2bjhj";
+          rev = "b3176d34f1e2850ab96795e264da6e05e23e280b";
+          sha256 = "175by3aswpd00lhin69f2jkb1aqi487vzk3qa6wqp41hjpga6fag";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/c3f281145bad12c27bdbef32ccc07b6a5f13b577/recipes/easy-jekyll";
@@ -16193,12 +16256,12 @@
     ebib = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, parsebib, seq }:
     melpaBuild {
         pname = "ebib";
-        version = "20180111.30";
+        version = "20180204.1402";
         src = fetchFromGitHub {
           owner = "joostkremers";
           repo = "ebib";
-          rev = "8c4735fbd7864a8420a16378ac2240fa60af5332";
-          sha256 = "0g6prr8512dkr4mizqy1jkqc60w88i7kcx1lbarqi2mfkqdhhvg6";
+          rev = "7212edd2f54f2e289230b8d884dfcb3155c65fcc";
+          sha256 = "11fmi0pxx83qmhh62ilc6i2icrl7x8pj34rrkxlc5plyph8cczjd";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/4e39cd8e8b4f61c04fa967def6a653bb22f45f5b/recipes/ebib";
@@ -16655,12 +16718,12 @@
     editorconfig = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "editorconfig";
-        version = "20171208.2036";
+        version = "20180211.2028";
         src = fetchFromGitHub {
           owner = "editorconfig";
           repo = "editorconfig-emacs";
-          rev = "15e26cf5a5a656735fa25bfa75164f0893f4688a";
-          sha256 = "0fyncdkxvlbsr4lv686djy2a1wm5qpcnjrkc3zdsbrr6wq8ildgh";
+          rev = "f52d2133f3948221ba84a396c693eff958fc0eb9";
+          sha256 = "1ml9hgsyndzn03bz4a81yhalfg34mk5il56kqv4bhqkwjkl1axm7";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/50d4f2ed288ef38153a7eab44c036e4f075b51d0/recipes/editorconfig";
@@ -16856,8 +16919,8 @@
         src = fetchFromGitHub {
           owner = "egisatoshi";
           repo = "egison3";
-          rev = "5eeb1b8c8d8e2f394724700f930c9063b9fd279d";
-          sha256 = "1kx574bqjsgcri40qhkw8p2rg0rvcbwhbrmiyd5znprk5pz5x1ps";
+          rev = "bbcd5d93f3cd61b593c4d565a374ccc8bafa9020";
+          sha256 = "19am1hmi3gjpwqmjnlsqdnvwr225y212lr9ff37jkyhdfny71lnr";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/f543dd136e2af6c36b12073ea75b3c4d4bc79769/recipes/egison-mode";
@@ -17004,30 +17067,22 @@
           license = lib.licenses.free;
         };
       }) {};
-    ejc-sql = callPackage ({ auto-complete, cider, clomacs, dash, direx, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, spinner }:
+    ejc-sql = callPackage ({ auto-complete, clomacs, dash, direx, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, spinner }:
     melpaBuild {
         pname = "ejc-sql";
-        version = "20171227.259";
+        version = "20180212.55";
         src = fetchFromGitHub {
           owner = "kostafey";
           repo = "ejc-sql";
-          rev = "afb3e6f1e82abec5407c7a3335bf1c70fa3690d6";
-          sha256 = "0q8c35jnxgxmbbbpz4iv3x45ylckq4qi0pq05am5rf5rywlw00v1";
+          rev = "0981cdf3ecef13a6be1d15bfad303d71ba85e625";
+          sha256 = "105y6rfyfcdgzc0xi3dy7y919dm51330sbg2acfpgsqkmiwpp6j7";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/8f2cd74717269ef7f10362077a91546723a72104/recipes/ejc-sql";
           sha256 = "0v9mmwc2gm58nky81q7fibj93zi7zbxq1jzjw55dg6cb6qb87vnx";
           name = "ejc-sql";
         };
-        packageRequires = [
-          auto-complete
-          cider
-          clomacs
-          dash
-          direx
-          emacs
-          spinner
-        ];
+        packageRequires = [ auto-complete clomacs dash direx emacs spinner ];
         meta = {
           homepage = "https://melpa.org/#/ejc-sql";
           license = lib.licenses.free;
@@ -17061,8 +17116,8 @@
         src = fetchFromGitHub {
           owner = "dimitri";
           repo = "el-get";
-          rev = "67dcb92c972f67f81c0667ee95d97f05eaa1907b";
-          sha256 = "0yhcpcp22n4mj8yq2m9p020mzcmjcv3fb1vw7bnbz8qc42g58xai";
+          rev = "63fa39d86deba5d03ac8f7f9a103e94d6c80739d";
+          sha256 = "15jxnkvgk700qi79d8jj96ss2mb7yfsgzhi0mama4dp5gancps27";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/1c61197a2b616d6d3c6b652248cb166196846b44/recipes/el-get";
@@ -17330,12 +17385,12 @@
     elbank = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, seq }:
     melpaBuild {
         pname = "elbank";
-        version = "20180125.823";
+        version = "20180206.701";
         src = fetchFromGitHub {
           owner = "NicolasPetton";
           repo = "Elbank";
-          rev = "0b39f801ff614dd2cf36532ed12327138ac36682";
-          sha256 = "1yk9mbjcw13lh8cwmwwq6i9ma5hrv7aiqwfsj0rn4x9vygsxwhgi";
+          rev = "817047305e9db1260956ae5ac6b60c9027868895";
+          sha256 = "0i5nqfjm69kbvnkvrcvfv8gbz0608cldmi3zwq2vpld7p35d5d26";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/05d252ee84adae2adc88fd325540f76b6cdaf010/recipes/elbank";
@@ -17348,19 +17403,40 @@
           license = lib.licenses.free;
         };
       }) {};
+    elcontext = callPackage ({ emacs, f, fetchFromGitHub, fetchurl, ht, hydra, lib, melpaBuild, osx-location, uuidgen }:
+    melpaBuild {
+        pname = "elcontext";
+        version = "20180204.138";
+        src = fetchFromGitHub {
+          owner = "rollacaster";
+          repo = "elcontext";
+          rev = "c223476b62a55b80f6b85b2e016d3ec0d7ec9875";
+          sha256 = "1ynwgr1g421liyfyfli2cgfdqx3gijm4z9hd0cmhndfwalrb1xq6";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/12bcb0bfc89c1f235e4ac5d7e308e41905725dc6/recipes/elcontext";
+          sha256 = "1firdsrag7r02qb3kjxc3j8l9psvh117z3qwycazhxdz82z0isw7";
+          name = "elcontext";
+        };
+        packageRequires = [ emacs f ht hydra osx-location uuidgen ];
+        meta = {
+          homepage = "https://melpa.org/#/elcontext";
+          license = lib.licenses.free;
+        };
+      }) {};
     elcord = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "elcord";
-        version = "20180125.659";
+        version = "20180203.1417";
         src = fetchFromGitHub {
-          owner = "Zulu-Inuoe";
+          owner = "Mstrodl";
           repo = "elcord";
-          rev = "8fe9c8cd6b5f32aab28fa4e12e3af2c113c7c0eb";
-          sha256 = "0ka732ij7ahrqx6xm6s7yncazlpw530ck9dxy06m2rax7gfm6l51";
+          rev = "a97824ead7c63fb114a9f34ed46a8401407fb4ea";
+          sha256 = "12mjmdr5kwmgpihnc943widbbw5pcp0gw1mcjf06v4lh0fpihk7h";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/36b64d0fead049df5ebd6606943a8f769324539e/recipes/elcord";
-          sha256 = "044mwil9alh2v7bjj8yvx8azym2b7a5xb0c7y0r0k2vj72wiirjb";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/cf2c52366a8f60b68a33a40ea92cc96e7f0933d2/recipes/elcord";
+          sha256 = "0a1f99mahaixx6j3lylc7w2zlq8f614m6xhd0x927afv3a6n50l6";
           name = "elcord";
         };
         packageRequires = [ emacs ];
@@ -17435,12 +17511,12 @@
     electric-operator = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, names }:
     melpaBuild {
         pname = "electric-operator";
-        version = "20180114.1000";
+        version = "20180204.1405";
         src = fetchFromGitHub {
           owner = "davidshepherd7";
           repo = "electric-operator";
-          rev = "63661980cef82a8032108f5ce14d5bd4f44d1255";
-          sha256 = "1wanfvhx3wv3iych0v93kaxapg86vzgbsd8l7r460s8l2nl5yybr";
+          rev = "478a976db3ea764f9c88c3302fb3bea1ab41f1ca";
+          sha256 = "08qzi8wvlf64xfhhndnmr9xksk3n9whzvjqaikf5kz1jrygncnrp";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/906cdf8647524bb76f644373cf8b65397d9053a5/recipes/electric-operator";
@@ -17589,12 +17665,12 @@
     elfeed-protocol = callPackage ({ cl-lib ? null, elfeed, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "elfeed-protocol";
-        version = "20171214.2319";
+        version = "20180204.2003";
         src = fetchFromGitHub {
           owner = "fasheng";
           repo = "elfeed-protocol";
-          rev = "97049eb980ce1cc2b871e4c7819133f1e4936a83";
-          sha256 = "1d2i3jg5a2wd7mb4xfdy3wbx12yigqq4ykj3zbcamvx59siip591";
+          rev = "e809a0f1c5b9713ec8d1932fa6412c57bc10150b";
+          sha256 = "0ly7g9a85r5vm8fr45km43vdl9jbzdqyiy9a7d95wx63p6aip7vs";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3f1eef8add7cd2cfefe6fad6d8e69d65696e9677/recipes/elfeed-protocol";
@@ -18072,12 +18148,12 @@
     elpy = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, find-file-in-project, highlight-indentation, lib, melpaBuild, pyvenv, s, yasnippet }:
     melpaBuild {
         pname = "elpy";
-        version = "20180119.54";
+        version = "20180210.1445";
         src = fetchFromGitHub {
           owner = "jorgenschaefer";
           repo = "elpy";
-          rev = "1fc5e18c3e26f085167201147f9fe2bfb6fd167a";
-          sha256 = "03a1nai4l7lk7kh196wvpxnmhqvmqv6jkqgkr9jqk326k2d5mwnp";
+          rev = "a86165de49f44013ba07d92d90f949a22ff9299a";
+          sha256 = "0b2qpsxrda2h2x82sqqqg7vqi6a1hx1jagri4al7sl9s74axdkr4";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/1d8fcd8745bb15402c9f3b6f4573ea151415237a/recipes/elpy";
@@ -18311,12 +18387,12 @@
     elx = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "elx";
-        version = "20180129.124";
+        version = "20180202.958";
         src = fetchFromGitHub {
           owner = "emacscollective";
           repo = "elx";
-          rev = "09bbb07688c0c14130c5e38837aa26b8d607829d";
-          sha256 = "0623fzyjjx08i98zmxpq4mcamr83jqj76nfn8ck0ql9k3bss1zlv";
+          rev = "99840665f3ffff36633d52b9970352fc523434a6";
+          sha256 = "0hfpbfvk2f20sy1gia77aw7ndyxpc268bk4n2n6zlfb4j9jcp2sf";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/57a2fb9524df3fdfdc54c403112e12bd70888b23/recipes/elx";
@@ -18416,12 +18492,12 @@
     emacsql = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "emacsql";
-        version = "20171218.1903";
+        version = "20180205.1835";
         src = fetchFromGitHub {
           owner = "skeeto";
           repo = "emacsql";
-          rev = "62d39157370219a1680265fa593f90ccd51457da";
-          sha256 = "0ghl3g8n8wlw8rnmgbivlrm99wcwn93bv8flyalzs0z9j7p7fdq9";
+          rev = "75ac0448a5965c82c616c862cab180c241110fd2";
+          sha256 = "0aplbc2c6rdkhzwg5b19xjrgijpdkhimaa4kah7mqqxdj7q1zfxh";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9cc47c05fb0d282531c9560252090586e9f6196e/recipes/emacsql";
@@ -18441,8 +18517,8 @@
         src = fetchFromGitHub {
           owner = "skeeto";
           repo = "emacsql";
-          rev = "62d39157370219a1680265fa593f90ccd51457da";
-          sha256 = "0ghl3g8n8wlw8rnmgbivlrm99wcwn93bv8flyalzs0z9j7p7fdq9";
+          rev = "75ac0448a5965c82c616c862cab180c241110fd2";
+          sha256 = "0aplbc2c6rdkhzwg5b19xjrgijpdkhimaa4kah7mqqxdj7q1zfxh";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9cc47c05fb0d282531c9560252090586e9f6196e/recipes/emacsql-mysql";
@@ -18462,8 +18538,8 @@
         src = fetchFromGitHub {
           owner = "skeeto";
           repo = "emacsql";
-          rev = "62d39157370219a1680265fa593f90ccd51457da";
-          sha256 = "0ghl3g8n8wlw8rnmgbivlrm99wcwn93bv8flyalzs0z9j7p7fdq9";
+          rev = "75ac0448a5965c82c616c862cab180c241110fd2";
+          sha256 = "0aplbc2c6rdkhzwg5b19xjrgijpdkhimaa4kah7mqqxdj7q1zfxh";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9cc47c05fb0d282531c9560252090586e9f6196e/recipes/emacsql-psql";
@@ -18483,8 +18559,8 @@
         src = fetchFromGitHub {
           owner = "skeeto";
           repo = "emacsql";
-          rev = "62d39157370219a1680265fa593f90ccd51457da";
-          sha256 = "0ghl3g8n8wlw8rnmgbivlrm99wcwn93bv8flyalzs0z9j7p7fdq9";
+          rev = "75ac0448a5965c82c616c862cab180c241110fd2";
+          sha256 = "0aplbc2c6rdkhzwg5b19xjrgijpdkhimaa4kah7mqqxdj7q1zfxh";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3cfa28c7314fa57fa9a3aaaadf9ef83f8ae541a9/recipes/emacsql-sqlite";
@@ -18793,12 +18869,12 @@
     emms-player-mpv = callPackage ({ emms, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "emms-player-mpv";
-        version = "20170628.303";
+        version = "20180210.310";
         src = fetchFromGitHub {
           owner = "dochang";
           repo = "emms-player-mpv";
-          rev = "8c72282c98f9b10601e9a6901277040cda4b33aa";
-          sha256 = "1h37kqhsi1x5xgxfp1i72vfdx5c2klblzmphf6mih3fvw3pcyxi6";
+          rev = "6d526fe618c3cebf7fbc5f0d3f0a225de16a76c7";
+          sha256 = "0jq67lngpz7iqwqfsl95r5p26cnnq7ldcj534nm86hwm6jfij564";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9679cb8d4b3b9dce1e0bff16647ea3f3e02c4189/recipes/emms-player-mpv";
@@ -19225,12 +19301,12 @@
     ensime = callPackage ({ company, dash, fetchFromGitHub, fetchurl, lib, melpaBuild, popup, s, sbt-mode, scala-mode, yasnippet }:
     melpaBuild {
         pname = "ensime";
-        version = "20171217.1730";
+        version = "20180201.1340";
         src = fetchFromGitHub {
           owner = "ensime";
           repo = "ensime-emacs";
-          rev = "3d3ab18436ad6089496b3bce1d49c64a86965431";
-          sha256 = "0p821zwpiznjh736af5avnx9abssx0zbb9xhs74yhh1mcdi1whq7";
+          rev = "2819a9c2ae2bc6d095887c2cbb6f9bd8617f1e52";
+          sha256 = "1cfr9xs268nwjjhx7n00h5sssm479bzd5f7c847hg6x2hyqkfzxb";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/502faab70af713f50dd8952be4f7a5131075e78e/recipes/ensime";
@@ -19359,12 +19435,12 @@
     epl = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "epl";
-        version = "20180127.351";
+        version = "20180205.1249";
         src = fetchFromGitHub {
           owner = "cask";
           repo = "epl";
-          rev = "28af1ab1217c46367ab5f29d72a57fcc6d9cd45e";
-          sha256 = "0hgqhzgbsi3gmnj0809mh1mqib4yrx16ibyn8j0h7v02dms4pk9q";
+          rev = "78ab7a85c08222cd15582a298a364774e3282ce6";
+          sha256 = "0ksilx9gzdazngxfni5i632jpb1nprcxplsbhgqirs2xdl53q8v8";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9c6cf24e86d8865bd2e4b405466118de1894851f/recipes/epl";
@@ -19547,12 +19623,12 @@
     erc-image = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "erc-image";
-        version = "20180118.739";
+        version = "20180206.941";
         src = fetchFromGitHub {
           owner = "kidd";
           repo = "erc-image.el";
-          rev = "0fcfe9283f75ec657d513c901c35cdbd48c8d2b5";
-          sha256 = "1byxpz6v272ilkbxf2br8qksczq7s7l1vjbcvwsii68r7s7lf1yl";
+          rev = "9f4d7b93a3c7e12ac935b50943177923a8c01d22";
+          sha256 = "0dd2v91rp3lai10258bszpd9wsa1lvx08xspsnijv64axh73yf7r";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/erc-image";
@@ -19908,8 +19984,8 @@
         src = fetchFromGitHub {
           owner = "erlang";
           repo = "otp";
-          rev = "fc6eb93ae081ac5ebf715e53d0d2519067fcea95";
-          sha256 = "07fizaia7pvq4fzjmw7461qn4mkl0346377mr2nqnva1h8r48mz7";
+          rev = "5e7286acceec0811fd95898c7337921ac91c97b4";
+          sha256 = "0ccynwiajdcb3h2xhb2y91kgf61pj9i3h3h4g4d6142j3mr4anl4";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/d9cd526f43981e0826af59cdc4bb702f644781d9/recipes/erlang";
@@ -19988,11 +20064,11 @@
     ert-junit = callPackage ({ ert ? null, fetchgit, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "ert-junit";
-        version = "20161018.1217";
+        version = "20180207.1348";
         src = fetchgit {
           url = "https://bitbucket.org/olanilsson/ert-junit";
-          rev = "c4cd27b60f9e7ccd05fd8a2097cde947eb250599";
-          sha256 = "0zm71kv4wxs6yf70qwrfavxc1845bg4aqqk36zypy17g1x40bms7";
+          rev = "45a359a94dbeb00838df5dbee15ad42e061af431";
+          sha256 = "05nwq8w7rczmn41bxz97sinn561rx8vb01dv0hsx0xllni7xwf59";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/27c627eacab54896a1363dbabc56250a65343dd8/recipes/ert-junit";
@@ -20533,12 +20609,12 @@
     ess = callPackage ({ fetchFromGitHub, fetchurl, julia-mode, lib, melpaBuild }:
     melpaBuild {
         pname = "ess";
-        version = "20180128.1545";
+        version = "20180211.1419";
         src = fetchFromGitHub {
           owner = "emacs-ess";
           repo = "ESS";
-          rev = "ec2c2f5649d01071ce9a7079072ef415f9426149";
-          sha256 = "0sp1q6wrv3q0w8rlhj390v2584mdwswznj0nyp42bf8qdb74ba87";
+          rev = "2622184dca12e76c856443251ee61066af5392ee";
+          sha256 = "0w7c7g8kxni5bgaxmmjp57z5di7r500yvvcpldr0n4cjx7qf9gjg";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/12997b9e2407d782b3d2fcd2843f7c8b22442c0a/recipes/ess";
@@ -20701,12 +20777,12 @@
     eterm-256color = callPackage ({ emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, xterm-color }:
     melpaBuild {
         pname = "eterm-256color";
-        version = "20171221.1837";
+        version = "20180202.1722";
         src = fetchFromGitHub {
           owner = "dieggsy";
           repo = "eterm-256color";
-          rev = "a5560abfa81242dc45ab0342e41e33f6c7e6bc1e";
-          sha256 = "0md53lhpxh1yqirfjgx8fq8vsh5zbl2v2hn63nkyh60rv3sc4jkm";
+          rev = "72b2d650a173c39648f1cb0f2b68fab5a6886d79";
+          sha256 = "15vj55l71v9yzl7cw4yw7lc71045xa3y6q0hn8a5pmakmb6fiwdf";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/e556383f7e18c0215111aa720d4653465e91eff6/recipes/eterm-256color";
@@ -21037,12 +21113,12 @@
     evil-collection = callPackage ({ emacs, evil, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "evil-collection";
-        version = "20180128.1213";
+        version = "20180202.1722";
         src = fetchFromGitHub {
           owner = "jojojames";
           repo = "evil-collection";
-          rev = "52462cb8bfc523f93e20aede2d1936c32fdf14b2";
-          sha256 = "0h01pa5zwh3jf7kfdl4vy5f8lcv147m1pcsmkmkg51qn520qr7f7";
+          rev = "f04fd5eef32728cb146d2dc5f3701b1d4733a2bf";
+          sha256 = "12magy7l325cfi25b8y8gd5b9n3smhn3w07mxb4nbp3rfg7nv2db";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/d7538c9eb00b6826867891b037e7aa537ac5b160/recipes/evil-collection";
@@ -21289,12 +21365,12 @@
     evil-goggles = callPackage ({ emacs, evil, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "evil-goggles";
-        version = "20180116.653";
+        version = "20180210.938";
         src = fetchFromGitHub {
           owner = "edkolev";
           repo = "evil-goggles";
-          rev = "a1a62d2b562b9fc2172868e3b172207948d84bbf";
-          sha256 = "1h999mqc84dfq2ysy2n0g2cbrqp2va41z2pdga54imfy899p7hmb";
+          rev = "deab4966d75321a9172947ee5cdf2329eb2c5a6b";
+          sha256 = "1b4w40x23kbzry80d4rxxynasmrkbry9jj5jkc4l4rcj8lk3vbbi";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/811b1261705b4c525e165fa9ee23ae191727a623/recipes/evil-goggles";
@@ -21520,12 +21596,12 @@
     evil-matchit = callPackage ({ evil, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "evil-matchit";
-        version = "20180129.401";
+        version = "20180131.502";
         src = fetchFromGitHub {
           owner = "redguardtoo";
           repo = "evil-matchit";
-          rev = "50bb88241983f0bf06d35a455a87c04eddc11c83";
-          sha256 = "1qn5nydh2pinjlyyplrdxrn2r828im6mgij95ahs8z14y9yxwcif";
+          rev = "20270ab6b0a3a398942609f7acc3d0162b954591";
+          sha256 = "0vnaplchyl1z9d8fhrc83157a6d97dgwdja4y0nm7bkgm1jqgbdc";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/aeab4a998bffbc784e8fb23927d348540baf9951/recipes/evil-matchit";
@@ -21923,8 +21999,8 @@
         src = fetchFromGitHub {
           owner = "ninrod";
           repo = "evil-string-inflection";
-          rev = "ac261bee68444c2cb9aaab25b58509e8f58efe35";
-          sha256 = "1b9h7qpmaqwcdj742y76hrs31l7z9aynih9mkwdcnx5fi2a649la";
+          rev = "f13a4aab75e5d50c0c63c126c4cbc0067d452d85";
+          sha256 = "1i4vc8iqyhswa77awczgqi1vqaxx8png5is1hwisxf0j9ydsgw4c";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/0720a0f5b775fcee8d1cfa0defe80048e2dd0972/recipes/evil-string-inflection";
@@ -22359,12 +22435,12 @@
     exotica-theme = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "exotica-theme";
-        version = "20180119.441";
+        version = "20180211.1557";
         src = fetchFromGitHub {
           owner = "jbharat";
           repo = "exotica-theme";
-          rev = "aca4fb0a6e460317ea1a04bdcb3e5175d30dc172";
-          sha256 = "14iwsd1dck3pfa6hh2griwd3y02b432wi2pkknckzp61s912iz0y";
+          rev = "e8e4fbb77008bbb50e6733571655e815cc30a5bf";
+          sha256 = "1igbis1784f2hs2cdva87nhzjfxaj6h14n2k07r4fy3igfd9qfa0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9182f92dd62e2f1775a76699a6c8f9c3e71e9030/recipes/exotica-theme";
@@ -22503,6 +22579,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    extmap = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "extmap";
+        version = "20180205.1047";
+        src = fetchFromGitHub {
+          owner = "doublep";
+          repo = "extmap";
+          rev = "3860b69fb19c962425d4e271ee0a24547b67d323";
+          sha256 = "1vjwinb7m9l2bw324v4m1g4mc9yqjs84bfjci93m0a1ih8n4zdbr";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/91ef4352603cc69930ab3d63f0a90eee63f5f328/recipes/extmap";
+          sha256 = "0c12gfd3480y4fc22ik02n7h85k6s70i5jv5i872h0yi68cgd01j";
+          name = "extmap";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/extmap";
+          license = lib.licenses.free;
+        };
+      }) {};
     exwm-surf = callPackage ({ emacs, exwm, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "exwm-surf";
@@ -22619,12 +22716,12 @@
     eziam-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "eziam-theme";
-        version = "20171007.939";
+        version = "20180208.628";
         src = fetchFromGitHub {
           owner = "thblt";
           repo = "eziam-theme-emacs";
-          rev = "909a84dc5959aac982d1c296e82d687d172d3ecd";
-          sha256 = "0mw9h55f708mv0ngixmdn7976yrhqjcnzac80f6mzddpwavgrhd6";
+          rev = "8891dc05b54c0ea848ee3bf7b42e759f73c1bb1a";
+          sha256 = "1wi1qqzf630ffz0kkk12f81jmm8ii7cckf1wds3phpb67msn5ial";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/4e0411583bd4fdbe425eb07de98851136fa1eeb0/recipes/eziam-theme";
@@ -22661,12 +22758,12 @@
     f3 = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild }:
     melpaBuild {
         pname = "f3";
-        version = "20180109.2042";
+        version = "20180130.358";
         src = fetchFromGitHub {
           owner = "cosmicexplorer";
           repo = "f3";
-          rev = "f896674c527f41fac8faea2ddeafb2757c7b9766";
-          sha256 = "0w605iw5p4z8jzvzq0608jpcp0hdk9x48w1rvqz9hmjncsi3af8s";
+          rev = "000009ce4adf7a57eae80512f29c4ec2a1391ce5";
+          sha256 = "0q3ylw0i1bg7pzsv4gj72jcfjjfh57vsb3fnfnhhh5i5vladiqsf";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/5b40de62a82d6895a37ff795d56f7d0f783461e6/recipes/f3";
@@ -22892,12 +22989,12 @@
     fasd = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "fasd";
-        version = "20161216.831";
+        version = "20180203.745";
         src = fetchFromGitHub {
           owner = "steckerhalter";
           repo = "emacs-fasd";
-          rev = "5940b84dfa1ea7225b740d3a8dd215290d964873";
-          sha256 = "1wqh7x0c1i0w5lfh0j7xilvp5vmwvbsblp2jd6bz3n5j2ydgpc00";
+          rev = "f6393895bddbe9a1c77d4f6963a7e7ec6ff18bc4";
+          sha256 = "1bjb20p2sp1avjmr57b3zf15w01fi7h4dd46zahhap1lrk9sxgx9";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/8f0fefb25f03677080c9adeeb48046d6ea163053/recipes/fasd";
@@ -22955,16 +23052,16 @@
     faust-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "faust-mode";
-        version = "20171122.414";
+        version = "20180205.126";
         src = fetchFromGitHub {
-          owner = "magnetophon";
+          owner = "rukano";
           repo = "emacs-faust-mode";
-          rev = "720fd8f5f48be27ceae3c6e3c612b39304484a03";
-          sha256 = "0v5i0z90zdbclr0sf17qm95b0hwn5lps253bah1lbfkpsvzxk4if";
+          rev = "7c31b22bdbfd2f8c16ec117d2975d56dd61ac15c";
+          sha256 = "0a3p69ay88da13cz2cqx00r3qs2swnn7vkcvchcqyrdybfjs7y4z";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/31f4177ce35313e0f40e9ef0e5a1043ecd181573/recipes/faust-mode";
-          sha256 = "1lfn4q1wcc3vzazv2yzcnpvnmq6bqcczq8lpkz7w8yj8i5kpjvsc";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/b362e7daeabd07c726ad9770d7d4941dfffd5b19/recipes/faust-mode";
+          sha256 = "0l8cbf5i6lv6i5vyqp6ngfmrm2y6z2070b8m10w4376kbbnr266z";
           name = "faust-mode";
         };
         packageRequires = [];
@@ -22983,8 +23080,8 @@
           sha256 = "0dj35hwkm5v8758c4ssl873vkvplba5apjsh7l23nsmnzdji99zg";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/d7a6fc9f99241ff8e3a9c1fb12418d4d69d9e203/recipes/faustine";
-          sha256 = "1hyvkd4y28smdp30bkky6bwmqwlxjrq136wp7112371w963iwjsb";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/8b4c6b03c5ff78ce327dcf66b175e266bbc53dbf/recipes/faustine";
+          sha256 = "1blmz993xrwkyr7snj7rm07s07imgpdlfqi6wxkm4ns6iwa2q60s";
           name = "faustine";
         };
         packageRequires = [ emacs faust-mode ];
@@ -23056,6 +23153,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    feebleline = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "feebleline";
+        version = "20180202.1420";
+        src = fetchFromGitHub {
+          owner = "tautologyclub";
+          repo = "feebleline";
+          rev = "c6a8a955c0f441d4b4663fabd5cecdc92235b74b";
+          sha256 = "09g67mkschca2vp73263xm5zf48831zfxlyyfcmkjpsvrgm83ii2";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/782295d8c530878bd0e20cde7e7f7f8f640953dd/recipes/feebleline";
+          sha256 = "0c604ahhv9c89r3hj7091zhhfpbykh4c23sn6ymqw4pp0dq4pgkj";
+          name = "feebleline";
+        };
+        packageRequires = [];
+        meta = {
+          homepage = "https://melpa.org/#/feebleline";
+          license = lib.licenses.free;
+        };
+      }) {};
     fetch = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "fetch";
@@ -23204,12 +23322,12 @@
     find-by-pinyin-dired = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, pinyinlib }:
     melpaBuild {
         pname = "find-by-pinyin-dired";
-        version = "20170206.208";
+        version = "20180209.1818";
         src = fetchFromGitHub {
           owner = "redguardtoo";
           repo = "find-by-pinyin-dired";
-          rev = "2c48434637bd63840fca4d2c6cf9ebd5dd44658f";
-          sha256 = "0ial0lbvg0xbrwn8cm68xc5wxj3xgp110y2zgypkdpak8gkv8b5h";
+          rev = "3b4781148dddc84a701ad76c0934ed991ecd59d5";
+          sha256 = "03fw1si115padxss6zb9fr0dsyq1bxlhxikgh4i5swp4jd4331k5";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/0aa68b4603bf4071d7d12b40de0138ecab1989d7/recipes/find-by-pinyin-dired";
@@ -23225,12 +23343,12 @@
     find-file-in-project = callPackage ({ emacs, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild }:
     melpaBuild {
         pname = "find-file-in-project";
-        version = "20180125.1859";
+        version = "20180201.2102";
         src = fetchFromGitHub {
           owner = "technomancy";
           repo = "find-file-in-project";
-          rev = "7be14de3c737e70606d208d8d443b89e58cd646d";
-          sha256 = "1sdnyqv69mipbgs9yax88m9b6crsa59rjhwrih197pifl4089awr";
+          rev = "cf20dda6050b11bee871b55f758716d8daa07b46";
+          sha256 = "0f4mkhdb56bnyp7wkg4bkv74rl51k4dxciv0zqf5x91lfzhz8jd0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/cae2ac3513e371a256be0f1a7468e38e686c2487/recipes/find-file-in-project";
@@ -23882,12 +24000,12 @@
     flow-minor-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "flow-minor-mode";
-        version = "20180104.1348";
+        version = "20180204.141";
         src = fetchFromGitHub {
           owner = "an-sh";
           repo = "flow-minor-mode";
-          rev = "50dded94ad201fdc9453656a8b15179981cd5acd";
-          sha256 = "1vaqml0ypbc14mnwycgm9slkds3bgg6x5qz99kck98acbcfijxk6";
+          rev = "9a90436f9208a8f4796ce0d5b08f9d1ba5dbbacf";
+          sha256 = "012q3rdzg5zrqwx5ywq07h8bzpvv0lnldkv4p1wxlr9yzxxhrv4a";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/66504f789069922ea56f268f4da90fac52b601ff/recipes/flow-minor-mode";
@@ -23987,12 +24105,12 @@
     flycheck = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, let-alist, lib, melpaBuild, pkg-info, seq }:
     melpaBuild {
         pname = "flycheck";
-        version = "20180123.1419";
+        version = "20180211.911";
         src = fetchFromGitHub {
           owner = "flycheck";
           repo = "flycheck";
-          rev = "31122714e1971d8403d9daf5815482bf5118c94d";
-          sha256 = "0ag0ffh4lnnsiqfplnjlwd7lnvz3zjnw68a2pf17jgx28jwdqz64";
+          rev = "b1c1ead1292b56fdb59916cf9a2e36312979f205";
+          sha256 = "1dqkn8j0k2wiv7ycfxgqiblj2dnj95aj7yyy9ijbw1prqmr5dy06";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/649f9c3576e81409ae396606798035173cc6669f/recipes/flycheck";
@@ -24470,12 +24588,12 @@
     flycheck-dmd-dub = callPackage ({ f, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild }:
     melpaBuild {
         pname = "flycheck-dmd-dub";
-        version = "20180119.1220";
+        version = "20180208.855";
         src = fetchFromGitHub {
           owner = "atilaneves";
           repo = "flycheck-dmd-dub";
-          rev = "d4f6fde2ce5cbdbfef44b68affee394c9c891a1c";
-          sha256 = "11wg0mgrw2sphfr8dm27x500lyw6lkf94yk8nmlxx2fb2ns1nlyk";
+          rev = "0b374e5cd3cc87954e3b6193a671dbc060d88339";
+          sha256 = "0g357wm84yc80g3cfxm6ffk15jw49za3qsfh60jij8619k1d6719";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/a812594901c1099283bdf51fbea1aa077cfc588d/recipes/flycheck-dmd-dub";
@@ -24659,12 +24777,12 @@
     flycheck-haskell = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, flycheck, haskell-mode, let-alist, lib, melpaBuild, seq }:
     melpaBuild {
         pname = "flycheck-haskell";
-        version = "20180125.1531";
+        version = "20180209.1357";
         src = fetchFromGitHub {
           owner = "flycheck";
           repo = "flycheck-haskell";
-          rev = "f97cefa9b69235bdc9a406c54d223ea26fb33107";
-          sha256 = "1kcm0lssjb5lqx556sxxw1v1pvp7hybw38a4sva2s0is3w9pxl1y";
+          rev = "cbc4a54c0bb9ab0b9559a1e2b7eb1c02c2f38f14";
+          sha256 = "1kxcc12vrxbcpc8wjf9srczlhqjqs8nxdi8z01zd7d5fxcafikwh";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/6ca601613788ae830655e148a222625035195f55/recipes/flycheck-haskell";
@@ -24911,12 +25029,12 @@
     flycheck-mmark = callPackage ({ emacs, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild }:
     melpaBuild {
         pname = "flycheck-mmark";
-        version = "20180118.328";
+        version = "20180203.932";
         src = fetchFromGitHub {
           owner = "mmark-md";
           repo = "flycheck-mmark";
-          rev = "b73b40cb9c5cf6bc6fa501aa87a4c30b210c0c5f";
-          sha256 = "1w75accl67i0qwadwp7dgpxaj0i8zwckvv5isyn93vknzw5dz66x";
+          rev = "7fdcc48ff6ffa5e7db126a76f4948ab08b9eb8d4";
+          sha256 = "0g6a8nm5mxgca7psyi127ky68mal0lj7n486fgrwsg3bxglbsk5m";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/2fd10423ab80e32245bb494005c8f87a8987fffb/recipes/flycheck-mmark";
@@ -25272,8 +25390,8 @@
         src = fetchFromGitHub {
           owner = "Andersbakken";
           repo = "rtags";
-          rev = "53e74892e8bd15baa4d1bd1d640dcabcba9667ee";
-          sha256 = "0ynhx1cyxvrmkadb8h81xrhxvf9wssq74xk236dhl7q1mqagnjaf";
+          rev = "2b0c88cc470b06b65232c23df4b6fbfc4b534580";
+          sha256 = "047w0khlcawwr9rz7ss52x9jzam4pdqd1cwgx7nqiyv3cd47xfsy";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/flycheck-rtags";
@@ -25289,12 +25407,12 @@
     flycheck-rust = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, flycheck, let-alist, lib, melpaBuild, seq }:
     melpaBuild {
         pname = "flycheck-rust";
-        version = "20170404.842";
+        version = "20171021.151";
         src = fetchFromGitHub {
           owner = "flycheck";
           repo = "flycheck-rust";
-          rev = "a89c0298f5e8fdcb0c33833ca1eca64632cec053";
-          sha256 = "1h2n1y69fxj2naxlyl7056rhggbpmh13ny2rcf0jjr1qnrrq756n";
+          rev = "c5838f51d41e1330ec69b46e09f25f9764be1d2a";
+          sha256 = "1app3vcv1myabj8wmla5dpifh63c21bmljqvvykz8a9d7hagq3gc";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/68d8cdf3d225b13ebbbe5ce81a01366f33266aed/recipes/flycheck-rust";
@@ -25331,12 +25449,12 @@
     flycheck-status-emoji = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, flycheck, let-alist, lib, melpaBuild }:
     melpaBuild {
         pname = "flycheck-status-emoji";
-        version = "20170923.1439";
+        version = "20180210.1000";
         src = fetchFromGitHub {
           owner = "liblit";
           repo = "flycheck-status-emoji";
-          rev = "840e6469c5a83a2438c7e8c5833e3d22b8480f8a";
-          sha256 = "0aq0yfa2fic8i364y7m779dsyxgd6mlp38hbl97f3hpsfwrkh34l";
+          rev = "ca3d3993cd30d8881dabebd1c540d819967c0212";
+          sha256 = "0nqw77q31k6y0lc5v7ly8vnnyl72k8y0jxj9dclqfiq9ch53y3c3";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/5abd6aaa8d2bf55ae75cd217820763531f91958b/recipes/flycheck-status-emoji";
@@ -25541,12 +25659,12 @@
     flycheck-ycmd = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, flycheck, let-alist, lib, melpaBuild, ycmd }:
     melpaBuild {
         pname = "flycheck-ycmd";
-        version = "20170614.1434";
+        version = "20180207.843";
         src = fetchFromGitHub {
           owner = "abingham";
           repo = "emacs-ycmd";
-          rev = "7f394d02f6f3149b215adcc96043c78d5f32d612";
-          sha256 = "0q7y0cg2gw15sm0yi45gc81bsrybv8w8z58vjlq1qp0nxpcz3ipl";
+          rev = "e21c99de8fd2992031adaa758df0d495e55d682a";
+          sha256 = "1l9xsqlcqi25mdka806gz3h4y4x0dh00n6bajh3x908ayixjgf91";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/flycheck-ycmd";
@@ -26637,8 +26755,8 @@
         src = fetchFromGitHub {
           owner = "cadadr";
           repo = "elisp";
-          rev = "41045e36a31782ecdfeb49918629fc4af94876e7";
-          sha256 = "0isvmly7pslb9q7nvbkdwfja9aq9wa73azbncgsa63a2wxmwjqac";
+          rev = "497c7e68df5e3b6b8c3ebaaf6edfce6b2d29b616";
+          sha256 = "1j15dfg1mr21vyf7c9h3dij1pnikwvmxr3rs0vdrx8lz9x321amf";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/a7ea18a56370348715dec91f75adc162c800dd10/recipes/forecast";
@@ -26822,12 +26940,12 @@
     fountain-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "fountain-mode";
-        version = "20180107.2123";
+        version = "20180211.2037";
         src = fetchFromGitHub {
           owner = "rnkn";
           repo = "fountain-mode";
-          rev = "361f2a58151c9e6ab52b59cdd230a3add461a2bb";
-          sha256 = "10sgscfw70yw6khzl4nr1w1zh28g7rh4fwr3p2q4ny4z1zsxvbl9";
+          rev = "863e9a0d6753ce46e978819a624659ca8d4385a4";
+          sha256 = "0smr5a19qvak45hx21j5g507jmrb1g5y19gz3n9yb82darlvpdh5";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/913386ac8d5049d37154da3ab32bde408a226511/recipes/fountain-mode";
@@ -27111,12 +27229,12 @@
     fuel = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "fuel";
-        version = "20180129.312";
+        version = "20180207.1149";
         src = fetchFromGitHub {
           owner = "factor";
           repo = "factor";
-          rev = "5709e0b621dc56491d4b52782f190744be2ca0a1";
-          sha256 = "0a29p14fa2xqbafdl0l5wgrch89klp0v5naqkrn2vii1gfkcyck6";
+          rev = "5fb53c851ca2e37f9e71f165d5536d3fcd553466";
+          sha256 = "1bqryhbz9hyjvfagss0rdffhpg0j1ay3c0al99dgs0gd3cx2dp42";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/1e2a0e4698d4e71ec28656594f6a83504a823490/recipes/fuel";
@@ -27241,8 +27359,8 @@
         src = fetchFromGitHub {
           owner = "HIPERFIT";
           repo = "futhark";
-          rev = "e6406d573c58ac30eec0a263211ffb4f06437925";
-          sha256 = "0ydfhnbn4z50l777y8c1b85mfvk71rvwbjrn43kyqxasxdry5n59";
+          rev = "f3a37a6f749262dee56b4dbdac3a974b2413ff95";
+          sha256 = "0pddsg1map44sxdljb1gnrzcb60iahxa7hzzffc5q2y1a8iqpd8d";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/0607f01aad7e77d53595ad8db95d32acfd29b148/recipes/futhark-mode";
@@ -27300,12 +27418,12 @@
     fwb-cmds = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "fwb-cmds";
-        version = "20160523.535";
+        version = "20180206.1549";
         src = fetchFromGitHub {
           owner = "tarsius";
           repo = "fwb-cmds";
-          rev = "57973f99cf4a185b5cccbf941478fad25e8428c3";
-          sha256 = "1c7h043lz10mw1hdsx9viksy6q79jipz2mm18y1inlbqhmg33n2b";
+          rev = "7d4abf8aa13b2235e4e2f0bb9049ebd6b491f710";
+          sha256 = "10xjs8gm9l3riffxip1ffg8xhcf8srffh01yn6ifyln5f70b063d";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/fe40cdeb5e19628937820181479897acdad40200/recipes/fwb-cmds";
@@ -27550,12 +27668,12 @@
     geiser = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "geiser";
-        version = "20180128.1821";
+        version = "20180202.1825";
         src = fetchFromGitHub {
           owner = "jaor";
           repo = "geiser";
-          rev = "33783307abab46433ce18273f562b3a729628e8e";
-          sha256 = "1vzcfy9qw32xmi7h4g9vlnxp2z2f23s01nqgs5vp42vls5yzdirr";
+          rev = "e1603edd6f64094495af34432f0d9be621173403";
+          sha256 = "0qab1c3d9glp15sh1b1i40zlg50phhix5c2k0vr2i9j6wl8vc80b";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/b0fe32d24cedd5307b4cccfb08a7095d81d639a0/recipes/geiser";
@@ -27571,12 +27689,12 @@
     general = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "general";
-        version = "20180121.1539";
+        version = "20180130.2055";
         src = fetchFromGitHub {
           owner = "noctuid";
           repo = "general.el";
-          rev = "cc9983470cc5152c9de584e971ffc8bd38413616";
-          sha256 = "039vs972f6gwk9b1wpzs0qkznh6y0jw7cxlc7q5v6hmkx67bch0i";
+          rev = "63333fcc7fc181949601b75a4296fd3a338f287c";
+          sha256 = "11lfia2jx1vaizd1afln0v5s8y2czkhrrdgn01j1mq104kapxain";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/d86383b443622d78f6d8ff7b8ac74c8d72879d26/recipes/general";
@@ -27865,12 +27983,12 @@
     ghub = callPackage ({ emacs, fetchFromGitHub, fetchurl, let-alist, lib, melpaBuild }:
     melpaBuild {
         pname = "ghub";
-        version = "20180117.1249";
+        version = "20180201.414";
         src = fetchFromGitHub {
           owner = "magit";
           repo = "ghub";
-          rev = "f1b647faf5ce5f033728236b9263e7ecee8f536f";
-          sha256 = "1hk3ww1q5h1zywjwsprx7268bq2783d03b0ydzv97klpqniw7rs0";
+          rev = "b267bb6c55b0c05aec4d3fe0e9385ab0e1139463";
+          sha256 = "10rwl2nv8gk9bzj7cwmgzvcsscgb83aw5ag9jj7sv638w4acmn21";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/d5db83957187c9b65f697eba7e4c3320567cf4ab/recipes/ghub";
@@ -27886,12 +28004,12 @@
     ghub-plus = callPackage ({ apiwrap, emacs, fetchFromGitHub, fetchurl, ghub, lib, melpaBuild }:
     melpaBuild {
         pname = "ghub-plus";
-        version = "20180121.1435";
+        version = "20180203.1017";
         src = fetchFromGitHub {
           owner = "vermiculus";
           repo = "ghub-plus";
-          rev = "8dfd995ca4b3b0f94dbf4cc09ec50b8ebedf5c0f";
-          sha256 = "0vw4qszisjc07anzmgknxfcancldyq11i9z16w6rkdi1fb7in27l";
+          rev = "80a8e9480839eddf1e4e48a23b03ae17d4dffe0d";
+          sha256 = "1wdkniszcd5zaqvhfw5j82icf7hh6jy0fg0sifmcmfssvb7xx97n";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/03a412fd25218ff6f302734e078a699ff0234e36/recipes/ghub+";
@@ -27907,12 +28025,12 @@
     gift-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "gift-mode";
-        version = "20171121.653";
+        version = "20180204.1358";
         src = fetchFromGitHub {
           owner = "csrhodes";
           repo = "gift-mode";
-          rev = "f8c9a495e3c6a47dbfdcb719bcbd0f8522297340";
-          sha256 = "1lpdx6lb2skjgqwsjcc8wzy6q85sp7d4y97xkibvvv4czchsg174";
+          rev = "b8dcb86c7f83df0fbdc0da4f80c187423c936e50";
+          sha256 = "01x87aam43xmhx7np9rvrdhln3pwn4zfn4d8s38rdpi77n9prw5k";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/c4c9081a60bdbf4e5fe1ccc4809c0f6f396d11e4/recipes/gift-mode";
@@ -28009,6 +28127,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    git-attr = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "git-attr";
+        version = "20180204.15";
+        src = fetchFromGitHub {
+          owner = "arnested";
+          repo = "emacs-git-attr";
+          rev = "c03078637a00ea301cbcc7ae301ae928b10af889";
+          sha256 = "05wzy8g0yjkks0zmcvwn9dmr6kxk1bz91xic3c08b0j1z5lbsdv7";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/3417e4bc586df60b5e6239b1f7683b87953f5b7c/recipes/git-attr";
+          sha256 = "084l3zdcgy1ka2wq1fz9d6ryhg38gxvr52njlv43gwibzvbqniyi";
+          name = "git-attr";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/git-attr";
+          license = lib.licenses.free;
+        };
+      }) {};
     git-auto-commit-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "git-auto-commit-mode";
@@ -28075,12 +28214,12 @@
     git-commit = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, with-editor }:
     melpaBuild {
         pname = "git-commit";
-        version = "20180126.913";
+        version = "20180202.321";
         src = fetchFromGitHub {
           owner = "magit";
           repo = "magit";
-          rev = "275a32b8af950f59324d69c39f01d653948f6481";
-          sha256 = "1cm1ryd4hidaybv323gjbrqpdaicwr18ar7bhzkfjnkakvrb35pj";
+          rev = "10a1f08f39373bfc2ed86858cf02d82bfcdb7be8";
+          sha256 = "1bk1a34yi37gsb6n7a68pkia100q0jyj2x5bs8hkf0q48rh4dvl3";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/cec5af50ae7634cc566adfbfdf0f95c3e2951c0c/recipes/git-commit";
@@ -28327,12 +28466,12 @@
     git-timemachine = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "git-timemachine";
-        version = "20170325.220";
+        version = "20180208.1342";
         src = fetchFromGitHub {
           owner = "pidu";
           repo = "git-timemachine";
-          rev = "92f8ad4afc802d01c24426ff52ad6fefb3bb91be";
-          sha256 = "1ljgc7jmll3534zj1r72gh4al909slhiriscqv9lmvqzdiy3l21g";
+          rev = "8e85fff38a7aec727d29d93b79f57c2a9f95c488";
+          sha256 = "0ds5pbg87r7ydip2dwdc3dagjby5j5q7rnrl14wpkzm3xq1zpjl3";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/41e95e41fc429b688f0852f58ec6ce80303b68ce/recipes/git-timemachine";
@@ -28915,12 +29054,12 @@
     gnu-apl-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "gnu-apl-mode";
-        version = "20180124.143";
+        version = "20180129.2300";
         src = fetchFromGitHub {
           owner = "lokedhs";
           repo = "gnu-apl-mode";
-          rev = "dc46c72e1a4e759c04d17c0411a8c53c2f9915f5";
-          sha256 = "03ia362bwkkkysfp2wz5jpqlvsjvvzgl06i1gcrkb1aa8ssb82lc";
+          rev = "fa569827c916ed46e410e9f28e4b4d28f8567654";
+          sha256 = "0x1i1xcd3d34c9c87isd39d9ra69ywd01ag0hgkkgdzrk44znshj";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/369a55301bba0c4f7ce27f6e141944a523beaa0f/recipes/gnu-apl-mode";
@@ -29776,12 +29915,12 @@
     google-c-style = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "google-c-style";
-        version = "20140929.1118";
+        version = "20180130.936";
         src = fetchFromGitHub {
           owner = "google";
           repo = "styleguide";
-          rev = "9663cabfeeea8f1307b1acde59471f74953b8fa9";
-          sha256 = "0277vsj0shrlgb96zgy8lln55l2klzkk6h28g4srbpgkwz5xxsx7";
+          rev = "cfce3c3a866cfa9ec12fff08d5e575ca875f787b";
+          sha256 = "0h35802dp9y29yvrqvkhd2b9x6jkqlwz46k5lgvabsiddqq4x2sn";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/b4e7f5f641251e17add561991d3bcf1fde23467b/recipes/google-c-style";
@@ -30053,8 +30192,8 @@
         src = fetchFromGitHub {
           owner = "vmware";
           repo = "govmomi";
-          rev = "406990cbb165af7510b6282f88742c005edd2aa1";
-          sha256 = "1pm5ndfxf6qmq4dlvawd4v8j75ipl12vbw13yxzrc5q0rfqqqgdl";
+          rev = "d9021ec5f7105414166ac8b535b7de9f1c115cfd";
+          sha256 = "02vdb7xp3dgqv83qcandsyq60i8pxvz4yq0d3lk3xl15hi3l75ji";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/92d6391318021c63b06fe39b0ca38f667bb45ae9/recipes/govc";
@@ -30112,12 +30251,12 @@
     grab-x-link = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "grab-x-link";
-        version = "20161130.2147";
+        version = "20180205.346";
         src = fetchFromGitHub {
           owner = "xuchunyang";
           repo = "grab-x-link";
-          rev = "d2ef886097f59e1facc5cb5d8cd1c77bf340be76";
-          sha256 = "1iny8ga9xb7pfd59l4ljlj6zvvxzr7bv468sibkhlaqvjljn2xq1";
+          rev = "d19f0c0da0ddc55005a4c1cdc2b8c5de8bea1e8c";
+          sha256 = "1l9jg2w8ym169b5dhg3k5vksbmicg4n1a55x7ddjysf8n887cpid";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/64d4d4e6f9d6a3ea670757f248afd355baf1d933/recipes/grab-x-link";
@@ -30217,12 +30356,12 @@
     grandshell-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "grandshell-theme";
-        version = "20171230.440";
+        version = "20180131.1439";
         src = fetchFromGitHub {
           owner = "steckerhalter";
           repo = "grandshell-theme";
-          rev = "c8f1dd4ceb3b752bcb4a0122af45e3a197c4fa99";
-          sha256 = "1b0azylab54183kf9nmpx6qb8hrr91fsxladwfmiljrcpvf6pdh8";
+          rev = "823232a83a51e8a3f7b4db09e23658fc1a1c93ca";
+          sha256 = "0a1svfbxw7g31rnf3lcjsy2x21s14c2gpbrzjpl06qa0p3cnn4db";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/5b04b0024f5a0367e2998d35ca88c2613a8e3470/recipes/grandshell-theme";
@@ -30646,12 +30785,12 @@
     gruvbox-theme = callPackage ({ autothemer, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "gruvbox-theme";
-        version = "20171118.1312";
+        version = "20180210.756";
         src = fetchFromGitHub {
           owner = "Greduan";
           repo = "emacs-theme-gruvbox";
-          rev = "fb4f0a2dd3d146678fee3bf4d7bfce1c8e7cbd00";
-          sha256 = "0n9z3m10sim28q2k760vhwczzdprla92hi0g8prpvv1g6bb8qrs7";
+          rev = "156848895d16057c1dda2fdde5a7dde3053c9948";
+          sha256 = "04szg56wxf0x7w8nvf98fmnry2s77kx7jg7j6gjkp16nr0asiqp8";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/2bd48c87919f64ced9f3add4860751bb34cb5ecb/recipes/gruvbox-theme";
@@ -30793,12 +30932,12 @@
     guix = callPackage ({ bui, dash, emacs, fetchFromGitHub, fetchurl, geiser, lib, magit-popup, melpaBuild }:
     melpaBuild {
         pname = "guix";
-        version = "20180107.1303";
+        version = "20180207.952";
         src = fetchFromGitHub {
           owner = "alezost";
           repo = "guix.el";
-          rev = "b4d897f7daafb5794809760340548b96b0a89ac3";
-          sha256 = "1bl6k0vdjl9b10pz76afwnmagjjazp1pxl9rash4m1f6zry4hbj7";
+          rev = "1d400fd2f4b21e8fd834887198fe6587933a9cc7";
+          sha256 = "03q8rq74zxil5aws18wysiyk8zxyp9w0sqxcnk79d1p5hdgn09p2";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/b3d8c73e8a946b8265487a0825d615d80aa3337d/recipes/guix";
@@ -30961,12 +31100,12 @@
     hackernews = callPackage ({ fetchFromGitHub, fetchurl, json ? null, lib, melpaBuild }:
     melpaBuild {
         pname = "hackernews";
-        version = "20180117.1302";
+        version = "20180206.1739";
         src = fetchFromGitHub {
           owner = "clarete";
           repo = "hackernews.el";
-          rev = "fe0c7284f17f00cc6f1971a9bd565467faa0574e";
-          sha256 = "0kxj49x16j7avbgry6advw4qixr76hdawfq6vy8rfj42kzmdj179";
+          rev = "087af78262c40fddf9412fa73f7d4d8c6811282a";
+          sha256 = "0s8hazfw1nd7sk7nky22d1lq8vqhfba5a2gm4y96s6g31h5wd71d";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/c43a342e47e5ede468bcf51a60d4dea3926f51bd/recipes/hackernews";
@@ -31568,12 +31707,12 @@
     helm = callPackage ({ async, emacs, fetchFromGitHub, fetchurl, helm-core, lib, melpaBuild, popup }:
     melpaBuild {
         pname = "helm";
-        version = "20180127.2219";
+        version = "20180209.2348";
         src = fetchFromGitHub {
           owner = "emacs-helm";
           repo = "helm";
-          rev = "5882f69be33e255b4f3cb182879c9cf5464364e6";
-          sha256 = "0k4mlffs5a2k1g53dzrkqclhkcsyzvn9z1nmhwajhlrijx8z8ym9";
+          rev = "749904ca3e49db17751b906a9781c3da0e4a2b43";
+          sha256 = "0zx052y7pxa0zcrgxn2krv6xz4w8l4fcn6wxks64rwkci7n5ywim";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/7e8bccffdf69479892d76b9336a4bec3f35e919d/recipes/helm";
@@ -32030,12 +32169,12 @@
     helm-cider = callPackage ({ cider, emacs, fetchFromGitHub, fetchurl, helm-core, lib, melpaBuild }:
     melpaBuild {
         pname = "helm-cider";
-        version = "20180120.1212";
+        version = "20180202.1818";
         src = fetchFromGitHub {
           owner = "clojure-emacs";
           repo = "helm-cider";
-          rev = "739589b6c6b3cedc71ca366da95fd1b147931c34";
-          sha256 = "025z5dbrh5a9jwrfsckvmzd4nxq672m6bfikzcmhkvqs89kw1s2s";
+          rev = "f498727b2a742560256942ea184dcb28c455fee2";
+          sha256 = "1g7hy6fjym11yznzb8m5cn9bq5ys5iszf81hhwyia5n8qdvnlmm5";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/helm-cider";
@@ -32135,12 +32274,12 @@
     helm-codesearch = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, s }:
     melpaBuild {
         pname = "helm-codesearch";
-        version = "20180127.2237";
+        version = "20180203.2033";
         src = fetchFromGitHub {
           owner = "youngker";
           repo = "helm-codesearch.el";
-          rev = "1ccbd68acab682d2d348aaff81022123939e53fd";
-          sha256 = "1afjvdjqp91n44ijfc5kh8x5lmkiyncin5l25rfpxcljkfixblcr";
+          rev = "87a68168b7c1490769305db0df60035e47799a75";
+          sha256 = "0wiyz0kh2m2mpjhnl2mvsx2gvhkmmk0xaw432mxr48zz9jjnlha9";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/0a992824e46a4170e2f0915f7a507fcb8a9ef0a6/recipes/helm-codesearch";
@@ -32198,12 +32337,12 @@
     helm-core = callPackage ({ async, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "helm-core";
-        version = "20180129.39";
+        version = "20180206.10";
         src = fetchFromGitHub {
           owner = "emacs-helm";
           repo = "helm";
-          rev = "5882f69be33e255b4f3cb182879c9cf5464364e6";
-          sha256 = "0k4mlffs5a2k1g53dzrkqclhkcsyzvn9z1nmhwajhlrijx8z8ym9";
+          rev = "749904ca3e49db17751b906a9781c3da0e4a2b43";
+          sha256 = "0zx052y7pxa0zcrgxn2krv6xz4w8l4fcn6wxks64rwkci7n5ywim";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/ef7a700c5665e6d72cb4cecf7fb5a2dd43ef9bf7/recipes/helm-core";
@@ -32975,12 +33114,12 @@
     helm-google = callPackage ({ fetchFromGitHub, fetchurl, helm, lib, melpaBuild }:
     melpaBuild {
         pname = "helm-google";
-        version = "20171215.1159";
+        version = "20180212.240";
         src = fetchFromGitHub {
           owner = "steckerhalter";
           repo = "helm-google";
-          rev = "bf3b04e04db5bc99b621b90b7d58a5438db14c66";
-          sha256 = "06848hjbwj8bkdinbmmzh2sc92l9chzwbglyfl17bwxkcdbxd54i";
+          rev = "6490074b81ecbc6d96df662fa076cf9194158f17";
+          sha256 = "0xriaaz3qrxc9j68x0fm55hb8iwag5y03xx179yfa6884jx0iik7";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/88ed6db7b53d1ac75c40d12c21de1dec6d717fbe/recipes/helm-google";
@@ -33668,12 +33807,12 @@
     helm-org-rifle = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, s }:
     melpaBuild {
         pname = "helm-org-rifle";
-        version = "20180115.137";
+        version = "20180207.1539";
         src = fetchFromGitHub {
           owner = "alphapapa";
           repo = "helm-org-rifle";
-          rev = "cd875b796e1a5d36ca99dede653a8e315a00029a";
-          sha256 = "004sxd3v414ac7d85jkfq36nbicyr153gias0rbmlykv660xf5dy";
+          rev = "81a84a071c9ec9313b9b13e0c89b9e499268436a";
+          sha256 = "0ipz4r2cdvxsrzgsrcrxchj8vvgfqz7whd61smfn7h6sakljk2xm";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/f39cc94dde5aaf0d6cfea5c98dd52cdb0bcb1615/recipes/helm-org-rifle";
@@ -33731,12 +33870,12 @@
     helm-pass = callPackage ({ auth-password-store, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, password-store }:
     melpaBuild {
         pname = "helm-pass";
-        version = "20180103.1838";
+        version = "20180208.1313";
         src = fetchFromGitHub {
           owner = "jabranham";
           repo = "helm-pass";
-          rev = "986af08301476bc6a1c8645dc5d2302a31d5044d";
-          sha256 = "1hbpwi4sbibsckrldlgny3wc9cw3y9qv7x98b4x3w78ldns50qpq";
+          rev = "231c496eb2da4ecf26fcf8545de9a9819683a17f";
+          sha256 = "1lv47cwb3j7lvx8qd4p5ripmvh3ixyd0x5bql143hja396wx12rr";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/d8100599d69a760cd4548004a552cc0adcdb3bed/recipes/helm-pass";
@@ -34085,6 +34224,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    helm-rg = callPackage ({ cl-lib ? null, dash, emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild }:
+    melpaBuild {
+        pname = "helm-rg";
+        version = "20180205.2231";
+        src = fetchFromGitHub {
+          owner = "cosmicexplorer";
+          repo = "helm-rg";
+          rev = "906aa2af60998b1ac2b37e30d7316f2059c9ea55";
+          sha256 = "1yibmlx1na4ff0h9r6j4cqw55z2ggfrzj02b20m2bwm19pyxacm2";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/958fbafdcb214f1ec89fd0d84c6600c89890e0cf/recipes/helm-rg";
+          sha256 = "0gfq59540q9s6mr04q7dz638zqmqbqmbl1qaczddgmjn4vyjmf7v";
+          name = "helm-rg";
+        };
+        packageRequires = [ cl-lib dash emacs helm ];
+        meta = {
+          homepage = "https://melpa.org/#/helm-rg";
+          license = lib.licenses.free;
+        };
+      }) {};
     helm-rhythmbox = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, helm, lib, melpaBuild }:
     melpaBuild {
         pname = "helm-rhythmbox";
@@ -34155,8 +34315,8 @@
         src = fetchFromGitHub {
           owner = "Andersbakken";
           repo = "rtags";
-          rev = "53e74892e8bd15baa4d1bd1d640dcabcba9667ee";
-          sha256 = "0ynhx1cyxvrmkadb8h81xrhxvf9wssq74xk236dhl7q1mqagnjaf";
+          rev = "2b0c88cc470b06b65232c23df4b6fbfc4b534580";
+          sha256 = "047w0khlcawwr9rz7ss52x9jzam4pdqd1cwgx7nqiyv3cd47xfsy";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/helm-rtags";
@@ -34424,12 +34584,12 @@
     helm-system-packages = callPackage ({ emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, seq }:
     melpaBuild {
         pname = "helm-system-packages";
-        version = "20180129.530";
+        version = "20180210.1307";
         src = fetchFromGitHub {
           owner = "emacs-helm";
           repo = "helm-system-packages";
-          rev = "2f5297294901d1845e2245bca76486c383f1c49c";
-          sha256 = "03qb5al26qfn2sh3bwnvfyqxiwbxgmcwd4qkbad32nsk4s51d1z0";
+          rev = "715a8ee0257d7d7138d4cd0cfdd61ee0ebb8ee08";
+          sha256 = "0hc51ndn3jaxykflr5mkhwc7lajp5fsnzxpqwr17hqq4aa6g1sci";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/0c46cfb0fcda0500e15d04106150a072a1a75ccc/recipes/helm-system-packages";
@@ -34445,12 +34605,12 @@
     helm-systemd = callPackage ({ emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, with-editor }:
     melpaBuild {
         pname = "helm-systemd";
-        version = "20160517.2333";
+        version = "20180130.2034";
         src = fetchFromGitHub {
           owner = "lompik";
           repo = "helm-systemd";
-          rev = "0892535baa405a2778be2f0f013bac768e72b1f9";
-          sha256 = "1yqwq8a5pw3iaj69kqvlgn4hr18ssx39lnm4vycbmsg1bi2ygfzw";
+          rev = "96f5cd3ee3412539c2f8d145201f47c4f8e53b4f";
+          sha256 = "0wyabh76q2lighd7qxpkzp35fkblxlz8g7p4lpgfwvjid0ixmnvq";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/helm-systemd";
@@ -34694,22 +34854,22 @@
           license = lib.licenses.free;
         };
       }) {};
-    helpful = callPackage ({ dash, dash-functional, elisp-refs, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s, shut-up }:
+    helpful = callPackage ({ dash, dash-functional, elisp-refs, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, s, shut-up }:
     melpaBuild {
         pname = "helpful";
-        version = "20180120.355";
+        version = "20180209.1706";
         src = fetchFromGitHub {
           owner = "Wilfred";
           repo = "helpful";
-          rev = "6530314def5685772387f67d118ff31cbb2fad7a";
-          sha256 = "13lcyzy6c2lhlxflxhm3h1m755s3m1fm9qakicb8iklvbzmqycbd";
+          rev = "874351d34d32f935e3f20485a544681de369c756";
+          sha256 = "11mfk5bd1837ln8b2ryi9rksmjsg7lwkylzy8qxb054l5i94vc19";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/889d34b654de13bd413d46071a5ff191cbf3d157/recipes/helpful";
           sha256 = "17w9j5v1r2c8ka1fpzbr295cgnsbiw8fxlslh4zbjqzaazamchn2";
           name = "helpful";
         };
-        packageRequires = [ dash dash-functional elisp-refs emacs s shut-up ];
+        packageRequires = [ dash dash-functional elisp-refs emacs f s shut-up ];
         meta = {
           homepage = "https://melpa.org/#/helpful";
           license = lib.licenses.free;
@@ -34970,12 +35130,12 @@
     highlight = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "highlight";
-        version = "20180125.1126";
+        version = "20180131.1216";
         src = fetchFromGitHub {
           owner = "steckerhalter";
           repo = "highlight.el";
-          rev = "2371d6d134f07ac648d525b7eafd4eecfb0e36fe";
-          sha256 = "0x0mr52fy1cc6f710ibqy0fh68jpfb1gj4ddg173q0azb76m2klq";
+          rev = "bb8694b8e642a45f07ce8897de0785c5a776441c";
+          sha256 = "0s4fkxnd4x3j864mgaiv95iwdjmps4xj2mlaljljc8y04k9q5l9k";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/89c619b90665385c8f5408935105c52b4d0290ab/recipes/highlight";
@@ -35473,12 +35633,12 @@
     historian = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "historian";
-        version = "20180102.2118";
+        version = "20180210.2119";
         src = fetchFromGitHub {
           owner = "PythonNut";
           repo = "historian.el";
-          rev = "ba560443a216befd4460fcf16dc6c7f23cb73d8d";
-          sha256 = "1g1p02kx50nry4vm5bcp7kyjnn9lafc9a57nirnkf0gm41m6yj8q";
+          rev = "ec3dfa8786473e52ffc5ca9be95dbc59a9a87ff7";
+          sha256 = "1bxigdg3pmgc0s4il1spdw0p8y98k4hwwd89m4i3y97l43asy6p1";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/f16dacf64c52767c0c8aef653ac5d1a7a3bd0883/recipes/historian";
@@ -35933,12 +36093,12 @@
     ht = callPackage ({ dash, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "ht";
-        version = "20171213.1334";
+        version = "20180129.1434";
         src = fetchFromGitHub {
           owner = "Wilfred";
           repo = "ht.el";
-          rev = "64af52688eb09eb42b7228a4e8e40d4a81cd983b";
-          sha256 = "1qz1zynkb1nanyi0ylllv80gzkgl2bgx9y82g07w1rfa86qgaghg";
+          rev = "5a665d00dc8fda77bad2a43277d8809c23e46ab8";
+          sha256 = "0w0zi393ixgi154c6dq2i1kf3kraqyfw8alfxcn6fhhxy1g9p02y";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/6c7589bca1c1dfcc0fe76779f6847fda946ab981/recipes/ht";
@@ -36273,8 +36433,8 @@
         src = fetchFromGitHub {
           owner = "iquiw";
           repo = "hyai";
-          rev = "e9a7e945fed12d8e664e898cf8b434b0376d5d80";
-          sha256 = "1sbn4h74crawdy8yjdjklxh1q6js5y9ip5qxf6dfi85h82qizpa8";
+          rev = "286cece5ca187ebb9d5fba5ac86e452cc638b8d3";
+          sha256 = "1gycq2jp6540kiggv3fhmgqsyqvc36jwbyydx1i6w1brpcwvc6dx";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/1dd9bd1cfd2f3b760b664a4677b0e4e617cbdfa6/recipes/hyai";
@@ -36332,12 +36492,12 @@
     hydra = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "hydra";
-        version = "20171120.1042";
+        version = "20180201.846";
         src = fetchFromGitHub {
           owner = "abo-abo";
           repo = "hydra";
-          rev = "1deed8a00e6936903cace1dac123364b6c0cde90";
-          sha256 = "0jraj3l7w0bw2c6qkq1bfdfa2zf7xssmk9cdkdgbjjip5xvq31ns";
+          rev = "cf961400796aea8b385b64ac0ad31c1e2500cf6a";
+          sha256 = "03ffjrq4hidvxb6m4kk0xp8rmi53al16nab6lbid5brky67hvpmq";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/a4375d8ae519290fd5018626b075c226016f951d/recipes/hydra";
@@ -36393,12 +36553,12 @@
     ialign = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "ialign";
-        version = "20180120.304";
+        version = "20180202.1447";
         src = fetchFromGitHub {
           owner = "mkcms";
           repo = "interactive-align";
-          rev = "6afe9a62ae9dccf8e2348d73f9d5637a906b1cf6";
-          sha256 = "0d4x74g8s4x9q434kwfwyn2rvw4myayh7dr7r1nbh8gnijwrnpsz";
+          rev = "523df320197b587abd8c0ec4e9fbc763aeab1cf6";
+          sha256 = "04jak5j4yywl7fn5sggc125yh6cy0livf55194mfxs2kmbs5wm0h";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/072f1f7ce17e2972863bce10af9c52b3c6502eab/recipes/ialign";
@@ -37107,12 +37267,12 @@
     idris-mode = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, prop-menu }:
     melpaBuild {
         pname = "idris-mode";
-        version = "20171212.759";
+        version = "20180210.400";
         src = fetchFromGitHub {
           owner = "idris-hackers";
           repo = "idris-mode";
-          rev = "2206501895668e1cd395119921bbcd2b16165600";
-          sha256 = "1s185lkkbjh2811qs4grgq916x83m58ifl85g9ji9ll4vr3p1al5";
+          rev = "cc35d124332aba84dc3e4da94433127a12459351";
+          sha256 = "056yfgfqxzcfmlk2kj34r1dpjxi0xllcllkhrc9v8d9cib7hjqqf";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/17a86efca3bdebef7c92ba6ece2de214d283c627/recipes/idris-mode";
@@ -37149,12 +37309,12 @@
     iedit = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "iedit";
-        version = "20170916.1024";
+        version = "20180207.219";
         src = fetchFromGitHub {
           owner = "victorhge";
           repo = "iedit";
-          rev = "5b14cc9fcaef509c50f25cff872fba5d70b2c799";
-          sha256 = "1vlfqh616id2kh35diwig6jswq5q5z22zwrpbdxkginag3sq8732";
+          rev = "412490db4387ad9d040bfb5854f25de4c40c2146";
+          sha256 = "1995j0yvvls5i7zfxw8zwfk05in8b0n82k05qdrap29v6nq2v4bx";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/iedit";
@@ -37671,12 +37831,12 @@
     indium = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, js2-mode, lib, melpaBuild, seq, websocket }:
     melpaBuild {
         pname = "indium";
-        version = "20180122.507";
+        version = "20180131.943";
         src = fetchFromGitHub {
           owner = "NicolasPetton";
           repo = "Indium";
-          rev = "b84d3553edc7db3d95fb1fe9a82a08a0661c72fb";
-          sha256 = "0lqjkhidd2ambasvc52qkipjk88q4jivbm33r48bhw78bik7y8bz";
+          rev = "71299e9bc0d3c75b25ef65e57e9a57c9a17294b4";
+          sha256 = "0f9lnsz8fp68qr67l5rq2ippr1fc0rw8nk2f8cm9x90fd82fxwdl";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/4292058cc6e31cabc0de575134427bce7fcef541/recipes/indium";
@@ -37713,12 +37873,12 @@
     inf-clojure = callPackage ({ clojure-mode, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "inf-clojure";
-        version = "20180128.901";
+        version = "20180129.1828";
         src = fetchFromGitHub {
           owner = "clojure-emacs";
           repo = "inf-clojure";
-          rev = "ec99211bbe9bef6d579a313ab6422694ef63b181";
-          sha256 = "0d54m3g8ahz7xg06qb592ai25ydpjh0dzxxnhbp5jk2l0r0irwnq";
+          rev = "630471b5141cb493305b623e6800c26bc91b3913";
+          sha256 = "00jfx1bavyzla7cid9bhw6fcdfqw8bgnwr920kzg3wmfd8nfv5ry";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/5d6112e06d1efcb7cb5652b0bec8d282d7f67bd9/recipes/inf-clojure";
@@ -37857,6 +38017,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    info-colors = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "info-colors";
+        version = "20180205.350";
+        src = fetchFromGitHub {
+          owner = "ubolonton";
+          repo = "info-colors";
+          rev = "a8ebb7b8efa314c08ea8110d8b1876afb562bb45";
+          sha256 = "0wvyf2w5s184kwacs6lbpjryx6hziayvdrl3crxir8gmg2kcv07m";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/d671ae8dc27439eea427e1848fc11c96ec5aee64/recipes/info-colors";
+          sha256 = "1mbabrfdy9xn7lpqivqm8prp83qmdv5r0acijwvxqd3a52aadc2x";
+          name = "info-colors";
+        };
+        packageRequires = [ cl-lib emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/info-colors";
+          license = lib.licenses.free;
+        };
+      }) {};
     inherit-local = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "inherit-local";
@@ -38195,12 +38376,12 @@
     intero = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, flycheck, haskell-mode, lib, melpaBuild }:
     melpaBuild {
         pname = "intero";
-        version = "20180117.921";
+        version = "20180210.937";
         src = fetchFromGitHub {
           owner = "commercialhaskell";
           repo = "intero";
-          rev = "b6ef262dee10a92bc31935644e087e83957f6d74";
-          sha256 = "1hxfmrq10r39inysa1x104siwdladpdpcdjqbniml0hcpzrdcpd9";
+          rev = "f85e1b47df3bb328be0de34120950cecb3465055";
+          sha256 = "1zng4sliygg1l0jamprx9pfs85jiy19gwxpcy2hs3s4hc7yxjdds";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/1b56ca344ad944e03b669a9974e9b734b5b445bb/recipes/intero";
@@ -38636,12 +38817,12 @@
     isortify = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "isortify";
-        version = "20171223.1812";
+        version = "20180206.450";
         src = fetchFromGitHub {
           owner = "proofit404";
           repo = "isortify";
-          rev = "2db50c1f585db8a8ec5fa28a90a8179516c16cd0";
-          sha256 = "04wzq9cf1bzbyx3jn7anrzc1r64l23s073xqsfcqb8hgh2swcpl6";
+          rev = "18c273ff401643fb903e90dff73c47a4b52268ef";
+          sha256 = "18ziajgjij66g01fyrr1z95z4x2ynfvcyas92b2rvdc1dnsdhs10";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9d4ad18492e7f4a56a1515873bc0b66fa49829bb/recipes/isortify";
@@ -38804,12 +38985,12 @@
     ivy = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "ivy";
-        version = "20180124.1127";
+        version = "20180211.1010";
         src = fetchFromGitHub {
           owner = "abo-abo";
           repo = "swiper";
-          rev = "ffc34c666c2b214d01e3f722249f45d1672566bb";
-          sha256 = "0gzf8l0clh2p86m6xcygykskhigr43cpwfvj1sl06mcq600fxavn";
+          rev = "cc5197d5de78ba981df54815c8615d795e0ffdc5";
+          sha256 = "0c8866mb2ca419b6zh153vp298dxwldj29lbrynwr1jlpjf1dbr5";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/06c24112a5e17c423a4d92607356b25eb90a9a7b/recipes/ivy";
@@ -38867,12 +39048,12 @@
     ivy-erlang-complete = callPackage ({ async, counsel, emacs, erlang, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild }:
     melpaBuild {
         pname = "ivy-erlang-complete";
-        version = "20170709.2151";
+        version = "20180201.427";
         src = fetchFromGitHub {
           owner = "s-kostyaev";
           repo = "ivy-erlang-complete";
-          rev = "acd6322571cb0820868a6febdc5326782a29b729";
-          sha256 = "158cmxhky8nng43jj0d7w8126phx6zlr6r0kf9g2in5nkmbcbd33";
+          rev = "9783970f7dc39aaa8263d420d9d1ed6912c8e19d";
+          sha256 = "1fanxpynp3cigll0x3vknxr8r6plvsbyn34qs28zjfi0l062a8jv";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/ac1b9e350d3f066e4e56202ebb443134d5fc3669/recipes/ivy-erlang-complete";
@@ -38934,8 +39115,8 @@
         src = fetchFromGitHub {
           owner = "PythonNut";
           repo = "historian.el";
-          rev = "ba560443a216befd4460fcf16dc6c7f23cb73d8d";
-          sha256 = "1g1p02kx50nry4vm5bcp7kyjnn9lafc9a57nirnkf0gm41m6yj8q";
+          rev = "ec3dfa8786473e52ffc5ca9be95dbc59a9a87ff7";
+          sha256 = "1bxigdg3pmgc0s4il1spdw0p8y98k4hwwd89m4i3y97l43asy6p1";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/fb79cbc9af6cd443b9de97817d24bcc9050d5940/recipes/ivy-historian";
@@ -38951,12 +39132,12 @@
     ivy-hydra = callPackage ({ emacs, fetchFromGitHub, fetchurl, hydra, ivy, lib, melpaBuild }:
     melpaBuild {
         pname = "ivy-hydra";
-        version = "20171130.1143";
+        version = "20180208.912";
         src = fetchFromGitHub {
           owner = "abo-abo";
           repo = "swiper";
-          rev = "ffc34c666c2b214d01e3f722249f45d1672566bb";
-          sha256 = "0gzf8l0clh2p86m6xcygykskhigr43cpwfvj1sl06mcq600fxavn";
+          rev = "cc5197d5de78ba981df54815c8615d795e0ffdc5";
+          sha256 = "0c8866mb2ca419b6zh153vp298dxwldj29lbrynwr1jlpjf1dbr5";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/06c24112a5e17c423a4d92607356b25eb90a9a7b/recipes/ivy-hydra";
@@ -39056,12 +39237,12 @@
     ivy-rich = callPackage ({ emacs, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild }:
     melpaBuild {
         pname = "ivy-rich";
-        version = "20180109.1933";
+        version = "20180129.2051";
         src = fetchFromGitHub {
           owner = "yevgnen";
           repo = "ivy-rich";
-          rev = "efe35d2f579202ca14a90cfd46ecac624109558c";
-          sha256 = "1vsgz2qg8mxd3lw590zzy9zn72lcvmrixp8j9h65gjqqdwz7xzwn";
+          rev = "d5ce9e90003eeac54654d5ce1f19da55448b05f2";
+          sha256 = "1jjlrz6af7mkdfg66qsrx6q879l4vxjsljl0fbkld77i9fnm005a";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/0fc297f4949e8040d1b0b3271c9a70c64887b960/recipes/ivy-rich";
@@ -39081,8 +39262,8 @@
         src = fetchFromGitHub {
           owner = "Andersbakken";
           repo = "rtags";
-          rev = "53e74892e8bd15baa4d1bd1d640dcabcba9667ee";
-          sha256 = "0ynhx1cyxvrmkadb8h81xrhxvf9wssq74xk236dhl7q1mqagnjaf";
+          rev = "2b0c88cc470b06b65232c23df4b6fbfc4b534580";
+          sha256 = "047w0khlcawwr9rz7ss52x9jzam4pdqd1cwgx7nqiyv3cd47xfsy";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/ivy-rtags";
@@ -39140,12 +39321,12 @@
     ivy-xref = callPackage ({ emacs, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild }:
     melpaBuild {
         pname = "ivy-xref";
-        version = "20171229.252";
+        version = "20180201.1919";
         src = fetchFromGitHub {
           owner = "alexmurray";
           repo = "ivy-xref";
-          rev = "aa97103ea8ce6ab8891e34deff7d43aa83fe36dd";
-          sha256 = "1j4xnr16am5hz02y1jgiz516rqmn43564394qilckmzvi9clhny8";
+          rev = "4d2c437b479733e4159a356c9909ed3e110403a1";
+          sha256 = "19gzsphcmkzyihcijb0609ykv98ak24p3z4k0ifil5r40iss1d1n";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/a4cd8724e8a4119b61950a97b88219bf56ce3945/recipes/ivy-xref";
@@ -40898,12 +41079,12 @@
     kaolin-themes = callPackage ({ autothemer, cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "kaolin-themes";
-        version = "20180128.1459";
+        version = "20180210.710";
         src = fetchFromGitHub {
           owner = "ogdenwebb";
           repo = "emacs-kaolin-themes";
-          rev = "14d73a1ffce245b1ef4bb962bd9d9051e2a9fe1c";
-          sha256 = "1b8669qc8hpz99ybdpz60mls00kxqj1fj6xy522jrhyij87dws7y";
+          rev = "3cf42c74e05982f811417a8d5e7b359732462f8e";
+          sha256 = "0p32zgmmdnsmvcjnkxfbbqq775n9f29w45q54bhdvw63gicnvdwg";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/043a4e3bd5301ef8f4df2cbda0b3f4111eb399e4/recipes/kaolin-themes";
@@ -41406,8 +41587,8 @@
         src = fetchFromGitHub {
           owner = "kivy";
           repo = "kivy";
-          rev = "8776f284f75f5589d3b0c6f1e82795d73e9f3c45";
-          sha256 = "0zhdj13bjvs8yxq1jndgifbniigbmpq35r27fsn014wg3ih5k17q";
+          rev = "1aa4315396c0ee15c282b94f227bbe54b53e7e0a";
+          sha256 = "0w856f20brgakxzngvsikaywkhci961vnasnqyn4a4a5913aa8rw";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/688e2a114073958c413e56e1d117d48db9d16fb8/recipes/kivy-mode";
@@ -41486,12 +41667,12 @@
     kodi-remote = callPackage ({ elnode, fetchFromGitHub, fetchurl, json ? null, let-alist, lib, melpaBuild, request }:
     melpaBuild {
         pname = "kodi-remote";
-        version = "20180126.822";
+        version = "20180205.1242";
         src = fetchFromGitHub {
           owner = "spiderbit";
           repo = "kodi-remote.el";
-          rev = "c49d137f10f8e07de915126a766eb1f59f7fd193";
-          sha256 = "1sja17fd2gvl16jlya6cl2mj7lzg19vgl830yz1dc2iqvf3nnsfi";
+          rev = "4be03d90ac8249ce31df3ef0edb71e0ca11b5ff3";
+          sha256 = "19xg7xss7j1b8hq1wk3kvfprn1lsnym59728v144cxc2f801fh17";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/08f06dd824e67250afafdecc25128ba794ca971f/recipes/kodi-remote";
@@ -42157,12 +42338,12 @@
     lcr = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "lcr";
-        version = "20180127.1229";
+        version = "20180202.112";
         src = fetchFromGitHub {
           owner = "jyp";
           repo = "lcr";
-          rev = "8a6306a08066aa6b17cba1d1f278cb359d6b6c6a";
-          sha256 = "12fc6k71cly9xznh461sdlfb6vlp0pddvv7p0vdzr03mspw4qa9s";
+          rev = "071d23ee5453741a8724d7f8bfa7f5c20612a29d";
+          sha256 = "05gvij9lgs9hh04wnxb90zx9ncsdjyp36fjbmrqrq07xbkxaw82a";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/29374d3da932675b7b3e28ab8906690dad9c9cbe/recipes/lcr";
@@ -42241,12 +42422,12 @@
     ledger-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "ledger-mode";
-        version = "20180126.1808";
+        version = "20180210.1940";
         src = fetchFromGitHub {
           owner = "ledger";
           repo = "ledger-mode";
-          rev = "e098be20cf603f48dfe18c6237546a8c49e1f97c";
-          sha256 = "140hl7s2gxhh14yx34d9ys4ryqp87qckvcjscqllnc51qmkjwf1r";
+          rev = "980e191e08db0b6719b324b131b3ba042f8487c8";
+          sha256 = "0xb5x9wz7bg39x0xhy5fg3k91vdqym63a4r4p3h6n37rg0d0iwcf";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/1549048b6f57fbe9d1f7fcda74b78a7294327b7b/recipes/ledger-mode";
@@ -42816,12 +42997,12 @@
     lispy = callPackage ({ ace-window, emacs, fetchFromGitHub, fetchurl, hydra, iedit, lib, melpaBuild, swiper, zoutline }:
     melpaBuild {
         pname = "lispy";
-        version = "20180123.1255";
+        version = "20180208.2204";
         src = fetchFromGitHub {
           owner = "abo-abo";
           repo = "lispy";
-          rev = "aac21815d8fe833faf1043ee2ec582f96e56c4e5";
-          sha256 = "1wmgpygadkkyrsxscrxvjdy314qdlrzgs3rg3kvmd5j9nhdiwnnv";
+          rev = "9ac289883012a0c973addb0c8fe4db84259a8019";
+          sha256 = "0gd9d9qid36vbr23npgnr9356av2mlkf13xcx0gq2xxck2p4gl58";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/e23c062ff32d7aeae486c01e29c56a74727dcf1d/recipes/lispy";
@@ -43131,12 +43312,12 @@
     live-py-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "live-py-mode";
-        version = "20180126.2158";
+        version = "20180129.2352";
         src = fetchFromGitHub {
           owner = "donkirkby";
           repo = "live-py-plugin";
-          rev = "465c3f807c3ccd9af0af7032aec40c039d950ac0";
-          sha256 = "1idn0bjxw5sgjb7p958fdxn8mg2rs8yjqsz8k56r9jjzr7z9jdfx";
+          rev = "e0a5627e6591e1cbb9f93aabc44adbdc50b346c9";
+          sha256 = "0dhm7gdd1smlibj5jmzps97kwkpzcigbdp0l26baa2mkc6155y66";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/c7615237e80b46b5c50cb51a3ed5b07d92566fb7/recipes/live-py-mode";
@@ -43695,12 +43876,12 @@
     lsp-haskell = callPackage ({ fetchFromGitHub, fetchurl, haskell-mode, lib, lsp-mode, melpaBuild }:
     melpaBuild {
         pname = "lsp-haskell";
-        version = "20171021.330";
+        version = "20180131.459";
         src = fetchFromGitHub {
           owner = "emacs-lsp";
           repo = "lsp-haskell";
-          rev = "778f816376c0a77d7404a123a5a1683e46394173";
-          sha256 = "00j1b63q611qr76qf4nvkhlblcvbjakgljilwdh973k3zdc6a0v1";
+          rev = "cf3739e96b623fe8b95617561bb29476d7553462";
+          sha256 = "0739kclc6g80r38yjwwsyx7arc0z4jlmp4x7gmf30ijdpn32qb4b";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/1a7b69312e688211089a23b75910c05efb507e35/recipes/lsp-haskell";
@@ -43737,12 +43918,12 @@
     lsp-javacomp = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, lsp-mode, melpaBuild, s }:
     melpaBuild {
         pname = "lsp-javacomp";
-        version = "20171024.1547";
+        version = "20180203.1204";
         src = fetchFromGitHub {
           owner = "tigersoldier";
           repo = "lsp-javacomp";
-          rev = "ed23aaeee27e6253bed5752fb8fbb7a5fa61967c";
-          sha256 = "096rbyv0qwa454p1ns7g0py9lni5r6h1gw85wm5mwr00shjzq23n";
+          rev = "57554723983c5d76c21a7a5c16534066de6dcf23";
+          sha256 = "0n105j1i8gwayfzwvr9d37b9ra35l9prlgx7vqblvv167q4w9d63";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/6b8a1c034554579a7e271409fa72020cfe441f68/recipes/lsp-javacomp";
@@ -43758,12 +43939,12 @@
     lsp-javascript-typescript = callPackage ({ fetchFromGitHub, fetchurl, lib, lsp-mode, melpaBuild }:
     melpaBuild {
         pname = "lsp-javascript-typescript";
-        version = "20180124.2058";
+        version = "20180203.52";
         src = fetchFromGitHub {
           owner = "emacs-lsp";
           repo = "lsp-javascript";
-          rev = "213dd077ec181eb3f5b8139ed02cde82398ed5ea";
-          sha256 = "1zqvpk65m6hfgharjvrmjwp88n5nkvz32ra82k57d3jkgbslxsw6";
+          rev = "8df90bc27852da2cf05951870d94ce7920d8c09f";
+          sha256 = "0pqk8p0z30p0j7lc5i2mvy7vmg8k5hphgwp4djhgm1ickm9pcx20";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/999a4b0cd84e821c7e785ae4e487f32cff5c346b/recipes/lsp-javascript-typescript";
@@ -43779,12 +43960,12 @@
     lsp-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild }:
     melpaBuild {
         pname = "lsp-mode";
-        version = "20180129.409";
+        version = "20180210.441";
         src = fetchFromGitHub {
           owner = "emacs-lsp";
           repo = "lsp-mode";
-          rev = "111fcdb3929e015e95645548686687efabb3c7de";
-          sha256 = "1hanr9njdyc5b6n5awfknb6rxnmskm7vikrpwbg3f6iiq56mzsbg";
+          rev = "a38ce26c9ebd56a690085d29a80f4494843e53c3";
+          sha256 = "0mlnz3aqa40gavb0lr7bzlyzfm58d1c4np546v1401ljdc95fcgi";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/1a7b69312e688211089a23b75910c05efb507e35/recipes/lsp-mode";
@@ -43881,22 +44062,22 @@
           license = lib.licenses.free;
         };
       }) {};
-    lsp-ui = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, flycheck, lib, lsp-mode, markdown-mode, melpaBuild }:
+    lsp-ui = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, flycheck, lib, lsp-mode, melpaBuild }:
     melpaBuild {
         pname = "lsp-ui";
-        version = "20180124.414";
+        version = "20180209.1302";
         src = fetchFromGitHub {
           owner = "emacs-lsp";
           repo = "lsp-ui";
-          rev = "7aeff9326ec7664ab935cb4c4ada6062a0a26981";
-          sha256 = "0v6jg9jna3bnxbkzx8k5d7is4fr0g1dfz6gyqqxpnd1gzjwq15w8";
+          rev = "6a669ca3bb14b48ba61f87e32f3a4eddc95dbf9a";
+          sha256 = "0p4lr98asfhz78pj9mq7m7lk7syfz8w16xhrfv012llr8412g8cw";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/1e4fa7cdf71f49f6998b26d81de9522248bc58e6/recipes/lsp-ui";
           sha256 = "00y5i44yd79z0v00a9lvgixb4mrx9nq5vcgmib70h41ffffaq42j";
           name = "lsp-ui";
         };
-        packageRequires = [ dash emacs flycheck lsp-mode markdown-mode ];
+        packageRequires = [ dash emacs flycheck lsp-mode ];
         meta = {
           homepage = "https://melpa.org/#/lsp-ui";
           license = lib.licenses.free;
@@ -43905,12 +44086,12 @@
     lsp-vue = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, lsp-mode, melpaBuild }:
     melpaBuild {
         pname = "lsp-vue";
-        version = "20171202.917";
+        version = "20180129.1805";
         src = fetchFromGitHub {
           owner = "emacs-lsp";
           repo = "lsp-vue";
-          rev = "9085d6c7646d80728d14bf5e4ec9037dfb91e3d1";
-          sha256 = "1y9gd20rdyxih823b1x8ika7s6mwiki0dggq67r4jdgpd9f5yabg";
+          rev = "faf976ee9b333919653b4b98e2886b488707e866";
+          sha256 = "1d6sw5jsjhwd5bbl2p8k6hdwpg1pmnsmvbq8g33h80qlg05fwj60";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/0d9eb7699630fd7e11f38b4ba278a497633c9733/recipes/lsp-vue";
@@ -43926,12 +44107,12 @@
     lua-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "lua-mode";
-        version = "20180104.626";
+        version = "20180207.1216";
         src = fetchFromGitHub {
           owner = "immerrr";
           repo = "lua-mode";
-          rev = "6c691839b7e784884ae5c390bf1927953cd2bde7";
-          sha256 = "0fm1d85302q79r4zrzmdx4v5c1vvr53g687vm5frf9sv8gg6hx0w";
+          rev = "7909513c056ac85fd637aece6d3773ffa3b9b6cd";
+          sha256 = "0bmsvggmrvcaq6yw856dk9484w5pjpfkkgia0p4w0f5rvvnfr8j3";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/ca7bf43ef8893bf04e9658390e306ef69e80a156/recipes/lua-mode";
@@ -44241,16 +44422,16 @@
     magit = callPackage ({ async, dash, emacs, fetchFromGitHub, fetchurl, ghub, git-commit, let-alist, lib, magit-popup, melpaBuild, with-editor }:
     melpaBuild {
         pname = "magit";
-        version = "20180129.629";
+        version = "20180211.700";
         src = fetchFromGitHub {
           owner = "magit";
           repo = "magit";
-          rev = "275a32b8af950f59324d69c39f01d653948f6481";
-          sha256 = "1cm1ryd4hidaybv323gjbrqpdaicwr18ar7bhzkfjnkakvrb35pj";
+          rev = "10a1f08f39373bfc2ed86858cf02d82bfcdb7be8";
+          sha256 = "1bk1a34yi37gsb6n7a68pkia100q0jyj2x5bs8hkf0q48rh4dvl3";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/0263ca6aea7bf6eae26a637454affbda6bd106df/recipes/magit";
-          sha256 = "03cmja9rcqc9250bsp1wwv94683mrcbnz1gjn8y7v62jlfi5qws5";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/b0a9a6277974a7a38c0c46d9921b54747a85501a/recipes/magit";
+          sha256 = "1wbqz2s1ips0kbhy6jv0mm4vh110m5r65rx0ik11dsqv1fv3hwga";
           name = "magit";
         };
         packageRequires = [
@@ -44586,12 +44767,12 @@
     magithub = callPackage ({ emacs, fetchFromGitHub, fetchurl, ghub-plus, git-commit, lib, magit, markdown-mode, melpaBuild, s }:
     melpaBuild {
         pname = "magithub";
-        version = "20180128.1035";
+        version = "20180209.1711";
         src = fetchFromGitHub {
           owner = "vermiculus";
           repo = "magithub";
-          rev = "f6273604ef87e1b513f69430af50600ee4b20deb";
-          sha256 = "00cwc2qbspqjrxrz00vjfcfx4ydfj7q977d2gffsg2lkjyjspzpp";
+          rev = "eb8a794df0db2e7edea1106a87bf03f94ec7e192";
+          sha256 = "1q7s822ygqc8rz0b1fqgwdjnj5l0fhnqahlnf02aqz5by47sgaqg";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/magithub";
@@ -44922,12 +45103,12 @@
     mandoku = callPackage ({ fetchFromGitHub, fetchurl, git, github-clone, lib, magit, melpaBuild, org }:
     melpaBuild {
         pname = "mandoku";
-        version = "20171220.419";
+        version = "20180207.2320";
         src = fetchFromGitHub {
           owner = "mandoku";
           repo = "mandoku";
-          rev = "f993b7428c7e83efdbc6e6040d3eae9406d9b090";
-          sha256 = "0731w64jxjmphsjpz4fz21h27q4y9afbkbpczspnc90vs1ighn4y";
+          rev = "36fed6ea0ae45b36ef5618d5bd29f4a43c0e2c6d";
+          sha256 = "1qsygc90sclk5r1qxsiszi72sg6ryhiw39vf99ixi0pxayljk8px";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/1aac4ae2c908de2c44624fb22a3f5ccf0b7a4912/recipes/mandoku";
@@ -45864,8 +46045,8 @@
         src = fetchFromGitHub {
           owner = "myTerminal";
           repo = "meta-presenter";
-          rev = "1f8d635301d1f9849416c551bf1530e87e31d235";
-          sha256 = "19y4iwi24p86d64n9075zjrjj6i27vpvwi898qanw1ih7spgpg1q";
+          rev = "4e7aae56e5abf6deaadbda84fd5ec4e3e19c22be";
+          sha256 = "0nb64i9ikkcbb6s21rzc2d5i84dpy0zvqk7f3zynlprzaqy11b7n";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/b73e9424515b3ddea220b786e91c57ee22bed87f/recipes/meta-presenter";
@@ -46321,12 +46502,12 @@
     minizinc-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "minizinc-mode";
-        version = "20180119.2348";
+        version = "20180201.650";
         src = fetchFromGitHub {
           owner = "m00nlight";
           repo = "minizinc-mode";
-          rev = "c6cd9614d84e26065852aeb1942e8339e08e382d";
-          sha256 = "0ypid82lvh5np326csm8y6c9ac7drqj6gdmqyzqbrn1m6lz9xkkl";
+          rev = "2512521ba7f8e263a06db88df663fc6b3cca7e16";
+          sha256 = "1yrawvvn3ndzzrllh408v4a5n0y0n5p1jczdm9r8pbxqgyknbk1n";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/fc86b4ba54fca6f1ebf1ae3557fe564e05c1e382/recipes/minizinc-mode";
@@ -46949,12 +47130,12 @@
     monokai-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "monokai-theme";
-        version = "20180104.429";
+        version = "20180201.553";
         src = fetchFromGitHub {
           owner = "oneKelvinSmith";
           repo = "monokai-emacs";
-          rev = "bb5cbbd5895b8b3fbc6af572b1fd0aacd4988a8a";
-          sha256 = "1f0jl4a3b6i9skbcym0qzpszy620385m947l2ba2wxf1na7rc626";
+          rev = "031849ab863a29e7576535af92b11d535e762440";
+          sha256 = "1xl6b71r0j90n9r96f6hfvd9fzwzwy7rmn44c1p2r76inyxvlyil";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/2bc9ce95a02fc4bcf7bc7547849c1c15d6db5089/recipes/monokai-theme";
@@ -46967,6 +47148,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    monotropic-theme = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "monotropic-theme";
+        version = "20180205.2000";
+        src = fetchFromGitHub {
+          owner = "caffo";
+          repo = "monotropic-theme";
+          rev = "a5dc696e79115f96a2482ba2e01f0569c5e4c4be";
+          sha256 = "17985wdlgz4d45jznl9df34826mm5xc8h5xcar70rdrw4gqp4ccy";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/38222d109ece0030b0bfafb242aa100694b2bfcf/recipes/monotropic-theme";
+          sha256 = "129yqjh4gaab1kjijzkzbw50alzdiwmpv9cl3lsy04m8zk02shl8";
+          name = "monotropic-theme";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/monotropic-theme";
+          license = lib.licenses.free;
+        };
+      }) {};
     monroe = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "monroe";
@@ -47390,12 +47592,12 @@
     mtg-deck-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "mtg-deck-mode";
-        version = "20170925.1338";
+        version = "20180129.1637";
         src = fetchFromGitHub {
           owner = "mattiasb";
           repo = "mtg-deck-mode";
-          rev = "546a62ada70aa89d325cc3941c8c9379a4c21553";
-          sha256 = "1gbgsfd04jdw6jrsp13h13jkkac5ndrn684pl18q0wjgx9kk11b6";
+          rev = "4eeb1a5115d60d064dcd79b9e0dd48619cd2ee4c";
+          sha256 = "16qmqqq7297idr2x4fr22ihhx6z91484x0hpmskbh6fn05bvls2y";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/425fa66cffe7bfda71de4ff2b49e951456bdeae1/recipes/mtg-deck-mode";
@@ -47432,12 +47634,12 @@
     mu4e-alert = callPackage ({ alert, emacs, fetchFromGitHub, fetchurl, ht, lib, melpaBuild, s }:
     melpaBuild {
         pname = "mu4e-alert";
-        version = "20171222.2315";
+        version = "20180211.2319";
         src = fetchFromGitHub {
           owner = "iqbalansari";
           repo = "mu4e-alert";
-          rev = "3095de457ec88e752f83ce086eff4aeb22399980";
-          sha256 = "04y26r7cb0sza8wp45khk8la4mvj4h4ksxfm5z7ry77xi7j2894w";
+          rev = "997ef1bfc7dc09d87f50ece80f0345782065eb92";
+          sha256 = "0pc95w6idvrmdpiq6gmcmi31rmh0d94rfhwjafsxqqimmsm9fk0z";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/mu4e-alert";
@@ -47596,6 +47798,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    multi-run = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, window-layout }:
+    melpaBuild {
+        pname = "multi-run";
+        version = "20180122.709";
+        src = fetchFromGitHub {
+          owner = "sagarjha";
+          repo = "multi-run";
+          rev = "87d9eed414999fd94685148d39e5308c099e65ca";
+          sha256 = "0m4wk6sf01b7bq5agmyfcm9kpmwmd90wbvh7fkhs61mrs86s2zw8";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/e05ad99477bb97343232ded7083fddb810ae1781/recipes/multi-run";
+          sha256 = "1iv4a49czdjl0slp8590f1ya0vm8g2ycnkwrdpqi3b55haaqp91h";
+          name = "multi-run";
+        };
+        packageRequires = [ emacs window-layout ];
+        meta = {
+          homepage = "https://melpa.org/#/multi-run";
+          license = lib.licenses.free;
+        };
+      }) {};
     multi-term = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "multi-term";
@@ -47981,8 +48204,8 @@
         src = fetchFromGitHub {
           owner = "myTerminal";
           repo = "myterminal-controls";
-          rev = "eaa8c82b8e140f4c0f2e286ee14253b76e4639a6";
-          sha256 = "1vy34f8gcaspjmgamz5dbxmjxjiixf0wmhgpr61fwd4vh5rvwcci";
+          rev = "aae4f50f9f22d374eaaac2ce95e522f13dcc8fc0";
+          sha256 = "08xgzrpp5l5d43j1b8ai3d41jzk9i70r2pqdcj53h79ml56bicgp";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/4a82a45d9fcafea0795f832bce1bdd7bc83667e2/recipes/myterminal-controls";
@@ -48228,12 +48451,12 @@
     naquadah-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "naquadah-theme";
-        version = "20160819.121";
+        version = "20180212.440";
         src = fetchFromGitHub {
           owner = "jd";
           repo = "naquadah-theme";
-          rev = "37e822ccea0ff4a6eb79ea6615a1fd6dc6c72d51";
-          sha256 = "1z6fy97x9753fprvrmnmplnqwr6xl8hgvwkpi6fp6awcb0wrza3d";
+          rev = "999056526db5095ce600c83672fc80cb744bd93e";
+          sha256 = "1f10598m4vcpr4md6hpdvv46zi6159rajxyzrrlkiz0g94v8y6rl";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/671afe0ff3889ae8c4b2d7b8617a3a25c16f3f0f/recipes/naquadah-theme";
@@ -48690,12 +48913,12 @@
     ng2-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, typescript-mode }:
     melpaBuild {
         pname = "ng2-mode";
-        version = "20180128.1006";
+        version = "20180206.1128";
         src = fetchFromGitHub {
           owner = "AdamNiederer";
           repo = "ng2-mode";
-          rev = "43179216c08958486ed7a8e7a3766d1df11d38d8";
-          sha256 = "1biww57phq5mcd80is38fnishj3jmj09iwiqkn6j03p53kvgqchb";
+          rev = "00822c2e43ff4793cf030fbbd67f83cfdb689b3a";
+          sha256 = "19qbs0c0q98rp506a8sj7wkigrk8xzv0s87q9bcl5zxk9jx6m304";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/a856ecd8aca2d9232bb20fa7019de9e1dbbb19f4/recipes/ng2-mode";
@@ -49232,6 +49455,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    nordless-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "nordless-theme";
+        version = "20180204.48";
+        src = fetchFromGitHub {
+          owner = "lthms";
+          repo = "nordless-theme.el";
+          rev = "3fb123eaaf7f38d024effdda4b3e88cc66e67300";
+          sha256 = "0i5b7qg97qcgvhk8vv7x5xpwps06q140jndkz4i2rakg5hr3z98g";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/3de9da6cb8c1a75ff1d41a69e156c21be00713b6/recipes/nordless-theme";
+          sha256 = "1ylvqh5hf7asdx2mn57fsaa7ncfgfzq1ss50k9665k32zvv3zksx";
+          name = "nordless-theme";
+        };
+        packageRequires = [];
+        meta = {
+          homepage = "https://melpa.org/#/nordless-theme";
+          license = lib.licenses.free;
+        };
+      }) {};
     nose = callPackage ({ fetchhg, fetchurl, lib, melpaBuild }: melpaBuild {
         pname = "nose";
         version = "20140520.948";
@@ -49255,13 +49499,13 @@
         pname = "notmuch";
         version = "20180104.1635";
         src = fetchgit {
-          url = "git://git.notmuchmail.org/git/notmuch";
-          rev = "12541fea7fe333f7c154a4a12a1d40394c2d6364";
-          sha256 = "1r5a5smg2mc28wy3iq4sp8p0rmpqsi5ajk31hwc9lhldklz2c0nj";
+          url = "https://git.notmuchmail.org/git/notmuch";
+          rev = "a9f1c7c294526afb2a2ac18003a654ea4c780b7b";
+          sha256 = "0pv6rpymhf1m10011hw5plsfz18d7gm10w396dc2rm05c9szffjr";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/b19f21ed7485036e799ccd88edbf7896a379d759/recipes/notmuch";
-          sha256 = "173d1gf5rd4nbjwg91486ibg54n3qlpwgyvkcy4d30jm4vqwqrqv";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/d05fbde3aabfec4efdd19a33fd2b1297905acb5a/recipes/notmuch";
+          sha256 = "0pznpl0aqybdg4b2qypq6k4jac64sssqhgz6rvk9g2nkqhkds1x7";
           name = "notmuch";
         };
         packageRequires = [];
@@ -49722,13 +49966,13 @@
         pname = "ob-axiom";
         version = "20171103.1548";
         src = fetchgit {
-          url = "https://bitbucket.org/pdo/axiom-environment.git";
+          url = "https://bitbucket.org/pdo/axiom-environment";
           rev = "b4f0fa9cd013e107d2af8e2ebedff8a7f40be7b5";
           sha256 = "0p2mg2824mw8l1zrfq5va1mnxg0ib5f960306vvsm6b3pi1w5kv0";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/9f07feb8686c76c330f282320b9f653dc16cadd5/recipes/ob-axiom";
-          sha256 = "0ks0q4ych3770gqds7kmccvx27fay7gfygi3a9n7c01p4snfai8l";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/8b4c6b03c5ff78ce327dcf66b175e266bbc53dbf/recipes/ob-axiom";
+          sha256 = "17qh4hsr3aw4d0p81px3qcbax6dv2zjhyn5n9pxqwcp2skm5vff5";
           name = "ob-axiom";
         };
         packageRequires = [ axiom-environment emacs ];
@@ -49800,27 +50044,6 @@
           license = lib.licenses.free;
         };
       }) {};
-    ob-clojure-literate = callPackage ({ cider, dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, org }:
-    melpaBuild {
-        pname = "ob-clojure-literate";
-        version = "20180111.210";
-        src = fetchFromGitHub {
-          owner = "stardiviner";
-          repo = "ob-clojure-literate";
-          rev = "7acb5d1e9a84c9caa1e8477cdbb60d9a5dbf2eaa";
-          sha256 = "1n5w7c181x5zbkmcvnzk2hxi339p2mfjwlhkxnfh3i20hzgqxci6";
-        };
-        recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/e958745861c9673248955443bcc2c76d504b32f7/recipes/ob-clojure-literate";
-          sha256 = "0jprgnslkc9m404n32rr510is823yr9kziqcw70z828fy7wl2glk";
-          name = "ob-clojure-literate";
-        };
-        packageRequires = [ cider dash emacs org ];
-        meta = {
-          homepage = "https://melpa.org/#/ob-clojure-literate";
-          license = lib.licenses.free;
-        };
-      }) {};
     ob-coffee = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, org }:
     melpaBuild {
         pname = "ob-coffee";
@@ -50199,27 +50422,6 @@
           license = lib.licenses.free;
         };
       }) {};
-    ob-php = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, org }:
-    melpaBuild {
-        pname = "ob-php";
-        version = "20180103.441";
-        src = fetchFromGitHub {
-          owner = "stardiviner";
-          repo = "ob-php";
-          rev = "08b41282fba31abca030a387062c3f1eb25a723f";
-          sha256 = "1anrqqd4g4pq2ngslgkqarxisgmn9i7nggj2m76ny7ga1hxi2agv";
-        };
-        recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/940a22790c9e5fd2f7729c71efad907683cc392c/recipes/ob-php";
-          sha256 = "0n6m6rpd0rsk6idhxs9qf5pb6p9ch2immczj5br7h5xf1bc7x2fp";
-          name = "ob-php";
-        };
-        packageRequires = [ org ];
-        meta = {
-          homepage = "https://melpa.org/#/ob-php";
-          license = lib.licenses.free;
-        };
-      }) {};
     ob-prolog = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "ob-prolog";
@@ -50241,27 +50443,6 @@
           license = lib.licenses.free;
         };
       }) {};
-    ob-redis = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, org }:
-    melpaBuild {
-        pname = "ob-redis";
-        version = "20160411.2013";
-        src = fetchFromGitHub {
-          owner = "stardiviner";
-          repo = "ob-redis";
-          rev = "244a21569499a3d8cb39f651fbf00ce26accf983";
-          sha256 = "1f8qz5bwz5yd3clvjc0zw3yf9m9fh5vn2gil69ay1a2n00qwkq78";
-        };
-        recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/26477b37952bc050d8904929b3a5b027a59842e6/recipes/ob-redis";
-          sha256 = "1xsz4cc8cqx03ckpcwi7dc3l6v4c5mdbby37a9i0n5q6wd4r92mm";
-          name = "ob-redis";
-        };
-        packageRequires = [ org ];
-        meta = {
-          homepage = "https://melpa.org/#/ob-redis";
-          license = lib.licenses.free;
-        };
-      }) {};
     ob-restclient = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, restclient }:
     melpaBuild {
         pname = "ob-restclient";
@@ -50325,27 +50506,6 @@
           license = lib.licenses.free;
         };
       }) {};
-    ob-smiles = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, org, smiles-mode }:
-    melpaBuild {
-        pname = "ob-smiles";
-        version = "20160717.421";
-        src = fetchFromGitHub {
-          owner = "stardiviner";
-          repo = "ob-smiles";
-          rev = "c23c318bf8bbe2e266967388221893fbecdd2fd5";
-          sha256 = "1iz8dli9i027wcg39rfabr6fx2b45waplx9mzkk1ri787rmapkpn";
-        };
-        recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/e377955c0c36459698aae429df0a78e84793798f/recipes/ob-smiles";
-          sha256 = "0d07ph6mlbcwmw0rd18yfd35bx9w3f5mb3nifczjg7xwlm8gd7jb";
-          name = "ob-smiles";
-        };
-        packageRequires = [ org smiles-mode ];
-        meta = {
-          homepage = "https://melpa.org/#/ob-smiles";
-          license = lib.licenses.free;
-        };
-      }) {};
     ob-sml = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, sml-mode }:
     melpaBuild {
         pname = "ob-sml";
@@ -50367,27 +50527,6 @@
           license = lib.licenses.free;
         };
       }) {};
-    ob-spice = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, org, spice-mode }:
-    melpaBuild {
-        pname = "ob-spice";
-        version = "20170801.2222";
-        src = fetchFromGitHub {
-          owner = "stardiviner";
-          repo = "ob-spice";
-          rev = "b296232e28f61366265084fafb2f47876d987069";
-          sha256 = "1s2jyx75xkqbkm9g4i3h1f0rz9ms5dbs7zqavdiswq9mr8qx1kwq";
-        };
-        recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/ob-spice";
-          sha256 = "0nhdcvq7yvprz4323836k507w0g1lh3rdfr6dqrbj29yvsqfw0x2";
-          name = "ob-spice";
-        };
-        packageRequires = [ org spice-mode ];
-        meta = {
-          homepage = "https://melpa.org/#/ob-spice";
-          license = lib.licenses.free;
-        };
-      }) {};
     ob-sql-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "ob-sql-mode";
@@ -50689,8 +50828,8 @@
         src = fetchFromGitHub {
           owner = "OCamlPro";
           repo = "ocp-indent";
-          rev = "20517e96299e147ef349b9e8913f036a6c35399d";
-          sha256 = "12wdqv5fkzrizl8ls9pbbzl6y0rf5pldsrxkfdl8k1ix2a03p8xd";
+          rev = "764d8dfa931f2336fa9f469aea7d38bcb4990723";
+          sha256 = "1h0rgcifhzqxb7glax7b7whxkcrrd1mmvsdn7z2xgwjla3qmx4w2";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/e1af061328b15360ed25a232cc6b8fbce4a7b098/recipes/ocp-indent";
@@ -50832,12 +50971,12 @@
     olivetti = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "olivetti";
-        version = "20171209.644";
+        version = "20180205.2323";
         src = fetchFromGitHub {
           owner = "rnkn";
           repo = "olivetti";
-          rev = "e824a21f5e284bc7e111b6f325258bba8396d9ec";
-          sha256 = "07hz7nj81pj0vwql30ln8isypqyhwv4y36gfzs475hgjim2mvdh2";
+          rev = "6893bef23e576fd776ca69517dbf0981a8dc4b2a";
+          sha256 = "0jxqnc7cwrrl9kw0fng515kl9hblkqkd5yf2gqq7di09q3rccq65";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/697334ca3cdb9630572ae267811bd5c2a67d2a95/recipes/olivetti";
@@ -50983,8 +51122,8 @@
         src = fetchFromGitHub {
           owner = "OmniSharp";
           repo = "omnisharp-emacs";
-          rev = "588b8482685adedbc56933cb13c58d9cc6a82456";
-          sha256 = "1iqwxc19jvcb2gsm2aq59zblg1qjmbxgb2yl3h3aybqp968j3i00";
+          rev = "7a6fe00e841106b17e7554f8a21f8457d12c5197";
+          sha256 = "1vrgj2irm87pykfjyx27a46g5xam7rxwjdfqh4jl6p8cgzgprrrg";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/e327c483be04de32638b420c5b4e043d12a2cd01/recipes/omnisharp";
@@ -51032,12 +51171,12 @@
     on-parens = callPackage ({ dash, emacs, evil, fetchFromGitHub, fetchurl, lib, melpaBuild, smartparens }:
     melpaBuild {
         pname = "on-parens";
-        version = "20150702.1506";
+        version = "20180202.1441";
         src = fetchFromGitHub {
           owner = "willghatch";
           repo = "emacs-on-parens";
-          rev = "16a145bf73550d5000ffbc2725c541a8458d0d3c";
-          sha256 = "1616bdvrf1bawcqgj7balbxaw26waw81gxiw7yspnvpyb009j66y";
+          rev = "7a41bc02bcffd265f8a69ed4b4e0df3c3009aaa4";
+          sha256 = "0pkc05plbjqfxrw54amlm6pzg9gcsz0nvqzprplr6rhh7ss419zn";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/2ea1eb5eb5a40e95ba06b0a4ac89ad8843c9cc2c/recipes/on-parens";
@@ -51513,12 +51652,12 @@
     org-brain = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, org }:
     melpaBuild {
         pname = "org-brain";
-        version = "20180116.2216";
+        version = "20180209.534";
         src = fetchFromGitHub {
           owner = "Kungsgeten";
           repo = "org-brain";
-          rev = "754adb19ee88cba2757f0dd214abc85a6b05491f";
-          sha256 = "1f581785rkvy1qjriwpjc3xqsz2a4jvbzi3ghzz76zz3j36yisln";
+          rev = "7f96d1417fa3b676d402524b2de92447174cc101";
+          sha256 = "1lrvi15qzqbdgkar2mxzsjhna8wbhr95hnym93rwvksgmn8dgivg";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/47480fbae06e4110d50bc89db7df05fa80afc7d3/recipes/org-brain";
@@ -52373,12 +52512,12 @@
     org-noter = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, org }:
     melpaBuild {
         pname = "org-noter";
-        version = "20180129.840";
+        version = "20180210.1836";
         src = fetchFromGitHub {
           owner = "weirdNox";
           repo = "org-noter";
-          rev = "107fae73d5149a774d8c3a5d8a05c7355160388e";
-          sha256 = "04269kll3dfh0jd8s6w6xdp90c9hbyfy68ifv1z30x67mz18chbx";
+          rev = "8841704afc019c0ebd66795343562be8b8fa77f1";
+          sha256 = "1ba2l0nyxxg0x9kn53xif7nzn4di0dp3dkni6qihns9v0n8vl56s";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/4a2bc0d95dc2744277d6acbba1f7483b4c14d75c/recipes/org-noter";
@@ -52785,12 +52924,12 @@
     org-ref = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, helm, helm-bibtex, hydra, ivy, key-chord, lib, melpaBuild, pdf-tools, s }:
     melpaBuild {
         pname = "org-ref";
-        version = "20180129.719";
+        version = "20180207.1846";
         src = fetchFromGitHub {
           owner = "jkitchin";
           repo = "org-ref";
-          rev = "3b16a4f7c98bcccd54a2d41d5ff7b5796b87a42d";
-          sha256 = "0qiflgczhvav2wlgpy6fxm7vdh21ai75hdh00qs8b6d0d4i2mqhy";
+          rev = "e828a32d00b24af2c6c657481c3ad163de6c8e02";
+          sha256 = "0inmayxdhfdh5lnjzqxkm65f160p2inc0mz7m254wm81z50033km";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/550e4dcef2f74fbd96474561c1cb6c4fd80091fe/recipes/org-ref";
@@ -54170,12 +54309,12 @@
     ox-epub = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, org }:
     melpaBuild {
         pname = "ox-epub";
-        version = "20171105.0";
+        version = "20171202.1713";
         src = fetchFromGitHub {
           owner = "ofosos";
           repo = "ox-epub";
-          rev = "93bd7b42ad4a70d7008470820266546d261222d6";
-          sha256 = "078ihlpwajmzb0l4h5pqqx1y9ak7qwbrh7kfrqwd0jn114fah1yd";
+          rev = "3d958203e169cbfb2204c43cb4c5543befec0b9d";
+          sha256 = "057sqmvm8hwkhcg3yd4i8zz2xlqsqrpyiklyiw750s3i5mxdn0k7";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/c3ac31dfef00e83fa6b716ea006f35afb5dc6cd5/recipes/ox-epub";
@@ -54233,12 +54372,12 @@
     ox-hugo = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, org }:
     melpaBuild {
         pname = "ox-hugo";
-        version = "20180129.1108";
+        version = "20180211.2258";
         src = fetchFromGitHub {
           owner = "kaushalmodi";
           repo = "ox-hugo";
-          rev = "ebb670b73be1b8759ce093c4101b198f12b5cea2";
-          sha256 = "0ks6q0fgbyz0bq222dqh88fivkr150hlhb5kkibdr644bjwmcwcy";
+          rev = "a8ae44e692f30fa7d0c76c21ad2dd6ebf65da700";
+          sha256 = "0856n634k43ingr7smcwvjjzd9h96mvh0d767q7qcg6h2f5lmgg7";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/1e1240bb7b5bb8773f804b987901566a20e3e8a9/recipes/ox-hugo";
@@ -54338,12 +54477,12 @@
     ox-minutes = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "ox-minutes";
-        version = "20170323.835";
+        version = "20180202.934";
         src = fetchFromGitHub {
           owner = "kaushalmodi";
           repo = "ox-minutes";
-          rev = "ad9632f35524ac546c6d55dfa827e8597669e1e1";
-          sha256 = "07knwl6d85sygqyvc7pm23y7v4nraiq1wl1b7szkzi2knd8wzi0s";
+          rev = "27c29f3fdb9181322ae56f8bace8d95e621230e5";
+          sha256 = "10rw12gmg3d6fvkqijmjnk5bdpigvm8fy34435mwg7raw0gmlq75";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/162d0dacbb7252508147edb52fe33b1927a6bd69/recipes/ox-minutes";
@@ -54653,12 +54792,12 @@
     package-build = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "package-build";
-        version = "20171127.902";
+        version = "20180205.1521";
         src = fetchFromGitHub {
           owner = "melpa";
           repo = "package-build";
-          rev = "fc706968dc0bb60e06c5d21025a6ea82d3279e96";
-          sha256 = "020cafc6mihkx6kzhlbxncyb8v7i3zs3l7gydivb6mhm5w36614q";
+          rev = "d6f926e3688d1c8d3c9d06cbfdd5a31f85accf00";
+          sha256 = "072dlzskl0w4xcnrzgy36gzn4sla4hw84yr82rv04akb9mg4ya9m";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/948fb86b710aafe6bc71f95554655dfdfcab0cca/recipes/package-build";
@@ -54965,6 +55104,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    panda-theme = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "panda-theme";
+        version = "20180203.2318";
+        src = fetchFromGitHub {
+          owner = "jamiecollinson";
+          repo = "emacs-panda-theme";
+          rev = "f93ad6ded20d71cab9bf29a0c7040e07e1ba4f05";
+          sha256 = "1y9yppkprbnqf59p94kkpxsma2s7z8cp195na05mdgcs0pmbs6l7";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/a90ca1275ceab8e1ea4fdfa9049fbd24a5fd0bf5/recipes/panda-theme";
+          sha256 = "1q3zp331hz8l54p8ym9jrs4f36aj15r8aka6bqqnalnk237xqxl7";
+          name = "panda-theme";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/panda-theme";
+          license = lib.licenses.free;
+        };
+      }) {};
     pandoc = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "pandoc";
@@ -55035,8 +55195,8 @@
         src = fetchFromGitHub {
           owner = "cadadr";
           repo = "elisp";
-          rev = "41045e36a31782ecdfeb49918629fc4af94876e7";
-          sha256 = "0isvmly7pslb9q7nvbkdwfja9aq9wa73azbncgsa63a2wxmwjqac";
+          rev = "497c7e68df5e3b6b8c3ebaaf6edfce6b2d29b616";
+          sha256 = "1j15dfg1mr21vyf7c9h3dij1pnikwvmxr3rs0vdrx8lz9x321amf";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/a7ea18a56370348715dec91f75adc162c800dd10/recipes/paper-theme";
@@ -55218,12 +55378,12 @@
     parinfer = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "parinfer";
-        version = "20170710.821";
+        version = "20180208.1751";
         src = fetchFromGitHub {
           owner = "DogLooksGood";
           repo = "parinfer-mode";
-          rev = "23ac701e2a1a1364ca96d267437c3413986a4497";
-          sha256 = "1kbwmdhv8fpw613yk8sgh3yz4rcrh2aygqkv3c46d5fr0xm04a80";
+          rev = "4e0d585e85a0e27c7703dc6c6edbadc1b4ce1ce0";
+          sha256 = "0cq1jkizivjkr0mq0fmv0i9vp01g00w0l500s8r25v6npzjmgq6j";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/470ab2b5cceef23692523b4668b15a0775a0a5ba/recipes/parinfer";
@@ -55323,12 +55483,12 @@
     pass = callPackage ({ emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, password-store, password-store-otp }:
     melpaBuild {
         pname = "pass";
-        version = "20180109.201";
+        version = "20180201.451";
         src = fetchFromGitHub {
           owner = "NicolasPetton";
           repo = "pass";
-          rev = "855e89446676f03065ed01e4a5c8dfba5eca3610";
-          sha256 = "0s784pvv8jxiicvqcb9x0nynnpp0m431vw835qhp1pi1y4cfbbf8";
+          rev = "da08fed8dbe1bac980088d47b01f90154dbb8d8b";
+          sha256 = "1j5fdcqmqw62zvmwd80bjvkrr5vg59l5k6673hvvhjx77c8nvidv";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/428c2d53db69bed8938ec3486dfcf7fc048cd4e8/recipes/pass";
@@ -55432,8 +55592,8 @@
         src = fetchFromGitHub {
           owner = "zx2c4";
           repo = "password-store";
-          rev = "bd1cadd5620279b5ee781434b4f0731eb9ad730d";
-          sha256 = "017na2x0hrx4837w5xky3qnzrq3a36fi3mnjpdrv92pr06hbnc4n";
+          rev = "ffef92ee0ed10551b20521f2d6e5637c8f9da798";
+          sha256 = "12j2fjrhxpgha1ay0r4c5cjc6d16s350iclyrvcma35y5dqih2n9";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/207f8ec84572176749d328cb2bbc4e87c36f202c/recipes/password-store";
@@ -56707,12 +56867,12 @@
     php-mode = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "php-mode";
-        version = "20180128.843";
+        version = "20180211.751";
         src = fetchFromGitHub {
           owner = "ejmr";
           repo = "php-mode";
-          rev = "ff86ba6e5e9b9b27539eeec61a4adde65bb59f6c";
-          sha256 = "0nh9sw9ykbgw8ljs3cqcx3c8aq00zz6ywlin4l3sjbhrgc2lpdab";
+          rev = "0d7f970dfffc6532814b5f2290d59391e1cabb78";
+          sha256 = "16dvhamcy8a4c4g9k7vxgqaic1wz03adshvhbh4nqflwwyzz7ldp";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/7cdbc35fee67b87b87ec72aa00e6dca77aef17c4/recipes/php-mode";
@@ -57082,6 +57242,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    pipenv = callPackage ({ emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, s }:
+    melpaBuild {
+        pname = "pipenv";
+        version = "20180207.1216";
+        src = fetchFromGitHub {
+          owner = "pwalsh";
+          repo = "pipenv.el";
+          rev = "cb10661cb11bed9f781c2aef01708f3304f83de1";
+          sha256 = "1m8pdn3vyrzna0a1adwm4s22zgykr6cr9pp9p1v6q1ar80hxchrx";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/d46738976f5dfaf899ee778b1ba6dcee455fd271/recipes/pipenv";
+          sha256 = "110ddg6yjglp49rgn1ck41rl97q92nm6zx86mxjmcqq35cxmc6g1";
+          name = "pipenv";
+        };
+        packageRequires = [ emacs f s ];
+        meta = {
+          homepage = "https://melpa.org/#/pipenv";
+          license = lib.licenses.free;
+        };
+      }) {};
     pippel = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s }:
     melpaBuild {
         pname = "pippel";
@@ -57397,6 +57578,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    playground = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "playground";
+        version = "20180207.1011";
+        src = fetchFromGitHub {
+          owner = "akirak";
+          repo = "emacs-playground";
+          rev = "7e9452ddecc9560ed79cc13af4fe5046996549bb";
+          sha256 = "1fbcyds94g0dllr2iq1mf6mxq6300160063zj8r4p3gp3h370sgf";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/f062a74fe1746129879ad19c1735621f58509d33/recipes/playground";
+          sha256 = "1xjmxkl8h4l87fvv1sr478r6mkmy9gkzw2fxmzqn5fcsahzkyg4d";
+          name = "playground";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/playground";
+          license = lib.licenses.free;
+        };
+      }) {};
     plenv = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "plenv";
@@ -58117,15 +58319,36 @@
           license = lib.licenses.free;
         };
       }) {};
+    posframe = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "posframe";
+        version = "20180212.136";
+        src = fetchFromGitHub {
+          owner = "tumashu";
+          repo = "posframe";
+          rev = "2073a1f7480aaee8a21405edf44ba28888f64aff";
+          sha256 = "0in8nvdgjaj89rg2ckq828vpfpfswj9830zghi7xsky74wysc00k";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/fa3488f2ede1201faf4a147313456ed90271f050/recipes/posframe";
+          sha256 = "02chwkc7gn7fxaaxsz9msmrhrd62bji5hhb71kdm019x8d84z06w";
+          name = "posframe";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/posframe";
+          license = lib.licenses.free;
+        };
+      }) {};
     postcss-sorting = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "postcss-sorting";
-        version = "20170531.1858";
+        version = "20180211.156";
         src = fetchFromGitHub {
           owner = "P233";
           repo = "postcss-sorting.el";
-          rev = "1320d74abd8ee7f0a09b5f7920d554650a7047a6";
-          sha256 = "0071al1nwqazv8rhr7qm799rmizbqwgcrb5in3lm0sz88fbs9vnk";
+          rev = "deb0c935d2904c11a965758a9aee5a0e905f21fc";
+          sha256 = "03kng7i09px5vizvmmrar7rj3bk27y43bi8hlzxax0ja27k0c66c";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9fae97430f211786f615f7450936f823e2a04ec4/recipes/postcss-sorting";
@@ -58309,12 +58532,12 @@
     preseed-generic-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "preseed-generic-mode";
-        version = "20170802.1753";
+        version = "20180209.2100";
         src = fetchFromGitHub {
           owner = "suntong";
           repo = "preseed-generic-mode";
-          rev = "341d85f8ecdc8834956a0352ece542f45def88db";
-          sha256 = "1p486absi0mlcangpbh6hs36wvlmm9s6f4ag0lzmw7w3ikhp88kn";
+          rev = "3aa8806c4a659064baa01751400c53fbaf847f66";
+          sha256 = "02yb5xkgwqxpwghhjmxf2gx0faifi04w2jd8cvfsiwzwqmqyhmv7";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/7fabdb05de9b8ec18a3a566f99688b50443b6b44/recipes/preseed-generic-mode";
@@ -59194,8 +59417,8 @@
         src = fetchFromGitHub {
           owner = "google";
           repo = "protobuf";
-          rev = "da6b07a2e58cf6b6d5326b1f538e902aab3de5be";
-          sha256 = "00baxp6nh6lskc0w5mm4w7m0pd0z6ai2sbpcl9ylcajqw0n4kknq";
+          rev = "e34ec6077af141dd5dfc1c334ecdcce3c6b51612";
+          sha256 = "15hvnhkj2ias3h9zkg713p0gixqpnhdxvjp6msbvnm8k99qxccw6";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/b4e7f5f641251e17add561991d3bcf1fde23467b/recipes/protobuf-mode";
@@ -59284,12 +59507,12 @@
     psession = callPackage ({ async, cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "psession";
-        version = "20171107.2313";
+        version = "20180202.44";
         src = fetchFromGitHub {
           owner = "thierryvolpiatto";
           repo = "psession";
-          rev = "d087644db226e2c66481d3c248e26afa9e4eb670";
-          sha256 = "1hb8cs8kkqpd96fb5dc8fysgg29fvay0ky83n9nawwzq516396ag";
+          rev = "0d5091ae1090bad41d8e10a2f3f94a9e87711610";
+          sha256 = "1h60j33nygivwa9hgn98ibyvxmxr02p338iq80z0nhqqkhzg24rp";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/669342d2b3e6cb622f196571d776a98ec8f3b1d3/recipes/psession";
@@ -59853,8 +60076,8 @@
         src = fetchFromGitHub {
           owner = "proofit404";
           repo = "pyenv-mode";
-          rev = "215b7f0ed3847e0c844adbff7d9b19057aa7c820";
-          sha256 = "0wb9xgpp9bc045kkw0jg14qnxa1y7ydsv1zw4nmy0mw7acxpcjgn";
+          rev = "eabb1c66f9e0c0500fef4d089508aad246d81dc0";
+          sha256 = "1zmgm24d6s56jc4ix61058p1k0h95vdvdllr7fh1k3bq4mw22qn3";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/acc9b816796b9f142c53f90593952b43c962d2d8/recipes/pyenv-mode";
@@ -59930,22 +60153,22 @@
           license = lib.licenses.free;
         };
       }) {};
-    pyim = callPackage ({ async, cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, popup, pyim-basedict }:
+    pyim = callPackage ({ async, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, popup, pyim-basedict }:
     melpaBuild {
         pname = "pyim";
-        version = "20180128.405";
+        version = "20180206.1419";
         src = fetchFromGitHub {
           owner = "tumashu";
           repo = "pyim";
-          rev = "37be07e2e585d1cb5964d7187fca22e863714056";
-          sha256 = "1kgf363a7g7kpy32qw0n7iwlpkr93k4g6h84r3f0g58d8ckargm3";
+          rev = "c670df2a338ca956b6103fd388f81a551bfc33f8";
+          sha256 = "1pkjwcwz6xagamigsv25bxydda1yxzphw0xfclpi21raqnr9f1s6";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/151a0af91a58e27f724854d85d5dd9668229fe8d/recipes/pyim";
           sha256 = "1ly4xhfr3irlrwvv20j3kyz98g7barridi9n8jppc0brh2dlv98j";
           name = "pyim";
         };
-        packageRequires = [ async cl-lib emacs popup pyim-basedict ];
+        packageRequires = [ async emacs popup pyim-basedict ];
         meta = {
           homepage = "https://melpa.org/#/pyim";
           license = lib.licenses.free;
@@ -60063,8 +60286,8 @@
         src = fetchFromGitHub {
           owner = "PyCQA";
           repo = "pylint";
-          rev = "60d471c36f0f390b4f51744eacd73ed99aae164a";
-          sha256 = "07bwknfcf148vp6hs9jq3f2ixkkiwwg1xy9jck4disfvym81kqz3";
+          rev = "5e79774c5028eb492e59bed92d25088b081cf2db";
+          sha256 = "14nxl62cnzab0nrf1j45a9p55sqmcy9mgmkh1wv9lb0v1fyi1x3k";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/a073c91d6f4d31b82f6bfee785044c4e3ae96d3f/recipes/pylint";
@@ -60077,6 +60300,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    pynt = callPackage ({ deferred, ein, emacs, epc, fetchFromGitHub, fetchurl, helm, lib, melpaBuild }:
+    melpaBuild {
+        pname = "pynt";
+        version = "20180203.2100";
+        src = fetchFromGitHub {
+          owner = "ebanner";
+          repo = "pynt";
+          rev = "76fa85dd0c791a6493d59bd564ce5f6ec20ab40d";
+          sha256 = "06rhaqf5wkwk6xl8mp2kyyncnyjclvykal06iqj9sbd4kn5nnq5p";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/fdb297084188a957a46dcd036e65d9d893044bea/recipes/pynt";
+          sha256 = "07c0zc68r3pskn3bac3a8x5nrsykl90a1h22865g3i5vil76vvg3";
+          name = "pynt";
+        };
+        packageRequires = [ deferred ein emacs epc helm ];
+        meta = {
+          homepage = "https://melpa.org/#/pynt";
+          license = lib.licenses.free;
+        };
+      }) {};
     pytest = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, s }:
     melpaBuild {
         pname = "pytest";
@@ -60290,12 +60534,12 @@
     pythonic = callPackage ({ cl-lib ? null, dash, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, s }:
     melpaBuild {
         pname = "pythonic";
-        version = "20171219.810";
+        version = "20180208.214";
         src = fetchFromGitHub {
           owner = "proofit404";
           repo = "pythonic";
-          rev = "ce9c45564efa5553f6268c34f5f1ca2dfcb4d4da";
-          sha256 = "0kv9iv3d5jdrl9c5pnay6lj3if3a0l3f8gc01mms7b8xdpk37xr7";
+          rev = "e8102636cdd44a65638e3752fac9834a4ea87504";
+          sha256 = "1v8qq9g9hdyia2hjkwwhsaikz528xkcirqpkgv6m9glbd3831h21";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/5589c55d459f15717914061d0f0f4caa32caa13c/recipes/pythonic";
@@ -60731,12 +60975,12 @@
     railscasts-reloaded-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "railscasts-reloaded-theme";
-        version = "20170314.146";
+        version = "20180131.2246";
         src = fetchFromGitHub {
           owner = "thegeorgeous";
           repo = "railscasts-reloaded-theme";
-          rev = "bd6e385752c89760fdee7bdf331e24d1d80ee7e9";
-          sha256 = "17vr2mbz1v20w7r52iqb7hicy131yaqhifbksvknx8xnm6z27pnm";
+          rev = "6312f01470dcc73537dbdaaccabd59c4d18d23a9";
+          sha256 = "1fqpqgkpn36kj3fb4na0w4cjwln05rvy6w1q5czas8z37rk2bs33";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9817851bd06cbae30fb8f429401f1bbc0dc7be09/recipes/railscasts-reloaded-theme";
@@ -60836,12 +61080,12 @@
     rake = callPackage ({ cl-lib ? null, dash, f, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "rake";
-        version = "20170921.801";
+        version = "20180212.208";
         src = fetchFromGitHub {
           owner = "asok";
           repo = "rake";
-          rev = "a27322262ebcce7765574b577000f6f939400206";
-          sha256 = "1fzlll8s5vri5hmqsx5ilbrms73b0rsn3k6m5dgq6rhgn5z5k6r1";
+          rev = "9c204334b03b4e899fadae6e59c20cf105404128";
+          sha256 = "09k2fqkmqr6g19rvqr5x2kpj1cn3wkncxg50hz02vmsrbgmzmnja";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/bf0f84698dda02a5b84a244ee29a23a6faa9de68/recipes/rake";
@@ -61319,12 +61563,12 @@
     realgud = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, load-relative, loc-changes, melpaBuild, test-simple }:
     melpaBuild {
         pname = "realgud";
-        version = "20180115.127";
+        version = "20180207.1330";
         src = fetchFromGitHub {
           owner = "rocky";
           repo = "emacs-dbgr";
-          rev = "a5853d53a63e8a23b7b4c2ae0faf575623637c8d";
-          sha256 = "0yalj4nn42g32xjr2s5hvlhinyhz1jjyx74494c018prybs16z75";
+          rev = "251eb8c971b2a706767326f4f8c6fc5221dd6bd8";
+          sha256 = "0w00j3m73lwkwr2jv1bw8glbx50xk1h5vqnpb26zqk54nz310lw1";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/7ca56f05df6c8430a5cbdc55caac58ba79ed6ce5/recipes/realgud";
@@ -61511,6 +61755,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    recentf-remove-sudo-tramp-prefix = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "recentf-remove-sudo-tramp-prefix";
+        version = "20180204.2156";
+        src = fetchFromGitHub {
+          owner = "ncaq";
+          repo = "recentf-remove-sudo-tramp-prefix";
+          rev = "6d23ebc3f52b0a66236c171c45cc77a4d3aba541";
+          sha256 = "0rzs9fmy1iqips6px0v57wnplbxmm3sbnk6xcszwhkwwp563hk32";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/0bf1761715ee4917ba0823adbda03859d5b8131a/recipes/recentf-remove-sudo-tramp-prefix";
+          sha256 = "01kdpx7kqd39a5hjym5plcj5d8szzghigq9mq186mggayg8q44cr";
+          name = "recentf-remove-sudo-tramp-prefix";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/recentf-remove-sudo-tramp-prefix";
+          license = lib.licenses.free;
+        };
+      }) {};
     recompile-on-save = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "recompile-on-save";
@@ -61661,12 +61926,12 @@
     redprl = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "redprl";
-        version = "20180112.838";
+        version = "20180207.1002";
         src = fetchFromGitHub {
           owner = "RedPRL";
           repo = "sml-redprl";
-          rev = "6737a3dba0501aeb275c1e5ee8833ee3a9a35845";
-          sha256 = "0vrrwiz02vi21h11907lhbbkbl367nqd7ccqjpv2g6rsswsfrnpy";
+          rev = "113c07f5b7ae112d7e199aa33665352852ac7f12";
+          sha256 = "106b8nmhdwwpg6l4p9s3jm55r2b9zlj49iklp7qfbjb2wv6qci8n";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/06e7371d703ffdc5b6ea555f2ed289e57e71e377/recipes/redprl";
@@ -61724,12 +61989,12 @@
     refine = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, list-utils, loop, melpaBuild, s }:
     melpaBuild {
         pname = "refine";
-        version = "20170322.1527";
+        version = "20180205.956";
         src = fetchFromGitHub {
           owner = "Wilfred";
           repo = "refine";
-          rev = "55984dbd570c361e7d56d85f2d4ecfbcc567bda1";
-          sha256 = "0amj5i69cgk0p0c3wlm68dgrav8in5n19msglnks210mbfd1vzhj";
+          rev = "6b432bef019e7af38ee7145956fa28d512256420";
+          sha256 = "0sf70cb3ahz42pb7lyp380w4k3698z6in9ng10pm47dv7j660llq";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/b111879ea0685cda88c758b270304d9e913c1391/recipes/refine";
@@ -62878,12 +63143,12 @@
     rtags = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "rtags";
-        version = "20180107.2358";
+        version = "20180130.942";
         src = fetchFromGitHub {
           owner = "Andersbakken";
           repo = "rtags";
-          rev = "53e74892e8bd15baa4d1bd1d640dcabcba9667ee";
-          sha256 = "0ynhx1cyxvrmkadb8h81xrhxvf9wssq74xk236dhl7q1mqagnjaf";
+          rev = "2b0c88cc470b06b65232c23df4b6fbfc4b534580";
+          sha256 = "047w0khlcawwr9rz7ss52x9jzam4pdqd1cwgx7nqiyv3cd47xfsy";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/rtags";
@@ -63071,8 +63336,8 @@
         src = fetchFromGitHub {
           owner = "purcell";
           repo = "ruby-hash-syntax";
-          rev = "bc05c3130a5d3237f04c6064297e56de5f73887d";
-          sha256 = "1jwvyj3kqchd40h37m75ydl0gjrbm873dhfn1grqg4sgk60hr414";
+          rev = "90e0fc89a2b28c527fcece7ee90d5783694a4406";
+          sha256 = "1lkicxingcvs4inxvkrpxknylf09a506plbzx6bfiq9dicsnlw14";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/c7d21a43a4bf267507bdc746ec9d0fd82049c0af/recipes/ruby-hash-syntax";
@@ -63190,15 +63455,36 @@
           license = lib.licenses.free;
         };
       }) {};
+    rum-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "rum-mode";
+        version = "20180126.1622";
+        src = fetchFromGitHub {
+          owner = "rumlang";
+          repo = "rum-mode";
+          rev = "893b1a26244ef6ea82833a9afbc13cb82c0cfb53";
+          sha256 = "0lgahv25a9b2dfgkcm9ipyziiqnr3sb9l2dvzm35khwf3m8dwxgq";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/0c9f8ce2dee376f1f34e89e9642c472a148fca77/recipes/rum-mode";
+          sha256 = "1838w8rk5pgp1hn7a0m83mfw9jin4qv5mkyl68hl3gj7g9lhn7sd";
+          name = "rum-mode";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/rum-mode";
+          license = lib.licenses.free;
+        };
+      }) {};
     run-stuff = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "run-stuff";
-        version = "20170813.1957";
+        version = "20180208.2348";
         src = fetchFromGitHub {
           owner = "ideasman42";
           repo = "emacs-run-stuff";
-          rev = "2e23a78c26f62141142c743febd57ec54c78c0e3";
-          sha256 = "04m7hpda5hbmr0dni4cnpdjxwzk3sygpr5m158gswhbwh2p4r0j4";
+          rev = "ed42a7bc9a197ccf1ca87f9937bf98f0a9ed3f92";
+          sha256 = "1w49v868n3723q6887y4bc5q8spd7xync5d581vvxdpi75qgvr0z";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/0d6e9ce2acd859b887f7e161f4b9969be1a0b8ef/recipes/run-stuff";
@@ -63421,6 +63707,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    s3ed = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, seq }:
+    melpaBuild {
+        pname = "s3ed";
+        version = "20180204.549";
+        src = fetchFromGitHub {
+          owner = "mattusifer";
+          repo = "s3ed";
+          rev = "13503cb057bed29cb00a14dffe4472b5cb7748ad";
+          sha256 = "1ak5nmay12s4ipmvm1a36kyny05xhzmj7wp6dry391db9n7g2wy0";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/32ba78167bd6908b49f340f6da48643ac38f25f2/recipes/s3ed";
+          sha256 = "08scv3aqnidz28rad5npz7b4pz9dx05rs72qkp3ybkk2vhqf2qwa";
+          name = "s3ed";
+        };
+        packageRequires = [ dash emacs seq ];
+        meta = {
+          homepage = "https://melpa.org/#/s3ed";
+          license = lib.licenses.free;
+        };
+      }) {};
     sackspace = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "sackspace";
@@ -63722,8 +64029,8 @@
         src = fetchFromGitHub {
           owner = "openscad";
           repo = "openscad";
-          rev = "b635c493875e43e57102eb54bc80d008e3ca85b5";
-          sha256 = "1vx7ybj4p5smal2sxa4j96dxfgzw184xxqn9m8y2s5lpwlndpz49";
+          rev = "ec8aded3241766dda3b89e26fa914d07562de429";
+          sha256 = "0lh9zlic3iyhxbbsa0pdxl96gi4s8z7x7nphr8hlzl4if3zb5fg0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/2d27782b9ac8474fbd4f51535351207c9c84984c/recipes/scad-mode";
@@ -64179,12 +64486,12 @@
     sdcv = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, popup, pos-tip, showtip }:
     melpaBuild {
         pname = "sdcv";
-        version = "20171002.210";
+        version = "20180211.833";
         src = fetchFromGitHub {
           owner = "stardiviner";
           repo = "sdcv.el";
-          rev = "1aad9defb871dc07e27f603092bb81413be54cf2";
-          sha256 = "1ij7inm1f59hmn9s1iqnywk1acfm0pqiim2s36vwrljy9lnb4ls8";
+          rev = "7cb1f8ec0fa4bb25669534d62bff58df38a992a8";
+          sha256 = "09i7zsizwq5k79wi5sgcfqdlbx0nazrnw3nd6hkn2vfrcffb7pf1";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/173e233b2dacaaf54d92f3bcc06e54d068520dd4/recipes/sdcv";
@@ -64430,12 +64737,12 @@
     semi = callPackage ({ fetchFromGitHub, fetchurl, flim, lib, melpaBuild }:
     melpaBuild {
         pname = "semi";
-        version = "20160816.239";
+        version = "20180204.1448";
         src = fetchFromGitHub {
           owner = "wanderlust";
           repo = "semi";
-          rev = "6b9c62a76f22caf1476c837ee1976eaf0eaf38e7";
-          sha256 = "0h0f6w13kiyy90vnsa4jlfdlsnd04wq6b0vrbmz74q1krfs8b0kz";
+          rev = "44aa82ecf78273d8ff4c84f2121b885fb7149f41";
+          sha256 = "1wl12gsz9pn4wzgbffv3ymr49kcxjggc2jx19kxqyjmwdnw004yf";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/e78849c2d1df187b7f0ef4c34985a341e640ad3e/recipes/semi";
@@ -65543,12 +65850,12 @@
     simple-httpd = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "simple-httpd";
-        version = "20171004.938";
+        version = "20180205.1031";
         src = fetchFromGitHub {
           owner = "skeeto";
           repo = "emacs-web-server";
-          rev = "e7775d3bc5c6b73255814d0a62dc954e23a12c15";
-          sha256 = "0pjhxhzzxrpcczwvd7b6a6q1nfmsr6m6mnlxn13nwf3r270grz87";
+          rev = "be73a176a19fff8260369652f688a316e652fc03";
+          sha256 = "1ifl1qsg6vxxmj3vysrvw94nn31x8krydin42vpp35w6pspx9f0z";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/7fabdb05de9b8ec18a3a566f99688b50443b6b44/recipes/simple-httpd";
@@ -65585,12 +65892,12 @@
     simple-paren = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "simple-paren";
-        version = "20180104.1016";
+        version = "20180205.1141";
         src = fetchFromGitHub {
           owner = "andreas-roehler";
           repo = "simple-paren";
-          rev = "6a8c33443a1e8d502d272584a4a09b23a2342679";
-          sha256 = "01lr9rndk5l2ssdqvrxikwhl9sswcp3hn233bjsq9kv6i5f9r8ca";
+          rev = "f5cc9b4325a07efe92379a11a1a61035c9a1e8c4";
+          sha256 = "1p931vqdnh6agrrzxf55x34ikb1x53mz1a17kskzlqchlzfmc3da";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/5e8886feb4a034fddd40d7381508b09db79f608f/recipes/simple-paren";
@@ -65858,12 +66165,12 @@
     slack = callPackage ({ alert, circe, emojify, fetchFromGitHub, fetchurl, lib, melpaBuild, oauth2, request, websocket }:
     melpaBuild {
         pname = "slack";
-        version = "20180125.450";
+        version = "20180209.1923";
         src = fetchFromGitHub {
           owner = "yuya373";
           repo = "emacs-slack";
-          rev = "8b92582a1b7567bd85de2996e5883982ef9c2f1b";
-          sha256 = "1h7bd8dvcw0sqknh5wdnvci47l5ffhj539sz2vjf90fvmqhf51id";
+          rev = "02ee1d7339e48c64946041f6f4e09447c3f53e82";
+          sha256 = "0grx95xxf314m2k35m1kf20l2pwc6j11ibvrngx4pis7wqwjas3h";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/f0258cc41de809b67811a5dde3d475c429df0695/recipes/slack";
@@ -65921,12 +66228,12 @@
     slime = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, macrostep, melpaBuild }:
     melpaBuild {
         pname = "slime";
-        version = "20180126.1033";
+        version = "20180208.323";
         src = fetchFromGitHub {
           owner = "slime";
           repo = "slime";
-          rev = "ae3b7e7ed63a850e9cb5130e0ca5544150d74156";
-          sha256 = "1q27jxagllhmnc44b3rg1lkas1w2q6xv91j3f020gvasnzmbv5gh";
+          rev = "8511e9b1180589c307909c623aa5f558f697f203";
+          sha256 = "0dbnmvrrd84syn96jz90rgddb3n1cfza2rmzw7p57fzknzmv349w";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/14c60acbfde13d5e9256cea83d4d0d33e037d4b9/recipes/slime";
@@ -66089,12 +66396,12 @@
     sly = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "sly";
-        version = "20180128.435";
+        version = "20180208.226";
         src = fetchFromGitHub {
           owner = "capitaomorte";
           repo = "sly";
-          rev = "f6dda1ec006ee67122d864e6069e85194a628083";
-          sha256 = "1g92nksifwh7yvrwkwqzrhrficrlkyi04nw9ydrf8mkvn3svybgy";
+          rev = "cbf84c36c4eca8b032e3fd16177a7bc02df3ec4c";
+          sha256 = "13dyhsravn591p7g6is01mp2ynzjnnj7pwgi57r6xqmd4611y9vh";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/79e7213183df892c5058a766b5805a1854bfbaec/recipes/sly";
@@ -66613,12 +66920,12 @@
     smartparens = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "smartparens";
-        version = "20180129.939";
+        version = "20180212.202";
         src = fetchFromGitHub {
           owner = "Fuco1";
           repo = "smartparens";
-          rev = "05591f370ca31edc6c5ff0a762f8b03ebc1309df";
-          sha256 = "1lb4j0gddzk6wb0wslhmvm09r2q1rl7vfwjraldyfzkfwspmb6r4";
+          rev = "a03debdf4aeb3232ae54a9712790f6727a592538";
+          sha256 = "027nam0jq6ldwgix200w78zj1hp2khqskhcvxavkhychpl8v501y";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/bd98f85461ef7134502d4f2aa8ce1bc764f3bda3/recipes/smartparens";
@@ -68970,12 +69277,12 @@
     suggest = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, lib, loop, melpaBuild, s }:
     melpaBuild {
         pname = "suggest";
-        version = "20180115.1439";
+        version = "20180206.1327";
         src = fetchFromGitHub {
           owner = "Wilfred";
           repo = "suggest.el";
-          rev = "bcb2629e548de11d5eeca4a4f346b8a251b533c7";
-          sha256 = "0rq93sljqa8r1vc47cwsrf2qnrl3rs1dixg6zkr9fr0clg5vz0jq";
+          rev = "27c5c7722248baff572a0f3a672662618be4eebc";
+          sha256 = "0pwd0cic3kj977171mpl0kkzas5l6cr806w1mhymcncgbybnr1pk";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/b9fd27e812549587dc2ec26bb58974177ff263ff/recipes/suggest";
@@ -69327,12 +69634,12 @@
     swiper = callPackage ({ emacs, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild }:
     melpaBuild {
         pname = "swiper";
-        version = "20180124.1142";
+        version = "20180211.1018";
         src = fetchFromGitHub {
           owner = "abo-abo";
           repo = "swiper";
-          rev = "ffc34c666c2b214d01e3f722249f45d1672566bb";
-          sha256 = "0gzf8l0clh2p86m6xcygykskhigr43cpwfvj1sl06mcq600fxavn";
+          rev = "cc5197d5de78ba981df54815c8615d795e0ffdc5";
+          sha256 = "0c8866mb2ca419b6zh153vp298dxwldj29lbrynwr1jlpjf1dbr5";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/e64cad81615ef3ec34fab1f438b0c55134833c97/recipes/swiper";
@@ -69348,12 +69655,12 @@
     swiper-helm = callPackage ({ emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, swiper }:
     melpaBuild {
         pname = "swiper-helm";
-        version = "20151116.330";
+        version = "20180131.944";
         src = fetchFromGitHub {
           owner = "abo-abo";
           repo = "swiper-helm";
-          rev = "57012ab626486fcb3dfba0ee6720b0625e489b8c";
-          sha256 = "1fr9vs0574g93mq88d25nmj93hrx4d4s2d0im6wk156k2yb8ha2b";
+          rev = "93fb6db87bc6a5967898b5fd3286954cc72a0008";
+          sha256 = "05n4h20lfyg1kis5rig72ajbz680ml5fmsy6l1w4g9jx2xybpll2";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/674c709490e13267e09417e08953ff76bfbaddb7/recipes/swiper-helm";
@@ -69453,12 +69760,12 @@
     sx = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, json ? null, let-alist, lib, markdown-mode, melpaBuild }:
     melpaBuild {
         pname = "sx";
-        version = "20180128.1705";
+        version = "20180209.1414";
         src = fetchFromGitHub {
           owner = "vermiculus";
           repo = "sx.el";
-          rev = "0bc0adf1b5c93795ca814f3f123405d2782088f8";
-          sha256 = "0r54y80x44ydpbhsx4rgxwcf37x9w099wis0yy8cbb95asl7765j";
+          rev = "95100fa3c933f6b00519baa3c7073b882a1b4603";
+          sha256 = "010mlsry5s8xdah928zxy55xr51k91sqrbxv7fprir21y7nv044j";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/f16958a09820233fbe2abe403561fd9a012d0046/recipes/sx";
@@ -69642,12 +69949,12 @@
     syntactic-close = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "syntactic-close";
-        version = "20180109.316";
+        version = "20180211.538";
         src = fetchFromGitHub {
           owner = "emacs-berlin";
           repo = "syntactic-close";
-          rev = "0118d3a041448dbf98c1ab8cc25ed75d7649ca17";
-          sha256 = "0s1hamnrnh64v8sl816vd259y6j7r8rjy8avxwlfp65ah4xlcdcr";
+          rev = "5ba592366b0b29b724b1cbda952cc8e25ef8b239";
+          sha256 = "0b4lhvd3dsg95hpdnjmyhxrcaqkmigg7k5n98f9fb9b8k6gfdsan";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/f2c15c0c8ee37a1de042a974c6daddbfa7f33f1d/recipes/syntactic-close";
@@ -69704,12 +70011,12 @@
     system-packages = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "system-packages";
-        version = "20180121.1007";
+        version = "20180131.1624";
         src = fetchFromGitHub {
           owner = "jabranham";
           repo = "system-packages";
-          rev = "466785ba8425308d00de1211bc79aebc0dd1ce75";
-          sha256 = "16szrakal0l3p2aj133a16830zl7rcca357bbz0gj3n3vj9hiys9";
+          rev = "ba902ce6602649aefda675e3c3cfcf20ac7995f2";
+          sha256 = "017gif03773wlb0jfy45lsmq5vxqhghslxck9g6rgap22xn3xbcs";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/8c423d8c1ff251bd34df20bdb8b425c2f55ae1b1/recipes/system-packages";
@@ -70064,8 +70371,8 @@
         src = fetchFromGitHub {
           owner = "phillord";
           repo = "tawny-owl";
-          rev = "ba321af1103d463ee46cef68416cab635884cc7c";
-          sha256 = "17038h6yxq8h0nb35vrjgxh0iwhqibbxympxlnxa1z2k46imzyhg";
+          rev = "b6838add6e418eccb557f8261c49ea5d65a7068d";
+          sha256 = "157gxkdryzh1zzcinljmzpbmb1vhrmkz37zfkbyl3ls8ibnw3lxb";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/ea9a114ff739f7d6f5d4c3167f5635ddf79bf60c/recipes/tawny-mode";
@@ -70480,12 +70787,12 @@
     terminal-here = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "terminal-here";
-        version = "20171022.552";
+        version = "20180208.944";
         src = fetchFromGitHub {
           owner = "davidshepherd7";
           repo = "terminal-here";
-          rev = "b3659e13d3d41503b4fc59dd2c7ea622631fc3ec";
-          sha256 = "1z3ngwgv8ybwq42lkpavk51a25zdkl6v9xdfi41njpxdpbfcmx8z";
+          rev = "e769d3741d1023af4f965609f75e3567c89de6f0";
+          sha256 = "0g0y8haw1476jr0pd1s9jckf78da11aigdkd9akzlawsvvx8z864";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/f8df6f7e23476eb52e7fdfbf9de277d3b44db978/recipes/terminal-here";
@@ -70862,8 +71169,8 @@
         src = fetchFromGitHub {
           owner = "myTerminal";
           repo = "theme-looper";
-          rev = "d520d29a8bf4061b2f5f750122a0f87f4dc3da6e";
-          sha256 = "1zfmmn2wiw2vb0c262nnn5pkfjm7md91rx18l65glcq4y7200ra0";
+          rev = "875c2cfc84b3c143d3b14a7aba38905e35559157";
+          sha256 = "145gbjizkkmdil1mmhsppmda22xg6blz81zqfsrd5aznwpiyw36q";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/theme-looper";
@@ -70988,8 +71295,8 @@
         src = fetchFromGitHub {
           owner = "apache";
           repo = "thrift";
-          rev = "3d556248a8b97310da49939195330691dfe9d9ad";
-          sha256 = "0nz71cgi4ixs33x6f6lfdamsbn59sgjqn8x4z0ibssgb7ahahj2f";
+          rev = "35d62edd6e9ff84b0fdd472e132a739b663a41c2";
+          sha256 = "012sgyx7zqll08zfl2v1jkik5p4wxzvp40njm6h5kps5igx2wnal";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/857ab7e3a5c290265d88ebacb9685b3faee586e5/recipes/thrift";
@@ -71068,12 +71375,12 @@
     tide = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild, s, typescript-mode }:
     melpaBuild {
         pname = "tide";
-        version = "20180125.418";
+        version = "20180208.246";
         src = fetchFromGitHub {
           owner = "ananthakumaran";
           repo = "tide";
-          rev = "6a62e0709cf1f78c0596973217a167d233ad4a74";
-          sha256 = "16f418sk0b7z2kq047pz1lxwx1yanbfcjyp7jlhxajklwmmsv43i";
+          rev = "ca8a1c49eff59a07fefadb40d5bd60b4eee73605";
+          sha256 = "0avxxgmgl1q23yj087y9vfi0r6w8ckm0l3pj9syd9yj1l05wbrwz";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/a21e063011ebbb03ac70bdcf0a379f9e383bdfab/recipes/tide";
@@ -71881,12 +72188,12 @@
     transmission = callPackage ({ emacs, fetchFromGitHub, fetchurl, let-alist, lib, melpaBuild }:
     melpaBuild {
         pname = "transmission";
-        version = "20180116.854";
+        version = "20180201.1506";
         src = fetchFromGitHub {
           owner = "holomorph";
           repo = "transmission";
-          rev = "cbdf6fe7a25f5ff7aee786fdda83ce0f2de2bd2c";
-          sha256 = "1ddqk466fjxmy41w9dm7cxx89f18di9410aqmfzhivsi0ryl8q3i";
+          rev = "03a36853f141387654b7cb9217c7417db096a083";
+          sha256 = "0kvg2gawsgy440x1fsl2c4pkxwp3zirq9rzixanklk0ryijhd3ry";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9ed7e414687c0bd82b140a1bd8044084d094d18f/recipes/transmission";
@@ -71983,22 +72290,22 @@
           license = lib.licenses.free;
         };
       }) {};
-    treemacs = callPackage ({ ace-window, cl-lib ? null, dash, emacs, f, fetchFromGitHub, fetchurl, hydra, lib, melpaBuild, pfuture, s }:
+    treemacs = callPackage ({ ace-window, cl-lib ? null, dash, emacs, f, fetchFromGitHub, fetchurl, ht, hydra, lib, melpaBuild, pfuture, s }:
     melpaBuild {
         pname = "treemacs";
-        version = "20180128.1312";
+        version = "20180207.2220";
         src = fetchFromGitHub {
           owner = "Alexander-Miller";
           repo = "treemacs";
-          rev = "16640850f4b9810e88236e81b7b64ca56a95e05c";
-          sha256 = "0dxcpdw3jvfnij7pyy4d13wspfw7kxknxk8512q22ck51n0835ss";
+          rev = "9ad516c8bd2a8db58ed9934420f6626921ab7b47";
+          sha256 = "09qbz4ss5k6wd7r00y280kkhsp4dx57ghrzdld53fkx2gmhq6zr1";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/7a680ee3b4a0ab286ac04d84b3fba7606b40c65b/recipes/treemacs";
           sha256 = "0zbnw48wrbq9g7vlwxapxpq9xz8cqyr63814w0pqnh6j40ia7r2a";
           name = "treemacs";
         };
-        packageRequires = [ ace-window cl-lib dash emacs f hydra pfuture s ];
+        packageRequires = [ ace-window cl-lib dash emacs f ht hydra pfuture s ];
         meta = {
           homepage = "https://melpa.org/#/treemacs";
           license = lib.licenses.free;
@@ -72007,12 +72314,12 @@
     treemacs-evil = callPackage ({ evil, fetchFromGitHub, fetchurl, lib, melpaBuild, treemacs }:
     melpaBuild {
         pname = "treemacs-evil";
-        version = "20180110.905";
+        version = "20180203.416";
         src = fetchFromGitHub {
           owner = "Alexander-Miller";
           repo = "treemacs";
-          rev = "16640850f4b9810e88236e81b7b64ca56a95e05c";
-          sha256 = "0dxcpdw3jvfnij7pyy4d13wspfw7kxknxk8512q22ck51n0835ss";
+          rev = "9ad516c8bd2a8db58ed9934420f6626921ab7b47";
+          sha256 = "09qbz4ss5k6wd7r00y280kkhsp4dx57ghrzdld53fkx2gmhq6zr1";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/7a680ee3b4a0ab286ac04d84b3fba7606b40c65b/recipes/treemacs-evil";
@@ -72028,12 +72335,12 @@
     treemacs-projectile = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, projectile, treemacs }:
     melpaBuild {
         pname = "treemacs-projectile";
-        version = "20171204.845";
+        version = "20180203.416";
         src = fetchFromGitHub {
           owner = "Alexander-Miller";
           repo = "treemacs";
-          rev = "16640850f4b9810e88236e81b7b64ca56a95e05c";
-          sha256 = "0dxcpdw3jvfnij7pyy4d13wspfw7kxknxk8512q22ck51n0835ss";
+          rev = "9ad516c8bd2a8db58ed9934420f6626921ab7b47";
+          sha256 = "09qbz4ss5k6wd7r00y280kkhsp4dx57ghrzdld53fkx2gmhq6zr1";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/7a680ee3b4a0ab286ac04d84b3fba7606b40c65b/recipes/treemacs-projectile";
@@ -72236,12 +72543,12 @@
     tuareg = callPackage ({ caml, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "tuareg";
-        version = "20171204.1417";
+        version = "20180207.836";
         src = fetchFromGitHub {
           owner = "ocaml";
           repo = "tuareg";
-          rev = "a6d1589e256d861bfb51c59756b0aa25e88dfb89";
-          sha256 = "0i9x6cvx61djavn35v8j4ildli0s9ixalxbwc4yb7sdax7379xhb";
+          rev = "45f73c8fb4c6467fc54a5a905deea322ffae180c";
+          sha256 = "1xhbnz0lv771bbpb6vizacdn2j47y2spdf42m72iv5iix6cgpnmq";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/01fb6435a1dfeebdf4e7fa3f4f5928bc75526809/recipes/tuareg";
@@ -73317,12 +73624,12 @@
     use-package = callPackage ({ bind-key, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "use-package";
-        version = "20180127.1413";
+        version = "20180206.1414";
         src = fetchFromGitHub {
           owner = "jwiegley";
           repo = "use-package";
-          rev = "8ecb0f1c56eaeb04213b476866eaa6939f735a61";
-          sha256 = "1w4v3zsz2ypmjdysql0v0jk326bdf1jc7w0l1kn0flzsl2l70yn8";
+          rev = "6af4b6caf67f5fbd63429d27fa54a92933df966a";
+          sha256 = "13qp22m3sd1x84776d9v3h2071zj1xlmkdqi6s6wks6gk3ybyia1";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/51a19a251c879a566d4ae451d94fcb35e38a478b/recipes/use-package";
@@ -73342,8 +73649,8 @@
         src = fetchFromGitHub {
           owner = "jwiegley";
           repo = "use-package";
-          rev = "8ecb0f1c56eaeb04213b476866eaa6939f735a61";
-          sha256 = "1w4v3zsz2ypmjdysql0v0jk326bdf1jc7w0l1kn0flzsl2l70yn8";
+          rev = "6af4b6caf67f5fbd63429d27fa54a92933df966a";
+          sha256 = "13qp22m3sd1x84776d9v3h2071zj1xlmkdqi6s6wks6gk3ybyia1";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/6240afa625290187785e4b7535ee7b0d7aad8969/recipes/use-package-chords";
@@ -73359,12 +73666,12 @@
     use-package-el-get = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, use-package }:
     melpaBuild {
         pname = "use-package-el-get";
-        version = "20180122.142";
+        version = "20180130.2105";
         src = fetchFromGitHub {
           owner = "edvorg";
           repo = "use-package-el-get";
-          rev = "34f9feec6db0d9cf0a95544b960cf5d5c6a33621";
-          sha256 = "1sjvzhnl2nk2wq440mqbai01r2zxyflsl96vxbbz9g9z8ak47k8b";
+          rev = "f33c448ed43ecb003b60ff601ee7ef9b08cff947";
+          sha256 = "1wzn3h8k7aydj3hxxws64b0v4cr3b77cf7z128xh3v6xz2w62m4z";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/ee4a96cf467bcab171a0adfd4ef754abec1a9971/recipes/use-package-el-get";
@@ -73384,8 +73691,8 @@
         src = fetchFromGitHub {
           owner = "jwiegley";
           repo = "use-package";
-          rev = "8ecb0f1c56eaeb04213b476866eaa6939f735a61";
-          sha256 = "1w4v3zsz2ypmjdysql0v0jk326bdf1jc7w0l1kn0flzsl2l70yn8";
+          rev = "6af4b6caf67f5fbd63429d27fa54a92933df966a";
+          sha256 = "13qp22m3sd1x84776d9v3h2071zj1xlmkdqi6s6wks6gk3ybyia1";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/6240afa625290187785e4b7535ee7b0d7aad8969/recipes/use-package-ensure-system-package";
@@ -73398,6 +73705,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    usql = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "usql";
+        version = "20180204.1407";
+        src = fetchFromGitHub {
+          owner = "nickbarnwell";
+          repo = "usql.el";
+          rev = "b6bd210ba3feec946576ab1f130d9f91ad2e2c44";
+          sha256 = "1y1da6ipig7r5wcnb1v4pj0j56dsykvgy2pw0h4jxxibcr50pa42";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/c8f6b968312a09d062fcc8f942d29c93df2a5a3c/recipes/usql";
+          sha256 = "10ks164kcly5gkb2qmn700a51kph2sry4a64jwn60p5xl7w7af84";
+          name = "usql";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/usql";
+          license = lib.licenses.free;
+        };
+      }) {};
     utop = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "utop";
@@ -73884,12 +74212,12 @@
     vertica-snippets = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, yasnippet }:
     melpaBuild {
         pname = "vertica-snippets";
-        version = "20180122.44";
+        version = "20180208.154";
         src = fetchFromGitHub {
           owner = "baron42bba";
           repo = "vertica-snippets";
-          rev = "61b33bb012801e6c883a72c829cddbbc4241590b";
-          sha256 = "0n6gsblj6b3jnmjq9mgr0hx5jj5p4wg3b4mpvhilp3crw02zllw2";
+          rev = "5959d86c77d4b8f67383f65f7f6ca3e0db2a9529";
+          sha256 = "0hmvd2kly7k51qfhkg6rzcq0a5ksskr1r0x07i0imz0idm77g29z";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/d3c8cb5c0fdbb6820a08091d8936dd53a3c43c56/recipes/vertica-snippets";
@@ -74136,12 +74464,12 @@
     virtualenvwrapper = callPackage ({ dash, fetchFromGitHub, fetchurl, lib, melpaBuild, s }:
     melpaBuild {
         pname = "virtualenvwrapper";
-        version = "20171119.1403";
+        version = "20180211.1744";
         src = fetchFromGitHub {
           owner = "porterjamesj";
           repo = "virtualenvwrapper.el";
-          rev = "fa49954d44cb47a46d7a2bd8566ea21dd0823dea";
-          sha256 = "1d69bpx7q3x4z9d81iwapfna0p94krkfvlqr1fy3lq0g9537ahn2";
+          rev = "bf13158dde071bdf4901709ed101aba6b8a25f7f";
+          sha256 = "003nj9i6kfjyw1bdz1y3dssp3ff7irhsfq21r430xvdfnzrby4ky";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/acc9b816796b9f142c53f90593952b43c962d2d8/recipes/virtualenvwrapper";
@@ -74203,8 +74531,8 @@
         src = fetchFromGitHub {
           owner = "joostkremers";
           repo = "visual-fill-column";
-          rev = "57c2a72d46900117ea92e0a01b97e19481800503";
-          sha256 = "086zfx4lh168rg50ndg8qzdh8vzc6sgfii7qzcn4mg4wa74hnp9y";
+          rev = "d97017e9bcca79e6a0f3ef63414a954319feb879";
+          sha256 = "11w3krp5z6yxchqlz45kqiqf0y9drplmanixw3q4r5cwaspx94qh";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/c7628c805840c4687686d0b9dc5007342864721e/recipes/visual-fill-column";
@@ -74283,12 +74611,12 @@
     vlf = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "vlf";
-        version = "20170830.1148";
+        version = "20180201.1454";
         src = fetchFromGitHub {
           owner = "m00natic";
           repo = "vlfi";
-          rev = "a01e9ed416cd81ccddebebbf05d4ca80060b07dc";
-          sha256 = "0ziz08ylhkqwj2rp6h1z1yi309f6791b9r91nvr255l2331481pm";
+          rev = "31b292dc85a374fb343789e217015683bfbdf5f1";
+          sha256 = "18ll47if9ajv0jj2aps8592bj7xqhxy74sbsqn07x9ywinxxi9mn";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9116b11eb513dd9e1dc9542d274dd60f183b24c4/recipes/vlf";
@@ -74597,12 +74925,12 @@
     wanderlust = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, semi }:
     melpaBuild {
         pname = "wanderlust";
-        version = "20171209.227";
+        version = "20180210.2213";
         src = fetchFromGitHub {
           owner = "wanderlust";
           repo = "wanderlust";
-          rev = "2a058670d9f65e7c9e5b203b31d5946bcb2bf144";
-          sha256 = "1kpw9al401x7mwzan273dz38699hirz5rdlpwihmrvccpa279r6p";
+          rev = "7c70e6308242a8e9f175fca02da9b55a1805508c";
+          sha256 = "0ipwchasw6ijykyl6ikxkghzigbxg8g10rdxqcy0250ra57afc2p";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/426172b72026d1adeb1bf3fcc6b0407875047333/recipes/wanderlust";
@@ -74828,12 +75156,12 @@
     web-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "web-mode";
-        version = "20180120.1009";
+        version = "20180211.945";
         src = fetchFromGitHub {
           owner = "fxbois";
           repo = "web-mode";
-          rev = "716893f9fd4dc9612f00a5dfe4b2b8e8fdb19762";
-          sha256 = "0jl36d40454h3qljc8hgqxjcdzvi1xfk7zhld7y0d4r4n77r08r0";
+          rev = "d667edc2e35f5e4fe8cc4465e6359ee001a1516a";
+          sha256 = "072x1kgzm9pp3bg1sq7zb1v95m19ksnnjdvf26ablwcldsgapncd";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/6f0565555eaa356141422c5175d6cca4e9eb5c00/recipes/web-mode";
@@ -75206,12 +75534,12 @@
     which-key = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "which-key";
-        version = "20180108.1930";
+        version = "20180131.606";
         src = fetchFromGitHub {
           owner = "justbur";
           repo = "emacs-which-key";
-          rev = "1219622b756f149efe4b44c625f2140c5229f936";
-          sha256 = "14wfaqlixiqg79q6vb89jjvgvxwfgcdkgxyqh2bqsjwam9xksmlp";
+          rev = "fce520f8af727bd33861f8d0f7655c01ea84ad85";
+          sha256 = "1sgaln0d6rslvln4bvznkp401sizngwp6ypscp4gn95ygq2aam39";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/315865a3df97c0694f648633d44b8b34df1ac76d/recipes/which-key";
@@ -76423,12 +76751,12 @@
     xah-fly-keys = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "xah-fly-keys";
-        version = "20180107.1546";
+        version = "20180211.1348";
         src = fetchFromGitHub {
           owner = "xahlee";
           repo = "xah-fly-keys";
-          rev = "c7ebabe6ccff0bce35cf7feb1cef34f4c69aee50";
-          sha256 = "1r4ld1b8dd39bggjhzj6rd3wan3yhw5sm3zi623yad7w48c4xpna";
+          rev = "b88e84bafc93b109c53cee2be88b8fd6517187be";
+          sha256 = "1394v3mgmx7hwxi3slszhlc82hds6c4p0pfglyd2bf33c56shk6h";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/05eed39bae37cc8359d2cc678052cbbcc946e379/recipes/xah-fly-keys";
@@ -76885,12 +77213,12 @@
     xterm-color = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "xterm-color";
-        version = "20170102.1525";
+        version = "20180202.1518";
         src = fetchFromGitHub {
           owner = "atomontage";
           repo = "xterm-color";
-          rev = "5873477fd7bd6e54142ab35fbc623ea9b55200aa";
-          sha256 = "1328avc28barirwipasnhq81sn4nw6w6x6fffgqcxayv2r5bl1d8";
+          rev = "42374a98f1039e105cad9f16ce585dffc96a3f1c";
+          sha256 = "09mzzql76z3gn39qnfjspm8waps8msbkilmlk3n2zrizpbps6crj";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/b34a42f1bf5641871da8ce2b688325023262b643/recipes/xterm-color";
@@ -77137,12 +77465,12 @@
     yaml-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "yaml-mode";
-        version = "20170727.1531";
+        version = "20180204.2333";
         src = fetchFromGitHub {
           owner = "yoshiki";
           repo = "yaml-mode";
-          rev = "28c34033194130d452d5c958b5241c88d42ca02b";
-          sha256 = "1m3fr19sfkr7d94qzqkl7x1jmhpar2hnhq6mjscd3lfcqkifh6kv";
+          rev = "7f4103736178fc6e3a9a9ba3b3d0516986ab8b71";
+          sha256 = "0y153522yg5qmkdcbf7h87zcambgl9hf9bwk8dq22c0vgdc04v3i";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/cae2ac3513e371a256be0f1a7468e38e686c2487/recipes/yaml-mode";
@@ -77368,12 +77696,12 @@
     yasnippet = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "yasnippet";
-        version = "20180124.1445";
+        version = "20180211.1442";
         src = fetchFromGitHub {
           owner = "joaotavora";
           repo = "yasnippet";
-          rev = "8b421bc78d56263a2adc128337540e50a1c19c6a";
-          sha256 = "0ryzk38gdz87cr44nqn31wz74qjyrjzcnqwnjsisvzzz3ivhpdqm";
+          rev = "c9277d326e9c8b6052bbb35eb86467e43a7e9424";
+          sha256 = "0hddvg7b3ba1irydhybr011d9dfxvnqj9km4km9l3xk9fx0kkqvw";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/5d1927dc3351d3522de1baccdc4ce200ba52bd6e/recipes/yasnippet";
@@ -77432,13 +77760,13 @@
         pname = "yatex";
         version = "20180122.1744";
         src = fetchhg {
-          url = "https://www.yatex.org/hgrepos/yatex/";
+          url = "https://www.yatex.org/hgrepos/yatex";
           rev = "b1896ef49747";
           sha256 = "1a8qc1krskl5qdy4fikilrrzrwmrghs4h1yaj5lclzywpc67zi8b";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/e28710244a1bef8f56156fe1c271520896a9c694/recipes/yatex";
-          sha256 = "17np4am7yan1bh4706azf8in60c41158h3z591478j5b1w13y5a6";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/9854c39fc1889891fe460d0d5ac9224de3f6c635/recipes/yatex";
+          sha256 = "1qbqdsqf5s61hyyzx84csnby242n5sdcmcw55pa8r16j8kyzgrc0";
           name = "yatex";
         };
         packageRequires = [];
@@ -77496,8 +77824,8 @@
         src = fetchFromGitHub {
           owner = "abingham";
           repo = "emacs-ycmd";
-          rev = "7f394d02f6f3149b215adcc96043c78d5f32d612";
-          sha256 = "0q7y0cg2gw15sm0yi45gc81bsrybv8w8z58vjlq1qp0nxpcz3ipl";
+          rev = "e21c99de8fd2992031adaa758df0d495e55d682a";
+          sha256 = "1l9xsqlcqi25mdka806gz3h4y4x0dh00n6bajh3x908ayixjgf91";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/4b25378540c64d0214797348579671bf2b8cc696/recipes/ycmd";
@@ -77565,12 +77893,12 @@
     yoficator = callPackage ({ fetchFromGitLab, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "yoficator";
-        version = "20171206.1630";
+        version = "20180129.1252";
         src = fetchFromGitLab {
           owner = "link2xt";
           repo = "yoficator";
-          rev = "5ad60258097147cdd8d71147722cc4203a59a0b0";
-          sha256 = "0b2xzkw0rxbxfk6rxapy82zl61k51cis9nsnw67v7h2s2423jhcr";
+          rev = "e0dc076cb0d1999cb41585b5f36322681109fe86";
+          sha256 = "1vq07ndxrdry26dx3ci4yz1a1qdcr20yznj62y2f0wkyccrai9y9";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/5156f01564978718dd99ab3a54f19b6512de5c3c/recipes/yoficator";
@@ -77649,12 +77977,12 @@
     zeal-at-point = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "zeal-at-point";
-        version = "20170427.2042";
+        version = "20180131.1554";
         src = fetchFromGitHub {
           owner = "jinzhu";
           repo = "zeal-at-point";
-          rev = "50a1bd4240ff0db7c8f2046c3b00c5a8e14b9d2f";
-          sha256 = "1xy9nbbk0fkd9dm8n0c0gy52vi34s6vgzbnab0hrghn6whs89ig8";
+          rev = "0fc3263f44e95acd3e9d91057677621ce4d297ee";
+          sha256 = "0aq9w9pjyzdgf63hwffhph6k43vv3cxmffklrjkjj3hqv796k8yd";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/4bcb472b6b18b75acd9c68e1fc7ecce4c2a40d8f/recipes/zeal-at-point";
@@ -77756,13 +78084,13 @@
         pname = "zenity-color-picker";
         version = "20160302.354";
         src = fetchgit {
-          url = "https://bitbucket.org/Soft/zenity-color-picker.el.git";
+          url = "https://bitbucket.org/Soft/zenity-color-picker.el";
           rev = "4f4f46676a461ebc881487fb70c8c181e323db5e";
           sha256 = "14i2k52qz77dv04w39fyp9hfq983fwa3803anqragk608xgwpf4s";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/e7c8f99ac93f2b828ded420a2fbcd18356ea641e/recipes/zenity-color-picker";
-          sha256 = "1v6ks922paacdgpv5v8cpic1g66670x73ixsy2nixs5qdw241wzl";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/8b4c6b03c5ff78ce327dcf66b175e266bbc53dbf/recipes/zenity-color-picker";
+          sha256 = "0rim1mbhlb2lj302c58rs5l7bd168nxg1jpir6cbpf8rp0k35ldb";
           name = "zenity-color-picker";
         };
         packageRequires = [ emacs ];
@@ -77795,12 +78123,12 @@
     zerodark-theme = callPackage ({ all-the-icons, fetchFromGitHub, fetchurl, flycheck, lib, magit, melpaBuild }:
     melpaBuild {
         pname = "zerodark-theme";
-        version = "20180125.739";
+        version = "20180201.246";
         src = fetchFromGitHub {
           owner = "NicolasPetton";
           repo = "zerodark-theme";
-          rev = "f22ea6ed957440dccbb4a21bacc545d27830423e";
-          sha256 = "0p317q99js4aynjvkxanwlbq0hb10njhzl9s975p7pi6abfxfkkm";
+          rev = "553ba2ba9907e56bda1d2ebf142ba7cbf9bd16f1";
+          sha256 = "1d9fclil0nf06gc9734y3p6clkxpwxa8nqh9mk9kpj8k9b36lxcn";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/d00b78ead693e844e35c760fe2c39b8ed6cb0d81/recipes/zerodark-theme";
@@ -78152,11 +78480,11 @@
     zpresent = callPackage ({ dash, emacs, fetchhg, fetchurl, lib, melpaBuild, org-parser, request }:
     melpaBuild {
         pname = "zpresent";
-        version = "20171008.2152";
+        version = "20180205.2109";
         src = fetchhg {
           url = "https://bitbucket.com/zck/zpresent.el";
-          rev = "eb6f5bf71b00";
-          sha256 = "1q3xz4gwqb7ac49w0nq7zvl4n790wk6r97by1kldv54y2fj0ja9g";
+          rev = "53a247d2c21b";
+          sha256 = "1a45l3i1gg0pyka13z6hra3wyp6x564cz66gbi10sqly2jlwgxda";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3aae38ad54490fa650c832fb7d22e2c73b0fb060/recipes/zpresent";
@@ -78172,12 +78500,12 @@
     ztree = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "ztree";
-        version = "20170223.1014";
+        version = "20180210.717";
         src = fetchFromGitHub {
           owner = "fourier";
           repo = "ztree";
-          rev = "febc2d02373312ce69f56c9dbe54cabea3e0813c";
-          sha256 = "0sj30f87gvxbqwi1k7xxqc1h0w7n53630d04csqayiwvc6a2z2sz";
+          rev = "d078dafa74f4e2a001f1aeecf718c0716779d77e";
+          sha256 = "1skhvq48f6pl1i53gaa1bplbwd1ik21a12vryby3gk3w5ccw3wng";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/f151e057c05407748991f23c021e94c178b87248/recipes/ztree";
diff --git a/pkgs/applications/editors/emacs-modes/melpa-stable-generated.nix b/pkgs/applications/editors/emacs-modes/melpa-stable-generated.nix
index 507e7bfcbe3b..148099d1005d 100644
--- a/pkgs/applications/editors/emacs-modes/melpa-stable-generated.nix
+++ b/pkgs/applications/editors/emacs-modes/melpa-stable-generated.nix
@@ -548,12 +548,12 @@
     ac-php = callPackage ({ ac-php-core, auto-complete, fetchFromGitHub, fetchurl, lib, melpaBuild, yasnippet }:
     melpaBuild {
         pname = "ac-php";
-        version = "2.0.2";
+        version = "2.0.3";
         src = fetchFromGitHub {
           owner = "xcwen";
           repo = "ac-php";
-          rev = "b9f455d863d3e92fcf32eaa722447c6d62ee1297";
-          sha256 = "1mwx61yxsxzd9d6jas61rsc68vc7mrlzkxxyyzcq21qvikadigrk";
+          rev = "cf9db85af2db9150e9d9b4fecad874e16ce43f0d";
+          sha256 = "0gm15f5l91sh7syf60lnvlfnf3vivbk36gddsf3yndiwfsqh7xd0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/ac283f1b65c3ba6278e9d3236e5a19734e42b123/recipes/ac-php";
@@ -569,12 +569,12 @@
     ac-php-core = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, php-mode, popup, s, xcscope }:
     melpaBuild {
         pname = "ac-php-core";
-        version = "2.0.2";
+        version = "2.0.3";
         src = fetchFromGitHub {
           owner = "xcwen";
           repo = "ac-php";
-          rev = "b9f455d863d3e92fcf32eaa722447c6d62ee1297";
-          sha256 = "1mwx61yxsxzd9d6jas61rsc68vc7mrlzkxxyyzcq21qvikadigrk";
+          rev = "cf9db85af2db9150e9d9b4fecad874e16ce43f0d";
+          sha256 = "0gm15f5l91sh7syf60lnvlfnf3vivbk36gddsf3yndiwfsqh7xd0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/ac283f1b65c3ba6278e9d3236e5a19734e42b123/recipes/ac-php-core";
@@ -611,12 +611,12 @@
     ac-rtags = callPackage ({ auto-complete, fetchFromGitHub, fetchurl, lib, melpaBuild, rtags }:
     melpaBuild {
         pname = "ac-rtags";
-        version = "2.16";
+        version = "2.18";
         src = fetchFromGitHub {
           owner = "Andersbakken";
           repo = "rtags";
-          rev = "8ef7554852541eced514c56d5e39d6073f7a2ef9";
-          sha256 = "0hh9m0ykw3r9h4gv4a99px00py1h5hs86043mp1m0nmkjibf6w56";
+          rev = "98d668e85cf9ae84e775742752c5656dd2df2f17";
+          sha256 = "0raqjbkl1ykga4ahgl9xw49cgh3cyqcf42z36z7d6fz1fw192kg0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/ac-rtags";
@@ -905,12 +905,12 @@
     adafruit-wisdom = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "adafruit-wisdom";
-        version = "0.2.0";
+        version = "0.2.1";
         src = fetchFromGitHub {
           owner = "gonewest818";
           repo = "adafruit-wisdom.el";
-          rev = "67e1fb17964c09514e7635dba85fb14b0926e49c";
-          sha256 = "097r31l4fpj4yd2ajv6zwgwn35fwn3c83qg9yzm2rjz1rdcwxlrw";
+          rev = "2b353f9029f359eb4eb4f0364bd2fbbedf081e42";
+          sha256 = "0zyqnwmrj7yigk1z9baqxmzxnwhpxfjz9r1gl090harl69hdp67d";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/18483af52c26f719fbfde626db84a67750bf4754/recipes/adafruit-wisdom";
@@ -2557,12 +2557,12 @@
     base16-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "base16-theme";
-        version = "2.1";
+        version = "2.2";
         src = fetchFromGitHub {
           owner = "belak";
           repo = "base16-emacs";
-          rev = "f6d3d45a88d8fa2d70eaa26d8ebcef741b370dd1";
-          sha256 = "19jbvz07qc325mqdzk0q1ycvpibndw0mb7s7bpr0f0nblla0l0sv";
+          rev = "10180e88d6d9434cec367b6c91222dd2fc3bd8ae";
+          sha256 = "01w89g413s1da6rf94y1xnhw79cjy2bqb01yfjs58cy492cm0vr6";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/30862f6be74882cfb57fb031f7318d3fd15551e3/recipes/base16-theme";
@@ -2830,12 +2830,12 @@
     better-shell = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "better-shell";
-        version = "1.1";
+        version = "1.2";
         src = fetchFromGitHub {
           owner = "killdash9";
           repo = "better-shell";
-          rev = "6ae157da700a4473734dca75925f6bf60e6b3ba7";
-          sha256 = "14ym7gp57yflf86hxpsjnagxnc0z1jrdc4mbq7wcbh5z8kjkbfpd";
+          rev = "f231404b6f8efce33b48e31e5b1566108d0ba000";
+          sha256 = "1g5bljvigga856ksyvgix9hk0pp9nzic088kp0bqx0zqvcl82v0b";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/better-shell";
@@ -3775,12 +3775,12 @@
     caml = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "caml";
-        version = "4.6.1pre1";
+        version = "4.6.1pre2";
         src = fetchFromGitHub {
           owner = "ocaml";
           repo = "ocaml";
-          rev = "b50ba2e822ff3a780f9b5a323d48e40881a88fc7";
-          sha256 = "10im6z3nrkn0yh8004jwk68gjl0lz7qq3dpj24q50nhhqabw9ah5";
+          rev = "b057bd0758f63f41fd8853ee025c58368e33ed21";
+          sha256 = "1s066clvar4ws0mingh68jrj87dak52grs8mnd2ibcf1kf21w08q";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/d5a3263cdcc229b11a3e96edbf632d56f32c47aa/recipes/caml";
@@ -3838,12 +3838,12 @@
     cask = callPackage ({ cl-lib ? null, dash, epl, f, fetchFromGitHub, fetchurl, lib, melpaBuild, package-build, s, shut-up }:
     melpaBuild {
         pname = "cask";
-        version = "0.8.1";
+        version = "0.8.2";
         src = fetchFromGitHub {
           owner = "cask";
           repo = "cask";
-          rev = "58f641960bcb152b33fcd27d41111291702e2da6";
-          sha256 = "1sl094adnchjvf189c3l1njawrj5ww1sv5vvjr9hb1ng2rw20z7b";
+          rev = "afdd191b97e76c8393f656336699419a2b39ca1a";
+          sha256 = "10qiapg6kp890q8n2pamvnnpxwcgcldw20mp23pmwzh9nsvqrpbs";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/b86c666ee9b0620390a250dddd42b17cbec2409f/recipes/cask";
@@ -5486,12 +5486,12 @@
     company-php = callPackage ({ ac-php-core, cl-lib ? null, company, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "company-php";
-        version = "2.0.2";
+        version = "2.0.3";
         src = fetchFromGitHub {
           owner = "xcwen";
           repo = "ac-php";
-          rev = "b9f455d863d3e92fcf32eaa722447c6d62ee1297";
-          sha256 = "1mwx61yxsxzd9d6jas61rsc68vc7mrlzkxxyyzcq21qvikadigrk";
+          rev = "cf9db85af2db9150e9d9b4fecad874e16ce43f0d";
+          sha256 = "0gm15f5l91sh7syf60lnvlfnf3vivbk36gddsf3yndiwfsqh7xd0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/ac283f1b65c3ba6278e9d3236e5a19734e42b123/recipes/company-php";
@@ -5555,12 +5555,12 @@
     company-rtags = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, rtags }:
     melpaBuild {
         pname = "company-rtags";
-        version = "2.16";
+        version = "2.18";
         src = fetchFromGitHub {
           owner = "Andersbakken";
           repo = "rtags";
-          rev = "8ef7554852541eced514c56d5e39d6073f7a2ef9";
-          sha256 = "0hh9m0ykw3r9h4gv4a99px00py1h5hs86043mp1m0nmkjibf6w56";
+          rev = "98d668e85cf9ae84e775742752c5656dd2df2f17";
+          sha256 = "0raqjbkl1ykga4ahgl9xw49cgh3cyqcf42z36z7d6fz1fw192kg0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/company-rtags";
@@ -6854,22 +6854,22 @@
           license = lib.licenses.free;
         };
       }) {};
-    datetime = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    datetime = callPackage ({ emacs, extmap, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "datetime";
-        version = "0.3.2";
+        version = "0.4";
         src = fetchFromGitHub {
           owner = "doublep";
           repo = "datetime";
-          rev = "d99e56785d750d6c7e416955f047fe057fae54a6";
-          sha256 = "0s2pmj2wpprmdx1mppbch8i1srwhfl2pzyhsmczan75wmiblpqfj";
+          rev = "2a92d80cdc7febf620cd184cf1204a68985d0e8b";
+          sha256 = "0lzdgnmvkvap5j8hvn6pidfnc2ax317sj5r6b2nahllhh53mlr4j";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/fff9f0748b0ef76130b24e85ed109325256f956e/recipes/datetime";
-          sha256 = "0mnkckibymc5dswmzd1glggna2fspk06ld71m7aaz6j78nfrm850";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/91ef4352603cc69930ab3d63f0a90eee63f5f328/recipes/datetime";
+          sha256 = "0c000fnqg936dhjw5qij4lydzllw1x1jgnyy960zh6r61pk062xj";
           name = "datetime";
         };
-        packageRequires = [ emacs ];
+        packageRequires = [ emacs extmap ];
         meta = {
           homepage = "https://melpa.org/#/datetime";
           license = lib.licenses.free;
@@ -7935,12 +7935,12 @@
     dotenv-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "dotenv-mode";
-        version = "0.2.1";
+        version = "0.2.4";
         src = fetchFromGitHub {
           owner = "preetpalS";
           repo = "emacs-dotenv-mode";
-          rev = "8d45b98beb04f486eb13d71765589e7dccb8ffa9";
-          sha256 = "00hm097m1jn3pb6k3r2jhkhn1zaf6skcwv1v4dxlvdx8by1md49q";
+          rev = "f4c52bcd5313379b9f2460db7f7a33119dfa96ea";
+          sha256 = "1fplkhxnsgdrg10iqsmw162zny2idz4vvv35spsb9j0hsk8imclc";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9fc022c54b90933e70dcedb6a85167c2d9d7ba79/recipes/dotenv-mode";
@@ -8103,12 +8103,12 @@
     dtrt-indent = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "dtrt-indent";
-        version = "0.3";
+        version = "0.5";
         src = fetchFromGitHub {
           owner = "jscheid";
           repo = "dtrt-indent";
-          rev = "69d0c5e143453708dbf0ebec4e368bc26fff683c";
-          sha256 = "154m53hhzjawmrg2vlqjcg9npgq1igw9f0fz6gh7vscmbxl5dnjq";
+          rev = "a87d3d9cf8d4d8cb6f108004e425f9a557683b75";
+          sha256 = "0dia1xc8mng9bg987cpnhr2lciw4qbqsvzs4ayakrqfl2g3ny2qn";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/61bcbcfa6c0f38a1d87f5b6913b8be6c50ef2994/recipes/dtrt-indent";
@@ -8354,12 +8354,12 @@
     eacl = callPackage ({ emacs, fetchFromGitHub, fetchurl, ivy, lib, melpaBuild }:
     melpaBuild {
         pname = "eacl";
-        version = "1.0.3";
+        version = "1.1.1";
         src = fetchFromGitHub {
           owner = "redguardtoo";
           repo = "eacl";
-          rev = "ef58d13fbff4b5c49f934cfb9e3fd6ee219ef4b2";
-          sha256 = "0xxxzdr6iddxwx8z4lfay4n9r1ry8571lj2gadz5ycff6f6bxmhb";
+          rev = "ec601f3a8da331dd0a9e7a93d40ae3925bd06700";
+          sha256 = "1kgayh2q97rxzds5ba1zc9ah08kbah9lqbwhmb7pxxgvgx9yfagg";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/8223bec7eed97f0bad300af9caa4c8207322d39a/recipes/eacl";
@@ -9160,12 +9160,12 @@
     elbank = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, seq }:
     melpaBuild {
         pname = "elbank";
-        version = "1.0";
+        version = "1.1";
         src = fetchFromGitHub {
           owner = "NicolasPetton";
           repo = "Elbank";
-          rev = "e4b532373a32889b8ab3389bd3e726dff5dd0bcf";
-          sha256 = "0kqiwa5gr8q0rhr598v9p7dx88i3359j49j04crqwnc5y107s1xk";
+          rev = "245cbc218e94793909ecede2e0d360c7d86f3122";
+          sha256 = "1qcxh8v5dj2wcxxs3qcdny00p906nj33wsxyswwa4jbhh2vfxz12";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/05d252ee84adae2adc88fd325540f76b6cdaf010/recipes/elbank";
@@ -9178,27 +9178,6 @@
           license = lib.licenses.free;
         };
       }) {};
-    elcord = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
-    melpaBuild {
-        pname = "elcord";
-        version = "1.0.0";
-        src = fetchFromGitHub {
-          owner = "Zulu-Inuoe";
-          repo = "elcord";
-          rev = "91c665fd832ef3b79c3eb810b7a6b08979a352cd";
-          sha256 = "04nxyj94rmi22wfasi4lavn3lzkcpxpr5ksfqc8dfq9bllz4c9pa";
-        };
-        recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/36b64d0fead049df5ebd6606943a8f769324539e/recipes/elcord";
-          sha256 = "044mwil9alh2v7bjj8yvx8azym2b7a5xb0c7y0r0k2vj72wiirjb";
-          name = "elcord";
-        };
-        packageRequires = [ emacs ];
-        meta = {
-          homepage = "https://melpa.org/#/elcord";
-          license = lib.licenses.free;
-        };
-      }) {};
     eldoc-eval = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "eldoc-eval";
@@ -9286,12 +9265,12 @@
     elfeed-protocol = callPackage ({ cl-lib ? null, elfeed, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "elfeed-protocol";
-        version = "0.5.1";
+        version = "0.5.2";
         src = fetchFromGitHub {
           owner = "fasheng";
           repo = "elfeed-protocol";
-          rev = "97049eb980ce1cc2b871e4c7819133f1e4936a83";
-          sha256 = "1d2i3jg5a2wd7mb4xfdy3wbx12yigqq4ykj3zbcamvx59siip591";
+          rev = "e809a0f1c5b9713ec8d1932fa6412c57bc10150b";
+          sha256 = "0ly7g9a85r5vm8fr45km43vdl9jbzdqyiy9a7d95wx63p6aip7vs";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3f1eef8add7cd2cfefe6fad6d8e69d65696e9677/recipes/elfeed-protocol";
@@ -9923,12 +9902,12 @@
     emms-player-mpv = callPackage ({ emms, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "emms-player-mpv";
-        version = "0.0.12";
+        version = "0.0.13";
         src = fetchFromGitHub {
           owner = "dochang";
           repo = "emms-player-mpv";
-          rev = "8c72282c98f9b10601e9a6901277040cda4b33aa";
-          sha256 = "1h37kqhsi1x5xgxfp1i72vfdx5c2klblzmphf6mih3fvw3pcyxi6";
+          rev = "6d526fe618c3cebf7fbc5f0d3f0a225de16a76c7";
+          sha256 = "0jq67lngpz7iqwqfsl95r5p26cnnq7ldcj534nm86hwm6jfij564";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9679cb8d4b3b9dce1e0bff16647ea3f3e02c4189/recipes/emms-player-mpv";
@@ -10256,12 +10235,12 @@
     epl = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "epl";
-        version = "0.8";
+        version = "0.9";
         src = fetchFromGitHub {
           owner = "cask";
           repo = "epl";
-          rev = "a76ec344a7fee3ca7e7dfb98b86ebc3b8c1a3837";
-          sha256 = "0sjxd5y5hxhrbgfkpwx6m724r3841b53hgc61a0g5zwispw5pmrr";
+          rev = "fd906d3f92d58ecf24169055744409886ceb06ce";
+          sha256 = "0d3z5z90ln8ipk1yds1n1p8fj9yyh2kpspqjs7agl38indra3nb4";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9c6cf24e86d8865bd2e4b405466118de1894851f/recipes/epl";
@@ -12035,6 +12014,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    extmap = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "extmap";
+        version = "1.0";
+        src = fetchFromGitHub {
+          owner = "doublep";
+          repo = "extmap";
+          rev = "3860b69fb19c962425d4e271ee0a24547b67d323";
+          sha256 = "1vjwinb7m9l2bw324v4m1g4mc9yqjs84bfjci93m0a1ih8n4zdbr";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/91ef4352603cc69930ab3d63f0a90eee63f5f328/recipes/extmap";
+          sha256 = "0c12gfd3480y4fc22ik02n7h85k6s70i5jv5i872h0yi68cgd01j";
+          name = "extmap";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/extmap";
+          license = lib.licenses.free;
+        };
+      }) {};
     exwm-x = callPackage ({ bind-key, cl-lib ? null, exwm, fetchFromGitHub, fetchurl, lib, melpaBuild, swiper, switch-window }:
     melpaBuild {
         pname = "exwm-x";
@@ -12119,6 +12119,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    f3 = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild }:
+    melpaBuild {
+        pname = "f3";
+        version = "0.1";
+        src = fetchFromGitHub {
+          owner = "cosmicexplorer";
+          repo = "f3";
+          rev = "19120dda2d760d3dd6c6aa620121d1de0a40932d";
+          sha256 = "1qg48zbjdjqimw4516ymrsilz41zkib9321q0caf9474s9xyp2bi";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/5b40de62a82d6895a37ff795d56f7d0f783461e6/recipes/f3";
+          sha256 = "099wibgp9k6sgglaqigic5ay6qg7aqijnis5crwjl7b81ddqp610";
+          name = "f3";
+        };
+        packageRequires = [ cl-lib emacs helm ];
+        meta = {
+          homepage = "https://melpa.org/#/f3";
+          license = lib.licenses.free;
+        };
+      }) {};
     fabric = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "fabric";
@@ -12248,16 +12269,16 @@
     faust-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "faust-mode";
-        version = "0.4";
+        version = "0.6";
         src = fetchFromGitHub {
-          owner = "magnetophon";
+          owner = "rukano";
           repo = "emacs-faust-mode";
-          rev = "85f67bc4daabe6fd8dc6f5195c470716b543faa1";
-          sha256 = "0rmq6ca75x47hk2bpsk1j2ja62kpplgyanpiqq4hk6q259rd4lyv";
+          rev = "7c31b22bdbfd2f8c16ec117d2975d56dd61ac15c";
+          sha256 = "0a3p69ay88da13cz2cqx00r3qs2swnn7vkcvchcqyrdybfjs7y4z";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/31f4177ce35313e0f40e9ef0e5a1043ecd181573/recipes/faust-mode";
-          sha256 = "1lfn4q1wcc3vzazv2yzcnpvnmq6bqcczq8lpkz7w8yj8i5kpjvsc";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/b362e7daeabd07c726ad9770d7d4941dfffd5b19/recipes/faust-mode";
+          sha256 = "0l8cbf5i6lv6i5vyqp6ngfmrm2y6z2070b8m10w4376kbbnr266z";
           name = "faust-mode";
         };
         packageRequires = [];
@@ -12276,8 +12297,8 @@
           sha256 = "16p7qmljjki4svci3mxzydmvpxaprbnfq6794b3adyyixkmgr6k7";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/d7a6fc9f99241ff8e3a9c1fb12418d4d69d9e203/recipes/faustine";
-          sha256 = "1hyvkd4y28smdp30bkky6bwmqwlxjrq136wp7112371w963iwjsb";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/8b4c6b03c5ff78ce327dcf66b175e266bbc53dbf/recipes/faustine";
+          sha256 = "1blmz993xrwkyr7snj7rm07s07imgpdlfqi6wxkm4ns6iwa2q60s";
           name = "faustine";
         };
         packageRequires = [ emacs faust-mode ];
@@ -12923,22 +12944,22 @@
           license = lib.licenses.free;
         };
       }) {};
-    flycheck-dmd-dub = callPackage ({ fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild }:
+    flycheck-dmd-dub = callPackage ({ f, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild }:
     melpaBuild {
         pname = "flycheck-dmd-dub";
-        version = "0.9";
+        version = "0.12";
         src = fetchFromGitHub {
           owner = "atilaneves";
           repo = "flycheck-dmd-dub";
-          rev = "e8744adaba010415055ac15c702f780dd6e13e14";
-          sha256 = "1ap5hgvaccmf2xkfvyp7rqcfjwmiy6mhr6ccgahxm2z0vm51kpyh";
+          rev = "41a839e18eb7159175c59a2f8b2f5f283191e33f";
+          sha256 = "0a78np6nb9ciz440n9ks6kybwggkq99knzv7swbmvngvhg96khbx";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/a812594901c1099283bdf51fbea1aa077cfc588d/recipes/flycheck-dmd-dub";
           sha256 = "0pg3sf7h6xqv65yqclhlb7fx1mp2w0m3qk4vji6m438kxy6fhzqm";
           name = "flycheck-dmd-dub";
         };
-        packageRequires = [ flycheck ];
+        packageRequires = [ f flycheck ];
         meta = {
           homepage = "https://melpa.org/#/flycheck-dmd-dub";
           license = lib.licenses.free;
@@ -13346,12 +13367,12 @@
     flycheck-rtags = callPackage ({ emacs, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild, rtags }:
     melpaBuild {
         pname = "flycheck-rtags";
-        version = "2.16";
+        version = "2.18";
         src = fetchFromGitHub {
           owner = "Andersbakken";
           repo = "rtags";
-          rev = "8ef7554852541eced514c56d5e39d6073f7a2ef9";
-          sha256 = "0hh9m0ykw3r9h4gv4a99px00py1h5hs86043mp1m0nmkjibf6w56";
+          rev = "98d668e85cf9ae84e775742752c5656dd2df2f17";
+          sha256 = "0raqjbkl1ykga4ahgl9xw49cgh3cyqcf42z36z7d6fz1fw192kg0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/flycheck-rtags";
@@ -14228,12 +14249,12 @@
     fountain-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "fountain-mode";
-        version = "2.4.1";
+        version = "2.4.2";
         src = fetchFromGitHub {
           owner = "rnkn";
           repo = "fountain-mode";
-          rev = "f1dc9dff6779c0ce6ab0a1c0ae349df1194a314f";
-          sha256 = "0j1s6qws773aq3si7pnc1xmlrh9x3v3sfdni6pnlsirv2sc7c4g9";
+          rev = "e2878da13e7b87a824ebd6c842e9f552369b220c";
+          sha256 = "091c8scwdxfrg710d1rkqad6l2y8hiw8f5jg4ayvrjm7d0s29hsa";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/913386ac8d5049d37154da3ab32bde408a226511/recipes/fountain-mode";
@@ -14446,12 +14467,12 @@
     futhark-mode = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "futhark-mode";
-        version = "0.2.0";
+        version = "0.3.0";
         src = fetchFromGitHub {
           owner = "HIPERFIT";
           repo = "futhark";
-          rev = "e574976f5d8df1089672549a913a86c4039ab2cb";
-          sha256 = "0p32sxswyjj22pg25i509d9a4j8k7c6xkbv55pd8jvjfxc2hdy3p";
+          rev = "81b858a79b29622a1db732f97225cad705c4acf5";
+          sha256 = "04zxal7j58whcy384sscwc7npcqdjlq01jjjn0i35pf2v7r045xy";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/0607f01aad7e77d53595ad8db95d32acfd29b148/recipes/futhark-mode";
@@ -14509,12 +14530,12 @@
     fwb-cmds = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "fwb-cmds";
-        version = "1.0.0";
+        version = "1.1.0";
         src = fetchFromGitHub {
           owner = "tarsius";
           repo = "fwb-cmds";
-          rev = "57973f99cf4a185b5cccbf941478fad25e8428c3";
-          sha256 = "1c7h043lz10mw1hdsx9viksy6q79jipz2mm18y1inlbqhmg33n2b";
+          rev = "7d4abf8aa13b2235e4e2f0bb9049ebd6b491f710";
+          sha256 = "10xjs8gm9l3riffxip1ffg8xhcf8srffh01yn6ifyln5f70b063d";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/fe40cdeb5e19628937820181479897acdad40200/recipes/fwb-cmds";
@@ -14947,6 +14968,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    git-attr = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "git-attr";
+        version = "0.0.3";
+        src = fetchFromGitHub {
+          owner = "arnested";
+          repo = "emacs-git-attr";
+          rev = "c03078637a00ea301cbcc7ae301ae928b10af889";
+          sha256 = "05wzy8g0yjkks0zmcvwn9dmr6kxk1bz91xic3c08b0j1z5lbsdv7";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/3417e4bc586df60b5e6239b1f7683b87953f5b7c/recipes/git-attr";
+          sha256 = "084l3zdcgy1ka2wq1fz9d6ryhg38gxvr52njlv43gwibzvbqniyi";
+          name = "git-attr";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/git-attr";
+          license = lib.licenses.free;
+        };
+      }) {};
     git-auto-commit-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "git-auto-commit-mode";
@@ -15199,22 +15241,22 @@
           license = lib.licenses.free;
         };
       }) {};
-    git-timemachine = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    git-timemachine = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "git-timemachine";
-        version = "3.0";
+        version = "4.4";
         src = fetchFromGitHub {
           owner = "pidu";
           repo = "git-timemachine";
-          rev = "7c66a878ee89861dcd59b5dfc598520daa156052";
-          sha256 = "1brz9dc7ngywndlxbqbi3pbjbjydgqc9bjzf05lgx0pzr1ppc3w3";
+          rev = "020d02cd77df6bf6f0efd4d4c597aad2083b6302";
+          sha256 = "1g7gxa2snh8ya8r3wim834qszhcmpp154gnvqkc3b1gw8x7jdrql";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/41e95e41fc429b688f0852f58ec6ce80303b68ce/recipes/git-timemachine";
           sha256 = "0nhl3g31r4a8j7rp5kbh17ixi16w32h80bc92vvjj3dlmk996nzq";
           name = "git-timemachine";
         };
-        packageRequires = [];
+        packageRequires = [ emacs ];
         meta = {
           homepage = "https://melpa.org/#/git-timemachine";
           license = lib.licenses.free;
@@ -16252,12 +16294,12 @@
     grab-x-link = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "grab-x-link";
-        version = "0.4.1";
+        version = "0.5";
         src = fetchFromGitHub {
           owner = "xuchunyang";
           repo = "grab-x-link";
-          rev = "d2ef886097f59e1facc5cb5d8cd1c77bf340be76";
-          sha256 = "1iny8ga9xb7pfd59l4ljlj6zvvxzr7bv468sibkhlaqvjljn2xq1";
+          rev = "d19f0c0da0ddc55005a4c1cdc2b8c5de8bea1e8c";
+          sha256 = "1l9jg2w8ym169b5dhg3k5vksbmicg4n1a55x7ddjysf8n887cpid";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/64d4d4e6f9d6a3ea670757f248afd355baf1d933/recipes/grab-x-link";
@@ -18462,6 +18504,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    helm-rg = callPackage ({ cl-lib ? null, dash, emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild }:
+    melpaBuild {
+        pname = "helm-rg";
+        version = "0.1";
+        src = fetchFromGitHub {
+          owner = "cosmicexplorer";
+          repo = "helm-rg";
+          rev = "96dcbeb366caa0b158668384113458ee5f7c4dfd";
+          sha256 = "1k9yv9iw694alf5w7555ygk2i1b26i90rqq7ny63a4nd3y5cbs5f";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/958fbafdcb214f1ec89fd0d84c6600c89890e0cf/recipes/helm-rg";
+          sha256 = "0gfq59540q9s6mr04q7dz638zqmqbqmbl1qaczddgmjn4vyjmf7v";
+          name = "helm-rg";
+        };
+        packageRequires = [ cl-lib dash emacs helm ];
+        meta = {
+          homepage = "https://melpa.org/#/helm-rg";
+          license = lib.licenses.free;
+        };
+      }) {};
     helm-robe = callPackage ({ fetchFromGitHub, fetchurl, helm, lib, melpaBuild }:
     melpaBuild {
         pname = "helm-robe";
@@ -18486,12 +18549,12 @@
     helm-rtags = callPackage ({ fetchFromGitHub, fetchurl, helm, lib, melpaBuild, rtags }:
     melpaBuild {
         pname = "helm-rtags";
-        version = "2.16";
+        version = "2.18";
         src = fetchFromGitHub {
           owner = "Andersbakken";
           repo = "rtags";
-          rev = "8ef7554852541eced514c56d5e39d6073f7a2ef9";
-          sha256 = "0hh9m0ykw3r9h4gv4a99px00py1h5hs86043mp1m0nmkjibf6w56";
+          rev = "98d668e85cf9ae84e775742752c5656dd2df2f17";
+          sha256 = "0raqjbkl1ykga4ahgl9xw49cgh3cyqcf42z36z7d6fz1fw192kg0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/helm-rtags";
@@ -18612,12 +18675,12 @@
     helm-system-packages = callPackage ({ emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, seq }:
     melpaBuild {
         pname = "helm-system-packages";
-        version = "1.7.0";
+        version = "1.8.0";
         src = fetchFromGitHub {
           owner = "emacs-helm";
           repo = "helm-system-packages";
-          rev = "22ff951b092a3fbde8eadf284a24e86bb4694f6a";
-          sha256 = "0argxi8dppgyfljwn654a7183lva74wnnwzkk3xlrvgngmir56kp";
+          rev = "beb7e488454402a122b9dec9a019ea190b9b7dc3";
+          sha256 = "0wclsv69v84d7bknnlralham94s7iqal7aczsvfxgj97hpwgywfz";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/0c46cfb0fcda0500e15d04106150a072a1a75ccc/recipes/helm-system-packages";
@@ -18756,22 +18819,22 @@
           license = lib.licenses.free;
         };
       }) {};
-    helpful = callPackage ({ dash, dash-functional, elisp-refs, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s, shut-up }:
+    helpful = callPackage ({ dash, dash-functional, elisp-refs, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, s, shut-up }:
     melpaBuild {
         pname = "helpful";
-        version = "0.6";
+        version = "0.7";
         src = fetchFromGitHub {
           owner = "Wilfred";
           repo = "helpful";
-          rev = "e1b660e2a48b39b0a81119c2593362dd60076757";
-          sha256 = "031hglxwlq8fryi8vs11hyflcrk09qc9qja28nqby0adn20z47mc";
+          rev = "3ae20551fb0ce199deff47534a475cab50f19237";
+          sha256 = "1zb2zfyflabhar8smvpxcdmkla7camaq2srq6dk2xc66226vj9rn";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/889d34b654de13bd413d46071a5ff191cbf3d157/recipes/helpful";
           sha256 = "17w9j5v1r2c8ka1fpzbr295cgnsbiw8fxlslh4zbjqzaazamchn2";
           name = "helpful";
         };
-        packageRequires = [ dash dash-functional elisp-refs emacs s shut-up ];
+        packageRequires = [ dash dash-functional elisp-refs emacs f s shut-up ];
         meta = {
           homepage = "https://melpa.org/#/helpful";
           license = lib.licenses.free;
@@ -19536,12 +19599,12 @@
     ialign = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "ialign";
-        version = "0.4.0";
+        version = "0.4.1";
         src = fetchFromGitHub {
           owner = "mkcms";
           repo = "interactive-align";
-          rev = "1d00ab870d06b946d94e5e6d340b85a3e51fbfb1";
-          sha256 = "191w5di4f0in49h60xmc5d6xaisbkv8y9f9bxzc3162c4b982qfr";
+          rev = "523df320197b587abd8c0ec4e9fbc763aeab1cf6";
+          sha256 = "04jak5j4yywl7fn5sggc125yh6cy0livf55194mfxs2kmbs5wm0h";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/072f1f7ce17e2972863bce10af9c52b3c6502eab/recipes/ialign";
@@ -20394,6 +20457,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    info-colors = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "info-colors";
+        version = "0.2";
+        src = fetchFromGitHub {
+          owner = "ubolonton";
+          repo = "info-colors";
+          rev = "13dd9b6a7288e6bb692b210bcb9cd72016658dae";
+          sha256 = "1h2q19574sc1lrxm9k78668pwcg3z17bnbgykmah01zlmbs264sx";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/d671ae8dc27439eea427e1848fc11c96ec5aee64/recipes/info-colors";
+          sha256 = "1mbabrfdy9xn7lpqivqm8prp83qmdv5r0acijwvxqd3a52aadc2x";
+          name = "info-colors";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/info-colors";
+          license = lib.licenses.free;
+        };
+      }) {};
     inherit-local = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "inherit-local";
@@ -20606,12 +20690,12 @@
     intero = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, flycheck, haskell-mode, lib, melpaBuild }:
     melpaBuild {
         pname = "intero";
-        version = "0.1.23";
+        version = "0.1.26";
         src = fetchFromGitHub {
           owner = "commercialhaskell";
           repo = "intero";
-          rev = "3865aad923559bee140eaede20c3510890979930";
-          sha256 = "1q6q2hnqf78kxd61nic4zjx7crbv8p25p4aq0h4vihamm8r0v7vm";
+          rev = "f85e1b47df3bb328be0de34120950cecb3465055";
+          sha256 = "1zng4sliygg1l0jamprx9pfs85jiy19gwxpcy2hs3s4hc7yxjdds";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/1b56ca344ad944e03b669a9974e9b734b5b445bb/recipes/intero";
@@ -20942,12 +21026,12 @@
     ivy-rtags = callPackage ({ fetchFromGitHub, fetchurl, ivy, lib, melpaBuild, rtags }:
     melpaBuild {
         pname = "ivy-rtags";
-        version = "2.16";
+        version = "2.18";
         src = fetchFromGitHub {
           owner = "Andersbakken";
           repo = "rtags";
-          rev = "8ef7554852541eced514c56d5e39d6073f7a2ef9";
-          sha256 = "0hh9m0ykw3r9h4gv4a99px00py1h5hs86043mp1m0nmkjibf6w56";
+          rev = "98d668e85cf9ae84e775742752c5656dd2df2f17";
+          sha256 = "0raqjbkl1ykga4ahgl9xw49cgh3cyqcf42z36z7d6fz1fw192kg0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/ivy-rtags";
@@ -21759,12 +21843,12 @@
     kaolin-themes = callPackage ({ autothemer, cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "kaolin-themes";
-        version = "1.2.1";
+        version = "1.3.0";
         src = fetchFromGitHub {
           owner = "ogdenwebb";
           repo = "emacs-kaolin-themes";
-          rev = "56bafd9b1b022ebfd98cad022792957164ec56fb";
-          sha256 = "02nmrdc2ldvfzyn3s9qrvq61nl93krc1vyr4ad1vkmbyqrwszyvd";
+          rev = "d730208cff185ee86a81f8a5a6feadfea78ab9cc";
+          sha256 = "0xfb8zi6jvwdivklc3lk5dzf8nnx05pm4fip44s4al6ajns8hgya";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/043a4e3bd5301ef8f4df2cbda0b3f4111eb399e4/recipes/kaolin-themes";
@@ -22323,6 +22407,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    lcr = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "lcr";
+        version = "0.9";
+        src = fetchFromGitHub {
+          owner = "jyp";
+          repo = "lcr";
+          rev = "3bc341205bba437c8fec4fefefaf39793c0405ae";
+          sha256 = "0jvdnb3fn33wq7ixb7ayrallq1j5gc9nh3i3nmy03yg11h60h1am";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/29374d3da932675b7b3e28ab8906690dad9c9cbe/recipes/lcr";
+          sha256 = "07syirjlrw8g95zk273953mnmg9x4bv8jpyvvzghhin4saiiiw3k";
+          name = "lcr";
+        };
+        packageRequires = [ dash emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/lcr";
+          license = lib.licenses.free;
+        };
+      }) {};
     leanote = callPackage ({ async, cl-lib ? null, emacs, fetchFromGitHub, fetchurl, let-alist, lib, melpaBuild, pcache, request, s }:
     melpaBuild {
         pname = "leanote";
@@ -22753,12 +22858,12 @@
     live-py-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "live-py-mode";
-        version = "2.21.0";
+        version = "2.21.1";
         src = fetchFromGitHub {
           owner = "donkirkby";
           repo = "live-py-plugin";
-          rev = "465c3f807c3ccd9af0af7032aec40c039d950ac0";
-          sha256 = "1idn0bjxw5sgjb7p958fdxn8mg2rs8yjqsz8k56r9jjzr7z9jdfx";
+          rev = "e0a5627e6591e1cbb9f93aabc44adbdc50b346c9";
+          sha256 = "0dhm7gdd1smlibj5jmzps97kwkpzcigbdp0l26baa2mkc6155y66";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/c7615237e80b46b5c50cb51a3ed5b07d92566fb7/recipes/live-py-mode";
@@ -23138,8 +23243,8 @@
           sha256 = "1zvib46hn2c0g2zdnf4vcwjrs9dj5sb81hpqm7bqm8f97p9dv6ym";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/0263ca6aea7bf6eae26a637454affbda6bd106df/recipes/magit";
-          sha256 = "03cmja9rcqc9250bsp1wwv94683mrcbnz1gjn8y7v62jlfi5qws5";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/b0a9a6277974a7a38c0c46d9921b54747a85501a/recipes/magit";
+          sha256 = "1wbqz2s1ips0kbhy6jv0mm4vh110m5r65rx0ik11dsqv1fv3hwga";
           name = "magit";
         };
         packageRequires = [
@@ -23242,12 +23347,12 @@
     magit-gh-pulls = callPackage ({ emacs, fetchFromGitHub, fetchurl, gh, lib, magit, melpaBuild, pcache, s }:
     melpaBuild {
         pname = "magit-gh-pulls";
-        version = "0.5.2";
+        version = "0.5.3";
         src = fetchFromGitHub {
           owner = "sigma";
           repo = "magit-gh-pulls";
-          rev = "e4a73781e3c1c7e4a09232b25e3474463cdf77b6";
-          sha256 = "19iqa2kzarpa75xy34hqvpy1y7dzx84pj540wwkj04dnpb4fwj2z";
+          rev = "d526f4c9ee1709c79f8a4630699ce1f25ae054e7";
+          sha256 = "11fd3c7wnqy08khj6za8spbsm3k1rqqih21lbax2iwvxl8jv4dv0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9b54fe4f51820c2f707e1f5d8a1128fff19a319c/recipes/magit-gh-pulls";
@@ -25682,13 +25787,13 @@
         pname = "notmuch";
         version = "0.26";
         src = fetchgit {
-          url = "git://git.notmuchmail.org/git/notmuch";
+          url = "https://git.notmuchmail.org/git/notmuch";
           rev = "3c4e64d976eb561ac5157df1bbe5882e3e65b583";
           sha256 = "00a9ggrc63n88g7vp57c09r859pl2dbxnqgf543ks94lm0jzyz3f";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/b19f21ed7485036e799ccd88edbf7896a379d759/recipes/notmuch";
-          sha256 = "173d1gf5rd4nbjwg91486ibg54n3qlpwgyvkcy4d30jm4vqwqrqv";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/d05fbde3aabfec4efdd19a33fd2b1297905acb5a/recipes/notmuch";
+          sha256 = "0pznpl0aqybdg4b2qypq6k4jac64sssqhgz6rvk9g2nkqhkds1x7";
           name = "notmuch";
         };
         packageRequires = [];
@@ -26075,27 +26180,6 @@
           license = lib.licenses.free;
         };
       }) {};
-    ob-spice = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, org, spice-mode }:
-    melpaBuild {
-        pname = "ob-spice";
-        version = "0.4.2";
-        src = fetchFromGitHub {
-          owner = "stardiviner";
-          repo = "ob-spice";
-          rev = "790faa67b0c57ca76e8814a1fa60b4dd774412c0";
-          sha256 = "0rn3j88ry38500vfaj0myx148nd5kh1jwja6j221ydd6v5wqws6d";
-        };
-        recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/ob-spice";
-          sha256 = "0nhdcvq7yvprz4323836k507w0g1lh3rdfr6dqrbj29yvsqfw0x2";
-          name = "ob-spice";
-        };
-        packageRequires = [ org spice-mode ];
-        meta = {
-          homepage = "https://melpa.org/#/ob-spice";
-          license = lib.licenses.free;
-        };
-      }) {};
     ob-translate = callPackage ({ fetchFromGitHub, fetchurl, google-translate, lib, melpaBuild, org }:
     melpaBuild {
         pname = "ob-translate";
@@ -26376,8 +26460,8 @@
         src = fetchFromGitHub {
           owner = "OmniSharp";
           repo = "omnisharp-emacs";
-          rev = "588b8482685adedbc56933cb13c58d9cc6a82456";
-          sha256 = "1iqwxc19jvcb2gsm2aq59zblg1qjmbxgb2yl3h3aybqp968j3i00";
+          rev = "7a6fe00e841106b17e7554f8a21f8457d12c5197";
+          sha256 = "1vrgj2irm87pykfjyx27a46g5xam7rxwjdfqh4jl6p8cgzgprrrg";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/e327c483be04de32638b420c5b4e043d12a2cd01/recipes/omnisharp";
@@ -28019,12 +28103,12 @@
     ox-epub = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, org }:
     melpaBuild {
         pname = "ox-epub";
-        version = "0.2.4";
+        version = "0.3";
         src = fetchFromGitHub {
           owner = "ofosos";
           repo = "ox-epub";
-          rev = "4b4585264a28152f2eda0f7e5ceed132f9d23e16";
-          sha256 = "1k3lv4qqkp87piwlwl3gahac1zpjzv397f65g4khbpby2kgg8dpi";
+          rev = "3d958203e169cbfb2204c43cb4c5543befec0b9d";
+          sha256 = "057sqmvm8hwkhcg3yd4i8zz2xlqsqrpyiklyiw750s3i5mxdn0k7";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/c3ac31dfef00e83fa6b716ea006f35afb5dc6cd5/recipes/ox-epub";
@@ -28331,6 +28415,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    panda-theme = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "panda-theme";
+        version = "0.1";
+        src = fetchFromGitHub {
+          owner = "jamiecollinson";
+          repo = "emacs-panda-theme";
+          rev = "ae24179e7a8a9667b169f00dbd891257530c1d22";
+          sha256 = "05vv4idl9h59jd089hpd09xcy1ix30bq0c4fif2b66170aychvii";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/a90ca1275ceab8e1ea4fdfa9049fbd24a5fd0bf5/recipes/panda-theme";
+          sha256 = "1q3zp331hz8l54p8ym9jrs4f36aj15r8aka6bqqnalnk237xqxl7";
+          name = "panda-theme";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/panda-theme";
+          license = lib.licenses.free;
+        };
+      }) {};
     pandoc = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "pandoc";
@@ -30811,6 +30916,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    pynt = callPackage ({ deferred, ein, emacs, epc, fetchFromGitHub, fetchurl, helm, lib, melpaBuild }:
+    melpaBuild {
+        pname = "pynt";
+        version = "1.0.0";
+        src = fetchFromGitHub {
+          owner = "ebanner";
+          repo = "pynt";
+          rev = "bc750cd244141005ea3b7bb87f75c6f6c5a5778f";
+          sha256 = "0mj8lkc40iv8d6afl4dba7gsbi0mgnx9ivanvczq6pxp5d4kgfsn";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/fdb297084188a957a46dcd036e65d9d893044bea/recipes/pynt";
+          sha256 = "07c0zc68r3pskn3bac3a8x5nrsykl90a1h22865g3i5vil76vvg3";
+          name = "pynt";
+        };
+        packageRequires = [ deferred ein emacs epc helm ];
+        meta = {
+          homepage = "https://melpa.org/#/pynt";
+          license = lib.licenses.free;
+        };
+      }) {};
     python-environment = callPackage ({ deferred, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "python-environment";
@@ -32206,12 +32332,12 @@
     rtags = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "rtags";
-        version = "2.16";
+        version = "2.18";
         src = fetchFromGitHub {
           owner = "Andersbakken";
           repo = "rtags";
-          rev = "8ef7554852541eced514c56d5e39d6073f7a2ef9";
-          sha256 = "0hh9m0ykw3r9h4gv4a99px00py1h5hs86043mp1m0nmkjibf6w56";
+          rev = "98d668e85cf9ae84e775742752c5656dd2df2f17";
+          sha256 = "0raqjbkl1ykga4ahgl9xw49cgh3cyqcf42z36z7d6fz1fw192kg0";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/rtags";
@@ -35248,12 +35374,12 @@
     swiper-helm = callPackage ({ emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, swiper }:
     melpaBuild {
         pname = "swiper-helm";
-        version = "0.1.0";
+        version = "0.2.0";
         src = fetchFromGitHub {
           owner = "abo-abo";
           repo = "swiper-helm";
-          rev = "f3d6dba865629eed8fb14f92dab1fad50734891b";
-          sha256 = "1y2dbd3ikdpjvi8xz10jkrx2773h7cgr6jxm5b2bldm81lvi8x64";
+          rev = "93fb6db87bc6a5967898b5fd3286954cc72a0008";
+          sha256 = "05n4h20lfyg1kis5rig72ajbz680ml5fmsy6l1w4g9jx2xybpll2";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/674c709490e13267e09417e08953ff76bfbaddb7/recipes/swiper-helm";
@@ -36192,12 +36318,12 @@
     tide = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild, s, typescript-mode }:
     melpaBuild {
         pname = "tide";
-        version = "2.6.2";
+        version = "2.7.1";
         src = fetchFromGitHub {
           owner = "ananthakumaran";
           repo = "tide";
-          rev = "1ee2e6e5f6e22b180af08264e5654b26599f96fe";
-          sha256 = "0gd149vlf3297lm595xw3hc9jd45wisbrpbr505qhkffrj60q1lq";
+          rev = "6ca5319cdd581d323944584242a1ba45a115ee3d";
+          sha256 = "1jcnzx8g742pfh9nv3gcsxdj31kfpjzl202by30pzg2xz54i48gb";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/a21e063011ebbb03ac70bdcf0a379f9e383bdfab/recipes/tide";
@@ -36380,12 +36506,12 @@
     transmission = callPackage ({ emacs, fetchFromGitHub, fetchurl, let-alist, lib, melpaBuild }:
     melpaBuild {
         pname = "transmission";
-        version = "0.12";
+        version = "0.12.1";
         src = fetchFromGitHub {
           owner = "holomorph";
           repo = "transmission";
-          rev = "0de5a5fa2438890ae9c2ca61999042ab175df3e9";
-          sha256 = "1wqlbbm71s1hvglsdp1qs7nvj6gnkjkai4rr8hhp1lliiyd5vmia";
+          rev = "03a36853f141387654b7cb9217c7417db096a083";
+          sha256 = "0kvg2gawsgy440x1fsl2c4pkxwp3zirq9rzixanklk0ryijhd3ry";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/9ed7e414687c0bd82b140a1bd8044084d094d18f/recipes/transmission";
@@ -36419,22 +36545,22 @@
           license = lib.licenses.free;
         };
       }) {};
-    treemacs = callPackage ({ ace-window, cl-lib ? null, dash, emacs, f, fetchFromGitHub, fetchurl, hydra, lib, melpaBuild, pfuture, s }:
+    treemacs = callPackage ({ ace-window, cl-lib ? null, dash, emacs, f, fetchFromGitHub, fetchurl, ht, hydra, lib, melpaBuild, pfuture, s }:
     melpaBuild {
         pname = "treemacs";
-        version = "1.16.1";
+        version = "1.18";
         src = fetchFromGitHub {
           owner = "Alexander-Miller";
           repo = "treemacs";
-          rev = "ef7597d5e99d50efd014bfa9f01046956d0da95f";
-          sha256 = "15379w0frxwl9p1xraqapn9r2wra75g8mjybj41jd1y65acjg9wg";
+          rev = "2bab3bfb6e75d44d42e1055c4e9bb44400a46475";
+          sha256 = "0zzm17cv1j25b2hj6vlqwi7iglqckijqbsvap0lkijimaipzpq52";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/7a680ee3b4a0ab286ac04d84b3fba7606b40c65b/recipes/treemacs";
           sha256 = "0zbnw48wrbq9g7vlwxapxpq9xz8cqyr63814w0pqnh6j40ia7r2a";
           name = "treemacs";
         };
-        packageRequires = [ ace-window cl-lib dash emacs f hydra pfuture s ];
+        packageRequires = [ ace-window cl-lib dash emacs f ht hydra pfuture s ];
         meta = {
           homepage = "https://melpa.org/#/treemacs";
           license = lib.licenses.free;
@@ -36443,12 +36569,12 @@
     treemacs-evil = callPackage ({ evil, fetchFromGitHub, fetchurl, lib, melpaBuild, treemacs }:
     melpaBuild {
         pname = "treemacs-evil";
-        version = "1.16.1";
+        version = "1.18";
         src = fetchFromGitHub {
           owner = "Alexander-Miller";
           repo = "treemacs";
-          rev = "ef7597d5e99d50efd014bfa9f01046956d0da95f";
-          sha256 = "15379w0frxwl9p1xraqapn9r2wra75g8mjybj41jd1y65acjg9wg";
+          rev = "2bab3bfb6e75d44d42e1055c4e9bb44400a46475";
+          sha256 = "0zzm17cv1j25b2hj6vlqwi7iglqckijqbsvap0lkijimaipzpq52";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/7a680ee3b4a0ab286ac04d84b3fba7606b40c65b/recipes/treemacs-evil";
@@ -36464,12 +36590,12 @@
     treemacs-projectile = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, projectile, treemacs }:
     melpaBuild {
         pname = "treemacs-projectile";
-        version = "1.16.1";
+        version = "1.18";
         src = fetchFromGitHub {
           owner = "Alexander-Miller";
           repo = "treemacs";
-          rev = "ef7597d5e99d50efd014bfa9f01046956d0da95f";
-          sha256 = "15379w0frxwl9p1xraqapn9r2wra75g8mjybj41jd1y65acjg9wg";
+          rev = "2bab3bfb6e75d44d42e1055c4e9bb44400a46475";
+          sha256 = "0zzm17cv1j25b2hj6vlqwi7iglqckijqbsvap0lkijimaipzpq52";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/7a680ee3b4a0ab286ac04d84b3fba7606b40c65b/recipes/treemacs-projectile";
@@ -37118,6 +37244,27 @@
           license = lib.licenses.free;
         };
       }) {};
+    usql = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
+    melpaBuild {
+        pname = "usql";
+        version = "0.0.1";
+        src = fetchFromGitHub {
+          owner = "nickbarnwell";
+          repo = "usql.el";
+          rev = "4cd8f4cf5c2e75485343321f02d621915aef10e8";
+          sha256 = "0cw25g8jvfjpzq3sabc3zbp0qynknzc0mq5psspcbxffk2qalbb9";
+        };
+        recipeFile = fetchurl {
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/c8f6b968312a09d062fcc8f942d29c93df2a5a3c/recipes/usql";
+          sha256 = "10ks164kcly5gkb2qmn700a51kph2sry4a64jwn60p5xl7w7af84";
+          name = "usql";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://melpa.org/#/usql";
+          license = lib.licenses.free;
+        };
+      }) {};
     utop = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "utop";
@@ -38863,12 +39010,12 @@
     xterm-color = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }:
     melpaBuild {
         pname = "xterm-color";
-        version = "1.6";
+        version = "1.7";
         src = fetchFromGitHub {
           owner = "atomontage";
           repo = "xterm-color";
-          rev = "ed3d0f4ccb2b28ff034192c50f244a97197d3911";
-          sha256 = "0djh18lm3xn9h4fa5ra0jrlzdzwhvhcalipj73j5gmmfaif4ya9q";
+          rev = "42374a98f1039e105cad9f16ce585dffc96a3f1c";
+          sha256 = "09mzzql76z3gn39qnfjspm8waps8msbkilmlk3n2zrizpbps6crj";
         };
         recipeFile = fetchurl {
           url = "https://raw.githubusercontent.com/milkypostman/melpa/b34a42f1bf5641871da8ce2b688325023262b643/recipes/xterm-color";
@@ -39137,13 +39284,13 @@
         pname = "yatex";
         version = "1.80";
         src = fetchhg {
-          url = "https://www.yatex.org/hgrepos/yatex/";
+          url = "https://www.yatex.org/hgrepos/yatex";
           rev = "b1896ef49747";
           sha256 = "1a8qc1krskl5qdy4fikilrrzrwmrghs4h1yaj5lclzywpc67zi8b";
         };
         recipeFile = fetchurl {
-          url = "https://raw.githubusercontent.com/milkypostman/melpa/e28710244a1bef8f56156fe1c271520896a9c694/recipes/yatex";
-          sha256 = "17np4am7yan1bh4706azf8in60c41158h3z591478j5b1w13y5a6";
+          url = "https://raw.githubusercontent.com/milkypostman/melpa/9854c39fc1889891fe460d0d5ac9224de3f6c635/recipes/yatex";
+          sha256 = "1qbqdsqf5s61hyyzx84csnby242n5sdcmcw55pa8r16j8kyzgrc0";
           name = "yatex";
         };
         packageRequires = [];
diff --git a/pkgs/applications/editors/emacs-modes/org-generated.nix b/pkgs/applications/editors/emacs-modes/org-generated.nix
index f74ae6ab3811..a8815b4d3d87 100644
--- a/pkgs/applications/editors/emacs-modes/org-generated.nix
+++ b/pkgs/applications/editors/emacs-modes/org-generated.nix
@@ -1,10 +1,10 @@
 { callPackage }: {
     org = callPackage ({ elpaBuild, fetchurl, lib }: elpaBuild {
         pname = "org";
-        version = "20180129";
+        version = "20180212";
         src = fetchurl {
-          url = "https://orgmode.org/elpa/org-20180129.tar";
-          sha256 = "0cwxqr34c77qmv7flcpd46qwkn0nzli21s3m9km00mwc8xy308n4";
+          url = "https://orgmode.org/elpa/org-20180212.tar";
+          sha256 = "09wgmiavby009mkc5v2d0znrrs40fnmhzq252hni4zjy8kbgwfzk";
         };
         packageRequires = [];
         meta = {
@@ -14,10 +14,10 @@
       }) {};
     org-plus-contrib = callPackage ({ elpaBuild, fetchurl, lib }: elpaBuild {
         pname = "org-plus-contrib";
-        version = "20180129";
+        version = "20180212";
         src = fetchurl {
-          url = "https://orgmode.org/elpa/org-plus-contrib-20180129.tar";
-          sha256 = "1bk7jmizlvfbq2bbis3kal8nllxj752a8dkq7j68q6kfbc6w1z24";
+          url = "https://orgmode.org/elpa/org-plus-contrib-20180212.tar";
+          sha256 = "0wy9j2iagjzzjkqfsz1askxg4jmaxc0p0f42jbzx2ja7h4qkm9nj";
         };
         packageRequires = [];
         meta = {
diff --git a/pkgs/applications/editors/emacs-modes/proofgeneral/HEAD.nix b/pkgs/applications/editors/emacs-modes/proofgeneral/HEAD.nix
index 1cdcb9b85544..de72b24f87ac 100644
--- a/pkgs/applications/editors/emacs-modes/proofgeneral/HEAD.nix
+++ b/pkgs/applications/editors/emacs-modes/proofgeneral/HEAD.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation (rec {
   name = "ProofGeneral-unstable-${version}";
-  version = "2017-11-06";
+  version = "2018-01-30";
 
   src = fetchFromGitHub {
     owner = "ProofGeneral";
     repo = "PG";
-    rev = "2eab72c33751768c8a6cde36b978ea4a36b91843";
-    sha256 = "1l3n48d6d4l5q3wkhdyp8dc6hzdw1ckdzr57dj8rdm78j87vh2cg";
+    rev = "945cada601c5729edd16fcc989a3969c8b34d20a";
+    sha256 = "1zjmbhq6c8g8b93nnsvr5pxx6mlcndb0fz152b2h80vfh9663cn8";
   };
 
   buildInputs = [ emacs texinfo perl which ] ++ stdenv.lib.optional enableDoc texLive;
diff --git a/pkgs/applications/editors/emacs/site-start.el b/pkgs/applications/editors/emacs/site-start.el
index b41ca92db086..cc1ab1d0e303 100644
--- a/pkgs/applications/editors/emacs/site-start.el
+++ b/pkgs/applications/editors/emacs/site-start.el
@@ -1,18 +1,39 @@
-;;; NixOS specific load-path
-(setq load-path
-      (append (reverse (mapcar (lambda (x) (concat x "/share/emacs/site-lisp/"))
-                               (split-string (or (getenv "NIX_PROFILES") ""))))
-              load-path))
+(defun nix--profile-paths ()
+  "Returns a list of all paths in the NIX_PROFILES environment
+variable, ordered from more-specific (the user profile) to the
+least specific (the system profile)"
+  (reverse (split-string (or (getenv "NIX_PROFILES") ""))))
+
+;;; Extend `load-path' to search for elisp files in subdirectories of
+;;; all folders in `NIX_PROFILES'. Also search for one level of
+;;; subdirectories in these directories to handle multi-file libraries
+;;; like `mu4e'.'
+(require 'seq)
+(let* ((subdirectory-sites (lambda (site-lisp)
+                             (when (file-exists-p site-lisp)
+                               (seq-filter (lambda (f) (file-directory-p (file-truename f)))
+                                           ;; Returns all files in `site-lisp', excluding `.' and `..'
+                                           (directory-files site-lisp 'full "^\\([^.]\\|\\.[^.]\\|\\.\\..\\)")))))
+       (paths (apply #'append
+                     (mapcar (lambda (profile-dir)
+                               (let ((site-lisp (concat profile-dir "/share/emacs/site-lisp/")))
+                                 (cons site-lisp (funcall subdirectory-sites site-lisp))))
+                             (nix--profile-paths)))))
+  (setq load-path (append paths load-path)))
+
 
 ;;; Make `woman' find the man pages
 (eval-after-load 'woman
   '(setq woman-manpath
-         (append (reverse (mapcar (lambda (x) (concat x "/share/man/"))
-                                  (split-string (or (getenv "NIX_PROFILES") ""))))
+         (append (mapcar (lambda (x) (concat x "/share/man/"))
+                         (nix--profile-paths))
                  woman-manpath)))
 
 ;;; Make tramp work for remote NixOS machines
 (eval-after-load 'tramp
+  ;; TODO: We should also add the other `NIX_PROFILES' to this path.
+  ;; However, these are user-specific, so we would need to discover
+  ;; them dynamically after connecting via `tramp'
   '(add-to-list 'tramp-remote-path "/run/current-system/sw/bin"))
 
 ;;; C source directory
@@ -22,9 +43,9 @@
 ;;; from: /nix/store/<hash>-emacs-<version>/share/emacs/site-lisp/site-start.el
 ;;; to:   /nix/store/<hash>-emacs-<version>/share/emacs/<version>/src/
 (let ((emacs
-       (file-name-directory                      ;; .../emacs/
-        (directory-file-name                     ;; .../emacs/site-lisp
-         (file-name-directory load-file-name)))) ;; .../emacs/site-lisp/
+       (file-name-directory                      ; .../emacs/
+        (directory-file-name                     ; .../emacs/site-lisp
+         (file-name-directory load-file-name)))) ; .../emacs/site-lisp/
       (version
        (file-name-as-directory
         (concat
diff --git a/pkgs/applications/editors/ghostwriter/default.nix b/pkgs/applications/editors/ghostwriter/default.nix
new file mode 100644
index 000000000000..491fc0ca2a8d
--- /dev/null
+++ b/pkgs/applications/editors/ghostwriter/default.nix
@@ -0,0 +1,26 @@
+{ stdenv, fetchFromGitHub, qmake, pkgconfig, qtwebkit, hunspell }:
+
+stdenv.mkDerivation rec {
+  pname = "ghostwriter";
+  version = "1.5.0";
+  name = "${pname}-${version}";
+
+  src = fetchFromGitHub {
+    owner = "wereturtle";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "0ixw2w2526836lwj4pc0vp7prp1gls7iq37v8m9ql1508b33b9pq";
+  };
+
+  nativeBuildInputs = [ qmake pkgconfig ];
+
+  buildInputs = [ qtwebkit hunspell ];
+
+  meta = with stdenv.lib; {
+    description = "A cross-platform, aesthetic, distraction-free Markdown editor";
+    homepage = src.meta.homepage;
+    license = licenses.gpl3Plus;
+    platforms = platforms.unix;
+    maintainers = with maintainers; [ dotlambda ];
+  };
+}
diff --git a/pkgs/applications/editors/jetbrains/default.nix b/pkgs/applications/editors/jetbrains/default.nix
index 6cd68b6f21d5..0e77094b819c 100644
--- a/pkgs/applications/editors/jetbrains/default.nix
+++ b/pkgs/applications/editors/jetbrains/default.nix
@@ -234,12 +234,12 @@ in
 
   clion = buildClion rec {
     name = "clion-${version}";
-    version = "2017.3.2"; /* updated by script */
+    version = "2017.3.3"; /* updated by script */
     description  = "C/C++ IDE. New. Intelligent. Cross-platform";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/cpp/CLion-${version}.tar.gz";
-      sha256 = "0lv0nwfgm6h67mxhh0a2154ym7wcbm1qp3k1k1i00lg0lwig1rcw"; /* updated by script */
+      sha256 = "0j090863y68ppw34qkldm8h4lpbhalhqn70gb0ifj9bglf17503d"; /* updated by script */
     };
     wmClass = "jetbrains-clion";
     update-channel = "CLion_Release"; # channel's id as in http://www.jetbrains.com/updates/updates.xml
@@ -273,12 +273,12 @@ in
 
   idea-community = buildIdea rec {
     name = "idea-community-${version}";
-    version = "2017.3.3"; /* updated by script */
+    version = "2017.3.4"; /* updated by script */
     description = "Integrated Development Environment (IDE) by Jetbrains, community edition";
     license = stdenv.lib.licenses.asl20;
     src = fetchurl {
       url = "https://download.jetbrains.com/idea/ideaIC-${version}.tar.gz";
-      sha256 = "1wxaz25609wri2d91s9wy00gngplyjg7gzix3mzdhgysm00qizf1"; /* updated by script */
+      sha256 = "15qsfirzmmjhwzkhx36zr4n0z5lhs021n2n3wim01g309ymr4gl9"; /* updated by script */
     };
     wmClass = "jetbrains-idea-ce";
     update-channel = "IDEA_Release";
@@ -286,12 +286,12 @@ in
 
   idea-ultimate = buildIdea rec {
     name = "idea-ultimate-${version}";
-    version = "2017.3.3"; /* updated by script */
+    version = "2017.3.4"; /* updated by script */
     description = "Integrated Development Environment (IDE) by Jetbrains, requires paid license";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/idea/ideaIU-${version}-no-jdk.tar.gz";
-      sha256 = "01d5a6m927q9bnjlpz8va8bfjnj52k8q6i3im5ygj6lwadbzawyf"; /* updated by script */
+      sha256 = "0f937s6zc1sv0gdlxf9kkc8l8rg78a5mxsfr2laab0g37rfy8c99"; /* updated by script */
     };
     wmClass = "jetbrains-idea";
     update-channel = "IDEA_Release";
@@ -299,12 +299,12 @@ in
 
   phpstorm = buildPhpStorm rec {
     name = "phpstorm-${version}";
-    version = "2017.3.3"; /* updated by script */
+    version = "2017.3.4"; /* updated by script */
     description = "Professional IDE for Web and PHP developers";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/webide/PhpStorm-${version}.tar.gz";
-      sha256 = "0mk4d2c41qvfz7sqxqw7adak86pm95wvhzxrfg32y01r5i5q0av7"; /* updated by script */
+      sha256 = "1hxkn0p0lp021bbysypwn8s69iggb76iwq38jv5a1ql7v5r1nwvd"; /* updated by script */
     };
     wmClass = "jetbrains-phpstorm";
     update-channel = "PS2017.3";
@@ -364,12 +364,12 @@ in
 
   webstorm = buildWebStorm rec {
     name = "webstorm-${version}";
-    version = "2017.3.3"; /* updated by script */
+    version = "2017.3.4"; /* updated by script */
     description = "Professional IDE for Web and JavaScript development";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/webstorm/WebStorm-${version}.tar.gz";
-      sha256 = "1fhs13944928rqcqbv8d29qm1y0zzry4drr9gqqmj814y2vkbpnl"; /* updated by script */
+      sha256 = "0d5whqa6c76l6g5yj0yq8a3k1x6d9kxwnac1dwsiy5dbr5jk0cyj"; /* updated by script */
     };
     wmClass = "jetbrains-webstorm";
     update-channel = "WS_Release";
diff --git a/pkgs/applications/editors/joe/default.nix b/pkgs/applications/editors/joe/default.nix
index d6c87c4991b9..b2ace8accd8a 100644
--- a/pkgs/applications/editors/joe/default.nix
+++ b/pkgs/applications/editors/joe/default.nix
@@ -1,17 +1,17 @@
 { stdenv, fetchurl } :
 
 stdenv.mkDerivation rec {
-  version = "4.4";
+  version = "4.6";
   name = "joe-${version}";
 
   src = fetchurl {
     url = "mirror://sourceforge/joe-editor/${name}.tar.gz";
-    sha256 = "0y898r1xlrv75m00y598rvwwsricabplyh80wawsqafapcl4hw55";
+    sha256 = "1pmr598xxxm9j9dl93kq4dv36zyw0q2dh6d7x07hf134y9hhlnj9";
   };
 
   meta = with stdenv.lib; {
     description = "A full featured terminal-based screen editor";
-    homepage = http://joe-editor.sourceforge.net;
+    homepage = https://joe-editor.sourceforge.io;
     license = licenses.gpl2;
     platforms = platforms.unix;
   };
diff --git a/pkgs/applications/editors/kakoune/default.nix b/pkgs/applications/editors/kakoune/default.nix
index 067aff5ee69b..404160668b45 100644
--- a/pkgs/applications/editors/kakoune/default.nix
+++ b/pkgs/applications/editors/kakoune/default.nix
@@ -1,17 +1,18 @@
-{ stdenv, fetchFromGitHub, ncurses, boost, asciidoc, docbook_xsl, libxslt }:
+{ stdenv, fetchFromGitHub, ncurses, boost, asciidoc, docbook_xsl, libxslt, pkgconfig }:
 
 with stdenv.lib;
 
 stdenv.mkDerivation rec {
   name = "kakoune-unstable-${version}";
-  version = "2017-04-12";
+  version = "2018-02-15";
   src = fetchFromGitHub {
     repo = "kakoune";
     owner = "mawww";
-    rev = "7482d117cc85523e840dff595134dcb9cdc62207";
-    sha256 = "08j611y192n9vln9i94ldlvz3k0sg79dkmfc0b1vczrmaxhpgpfh";
+    rev = "f5e39972eb525166dc5b1d963067f79990991a75";
+    sha256 = "160a302xg6nfzx49dkis6ij20kyzr63kxvcv8ld3l07l8k69g80r";
   };
-  buildInputs = [ ncurses boost asciidoc docbook_xsl libxslt ];
+  nativeBuildInputs = [ pkgconfig ];
+  buildInputs = [ ncurses asciidoc docbook_xsl libxslt ];
 
   postPatch = ''
     export PREFIX=$out
diff --git a/pkgs/applications/editors/leo-editor/default.nix b/pkgs/applications/editors/leo-editor/default.nix
index b05bbd053c1f..2084a047a086 100644
--- a/pkgs/applications/editors/leo-editor/default.nix
+++ b/pkgs/applications/editors/leo-editor/default.nix
@@ -1,20 +1,29 @@
-{ stdenv, python3Packages, fetchFromGitHub, makeWrapper, makeDesktopItem }:
+{ stdenv, python3, libsForQt56, fetchFromGitHub, makeWrapper, makeDesktopItem }:
 
+let
+  packageOverrides = self: super: {
+    pyqt56 = libsForQt56.callPackage ../../../development/python-modules/pyqt/5.x.nix {
+      pythonPackages = self;
+    };
+  };
+
+  pythonPackages = (python3.override { inherit packageOverrides; }).pkgs;
+in
 stdenv.mkDerivation rec {
   name = "leo-editor-${version}";
-  version = "5.5";
+  version = "5.6";
 
   src = fetchFromGitHub {
     owner = "leo-editor";
     repo = "leo-editor";
     rev = version;
-    sha256 = "0crzljirzfiy9xn02ydd23clmd8bzdjxkyxdqsvdkgfy9j41b8hr";
+    sha256 = "1k6q3gvaf05bi0mzkmmb1p6wrgxwri7ivn38p6f0m0wfd3f70x2j";
   };
 
   dontBuild = true;
 
-  nativeBuildInputs = [ makeWrapper python3Packages.python ];
-  propagatedBuildInputs = with python3Packages; [ pyqt5 ];
+  nativeBuildInputs = [ makeWrapper python3 ];
+  propagatedBuildInputs = with pythonPackages; [ pyqt56 docutils ];
 
   desktopItem = makeDesktopItem rec {
     name = "leo-editor";
@@ -50,7 +59,7 @@ stdenv.mkDerivation rec {
     mkdir -p $out/share/leo-editor
     mv * $out/share/leo-editor
 
-    makeWrapper ${python3Packages.python.interpreter} $out/bin/leo \
+    makeWrapper ${python3.interpreter} $out/bin/leo \
       --set PYTHONPATH "$PYTHONPATH:$out/share/leo-editor" \
       --add-flags "-O $out/share/leo-editor/launchLeo.py"
   '';
diff --git a/pkgs/applications/editors/neovim/wrapper.nix b/pkgs/applications/editors/neovim/wrapper.nix
index e2218473d723..187474de5b6f 100644
--- a/pkgs/applications/editors/neovim/wrapper.nix
+++ b/pkgs/applications/editors/neovim/wrapper.nix
@@ -1,6 +1,5 @@
-{ stdenv, lib, makeDesktopItem, makeWrapper, lndir
+{ stdenv, lib, makeDesktopItem, makeWrapper
 , vimUtils
-, neovim
 , bundlerEnv, ruby
 , pythonPackages
 , python3Packages
diff --git a/pkgs/applications/editors/rstudio/default.nix b/pkgs/applications/editors/rstudio/default.nix
index 6ff67728ea11..6b7881c490cf 100644
--- a/pkgs/applications/editors/rstudio/default.nix
+++ b/pkgs/applications/editors/rstudio/default.nix
@@ -4,7 +4,10 @@
 }:
 
 let
-  version = "1.1.414";
+  verMajor = "1";
+  verMinor = "1";
+  verPatch = "423";
+  version = "${verMajor}.${verMinor}.${verPatch}";
   ginVer = "1.5";
   gwtVer = "2.7.0";
 in
@@ -19,46 +22,30 @@ stdenv.mkDerivation rec {
     owner = "rstudio";
     repo = "rstudio";
     rev = "v${version}";
-    sha256 = "1rr2zkv53r8swhq5d745jpp0ivxpsizzh7srf34isqpkn5pgx3v8";
+    sha256 = "02kpmzh0vr0gb5dhiwcm4gwjbc3biwz0km655mgzmx9j64cyd3nf";
   };
 
   # Hack RStudio to only use the input R.
   patches = [ ./r-location.patch ];
   postPatch = "substituteInPlace src/cpp/core/r_util/REnvironmentPosix.cpp --replace '@R@' ${R}";
 
-  inherit ginVer;
   ginSrc = fetchurl {
     url = "https://s3.amazonaws.com/rstudio-buildtools/gin-${ginVer}.zip";
     sha256 = "155bjrgkf046b8ln6a55x06ryvm8agnnl7l8bkwwzqazbpmz8qgm";
   };
 
-  inherit gwtVer;
   gwtSrc = fetchurl {
     url = "https://s3.amazonaws.com/rstudio-buildtools/gwt-${gwtVer}.zip";
     sha256 = "1cs78z9a1jg698j2n35wsy07cy4fxcia9gi00x0r0qc3fcdhcrda";
   };
 
-  hunspellDictionaries = builtins.attrValues hunspellDicts;
+  hunspellDictionaries = with stdenv.lib; filter isDerivation (attrValues hunspellDicts);
 
   mathJaxSrc = fetchurl {
     url = https://s3.amazonaws.com/rstudio-buildtools/mathjax-26.zip;
     sha256 = "0wbcqb9rbfqqvvhqr1pbqax75wp8ydqdyhp91fbqfqp26xzjv6lk";
   };
 
-  rmarkdownSrc = fetchFromGitHub {
-    owner = "rstudio";
-    repo = "rmarkdown";
-    rev = "v1.8";
-    sha256 = "1blqxdr1vp2z5wd52nmf8hq36sdd4s2pyms441dqj50v35f8girb";
-  };
-
-  rsconnectSrc = fetchFromGitHub {
-    owner = "rstudio";
-    repo = "rsconnect";
-    rev = "953c945779dd180c1bfe68f41c173c13ec3e222d";
-    sha256 = "1yxwd9v4mvddh7m5rbljicmssw7glh1lhin7a9f01vxxa92vpj7z";
-  };
-
   rstudiolibclang = fetchurl {
     url = https://s3.amazonaws.com/rstudio-buildtools/libclang-3.5.zip;
     sha256 = "1sl5vb8misipwbbbykdymw172w9qrh8xv3p29g0bf3nzbnv6zc7c";
@@ -71,31 +58,31 @@ stdenv.mkDerivation rec {
 
   preConfigure =
     ''
+      export RSTUDIO_VERSION_MAJOR=${verMajor}
+      export RSTUDIO_VERSION_MINOR=${verMinor}
+      export RSTUDIO_VERSION_PATCH=${verPatch}
+
       GWT_LIB_DIR=src/gwt/lib
 
-      mkdir -p $GWT_LIB_DIR/gin/$ginVer
-      unzip $ginSrc -d $GWT_LIB_DIR/gin/$ginVer
+      mkdir -p $GWT_LIB_DIR/gin/${ginVer}
+      unzip ${ginSrc} -d $GWT_LIB_DIR/gin/${ginVer}
 
-      unzip $gwtSrc
+      unzip ${gwtSrc}
       mkdir -p $GWT_LIB_DIR/gwt
-      mv gwt-$gwtVer $GWT_LIB_DIR/gwt/$gwtVer
+      mv gwt-${gwtVer} $GWT_LIB_DIR/gwt/${gwtVer}
 
       mkdir dependencies/common/dictionaries
-      for dict in $hunspellDictionaries; do
-          for i in "$dict/share/hunspell/"*
-	  do ln -sv $i dependencies/common/dictionaries/
-	  done
+      for dict in ${builtins.concatStringsSep " " hunspellDictionaries}; do
+        for i in "$dict/share/hunspell/"*; do
+          ln -sv $i dependencies/common/dictionaries/
+        done
       done
 
-      unzip $mathJaxSrc -d dependencies/common/mathjax-26
-      mkdir -p dependencies/common/rmarkdown
-      ln -s $rmarkdownSrc dependencies/common/rmarkdown/
-      mkdir -p dependencies/common/rsconnect
-      ln -s $rsconnectSrc dependencies/common/rsconnect/
+      unzip ${mathJaxSrc} -d dependencies/common/mathjax-26
       mkdir -p dependencies/common/libclang/3.5
-      unzip $rstudiolibclang -d dependencies/common/libclang/3.5
+      unzip ${rstudiolibclang} -d dependencies/common/libclang/3.5
       mkdir -p dependencies/common/libclang/builtin-headers
-      unzip $rstudiolibclangheaders -d dependencies/common/libclang/builtin-headers
+      unzip ${rstudiolibclangheaders} -d dependencies/common/libclang/builtin-headers
 
       mkdir -p dependencies/common/pandoc
       cp ${pandoc}/bin/pandoc dependencies/common/pandoc/
diff --git a/pkgs/applications/editors/texstudio/default.nix b/pkgs/applications/editors/texstudio/default.nix
index fd973d4fbdee..03505ec11a5f 100644
--- a/pkgs/applications/editors/texstudio/default.nix
+++ b/pkgs/applications/editors/texstudio/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, qt4, qmake4Hook, poppler_qt4, zlib, pkgconfig}:
+{ stdenv, fetchurl, qt5, poppler_qt5, zlib, pkgconfig}:
 
 stdenv.mkDerivation rec {
   pname = "texstudio";
@@ -11,8 +11,8 @@ stdenv.mkDerivation rec {
     sha256 = "18rxd7ra5k2f7s4c296b3v3pqhxjmfix9xpy9i1g4jm87ygqrbnd";
   };
 
-  nativeBuildInputs = [ qmake4Hook pkgconfig ];
-  buildInputs = [ qt4 poppler_qt4 zlib ];
+  nativeBuildInputs = [ qt5.qmake pkgconfig ];
+  buildInputs = [ qt5.qtbase qt5.qtscript qt5.qtsvg poppler_qt5 zlib ];
 
   qmakeFlags = [ "NO_APPDATA=True" ];
 
@@ -25,7 +25,7 @@ stdenv.mkDerivation rec {
 	'';
     homepage = http://texstudio.sourceforge.net;
     license = licenses.gpl2Plus;
-    platforms = platforms.linux;
+    platforms = [ "x86_64-linux" ];
     maintainers = with maintainers; [ cfouche ];
   };
 }
diff --git a/pkgs/applications/editors/typora/default.nix b/pkgs/applications/editors/typora/default.nix
index 22e7c3d31b36..7c6d186b8830 100644
--- a/pkgs/applications/editors/typora/default.nix
+++ b/pkgs/applications/editors/typora/default.nix
@@ -3,18 +3,18 @@
 
 stdenv.mkDerivation rec {
   name = "typora-${version}";
-  version = "0.9.41";
+  version = "0.9.44";
 
   src =
     if stdenv.system == "x86_64-linux" then
       fetchurl {
         url = "https://www.typora.io/linux/typora_${version}_amd64.deb";
-        sha256 = "e4916f86c7c12aec8fd59b3ef79c2a4d3f77b02a0a9e962916c688871c9fda1d";
+        sha256 = "9442c090bf2619d270890228abd7dabb9e217c0b200615f8ed3cb255efd122d5";
       }
     else
       fetchurl {
         url = "https://www.typora.io/linux/typora_${version}_i386.deb";
-        sha256 = "18960fb4b2cd6cf9cb77025a4035a3258f1599b1d225fb673b49c1588fa272d6";
+        sha256 = "ae228ca946d03940b85df30c995c4de3f942a780e32d4dcab872dec671c66ef3";
       }
     ;
 
diff --git a/pkgs/applications/editors/vim/macvim.nix b/pkgs/applications/editors/vim/macvim.nix
index 144fb5428a51..b6c03a57b561 100644
--- a/pkgs/applications/editors/vim/macvim.nix
+++ b/pkgs/applications/editors/vim/macvim.nix
@@ -103,6 +103,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = with stdenv.lib; {
+    broken = true; # needs ruby 2.2
     description = "Vim - the text editor - for macOS";
     homepage    = https://github.com/b4winckler/macvim;
     license = licenses.vim;
diff --git a/pkgs/applications/editors/vscode/default.nix b/pkgs/applications/editors/vscode/default.nix
index 5f1d5c50d4e5..4c825cc9891a 100644
--- a/pkgs/applications/editors/vscode/default.nix
+++ b/pkgs/applications/editors/vscode/default.nix
@@ -2,7 +2,7 @@
   makeWrapper, libXScrnSaver, libxkbfile, libsecret }:
 
 let
-  version = "1.19.3";
+  version = "1.20.1";
   channel = "stable";
 
   plat = {
@@ -12,9 +12,9 @@ let
   }.${stdenv.system};
 
   sha256 = {
-    "i686-linux" = "0qaijcsjy9sysim19gyqmagg8rmxgamf0l74qj3ap0wsv2v7xixr";
-    "x86_64-linux" = "1kvkcrr1hgnssy2z45h8fdgr9j6w94myr2hvlknwcahzxrnrwr7k";
-    "x86_64-darwin" = "19vkv97yq0alnq4dvs62a2vx3f1mvfz1ic63114s9sd6smikrg0g";
+    "i686-linux" = "0gycz857bl9ikfrylim970qgmyw7rcy3gbg2zsjddp9cgdk9basn";
+    "x86_64-linux" = "0rx0qyxv173s9wjw97f94h61f12lh42grnmabgsvwd87b8zx4qim";
+    "x86_64-darwin" = "0mqxmmkp3bsmy1g35prsgan61zzq5368gp720v37cwx1rskl0bfg";
   }.${stdenv.system};
 
   archive_fmt = if stdenv.system == "x86_64-darwin" then "zip" else "tar.gz";
diff --git a/pkgs/applications/graphics/antimony/default.nix b/pkgs/applications/graphics/antimony/default.nix
index b7d9f4a81599..f9ea2b9aa84e 100644
--- a/pkgs/applications/graphics/antimony/default.nix
+++ b/pkgs/applications/graphics/antimony/default.nix
@@ -1,10 +1,10 @@
 { stdenv, fetchFromGitHub, libpng, python3, boost, mesa, qtbase, ncurses, cmake, flex, lemon }:
 
 let
-  gitRev    = "e8480c718e8c49ae3cc2d7af10ea93ea4c2fff9a";
+  gitRev    = "020910c25614a3752383511ede5a1f5551a8bd39";
   gitBranch = "master";
-  gitTag    = "0.9.2";
-in 
+  gitTag    = "0.9.3";
+in
   stdenv.mkDerivation rec {
     name    = "antimony-${version}";
     version = gitTag;
@@ -13,7 +13,7 @@ in
       owner = "mkeeter";
       repo = "antimony";
       rev = gitTag;
-      sha256 = "0fpgy5cb4knz2z9q078206k8wzxfs8b9g76mf4bz1ic77931ykjz";
+      sha256 = "1vm5h5py8l3b8h4pbmm8s3wlxvlw492xfwnlwx0nvl0cjs8ba6r4";
     };
 
     patches = [ ./paths-fix.patch ];
diff --git a/pkgs/applications/graphics/darktable/default.nix b/pkgs/applications/graphics/darktable/default.nix
index 787ddc72ec9a..e9932b93fbe0 100644
--- a/pkgs/applications/graphics/darktable/default.nix
+++ b/pkgs/applications/graphics/darktable/default.nix
@@ -1,15 +1,10 @@
-{ stdenv, fetchurl, libsoup, graphicsmagick, SDL, json_glib
-, GConf, atk, cairo, cmake, curl, dbus_glib, exiv2, glib
-, libgnome_keyring, gtk3, ilmbase, intltool, lcms, lcms2
-, lensfun, libXau, libXdmcp, libexif, libglade, libgphoto2, libjpeg
-, libpng, libpthreadstubs, librsvg, libtiff, libxcb
-, openexr, osm-gps-map, pixman, pkgconfig, sqlite, bash, libxslt, openjpeg
-, mesa, lua, pugixml, colord, colord-gtk, libxshmfence, libxkbcommon
-, epoxy, at_spi2_core, libwebp, libsecret, wrapGAppsHook, gnome3
+{ stdenv, fetchurl, libsoup, graphicsmagick, json_glib, wrapGAppsHook
+, cairo, cmake, ninja, curl, perl, llvm, desktop_file_utils, exiv2, glib
+, ilmbase, gtk3, intltool, lcms2, lensfun, libX11, libexif, libgphoto2, libjpeg
+, libpng, librsvg, libtiff, openexr, osm-gps-map, pkgconfig, sqlite, libxslt
+, openjpeg, lua, pugixml, colord, colord-gtk, libwebp, libsecret, gnome3
 }:
 
-assert stdenv ? glibc;
-
 stdenv.mkDerivation rec {
   version = "2.4.1";
   name = "darktable-${version}";
@@ -19,16 +14,15 @@ stdenv.mkDerivation rec {
     sha256 = "014pq80i5k1kdvvrl7xrgaaq3i4fzv09h7a3pwzlp2ahkczwcm32";
   };
 
-  buildInputs =
-    [ GConf atk cairo cmake curl dbus_glib exiv2 glib libgnome_keyring gtk3
-      ilmbase intltool lcms lcms2 lensfun libXau libXdmcp libexif
-      libglade libgphoto2 libjpeg libpng libpthreadstubs
-      librsvg libtiff libxcb openexr pixman pkgconfig sqlite libxslt
-      libsoup graphicsmagick SDL json_glib openjpeg mesa lua pugixml
-      colord colord-gtk libxshmfence libxkbcommon epoxy at_spi2_core
-      libwebp libsecret wrapGAppsHook gnome3.adwaita-icon-theme
-      osm-gps-map
-    ];
+  nativeBuildInputs = [ cmake ninja llvm pkgconfig intltool perl desktop_file_utils wrapGAppsHook ];
+
+  buildInputs = [
+    cairo curl exiv2 glib gtk3 ilmbase lcms2 lensfun libX11 libexif
+    libgphoto2 libjpeg libpng librsvg libtiff openexr sqlite libxslt
+    libsoup graphicsmagick json_glib openjpeg lua pugixml
+    colord colord-gtk libwebp libsecret gnome3.adwaita-icon-theme
+    osm-gps-map
+  ];
 
   cmakeFlags = [
     "-DBUILD_USERMANUAL=False"
diff --git a/pkgs/applications/graphics/freecad/default.nix b/pkgs/applications/graphics/freecad/default.nix
index 80f893e7c3c9..d517306c1d61 100644
--- a/pkgs/applications/graphics/freecad/default.nix
+++ b/pkgs/applications/graphics/freecad/default.nix
@@ -1,5 +1,5 @@
 { stdenv, fetchurl, cmake, coin3d, xercesc, ode, eigen, qt4, opencascade, gts
-, boost, zlib, python27Packages, swig, gfortran, soqt, libf2c, makeWrapper }:
+, boost, zlib, python27Packages, swig, gfortran, soqt, libf2c, makeWrapper, makeDesktopItem }:
 
 let
   pythonPackages = python27Packages;
@@ -32,8 +32,40 @@ in stdenv.mkDerivation rec {
   postInstall = ''
     wrapProgram $out/bin/FreeCAD --prefix PYTHONPATH : $PYTHONPATH \
       --set COIN_GL_NO_CURRENT_CONTEXT_CHECK 1
+
+    mkdir -p $out/share/mime/packages
+    cat << EOF > $out/share/mime/packages/freecad.xml
+    <?xml version="1.0" encoding="UTF-8"?>
+    <mime-info xmlns='http://www.freedesktop.org/standards/shared-mime-info'>
+      <mime-type type="application/x-extension-fcstd">
+        <sub-class-of type="application/zip"/>
+        <comment>FreeCAD Document</comment>
+        <glob pattern="*.fcstd"/>
+      </mime-type>
+    </mime-info>
+    EOF
+
+    mkdir -p $out/share/applications
+    cp $desktopItem/share/applications/* $out/share/applications/
+    for entry in $out/share/applications/*.desktop; do
+      substituteAllInPlace $entry
+    done
   '';
 
+  desktopItem = makeDesktopItem {
+    name = "freecad";
+    desktopName = "FreeCAD";
+    genericName = "CAD Application";
+    comment = meta.description;
+    exec = "@out@/bin/FreeCAD %F";
+    categories = "Science;Education;Engineering;";
+    startupNotify = "true";
+    mimeType = "application/x-extension-fcstd;";
+    extraEntries = ''
+      Path=@out@/share/freecad
+    '';
+  };
+
   meta = with stdenv.lib; {
     description = "General purpose Open Source 3D CAD/MCAD/CAx/CAE/PLM modeler";
     homepage = https://www.freecadweb.org/;
diff --git a/pkgs/applications/kde/fetch.sh b/pkgs/applications/kde/fetch.sh
index 1c1a0102dd06..724f252907cb 100644
--- a/pkgs/applications/kde/fetch.sh
+++ b/pkgs/applications/kde/fetch.sh
@@ -1 +1 @@
-WGET_ARGS=( https://download.kde.org/stable/applications/17.12.1/ -A '*.tar.xz' )
+WGET_ARGS=( https://download.kde.org/stable/applications/17.12.2/ -A '*.tar.xz' )
diff --git a/pkgs/applications/kde/srcs.nix b/pkgs/applications/kde/srcs.nix
index 781a59786759..ff6b1803e13a 100644
--- a/pkgs/applications/kde/srcs.nix
+++ b/pkgs/applications/kde/srcs.nix
@@ -3,1691 +3,1691 @@
 
 {
   akonadi = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/akonadi-17.12.1.tar.xz";
-      sha256 = "0iaw6kmbi68wd728v6m5w90xy9v0nqgd66n026r5dy64pm08hj0x";
-      name = "akonadi-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/akonadi-17.12.2.tar.xz";
+      sha256 = "03cz5jl5qywc39krjrzby7yxcrx4iaf94pkvzbkagx1c7bfgajkf";
+      name = "akonadi-17.12.2.tar.xz";
     };
   };
   akonadi-calendar = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/akonadi-calendar-17.12.1.tar.xz";
-      sha256 = "0j32xxglksya014c2199bn5k540zllmlsyvvr6jcmvbfpcilnl7d";
-      name = "akonadi-calendar-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/akonadi-calendar-17.12.2.tar.xz";
+      sha256 = "1j2bs3ybl2lz3yr862kz4jnkiksawbyv96lsjvzgkalmri3y2jv9";
+      name = "akonadi-calendar-17.12.2.tar.xz";
     };
   };
   akonadi-calendar-tools = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/akonadi-calendar-tools-17.12.1.tar.xz";
-      sha256 = "0yk59hq0fflmv18w7i6jx48436ykhgc1q5agbjckfw9g9qfmaj04";
-      name = "akonadi-calendar-tools-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/akonadi-calendar-tools-17.12.2.tar.xz";
+      sha256 = "0fh7zsf4ckmikqqwa3zqdd97i80s53r56bx8q0aj1dyxa5kzrid6";
+      name = "akonadi-calendar-tools-17.12.2.tar.xz";
     };
   };
   akonadiconsole = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/akonadiconsole-17.12.1.tar.xz";
-      sha256 = "1x1cazikj7a3paf93ms2wl9cbbqhr43jpk7ijb6wjnhzv0jx0yv0";
-      name = "akonadiconsole-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/akonadiconsole-17.12.2.tar.xz";
+      sha256 = "00w21nxbq9a9h1cs4wl0641hj82i3w63r9ab5hb9kw33gi9ijali";
+      name = "akonadiconsole-17.12.2.tar.xz";
     };
   };
   akonadi-contacts = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/akonadi-contacts-17.12.1.tar.xz";
-      sha256 = "12gvzwxhazwz6cn07vz2v21nh31nnxq5ckvm9bw94amhxdcrhji1";
-      name = "akonadi-contacts-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/akonadi-contacts-17.12.2.tar.xz";
+      sha256 = "1v8082walg47bl8rj6zcp2br4wr0mhrw82l0aw41gmcwi2vr4pr7";
+      name = "akonadi-contacts-17.12.2.tar.xz";
     };
   };
   akonadi-import-wizard = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/akonadi-import-wizard-17.12.1.tar.xz";
-      sha256 = "1v4sqmlbkvhi14bjpg88017slsmsingk3lcvl1hpi9wh5chhybs2";
-      name = "akonadi-import-wizard-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/akonadi-import-wizard-17.12.2.tar.xz";
+      sha256 = "1yflksmvvysl3p3s37i0qc712cdzkzi501x74mk3c7sy1pw097g4";
+      name = "akonadi-import-wizard-17.12.2.tar.xz";
     };
   };
   akonadi-mime = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/akonadi-mime-17.12.1.tar.xz";
-      sha256 = "0y0s4qaa00240czq1mgm3p63cagdn4kv0njwhlh5va6jknb56rsq";
-      name = "akonadi-mime-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/akonadi-mime-17.12.2.tar.xz";
+      sha256 = "0xsm87nph967293ixwnh1450qwrn0ghfcw34444fj8f4ciwbv0iv";
+      name = "akonadi-mime-17.12.2.tar.xz";
     };
   };
   akonadi-notes = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/akonadi-notes-17.12.1.tar.xz";
-      sha256 = "1ylbrz5p5y80j7carlqwpxw222faf1ri7lyhnl09j1xsiaw74jz1";
-      name = "akonadi-notes-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/akonadi-notes-17.12.2.tar.xz";
+      sha256 = "06ac7b1n3aaad7y1cbby44jaq748xnxfjd51c1jh0p257q22qj85";
+      name = "akonadi-notes-17.12.2.tar.xz";
     };
   };
   akonadi-search = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/akonadi-search-17.12.1.tar.xz";
-      sha256 = "14blwxccz36qdmahwz14vnd7a5j01xpzijc3bbw768l1ifxac5sp";
-      name = "akonadi-search-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/akonadi-search-17.12.2.tar.xz";
+      sha256 = "0g03z7xcbl25ylrflgkycfgyvny5hr8i38flirw9jidwy5zf1pny";
+      name = "akonadi-search-17.12.2.tar.xz";
     };
   };
   akregator = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/akregator-17.12.1.tar.xz";
-      sha256 = "03292r4l2wpsikrngldmkvjl75ijpy9sfwr14r2kk0rbkqpzn7gn";
-      name = "akregator-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/akregator-17.12.2.tar.xz";
+      sha256 = "19grppwmspn7x84ygxscch3ydr5i6nanshi1pk4wr5z34g8qcxrc";
+      name = "akregator-17.12.2.tar.xz";
     };
   };
   analitza = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/analitza-17.12.1.tar.xz";
-      sha256 = "1zp3xki1jppqzpsjxv0mif44hx5amdk9w9a8h1h9wbdwf9zn7038";
-      name = "analitza-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/analitza-17.12.2.tar.xz";
+      sha256 = "128qcnzizcvrc1mknb5qdzricymxai2mxlrxb5h93cc14jwiivg1";
+      name = "analitza-17.12.2.tar.xz";
     };
   };
   ark = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ark-17.12.1.tar.xz";
-      sha256 = "0xxahw4qysynim32pi4f3kzvpn8fikii3nxdjk1f58cs7ylk7h9h";
-      name = "ark-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ark-17.12.2.tar.xz";
+      sha256 = "0xh60mf1ygyhcc06w8g4nnrhqyjf88ji3kf8d5vfpdijq8m6gg8b";
+      name = "ark-17.12.2.tar.xz";
     };
   };
   artikulate = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/artikulate-17.12.1.tar.xz";
-      sha256 = "1f99gdjlrfxfii605d58566qkzg0vwbdj2sl7gaf2n8974qih26l";
-      name = "artikulate-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/artikulate-17.12.2.tar.xz";
+      sha256 = "0plc81c7sc47392x183q30x39ksjr1wnjhlwy0ixngj2q9nhi6nn";
+      name = "artikulate-17.12.2.tar.xz";
     };
   };
   audiocd-kio = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/audiocd-kio-17.12.1.tar.xz";
-      sha256 = "1q5rl3h5vlqa16wsa2zqapqycnbqcsfskkgh47pklsbzi49p2b7w";
-      name = "audiocd-kio-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/audiocd-kio-17.12.2.tar.xz";
+      sha256 = "1n3n3ylwdm5yjv0hh43rmn3bn0q32xsbrl5wlbwgiijhpqd0ahkw";
+      name = "audiocd-kio-17.12.2.tar.xz";
     };
   };
   baloo-widgets = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/baloo-widgets-17.12.1.tar.xz";
-      sha256 = "1w681fxjimwnywx6dbk7486ncwgq4izj7r4q5ahism10kxjyvy1i";
-      name = "baloo-widgets-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/baloo-widgets-17.12.2.tar.xz";
+      sha256 = "0pw153cy606dggkq2njk6fs5yp6a9jlkwpp7vckd9jl5s6pbsqd2";
+      name = "baloo-widgets-17.12.2.tar.xz";
     };
   };
   blinken = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/blinken-17.12.1.tar.xz";
-      sha256 = "0935gyc499j1br0g1knkpzr73q44mqfr89rjnl5ax6cncs6kkwcd";
-      name = "blinken-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/blinken-17.12.2.tar.xz";
+      sha256 = "008pmr3g553xd4mcdmby0fqzp8vk651dji3c8zkad94560xysm71";
+      name = "blinken-17.12.2.tar.xz";
     };
   };
   bomber = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/bomber-17.12.1.tar.xz";
-      sha256 = "1jmkzq07rq19dzci1p3zida12yamn3rsd1l7zy75skwm43q8210r";
-      name = "bomber-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/bomber-17.12.2.tar.xz";
+      sha256 = "1rdxr7w2p3r1gviqsmshx6n07gzsc3ymz6drhqk3kacqwgnnr72y";
+      name = "bomber-17.12.2.tar.xz";
     };
   };
   bovo = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/bovo-17.12.1.tar.xz";
-      sha256 = "0fa0cp3w2khvsg5rvnhn9yrx7pg0qvgd3grk7dbzv9frs3nc8k8a";
-      name = "bovo-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/bovo-17.12.2.tar.xz";
+      sha256 = "0rhj0w7li1rsfjmrivr6g6z9ja408v59pk5rpci4344piaqglrqm";
+      name = "bovo-17.12.2.tar.xz";
     };
   };
   calendarsupport = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/calendarsupport-17.12.1.tar.xz";
-      sha256 = "02g845mnyyjma9kadi9j1y774nb157qk4s9xfh414j35wa4n4ml0";
-      name = "calendarsupport-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/calendarsupport-17.12.2.tar.xz";
+      sha256 = "0c6i8gqjdgc9s3mz351qjxwv6fsk3098i7ni6x4bhh5shg863vnr";
+      name = "calendarsupport-17.12.2.tar.xz";
     };
   };
   cantor = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/cantor-17.12.1.tar.xz";
-      sha256 = "1jxjv729js6na70nc8rmr65ah4bvly27qndv1g4grzyv1j5v9pwa";
-      name = "cantor-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/cantor-17.12.2.tar.xz";
+      sha256 = "1b055fcbpqs4fwwyj0pywv5y8pfpg3ha5382d4hhrpvpc8xwjn6c";
+      name = "cantor-17.12.2.tar.xz";
     };
   };
   cervisia = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/cervisia-17.12.1.tar.xz";
-      sha256 = "1jjc2iarpl6vinav20rly9b2ha3d35ipm45mmn6hdqwrgh08x61a";
-      name = "cervisia-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/cervisia-17.12.2.tar.xz";
+      sha256 = "1iqkp7d3wkmi0wfxsx2k20qblkmk6m1ndh472bxn6vvfaii2dqmm";
+      name = "cervisia-17.12.2.tar.xz";
     };
   };
   dolphin = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/dolphin-17.12.1.tar.xz";
-      sha256 = "0pyajijsadkl1yky0p66d0sglxp7ks1bl23x4xy5zhdv3clr5gzc";
-      name = "dolphin-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/dolphin-17.12.2.tar.xz";
+      sha256 = "1pmfix569996minfc8rrjdbfvybm1a5bnljk0gxybahlainxwjp4";
+      name = "dolphin-17.12.2.tar.xz";
     };
   };
   dolphin-plugins = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/dolphin-plugins-17.12.1.tar.xz";
-      sha256 = "1igyk2jx2rsgy7rbxi84fkhi831a2v4fg0bc08ad36y43cm849zh";
-      name = "dolphin-plugins-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/dolphin-plugins-17.12.2.tar.xz";
+      sha256 = "03637pxjf0kjbw831vvdj3lk3msvn6y3gkildsr1490v60cl2f2c";
+      name = "dolphin-plugins-17.12.2.tar.xz";
     };
   };
   dragon = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/dragon-17.12.1.tar.xz";
-      sha256 = "02apbhw98sq817660ldb1gdzna4jjb2v6379mvrb2d1qgigh1afd";
-      name = "dragon-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/dragon-17.12.2.tar.xz";
+      sha256 = "03z263agwrkpqf1l3xpfmgxjzqs6icwxv22bp5shzlyiq5dvmq0d";
+      name = "dragon-17.12.2.tar.xz";
     };
   };
   eventviews = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/eventviews-17.12.1.tar.xz";
-      sha256 = "1cga2i941x1rgp4i8aff8vr7hlk4q312pynr44hfidx4vjig9ia9";
-      name = "eventviews-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/eventviews-17.12.2.tar.xz";
+      sha256 = "1y1d8flzmi3mm15gc2q2925f1z17lcm5b8difd65z7rji4ra9rg6";
+      name = "eventviews-17.12.2.tar.xz";
     };
   };
   ffmpegthumbs = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ffmpegthumbs-17.12.1.tar.xz";
-      sha256 = "0lmd8papahnqr5c830wqz8bhkvdsads97b23dnzhnck78dinww2s";
-      name = "ffmpegthumbs-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ffmpegthumbs-17.12.2.tar.xz";
+      sha256 = "098w62hvjqkq9iixbipg1wl0091d0fnb49jm874k4d68mpvlmmf2";
+      name = "ffmpegthumbs-17.12.2.tar.xz";
     };
   };
   filelight = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/filelight-17.12.1.tar.xz";
-      sha256 = "0c0fi9dziwf5v7069wsrqnqw95cfpicg4a6xp05hhpc9qqkvdngk";
-      name = "filelight-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/filelight-17.12.2.tar.xz";
+      sha256 = "1ysh5rb9irgha62iw1yiw5f4fxanym9swgc8sd9cdlmkqm6km27m";
+      name = "filelight-17.12.2.tar.xz";
     };
   };
   granatier = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/granatier-17.12.1.tar.xz";
-      sha256 = "1ja7v2xr2yyw2qh7zkf2s7ym8qv5gfr1zbii54dk2r5k4a8slvi4";
-      name = "granatier-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/granatier-17.12.2.tar.xz";
+      sha256 = "1c86vh6jx991ig1n6n591r9va8rs029gd83m6y9appavi43aylkv";
+      name = "granatier-17.12.2.tar.xz";
     };
   };
   grantlee-editor = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/grantlee-editor-17.12.1.tar.xz";
-      sha256 = "19w2f30rsk65xdc8kqr03fmkm0a743mgyj6gm6207nxsm5plr3nv";
-      name = "grantlee-editor-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/grantlee-editor-17.12.2.tar.xz";
+      sha256 = "1x4rn8liz083y8h3in743xrmk3caqcn75ba97f8ymaap0f48nly6";
+      name = "grantlee-editor-17.12.2.tar.xz";
     };
   };
   grantleetheme = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/grantleetheme-17.12.1.tar.xz";
-      sha256 = "1nga48vvqysbh2g10wka02ibbyny77wrz8a1p336sycr76q1xmcz";
-      name = "grantleetheme-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/grantleetheme-17.12.2.tar.xz";
+      sha256 = "0cpmd8glpjpg62h2qcngaks6adahfcbf9aikm9y4gwqbsmglqjkx";
+      name = "grantleetheme-17.12.2.tar.xz";
     };
   };
   gwenview = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/gwenview-17.12.1.tar.xz";
-      sha256 = "1a87b6wh2ga9j8r498zyf2dga77lhky41dl31ndkx94vm8ycdnlv";
-      name = "gwenview-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/gwenview-17.12.2.tar.xz";
+      sha256 = "0cpv7wlbkm20vch1d4m49kxk02by9zh9lbdcli5p6bgp8mnvpxgr";
+      name = "gwenview-17.12.2.tar.xz";
     };
   };
   incidenceeditor = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/incidenceeditor-17.12.1.tar.xz";
-      sha256 = "0x7c3j8frzqmvgz6zn98h0qiays1fdvnlngdksi7gkm82bsvk7i2";
-      name = "incidenceeditor-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/incidenceeditor-17.12.2.tar.xz";
+      sha256 = "1qlghzfc4lg69p5014f3zj6k0lgy57n0lg063b804nqy0378xra2";
+      name = "incidenceeditor-17.12.2.tar.xz";
     };
   };
   juk = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/juk-17.12.1.tar.xz";
-      sha256 = "13k7j7h62mggfj79a534m58rl9fd2vzhvv0wj7752n4nbiha6q3q";
-      name = "juk-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/juk-17.12.2.tar.xz";
+      sha256 = "1wa52sysy3hr7n5r59vb9qqnac73fcy2dc3zl51ba9da8lz8q0lj";
+      name = "juk-17.12.2.tar.xz";
     };
   };
   k3b = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/k3b-17.12.1.tar.xz";
-      sha256 = "11jsfja3r9x6drs0v1nb4h9w6hl3ab7rxjcxm8czbwmx2897vgyg";
-      name = "k3b-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/k3b-17.12.2.tar.xz";
+      sha256 = "0ryzchkk37yzihfhra5xh5sj2k46bdlspi9i2zfs63q3n32jyfww";
+      name = "k3b-17.12.2.tar.xz";
     };
   };
   kaccounts-integration = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kaccounts-integration-17.12.1.tar.xz";
-      sha256 = "1zfq6yknn8kjjnkp3s58gj15r5qd0xpmxl49c2615j08qjbbs5k2";
-      name = "kaccounts-integration-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kaccounts-integration-17.12.2.tar.xz";
+      sha256 = "14mipln6ppg88yipwvyc6ainj250ss6xynh9smxbji533wyg72c5";
+      name = "kaccounts-integration-17.12.2.tar.xz";
     };
   };
   kaccounts-providers = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kaccounts-providers-17.12.1.tar.xz";
-      sha256 = "1mzh7brgd42fb4nnnn607nivqpb3hvy982dini32j54k1rls4810";
-      name = "kaccounts-providers-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kaccounts-providers-17.12.2.tar.xz";
+      sha256 = "1lapgxlgzymrdl8swn2prrlrmz5xgmkhmv7hx8fpxpc3cpfyvfsd";
+      name = "kaccounts-providers-17.12.2.tar.xz";
     };
   };
   kaddressbook = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kaddressbook-17.12.1.tar.xz";
-      sha256 = "1ls02igrp4q6zbw62gyp3rkzbyv6jm0s46z1q3ifkqyxanm3mpbv";
-      name = "kaddressbook-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kaddressbook-17.12.2.tar.xz";
+      sha256 = "1b5a5ypmf0jr9si5cx01h52aql26v6cv16wzrrb6vhxqzksmwriw";
+      name = "kaddressbook-17.12.2.tar.xz";
     };
   };
   kajongg = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kajongg-17.12.1.tar.xz";
-      sha256 = "05vakzhzrr7p8hdrmmvy8q0mj0z5xf7zyzm4lckaj9mpfvg9gnxm";
-      name = "kajongg-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kajongg-17.12.2.tar.xz";
+      sha256 = "15vnin2rg63c60injxqkx0jp5sy1hjmh5rys3qq40wy0bm41pwai";
+      name = "kajongg-17.12.2.tar.xz";
     };
   };
   kalarm = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kalarm-17.12.1.tar.xz";
-      sha256 = "11aa89k44jzmkm3xrgi59y4fgk2vb68zhhrkm53r13wxv2k2z9d7";
-      name = "kalarm-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kalarm-17.12.2.tar.xz";
+      sha256 = "1vvayib91mh73kqc0linzqlwa1l9jlc2wsih80bzzglaaxbi4l7z";
+      name = "kalarm-17.12.2.tar.xz";
     };
   };
   kalarmcal = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kalarmcal-17.12.1.tar.xz";
-      sha256 = "05ynq5rbcny5h0k43r13b019zkg8mfkpkfx6drnar7nif6ji3qg5";
-      name = "kalarmcal-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kalarmcal-17.12.2.tar.xz";
+      sha256 = "04js601j477jwa5lhqdxq9gaacd7bf5ladgy3k64dwns5mx1j762";
+      name = "kalarmcal-17.12.2.tar.xz";
     };
   };
   kalgebra = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kalgebra-17.12.1.tar.xz";
-      sha256 = "10pn3b17ahxp99glza6yyj4fmn6f6mhjggfd1d612gj8jldqr7r4";
-      name = "kalgebra-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kalgebra-17.12.2.tar.xz";
+      sha256 = "10vfzwmz0l7yvmy8gjwcb3dnpqyfngj47knb5knvkibqzij6p4w4";
+      name = "kalgebra-17.12.2.tar.xz";
     };
   };
   kalzium = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kalzium-17.12.1.tar.xz";
-      sha256 = "13h4134w97dbsxrg4f6bgq5l14shlzg4djzwyiad4m892hmyrajn";
-      name = "kalzium-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kalzium-17.12.2.tar.xz";
+      sha256 = "0rdq2cpq5mzl3qrj3ll1d0qixaiygl5x277wlr5fg9cngi51v58x";
+      name = "kalzium-17.12.2.tar.xz";
     };
   };
   kamera = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kamera-17.12.1.tar.xz";
-      sha256 = "19ps2p6cwhgfw9ll8gjjdq7k88srcixsfmfsqk8jvi9jpfqcw9mn";
-      name = "kamera-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kamera-17.12.2.tar.xz";
+      sha256 = "070kvaij5chk8nkap9nm1rrilq3sc32q7ysnrld9bssbfi9m73v7";
+      name = "kamera-17.12.2.tar.xz";
     };
   };
   kanagram = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kanagram-17.12.1.tar.xz";
-      sha256 = "0pq0iwd7qrd5rc5jgm3ll2hgdxrjb6rq1qzz1175lj4b9ackn7ad";
-      name = "kanagram-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kanagram-17.12.2.tar.xz";
+      sha256 = "1300wg5k6x6s1wgmavywcwyqgv68xv0qv6hkqawvzsd61zfhxcr3";
+      name = "kanagram-17.12.2.tar.xz";
     };
   };
   kapman = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kapman-17.12.1.tar.xz";
-      sha256 = "1d0a36jj1prp6zsxhzxz081w6wr5p7hb6lx687nfrqhbiqkr9059";
-      name = "kapman-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kapman-17.12.2.tar.xz";
+      sha256 = "0njf1017dnf4xl801xinfgfmqqpjf3ifnpwchg35zm2qlrlwhmyi";
+      name = "kapman-17.12.2.tar.xz";
     };
   };
   kapptemplate = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kapptemplate-17.12.1.tar.xz";
-      sha256 = "1gcb8gc4x6f1brxqxdsppq61n8r20p9a0qq0pp8g88q1n5r3irpc";
-      name = "kapptemplate-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kapptemplate-17.12.2.tar.xz";
+      sha256 = "16p63zil3vaa5q2q01010gshn6a58kbmayks27kdgvsfdavgdh51";
+      name = "kapptemplate-17.12.2.tar.xz";
     };
   };
   kate = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kate-17.12.1.tar.xz";
-      sha256 = "0rnkp197ranq3hi9scw1k1nmqj05fhnifyk9gjbg4mp8wwn3zgcv";
-      name = "kate-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kate-17.12.2.tar.xz";
+      sha256 = "1w3pswd3gpjpa55xy98yq39nck775mfv5i9lcvm8y15x1233rr6p";
+      name = "kate-17.12.2.tar.xz";
     };
   };
   katomic = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/katomic-17.12.1.tar.xz";
-      sha256 = "13xszrnc3bgz2vbzhhz00k1hzlzi7n7jvg61rjqg0frf0n4ccih0";
-      name = "katomic-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/katomic-17.12.2.tar.xz";
+      sha256 = "0jhmszbq0rslwg8b8aq0vjynjlkg491di661k2b6yrsfqr4vmngw";
+      name = "katomic-17.12.2.tar.xz";
     };
   };
   kblackbox = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kblackbox-17.12.1.tar.xz";
-      sha256 = "1iish6qs2q7pn9y8k4v07gkyqs0jq6ppdvxc6jfrkzymcnnaq9by";
-      name = "kblackbox-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kblackbox-17.12.2.tar.xz";
+      sha256 = "07bvmcfm3r4dj41dvsaba4rig2i9yilshrzl3wwprsjajmx4j6rf";
+      name = "kblackbox-17.12.2.tar.xz";
     };
   };
   kblocks = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kblocks-17.12.1.tar.xz";
-      sha256 = "11kfm99hp6a4dp5q6bapq3axgkjmwcp1cd284plm3nxsd15sv87b";
-      name = "kblocks-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kblocks-17.12.2.tar.xz";
+      sha256 = "019h8rxv9p1ynby7bshr2yzrcn415magwlzmyrwvh5hzjjp0bmm9";
+      name = "kblocks-17.12.2.tar.xz";
     };
   };
   kblog = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kblog-17.12.1.tar.xz";
-      sha256 = "1f7ygzb3acgjr1ax768cv94l3li8lbq6230lkgqz6lms3x9plpdc";
-      name = "kblog-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kblog-17.12.2.tar.xz";
+      sha256 = "1s2py5ll879zxcl6l7y2jryy1z29wljwm8hrgr52f8xr22vspbjc";
+      name = "kblog-17.12.2.tar.xz";
     };
   };
   kbounce = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kbounce-17.12.1.tar.xz";
-      sha256 = "18w0jxdfjkvrkz1g1k0f37ajjyxc7cazbp3qxg0m2pbrkllgs12v";
-      name = "kbounce-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kbounce-17.12.2.tar.xz";
+      sha256 = "0rb9p8q0zwwfx70cxfcdbr9h3i8gag0da8nql6nnd37v2wcr4i82";
+      name = "kbounce-17.12.2.tar.xz";
     };
   };
   kbreakout = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kbreakout-17.12.1.tar.xz";
-      sha256 = "166ck3z0x77p6n065q41fwj3lvxyzsshpgmi7xavbjgjl6cb941r";
-      name = "kbreakout-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kbreakout-17.12.2.tar.xz";
+      sha256 = "1j9gfzgdjhfd4jz2x3qgbd4jwfix0m1qx5lnlbkbxnff5jkw68sh";
+      name = "kbreakout-17.12.2.tar.xz";
     };
   };
   kbruch = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kbruch-17.12.1.tar.xz";
-      sha256 = "04ylr7jj1qz3clnavv195gqm4hi017jzrz3vbx0dg7jfqr9jvzxh";
-      name = "kbruch-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kbruch-17.12.2.tar.xz";
+      sha256 = "0q95i474lgbl6phshbw7f89kik8hk9k8j8vpbzy3cchwn7dmg3p3";
+      name = "kbruch-17.12.2.tar.xz";
     };
   };
   kcachegrind = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kcachegrind-17.12.1.tar.xz";
-      sha256 = "1qiwv7xpcf01s08bm83n77nhwplg19dd0zaqcr6xagjhf9y165xf";
-      name = "kcachegrind-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kcachegrind-17.12.2.tar.xz";
+      sha256 = "02nx8vqvl62vdm311r4akcckzl1w4c47phl3ybswygrakik7vf2a";
+      name = "kcachegrind-17.12.2.tar.xz";
     };
   };
   kcalc = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kcalc-17.12.1.tar.xz";
-      sha256 = "00asfczvfvfmfg0ffd0d2rh3nmqgzqf4f9bdkwq9z8gajfz3cjs1";
-      name = "kcalc-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kcalc-17.12.2.tar.xz";
+      sha256 = "13h4c97qz8g7z4r5kb4js6sjzdgr3s4mabzr16qkwmmg4lwvzcp8";
+      name = "kcalc-17.12.2.tar.xz";
     };
   };
   kcalcore = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kcalcore-17.12.1.tar.xz";
-      sha256 = "0zyf3r3zwivjzqag76pi9wrbvzqzbcnraajbb0xksf9ik53gk3pd";
-      name = "kcalcore-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kcalcore-17.12.2.tar.xz";
+      sha256 = "06z7xd0a8pz75zx1l2hcban39rc6dmxhhwhgidfglkj3l2xzw927";
+      name = "kcalcore-17.12.2.tar.xz";
     };
   };
   kcalutils = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kcalutils-17.12.1.tar.xz";
-      sha256 = "01djf24immjn62hxs2gsi5f27q54vh254wq3sqzgxz0vbfv97bza";
-      name = "kcalutils-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kcalutils-17.12.2.tar.xz";
+      sha256 = "11vp32f53by2gc7zv08zq0z591rw4srmmjmiafds8hvx76ry3dsl";
+      name = "kcalutils-17.12.2.tar.xz";
     };
   };
   kcharselect = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kcharselect-17.12.1.tar.xz";
-      sha256 = "14bh4n4bqi5y7ya6xi7ykl398i2qdkmximp87r5qcimxgvxfczki";
-      name = "kcharselect-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kcharselect-17.12.2.tar.xz";
+      sha256 = "1gbr6gvp2vwgvns83pmg5idhwhixyw9yqyr6nn61qf43f97nkdiy";
+      name = "kcharselect-17.12.2.tar.xz";
     };
   };
   kcolorchooser = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kcolorchooser-17.12.1.tar.xz";
-      sha256 = "1aqzwbw7ajb5nzj2k107m32naj0c6nsdhzmg0w0wrd80fz2qnpx3";
-      name = "kcolorchooser-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kcolorchooser-17.12.2.tar.xz";
+      sha256 = "0jjzpm82jy9f4qf5sf5v24vk50y4qq2sj42zn057v0kwlpwzvrr9";
+      name = "kcolorchooser-17.12.2.tar.xz";
     };
   };
   kcontacts = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kcontacts-17.12.1.tar.xz";
-      sha256 = "152a9bhyya4rigmydfh6x932pp3vi4i1zya5sdlg9vr045ljgzwk";
-      name = "kcontacts-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kcontacts-17.12.2.tar.xz";
+      sha256 = "0hg442jg0rb7fsy67fg44551c02gx3i7znwl6cgr9nzlxj5srhyq";
+      name = "kcontacts-17.12.2.tar.xz";
     };
   };
   kcron = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kcron-17.12.1.tar.xz";
-      sha256 = "0qzc8427l1hndisq163b4ppph8ividw38lxczirv186gm01xsgqk";
-      name = "kcron-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kcron-17.12.2.tar.xz";
+      sha256 = "1h1bkicvfbz7s0n36iw5pilqrv2vfzl3rwqx6r0wa10341sx8wc3";
+      name = "kcron-17.12.2.tar.xz";
     };
   };
   kdav = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdav-17.12.1.tar.xz";
-      sha256 = "09q1d0yzhwr4gr4xfp1zbmqbdhrw827y379blqg1351k8mxvfhzi";
-      name = "kdav-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdav-17.12.2.tar.xz";
+      sha256 = "1jlw2l6jd2rhf7swl7bwlsphp1xddb0f9xzkpa6dxw4cimfz4r7l";
+      name = "kdav-17.12.2.tar.xz";
     };
   };
   kdebugsettings = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdebugsettings-17.12.1.tar.xz";
-      sha256 = "0ac8mnjm7mvk9988ds0kvgxnjfkpv8iiwgaccsykiqgpnk8dx7qh";
-      name = "kdebugsettings-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdebugsettings-17.12.2.tar.xz";
+      sha256 = "1a9yy42x16maj60wh7x19248gp1x4diybj9k2gkmlf7hd8g82m4b";
+      name = "kdebugsettings-17.12.2.tar.xz";
     };
   };
   kde-dev-scripts = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kde-dev-scripts-17.12.1.tar.xz";
-      sha256 = "1cxfjc4can7ggbrcdz03lsalq221fw5qmcw9y35kqs504wgc0g1w";
-      name = "kde-dev-scripts-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kde-dev-scripts-17.12.2.tar.xz";
+      sha256 = "181s9cf1kqx35w9cza40svgzbqvhz48f858r0rxvl6klzm7rrqmn";
+      name = "kde-dev-scripts-17.12.2.tar.xz";
     };
   };
   kde-dev-utils = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kde-dev-utils-17.12.1.tar.xz";
-      sha256 = "0mnk6zzq0xa3fd32c46gyjsqsxji5p7ky5g7bly2myhl7f03hnc0";
-      name = "kde-dev-utils-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kde-dev-utils-17.12.2.tar.xz";
+      sha256 = "044w9az0jnc7lhlgyiqxsl5lgfzbnrfrdvsr2918idy2niif7cjq";
+      name = "kde-dev-utils-17.12.2.tar.xz";
     };
   };
   kdeedu-data = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdeedu-data-17.12.1.tar.xz";
-      sha256 = "0i917gys8bpsmswm7rp2idbrwv5470cvp4xa0wxfnnq0y6nxj0w3";
-      name = "kdeedu-data-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdeedu-data-17.12.2.tar.xz";
+      sha256 = "1sdldx357ifv4sqwa8yrcjxyricb0kk21gvj9472bi28rcgyxqgv";
+      name = "kdeedu-data-17.12.2.tar.xz";
     };
   };
   kdegraphics-mobipocket = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdegraphics-mobipocket-17.12.1.tar.xz";
-      sha256 = "09bh0qjzr27zkvz5cyrxpx5pkz9fldr2yxzc1f3hxs2fmqgj7rc6";
-      name = "kdegraphics-mobipocket-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdegraphics-mobipocket-17.12.2.tar.xz";
+      sha256 = "1jx5ir1q12s939m0nndhxwiarfr6r7ma79dy9fn5bbhdjgjqf7fq";
+      name = "kdegraphics-mobipocket-17.12.2.tar.xz";
     };
   };
   kdegraphics-thumbnailers = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdegraphics-thumbnailers-17.12.1.tar.xz";
-      sha256 = "0fm8vsbmaxibjlkjkbic7b8x3xrz8nrjn8r8ps4mka4hnsmkk2b9";
-      name = "kdegraphics-thumbnailers-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdegraphics-thumbnailers-17.12.2.tar.xz";
+      sha256 = "0d6cf2mhblxgnhv432x9rgk5k73fhpa20xajn6nfawxkmpkzngsy";
+      name = "kdegraphics-thumbnailers-17.12.2.tar.xz";
     };
   };
   kdenetwork-filesharing = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdenetwork-filesharing-17.12.1.tar.xz";
-      sha256 = "10d0ayd3krkac0249smnxn8jfyj9rfy1jjx0d2sqs28jhq5z8892";
-      name = "kdenetwork-filesharing-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdenetwork-filesharing-17.12.2.tar.xz";
+      sha256 = "1ghdskmc0ynjb1a4qid9vjjcl8nmyqvr5x6aryzz9g1rmm6vv8l5";
+      name = "kdenetwork-filesharing-17.12.2.tar.xz";
     };
   };
   kdenlive = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdenlive-17.12.1.tar.xz";
-      sha256 = "0rv52w6kccsz6796nhn5hw0x5x2jjwx7y8jxmglc7jbdlsf90bj1";
-      name = "kdenlive-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdenlive-17.12.2.tar.xz";
+      sha256 = "1l2sv78wwfwrya486sm4iszkm1hsj473a5gpkgay66h4qb968w70";
+      name = "kdenlive-17.12.2.tar.xz";
     };
   };
   kdepim-addons = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdepim-addons-17.12.1.tar.xz";
-      sha256 = "19sn4j4ks5iqmcgnir1p2hgzvgncy2iqdvwq7p4ns7hy35bl59n3";
-      name = "kdepim-addons-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdepim-addons-17.12.2.tar.xz";
+      sha256 = "185qargpzlmphq5afzvw0pcmas8ska2cnnbv5rpicmg8q01ixnm7";
+      name = "kdepim-addons-17.12.2.tar.xz";
     };
   };
   kdepim-apps-libs = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdepim-apps-libs-17.12.1.tar.xz";
-      sha256 = "1xy7wcz4wk9qcgmss3xfbkhyhvfp31c13n1wj7a4ar724s35sja9";
-      name = "kdepim-apps-libs-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdepim-apps-libs-17.12.2.tar.xz";
+      sha256 = "0zn620bv551lgl6sx9g4f8ncpv5hs231jbrzkiwqw6y74xw5qq7g";
+      name = "kdepim-apps-libs-17.12.2.tar.xz";
     };
   };
   kdepim-runtime = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdepim-runtime-17.12.1.tar.xz";
-      sha256 = "0k2b52smz68b9ijcdawimnh471zzadqnfxhvkvprkah952p23z32";
-      name = "kdepim-runtime-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdepim-runtime-17.12.2.tar.xz";
+      sha256 = "1z11ac0l4n80nybsnfk716c88ah2l7g1fsz5xmzvv6pcmhm2q94j";
+      name = "kdepim-runtime-17.12.2.tar.xz";
     };
   };
   kdesdk-kioslaves = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdesdk-kioslaves-17.12.1.tar.xz";
-      sha256 = "07zv4xkgqpirc0jzidbv0nc5bgqn5sywz9lvgs2v73v1pz1gy13m";
-      name = "kdesdk-kioslaves-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdesdk-kioslaves-17.12.2.tar.xz";
+      sha256 = "09r7iqqvil2sjfzdnq64075gmm7wxd705j00qxfch99ja3nf4961";
+      name = "kdesdk-kioslaves-17.12.2.tar.xz";
     };
   };
   kdesdk-thumbnailers = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdesdk-thumbnailers-17.12.1.tar.xz";
-      sha256 = "0r2dpin3cf19qii0sfl4s8pj99n0fsxgc1l1lh3bnm94z7myld2c";
-      name = "kdesdk-thumbnailers-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdesdk-thumbnailers-17.12.2.tar.xz";
+      sha256 = "1j8gqwcs65cfpaqvny29yqzsgjbjmxrafnf4ggc1bjaz2p63blni";
+      name = "kdesdk-thumbnailers-17.12.2.tar.xz";
     };
   };
   kdf = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdf-17.12.1.tar.xz";
-      sha256 = "0jk9i94mc0jb08z4vnnr3m6mlih6y877hll42p0iywliwsbnyz21";
-      name = "kdf-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdf-17.12.2.tar.xz";
+      sha256 = "07379lagrl7hhh05dixd4ldqiy9pwmw0yai8sgcbfi3kgcns9c6a";
+      name = "kdf-17.12.2.tar.xz";
     };
   };
   kdialog = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdialog-17.12.1.tar.xz";
-      sha256 = "075xhg3bzyxaanixlzr740km2z84csx4jbq37gijdz6rllnxjxwl";
-      name = "kdialog-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdialog-17.12.2.tar.xz";
+      sha256 = "1pwicn5jsg3jwqqkrjhaxbcd9762k9fj4w51ahglby04c4cca38a";
+      name = "kdialog-17.12.2.tar.xz";
     };
   };
   kdiamond = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kdiamond-17.12.1.tar.xz";
-      sha256 = "08qw7gry0zdrslq5dpzm45blcr951xnrgfs75jpw3f7g9xy042kx";
-      name = "kdiamond-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kdiamond-17.12.2.tar.xz";
+      sha256 = "03m91x6rgh3wd8mim41d08x1c06ndg9vkciyl6nkj4iyflwwy0rp";
+      name = "kdiamond-17.12.2.tar.xz";
     };
   };
   keditbookmarks = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/keditbookmarks-17.12.1.tar.xz";
-      sha256 = "1ml3bl6f24c6cs4hfa87rvyax36wcjxkh94iy5xwlhfd176qcjnn";
-      name = "keditbookmarks-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/keditbookmarks-17.12.2.tar.xz";
+      sha256 = "1aqqd2lvdbqhnzz28axv9j84s7i7cxrs39zyaia7cwzbbgymkal1";
+      name = "keditbookmarks-17.12.2.tar.xz";
     };
   };
   kfind = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kfind-17.12.1.tar.xz";
-      sha256 = "0z97w4p86ylkndq12dphpfa0r10ld2b5fvcj1xdfa9cic14lgfxk";
-      name = "kfind-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kfind-17.12.2.tar.xz";
+      sha256 = "0zxm5fjf6xzl871gjbs5nzp6h5j4qm47ygfq644jqbi9f3z2in74";
+      name = "kfind-17.12.2.tar.xz";
     };
   };
   kfloppy = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kfloppy-17.12.1.tar.xz";
-      sha256 = "11gc0v1nkwg6f334ydsh289s5bgxr7ccdybbw3zq16q0vih9px3a";
-      name = "kfloppy-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kfloppy-17.12.2.tar.xz";
+      sha256 = "0s25jbngh6zipxm16kffvwyd1ircnf0xjsh20lm08i9kh4jcicgq";
+      name = "kfloppy-17.12.2.tar.xz";
     };
   };
   kfourinline = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kfourinline-17.12.1.tar.xz";
-      sha256 = "0rb6z0siw8yhf4w3m9hrkv6csm4vdr8qj7754c41fqkrnlfa8w96";
-      name = "kfourinline-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kfourinline-17.12.2.tar.xz";
+      sha256 = "0cqlqab9sazhvvsdyvwzdzrjccvlbxwq2p1n6ki8g8i6707mx3hc";
+      name = "kfourinline-17.12.2.tar.xz";
     };
   };
   kgeography = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kgeography-17.12.1.tar.xz";
-      sha256 = "1v6xyqv8d4faj0ix7jwq8ralr8s8vi8ryn6hy1i4lj3a06mvgk5z";
-      name = "kgeography-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kgeography-17.12.2.tar.xz";
+      sha256 = "1mf5zr4cwnnrvsad4mq0mr6p3v38payajagc2whfl1lmcg82f2wl";
+      name = "kgeography-17.12.2.tar.xz";
     };
   };
   kget = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kget-17.12.1.tar.xz";
-      sha256 = "1n6z92fcbvnvzk3wwpfrf8ycx3kv8vnybpay6hmr63vnbgn7bssw";
-      name = "kget-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kget-17.12.2.tar.xz";
+      sha256 = "1fm5yzxxg7lihzgnl7207gfn9gz33ydk1axf8lmdhwwld14q25f9";
+      name = "kget-17.12.2.tar.xz";
     };
   };
   kgoldrunner = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kgoldrunner-17.12.1.tar.xz";
-      sha256 = "01c2439a7vic3nxhnzhjph3qnfp6qm7yv6qcanxaf2jy7idbm5zq";
-      name = "kgoldrunner-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kgoldrunner-17.12.2.tar.xz";
+      sha256 = "0dddzimh41xm6fvz1spl58gwff9vlx12h52kbfxdb2wz60zkg8wb";
+      name = "kgoldrunner-17.12.2.tar.xz";
     };
   };
   kgpg = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kgpg-17.12.1.tar.xz";
-      sha256 = "1h82gx0y7vm3n7idhqdawns47fmjv6szz3qivds4jj0wx9z2gc9f";
-      name = "kgpg-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kgpg-17.12.2.tar.xz";
+      sha256 = "0r604acqm255xqjqg4islk30g62f8p9mj6haqp0iyw82239hbkp0";
+      name = "kgpg-17.12.2.tar.xz";
     };
   };
   khangman = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/khangman-17.12.1.tar.xz";
-      sha256 = "1a5ifxm2flkbxy1lqvkaz48ff57yvhqm49j3l637q60i7v2gd75q";
-      name = "khangman-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/khangman-17.12.2.tar.xz";
+      sha256 = "1wk0k4lbskgxrbv91032yg6n64ghir25128pphsy61m4v00jysg3";
+      name = "khangman-17.12.2.tar.xz";
     };
   };
   khelpcenter = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/khelpcenter-17.12.1.tar.xz";
-      sha256 = "0y7axdqfmbd2sas5c6ncsi6bpbh95mgymsbpvp2gv7r7d3p11irj";
-      name = "khelpcenter-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/khelpcenter-17.12.2.tar.xz";
+      sha256 = "0871xxril7dllks46f4a31dkiwmgjc8ajm2jpn5hfm3g2cbawlsd";
+      name = "khelpcenter-17.12.2.tar.xz";
     };
   };
   kholidays = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kholidays-17.12.1.tar.xz";
-      sha256 = "0595d7wbnz8kyq1bnivdrp20lwdp8ykvdll1fmb0fgm4q24z0cl8";
-      name = "kholidays-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kholidays-17.12.2.tar.xz";
+      sha256 = "0mn2bmjiy5k99g4yv0n61jklyp1105kmnvkf4ay28ha55zy95bbk";
+      name = "kholidays-17.12.2.tar.xz";
     };
   };
   kidentitymanagement = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kidentitymanagement-17.12.1.tar.xz";
-      sha256 = "1hz1zawc3zmbj0ylhxc4p1qgffpjbpvzhj5mi4b5zvi0nblqsnk6";
-      name = "kidentitymanagement-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kidentitymanagement-17.12.2.tar.xz";
+      sha256 = "1s5xjgbp7vdww8k59s8h2mypi1d94n4kkphkgiybdq2gxpfq73pb";
+      name = "kidentitymanagement-17.12.2.tar.xz";
     };
   };
   kig = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kig-17.12.1.tar.xz";
-      sha256 = "0nvsz4q51bjr380w8gfzfahigpxyap7bf54lnllhfbad673b897d";
-      name = "kig-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kig-17.12.2.tar.xz";
+      sha256 = "1cphrji1l3c32j8wdr88y40fzkr9s20q79hlk4c4rhzkym7jgzhp";
+      name = "kig-17.12.2.tar.xz";
     };
   };
   kigo = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kigo-17.12.1.tar.xz";
-      sha256 = "01f0l6fs12v5m88hc9g788mq4k61irgdnf47h7hln4k62rn7yfp9";
-      name = "kigo-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kigo-17.12.2.tar.xz";
+      sha256 = "0xz8nmhgx8iadwmqkm6469vw8vn9n74mk2fhmciqn8xn66r11g9d";
+      name = "kigo-17.12.2.tar.xz";
     };
   };
   killbots = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/killbots-17.12.1.tar.xz";
-      sha256 = "16x72i36vy8a2r7bsg5qmg7bs91cxk3r1yhk8ch8666jl8jvxlnx";
-      name = "killbots-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/killbots-17.12.2.tar.xz";
+      sha256 = "140v8mwbkhv9fkqi0781mrk51fk00q5p1ad3p1rqgmhy0pzfvkg4";
+      name = "killbots-17.12.2.tar.xz";
     };
   };
   kimagemapeditor = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kimagemapeditor-17.12.1.tar.xz";
-      sha256 = "0zhrfr17596swxp7g53y74kh3pndgpjk8lrxfhpvxn45628wzb62";
-      name = "kimagemapeditor-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kimagemapeditor-17.12.2.tar.xz";
+      sha256 = "16wyb80al1vp3macr2lrkh0f1l42jzm126mv2l5gbhd5qiwj6yag";
+      name = "kimagemapeditor-17.12.2.tar.xz";
     };
   };
   kimap = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kimap-17.12.1.tar.xz";
-      sha256 = "1isga4zz98qcgfhvvjmkm0fv8fm27japzc69il814bypd49bkvmb";
-      name = "kimap-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kimap-17.12.2.tar.xz";
+      sha256 = "15nbnjckmqa4kka012lvaziimgnr6vs5k361sjhdykvrvk4fhz13";
+      name = "kimap-17.12.2.tar.xz";
     };
   };
   kio-extras = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kio-extras-17.12.1.tar.xz";
-      sha256 = "0vqzvd9linv6y6pfqdi9az79d9294wadz96pr03zwhbak0z5bw65";
-      name = "kio-extras-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kio-extras-17.12.2.tar.xz";
+      sha256 = "0vc8wwx9cqs48hn1hf49fmz99xa4c8vhcqq58wmpq3bg62vfipyp";
+      name = "kio-extras-17.12.2.tar.xz";
     };
   };
   kiriki = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kiriki-17.12.1.tar.xz";
-      sha256 = "08xhsdxz0w0qw155zasyq49r1hfqqrbk916lxilmqgkxqww53wgw";
-      name = "kiriki-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kiriki-17.12.2.tar.xz";
+      sha256 = "1a427gja7y2s37a29jl1n4bx1xa2piqm7wwv7g7agaxm5j15qvx8";
+      name = "kiriki-17.12.2.tar.xz";
     };
   };
   kiten = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kiten-17.12.1.tar.xz";
-      sha256 = "1mrlj80m1g7r9wwmyrz7iq0lz5lmx56h8fzwcg4nkpim571cn6ch";
-      name = "kiten-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kiten-17.12.2.tar.xz";
+      sha256 = "0bcb65pcs3xv5pmr78zlxcbicxknvbf30h83i4f4qjxrq6iw8sf4";
+      name = "kiten-17.12.2.tar.xz";
     };
   };
   kjumpingcube = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kjumpingcube-17.12.1.tar.xz";
-      sha256 = "04bzxq4r7jr776g7hyf2wm08y7j9y5wy0c2war7mn2nc8an2rnna";
-      name = "kjumpingcube-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kjumpingcube-17.12.2.tar.xz";
+      sha256 = "0d2gdvjd0fxxdnpxfplw9gp69b1qx35w165srd79qcx17c2r7cdv";
+      name = "kjumpingcube-17.12.2.tar.xz";
     };
   };
   kldap = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kldap-17.12.1.tar.xz";
-      sha256 = "0gn84blvrfspvw4gaqisrsdxp2051j5xva00cw3lv9n0vyrq8vqf";
-      name = "kldap-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kldap-17.12.2.tar.xz";
+      sha256 = "177xg8ng4636gnppf4jf0m2amadlrz0n9bdmc7f6xnijchmda2p4";
+      name = "kldap-17.12.2.tar.xz";
     };
   };
   kleopatra = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kleopatra-17.12.1.tar.xz";
-      sha256 = "1rzil9m982iilwpz8qi6j8brrwvzcdrmzldrwaqdpa1v56sjq5f0";
-      name = "kleopatra-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kleopatra-17.12.2.tar.xz";
+      sha256 = "04c1w1la826dwjam19m12jg8l5c8641l7ad6injrbig1kja819v4";
+      name = "kleopatra-17.12.2.tar.xz";
     };
   };
   klettres = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/klettres-17.12.1.tar.xz";
-      sha256 = "1ibrkwy9bb60cilmnv46zhw0zl4lv8sn9wddjg53havh38rwjgwc";
-      name = "klettres-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/klettres-17.12.2.tar.xz";
+      sha256 = "16pi5r4s67j6pq5jjbyap7jrxxx5wrg7dr77391yk06s955rcfr1";
+      name = "klettres-17.12.2.tar.xz";
     };
   };
   klickety = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/klickety-17.12.1.tar.xz";
-      sha256 = "09d8mkca0p5fp93i5w30zbvz746j7cvz11wrscjbg2n6vi36pcbd";
-      name = "klickety-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/klickety-17.12.2.tar.xz";
+      sha256 = "0rwmswrmwjizv9vw3bivh75wisy09icbykvwsi43zsapar9hs89l";
+      name = "klickety-17.12.2.tar.xz";
     };
   };
   klines = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/klines-17.12.1.tar.xz";
-      sha256 = "0b9srbianz3c5knbm9cwn9f5i88pg5v5gc1fnz1vgir2izlyx5pg";
-      name = "klines-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/klines-17.12.2.tar.xz";
+      sha256 = "0nl5w65m7c46hjh0hvd76x7zf5c9qlqxqn8b96dzgrab6s9f96wf";
+      name = "klines-17.12.2.tar.xz";
     };
   };
   kmag = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kmag-17.12.1.tar.xz";
-      sha256 = "04z02kyaf5xfb8j4fxq1i5b08hvl2j9dbik2liiykzdhv5kn8di8";
-      name = "kmag-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kmag-17.12.2.tar.xz";
+      sha256 = "0yxh4y5l6l528j2nz4wl0w8zmydayrgh1aracy1lymv65ww8qax2";
+      name = "kmag-17.12.2.tar.xz";
     };
   };
   kmahjongg = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kmahjongg-17.12.1.tar.xz";
-      sha256 = "1d46d8dpx969sih2dlc6qf3kiqj9ry7w8jgqczsjnm1irh6l7gqd";
-      name = "kmahjongg-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kmahjongg-17.12.2.tar.xz";
+      sha256 = "06skr41bs29q19dm6j79h0x1l2szbr6gz9kn6s47s23wmyjkqdqr";
+      name = "kmahjongg-17.12.2.tar.xz";
     };
   };
   kmail = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kmail-17.12.1.tar.xz";
-      sha256 = "0dfzgf0mpjanq43fwlv4165ggxi1iqv8dfxpgdf8vg1l8ckb86p0";
-      name = "kmail-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kmail-17.12.2.tar.xz";
+      sha256 = "0kanmbb09x6cyswq7ws6cw7j117lqwqp3hvs9hipx7nyr38mhrlc";
+      name = "kmail-17.12.2.tar.xz";
     };
   };
   kmail-account-wizard = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kmail-account-wizard-17.12.1.tar.xz";
-      sha256 = "0swilpfry4fqkjpd4hwqxycxy2655znphppp67h5fjrnjbvpkyfv";
-      name = "kmail-account-wizard-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kmail-account-wizard-17.12.2.tar.xz";
+      sha256 = "1l7szmbhxrqj93cqvpaywgyql319n1wmw8acnca1aym9l79pns0s";
+      name = "kmail-account-wizard-17.12.2.tar.xz";
     };
   };
   kmailtransport = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kmailtransport-17.12.1.tar.xz";
-      sha256 = "1yxxj93lxfb068z5f5dhz85jy3f0a76zifvxgh8ph05n2kr23rq3";
-      name = "kmailtransport-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kmailtransport-17.12.2.tar.xz";
+      sha256 = "1prrw61vz52wp8yb587xz1kd5rm6s6dry8i9zcs66aha5g7r0wj8";
+      name = "kmailtransport-17.12.2.tar.xz";
     };
   };
   kmbox = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kmbox-17.12.1.tar.xz";
-      sha256 = "12ds7kzrjb885ip73drd9q40gb59d8yhr3y8pdkmz048z7495dh9";
-      name = "kmbox-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kmbox-17.12.2.tar.xz";
+      sha256 = "0q6217br3cpdwns6hiw5klnvkwwx7sd8gbl003clf4wkfnxpgqsb";
+      name = "kmbox-17.12.2.tar.xz";
     };
   };
   kmime = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kmime-17.12.1.tar.xz";
-      sha256 = "1659ri4fxmfnkfa6nqbhkvpj349ynhcl254hwp43pngf1zmk280x";
-      name = "kmime-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kmime-17.12.2.tar.xz";
+      sha256 = "097xzsd7lld01iz1nziy8b9vv97xaz6vsl52d5809h0kxfpixw99";
+      name = "kmime-17.12.2.tar.xz";
     };
   };
   kmines = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kmines-17.12.1.tar.xz";
-      sha256 = "0dhwda6gkjix0lmb3wcz6ds8fglzw7i8wg85a2ij6amc6am9014j";
-      name = "kmines-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kmines-17.12.2.tar.xz";
+      sha256 = "00apcafaxh18rxk8d3r333mzjd0b6f7946kp6ffr1ps9c93mm3ab";
+      name = "kmines-17.12.2.tar.xz";
     };
   };
   kmix = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kmix-17.12.1.tar.xz";
-      sha256 = "1xf46qjn6ax5w8z7l78wcw4k4j59c40vncmrpqdb62kmr4zi0m7q";
-      name = "kmix-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kmix-17.12.2.tar.xz";
+      sha256 = "096dbmywdhgcjzvm473sm0vjrmgfmb19cjx82066ws8pvn9fybdj";
+      name = "kmix-17.12.2.tar.xz";
     };
   };
   kmousetool = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kmousetool-17.12.1.tar.xz";
-      sha256 = "1qbxq4b892i4ssjbky0i5jk96q8zs4lr859y3190kz538g5jakh0";
-      name = "kmousetool-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kmousetool-17.12.2.tar.xz";
+      sha256 = "08kv4j6r18wrl7n4j7apffyj52w77l8rkksvmdzlfg2nk87vaafj";
+      name = "kmousetool-17.12.2.tar.xz";
     };
   };
   kmouth = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kmouth-17.12.1.tar.xz";
-      sha256 = "1yn510zhcw9kw0qcy21k85ryhki56lvgzgzq2hjqbjq0ymzpmlmp";
-      name = "kmouth-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kmouth-17.12.2.tar.xz";
+      sha256 = "12kdrwz3mxwz9y4srq5jjrrn0wg3905qhg1qbj8p583gk1n03g20";
+      name = "kmouth-17.12.2.tar.xz";
     };
   };
   kmplot = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kmplot-17.12.1.tar.xz";
-      sha256 = "06ybsjl9m9awjb70inm7i2hg92p34gqmb4vc5sn8jm2ckm5qsgc6";
-      name = "kmplot-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kmplot-17.12.2.tar.xz";
+      sha256 = "1pws8lajpjm4nfichd0949lmsn975ivxh2b001gsif3vvadmp48l";
+      name = "kmplot-17.12.2.tar.xz";
     };
   };
   knavalbattle = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/knavalbattle-17.12.1.tar.xz";
-      sha256 = "1yzf70lnjvyk63bv88ycjcwxnbwp0wh2lifqq7m34n3c51ifhd5g";
-      name = "knavalbattle-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/knavalbattle-17.12.2.tar.xz";
+      sha256 = "0iil9kw7xhjq8ll93hcvcm9apigrys89nj7j2bpvs00208dcyv9c";
+      name = "knavalbattle-17.12.2.tar.xz";
     };
   };
   knetwalk = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/knetwalk-17.12.1.tar.xz";
-      sha256 = "078gzqyq33val8kvsfw63r0jhnh8q2lwv7p11a8z2qy44cp0bg25";
-      name = "knetwalk-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/knetwalk-17.12.2.tar.xz";
+      sha256 = "0l98h7grhgddawbn9apm0zifxpdssdkp29cdrcyv025h72dhj5ih";
+      name = "knetwalk-17.12.2.tar.xz";
     };
   };
   knotes = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/knotes-17.12.1.tar.xz";
-      sha256 = "16bjbxc5l3nxcw6k7csq0phr2hamk4ps1b367s8j6x5w81y3gypw";
-      name = "knotes-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/knotes-17.12.2.tar.xz";
+      sha256 = "009mia832fxll0a5kl5n16zsy54jvvm9gr2zp4qy5xmimci48llj";
+      name = "knotes-17.12.2.tar.xz";
     };
   };
   kolf = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kolf-17.12.1.tar.xz";
-      sha256 = "0sgn5702rf3kmflrb0dxlgvx0lb7ajfyq6izzqh147kkp9s8h44i";
-      name = "kolf-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kolf-17.12.2.tar.xz";
+      sha256 = "12zxqa88jsg4zf68ndw32gw7l6sjjzq6pkkj0a55wcwsdph59666";
+      name = "kolf-17.12.2.tar.xz";
     };
   };
   kollision = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kollision-17.12.1.tar.xz";
-      sha256 = "08px3m7jl78cg4mbsfwp4xa0fm7kp0p12zb973iy2ipqnhp1wkqp";
-      name = "kollision-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kollision-17.12.2.tar.xz";
+      sha256 = "1lzc0gih4lcw5dbrkkz0411al1xsjnqi1xzdwa2cijlka1py028g";
+      name = "kollision-17.12.2.tar.xz";
     };
   };
   kolourpaint = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kolourpaint-17.12.1.tar.xz";
-      sha256 = "1cdz7dhjmg757y70lzsxzsn1k2ih2q89vdcy8vgwggx9b47xgbar";
-      name = "kolourpaint-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kolourpaint-17.12.2.tar.xz";
+      sha256 = "0jd2r9jv0g1wrqvx7dwniv8an4miv3wjl3ym4rkczpdsjh3smc7c";
+      name = "kolourpaint-17.12.2.tar.xz";
     };
   };
   kompare = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kompare-17.12.1.tar.xz";
-      sha256 = "09w9g20hkgnvdv7g27pmw3kb82f52ia30fbg9dswbv5snjr82db3";
-      name = "kompare-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kompare-17.12.2.tar.xz";
+      sha256 = "0cww2zhvf97zya2wpmc9hyk1vp3za8r8xvxc0l4whcm33w0fwgc9";
+      name = "kompare-17.12.2.tar.xz";
     };
   };
   konqueror = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/konqueror-17.12.1.tar.xz";
-      sha256 = "0nfsfzyzd27m9sxrs2yx2rywkj31ip0qkna5frflsh4fa13jbnjw";
-      name = "konqueror-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/konqueror-17.12.2.tar.xz";
+      sha256 = "08yyxkrc4rx8y166p8r871rs3b6gxq6fkrnfbg9j4n3387rpg64f";
+      name = "konqueror-17.12.2.tar.xz";
     };
   };
   konquest = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/konquest-17.12.1.tar.xz";
-      sha256 = "1yph9hp40v1z9kfz7n72hi7y17fbrsgfn7jqdyk0dc7j3ldhji5y";
-      name = "konquest-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/konquest-17.12.2.tar.xz";
+      sha256 = "18c30b1z0jalkwcgdg6w5y4nl1j2iapp7588qk1zip3nfvgbdpky";
+      name = "konquest-17.12.2.tar.xz";
     };
   };
   konsole = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/konsole-17.12.1.tar.xz";
-      sha256 = "0k8d5am4qb5p1w02fbn164ffwlg1mg5hjxh5848dvrip8gxhhq40";
-      name = "konsole-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/konsole-17.12.2.tar.xz";
+      sha256 = "1dbsmfqw0d1f0nhmhz61rhy6spcfvv54j7v05axjhh870wyfmrpc";
+      name = "konsole-17.12.2.tar.xz";
     };
   };
   kontact = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kontact-17.12.1.tar.xz";
-      sha256 = "1ml71112422sggpi7y3lyn0gs374k99hpy9g4991vsyx53z5yn53";
-      name = "kontact-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kontact-17.12.2.tar.xz";
+      sha256 = "0qn1iha7g6i85va7bvcagxjx3qk0g9lpaqikn2fvlz22sgv45a2q";
+      name = "kontact-17.12.2.tar.xz";
     };
   };
   kontactinterface = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kontactinterface-17.12.1.tar.xz";
-      sha256 = "13a898b60mfbi6ara411ns0b7r57vfsq3wbdkq2c6fag5jsafaxl";
-      name = "kontactinterface-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kontactinterface-17.12.2.tar.xz";
+      sha256 = "044dys074cgahspx9h3bz8a807r5975b25pwjxwimr9vg4ln37d3";
+      name = "kontactinterface-17.12.2.tar.xz";
     };
   };
   korganizer = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/korganizer-17.12.1.tar.xz";
-      sha256 = "0qrqmiv86f17w8ycfxk8dj3r5ajzyp667kd8cq9yz9xzzf76xhlh";
-      name = "korganizer-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/korganizer-17.12.2.tar.xz";
+      sha256 = "0ijw3dq0c21c11a4bhdpgd1ailamrhknim4bs4ix1fgriycwpz31";
+      name = "korganizer-17.12.2.tar.xz";
     };
   };
   kpat = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kpat-17.12.1.tar.xz";
-      sha256 = "1f12jad1439zbrmya1hwbfsz6mxgjncchy94a1ynic5p8ixmja32";
-      name = "kpat-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kpat-17.12.2.tar.xz";
+      sha256 = "1yy81rv29wfym74709hrz67ms6af408ni5dbnpwjniz86fx2jnxs";
+      name = "kpat-17.12.2.tar.xz";
     };
   };
   kpimtextedit = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kpimtextedit-17.12.1.tar.xz";
-      sha256 = "08qcrd6ii0hp8afjwk2g64lvxyndy36lnzklc8hszls82h5qablp";
-      name = "kpimtextedit-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kpimtextedit-17.12.2.tar.xz";
+      sha256 = "1bj3ccvccwg1x5px080w7c3adkjsl1z886bxdimdf84pdxj2fm65";
+      name = "kpimtextedit-17.12.2.tar.xz";
     };
   };
   kqtquickcharts = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kqtquickcharts-17.12.1.tar.xz";
-      sha256 = "09ppnv95dxrl1wr4h9kmxjhrj8q3h40jjjz68k3d9nzhzb1lz7vi";
-      name = "kqtquickcharts-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kqtquickcharts-17.12.2.tar.xz";
+      sha256 = "05xsvc4ppncpjj0w5j7m5075ydxjnln8kjfd002c1m2a755brv5j";
+      name = "kqtquickcharts-17.12.2.tar.xz";
     };
   };
   krdc = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/krdc-17.12.1.tar.xz";
-      sha256 = "1hs7f55s8r6f9h1f5g357zvdzn1dgw5y9pih9n3yxa2522bh0j7r";
-      name = "krdc-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/krdc-17.12.2.tar.xz";
+      sha256 = "0m9ij015cs8qb1sbiysy27jrz070x9dkrbkrsqy3a2n9dkv7jjz0";
+      name = "krdc-17.12.2.tar.xz";
     };
   };
   kreversi = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kreversi-17.12.1.tar.xz";
-      sha256 = "0vgxwv0cpnpr4q2fdgc1nsrxrac59db558gwbw706a2yh3bn69dk";
-      name = "kreversi-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kreversi-17.12.2.tar.xz";
+      sha256 = "1qx0lv85pn98wbaskk0ihg3zywwfj9p0l30jjq67my254qlbaqpk";
+      name = "kreversi-17.12.2.tar.xz";
     };
   };
   krfb = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/krfb-17.12.1.tar.xz";
-      sha256 = "101h35f8vk3fgbjpw3f32cs6nc184z43qd3q345cq564cmh6h7z3";
-      name = "krfb-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/krfb-17.12.2.tar.xz";
+      sha256 = "1ggi0rmb0jx9pkqcvml5q6gxzzng5mdpyj8m9knknhmdx0y19k1b";
+      name = "krfb-17.12.2.tar.xz";
     };
   };
   kross-interpreters = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kross-interpreters-17.12.1.tar.xz";
-      sha256 = "1n9y7ynnkg8h61kyv894bwja3i2z1a5h2542flriny9788xfwwp0";
-      name = "kross-interpreters-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kross-interpreters-17.12.2.tar.xz";
+      sha256 = "05fd5cbgh81qmffbkmn3zanlrdjdqcgyafcw4jxsfvqb556wdvzv";
+      name = "kross-interpreters-17.12.2.tar.xz";
     };
   };
   kruler = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kruler-17.12.1.tar.xz";
-      sha256 = "0yxyqrz901fimdqap20rdarikdlcd9rlxmsl7dbfgrgjygxdhwlf";
-      name = "kruler-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kruler-17.12.2.tar.xz";
+      sha256 = "1j39vrd98p3bxa5kggmg3ccx4wrn8hvd100p0njkd54wagm9r2m7";
+      name = "kruler-17.12.2.tar.xz";
     };
   };
   kshisen = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kshisen-17.12.1.tar.xz";
-      sha256 = "1sx1dcjg1pbww3xx3r8ackswp61nmlawi5nf38ppgnpmcgz3b7md";
-      name = "kshisen-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kshisen-17.12.2.tar.xz";
+      sha256 = "02ihwa8zhaig97z14l3jx6c7swsm8aq5107n41h0z0lzf7sir47g";
+      name = "kshisen-17.12.2.tar.xz";
     };
   };
   ksirk = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ksirk-17.12.1.tar.xz";
-      sha256 = "112m9liq8xfjqnz0fbb7qpi54vys4mcp3i0zvph8i7aidqch6jbk";
-      name = "ksirk-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ksirk-17.12.2.tar.xz";
+      sha256 = "049za390509m4gsmjybhidbq3p2qss47whwfmzcj6lpcxf0fsrja";
+      name = "ksirk-17.12.2.tar.xz";
     };
   };
   ksmtp = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ksmtp-17.12.1.tar.xz";
-      sha256 = "11y0pwfy2pzjj678b53x222x0vzbxsng8j936s4afy1dbpx66ms2";
-      name = "ksmtp-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ksmtp-17.12.2.tar.xz";
+      sha256 = "0g6sjn5vkkwcdqjhpws86l5dhwilxrqqif50dndc2fyiak6x796n";
+      name = "ksmtp-17.12.2.tar.xz";
     };
   };
   ksnakeduel = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ksnakeduel-17.12.1.tar.xz";
-      sha256 = "1py4zcn311kh4kjzmwrviy91i9gj94fivdqyvfhzkbis59hwvnf4";
-      name = "ksnakeduel-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ksnakeduel-17.12.2.tar.xz";
+      sha256 = "1gqgw47im2sifxskhbgmg5rr6clvswcz81sinqffmjmpwgrabif7";
+      name = "ksnakeduel-17.12.2.tar.xz";
     };
   };
   kspaceduel = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kspaceduel-17.12.1.tar.xz";
-      sha256 = "16flrinzg2pysgab2mygijc9pb96ps28pk4ybnxc5bswzhkbhqyz";
-      name = "kspaceduel-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kspaceduel-17.12.2.tar.xz";
+      sha256 = "13636n466yna04wga7f206gw1scnjr3w3x59hwi4mdr0sghz9a7i";
+      name = "kspaceduel-17.12.2.tar.xz";
     };
   };
   ksquares = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ksquares-17.12.1.tar.xz";
-      sha256 = "0ma162lsh0vgis1qgsbav6w3v628s29mj4hgs05hlhl576f7h1zw";
-      name = "ksquares-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ksquares-17.12.2.tar.xz";
+      sha256 = "1csw9kns4b258k1hwcshw01bxbzfa1kclbd4w5fail1qp5xs7x7d";
+      name = "ksquares-17.12.2.tar.xz";
     };
   };
   ksudoku = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ksudoku-17.12.1.tar.xz";
-      sha256 = "16d2r0vwy1yzwlkvwq98by35zpg6w35j2npfzacjzmy5xxq2k63m";
-      name = "ksudoku-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ksudoku-17.12.2.tar.xz";
+      sha256 = "0rwgzg0i8s4b7af2dhzccaklbg3rj0khyjsiawijw66p9gs9cczy";
+      name = "ksudoku-17.12.2.tar.xz";
     };
   };
   ksystemlog = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ksystemlog-17.12.1.tar.xz";
-      sha256 = "03f0pjxc8zbkn47csm45dqswl9sc37cfyawlmnl7pwjbsqmimpi6";
-      name = "ksystemlog-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ksystemlog-17.12.2.tar.xz";
+      sha256 = "1aw1m1kv3si3qqzhs5mdynmf2b8s2dpsjnb7h0c1l39kq7mbgc9i";
+      name = "ksystemlog-17.12.2.tar.xz";
     };
   };
   kteatime = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kteatime-17.12.1.tar.xz";
-      sha256 = "0zvr3qkasnf26m6x2lg0pa7m3f2va4favz2sdav0g2ix9jdglqz6";
-      name = "kteatime-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kteatime-17.12.2.tar.xz";
+      sha256 = "13p1v7ic64rfff7md7f33xv9pl89sgjig35q78q31h5q42k6qzv9";
+      name = "kteatime-17.12.2.tar.xz";
     };
   };
   ktimer = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktimer-17.12.1.tar.xz";
-      sha256 = "00v8za6dhs7lb2aynlsrfjdq1zzbrxcxk7hr6x5vrxw7q6wp730c";
-      name = "ktimer-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktimer-17.12.2.tar.xz";
+      sha256 = "1263bsqz23064v7qnrz51nbbckld3d2vz80cm6z43vcis236bvh2";
+      name = "ktimer-17.12.2.tar.xz";
     };
   };
   ktnef = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktnef-17.12.1.tar.xz";
-      sha256 = "0b6axld4h9dr1a4cr650ibgm2avp1yynwvfyz1s8jaz58lpw8l1b";
-      name = "ktnef-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktnef-17.12.2.tar.xz";
+      sha256 = "05cj5lghqj8js0bd14w6kbpl29wslyh36yn57sdf5dfbgpnn9a7v";
+      name = "ktnef-17.12.2.tar.xz";
     };
   };
   ktouch = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktouch-17.12.1.tar.xz";
-      sha256 = "006ng7ajz4x37k2zy2gk7i1wpw2f2yqwvx6lc7vny3s8hz61a8zr";
-      name = "ktouch-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktouch-17.12.2.tar.xz";
+      sha256 = "1jqc0i6n70vjy6ipgv4swnd8xp404d8frax6nfd4rv3gmn68l5q4";
+      name = "ktouch-17.12.2.tar.xz";
     };
   };
   ktp-accounts-kcm = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktp-accounts-kcm-17.12.1.tar.xz";
-      sha256 = "003v1228nk2x8h9r8698fij1q461ibs76ycybgk2611r547jqwxm";
-      name = "ktp-accounts-kcm-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktp-accounts-kcm-17.12.2.tar.xz";
+      sha256 = "1qfq2sg2pzv2gkr87yb3r5j0xy0f1j56cxys8c1zijpglfy6a41z";
+      name = "ktp-accounts-kcm-17.12.2.tar.xz";
     };
   };
   ktp-approver = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktp-approver-17.12.1.tar.xz";
-      sha256 = "0f3cqq005c2363b23c393qcml84g3h23906rsnc6id0b2zcdfkp3";
-      name = "ktp-approver-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktp-approver-17.12.2.tar.xz";
+      sha256 = "0jhzazj42qigdbzjidpnkqlsndv3ias80ik033hzks6m22c20bz6";
+      name = "ktp-approver-17.12.2.tar.xz";
     };
   };
   ktp-auth-handler = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktp-auth-handler-17.12.1.tar.xz";
-      sha256 = "0z6c1p7v8zkj54knpxvcnk1xk88ncm751nd6j2lrzg3fxnk4kdyj";
-      name = "ktp-auth-handler-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktp-auth-handler-17.12.2.tar.xz";
+      sha256 = "0h81j79285k872wfyflabk6j4s3y7fi0nv41c9n6rnsdv91yvwpk";
+      name = "ktp-auth-handler-17.12.2.tar.xz";
     };
   };
   ktp-call-ui = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktp-call-ui-17.12.1.tar.xz";
-      sha256 = "07x0n8b21sfrc01rvya51rg0shvbi265i2pzc0c3kv0d6di74bs1";
-      name = "ktp-call-ui-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktp-call-ui-17.12.2.tar.xz";
+      sha256 = "1nh6a7gf3qp3vgw32rbh196ik5pzgad4z6lgrn59x36ssvcpmmd2";
+      name = "ktp-call-ui-17.12.2.tar.xz";
     };
   };
   ktp-common-internals = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktp-common-internals-17.12.1.tar.xz";
-      sha256 = "0h6vd98168rs1rcxpj43c7i57yd4lch95qxihy32l8nbyjxn0cc2";
-      name = "ktp-common-internals-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktp-common-internals-17.12.2.tar.xz";
+      sha256 = "18i311hnyd7lwvv6c08dk674w77q1sk3bggj5mp94r987507kns4";
+      name = "ktp-common-internals-17.12.2.tar.xz";
     };
   };
   ktp-contact-list = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktp-contact-list-17.12.1.tar.xz";
-      sha256 = "1b8x9mxd00f9zvlni95q6arvv912srsshgdfrig6jl8l94aknhfz";
-      name = "ktp-contact-list-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktp-contact-list-17.12.2.tar.xz";
+      sha256 = "1fzw7mqk65ry16bpbrh9zp7rpcbdgjabcsw23xdz08dzl86gji24";
+      name = "ktp-contact-list-17.12.2.tar.xz";
     };
   };
   ktp-contact-runner = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktp-contact-runner-17.12.1.tar.xz";
-      sha256 = "03bxpcgxazp4g44iidbc2y8a4i147bxvm9hqkglv5bdy86lvg0y3";
-      name = "ktp-contact-runner-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktp-contact-runner-17.12.2.tar.xz";
+      sha256 = "0qmwajxqhd2m2p9jnyqq5c8i1a02r8mc20limrikvg2m25cg8ii9";
+      name = "ktp-contact-runner-17.12.2.tar.xz";
     };
   };
   ktp-desktop-applets = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktp-desktop-applets-17.12.1.tar.xz";
-      sha256 = "1qb54wpyh5pz4d0nan02gkf2n16cvq2cfj61vpi2xml6cb1yqypf";
-      name = "ktp-desktop-applets-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktp-desktop-applets-17.12.2.tar.xz";
+      sha256 = "02s5b2lgcsslr2zavijp457kngmdall03li9wlgg31kxyqwrycwc";
+      name = "ktp-desktop-applets-17.12.2.tar.xz";
     };
   };
   ktp-filetransfer-handler = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktp-filetransfer-handler-17.12.1.tar.xz";
-      sha256 = "1976sjks028faahm6gha2kd0if0czbiyplj2vq9x1jnwh9fcbvcx";
-      name = "ktp-filetransfer-handler-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktp-filetransfer-handler-17.12.2.tar.xz";
+      sha256 = "1vc8w0aq16rfcwf48s3178y2qmz6r03bsdrgn2mkxscj8z4rv8j5";
+      name = "ktp-filetransfer-handler-17.12.2.tar.xz";
     };
   };
   ktp-kded-module = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktp-kded-module-17.12.1.tar.xz";
-      sha256 = "1l8jkixyc41irmf8ak358nfkn6m7nab5a2hxzfhgzi4grr2cassc";
-      name = "ktp-kded-module-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktp-kded-module-17.12.2.tar.xz";
+      sha256 = "1is5l0ammvqqp4cz9hk9ra63rv5kphy58b1b1qh1vwdhbc74cdx6";
+      name = "ktp-kded-module-17.12.2.tar.xz";
     };
   };
   ktp-send-file = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktp-send-file-17.12.1.tar.xz";
-      sha256 = "0fhqf15dl0rq1dlgb42na64dj5sr53hqdgk4fghjpma4lvr8qd4p";
-      name = "ktp-send-file-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktp-send-file-17.12.2.tar.xz";
+      sha256 = "13xq1slbr6qhjq135kxcxmv9lk5w68i6zkc47ffj76x40hdryh34";
+      name = "ktp-send-file-17.12.2.tar.xz";
     };
   };
   ktp-text-ui = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktp-text-ui-17.12.1.tar.xz";
-      sha256 = "0zjvxncvr1cbis2amd0s5x3kxgd2dw4mcjbfnqgf30mjbg13bn5m";
-      name = "ktp-text-ui-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktp-text-ui-17.12.2.tar.xz";
+      sha256 = "166ya2nggpljf591rvscd2gqbi8fbr2zq06v512clraawfzgbrqa";
+      name = "ktp-text-ui-17.12.2.tar.xz";
     };
   };
   ktuberling = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/ktuberling-17.12.1.tar.xz";
-      sha256 = "0b1wfmkd8lxh0cdalcniwz53wkv3iqlgfcb5wkp40xk4yzgm1i2g";
-      name = "ktuberling-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/ktuberling-17.12.2.tar.xz";
+      sha256 = "05h47my9f167gi811nzpdn6sdn0k7bdbr582rrm6j1gpjgay2d16";
+      name = "ktuberling-17.12.2.tar.xz";
     };
   };
   kturtle = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kturtle-17.12.1.tar.xz";
-      sha256 = "1f1gij16s5501p41h6m9z5qf8ldix4avw7cgxcib0s273fds8wxl";
-      name = "kturtle-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kturtle-17.12.2.tar.xz";
+      sha256 = "0xk3dpnld7f58b9p1hgcv6afvay1yhcm285jq22qa29wi2ckhk6m";
+      name = "kturtle-17.12.2.tar.xz";
     };
   };
   kubrick = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kubrick-17.12.1.tar.xz";
-      sha256 = "15vy1srmfsbxcjrm2jp0yqqn0x984jlblapma6jvgpcygxf2cxjg";
-      name = "kubrick-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kubrick-17.12.2.tar.xz";
+      sha256 = "0f5b3z91w4g8kl11wv43xn7n92dcfpmga51nw20wk4vsfmrwgpc9";
+      name = "kubrick-17.12.2.tar.xz";
     };
   };
   kwalletmanager = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kwalletmanager-17.12.1.tar.xz";
-      sha256 = "00x122kr7vbf6wans95spq0qxlavnjnp25h1pqzxg4y4sqdgy88p";
-      name = "kwalletmanager-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kwalletmanager-17.12.2.tar.xz";
+      sha256 = "0aqdlm87hxw8d28jr9hhvpjcjs939595vxhg8p5bw5dzanj48zkv";
+      name = "kwalletmanager-17.12.2.tar.xz";
     };
   };
   kwave = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kwave-17.12.1.tar.xz";
-      sha256 = "0ry9hgmkhs6sx9plqzyds5qn0b7qvq9g2hhxrycahsaj2q9kwk8a";
-      name = "kwave-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kwave-17.12.2.tar.xz";
+      sha256 = "1l5mdy1qdzw3lmrmvylcjj4wc9xg6brcd7qd20fsanzfv7w8if6k";
+      name = "kwave-17.12.2.tar.xz";
     };
   };
   kwordquiz = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/kwordquiz-17.12.1.tar.xz";
-      sha256 = "1a427jy3vyqc3jadrlwfvq8gh8zx6mfwrnwwaf4skixlwgnpwcp4";
-      name = "kwordquiz-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/kwordquiz-17.12.2.tar.xz";
+      sha256 = "175cf0qvw7qiifbqbgsg036n125gqpbpw7v1qq81hfg8nl0zpy2h";
+      name = "kwordquiz-17.12.2.tar.xz";
     };
   };
   libgravatar = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libgravatar-17.12.1.tar.xz";
-      sha256 = "0v0xnmfv272hppv7ccdj3ccq6g344v1n883pcp0fbsppkhrfwbwq";
-      name = "libgravatar-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libgravatar-17.12.2.tar.xz";
+      sha256 = "1vps67mbjh31y7q19wr1km0n35drimc7gi4xyhfx17l8k87nrx7a";
+      name = "libgravatar-17.12.2.tar.xz";
     };
   };
   libkcddb = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libkcddb-17.12.1.tar.xz";
-      sha256 = "03iz1cf69pzk0vfgjkdfwlp3iq2zj3ybzqp8mds9m7725qad35bq";
-      name = "libkcddb-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libkcddb-17.12.2.tar.xz";
+      sha256 = "1hqrpnfy5gzknvvcfmbp2axx4qbk0qkl47rmhr8gmpdvlkh33cny";
+      name = "libkcddb-17.12.2.tar.xz";
     };
   };
   libkcompactdisc = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libkcompactdisc-17.12.1.tar.xz";
-      sha256 = "19ifymhr3wbf3bcsdhdbjqwnnbqrdhkxc6bq35av2n40b7395avc";
-      name = "libkcompactdisc-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libkcompactdisc-17.12.2.tar.xz";
+      sha256 = "12dcyxjr6b6i8zfk3i17ah0kc3x0d9ixy65wj3zw1gf4mmdzgpbk";
+      name = "libkcompactdisc-17.12.2.tar.xz";
     };
   };
   libkdcraw = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libkdcraw-17.12.1.tar.xz";
-      sha256 = "05ji1s7p5sdcvrzmivp7dw98kxl6zm8vsfb6wc41x1syp18xvbxj";
-      name = "libkdcraw-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libkdcraw-17.12.2.tar.xz";
+      sha256 = "1qfzyy4952b2lc3619bbzqffvrphqsq16z89bxb4pn1ad796zn62";
+      name = "libkdcraw-17.12.2.tar.xz";
     };
   };
   libkdegames = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libkdegames-17.12.1.tar.xz";
-      sha256 = "0sqiq3xsfigd77czw3mrgrdn4bhz6f08ibv0yy4vfvgzx5ldysbp";
-      name = "libkdegames-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libkdegames-17.12.2.tar.xz";
+      sha256 = "1v3a9240crfpjdwpbz0bdwv06572s99h80l53vf3zwmqw5yk05z4";
+      name = "libkdegames-17.12.2.tar.xz";
     };
   };
   libkdepim = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libkdepim-17.12.1.tar.xz";
-      sha256 = "1h6gcn1lsk9zd2q4m4w4gwgx2nawf7iqzxq4liyrx9s0j980v9vy";
-      name = "libkdepim-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libkdepim-17.12.2.tar.xz";
+      sha256 = "069x28ia6d95rm1g3mr339v7rdvlmiz20y4kddp2acja53b0sagg";
+      name = "libkdepim-17.12.2.tar.xz";
     };
   };
   libkeduvocdocument = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libkeduvocdocument-17.12.1.tar.xz";
-      sha256 = "0qfhfhy18w5fa8989hjqrk9910sb3j99xpp55zkwvfssxjnrwwxj";
-      name = "libkeduvocdocument-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libkeduvocdocument-17.12.2.tar.xz";
+      sha256 = "1g4zldr9ys7ddxqfkkhlyqgq623q303011ifaraid5zpiql092qd";
+      name = "libkeduvocdocument-17.12.2.tar.xz";
     };
   };
   libkexiv2 = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libkexiv2-17.12.1.tar.xz";
-      sha256 = "18has05apcfw2qvyzkk4ywi0vbx46k0abvk6ai2rpag9kqw877i9";
-      name = "libkexiv2-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libkexiv2-17.12.2.tar.xz";
+      sha256 = "0jr9wpnl80xala60yz4zd5j9nd1bv56y688fldr5dxx25ljavn24";
+      name = "libkexiv2-17.12.2.tar.xz";
     };
   };
   libkgapi = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libkgapi-17.12.1.tar.xz";
-      sha256 = "177m12jfswilb1qfi7zyhymscxrz52wplm8nzlrmwv7pr3brnmnl";
-      name = "libkgapi-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libkgapi-17.12.2.tar.xz";
+      sha256 = "1vki4sxb7dzg202waqqyvjwsx8yhx8cfp2wk4b6p81hfaq8a1syd";
+      name = "libkgapi-17.12.2.tar.xz";
     };
   };
   libkgeomap = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libkgeomap-17.12.1.tar.xz";
-      sha256 = "0zixbp0vkmf8nrlzhwkbsgn0bxpwx6xcgslhjrl5q8w1bvp2hfjp";
-      name = "libkgeomap-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libkgeomap-17.12.2.tar.xz";
+      sha256 = "1spq6g56ih6wlc2qasf3fkpkn7m4gsbn14p6ja60cr1gvf4p9j79";
+      name = "libkgeomap-17.12.2.tar.xz";
     };
   };
   libkipi = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libkipi-17.12.1.tar.xz";
-      sha256 = "11438klx8lj16py2vvyahs1pf0as0dx1523bsrxy8hmyx5gsivas";
-      name = "libkipi-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libkipi-17.12.2.tar.xz";
+      sha256 = "180yg24iqh02nkcv7jbvm10lr7z7qagapjh8zarpmh6r2s3c0nh5";
+      name = "libkipi-17.12.2.tar.xz";
     };
   };
   libkleo = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libkleo-17.12.1.tar.xz";
-      sha256 = "1mbiljd4xpzlmf7xmf21pr2ka0cz5sg4f38z0m9if61903ag2bcc";
-      name = "libkleo-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libkleo-17.12.2.tar.xz";
+      sha256 = "00nlspwnh9nvxarm34y9hdis3af2zkjf2flla4qwks5nhl7fgi8g";
+      name = "libkleo-17.12.2.tar.xz";
     };
   };
   libkmahjongg = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libkmahjongg-17.12.1.tar.xz";
-      sha256 = "1x8zbldp66my0pn4p44pg2wxybh7hq221bda91p2andaqa72nswq";
-      name = "libkmahjongg-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libkmahjongg-17.12.2.tar.xz";
+      sha256 = "0l8krpiyzlsn9awp8za10n9qhbac8nf98jiz7dxzn4qpniv45px5";
+      name = "libkmahjongg-17.12.2.tar.xz";
     };
   };
   libkomparediff2 = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libkomparediff2-17.12.1.tar.xz";
-      sha256 = "0jd700pjw51vyan5d22k6j60jgb95pfn2nvwz2nfs2f4xlsly1hz";
-      name = "libkomparediff2-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libkomparediff2-17.12.2.tar.xz";
+      sha256 = "07is7vn9wrivxpyd4s19371ffylj2x3s5zi14y8zr778nq68wrzq";
+      name = "libkomparediff2-17.12.2.tar.xz";
     };
   };
   libksane = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libksane-17.12.1.tar.xz";
-      sha256 = "1jglv4b5zqgs3qysadcrizfwlzwv39w369hhj4180xjjc07kxjw0";
-      name = "libksane-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libksane-17.12.2.tar.xz";
+      sha256 = "01d182hnrj6n8qmh85pkwmjdyhfy0n946zp40r9r6avh9ajrx5nd";
+      name = "libksane-17.12.2.tar.xz";
     };
   };
   libksieve = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/libksieve-17.12.1.tar.xz";
-      sha256 = "1w3cqhig1nwy5q98503f0s6i0vibsrq35js8y9vqqa22hyksy8xb";
-      name = "libksieve-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/libksieve-17.12.2.tar.xz";
+      sha256 = "1nfy96ykaxdm5h67bhykgdcmlidsjgvbsf52qs5f7j7iyl3w4nhr";
+      name = "libksieve-17.12.2.tar.xz";
     };
   };
   lokalize = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/lokalize-17.12.1.tar.xz";
-      sha256 = "0ygsz8mbind93sc148rd3asdpzlki1ps7xkc6y2zgf069ikrp504";
-      name = "lokalize-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/lokalize-17.12.2.tar.xz";
+      sha256 = "18nama2dafhp5v1lvxibm92cxwdldkxs778s948qnb7xh65mxvsb";
+      name = "lokalize-17.12.2.tar.xz";
     };
   };
   lskat = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/lskat-17.12.1.tar.xz";
-      sha256 = "036lhwx0d49cb2ml514rawbcngrrxhly4cjrrhf21yw8apxfwa92";
-      name = "lskat-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/lskat-17.12.2.tar.xz";
+      sha256 = "0a4gch1krd7xpvxkscy7prsfb72dcg78alk4vz2z70nfn11zrzv3";
+      name = "lskat-17.12.2.tar.xz";
     };
   };
   mailcommon = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/mailcommon-17.12.1.tar.xz";
-      sha256 = "0m9ng8mj0hwj5zg9da5cqy8paa80q2v92qn6a6b1wm34ylbdfhsm";
-      name = "mailcommon-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/mailcommon-17.12.2.tar.xz";
+      sha256 = "0ikmbg91f4p7d4qb7nx05n5mlbmmcdwzgw0xvdsib7vkj5cfrxp2";
+      name = "mailcommon-17.12.2.tar.xz";
     };
   };
   mailimporter = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/mailimporter-17.12.1.tar.xz";
-      sha256 = "1rd55alsa502v1vrp2fbmfxyf29h248n78d9wcw93grwg50sabdn";
-      name = "mailimporter-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/mailimporter-17.12.2.tar.xz";
+      sha256 = "1p4dc7xwk6wx1j6xk3h5w5cnzm665pzrmc70v8l5898025i94ml5";
+      name = "mailimporter-17.12.2.tar.xz";
     };
   };
   marble = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/marble-17.12.1.tar.xz";
-      sha256 = "0g4vr27ggc3xdr274apcmv8ys9584lzxxc78ssr16snb1rkrb9my";
-      name = "marble-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/marble-17.12.2.tar.xz";
+      sha256 = "1y6wbh571g2d8gzg9pwdbsc4a4bl67fmvnkf65acs182zfc2x7jy";
+      name = "marble-17.12.2.tar.xz";
     };
   };
   mbox-importer = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/mbox-importer-17.12.1.tar.xz";
-      sha256 = "1vm0f2yb5adrnsdl6dy34bb7zggrh6xd89n0cvz1grq5fsrb3ilk";
-      name = "mbox-importer-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/mbox-importer-17.12.2.tar.xz";
+      sha256 = "0f1zvp31m6i20jd7xi9hxks8759mvbsj57r2nciwhc47r3m9wi3l";
+      name = "mbox-importer-17.12.2.tar.xz";
     };
   };
   messagelib = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/messagelib-17.12.1.tar.xz";
-      sha256 = "1nc6vh68fy26kcisqbr4lvhwxx3dzmjdawgzhy7jnbhdx36siw3b";
-      name = "messagelib-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/messagelib-17.12.2.tar.xz";
+      sha256 = "17fayacl3m7p0w0rf724fhdm287dz8n03pyliapsxybldgp2rlaz";
+      name = "messagelib-17.12.2.tar.xz";
     };
   };
   minuet = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/minuet-17.12.1.tar.xz";
-      sha256 = "1y7l1qh3vwhhkv9mp165kyhf3ps4xzclnmbml3kpczhgxs0hzw47";
-      name = "minuet-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/minuet-17.12.2.tar.xz";
+      sha256 = "17gwnh0bd2a7fvxbjhwadh0gvb0zly71lwv8znkb18dwsyd38v3r";
+      name = "minuet-17.12.2.tar.xz";
     };
   };
   okteta = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/okteta-17.12.1.tar.xz";
-      sha256 = "1ryaqbccqlir910v628wcv7gwp85w82d6f1lwwg92dh55zmlx6a4";
-      name = "okteta-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/okteta-17.12.2.tar.xz";
+      sha256 = "1k4b2m5pvrv1zxvm6pwmkl0ahh0ynkssa8z1v51a3hxlvw593b4d";
+      name = "okteta-17.12.2.tar.xz";
     };
   };
   okular = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/okular-17.12.1.tar.xz";
-      sha256 = "0rai5m7alks6lri2fwg07s842azd6q9xizwsk0ib4pnw07hj2fqj";
-      name = "okular-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/okular-17.12.2.tar.xz";
+      sha256 = "10rkrwp3rwccvqsw7njcmggw3jkj84fb90vkvqp8k2lmhnrz1ypx";
+      name = "okular-17.12.2.tar.xz";
     };
   };
   palapeli = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/palapeli-17.12.1.tar.xz";
-      sha256 = "0xbcfsrzlj41wr2fx0awgmvdxdd6y890sigf42nzi8mizvd70b5v";
-      name = "palapeli-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/palapeli-17.12.2.tar.xz";
+      sha256 = "0j9b4a6x3bp9bki2p79ksn86l16niixa2x8xx24vdnd9y71lp2yb";
+      name = "palapeli-17.12.2.tar.xz";
     };
   };
   parley = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/parley-17.12.1.tar.xz";
-      sha256 = "199qkhsrgcviyi3hfaazr8acd1xji1rraqvwlrb8b1bsrdnknbfs";
-      name = "parley-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/parley-17.12.2.tar.xz";
+      sha256 = "0kqvj1gwsv9kdac0zsv6cda34h8qx8xr43mgwk343c8pcwm1r2r5";
+      name = "parley-17.12.2.tar.xz";
     };
   };
   picmi = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/picmi-17.12.1.tar.xz";
-      sha256 = "024bia05vczjaz2df0lg4jqkjn8l7x36cjr6jkr0c77p37vm3w6k";
-      name = "picmi-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/picmi-17.12.2.tar.xz";
+      sha256 = "0ry4vvspa2mdvxrxvbqihkdh7qvsxhl9v7i07ycx3qs7sybf1rx4";
+      name = "picmi-17.12.2.tar.xz";
     };
   };
   pimcommon = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/pimcommon-17.12.1.tar.xz";
-      sha256 = "0wmlzx43730zgdvgnw1ljplspbg19r5i88s0nvz53s0fa70nbga2";
-      name = "pimcommon-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/pimcommon-17.12.2.tar.xz";
+      sha256 = "0frgn2shd2qzf4rbix9k4psy81b2yzsyy0sisy0ngc68gk5mdj8a";
+      name = "pimcommon-17.12.2.tar.xz";
     };
   };
   pim-data-exporter = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/pim-data-exporter-17.12.1.tar.xz";
-      sha256 = "0ryw03lb5lhj5k6g7rqnmmqfgrd6004im7p3wwf9v3ynmjbkx0v7";
-      name = "pim-data-exporter-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/pim-data-exporter-17.12.2.tar.xz";
+      sha256 = "1fbpz4sw4gn01yc7vzlj9v15wp3b6acbcd6xs9nsp3bfpb9mqd16";
+      name = "pim-data-exporter-17.12.2.tar.xz";
     };
   };
   pim-sieve-editor = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/pim-sieve-editor-17.12.1.tar.xz";
-      sha256 = "1adz9whyvqz0fw2ggkr7g8xd67m779vyymqbyx3h05kwmdy6kims";
-      name = "pim-sieve-editor-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/pim-sieve-editor-17.12.2.tar.xz";
+      sha256 = "1jwjgywqp23c17g08c18ajbl2dzq3h9vm94bmbjcan64isd03jr4";
+      name = "pim-sieve-editor-17.12.2.tar.xz";
     };
   };
   poxml = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/poxml-17.12.1.tar.xz";
-      sha256 = "1ynycpwvsx2514rar3ycvmyv6fj2ac1adxx2gcip9vkb4chija6b";
-      name = "poxml-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/poxml-17.12.2.tar.xz";
+      sha256 = "0amb095qjv8d22ny86rs6wj280b2ag2zpk7bzs5834m75wlmpg6w";
+      name = "poxml-17.12.2.tar.xz";
     };
   };
   print-manager = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/print-manager-17.12.1.tar.xz";
-      sha256 = "024hzc2ja1cb6wvag0w040q3ifrpzlb6s23d75hvkpyqqgi1qq5d";
-      name = "print-manager-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/print-manager-17.12.2.tar.xz";
+      sha256 = "0sz7xqcjc5ddxkc7gbl1h673ywp3ffhmx985jzpd296n6sjppc2v";
+      name = "print-manager-17.12.2.tar.xz";
     };
   };
   rocs = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/rocs-17.12.1.tar.xz";
-      sha256 = "04v3khfyz7gg7krn3v3j5885ivmf0avmgl5xwyqh8vy7zwxajvq7";
-      name = "rocs-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/rocs-17.12.2.tar.xz";
+      sha256 = "08flyrla2kqkdc94hd8w2inzmnmzvczcgwl9hzqxxzf3fsjnnfdl";
+      name = "rocs-17.12.2.tar.xz";
     };
   };
   signon-kwallet-extension = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/signon-kwallet-extension-17.12.1.tar.xz";
-      sha256 = "05w8hpxc2fmm5w1fj8df8dqj8hag62f154mpyiq5zy04a0j69mbl";
-      name = "signon-kwallet-extension-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/signon-kwallet-extension-17.12.2.tar.xz";
+      sha256 = "06l1mynl7wp1r3gmy5919dm0p19p23harsh6qwdvbi9lffy7ascp";
+      name = "signon-kwallet-extension-17.12.2.tar.xz";
     };
   };
   spectacle = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/spectacle-17.12.1.tar.xz";
-      sha256 = "0zl2wr9n5lb6ry5xp33wv73r5xkadm4zm1bnric85q383qzwzhvd";
-      name = "spectacle-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/spectacle-17.12.2.tar.xz";
+      sha256 = "0qhhnpdk4rqzpg3npj183nl7k1n4mvhcb97hydwaq51yh51r4gvj";
+      name = "spectacle-17.12.2.tar.xz";
     };
   };
   step = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/step-17.12.1.tar.xz";
-      sha256 = "027czrw3dkvcbw74jrh8qwi577zxb7hzbzmnpd7b01qal486qj0f";
-      name = "step-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/step-17.12.2.tar.xz";
+      sha256 = "1n9gd2sq2lvfmgvjdb8yn5g25j58jcb24qh8l41k1y0hgcbaxly7";
+      name = "step-17.12.2.tar.xz";
     };
   };
   svgpart = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/svgpart-17.12.1.tar.xz";
-      sha256 = "13g89s83y7wwwkx06zxcghcv9rdpziyq5f2lc81y583qsqg6j6lh";
-      name = "svgpart-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/svgpart-17.12.2.tar.xz";
+      sha256 = "1d7yrpnxc3sm3381fd9m3fiipi664vl8cz2li8dlw2y4pbgpx28g";
+      name = "svgpart-17.12.2.tar.xz";
     };
   };
   sweeper = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/sweeper-17.12.1.tar.xz";
-      sha256 = "0rhn2ia3sxjlig9vp15jdvi7ij5xgyn4bz8cbh5g93an79z4mi59";
-      name = "sweeper-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/sweeper-17.12.2.tar.xz";
+      sha256 = "1qi4kfd4p8xnykv3zn3sqkx4b605mwbnr6m9l6cr0v26c01yjq3k";
+      name = "sweeper-17.12.2.tar.xz";
     };
   };
   syndication = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/syndication-17.12.1.tar.xz";
-      sha256 = "1y8nsrbdc69cyh0rhjfvi99qx2fgvpvfsixpqjsyis1xhkxc3901";
-      name = "syndication-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/syndication-17.12.2.tar.xz";
+      sha256 = "1hcdk0apdrppfrjyfjm4cn0iyb1yrf7zq2wb2ipmxzca1hfgw4c0";
+      name = "syndication-17.12.2.tar.xz";
     };
   };
   umbrello = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/umbrello-17.12.1.tar.xz";
-      sha256 = "13krbjzg840rhr74zwday4p5min0zwrpxri6k1sdz7mhqm4lbj19";
-      name = "umbrello-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/umbrello-17.12.2.tar.xz";
+      sha256 = "1sm0drfsyyslls5n66mvjy2knbwykws34g74c6rn1mmmdpyp7b94";
+      name = "umbrello-17.12.2.tar.xz";
     };
   };
   zeroconf-ioslave = {
-    version = "17.12.1";
+    version = "17.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/applications/17.12.1/src/zeroconf-ioslave-17.12.1.tar.xz";
-      sha256 = "10n0zyr2by91d0985r8cq6d8p0h3pxxq3kckrz2pmafr0q7l1zqx";
-      name = "zeroconf-ioslave-17.12.1.tar.xz";
+      url = "${mirror}/stable/applications/17.12.2/src/zeroconf-ioslave-17.12.2.tar.xz";
+      sha256 = "09p55dmrsi8jyvs793ya2xzfbhm6f6gwg8ldri15v9n3if7crpzx";
+      name = "zeroconf-ioslave-17.12.2.tar.xz";
     };
   };
 }
diff --git a/pkgs/applications/misc/alacritty/default.nix b/pkgs/applications/misc/alacritty/default.nix
index 7bfcc6e72c89..0f629aace456 100644
--- a/pkgs/applications/misc/alacritty/default.nix
+++ b/pkgs/applications/misc/alacritty/default.nix
@@ -30,18 +30,18 @@ let
   ];
 in buildRustPackage rec {
   name = "alacritty-unstable-${version}";
-  version = "2017-12-29";
+  version = "2018-01-31";
 
   # At the moment we cannot handle git dependencies in buildRustPackage.
   # This fork only replaces rust-fontconfig/libfontconfig with a git submodules.
   src = fetchgit {
     url = https://github.com/Mic92/alacritty.git;
     rev = "rev-${version}";
-    sha256 = "0pk4b8kfxixmd9985v2fya1m7np8ggws8d9msw210drc0grwbfkd";
+    sha256 = "0jc8haijd6f8r5fqiknrvqnwc9q4cp93852lr2p7zak7dv29v45p";
     fetchSubmodules = true;
   };
 
-  cargoSha256 = "0acj526cx4xl52vbcbd3hp1klh4p756j6alxqqz3x715zi2dqkzf";
+  cargoSha256 = "0023jpc6krilmp5wzbbwapxafsi6m1k13mvjh4zlvls1nyyhk808";
 
   nativeBuildInputs = [
     cmake
diff --git a/pkgs/applications/misc/albert/default.nix b/pkgs/applications/misc/albert/default.nix
index 3a5fde287067..250590d0d302 100644
--- a/pkgs/applications/misc/albert/default.nix
+++ b/pkgs/applications/misc/albert/default.nix
@@ -3,13 +3,13 @@
 
 mkDerivation rec {
   name    = "albert-${version}";
-  version = "0.14.14";
+  version = "0.14.15";
 
   src = fetchFromGitHub {
     owner  = "albertlauncher";
     repo   = "albert";
     rev    = "v${version}";
-    sha256 = "1skh709f4y4p0vqabvvysn6fgws2yq8izbwkib7rfjc357chhmi7";
+    sha256 = "1rjp0bmzs8b9blbxz3sfcanyhgmds882pf1g3jx5qp85y64j8507";
     fetchSubmodules = true;
   };
 
diff --git a/pkgs/applications/misc/buku/default.nix b/pkgs/applications/misc/buku/default.nix
index 8aa191c0f3c2..e75076e53d1c 100644
--- a/pkgs/applications/misc/buku/default.nix
+++ b/pkgs/applications/misc/buku/default.nix
@@ -1,14 +1,14 @@
 { stdenv, python3, fetchFromGitHub }:
 
 with python3.pkgs; buildPythonApplication rec {
-  version = "3.4";
+  version = "3.6";
   name = "buku-${version}";
 
   src = fetchFromGitHub {
     owner = "jarun";
     repo = "buku";
     rev = "v${version}";
-    sha256 = "0v0wvsxw78g6yl606if25k1adghr5764chwy1kl7dsxvchqwvmg0";
+    sha256 = "1639sf200n9rxgkvvhlhnrjsb7vn42p1fl1rx562axh3vpr6j4c4";
   };
 
   nativeBuildInputs = [
@@ -33,7 +33,9 @@ with python3.pkgs; buildPythonApplication rec {
 
     # Disables a test which requires internet
     substituteInPlace tests/test_bukuDb.py \
-      --replace "@pytest.mark.slowtest" "@unittest.skip('skipping')"
+      --replace "@pytest.mark.slowtest" "@unittest.skip('skipping')" \
+      --replace "self.assertEqual(shorturl, 'http://tny.im/yt')" "" \
+      --replace "self.assertEqual(url, 'https://www.google.com')" ""
   '';
 
   installPhase = ''
diff --git a/pkgs/applications/misc/calcurse/default.nix b/pkgs/applications/misc/calcurse/default.nix
index d4b07cb91dcd..8800ebd83ca0 100644
--- a/pkgs/applications/misc/calcurse/default.nix
+++ b/pkgs/applications/misc/calcurse/default.nix
@@ -16,7 +16,7 @@ stdenv.mkDerivation rec {
   pythonEnv = python3Packages.python.buildEnv.override {
     extraLibs = [ python3Packages.httplib2 ];
   };
-  propogatedBuildInputs = [ pythonEnv ];
+  propagatedBuildInputs = [ pythonEnv ];
 
   postInstall = ''
     substituteInPlace $out/bin/calcurse-caldav --replace /usr/bin/python3 ${pythonEnv}/bin/python3
diff --git a/pkgs/applications/misc/calibre/default.nix b/pkgs/applications/misc/calibre/default.nix
index 919f949ff660..8924114013cf 100644
--- a/pkgs/applications/misc/calibre/default.nix
+++ b/pkgs/applications/misc/calibre/default.nix
@@ -5,12 +5,12 @@
 }:
 
 stdenv.mkDerivation rec {
-  version = "3.16.0";
+  version = "3.17.0";
   name = "calibre-${version}";
 
   src = fetchurl {
     url = "https://download.calibre-ebook.com/${version}/${name}.tar.xz";
-    sha256 = "0dsnn974lfd6xbnyjhgxl2hd07kjhm1w9plqi28mx8nqa8bwqira";
+    sha256 = "1w6hw1s0d4daa4q2ykzhxdndiq61l8z7ls7rxh7k7p62ia0i5sxp";
   };
 
   patches = [
diff --git a/pkgs/applications/misc/diff-pdf/default.nix b/pkgs/applications/misc/diff-pdf/default.nix
new file mode 100644
index 000000000000..467c2b3c2d59
--- /dev/null
+++ b/pkgs/applications/misc/diff-pdf/default.nix
@@ -0,0 +1,32 @@
+{ stdenv, fetchFromGitHub, autoconf, automake, pkgconfig, cairo, poppler, wxGTK ? null, wxmac ? null, darwin ? null }:
+
+let
+  wxInputs =
+    if stdenv.isDarwin then
+      [ wxmac darwin.apple_sdk.frameworks.Cocoa ]
+    else
+      [ wxGTK ];
+in
+stdenv.mkDerivation rec {
+  name = "diff-pdf-${version}";
+  version = "2017-12-30";
+
+  src = fetchFromGitHub {
+    owner = "vslavik";
+    repo = "diff-pdf";
+    rev = "c4d67226ec4c29b30a7399e75f80636ff8a6f9fc";
+    sha256 = "1c3ig7ckrg37p5vzvgjnsfdzdad328wwsx0r31lbs1d8pkjkgq3m";
+  };
+
+  nativeBuildInputs = [ autoconf automake pkgconfig ];
+  buildInputs = [ cairo poppler ] ++ wxInputs;
+
+  preConfigure = "./bootstrap";
+
+  meta = with stdenv.lib; {
+    homepage = http://vslavik.github.io/diff-pdf;
+    description = "Simple tool for visually comparing two PDF files";
+    license = licenses.gpl2;
+    maintainers = with maintainers; [ dtzWill ];
+  };
+}
diff --git a/pkgs/applications/misc/diffpdf/default.nix b/pkgs/applications/misc/diffpdf/default.nix
index fd3d0b35729e..144e1fa566ca 100644
--- a/pkgs/applications/misc/diffpdf/default.nix
+++ b/pkgs/applications/misc/diffpdf/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, qt4, poppler_qt4, qmake4Hook }:
+{ stdenv, fetchurl, fetchpatch, qmake, qttools, qtbase, poppler_qt5 }:
 
 stdenv.mkDerivation rec {
   version = "2.1.3";
@@ -9,13 +9,19 @@ stdenv.mkDerivation rec {
     sha256 = "0cr468fi0d512jjj23r5flfzx957vibc9c25gwwhi0d773h2w566";
   };
 
-  patches = [ ./fix_path_poppler_qt4.patch ];
+  patches = [
+    (fetchpatch {
+      url = https://raw.githubusercontent.com/gentoo/gentoo/9b971631588ff46e7c2d501bc35cd0d9ce2d98e2/app-text/diffpdf/files/diffpdf-2.1.3-qt5.patch;
+      sha256 = "0sax8gcqcmzf74hmdr3rarqs4nsxmml9qmh6pqyjmgl3lypxhafg";
+    })
+    ./fix_path_poppler_qt5.patch
+  ];
 
-  buildInputs = [ qt4 poppler_qt4 ];
-  nativeBuildInputs = [ qmake4Hook ];
+  nativeBuildInputs = [ qmake qttools ];
+  buildInputs = [ qtbase poppler_qt5 ];
 
   preConfigure = ''
-    substituteInPlace diffpdf.pro --replace @@NIX_POPPLER_QT4@@ ${poppler_qt4.dev}
+    substituteInPlace diffpdf.pro --replace @@NIX_POPPLER_QT5@@ ${poppler_qt5.dev}
     lrelease diffpdf.pro
   '';
 
diff --git a/pkgs/applications/misc/diffpdf/fix_path_poppler_qt4.patch b/pkgs/applications/misc/diffpdf/fix_path_poppler_qt5.patch
index e72cad8b7a25..9535ea2c6b0d 100644
--- a/pkgs/applications/misc/diffpdf/fix_path_poppler_qt4.patch
+++ b/pkgs/applications/misc/diffpdf/fix_path_poppler_qt5.patch
@@ -2,15 +2,15 @@ diff -uNr diffpdf-2.1.3/diffpdf.pro diffpdf-2.1.3-new/diffpdf.pro
 --- diffpdf-2.1.3/diffpdf.pro	2013-10-15 09:01:22.000000000 +0200
 +++ diffpdf-2.1.3-new/diffpdf.pro	2015-07-07 23:13:36.445572148 +0200
 @@ -47,9 +47,9 @@
- 	INCLUDEPATH += /c/poppler_lib/include/poppler/qt4
+ 	INCLUDEPATH += /c/poppler_lib/include/poppler/qt5
  	LIBS += -Wl,-rpath -Wl,/c/poppler_lib/bin -Wl,-L/c/poppler_lib/bin
      } else {
--	exists(/usr/include/poppler/qt4) {
+-	exists(/usr/include/poppler/qt5) {
 -	    INCLUDEPATH += /usr/include/poppler/cpp
--	    INCLUDEPATH += /usr/include/poppler/qt4
-+	exists(@@NIX_POPPLER_QT4@@/include/poppler/qt4) {
-+	    INCLUDEPATH += @@NIX_POPPLER_QT4@@/include/poppler/cpp
-+	    INCLUDEPATH += @@NIX_POPPLER_QT4@@/include/poppler/qt4
+-	    INCLUDEPATH += /usr/include/poppler/qt5
++	exists(@@NIX_POPPLER_QT5@@/include/poppler/qt5) {
++	    INCLUDEPATH += @@NIX_POPPLER_QT5@@/include/poppler/cpp
++	    INCLUDEPATH += @@NIX_POPPLER_QT5@@/include/poppler/qt5
  	} else {
  	    INCLUDEPATH += /usr/local/include/poppler/cpp
- 	    INCLUDEPATH += /usr/local/include/poppler/qt4
+ 	    INCLUDEPATH += /usr/local/include/poppler/qt5
diff --git a/pkgs/applications/misc/dockbarx/default.nix b/pkgs/applications/misc/dockbarx/default.nix
index cfe76701cebb..3888c4ce0a0d 100644
--- a/pkgs/applications/misc/dockbarx/default.nix
+++ b/pkgs/applications/misc/dockbarx/default.nix
@@ -1,14 +1,14 @@
 { stdenv, fetchFromGitHub, pythonPackages, gnome2, keybinder }:
 
 pythonPackages.buildPythonApplication rec {
-  ver = "0.92";
+  ver = "0.93";
   name = "dockbarx-${ver}";
 
   src = fetchFromGitHub {
     owner = "M7S";
     repo = "dockbarx";
     rev = ver;
-    sha256 = "17n7jc3bk3f2i0i1ddpp05bakifc8y5xppads7ihpkj3qw9g35vl";
+    sha256 = "1h1g2vag5vnx87sa1f0qi8rq7wlr2ymvkrdr08kk7cma4wk0x6hg";
   };
 
   postPatch = ''
diff --git a/pkgs/applications/misc/dump1090/default.nix b/pkgs/applications/misc/dump1090/default.nix
index 3e9fe133d93c..29f6c6085602 100644
--- a/pkgs/applications/misc/dump1090/default.nix
+++ b/pkgs/applications/misc/dump1090/default.nix
@@ -15,11 +15,11 @@ stdenv.mkDerivation rec {
 
   buildInputs = [ libusb rtl-sdr ];
 
-  makeFlags = [ "PREFIX=$out" ];
+  makeFlags = [ "PREFIX=$(out)" ];
 
   installPhase = ''
     mkdir -p $out/bin $out/share
-    cp -v dump1090 $out/bin/dump1090
+    cp -v dump1090 view1090 $out/bin
     cp -vr public_html $out/share/dump1090
   '';
 
diff --git a/pkgs/applications/misc/electrum-dash/default.nix b/pkgs/applications/misc/electrum-dash/default.nix
index bde8d5b81e3e..c98efa547b39 100644
--- a/pkgs/applications/misc/electrum-dash/default.nix
+++ b/pkgs/applications/misc/electrum-dash/default.nix
@@ -1,12 +1,13 @@
 { stdenv, fetchurl, python2Packages }:
 
 python2Packages.buildPythonApplication rec {
+  version = "2.9.3.1";
   name = "electrum-dash-${version}";
-  version = "2.4.1";
 
   src = fetchurl {
-    url = "https://github.com/dashpay/electrum-dash/releases/download/v${version}/Electrum-DASH-${version}.tar.gz";
-    sha256 = "02k7m7fyn0cvlgmwxr2gag7rf2knllkch1ma58shysp7zx9jb000";
+    url = "https://github.com/akhavr/electrum-dash/releases/download/${version}/Electrum-DASH-${version}.tar.gz";
+    #"https://github.com/dashpay/electrum-dash/releases/download/v${version}/Electrum-DASH-${version}.tar.gz";
+    sha256 = "9b7ac205f63fd4bfb15d77a34a4451ef82caecf096f31048a7603bd276dfc33e";
   };
 
   propagatedBuildInputs = with python2Packages; [
@@ -20,10 +21,11 @@ python2Packages.buildPythonApplication rec {
     pyqt4
     qrcode
     requests
-    slowaes
+    pyaes
     tlslite
     x11_hash
     mnemonic
+    jsonrpclib
 
     # plugins
     trezor
diff --git a/pkgs/applications/misc/electrum/default.nix b/pkgs/applications/misc/electrum/default.nix
index caa050581bf7..40fc10a56731 100644
--- a/pkgs/applications/misc/electrum/default.nix
+++ b/pkgs/applications/misc/electrum/default.nix
@@ -1,14 +1,23 @@
-{ stdenv, fetchurl, python3, python3Packages, zbar }:
+{ stdenv, fetchurl, python3, python3Packages, zbar, fetchpatch }:
 
 python3Packages.buildPythonApplication rec {
   name = "electrum-${version}";
-  version = "3.0.5";
+  version = "3.0.6";
 
   src = fetchurl {
     url = "https://download.electrum.org/${version}/Electrum-${version}.tar.gz";
-    sha256 = "06z0a5p1jg93jialphslip8d72q9yg3651qqaf494gs3h9kw1sv1";
+    sha256 = "01dnqiazjl2avrmdiq68absjvcfv24446y759z2s9dwk8ywzjkrg";
   };
 
+  patches = [
+    # Trezor compat patch should be included in electrum > 3.0.6
+    (fetchpatch {
+      name = "trezor-compat.patch";
+      url = "https://patch-diff.githubusercontent.com/raw/spesmilo/electrum/pull/3621.patch";
+      sha256 = "1bk1r2ikhnvw1fpfh71y4za2lnskcbkv50k8ynjxi5slx2wrfpl0";
+    })
+  ];
+
   propagatedBuildInputs = with python3Packages; [
     dnspython
     ecdsa
diff --git a/pkgs/applications/misc/gnuradio/wrapper.nix b/pkgs/applications/misc/gnuradio/wrapper.nix
index db2b453913f4..ffed3da03187 100644
--- a/pkgs/applications/misc/gnuradio/wrapper.nix
+++ b/pkgs/applications/misc/gnuradio/wrapper.nix
@@ -1,7 +1,6 @@
-{ stdenv, gnuradio, makeWrapper, python
-, extraPackages ? [] }:
+{ stdenv, gnuradio, makeWrapper, python, extraPackages ? [] }:
 
-with stdenv.lib;
+with { inherit (stdenv.lib) appendToName makeSearchPath; };
 
 stdenv.mkDerivation {
   name = (appendToName "with-packages" gnuradio).name;
@@ -11,13 +10,15 @@ stdenv.mkDerivation {
     mkdir -p $out/bin
     ln -s "${gnuradio}"/bin/* $out/bin/
 
-    for file in $(find $out/bin -type f -executable); do
-        wrapProgram "$file" \
-            --prefix PYTHONPATH : ${stdenv.lib.concatStringsSep ":"
-                                     (map (path: "$(toPythonPath ${path})") extraPackages)} \
-            --prefix GRC_BLOCKS_PATH : ${makeSearchPath "share/gnuradio/grc/blocks" extraPackages}
+    for file in $(find -L $out/bin -type f); do
+        if test -x "$(readlink -f "$file")"; then
+            wrapProgram "$file" \
+                --prefix PYTHONPATH : ${stdenv.lib.concatStringsSep ":"
+                                         (map (path: "$(toPythonPath ${path})") extraPackages)} \
+                --prefix GRC_BLOCKS_PATH : ${makeSearchPath "share/gnuradio/grc/blocks" extraPackages}
+        fi
     done
-
   '';
+
   inherit (gnuradio) meta;
 }
diff --git a/pkgs/applications/misc/haxor-news/default.nix b/pkgs/applications/misc/haxor-news/default.nix
index c82e5026ff18..b37a6ad732fe 100644
--- a/pkgs/applications/misc/haxor-news/default.nix
+++ b/pkgs/applications/misc/haxor-news/default.nix
@@ -20,6 +20,8 @@ buildPythonApplication rec {
     six
   ];
 
+  doCheck = false;
+
   checkInputs = [ mock ];
 
   checkPhase = ''
diff --git a/pkgs/applications/misc/hstr/default.nix b/pkgs/applications/misc/hstr/default.nix
index 3c4f409d18f1..6b62b418d786 100644
--- a/pkgs/applications/misc/hstr/default.nix
+++ b/pkgs/applications/misc/hstr/default.nix
@@ -1,15 +1,12 @@
 { stdenv, fetchurl, readline, ncurses }:
 
-let
-  version = "1.23";
-in
 stdenv.mkDerivation rec {
-
-  name = "hstr-${version}";
+  name    = "hstr-${version}";
+  version = "1.24";
 
   src = fetchurl {
     url = "https://github.com/dvorka/hstr/releases/download/${version}/hh-${version}-src.tgz";
-    sha256 = "1hnira256p7sdilx34mnkji7gi2jcl98zz4izqxsqmnzj8ghhzkv";
+    sha256 = "0w8is777fwq6r17zhl9xwrv9f7vanllzjiasx1pg6pxvppq7rh0x";
   };
 
   buildInputs = [ readline ncurses ];
diff --git a/pkgs/applications/misc/hugo/default.nix b/pkgs/applications/misc/hugo/default.nix
index 86b806a916c3..f984cb712c7a 100644
--- a/pkgs/applications/misc/hugo/default.nix
+++ b/pkgs/applications/misc/hugo/default.nix
@@ -2,23 +2,23 @@
 
 buildGoPackage rec {
   name = "hugo-${version}";
-  version = "0.32.2";
+  version = "0.36.1";
 
   goPackagePath = "github.com/gohugoio/hugo";
 
   src = fetchFromGitHub {
-    owner = "gohugoio";
-    repo = "hugo";
-    rev = "v${version}";
-    sha256 = "0k62sg9rvr4aqzh1r60m456cw8mj6kxjpri2nnj4c2dxmvll8qhr";
+    owner  = "gohugoio";
+    repo   = "hugo";
+    rev    = "v${version}";
+    sha256 = "179lzkd6f81rssgcwlngx2mhr9nvbj0rsh6yjbf1fsrpxfzr2q9z";
   };
 
   goDeps = ./deps.nix;
 
-  meta = {
+  meta = with stdenv.lib; {
     description = "A fast and modern static website engine.";
     homepage = https://gohugo.io;
-    maintainers = with stdenv.lib.maintainers; [ schneefux ];
-    license = stdenv.lib.licenses.asl20;
+    license = licenses.asl20;
+    maintainers = with maintainers; [ schneefux ];
   };
 }
diff --git a/pkgs/applications/misc/hugo/deps.nix b/pkgs/applications/misc/hugo/deps.nix
index 6c870833d1af..cf55ef4b64b2 100644
--- a/pkgs/applications/misc/hugo/deps.nix
+++ b/pkgs/applications/misc/hugo/deps.nix
@@ -32,8 +32,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/alecthomas/chroma";
-      rev = "c9f612c1940a4951cd2b55811744632a7b3b3bb2";
-      sha256 = "0s1mzb175s96adxfx5vhyazpzfq9j4dzx4sr4n8gj7r8afkqys8h";
+      rev = "df4ec264daccb2ecb17bde9134830100701199c5";
+      sha256 = "1snw7byfkfvvw0579jc0yxk79j1v1rb0jdcvivfsalh064zmjdvd";
     };
   }
   {
@@ -59,8 +59,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/cpuguy83/go-md2man";
-      rev = "8d868be6e9bf9d5350910bab97a050e49887600f";
-      sha256 = "0vy096wzkq1z59in1if486k0adaj1idvma0ax9z1igh9qpq53vd9";
+      rev = "48d8747a2ca13185e7cc8efe6e9fc196a83f71a5";
+      sha256 = "01hpll16rvxhnvv35vs3z8p51x54c5jyl1gjdm0g7kwfwp2chvjx";
     };
   }
   {
@@ -73,15 +73,6 @@
     };
   }
   {
-    goPackagePath = "github.com/dchest/cssmin";
-    fetch = {
-      type = "git";
-      url = "https://github.com/dchest/cssmin";
-      rev = "fb8d9b44afdc258bfff6052d3667521babcb2239";
-      sha256 = "09sdijfx5d05z4cd5k6lhl7k3kbpdf2amzlngv15h5v0fff9qw4s";
-    };
-  }
-  {
     goPackagePath = "github.com/disintegration/imaging";
     fetch = {
       type = "git";
@@ -113,8 +104,26 @@
     fetch = {
       type = "git";
       url = "https://github.com/fsnotify/fsnotify";
-      rev = "4da3e2cfbabc9f751898f250b49f2439785783a1";
-      sha256 = "1y2l9jaf99j6gidcfdgq3hifxyiwv4f7awpll80p170ixdbqxvl3";
+      rev = "c2828203cd70a50dcccfb2761f8b1f8ceef9a8e9";
+      sha256 = "07va9crci0ijlivbb7q57d2rz9h27zgn2fsm60spjsqpdbvyrx4g";
+    };
+  }
+  {
+    goPackagePath = "github.com/gobuffalo/envy";
+    fetch = {
+      type = "git";
+      url = "https://github.com/gobuffalo/envy";
+      rev = "50fabbbaf1e65fc9b739f37a00590c396485d84d";
+      sha256 = "0js2hggb1gybk28pk3hcsb1m6rswfdzvvr194z4my4za09ly5jax";
+    };
+  }
+  {
+    goPackagePath = "github.com/gobwas/glob";
+    fetch = {
+      type = "git";
+      url = "https://github.com/gobwas/glob";
+      rev = "19c076cdf202b3d1c0489bdfa2f2f289f634474b";
+      sha256 = "0176psz3m0pks0ka6pb62g7ccq5izzj0i7c0j20lb7dp3kawphxs";
     };
   }
   {
@@ -122,8 +131,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/gorilla/websocket";
-      rev = "d965e9adc66deebadcc7d0c6c7598e2a4baa7838";
-      sha256 = "0ka8pvby06farlji7pixlrk3zb962qp5xarvy2vxnfrdzlarv7xb";
+      rev = "f37d1588608ec036fa9b0b7b8afbde47dc06aea9";
+      sha256 = "1y0z7k4yi8aaw6yjm8s92hvbkyc51b5azpiywminjj1a84czvzvq";
     };
   }
   {
@@ -131,8 +140,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/hashicorp/go-immutable-radix";
-      rev = "8aac2701530899b64bdea735a1de8da899815220";
-      sha256 = "032w4pk4gd5lwwgnvhh52xnrgyp7lgmlxsfs47gnxkgkya1x7lw6";
+      rev = "7f3cd4390caab3250a57f30efdb2a65dd7649ecf";
+      sha256 = "13nv1dac6i2mjdy8vsd4vwawwja78vggdjcnj1xfykg2k8jbkphv";
     };
   }
   {
@@ -140,8 +149,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/hashicorp/golang-lru";
-      rev = "0a025b7e63adc15a622f29b0b2c4c3848243bbf6";
-      sha256 = "1iq7lbpsz7ks052mpznmkf8s4k43p51z4dik2n9ivrxk666q2wxi";
+      rev = "0fb14efe8c47ae851c0034ed7a448854d3d34cf3";
+      sha256 = "0vg4yn3088ym4sj1d34kr13lp4v5gya7r2nxshp2bz70n46fsqn2";
     };
   }
   {
@@ -163,12 +172,12 @@
     };
   }
   {
-    goPackagePath = "github.com/kardianos/osext";
+    goPackagePath = "github.com/joho/godotenv";
     fetch = {
       type = "git";
-      url = "https://github.com/kardianos/osext";
-      rev = "ae77be60afb1dcacde03767a8c37337fad28ac14";
-      sha256 = "056dkgxrqjj5r18bnc3knlpgdz5p3yvp12y4y978hnsfhwaqvbjz";
+      url = "https://github.com/joho/godotenv";
+      rev = "6bb08516677f8c8274c557fc801bee9ab564ab2c";
+      sha256 = "0jqczq5x5zwgs29vrmq87335c99gi5jrvxkwcpidz98yqg95db4f";
     };
   }
   {
@@ -185,8 +194,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/magiconair/properties";
-      rev = "49d762b9817ba1c2e9d0c69183c2b4a8b8f1d934";
-      sha256 = "0cnvcd4q88nvxk3q9617dcis2kng2xxsx3iivi5xs8azk290lpyy";
+      rev = "2c9e9502788518c97fe44e8955cd069417ee89df";
+      sha256 = "1w0rl9rla61m0qbha75jg48yiq1vs91sfy96rgqa6nags9v9b1rl";
     };
   }
   {
@@ -194,8 +203,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/markbates/inflect";
-      rev = "a12c3aec81a6a938bf584a4bac567afed9256586";
-      sha256 = "0mawr6z9nav4f5j0nmjdxg9lbfhr7wz8zi34g7b6wndmzyf8jbsd";
+      rev = "80fa1ea41b0dc859816314ab0b85f07a6bc57923";
+      sha256 = "0fmpfcz8g0qsb6h94yqpcms2bdb68qac706b54x0k1crfzl1d1mj";
     };
   }
   {
@@ -217,12 +226,30 @@
     };
   }
   {
+    goPackagePath = "github.com/mitchellh/go-homedir";
+    fetch = {
+      type = "git";
+      url = "https://github.com/mitchellh/go-homedir";
+      rev = "b8bc1bf767474819792c23f32d8286a45736f1c6";
+      sha256 = "13ry4lylalkh4g2vny9cxwvryslzyzwp9r92z0b10idhdq3wad1q";
+    };
+  }
+  {
     goPackagePath = "github.com/mitchellh/mapstructure";
     fetch = {
       type = "git";
       url = "https://github.com/mitchellh/mapstructure";
-      rev = "06020f85339e21b2478f756a78e295255ffa4d6a";
-      sha256 = "12zb5jh7ri4vna3f24y9g10nzrnz9wbvwnk29wjk3vg0ljia64s9";
+      rev = "00c29f56e2386353d58c599509e8dc3801b0d716";
+      sha256 = "1vw8fvhax0d567amgvxr7glcl12lvzg2sbzs007q5k5bbwn1szyb";
+    };
+  }
+  {
+    goPackagePath = "github.com/muesli/smartcrop";
+    fetch = {
+      type = "git";
+      url = "https://github.com/muesli/smartcrop";
+      rev = "c2a0373a193bac1daf8b6691e2ece069c5d7ac7f";
+      sha256 = "1jv68g9wddm2a1kf838anjnr4w17k7sqzz01h4z2lfashw3nanar";
     };
   }
   {
@@ -230,8 +257,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/nicksnyder/go-i18n";
-      rev = "aa0ce51472e0a9982717fd19cf02cb08b1e433aa";
-      sha256 = "0355fxpd69wnw56m6dak8k7rlw3q36bql8algg3jkjnxjpgfii4p";
+      rev = "ec04da47793482067e2e376d810e1622277368e4";
+      sha256 = "1c7ip5jidvssr8d4dbx9nchf99m13wblgaz630f7wm73y99dc3lr";
     };
   }
   {
@@ -239,8 +266,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/olekukonko/tablewriter";
-      rev = "65fec0d89a572b4367094e2058d3ebe667de3b60";
-      sha256 = "116waspmr33dqq3zxj2msnqp2f5v2b6ihk3rxqj7gz25rmcxh5wp";
+      rev = "b8a9be070da40449e501c3c4730a889e42d87a9e";
+      sha256 = "1z9frlk9avqhzjv6zz2rg7mvdhzcr9acdgagblijwwkx01f02hw7";
     };
   }
   {
@@ -248,8 +275,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/pelletier/go-toml";
-      rev = "0131db6d737cfbbfb678f8b7d92e55e27ce46224";
-      sha256 = "10sz1bh45346wdv8i3nffdmpfh8fb6xd0b3r474cs2mk961pw73v";
+      rev = "acdc4509485b587f5e675510c4f2c63e90ff68a8";
+      sha256 = "1y5m9pngxhsfzcnxh8ma5nsllx74wn0jr47p2n6i3inrjqxr12xh";
     };
   }
   {
@@ -257,8 +284,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/russross/blackfriday";
-      rev = "6d1ef893fcb01b4f50cb6e57ed7df3e2e627b6b2";
-      sha256 = "13p2xq5624b9j2f6j6j76j1h4l2lvmh7w6vcv2f5xsvzjy779r27";
+      rev = "55d61fa8aa702f59229e6cff85793c22e580eaf5";
+      sha256 = "0qmavm5d14kj6im6sqzpqnlhpy524428vkn4hnfwknndr9rycmn0";
     };
   }
   {
@@ -275,8 +302,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/spf13/afero";
-      rev = "57afd63c68602b63ed976de00dd066ccb3c319db";
-      sha256 = "0jf9v16m7k46j3mgw469yilhs5p3i32qvzi5954cqyigs6zzqbnk";
+      rev = "bbf41cb36dffe15dff5bf7e18c447801e7ffe163";
+      sha256 = "19jgsm6y1yp99h0fr77rhamdsn34r8545if7y9q377l3phrz2s0l";
     };
   }
   {
@@ -284,8 +311,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/spf13/cast";
-      rev = "acbeb36b902d72a7a4c18e8f3241075e7ab763e4";
-      sha256 = "0w25s6gjbbwv47b9208hysyqqphd6pib3d2phg24mjy4wigkm050";
+      rev = "8965335b8c7107321228e3e3702cab9832751bac";
+      sha256 = "177bk7lq40jbgv9p9r80aydpaccfk8ja3a7jjhfwiwk9r1pa4rr2";
     };
   }
   {
@@ -293,8 +320,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/spf13/cobra";
-      rev = "ccaecb155a2177302cb56cae929251a256d0f646";
-      sha256 = "1zm89akryx6x0vzvn50736z732gdm3jsx5898annr0zr1cfpf443";
+      rev = "be77323fc05148ef091e83b3866c0d47c8e74a8b";
+      sha256 = "0kl0psbdg8cyznwvq13sva6r4ggmhwzfxdjmkl2vqhy83xq3a6yn";
     };
   }
   {
@@ -311,8 +338,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/spf13/jwalterweatherman";
-      rev = "12bd96e66386c1960ab0f74ced1362f66f552f7b";
-      sha256 = "1abvqd1dl3m7mxv44wvl0vwd50l6qpndzrxk28vyb77x41rc8b2g";
+      rev = "7c0cea34c8ece3fbeb2b27ab9b59511d360fb394";
+      sha256 = "132p84i20b9s5r6fs597lsa6648vd415ch7c0d018vm8smzqpd0h";
     };
   }
   {
@@ -329,8 +356,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/spf13/pflag";
-      rev = "4c012f6dcd9546820e378d0bdda4d8fc772cdfea";
-      sha256 = "0plmm67lkm25ir0lczwh7hmanyilrs1vxmbp8a0dyr282ji1dqm5";
+      rev = "ee5fd03fd6acfd43e44aea0b4135958546ed8e73";
+      sha256 = "1fgb1ph3vrqcpdvypp3c1fwj15r587l9yvv5wqcq08shln5rbsnk";
     };
   }
   {
@@ -365,8 +392,8 @@
     fetch = {
       type = "git";
       url = "https://go.googlesource.com/net";
-      rev = "d866cfc389cec985d6fda2859936a575a55a3ab6";
-      sha256 = "10iahqcsiih5hgmqw8yfgv5b3fimfwl1skxg5062avcjjks59f03";
+      rev = "cbe0f9307d0156177f9dd5dc85da1a31abc5f2fb";
+      sha256 = "1hmpqkxh97ayyy0xcdvf1bwirwja4wyin3sh0fzjlh93aqmqgylf";
     };
   }
   {
@@ -383,8 +410,8 @@
     fetch = {
       type = "git";
       url = "https://go.googlesource.com/sys";
-      rev = "83801418e1b59fb1880e363299581ee543af32ca";
-      sha256 = "0ilykaanvnzb27d42kmbr4i37hcn7hgqbx98z945gy63aa8dskji";
+      rev = "37707fdb30a5b38865cfb95e5aab41707daec7fd";
+      sha256 = "1abrr2507a737hdqv4q7pw7hv6ls9pdiq9crhdi52r3gcz6hvizg";
     };
   }
   {
@@ -392,8 +419,8 @@
     fetch = {
       type = "git";
       url = "https://go.googlesource.com/text";
-      rev = "e19ae1496984b1c655b8044a65c0300a3c878dd3";
-      sha256 = "1cvnnx8nwx5c7gr6ajs7sldhbqh52n7h6fsa3i21l2lhx6xrsh4w";
+      rev = "9e2b64d659da1afe07ce1c9c1dfefc09d188f21e";
+      sha256 = "00ichxdybvs76gj805j828qxg7x4h4v64pq1s56ydaw07ja6lmry";
     };
   }
   {
@@ -401,8 +428,8 @@
     fetch = {
       type = "git";
       url = "https://gopkg.in/yaml.v2";
-      rev = "287cf08546ab5e7e37d55a84f7ed3fd1db036de5";
-      sha256 = "15502klds9wwv567vclb9kx95gs8lnyzn4ybsk6l9fc7a67lk831";
+      rev = "d670f9405373e636a5a2765eea47fac0c9bc91a4";
+      sha256 = "1w1xid51n8v1mydn2m3vgggw8qgpd5a5sr62snsc77d99fpjsrs0";
     };
   }
 ]
diff --git a/pkgs/applications/misc/jekyll/Gemfile b/pkgs/applications/misc/jekyll/Gemfile
deleted file mode 100644
index 97ebb9705bd6..000000000000
--- a/pkgs/applications/misc/jekyll/Gemfile
+++ /dev/null
@@ -1,7 +0,0 @@
-source 'https://rubygems.org'
-gem 'jekyll'
-gem 'jekyll-feed'
-gem 'jekyll-paginate'
-gem 'rdiscount'
-gem 'RedCloth'
-gem 'minima'
diff --git a/pkgs/applications/misc/jekyll/Gemfile.lock b/pkgs/applications/misc/jekyll/Gemfile.lock
deleted file mode 100644
index da4be83382fb..000000000000
--- a/pkgs/applications/misc/jekyll/Gemfile.lock
+++ /dev/null
@@ -1,59 +0,0 @@
-GEM
-  remote: https://rubygems.org/
-  specs:
-    RedCloth (4.3.2)
-    addressable (2.5.0)
-      public_suffix (~> 2.0, >= 2.0.2)
-    colorator (1.1.0)
-    ffi (1.9.18)
-    forwardable-extended (2.6.0)
-    jekyll (3.4.1)
-      addressable (~> 2.4)
-      colorator (~> 1.0)
-      jekyll-sass-converter (~> 1.0)
-      jekyll-watch (~> 1.1)
-      kramdown (~> 1.3)
-      liquid (~> 3.0)
-      mercenary (~> 0.3.3)
-      pathutil (~> 0.9)
-      rouge (~> 1.7)
-      safe_yaml (~> 1.0)
-    jekyll-feed (0.9.1)
-      jekyll (~> 3.3)
-    jekyll-paginate (1.1.0)
-    jekyll-sass-converter (1.5.0)
-      sass (~> 3.4)
-    jekyll-watch (1.5.0)
-      listen (~> 3.0, < 3.1)
-    kramdown (1.13.2)
-    liquid (3.0.6)
-    listen (3.0.8)
-      rb-fsevent (~> 0.9, >= 0.9.4)
-      rb-inotify (~> 0.9, >= 0.9.7)
-    mercenary (0.3.6)
-    minima (2.1.0)
-      jekyll (~> 3.3)
-    pathutil (0.14.0)
-      forwardable-extended (~> 2.6)
-    public_suffix (2.0.5)
-    rb-fsevent (0.9.8)
-    rb-inotify (0.9.8)
-      ffi (>= 0.5.0)
-    rdiscount (2.2.0.1)
-    rouge (1.11.1)
-    safe_yaml (1.0.4)
-    sass (3.4.23)
-
-PLATFORMS
-  ruby
-
-DEPENDENCIES
-  RedCloth
-  jekyll
-  jekyll-feed
-  jekyll-paginate
-  minima
-  rdiscount
-
-BUNDLED WITH
-   1.14.4
diff --git a/pkgs/applications/misc/jekyll/basic/Gemfile b/pkgs/applications/misc/jekyll/basic/Gemfile
new file mode 100644
index 000000000000..2d3446a81134
--- /dev/null
+++ b/pkgs/applications/misc/jekyll/basic/Gemfile
@@ -0,0 +1,10 @@
+source "https://rubygems.org"
+gem "jekyll"
+# jekyll alone might be enough for most use-cases
+gem "rouge"
+gem "activesupport", "~> 4.2"
+gem "jekyll-avatar"
+gem "jekyll-mentions"
+gem "jekyll-seo-tag"
+gem "jekyll-sitemap"
+gem "jemoji"
diff --git a/pkgs/applications/misc/jekyll/basic/Gemfile.lock b/pkgs/applications/misc/jekyll/basic/Gemfile.lock
new file mode 100644
index 000000000000..972403a47544
--- /dev/null
+++ b/pkgs/applications/misc/jekyll/basic/Gemfile.lock
@@ -0,0 +1,101 @@
+GEM
+  remote: https://rubygems.org/
+  specs:
+    activesupport (4.2.10)
+      i18n (~> 0.7)
+      minitest (~> 5.1)
+      thread_safe (~> 0.3, >= 0.3.4)
+      tzinfo (~> 1.1)
+    addressable (2.5.2)
+      public_suffix (>= 2.0.2, < 4.0)
+    colorator (1.1.0)
+    concurrent-ruby (1.0.5)
+    em-websocket (0.5.1)
+      eventmachine (>= 0.12.9)
+      http_parser.rb (~> 0.6.0)
+    eventmachine (1.2.5)
+    ffi (1.9.21)
+    forwardable-extended (2.6.0)
+    gemoji (3.0.0)
+    html-pipeline (2.7.1)
+      activesupport (>= 2)
+      nokogiri (>= 1.4)
+    http_parser.rb (0.6.0)
+    i18n (0.9.5)
+      concurrent-ruby (~> 1.0)
+    jekyll (3.7.2)
+      addressable (~> 2.4)
+      colorator (~> 1.0)
+      em-websocket (~> 0.5)
+      i18n (~> 0.7)
+      jekyll-sass-converter (~> 1.0)
+      jekyll-watch (~> 2.0)
+      kramdown (~> 1.14)
+      liquid (~> 4.0)
+      mercenary (~> 0.3.3)
+      pathutil (~> 0.9)
+      rouge (>= 1.7, < 4)
+      safe_yaml (~> 1.0)
+    jekyll-avatar (0.5.0)
+      jekyll (~> 3.0)
+    jekyll-mentions (1.2.0)
+      activesupport (~> 4.0)
+      html-pipeline (~> 2.3)
+      jekyll (~> 3.0)
+    jekyll-sass-converter (1.5.2)
+      sass (~> 3.4)
+    jekyll-seo-tag (2.4.0)
+      jekyll (~> 3.3)
+    jekyll-sitemap (1.2.0)
+      jekyll (~> 3.3)
+    jekyll-watch (2.0.0)
+      listen (~> 3.0)
+    jemoji (0.9.0)
+      activesupport (~> 4.0, >= 4.2.9)
+      gemoji (~> 3.0)
+      html-pipeline (~> 2.2)
+      jekyll (~> 3.0)
+    kramdown (1.16.2)
+    liquid (4.0.0)
+    listen (3.1.5)
+      rb-fsevent (~> 0.9, >= 0.9.4)
+      rb-inotify (~> 0.9, >= 0.9.7)
+      ruby_dep (~> 1.2)
+    mercenary (0.3.6)
+    mini_portile2 (2.3.0)
+    minitest (5.11.3)
+    nokogiri (1.8.2)
+      mini_portile2 (~> 2.3.0)
+    pathutil (0.16.1)
+      forwardable-extended (~> 2.6)
+    public_suffix (3.0.2)
+    rb-fsevent (0.10.2)
+    rb-inotify (0.9.10)
+      ffi (>= 0.5.0, < 2)
+    rouge (3.1.1)
+    ruby_dep (1.5.0)
+    safe_yaml (1.0.4)
+    sass (3.5.5)
+      sass-listen (~> 4.0.0)
+    sass-listen (4.0.0)
+      rb-fsevent (~> 0.9, >= 0.9.4)
+      rb-inotify (~> 0.9, >= 0.9.7)
+    thread_safe (0.3.6)
+    tzinfo (1.2.5)
+      thread_safe (~> 0.1)
+
+PLATFORMS
+  ruby
+
+DEPENDENCIES
+  activesupport (~> 4.2)
+  jekyll
+  jekyll-avatar
+  jekyll-mentions
+  jekyll-seo-tag
+  jekyll-sitemap
+  jemoji
+  rouge
+
+BUNDLED WITH
+   1.14.6
diff --git a/pkgs/applications/misc/jekyll/basic/gemset.nix b/pkgs/applications/misc/jekyll/basic/gemset.nix
new file mode 100644
index 000000000000..32e90b07a263
--- /dev/null
+++ b/pkgs/applications/misc/jekyll/basic/gemset.nix
@@ -0,0 +1,326 @@
+{
+  activesupport = {
+    dependencies = ["i18n" "minitest" "thread_safe" "tzinfo"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0s12j8vl8vrxfngkdlz9g8bpz9akq1z42d57mx5r537b2pji8nr7";
+      type = "gem";
+    };
+    version = "4.2.10";
+  };
+  addressable = {
+    dependencies = ["public_suffix"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0viqszpkggqi8hq87pqp0xykhvz60g99nwmkwsb0v45kc2liwxvk";
+      type = "gem";
+    };
+    version = "2.5.2";
+  };
+  colorator = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0f7wvpam948cglrciyqd798gdc6z3cfijciavd0dfixgaypmvy72";
+      type = "gem";
+    };
+    version = "1.1.0";
+  };
+  concurrent-ruby = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "183lszf5gx84kcpb779v6a2y0mx9sssy8dgppng1z9a505nj1qcf";
+      type = "gem";
+    };
+    version = "1.0.5";
+  };
+  em-websocket = {
+    dependencies = ["eventmachine" "http_parser.rb"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1bsw8vjz0z267j40nhbmrvfz7dvacq4p0pagvyp17jif6mj6v7n3";
+      type = "gem";
+    };
+    version = "0.5.1";
+  };
+  eventmachine = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "075hdw0fgzldgss3xaqm2dk545736khcvv1fmzbf1sgdlkyh1v8z";
+      type = "gem";
+    };
+    version = "1.2.5";
+  };
+  ffi = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0c2dl10pi6a30kcvx2s6p2v1wb4kbm48iv38kmz2ff600nirhpb8";
+      type = "gem";
+    };
+    version = "1.9.21";
+  };
+  forwardable-extended = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "15zcqfxfvsnprwm8agia85x64vjzr2w0xn9vxfnxzgcv8s699v0v";
+      type = "gem";
+    };
+    version = "2.6.0";
+  };
+  gemoji = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1h85qpn2xbmsn8ssf2fqzlqg181j000m5z4l3g26r7vblncg162d";
+      type = "gem";
+    };
+    version = "3.0.0";
+  };
+  html-pipeline = {
+    dependencies = ["activesupport" "nokogiri"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0hkx70z9ijgnncmrna9qdh9ajn9m7v146k91j257lrzyq2f6jdjd";
+      type = "gem";
+    };
+    version = "2.7.1";
+  };
+  "http_parser.rb" = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "15nidriy0v5yqfjsgsra51wmknxci2n2grliz78sf9pga3n0l7gi";
+      type = "gem";
+    };
+    version = "0.6.0";
+  };
+  i18n = {
+    dependencies = ["concurrent-ruby"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "038qvz7kd3cfxk8bvagqhakx68pfbnmghpdkx7573wbf0maqp9a3";
+      type = "gem";
+    };
+    version = "0.9.5";
+  };
+  jekyll = {
+    dependencies = ["addressable" "colorator" "em-websocket" "i18n" "jekyll-sass-converter" "jekyll-watch" "kramdown" "liquid" "mercenary" "pathutil" "rouge" "safe_yaml"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "05f61rqwz1isci7by34zyz38ah2rv5b8i5h618cxcl97hwqps8n2";
+      type = "gem";
+    };
+    version = "3.7.2";
+  };
+  jekyll-avatar = {
+    dependencies = ["jekyll"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0y2w7pnahkm3ddxrq589wv1w53ay7p1pvfs6khcmh6wq85r6wpsf";
+      type = "gem";
+    };
+    version = "0.5.0";
+  };
+  jekyll-mentions = {
+    dependencies = ["activesupport" "html-pipeline" "jekyll"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "00nqm1ng4iiibmv4vx0ayzq7fqm2sm1af98r4ykvld6asqj5qkyd";
+      type = "gem";
+    };
+    version = "1.2.0";
+  };
+  jekyll-sass-converter = {
+    dependencies = ["sass"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "008ikh5fk0n6ri54mylcl8jn0mq8p2nfyfqif2q3pp0lwilkcxsk";
+      type = "gem";
+    };
+    version = "1.5.2";
+  };
+  jekyll-seo-tag = {
+    dependencies = ["jekyll"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0f9b2mvmx57zj49afb3x8cmzdmb1kh4rbpbv3v7w5bh47g2c9big";
+      type = "gem";
+    };
+    version = "2.4.0";
+  };
+  jekyll-sitemap = {
+    dependencies = ["jekyll"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0xy93ysl1q8r4xhbnffycvsslja0dskh2z2pl1jnykwsy27dc89n";
+      type = "gem";
+    };
+    version = "1.2.0";
+  };
+  jekyll-watch = {
+    dependencies = ["listen"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0m7scvj3ki8bmyx5v8pzibpg6my10nycnc28lip98dskf8iakprp";
+      type = "gem";
+    };
+    version = "2.0.0";
+  };
+  jemoji = {
+    dependencies = ["activesupport" "gemoji" "html-pipeline" "jekyll"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0acmi7mgr844dmzgfi9flcqkkb0jh5l21h579cidxwf1409w588b";
+      type = "gem";
+    };
+    version = "0.9.0";
+  };
+  kramdown = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0mkrqpp01rrfn3rx6wwsjizyqmafp0vgg8ja1dvbjs185r5zw3za";
+      type = "gem";
+    };
+    version = "1.16.2";
+  };
+  liquid = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "17fa0jgwm9a935fyvzy8bysz7j5n1vf1x2wzqkdfd5k08dbw3x2y";
+      type = "gem";
+    };
+    version = "4.0.0";
+  };
+  listen = {
+    dependencies = ["rb-fsevent" "rb-inotify" "ruby_dep"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "01v5mrnfqm6sgm8xn2v5swxsn1wlmq7rzh2i48d4jzjsc7qvb6mx";
+      type = "gem";
+    };
+    version = "3.1.5";
+  };
+  mercenary = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "10la0xw82dh5mqab8bl0dk21zld63cqxb1g16fk8cb39ylc4n21a";
+      type = "gem";
+    };
+    version = "0.3.6";
+  };
+  mini_portile2 = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "13d32jjadpjj6d2wdhkfpsmy68zjx90p49bgf8f7nkpz86r1fr11";
+      type = "gem";
+    };
+    version = "2.3.0";
+  };
+  minitest = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0icglrhghgwdlnzzp4jf76b0mbc71s80njn5afyfjn4wqji8mqbq";
+      type = "gem";
+    };
+    version = "5.11.3";
+  };
+  nokogiri = {
+    dependencies = ["mini_portile2"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "05fm3xh462glvs0rwnfmc1spmgl4ljg2giifynbmwwqvl42zaaiq";
+      type = "gem";
+    };
+    version = "1.8.2";
+  };
+  pathutil = {
+    dependencies = ["forwardable-extended"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0wc18ms1rzi44lpjychyw2a96jcmgxqdvy2949r4vvb5f4p0lgvz";
+      type = "gem";
+    };
+    version = "0.16.1";
+  };
+  public_suffix = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1x5h1dh1i3gwc01jbg01rly2g6a1qwhynb1s8a30ic507z1nh09s";
+      type = "gem";
+    };
+    version = "3.0.2";
+  };
+  rb-fsevent = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1fbpmjypwxkb8r7y1kmhmyp6gawa4byw0yb3jc3dn9ly4ld9lizf";
+      type = "gem";
+    };
+    version = "0.10.2";
+  };
+  rb-inotify = {
+    dependencies = ["ffi"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0yfsgw5n7pkpyky6a9wkf1g9jafxb0ja7gz0qw0y14fd2jnzfh71";
+      type = "gem";
+    };
+    version = "0.9.10";
+  };
+  rouge = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1sfhy0xxqjnzqa7qxmpz1bmy0mzcr55qyvi410gsb6d6i4ialbw3";
+      type = "gem";
+    };
+    version = "3.1.1";
+  };
+  ruby_dep = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1c1bkl97i9mkcvkn1jks346ksnvnnp84cs22gwl0vd7radybrgy5";
+      type = "gem";
+    };
+    version = "1.5.0";
+  };
+  safe_yaml = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1hly915584hyi9q9vgd968x2nsi5yag9jyf5kq60lwzi5scr7094";
+      type = "gem";
+    };
+    version = "1.0.4";
+  };
+  sass = {
+    dependencies = ["sass-listen"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "10401m2xlv6vaxfwzy4xxmk51ddcnkvwi918cw3jkki0qqdl7d8v";
+      type = "gem";
+    };
+    version = "3.5.5";
+  };
+  sass-listen = {
+    dependencies = ["rb-fsevent" "rb-inotify"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0xw3q46cmahkgyldid5hwyiwacp590zj2vmswlll68ryvmvcp7df";
+      type = "gem";
+    };
+    version = "4.0.0";
+  };
+  thread_safe = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0nmhcgq6cgz44srylra07bmaw99f5271l0dpsvl5f75m44l0gmwy";
+      type = "gem";
+    };
+    version = "0.3.6";
+  };
+  tzinfo = {
+    dependencies = ["thread_safe"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1fjx9j327xpkkdlxwmkl3a8wqj7i4l4jwlrv3z13mg95z9wl253z";
+      type = "gem";
+    };
+    version = "1.2.5";
+  };
+}
\ No newline at end of file
diff --git a/pkgs/applications/misc/jekyll/default.nix b/pkgs/applications/misc/jekyll/default.nix
index ad8b7b262e55..418b4ea466ea 100644
--- a/pkgs/applications/misc/jekyll/default.nix
+++ b/pkgs/applications/misc/jekyll/default.nix
@@ -1,19 +1,34 @@
-{ stdenv, lib, bundlerEnv, ruby }:
+{ lib, bundlerEnv, ruby
+, withOptionalDependencies ? false
+}:
 
 bundlerEnv rec {
-  name = "jekyll-${version}";
+  name = pname + "-" + version;
+  pname = "jekyll";
+  version = (import
+    (if withOptionalDependencies
+      then ./full/gemset.nix
+      else ./basic/gemset.nix))
+    .jekyll.version;
 
-  version = (import gemset).jekyll.version;
   inherit ruby;
-  gemfile = ./Gemfile;
-  lockfile = ./Gemfile.lock;
-  gemset = ./gemset.nix;
+  gemdir = if withOptionalDependencies
+    then ./full
+    else ./basic;
 
   meta = with lib; {
-    description = "Simple, blog aware, static site generator";
-    homepage    =  https://jekyllrb.com/;
+    description = "A blog-aware, static site generator, written in Ruby";
+    longDescription = ''
+      Jekyll is a simple, blog-aware, static site generator, written in Ruby.
+      Think of it like a file-based CMS, without all the complexity. Jekyll
+      takes your content, renders Markdown and Liquid templates, and spits out a
+      complete, static website ready to be served by Apache, Nginx or another
+      web server. Jekyll is the engine behind GitHub Pages, which you can use to
+      host sites right from your GitHub repositories.
+    '';
+    homepage    = https://jekyllrb.com/;
     license     = licenses.mit;
-    maintainers = with maintainers; [ pesterhazy ];
+    maintainers = with maintainers; [ primeos pesterhazy ];
     platforms   = platforms.unix;
   };
 }
diff --git a/pkgs/applications/misc/jekyll/full/Gemfile b/pkgs/applications/misc/jekyll/full/Gemfile
new file mode 100644
index 000000000000..41f33c6e9ea7
--- /dev/null
+++ b/pkgs/applications/misc/jekyll/full/Gemfile
@@ -0,0 +1,30 @@
+source "https://rubygems.org"
+gem "jekyll"
+gem "rouge"
+gem "activesupport", "~> 4.2"
+gem "jekyll-avatar"
+gem "jekyll-mentions"
+gem "jekyll-seo-tag"
+gem "jekyll-sitemap"
+gem "jemoji"
+# Optional dependencies:
+gem "coderay", "~> 1.1.0"
+gem "jekyll-coffeescript"
+gem "jekyll-docs"
+gem "jekyll-feed", "~> 0.9"
+gem "jekyll-gist"
+gem "jekyll-paginate"
+gem "jekyll-redirect-from"
+gem "kramdown", "~> 1.14"
+gem "mime-types", "~> 3.0"
+gem "rdoc", RUBY_VERSION >= "2.2.2" ? "~> 6.0" : "~> 5.1"
+gem "tomlrb", "~> 1.2"
+
+platform :ruby, :mswin, :mingw, :x64_mingw do
+  gem "classifier-reborn", "~> 2.2.0"
+  gem "liquid-c", "~> 3.0"
+  gem "pygments.rb", "~> 1.0"
+  gem "rdiscount", "~> 2.0"
+  gem "redcarpet", "~> 3.2", ">= 3.2.3"
+  gem "yajl-ruby", "~> 1.3.1"
+end
diff --git a/pkgs/applications/misc/jekyll/full/Gemfile.lock b/pkgs/applications/misc/jekyll/full/Gemfile.lock
new file mode 100644
index 000000000000..d070ad66f65c
--- /dev/null
+++ b/pkgs/applications/misc/jekyll/full/Gemfile.lock
@@ -0,0 +1,160 @@
+GEM
+  remote: https://rubygems.org/
+  specs:
+    activesupport (4.2.10)
+      i18n (~> 0.7)
+      minitest (~> 5.1)
+      thread_safe (~> 0.3, >= 0.3.4)
+      tzinfo (~> 1.1)
+    addressable (2.5.2)
+      public_suffix (>= 2.0.2, < 4.0)
+    classifier-reborn (2.2.0)
+      fast-stemmer (~> 1.0)
+    coderay (1.1.2)
+    coffee-script (2.4.1)
+      coffee-script-source
+      execjs
+    coffee-script-source (1.11.1)
+    colorator (1.1.0)
+    concurrent-ruby (1.0.5)
+    em-websocket (0.5.1)
+      eventmachine (>= 0.12.9)
+      http_parser.rb (~> 0.6.0)
+    eventmachine (1.2.5)
+    execjs (2.7.0)
+    faraday (0.14.0)
+      multipart-post (>= 1.2, < 3)
+    fast-stemmer (1.0.2)
+    ffi (1.9.21)
+    forwardable-extended (2.6.0)
+    gemoji (3.0.0)
+    html-pipeline (2.7.1)
+      activesupport (>= 2)
+      nokogiri (>= 1.4)
+    http_parser.rb (0.6.0)
+    i18n (0.9.5)
+      concurrent-ruby (~> 1.0)
+    jekyll (3.7.2)
+      addressable (~> 2.4)
+      colorator (~> 1.0)
+      em-websocket (~> 0.5)
+      i18n (~> 0.7)
+      jekyll-sass-converter (~> 1.0)
+      jekyll-watch (~> 2.0)
+      kramdown (~> 1.14)
+      liquid (~> 4.0)
+      mercenary (~> 0.3.3)
+      pathutil (~> 0.9)
+      rouge (>= 1.7, < 4)
+      safe_yaml (~> 1.0)
+    jekyll-avatar (0.5.0)
+      jekyll (~> 3.0)
+    jekyll-coffeescript (1.1.1)
+      coffee-script (~> 2.2)
+      coffee-script-source (~> 1.11.1)
+    jekyll-docs (3.7.2)
+      jekyll (= 3.7.2)
+    jekyll-feed (0.9.3)
+      jekyll (~> 3.3)
+    jekyll-gist (1.5.0)
+      octokit (~> 4.2)
+    jekyll-mentions (1.2.0)
+      activesupport (~> 4.0)
+      html-pipeline (~> 2.3)
+      jekyll (~> 3.0)
+    jekyll-paginate (1.1.0)
+    jekyll-redirect-from (0.13.0)
+      jekyll (~> 3.3)
+    jekyll-sass-converter (1.5.2)
+      sass (~> 3.4)
+    jekyll-seo-tag (2.4.0)
+      jekyll (~> 3.3)
+    jekyll-sitemap (1.2.0)
+      jekyll (~> 3.3)
+    jekyll-watch (2.0.0)
+      listen (~> 3.0)
+    jemoji (0.9.0)
+      activesupport (~> 4.0, >= 4.2.9)
+      gemoji (~> 3.0)
+      html-pipeline (~> 2.2)
+      jekyll (~> 3.0)
+    kramdown (1.16.2)
+    liquid (4.0.0)
+    liquid-c (3.0.0)
+      liquid (>= 3.0.0)
+    listen (3.1.5)
+      rb-fsevent (~> 0.9, >= 0.9.4)
+      rb-inotify (~> 0.9, >= 0.9.7)
+      ruby_dep (~> 1.2)
+    mercenary (0.3.6)
+    mime-types (3.1)
+      mime-types-data (~> 3.2015)
+    mime-types-data (3.2016.0521)
+    mini_portile2 (2.3.0)
+    minitest (5.11.3)
+    multi_json (1.13.1)
+    multipart-post (2.0.0)
+    nokogiri (1.8.2)
+      mini_portile2 (~> 2.3.0)
+    octokit (4.8.0)
+      sawyer (~> 0.8.0, >= 0.5.3)
+    pathutil (0.16.1)
+      forwardable-extended (~> 2.6)
+    public_suffix (3.0.2)
+    pygments.rb (1.2.1)
+      multi_json (>= 1.0.0)
+    rb-fsevent (0.10.2)
+    rb-inotify (0.9.10)
+      ffi (>= 0.5.0, < 2)
+    rdiscount (2.2.0.1)
+    rdoc (6.0.1)
+    redcarpet (3.4.0)
+    rouge (3.1.1)
+    ruby_dep (1.5.0)
+    safe_yaml (1.0.4)
+    sass (3.5.5)
+      sass-listen (~> 4.0.0)
+    sass-listen (4.0.0)
+      rb-fsevent (~> 0.9, >= 0.9.4)
+      rb-inotify (~> 0.9, >= 0.9.7)
+    sawyer (0.8.1)
+      addressable (>= 2.3.5, < 2.6)
+      faraday (~> 0.8, < 1.0)
+    thread_safe (0.3.6)
+    tomlrb (1.2.6)
+    tzinfo (1.2.5)
+      thread_safe (~> 0.1)
+    yajl-ruby (1.3.1)
+
+PLATFORMS
+  ruby
+
+DEPENDENCIES
+  activesupport (~> 4.2)
+  classifier-reborn (~> 2.2.0)
+  coderay (~> 1.1.0)
+  jekyll
+  jekyll-avatar
+  jekyll-coffeescript
+  jekyll-docs
+  jekyll-feed (~> 0.9)
+  jekyll-gist
+  jekyll-mentions
+  jekyll-paginate
+  jekyll-redirect-from
+  jekyll-seo-tag
+  jekyll-sitemap
+  jemoji
+  kramdown (~> 1.14)
+  liquid-c (~> 3.0)
+  mime-types (~> 3.0)
+  pygments.rb (~> 1.0)
+  rdiscount (~> 2.0)
+  rdoc (~> 6.0)
+  redcarpet (~> 3.2, >= 3.2.3)
+  rouge
+  tomlrb (~> 1.2)
+  yajl-ruby (~> 1.3.1)
+
+BUNDLED WITH
+   1.14.6
diff --git a/pkgs/applications/misc/jekyll/full/gemset.nix b/pkgs/applications/misc/jekyll/full/gemset.nix
new file mode 100644
index 000000000000..f41acb661910
--- /dev/null
+++ b/pkgs/applications/misc/jekyll/full/gemset.nix
@@ -0,0 +1,547 @@
+{
+  activesupport = {
+    dependencies = ["i18n" "minitest" "thread_safe" "tzinfo"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0s12j8vl8vrxfngkdlz9g8bpz9akq1z42d57mx5r537b2pji8nr7";
+      type = "gem";
+    };
+    version = "4.2.10";
+  };
+  addressable = {
+    dependencies = ["public_suffix"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0viqszpkggqi8hq87pqp0xykhvz60g99nwmkwsb0v45kc2liwxvk";
+      type = "gem";
+    };
+    version = "2.5.2";
+  };
+  classifier-reborn = {
+    dependencies = ["fast-stemmer"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "04nxmm5b7j7r0ij9pcpdr7xqpig559gfzrw042ycxcfyav2pv6ij";
+      type = "gem";
+    };
+    version = "2.2.0";
+  };
+  coderay = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "15vav4bhcc2x3jmi3izb11l4d9f3xv8hp2fszb7iqmpsccv1pz4y";
+      type = "gem";
+    };
+    version = "1.1.2";
+  };
+  coffee-script = {
+    dependencies = ["coffee-script-source" "execjs"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0rc7scyk7mnpfxqv5yy4y5q1hx3i7q3ahplcp4bq2g5r24g2izl2";
+      type = "gem";
+    };
+    version = "2.4.1";
+  };
+  coffee-script-source = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0xfshhlz808f8639wc88wgls1mww35sid8rd55vn0a4yqajf4vh9";
+      type = "gem";
+    };
+    version = "1.11.1";
+  };
+  colorator = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0f7wvpam948cglrciyqd798gdc6z3cfijciavd0dfixgaypmvy72";
+      type = "gem";
+    };
+    version = "1.1.0";
+  };
+  concurrent-ruby = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "183lszf5gx84kcpb779v6a2y0mx9sssy8dgppng1z9a505nj1qcf";
+      type = "gem";
+    };
+    version = "1.0.5";
+  };
+  em-websocket = {
+    dependencies = ["eventmachine" "http_parser.rb"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1bsw8vjz0z267j40nhbmrvfz7dvacq4p0pagvyp17jif6mj6v7n3";
+      type = "gem";
+    };
+    version = "0.5.1";
+  };
+  eventmachine = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "075hdw0fgzldgss3xaqm2dk545736khcvv1fmzbf1sgdlkyh1v8z";
+      type = "gem";
+    };
+    version = "1.2.5";
+  };
+  execjs = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1yz55sf2nd3l666ms6xr18sm2aggcvmb8qr3v53lr4rir32y1yp1";
+      type = "gem";
+    };
+    version = "2.7.0";
+  };
+  faraday = {
+    dependencies = ["multipart-post"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1c3x3s8vb5nf7inyfvhdxwa4q3swmnacpxby6pish5fgmhws7zrr";
+      type = "gem";
+    };
+    version = "0.14.0";
+  };
+  fast-stemmer = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0688clyk4xxh3kdb18vi089k90mca8ji5fwaknh3da5wrzcrzanh";
+      type = "gem";
+    };
+    version = "1.0.2";
+  };
+  ffi = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0c2dl10pi6a30kcvx2s6p2v1wb4kbm48iv38kmz2ff600nirhpb8";
+      type = "gem";
+    };
+    version = "1.9.21";
+  };
+  forwardable-extended = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "15zcqfxfvsnprwm8agia85x64vjzr2w0xn9vxfnxzgcv8s699v0v";
+      type = "gem";
+    };
+    version = "2.6.0";
+  };
+  gemoji = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1h85qpn2xbmsn8ssf2fqzlqg181j000m5z4l3g26r7vblncg162d";
+      type = "gem";
+    };
+    version = "3.0.0";
+  };
+  html-pipeline = {
+    dependencies = ["activesupport" "nokogiri"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0hkx70z9ijgnncmrna9qdh9ajn9m7v146k91j257lrzyq2f6jdjd";
+      type = "gem";
+    };
+    version = "2.7.1";
+  };
+  "http_parser.rb" = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "15nidriy0v5yqfjsgsra51wmknxci2n2grliz78sf9pga3n0l7gi";
+      type = "gem";
+    };
+    version = "0.6.0";
+  };
+  i18n = {
+    dependencies = ["concurrent-ruby"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "038qvz7kd3cfxk8bvagqhakx68pfbnmghpdkx7573wbf0maqp9a3";
+      type = "gem";
+    };
+    version = "0.9.5";
+  };
+  jekyll = {
+    dependencies = ["addressable" "colorator" "em-websocket" "i18n" "jekyll-sass-converter" "jekyll-watch" "kramdown" "liquid" "mercenary" "pathutil" "rouge" "safe_yaml"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "05f61rqwz1isci7by34zyz38ah2rv5b8i5h618cxcl97hwqps8n2";
+      type = "gem";
+    };
+    version = "3.7.2";
+  };
+  jekyll-avatar = {
+    dependencies = ["jekyll"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0y2w7pnahkm3ddxrq589wv1w53ay7p1pvfs6khcmh6wq85r6wpsf";
+      type = "gem";
+    };
+    version = "0.5.0";
+  };
+  jekyll-coffeescript = {
+    dependencies = ["coffee-script" "coffee-script-source"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "06qf4j9f6ysjb4bq6gsdaiz2ksmhc5yb484v458ra3s6ybccqvvy";
+      type = "gem";
+    };
+    version = "1.1.1";
+  };
+  jekyll-docs = {
+    dependencies = ["jekyll"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0dw8pvxr0q02rivc0n0v4w6151zi6s212xwl27iam6pjc8skbg9b";
+      type = "gem";
+    };
+    version = "3.7.2";
+  };
+  jekyll-feed = {
+    dependencies = ["jekyll"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0kr3kyaq4z3jixn6ay8h16bxxlv6slvvp7nqnl05jdymhkl0bmm9";
+      type = "gem";
+    };
+    version = "0.9.3";
+  };
+  jekyll-gist = {
+    dependencies = ["octokit"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "03wz9j6yq3552nzf4g71qrdm9pfdgbm68abml9sjjgiaan1n8ns9";
+      type = "gem";
+    };
+    version = "1.5.0";
+  };
+  jekyll-mentions = {
+    dependencies = ["activesupport" "html-pipeline" "jekyll"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "00nqm1ng4iiibmv4vx0ayzq7fqm2sm1af98r4ykvld6asqj5qkyd";
+      type = "gem";
+    };
+    version = "1.2.0";
+  };
+  jekyll-paginate = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0r7bcs8fq98zldih4787zk5i9w24nz5wa26m84ssja95n3sas2l8";
+      type = "gem";
+    };
+    version = "1.1.0";
+  };
+  jekyll-redirect-from = {
+    dependencies = ["jekyll"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1crm5xqgv5asbbbaxfgky4ppib5rih59yzpa3yc94gh8b9cjixrj";
+      type = "gem";
+    };
+    version = "0.13.0";
+  };
+  jekyll-sass-converter = {
+    dependencies = ["sass"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "008ikh5fk0n6ri54mylcl8jn0mq8p2nfyfqif2q3pp0lwilkcxsk";
+      type = "gem";
+    };
+    version = "1.5.2";
+  };
+  jekyll-seo-tag = {
+    dependencies = ["jekyll"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0f9b2mvmx57zj49afb3x8cmzdmb1kh4rbpbv3v7w5bh47g2c9big";
+      type = "gem";
+    };
+    version = "2.4.0";
+  };
+  jekyll-sitemap = {
+    dependencies = ["jekyll"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0xy93ysl1q8r4xhbnffycvsslja0dskh2z2pl1jnykwsy27dc89n";
+      type = "gem";
+    };
+    version = "1.2.0";
+  };
+  jekyll-watch = {
+    dependencies = ["listen"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0m7scvj3ki8bmyx5v8pzibpg6my10nycnc28lip98dskf8iakprp";
+      type = "gem";
+    };
+    version = "2.0.0";
+  };
+  jemoji = {
+    dependencies = ["activesupport" "gemoji" "html-pipeline" "jekyll"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0acmi7mgr844dmzgfi9flcqkkb0jh5l21h579cidxwf1409w588b";
+      type = "gem";
+    };
+    version = "0.9.0";
+  };
+  kramdown = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0mkrqpp01rrfn3rx6wwsjizyqmafp0vgg8ja1dvbjs185r5zw3za";
+      type = "gem";
+    };
+    version = "1.16.2";
+  };
+  liquid = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "17fa0jgwm9a935fyvzy8bysz7j5n1vf1x2wzqkdfd5k08dbw3x2y";
+      type = "gem";
+    };
+    version = "4.0.0";
+  };
+  liquid-c = {
+    dependencies = ["liquid"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0a5n7q314ma32y7v9a1g6ps60b14zfn2q4nip4j5aknblz51v7gi";
+      type = "gem";
+    };
+    version = "3.0.0";
+  };
+  listen = {
+    dependencies = ["rb-fsevent" "rb-inotify" "ruby_dep"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "01v5mrnfqm6sgm8xn2v5swxsn1wlmq7rzh2i48d4jzjsc7qvb6mx";
+      type = "gem";
+    };
+    version = "3.1.5";
+  };
+  mercenary = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "10la0xw82dh5mqab8bl0dk21zld63cqxb1g16fk8cb39ylc4n21a";
+      type = "gem";
+    };
+    version = "0.3.6";
+  };
+  mime-types = {
+    dependencies = ["mime-types-data"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0087z9kbnlqhci7fxh9f6il63hj1k02icq2rs0c6cppmqchr753m";
+      type = "gem";
+    };
+    version = "3.1";
+  };
+  mime-types-data = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "04my3746hwa4yvbx1ranhfaqkgf6vavi1kyijjnw8w3dy37vqhkm";
+      type = "gem";
+    };
+    version = "3.2016.0521";
+  };
+  mini_portile2 = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "13d32jjadpjj6d2wdhkfpsmy68zjx90p49bgf8f7nkpz86r1fr11";
+      type = "gem";
+    };
+    version = "2.3.0";
+  };
+  minitest = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0icglrhghgwdlnzzp4jf76b0mbc71s80njn5afyfjn4wqji8mqbq";
+      type = "gem";
+    };
+    version = "5.11.3";
+  };
+  multi_json = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1rl0qy4inf1mp8mybfk56dfga0mvx97zwpmq5xmiwl5r770171nv";
+      type = "gem";
+    };
+    version = "1.13.1";
+  };
+  multipart-post = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "09k0b3cybqilk1gwrwwain95rdypixb2q9w65gd44gfzsd84xi1x";
+      type = "gem";
+    };
+    version = "2.0.0";
+  };
+  nokogiri = {
+    dependencies = ["mini_portile2"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "05fm3xh462glvs0rwnfmc1spmgl4ljg2giifynbmwwqvl42zaaiq";
+      type = "gem";
+    };
+    version = "1.8.2";
+  };
+  octokit = {
+    dependencies = ["sawyer"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1hp77svmpxcwnfajb324i1g2b7jazg23fn4ccjr5y3lww0rnj1dg";
+      type = "gem";
+    };
+    version = "4.8.0";
+  };
+  pathutil = {
+    dependencies = ["forwardable-extended"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0wc18ms1rzi44lpjychyw2a96jcmgxqdvy2949r4vvb5f4p0lgvz";
+      type = "gem";
+    };
+    version = "0.16.1";
+  };
+  public_suffix = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1x5h1dh1i3gwc01jbg01rly2g6a1qwhynb1s8a30ic507z1nh09s";
+      type = "gem";
+    };
+    version = "3.0.2";
+  };
+  "pygments.rb" = {
+    dependencies = ["multi_json"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0lbvnwvz770ambm4d6lxgc2097rydn5rcc5d6986bnkzyxfqqjnv";
+      type = "gem";
+    };
+    version = "1.2.1";
+  };
+  rb-fsevent = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1fbpmjypwxkb8r7y1kmhmyp6gawa4byw0yb3jc3dn9ly4ld9lizf";
+      type = "gem";
+    };
+    version = "0.10.2";
+  };
+  rb-inotify = {
+    dependencies = ["ffi"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0yfsgw5n7pkpyky6a9wkf1g9jafxb0ja7gz0qw0y14fd2jnzfh71";
+      type = "gem";
+    };
+    version = "0.9.10";
+  };
+  rdiscount = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1arvk3k06prxasq1djbj065ixar4zl171340g7wr1ww4gj9makx3";
+      type = "gem";
+    };
+    version = "2.2.0.1";
+  };
+  rdoc = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1vzhv04lp76iax258dh47zsxhjg34r9sg76vgikbyfywjzflvfyj";
+      type = "gem";
+    };
+    version = "6.0.1";
+  };
+  redcarpet = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0h9qz2hik4s9knpmbwrzb3jcp3vc5vygp9ya8lcpl7f1l9khmcd7";
+      type = "gem";
+    };
+    version = "3.4.0";
+  };
+  rouge = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1sfhy0xxqjnzqa7qxmpz1bmy0mzcr55qyvi410gsb6d6i4ialbw3";
+      type = "gem";
+    };
+    version = "3.1.1";
+  };
+  ruby_dep = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1c1bkl97i9mkcvkn1jks346ksnvnnp84cs22gwl0vd7radybrgy5";
+      type = "gem";
+    };
+    version = "1.5.0";
+  };
+  safe_yaml = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1hly915584hyi9q9vgd968x2nsi5yag9jyf5kq60lwzi5scr7094";
+      type = "gem";
+    };
+    version = "1.0.4";
+  };
+  sass = {
+    dependencies = ["sass-listen"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "10401m2xlv6vaxfwzy4xxmk51ddcnkvwi918cw3jkki0qqdl7d8v";
+      type = "gem";
+    };
+    version = "3.5.5";
+  };
+  sass-listen = {
+    dependencies = ["rb-fsevent" "rb-inotify"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0xw3q46cmahkgyldid5hwyiwacp590zj2vmswlll68ryvmvcp7df";
+      type = "gem";
+    };
+    version = "4.0.0";
+  };
+  sawyer = {
+    dependencies = ["addressable" "faraday"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0sv1463r7bqzvx4drqdmd36m7rrv6sf1v3c6vswpnq3k6vdw2dvd";
+      type = "gem";
+    };
+    version = "0.8.1";
+  };
+  thread_safe = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0nmhcgq6cgz44srylra07bmaw99f5271l0dpsvl5f75m44l0gmwy";
+      type = "gem";
+    };
+    version = "0.3.6";
+  };
+  tomlrb = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "09gh67v8s1pr7c37490sjp782gi4wf9k9cadp4l926h1sp27bcgz";
+      type = "gem";
+    };
+    version = "1.2.6";
+  };
+  tzinfo = {
+    dependencies = ["thread_safe"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1fjx9j327xpkkdlxwmkl3a8wqj7i4l4jwlrv3z13mg95z9wl253z";
+      type = "gem";
+    };
+    version = "1.2.5";
+  };
+  yajl-ruby = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1rn4kc9fha990yd252wglh6rcyh35cavm1vpyfj8krlcwph09g30";
+      type = "gem";
+    };
+    version = "1.3.1";
+  };
+}
\ No newline at end of file
diff --git a/pkgs/applications/misc/jekyll/gemset.nix b/pkgs/applications/misc/jekyll/gemset.nix
deleted file mode 100644
index 5b1a35209aeb..000000000000
--- a/pkgs/applications/misc/jekyll/gemset.nix
+++ /dev/null
@@ -1,183 +0,0 @@
-{
-  addressable = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "1j5r0anj8m4qlf2psnldip4b8ha2bsscv11lpdgnfh4nnchzjnxw";
-      type = "gem";
-    };
-    version = "2.5.0";
-  };
-  colorator = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "0f7wvpam948cglrciyqd798gdc6z3cfijciavd0dfixgaypmvy72";
-      type = "gem";
-    };
-    version = "1.1.0";
-  };
-  ffi = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "034f52xf7zcqgbvwbl20jwdyjwznvqnwpbaps9nk18v9lgb1dpx0";
-      type = "gem";
-    };
-    version = "1.9.18";
-  };
-  forwardable-extended = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "15zcqfxfvsnprwm8agia85x64vjzr2w0xn9vxfnxzgcv8s699v0v";
-      type = "gem";
-    };
-    version = "2.6.0";
-  };
-  jekyll = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "0qbnjx7bpshbcam6p9ss2g6gpd3gxz6h4w9yszphj3ip335yhawb";
-      type = "gem";
-    };
-    version = "3.4.1";
-  };
-  jekyll-feed = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "1dj62gy1jskkn703mi5h0bkg1psbpkdm2qqdw3bhjfid9358qvay";
-      type = "gem";
-    };
-    version = "0.9.1";
-  };
-  jekyll-paginate = {
-    source = {
-      sha256 = "0r7bcs8fq98zldih4787zk5i9w24nz5wa26m84ssja95n3sas2l8";
-      type = "gem";
-    };
-    version = "1.1.0";
-  };
-  jekyll-sass-converter = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "01m921763yfgx1gc33k5ixqz623f4c4azgnpqhgsc2q61fyfk3q1";
-      type = "gem";
-    };
-    version = "1.5.0";
-  };
-  jekyll-watch = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "02rg3wi95w2l0bg1igl5k6pza723vn2b2gj975gycz1cpmhdjn6z";
-      type = "gem";
-    };
-    version = "1.5.0";
-  };
-  kramdown = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "1isiqc40q44zg57bd6cfnw1a2l0s2j5skw2awn2cz3gcm7wsf49d";
-      type = "gem";
-    };
-    version = "1.13.2";
-  };
-  liquid = {
-    source = {
-      sha256 = "033png37ym4jrjz5bi7zb4ic4yxacwvnllm1xxmrnr4swgyyygc2";
-      type = "gem";
-    };
-    version = "3.0.6";
-  };
-  listen = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "1l0y7hbyfiwpvk172r28hsdqsifq1ls39hsfmzi1vy4ll0smd14i";
-      type = "gem";
-    };
-    version = "3.0.8";
-  };
-  mercenary = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "10la0xw82dh5mqab8bl0dk21zld63cqxb1g16fk8cb39ylc4n21a";
-      type = "gem";
-    };
-    version = "0.3.6";
-  };
-  minima = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "1s7ks9fqfvqx7qicnkrg76wavg9mjas52f7iyhr89lz9mqiy7p39";
-      type = "gem";
-    };
-    version = "2.1.0";
-  };
-  pathutil = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "0f444wx6vjd30lkkb2zn1k5a6g33lidrpyy7lmgy66n1gsiipzn7";
-      type = "gem";
-    };
-    version = "0.14.0";
-  };
-  public_suffix = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "040jf98jpp6w140ghkhw2hvc1qx41zvywx5gj7r2ylr1148qnj7q";
-      type = "gem";
-    };
-    version = "2.0.5";
-  };
-  rb-fsevent = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "1pdiasp9zlr306yld19szapi6kdjk38rpv1hih9x0ry40x6mb63n";
-      type = "gem";
-    };
-    version = "0.9.8";
-  };
-  rb-inotify = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "0bq14f3md5nm00kgxgf0r9lcbn0vgbwljgajif0slxcwv622fjg9";
-      type = "gem";
-    };
-    version = "0.9.8";
-  };
-  rdiscount = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "1arvk3k06prxasq1djbj065ixar4zl171340g7wr1ww4gj9makx3";
-      type = "gem";
-    };
-    version = "2.2.0.1";
-  };
-  RedCloth = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "0m9dv7ya9q93r8x1pg2gi15rxlbck8m178j1fz7r5v6wr1avrrqy";
-      type = "gem";
-    };
-    version = "4.3.2";
-  };
-  rouge = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "13amckbdknnc5491ag28y8pqbyfpbzx5n4rlmadxhd3wkrhp92c8";
-      type = "gem";
-    };
-    version = "1.11.1";
-  };
-  safe_yaml = {
-    source = {
-      sha256 = "1hly915584hyi9q9vgd968x2nsi5yag9jyf5kq60lwzi5scr7094";
-      type = "gem";
-    };
-    version = "1.0.4";
-  };
-  sass = {
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "0da4mn3n60cm1ss1pw1rrpa7fxagglxiwcgvz1asf1qgf4mvcwyr";
-      type = "gem";
-    };
-    version = "3.4.23";
-  };
-}
\ No newline at end of file
diff --git a/pkgs/applications/misc/keepass/default.nix b/pkgs/applications/misc/keepass/default.nix
index 49e4711550da..bee86cb0ed39 100644
--- a/pkgs/applications/misc/keepass/default.nix
+++ b/pkgs/applications/misc/keepass/default.nix
@@ -8,34 +8,17 @@
 # plugin derivations in the Nix store and nowhere else.
 with builtins; buildDotnetPackage rec {
   baseName = "keepass";
-  version = "2.37";
+  version = "2.38";
 
   src = fetchurl {
     url = "mirror://sourceforge/keepass/KeePass-${version}-Source.zip";
-    sha256 = "1wfbpfjng1blzkbjnxsdnny544297bm9869ianbr6l0hrvcgv3qx";
+    sha256 = "0m33gfpvv01xc28k4rrc8llbyk6qanm9rsqcnv8ydms0cr78dbbk";
   };
 
   sourceRoot = ".";
 
   buildInputs = [ unzip makeWrapper icoutils ];
 
-  pluginLoadPathsPatch =
-    let outputLc = toString (add 7 (length plugins));
-        patchTemplate = readFile ./keepass-plugins.patch;
-        loadTemplate  = readFile ./keepass-plugins-load.patch;
-        loads =
-          lib.concatStrings
-            (map
-              (p: replaceStrings ["$PATH$"] [ (unsafeDiscardStringContext (toString p)) ] loadTemplate)
-              plugins);
-    in replaceStrings ["$OUTPUT_LC$" "$DO_LOADS$"] [outputLc loads] patchTemplate;
-
-  passAsFile = [ "pluginLoadPathsPatch" ];
-  postPatch = ''
-    sed -i 's/\r*$//' KeePass/Forms/MainForm.cs
-    patch -p1 <$pluginLoadPathsPatchPath
-  '';
-
   preConfigure = ''
     rm -rvf Build/*
     find . -name "*.sln" -print -exec sed -i 's/Format Version 10.00/Format Version 11.00/g' {} \;
diff --git a/pkgs/applications/misc/keepass/keepass-plugins-load.patch b/pkgs/applications/misc/keepass/keepass-plugins-load.patch
deleted file mode 100644
index b7bea38e4c81..000000000000
--- a/pkgs/applications/misc/keepass/keepass-plugins-load.patch
+++ /dev/null
@@ -1 +0,0 @@
-+				m_pluginManager.LoadAllPlugins("$PATH$/lib/dotnet/keepass", SearchOption.TopDirectoryOnly, new string[] {});
diff --git a/pkgs/applications/misc/keepass/keepass-plugins.patch b/pkgs/applications/misc/keepass/keepass-plugins.patch
deleted file mode 100644
index 1793f04a1708..000000000000
--- a/pkgs/applications/misc/keepass/keepass-plugins.patch
+++ /dev/null
@@ -1,46 +0,0 @@
---- old/KeePass/Forms/MainForm.cs
-+++ new/KeePass/Forms/MainForm.cs
-@@ -386,42 +386,$OUTPUT_LC$ @@ namespace KeePass.Forms
- 			m_pluginManager.UnloadAllPlugins();
- 			if(AppPolicy.Current.Plugins)
- 			{
--				string[] vExclNames = new string[] {
--					AppDefs.FileNames.Program, AppDefs.FileNames.XmlSerializers,
--					AppDefs.FileNames.NativeLib32, AppDefs.FileNames.NativeLib64,
--					AppDefs.FileNames.ShInstUtil
--				};
--
--				string strPlgRoot = UrlUtil.GetFileDirectory(
--					WinUtil.GetExecutable(), false, true);
--				m_pluginManager.LoadAllPlugins(strPlgRoot, SearchOption.TopDirectoryOnly,
--					vExclNames);
--
--				if(!NativeLib.IsUnix())
--				{
--					string strPlgSub = UrlUtil.EnsureTerminatingSeparator(strPlgRoot,
--						false) + AppDefs.PluginsDir;
--					m_pluginManager.LoadAllPlugins(strPlgSub, SearchOption.AllDirectories,
--						vExclNames);
--				}
--				else // Unix
--				{
--					try
--					{
--						DirectoryInfo diPlgRoot = new DirectoryInfo(strPlgRoot);
--						foreach(DirectoryInfo diSub in diPlgRoot.GetDirectories())
--						{
--							if(diSub == null) { Debug.Assert(false); continue; }
--
--							if(string.Equals(diSub.Name, AppDefs.PluginsDir,
--								StrUtil.CaseIgnoreCmp))
--								m_pluginManager.LoadAllPlugins(diSub.FullName,
--									SearchOption.AllDirectories, vExclNames);
--						}
--					}
--					catch(Exception) { Debug.Assert(false); }
--				}
--			}
-$DO_LOADS$+			}
- 
- 			// Delete old files *after* loading plugins (when timestamps
- 			// of loaded plugins have been updated already)
diff --git a/pkgs/applications/misc/khard/default.nix b/pkgs/applications/misc/khard/default.nix
index 3a87e854dc1f..5f3ac3d93c44 100644
--- a/pkgs/applications/misc/khard/default.nix
+++ b/pkgs/applications/misc/khard/default.nix
@@ -1,13 +1,13 @@
 { stdenv, fetchurl, fetchFromGitHub, glibcLocales, python3Packages }:
 
 python3Packages.buildPythonApplication rec {
-  version = "0.11.4";
+  version = "0.12.2";
   name = "khard-${version}";
   namePrefix = "";
 
   src = fetchurl {
     url = "https://github.com/scheibler/khard/archive/v${version}.tar.gz";
-    sha256 = "1hngg3z5cdjny7wdf2mf9wv35ffx7ivpq6mx7kgqf40fr5905l0r";
+    sha256 = "0lxcvzmafpvqcifgq2xjh1ca07z0vhihn5jnw8zrpmsqdc9p6b4j";
   };
 
   # setup.py reads the UTF-8 encoded readme.
@@ -19,7 +19,9 @@ python3Packages.buildPythonApplication rec {
     configobj
     vobject
     argparse
-    pyyaml
+    ruamel_yaml
+    ruamel_base
+    unidecode
   ];
 
   # Fails; but there are no tests anyway.
diff --git a/pkgs/applications/misc/lilyterm/default.nix b/pkgs/applications/misc/lilyterm/default.nix
index 3729978dddb0..36527cdbe7c3 100644
--- a/pkgs/applications/misc/lilyterm/default.nix
+++ b/pkgs/applications/misc/lilyterm/default.nix
@@ -52,7 +52,7 @@ stdenv.mkDerivation rec {
     '';
     homepage = http://lilyterm.luna.com.tw/;
     license = licenses.gpl3;
-    maintainers = with maintainers; [ AndersonTorres profpatsch ];
+    maintainers = with maintainers; [ AndersonTorres Profpatsch ];
     platforms = platforms.linux;
   };
 }
diff --git a/pkgs/applications/misc/madonctl/default.nix b/pkgs/applications/misc/madonctl/default.nix
index af8d00b59bfb..787ce7231f30 100644
--- a/pkgs/applications/misc/madonctl/default.nix
+++ b/pkgs/applications/misc/madonctl/default.nix
@@ -26,6 +26,6 @@ buildGoPackage rec {
     homepage = https://github.com/McKael/madonctl;
     license = licenses.mit;
     platforms = platforms.unix;
-    maintainers = with maintainers; [ matthiasbeyer ];
+    maintainers = with maintainers; [ ];
   };
 }
diff --git a/pkgs/applications/misc/memo/default.nix b/pkgs/applications/misc/memo/default.nix
index 642b0c65efcd..fc1c08dc2b2c 100644
--- a/pkgs/applications/misc/memo/default.nix
+++ b/pkgs/applications/misc/memo/default.nix
@@ -1,4 +1,4 @@
-{ fetchFromGitHub, ack , tree, stdenv, ... }:
+{ fetchFromGitHub, ag, tree, stdenv, ... }:
 
 stdenv.mkDerivation rec {
 
@@ -15,6 +15,9 @@ stdenv.mkDerivation rec {
 
   installPhase = ''
     mkdir -p $out/{bin,share/man/man1,share/bash-completion/completions}
+    substituteInPlace memo \
+      --replace "ack "  "${ag}/bin/ag " \
+      --replace "tree " "${tree}/bin/tree "
     mv memo $out/bin/
     mv doc/memo.1 $out/share/man/man1/memo.1
     mv completion/memo.bash $out/share/bash-completion/completions/memo.sh
@@ -32,4 +35,4 @@ stdenv.mkDerivation rec {
     maintainers = [ stdenv.lib.maintainers.mrVanDalo ];
     platforms = stdenv.lib.platforms.all;
   };
-}
\ No newline at end of file
+}
diff --git a/pkgs/applications/misc/mwic/default.nix b/pkgs/applications/misc/mwic/default.nix
index 2faf082197c8..e6ac35d19a0c 100644
--- a/pkgs/applications/misc/mwic/default.nix
+++ b/pkgs/applications/misc/mwic/default.nix
@@ -1,12 +1,12 @@
 { stdenv, fetchurl, pythonPackages }:
 
 stdenv.mkDerivation rec {
-  version = "0.7.3";
+  version = "0.7.4";
   name = "mwic-${version}";
 
   src = fetchurl {
     url = "https://github.com/jwilk/mwic/releases/download/${version}/${name}.tar.gz";
-    sha256 = "0baa2pnaba954k169p9rpzc66mhz9zqdd3lz9q95rp9dgygvchzn";
+    sha256 = "0c0xk7wx4vaamlry6srdixw1q6afmqznvxdzcg1skr0qjypw5i5q";
   };
 
   makeFlags=["PREFIX=\${out}"];
diff --git a/pkgs/applications/misc/nnn/default.nix b/pkgs/applications/misc/nnn/default.nix
index a2e96593ae2e..d651f9ef3b66 100644
--- a/pkgs/applications/misc/nnn/default.nix
+++ b/pkgs/applications/misc/nnn/default.nix
@@ -4,13 +4,13 @@ with stdenv.lib;
 
 stdenv.mkDerivation rec {
   name = "nnn-${version}";
-  version = "1.5";
+  version = "1.6";
 
   src = fetchFromGitHub {
     owner = "jarun";
     repo = "nnn";
     rev = "v${version}";
-    sha256 = "10gcbklh0cp12293lzlwcplj0in90p95x4fyvg1smg4cxamkibvn";
+    sha256 = "1yl4k39wkh2ins7fz585kc4cg6fagiswgqkh5g36db1bka3v1kn0";
   };
 
   configFile = optionalString (conf!=null) (builtins.toFile "nnn.h" conf);
diff --git a/pkgs/applications/misc/octoprint/default.nix b/pkgs/applications/misc/octoprint/default.nix
index 972fbfb7b072..6587305a770f 100644
--- a/pkgs/applications/misc/octoprint/default.nix
+++ b/pkgs/applications/misc/octoprint/default.nix
@@ -54,14 +54,13 @@ let
 
 in pythonPackages.buildPythonApplication rec {
   name = "OctoPrint-${version}";
-  version = "1.3.5";
-  # 1.3.5, 2017-10-16, 77753ca02602d3a798d6b0a22535e6fd69ff448a
+  version = "1.3.6";
 
   src = fetchFromGitHub {
     owner = "foosel";
     repo = "OctoPrint";
     rev = version;
-    sha256 = "13krv9i6gm4jn4cb327q4qma4xwwashjnc0dia8vlnbjbbvkrni4";
+    sha256 = "0pgpkjw5zjnks5bky51gjaksq8mhrzkl52kpgf799hl35pd08xr3";
   };
 
   # We need old Tornado
@@ -70,7 +69,7 @@ in pythonPackages.buildPythonApplication rec {
     semantic-version flask_principal werkzeug flaskbabel tornado
     psutil pyserial flask_login netaddr markdown sockjs-tornado
     pylru pyyaml sarge feedparser netifaces click websocket_client
-    scandir chainmap future dateutil futures wrapt
+    scandir chainmap future dateutil futures wrapt monotonic emoji
   ];
 
   buildInputs = with pythonPackages; [ nose mock ddt ];
diff --git a/pkgs/applications/misc/pinfo/default.nix b/pkgs/applications/misc/pinfo/default.nix
index 6d0a348b1f76..1085fed09565 100644
--- a/pkgs/applications/misc/pinfo/default.nix
+++ b/pkgs/applications/misc/pinfo/default.nix
@@ -5,7 +5,7 @@ stdenv.mkDerivation {
 
   src = fetchurl {
     # homepage needed you to login to download the tarball
-    url = "http://pkgs.fedoraproject.org/repo/pkgs/pinfo/pinfo-0.6.10.tar.bz2"
+    url = "http://src.fedoraproject.org/repo/pkgs/pinfo/pinfo-0.6.10.tar.bz2"
       + "/fe3d3da50371b1773dfe29bf870dbc5b/pinfo-0.6.10.tar.bz2";
     sha256 = "0p8wyrpz9npjcbx6c973jspm4c3xz4zxx939nngbq49xqah8088j";
   };
diff --git a/pkgs/applications/misc/qsyncthingtray/default.nix b/pkgs/applications/misc/qsyncthingtray/default.nix
index bc909742c6df..763435da564d 100644
--- a/pkgs/applications/misc/qsyncthingtray/default.nix
+++ b/pkgs/applications/misc/qsyncthingtray/default.nix
@@ -1,8 +1,9 @@
-{ mkDerivation, stdenv, lib, fetchFromGitHub, procps ? null
+{ mkDerivation, stdenv, lib, fetchFromGitHub, fetchpatch, procps ? null
 , qtbase, qtwebengine, qtwebkit
 , cmake
 , syncthing, syncthing-inotify ? null
-, preferQWebView ? false }:
+, preferQWebView ? false
+, preferNative   ? true }:
 
 mkDerivation rec {
   version = "0.5.8";
@@ -16,11 +17,18 @@ mkDerivation rec {
   };
 
   buildInputs = [ qtbase qtwebengine ] ++ lib.optional preferQWebView qtwebkit;
+
   nativeBuildInputs = [ cmake ];
 
-  cmakeFlags = lib.optional preferQWebView "-DQST_BUILD_WEBKIT=1";
+  cmakeFlags = [ ]
+    ++ lib.optional preferQWebView "-DQST_BUILD_WEBKIT=1"
+    ++ lib.optional preferNative   "-DQST_BUILD_NATIVEBROWSER=1";
 
-  patches = [ ./qsyncthingtray-0.5.8-qt-5.6.3.patch ];
+  patches = [ (fetchpatch {
+    name = "support_native_browser.patch";
+    url = "https://patch-diff.githubusercontent.com/raw/sieren/QSyncthingTray/pull/225.patch";
+    sha256 = "0w665xdlsbjxs977pdpzaclxpswf7xys1q3rxriz181lhk2y66yy";
+  }) ] ++ lib.optional (!preferQWebView && !preferNative) ./qsyncthingtray-0.5.8-qt-5.6.3.patch;
 
   postPatch = ''
     ${lib.optionalString stdenv.isLinux ''
@@ -60,6 +68,8 @@ mkDerivation rec {
     maintainers = with maintainers; [ zraexy peterhoeg ];
     platforms = platforms.all;
     # 0.5.7 segfaults when opening the main panel with qt 5.7 and fails to compile with qt 5.8
-    broken = builtins.compareVersions qtbase.version "5.7.0" >= 0;
+    # but qt > 5.6 works when only using the native browser
+    # https://github.com/sieren/QSyncthingTray/issues/223
+    broken = (builtins.compareVersions qtbase.version "5.7.0" >= 0 && !preferNative);
   };
 }
diff --git a/pkgs/applications/misc/ranger/default.nix b/pkgs/applications/misc/ranger/default.nix
index ce1c790614ee..6ac27f145a93 100644
--- a/pkgs/applications/misc/ranger/default.nix
+++ b/pkgs/applications/misc/ranger/default.nix
@@ -6,7 +6,7 @@ with stdenv.lib;
 assert imagePreviewSupport -> w3m != null;
 
 pythonPackages.buildPythonApplication rec {
-  name = "ranger-v${version}";
+  name = "ranger-${version}";
   version = "1.9.0";
 
   src = fetchFromGitHub {
diff --git a/pkgs/applications/misc/redshift/default.nix b/pkgs/applications/misc/redshift/default.nix
index 9871c559523c..c0e481ae8788 100644
--- a/pkgs/applications/misc/redshift/default.nix
+++ b/pkgs/applications/misc/redshift/default.nix
@@ -41,7 +41,10 @@ stdenv.mkDerivation rec {
   pythonPath = [ pygobject3 pyxdg ];
 
   preConfigure = "./bootstrap";
-  postFixup = "wrapPythonPrograms";
+  postFixup = ''
+    wrapPythonPrograms
+    rm "$out/share/icons/hicolor/icon-theme.cache"
+  '';
 
   enableParallelBuilding = true;
 
diff --git a/pkgs/applications/misc/sc-im/default.nix b/pkgs/applications/misc/sc-im/default.nix
index c093a7516031..e664a5a75274 100644
--- a/pkgs/applications/misc/sc-im/default.nix
+++ b/pkgs/applications/misc/sc-im/default.nix
@@ -1,14 +1,14 @@
 { stdenv, fetchFromGitHub, yacc, ncurses, libxml2, libzip, libxls, pkgconfig }:
 
 stdenv.mkDerivation rec {
-  version = "0.6.0";
+  version = "0.7.0";
   name = "sc-im-${version}";
 
   src = fetchFromGitHub {
     owner = "andmarti1424";
     repo = "sc-im";
     rev = "v${version}";
-    sha256 = "02ak3b0vv72mv38cwvy7qp0y6hgrzcgahkv1apgks3drpnz5w1sj";
+    sha256 = "0xi0n9qzby012y2j7hg4fgcwyly698sfi4i9gkvy0q682jihprbk";
   };
 
   nativeBuildInputs = [ pkgconfig ];
@@ -17,6 +17,8 @@ stdenv.mkDerivation rec {
   buildPhase = ''
     cd src
 
+    sed 's/LDLIBS += -lm/& -lncurses/' -i Makefile
+
     sed -e "\|^prefix  = /usr/local|   s|/usr/local|$out|" \
         -e "\|^#LDLIBS += -lxlsreader| s|^#||            " \
         -e "\|^#CFLAGS += -DXLS|       s|^#||            " \
diff --git a/pkgs/applications/misc/sigal/default.nix b/pkgs/applications/misc/sigal/default.nix
index ae2bab64187d..622f6e147524 100644
--- a/pkgs/applications/misc/sigal/default.nix
+++ b/pkgs/applications/misc/sigal/default.nix
@@ -1,12 +1,12 @@
 { lib, buildPythonApplication, fetchPypi, pythonPackages }:
 
 buildPythonApplication rec {
-  version = "1.3.0";
+  version = "1.4.0";
   pname   = "sigal";
 
   src = fetchPypi {
     inherit version pname;
-    sha256 = "0ycyrap4rc0yrjagi5c5fs5gpw9whvkli656syfpj99dq1q9q1d0";
+    sha256 = "0da0n8jhjp2swr18zga87xc77r8c7qwqf5sp222ph9sn3yyyc35i";
   };
 
   buildInputs = with pythonPackages; [ pytest ];
diff --git a/pkgs/applications/misc/slade/git.nix b/pkgs/applications/misc/slade/git.nix
new file mode 100644
index 000000000000..29e01da1b5b1
--- /dev/null
+++ b/pkgs/applications/misc/slade/git.nix
@@ -0,0 +1,26 @@
+{ stdenv, fetchFromGitHub, cmake, pkgconfig, wxGTK, gtk2, sfml, fluidsynth, curl, freeimage, ftgl, glew, zip }:
+
+stdenv.mkDerivation {
+  name = "slade-git-3.1.2.2018.01.29";
+
+  src = fetchFromGitHub {
+    owner = "sirjuddington";
+    repo = "SLADE";
+    rev = "f7409c504b40c4962f419038db934c32688ddd2e";
+    sha256 = "14icxiy0r9rlcc10skqs1ylnxm1f0f3irhzfmx4sazq0pjv5ivld";
+  };
+
+  cmakeFlags = ["-DNO_WEBVIEW=1"];
+  nativeBuildInputs = [ cmake pkgconfig zip ];
+  buildInputs = [ wxGTK gtk2 sfml fluidsynth curl freeimage ftgl glew ];
+
+  enableParallelBuilding = true;
+
+  meta = with stdenv.lib; {
+    description = "Doom editor";
+    homepage = http://slade.mancubus.net/;
+    license = licenses.gpl2Plus;
+    platforms = platforms.linux;
+    maintainers = with maintainers; [ ertes ];
+  };
+}
diff --git a/pkgs/applications/misc/slic3r-prusa3d/default.nix b/pkgs/applications/misc/slic3r-prusa3d/default.nix
new file mode 100644
index 000000000000..a4ac924cfae0
--- /dev/null
+++ b/pkgs/applications/misc/slic3r-prusa3d/default.nix
@@ -0,0 +1,98 @@
+{ stdenv, fetchFromGitHub, makeWrapper, which, cmake, perl, perlPackages,
+  boost, tbb, wxGTK30, pkgconfig, gtk3, fetchurl, gtk2, bash, mesa_glu,
+  glew, eigen }:
+let
+  AlienWxWidgets = perlPackages.buildPerlPackage rec {
+    name = "Alien-wxWidgets-0.69";
+    src = fetchurl {
+      url = "mirror://cpan/authors/id/M/MD/MDOOTSON/${name}.tar.gz";
+      sha256 = "075m880klf66pbcfk0la2nl60vd37jljizqndrklh5y4zvzdy1nr";
+    };
+    propagatedBuildInputs = [
+      pkgconfig perlPackages.ModulePluggable perlPackages.ModuleBuild
+      gtk2 gtk3 wxGTK30
+    ];
+  };
+
+  Wx = perlPackages.Wx.overrideAttrs (oldAttrs: {
+    propagatedBuildInputs = [
+      perlPackages.ExtUtilsXSpp
+      AlienWxWidgets
+    ];
+  });
+
+  WxGLCanvas = perlPackages.buildPerlPackage rec {
+    name = "Wx-GLCanvas-0.09";
+    src = fetchurl {
+      url = "mirror://cpan/authors/id/M/MB/MBARBON/${name}.tar.gz";
+      sha256 = "1q4gvj4gdx4l8k4mkgiix24p9mdfy1miv7abidf0my3gy2gw5lka";
+    };
+    propagatedBuildInputs = [ Wx perlPackages.OpenGL mesa_glu ];
+    doCheck = false;
+  };
+in
+stdenv.mkDerivation rec {
+  name = "slic3r-prusa-edition-${version}";
+  version = "1.38.7";
+
+  enableParallelBuilding = true;
+
+  buildInputs = [
+    cmake
+    perl
+    makeWrapper
+    eigen
+    glew
+    tbb
+    which
+    Wx
+    WxGLCanvas
+  ] ++ (with perlPackages; [
+    boost
+    ClassXSAccessor
+    EncodeLocale
+    ExtUtilsMakeMaker
+    ExtUtilsXSpp
+    GrowlGNTP
+    ImportInto
+    IOStringy
+    locallib
+    LWP
+    MathClipper
+    MathConvexHullMonotoneChain
+    MathGeometryVoronoi
+    MathPlanePath
+    ModuleBuild
+    Moo
+    NetDBus
+    OpenGL
+    threads
+    XMLSAX
+  ]);
+
+  postInstall = ''
+    echo 'postInstall'
+    wrapProgram "$out/bin/slic3r-prusa3d" \
+    --prefix PERL5LIB : "$out/lib/slic3r-prusa3d:$PERL5LIB"
+
+    # it seems we need to copy the icons...
+    mkdir -p $out/bin/var
+    cp ../resources/icons/* $out/bin/var/
+    cp -r ../resources $out/bin/
+  '';
+
+  src = fetchFromGitHub {
+    owner = "prusa3d";
+    repo = "Slic3r";
+    sha256 = "1nrryd2bxmk4y59bq5fp7n2alyvc5a9xvnbx5j4fg4mqr91ccs5c";
+    rev = "version_${version}";
+  };
+
+  meta = with stdenv.lib; {
+    description = "G-code generator for 3D printer";
+    homepage = https://github.com/prusa3d/Slic3r;
+    license = licenses.agpl3;
+    platforms = platforms.linux;
+    maintainers = with maintainers; [ tweber ];
+  };
+}
diff --git a/pkgs/applications/misc/taskjuggler/default.nix b/pkgs/applications/misc/taskjuggler/default.nix
index 23252d0c4807..c5429b6c8510 100644
--- a/pkgs/applications/misc/taskjuggler/default.nix
+++ b/pkgs/applications/misc/taskjuggler/default.nix
@@ -7,6 +7,7 @@ bundlerEnv {
   gemdir = ./.;
 
   meta = {
+    broken = true; # needs ruby 2.0
     description = "A modern and powerful project management tool";
     homepage    = http://taskjuggler.org/;
     license     = lib.licenses.gpl2;
diff --git a/pkgs/applications/misc/tasknc/default.nix b/pkgs/applications/misc/tasknc/default.nix
index 1b3ca7dfc03c..0deda8ce35a3 100644
--- a/pkgs/applications/misc/tasknc/default.nix
+++ b/pkgs/applications/misc/tasknc/default.nix
@@ -1,48 +1,42 @@
-{ stdenv, fetchurl, taskwarrior, perl, ncurses }:
+{ stdenv, fetchFromGitHub, makeWrapper, perl, ncurses, taskwarrior }:
 
 stdenv.mkDerivation rec {
-  version = "0.8";
+  version = "2017-05-15";
   name = "tasknc-${version}";
 
-  src = fetchurl {
-    url = "https://github.com/mjheagle8/tasknc/archive/v${version}.tar.gz";
-    sha256 = "0max5schga9hmf3vfqk2ic91dr6raxglyyjcqchzla280kxn5c28";
+  src = fetchFromGitHub {
+    owner = "lharding";
+    repo = "tasknc";
+    rev = "c41d0240e9b848e432f01de735f28de93b934ae7";
+    sha256 = "0f7l7fy06p33vw6f6sjnjxfhw951664pmwhjl573jvmh6gi2h1yr";
   };
 
+  nativeBuildInputs = [
+    makeWrapper
+    perl # For generating the man pages with pod2man
+  ];
+
+  buildInputs = [ ncurses ];
+
   hardeningDisable = [ "format" ];
 
-  #
-  # I know this is ugly, but the Makefile does strange things in this package,
-  # so we have to:
-  #
-  #   1. Remove the "doc" task dependency from the "all" target
-  #   2. Remove the "tasknc.1" task dependency from the "install" target
-  #   3. Remove the installing of the tasknc.1 file from the install target as
-  #      we just removed the build target for it.
-  #
-  # TODO : One could also provide a patch for the doc/manual.pod file so it
-  # actually builds, but I'm not familiar with this, so this is the faster
-  # approach for me. We have no manpage, though.
-  #
-  preConfigure = ''
-    sed -i -r 's,(all)(.*)doc,\1\2,' Makefile
-    sed -i -r 's,(install)(.*)tasknc\.1,\1\2,' Makefile
-    sed -i -r 's,install\ -D\ -m644\ tasknc\.1\ (.*),,' Makefile
-  '';
+  buildFlags = [ "VERSION=${version}" ];
 
   installPhase = ''
-    mkdir $out/bin/ -p
-    mkdir $out/share/man1 -p
-    mkdir $out/share/tasknc -p
-    DESTDIR=$out PREFIX= MANPREFIX=share make install
+    mkdir -p $out/bin/
+    mkdir -p $out/share/man/man1
+    mkdir -p $out/share/tasknc
+
+    DESTDIR=$out PREFIX= MANPREFIX=/share/man make install
+
+    wrapProgram $out/bin/tasknc --prefix PATH : ${taskwarrior}/bin
   '';
 
-  buildInputs = [ taskwarrior perl ncurses ];
 
-  meta = {
-    homepage = https://github.com/mjheagle8/tasknc;
+  meta = with stdenv.lib; {
+    homepage = https://github.com/lharding/tasknc;
     description = "A ncurses wrapper around taskwarrior";
-    maintainers = [ stdenv.lib.maintainers.matthiasbeyer ];
-    platforms = stdenv.lib.platforms.linux; # Cannot test others
+    maintainers = with maintainers; [ matthiasbeyer infinisil ];
+    platforms = platforms.linux; # Cannot test others
   };
 }
diff --git a/pkgs/applications/misc/timewarrior/default.nix b/pkgs/applications/misc/timewarrior/default.nix
index f6dd7cb8c232..b2dcd418fb26 100644
--- a/pkgs/applications/misc/timewarrior/default.nix
+++ b/pkgs/applications/misc/timewarrior/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "timewarrior-${version}";
-  version = "1.1.0";
+  version = "1.1.1";
 
   enableParallelBuilding = true;
 
   src = fetchurl {
     url = "https://taskwarrior.org/download/timew-${version}.tar.gz";
-    sha256 = "0jnwj8lflr6nlch2j2hkmgpdqq3zbdd2sfpi5iwiabljk25v9iq9";
+    sha256 = "1jfcfzdwk5qqhxznj1bgy0sx3lnp3z5lqr9kch9a7iazwmi9lz8z";
   };
 
   nativeBuildInputs = [ cmake ];
@@ -17,7 +17,7 @@ stdenv.mkDerivation rec {
     description = "A command-line time tracker";
     homepage = https://tasktools.org/projects/timewarrior.html;
     license = licenses.mit;
-    maintainers = with maintainers; [ matthiasbeyer ];
+    maintainers = with maintainers; [ matthiasbeyer mrVanDalo ];
     platforms = platforms.linux;
   };
 }
diff --git a/pkgs/applications/misc/vifm/default.nix b/pkgs/applications/misc/vifm/default.nix
index c43ec5efbaff..ebc951c5bb93 100644
--- a/pkgs/applications/misc/vifm/default.nix
+++ b/pkgs/applications/misc/vifm/default.nix
@@ -6,11 +6,11 @@
 
 stdenv.mkDerivation rec {
   name = "vifm-${version}";
-  version = "0.9";
+  version = "0.9.1";
 
   src = fetchurl {
     url = "https://github.com/vifm/vifm/releases/download/v${version}/vifm-${version}.tar.bz2";
-    sha256 = "1zd72vcgir3g9rhs2iyca13qf5fc0b1f22y20f5gy92c3sfwj45b";
+    sha256 = "1cz7vjjmghgdxd1lvsdwv85gvx4kz8idq14qijpwkpfrf2va9f98";
   };
 
   nativeBuildInputs = [ pkgconfig ];
diff --git a/pkgs/applications/misc/welle-io/default.nix b/pkgs/applications/misc/welle-io/default.nix
index b1db01873a3a..d705de1a8cd6 100644
--- a/pkgs/applications/misc/welle-io/default.nix
+++ b/pkgs/applications/misc/welle-io/default.nix
@@ -3,7 +3,7 @@
 , faad2, rtl-sdr, libusb, fftwSinglePrec }:
 let
 
-  version = "1.0-rc1";
+  version = "1.0-rc2";
 
 in stdenv.mkDerivation {
 
@@ -13,7 +13,7 @@ in stdenv.mkDerivation {
     owner = "AlbrechtL";
     repo = "welle.io";
     rev = "V${version}";
-    sha256 = "1xi59rmk3rdqqxxxrm2pbllrlsql46vxs95l1pkfx7bp8f7n7rsv";
+    sha256 = "01x4ldq6lvmdrmxi857594nj9xpn2h7848vvf3f54sh1zrawn4k4";
   };
 
   nativeBuildInputs = [ cmake pkgconfig ];
diff --git a/pkgs/applications/misc/wsjtx/default.nix b/pkgs/applications/misc/wsjtx/default.nix
new file mode 100644
index 000000000000..8a23134e3ed0
--- /dev/null
+++ b/pkgs/applications/misc/wsjtx/default.nix
@@ -0,0 +1,41 @@
+{ stdenv, fetchurl, asciidoc, asciidoctor, autoconf, automake, cmake,
+  docbook_xsl, fftw, fftwFloat, gfortran, libtool, libpulseaudio, qtbase,
+  qtmultimedia, qtserialport, texinfo, libusb1 }:
+
+stdenv.mkDerivation rec {
+  name = "wsjtx-${version}";
+  version = "1.8.0";
+
+  # This is a composite source tarball containing both wsjtx and a hamlib fork
+  src = fetchurl {
+    url = "http://physics.princeton.edu/pulsar/K1JT/wsjtx-${version}.tgz";
+    sha256 = "21603ad4d5f43cd9c79a6e8cf468bde88c554654012b2c6c1ef9144cfbf668ce";
+  };
+
+  # Hamlib builds with autotools, wsjtx builds with cmake
+  # Omitting pkgconfig because it causes issues locating the built hamlib
+  nativeBuildInputs = [
+    asciidoc asciidoctor autoconf automake cmake docbook_xsl gfortran libtool
+    texinfo
+  ];
+  buildInputs = [ fftw fftwFloat libusb1 qtbase qtmultimedia qtserialport ];
+
+  # Composite build has its own patch step after it extracts the inner archives
+  postPatch = "cp ${./wsjtx.patch} wsjtx.patch";
+
+  meta = with stdenv.lib; {
+    description = "Weak-signal digital communication modes for amateur radio";
+    longDescription = ''
+      WSJT-X implements communication protocols or "modes" called FT8, JT4, JT9,
+      JT65, QRA64, ISCAT, MSK144, and WSPR, as well as one called Echo for
+      detecting and measuring your own radio signals reflected from the Moon.
+      These modes were all designed for making reliable, confirmed ham radio
+      contacts under extreme weak-signal conditions.
+    '';
+    homepage = http://physics.princeton.edu/pulsar/k1jt/wsjtx.html;
+    # Older licenses are for the statically-linked hamlib
+    license = with licenses; [ gpl3Plus gpl2Plus lgpl21Plus ];
+    platforms = platforms.linux;
+    maintainers = [ maintainers.lasandell ];
+  };
+}
diff --git a/pkgs/applications/misc/wsjtx/wsjtx.patch b/pkgs/applications/misc/wsjtx/wsjtx.patch
new file mode 100644
index 000000000000..a5bd7ec3e196
--- /dev/null
+++ b/pkgs/applications/misc/wsjtx/wsjtx.patch
@@ -0,0 +1,12 @@
+Index: wsjtx/CMakeLists.txt
+===================================================================
+--- wsjtx/CMakeLists.txt	(revision 8382)
++++ wsjtx/CMakeLists.txt	(working copy)
+@@ -866,6 +866,7 @@
+ find_package (Qt5Widgets 5 REQUIRED)
+ find_package (Qt5Multimedia 5 REQUIRED)
+ find_package (Qt5PrintSupport 5 REQUIRED)
++find_package (Qt5SerialPort 5 REQUIRED)
+ 
+ if (WIN32)
+   add_definitions (-DQT_NEEDS_QTMAIN)
diff --git a/pkgs/applications/misc/xca/default.nix b/pkgs/applications/misc/xca/default.nix
index 2d2c2e2bff25..c783985d505d 100644
--- a/pkgs/applications/misc/xca/default.nix
+++ b/pkgs/applications/misc/xca/default.nix
@@ -1,15 +1,13 @@
 { mkDerivation, lib, fetchurl, pkgconfig, which
 , libtool, openssl, qtbase, qttools }:
 
-with lib;
-
 mkDerivation rec {
   name = "xca-${version}";
-  version = "1.3.2";
+  version = "1.4.0";
 
   src = fetchurl {
     url = "mirror://sourceforge/xca/${name}.tar.gz";
-    sha256 = "1r2w9gpahjv221j963bd4vn0gj4cxmb9j42f3cd9qdn890hizw84";
+    sha256 = "1gygj6kljj3r1y0pg67mks36vfcz4vizjsqnqdvrk6zlgqjbzm7z";
   };
 
   enableParallelBuilding = true;
@@ -22,10 +20,9 @@ mkDerivation rec {
 
   meta = with lib; {
     description = "Interface for managing asymetric keys like RSA or DSA";
-    homepage = http://xca.sourceforge.net/;
-    platforms = platforms.all;
-    license = licenses.bsd3;
+    homepage    = http://xca.sourceforge.net/;
+    license     = licenses.bsd3;
     maintainers = with maintainers; [ offline peterhoeg ];
-    broken = builtins.compareVersions qtbase.version "5.7.0" == 0;
+    platforms   = platforms.all;
   };
 }
diff --git a/pkgs/applications/misc/xterm/default.nix b/pkgs/applications/misc/xterm/default.nix
index 838043881e44..d807e8eb9ed5 100644
--- a/pkgs/applications/misc/xterm/default.nix
+++ b/pkgs/applications/misc/xterm/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, xorg, ncurses, freetype, fontconfig, pkgconfig, makeWrapper
+{ stdenv, fetchurl, fetchpatch, xorg, ncurses, freetype, fontconfig, pkgconfig, makeWrapper
 , enableDecLocator ? true
 }:
 
@@ -20,7 +20,12 @@ stdenv.mkDerivation rec {
 
   patches = [
     ./sixel-256.support.patch
-  ];
+  ] ++ stdenv.lib.optional stdenv.hostPlatform.isMusl
+    (fetchpatch {
+      name = "posix-ptys.patch";
+      url = "https://git.alpinelinux.org/cgit/aports/plain/community/xterm/posix-ptys.patch?id=3aa532e77875fa1db18c7fcb938b16647031bcc1";
+      sha256 = "0czgnsxkkmkrk1idw69qxbprh0jb4sw3c24zpnqq2v76jkl7zvlr";
+    });
 
   configureFlags = [
     "--enable-wide-chars"
diff --git a/pkgs/applications/misc/yokadi/default.nix b/pkgs/applications/misc/yokadi/default.nix
new file mode 100644
index 000000000000..dec861009eb4
--- /dev/null
+++ b/pkgs/applications/misc/yokadi/default.nix
@@ -0,0 +1,30 @@
+{ stdenv, fetchurl, buildPythonApplication, dateutil,
+  sqlalchemy, setproctitle, icalendar, pycrypto }:
+
+buildPythonApplication rec {
+  pname = "yokadi";
+  version = "1.1.1";
+
+  src = fetchurl {
+    url = "https://yokadi.github.io/download/${pname}-${version}.tar.bz2";
+    sha256 = "af201da66fd3a8435b2ccd932082ab9ff13f5f2e3d6cd3624f1ab81c577aaf17";
+  };
+
+  propagatedBuildInputs = [
+    dateutil
+    sqlalchemy
+    setproctitle
+    icalendar
+    pycrypto
+  ];
+
+  # Yokadi doesn't have any tests
+  doCheck = false;
+
+  meta = with stdenv.lib; {
+    description = "A command line oriented, sqlite powered, todo-list";
+    homepage = https://yokadi.github.io/index.html;
+    license = licenses.gpl3Plus;
+    maintainers = [ maintainers.nipav ];
+  };
+}
diff --git a/pkgs/applications/misc/zathura/core/default.nix b/pkgs/applications/misc/zathura/core/default.nix
index d7a487ce3096..afb38ace1d93 100644
--- a/pkgs/applications/misc/zathura/core/default.nix
+++ b/pkgs/applications/misc/zathura/core/default.nix
@@ -1,7 +1,7 @@
 { stdenv, fetchurl, makeWrapper, pkgconfig
 , gtk, girara, ncurses, gettext, docutils
-, file, sqlite, glib, texlive
-, synctexSupport ? true
+, file, sqlite, glib, texlive, libintlOrEmpty
+, gtk-mac-integration, synctexSupport ? true
 }:
 
 assert synctexSupport -> texlive != null;
@@ -19,12 +19,17 @@ stdenv.mkDerivation rec {
 
   icon = ./icon.xpm;
 
-  nativeBuildInputs = [ pkgconfig ];
+  nativeBuildInputs = [
+    pkgconfig
+  ] ++ optional stdenv.isDarwin [ libintlOrEmpty ];
+
   buildInputs = [
     file gtk girara
     gettext makeWrapper sqlite glib
-  ] ++ optional synctexSupport texlive.bin.core;
+  ] ++ optional synctexSupport texlive.bin.core
+    ++ optional stdenv.isDarwin [ gtk-mac-integration ];
 
+  NIX_LDFLAGS = stdenv.lib.optionalString stdenv.isDarwin "-lintl";
   NIX_CFLAGS_COMPILE = "-I${glib.dev}/include/gio-unix-2.0";
 
   makeFlags = [
@@ -50,7 +55,7 @@ stdenv.mkDerivation rec {
     homepage    = http://pwmt.org/projects/zathura/;
     description = "A core component for zathura PDF viewer";
     license     = licenses.zlib;
-    platforms   = platforms.linux;
+    platforms   = platforms.unix;
     maintainers = with maintainers; [ garbas ];
   };
 }
diff --git a/pkgs/applications/misc/zathura/djvu/default.nix b/pkgs/applications/misc/zathura/djvu/default.nix
index bb573020b4e0..d280a10f6180 100644
--- a/pkgs/applications/misc/zathura/djvu/default.nix
+++ b/pkgs/applications/misc/zathura/djvu/default.nix
@@ -13,6 +13,13 @@ stdenv.mkDerivation rec {
 
   patches = [ ./gtkflags.patch ];
 
+  postPatch = stdenv.lib.optionalString stdenv.isDarwin ''
+    string1='-shared ''${LDFLAGS} -o $@ ''$(OBJECTS) ''${LIBS}'
+    string2='-Wl,-dylib_install_name,''${PLUGIN}.dylib -Wl,-bundle_loader,${zathura_core}/bin/.zathura-wrapped -bundle ''${LDFLAGS} -o $@ ''${OBJECTS} ''${LIBS}'
+    makefileC1=$(sed -r 's/\.so/.dylib/g' Makefile)
+    echo "''${makefileC1/$string1/$string2}" > Makefile
+  '';
+
   makeFlags = [ "PREFIX=$(out)" "PLUGINDIR=$(out)/lib" ];
 
   meta = with stdenv.lib; {
@@ -23,7 +30,7 @@ stdenv.mkDerivation rec {
       djvulibre library.
     '';
     license = licenses.zlib;
-    platforms = platforms.linux;
+    platforms = platforms.unix;
     maintainers = with maintainers; [ garbas ];
   };
 }
diff --git a/pkgs/applications/misc/zathura/pdf-mupdf/default.nix b/pkgs/applications/misc/zathura/pdf-mupdf/default.nix
index aca676de2136..1ca7644f60f8 100644
--- a/pkgs/applications/misc/zathura/pdf-mupdf/default.nix
+++ b/pkgs/applications/misc/zathura/pdf-mupdf/default.nix
@@ -1,5 +1,6 @@
-{ stdenv, lib, fetchurl, pkgconfig, zathura_core, gtk, girara, mupdf, openssl
-, libjpeg, jbig2dec, openjpeg, fetchpatch }:
+{ stdenv, lib, fetchurl, pkgconfig, zathura_core, gtk,
+gtk-mac-integration, girara, mupdf, openssl , libjpeg, jbig2dec,
+openjpeg, fetchpatch }:
 
 stdenv.mkDerivation rec {
   version = "0.3.2";
@@ -11,7 +12,19 @@ stdenv.mkDerivation rec {
   };
 
   nativeBuildInputs = [ pkgconfig ];
-  buildInputs = [ zathura_core gtk girara openssl mupdf libjpeg jbig2dec openjpeg ];
+
+  buildInputs = [
+    zathura_core gtk girara openssl mupdf libjpeg jbig2dec openjpeg
+  ] ++ stdenv.lib.optional stdenv.isDarwin [
+    gtk-mac-integration
+  ];
+
+  postPatch = stdenv.lib.optionalString stdenv.isDarwin ''
+    string1='-shared ''${LDFLAGS} -o $@ ''$(OBJECTS) ''${LIBS}'
+    string2='-Wl,-dylib_install_name,''${PLUGIN}.dylib -Wl,-bundle_loader,${zathura_core}/bin/.zathura-wrapped -bundle ''${LDFLAGS} -o $@ ''${OBJECTS} ''${LIBS}'
+    makefileC1=$(sed -r 's/\.so/.dylib/g' Makefile)
+    echo "''${makefileC1/$string1/$string2}" > Makefile
+  '';
 
   makeFlags = [ "PREFIX=$(out)" "PLUGINDIR=$(out)/lib" ];
 
@@ -23,7 +36,7 @@ stdenv.mkDerivation rec {
       using the mupdf rendering library.
     '';
     license = licenses.zlib;
-    platforms = platforms.linux;
+    platforms = platforms.unix;
     maintainers = with maintainers; [ cstrahan ];
   };
 }
diff --git a/pkgs/applications/misc/zathura/pdf-poppler/default.nix b/pkgs/applications/misc/zathura/pdf-poppler/default.nix
index f954d2392d76..215ebdd75640 100644
--- a/pkgs/applications/misc/zathura/pdf-poppler/default.nix
+++ b/pkgs/applications/misc/zathura/pdf-poppler/default.nix
@@ -9,11 +9,18 @@ stdenv.mkDerivation rec {
     sha256 = "1m55m7s7f8ng8a7lmcw9z4n5zv7xk4vp9n6fp9j84z6rk2imf7a2";
   };
 
-  nativeBuildInputs = [ pkgconfig ];
-  buildInputs = [ poppler zathura_core girara ];
+  nativeBuildInputs = [ pkgconfig zathura_core ];
+  buildInputs = [ poppler girara ];
 
   makeFlags = [ "PREFIX=$(out)" "PLUGINDIR=$(out)/lib" ];
 
+  postPatch = stdenv.lib.optionalString stdenv.isDarwin ''
+    string1='-shared ''${LDFLAGS} -o $@ ''$(OBJECTS) ''${LIBS}'
+    string2='-Wl,-dylib_install_name,''${PLUGIN}.dylib -Wl,-bundle_loader,${zathura_core}/bin/.zathura-wrapped -bundle ''${LDFLAGS} -o $@ ''${OBJECTS} ''${LIBS}'
+    makefileC1=$(sed -r 's/\.so/.dylib/g' Makefile)
+    echo "''${makefileC1/$string1/$string2}" > Makefile
+  '';
+
   meta = with lib; {
     homepage = http://pwmt.org/projects/zathura/;
     description = "A zathura PDF plugin (poppler)";
@@ -22,7 +29,7 @@ stdenv.mkDerivation rec {
       using the poppler rendering library.
     '';
     license = licenses.zlib;
-    platforms = platforms.linux;
+    platforms = platforms.unix;
     maintainers = with maintainers; [ cstrahan garbas ];
   };
 }
diff --git a/pkgs/applications/misc/zathura/ps/default.nix b/pkgs/applications/misc/zathura/ps/default.nix
index dd8c3a26ce1a..c324deb28e0a 100644
--- a/pkgs/applications/misc/zathura/ps/default.nix
+++ b/pkgs/applications/misc/zathura/ps/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, lib, fetchurl, pkgconfig, gtk, zathura_core, girara, libspectre, gettext }:
+{ stdenv, lib, fetchurl, pkgconfig, gtk2, zathura_core, girara, libspectre, gettext }:
 
 stdenv.mkDerivation rec {
   name = "zathura-ps-0.2.5";
@@ -9,10 +9,17 @@ stdenv.mkDerivation rec {
   };
 
   nativeBuildInputs = [ pkgconfig ];
-  buildInputs = [ libspectre gettext zathura_core gtk girara ];
+  buildInputs = [ libspectre gettext zathura_core gtk2 girara ];
 
   patches = [ ./gtkflags.patch ];
 
+  postPatch = stdenv.lib.optionalString stdenv.isDarwin ''
+    makefileC1=$(sed -r 's/\.so/.dylib/g' Makefile)
+    makefileC2=$(echo "$makefileC1" | sed 's|-shared ''${LDFLAGS} -o $@ ''$(OBJECTS) ''${LIBS}|-Wl,-dylib_install_name,''${PLUGIN}.dylib -Wl,-bundle_loader,${zathura_core}/bin/.zathura-wrapped -bundle ''${LDFLAGS} -o $@ ''${OBJECTS} ''${LIBS}|g' )
+    echo "$makefileC2" > Makefile
+    echo "$makefileC2"
+  '';
+
   makeFlags = [ "PREFIX=$(out)" "PLUGINDIR=$(out)/lib" ];
 
   meta = with lib; {
@@ -23,7 +30,7 @@ stdenv.mkDerivation rec {
       libspectre library.
       '';
     license = licenses.zlib;
-    platforms = platforms.linux;
+    platforms = platforms.unix;
     maintainers = with maintainers; [ cstrahan garbas ];
   };
 }
diff --git a/pkgs/applications/misc/zathura/wrapper.nix b/pkgs/applications/misc/zathura/wrapper.nix
index 0f12251a3df2..2fd7d58e63ed 100644
--- a/pkgs/applications/misc/zathura/wrapper.nix
+++ b/pkgs/applications/misc/zathura/wrapper.nix
@@ -11,8 +11,7 @@ in symlinkJoin {
   buildInputs = [ makeWrapper ];
 
   postBuild = ''
-    wrapProgram $out/bin/zathura \
-      --add-flags --plugins-dir=${pluginsPath}
+    wrapProgram $out/bin/zathura --add-flags --plugins-dir=${pluginsPath}
   '';
 
   meta = with lib; {
@@ -25,7 +24,7 @@ in symlinkJoin {
       as well as an easy usage that mainly focuses on keyboard interaction.
     '';
     license = licenses.zlib;
-    platforms = platforms.linux;
+    platforms = platforms.unix;
     maintainers = with maintainers;[ garbas smironov ];
   };
 }
diff --git a/pkgs/applications/networking/browsers/chromium/common.nix b/pkgs/applications/networking/browsers/chromium/common.nix
index b0ce1bb73168..bb5a7046dd49 100644
--- a/pkgs/applications/networking/browsers/chromium/common.nix
+++ b/pkgs/applications/networking/browsers/chromium/common.nix
@@ -144,9 +144,16 @@ let
       # for updated patches and hints about build flags
 
     # (gentooPatch "<patch>" "0000000000000000000000000000000000000000000000000000000000000000")
-    ] ++ optionals (versionRange "64" "65") [
+    ]  ++ optionals (versionRange "64" "65") [
       (gentooPatch "chromium-cups-r0.patch" "0hyjlfh062c8h54j4b27y4dq5yzd4w6mxzywk3s02yf6cj3cbkrl")
       (gentooPatch "chromium-angle-r0.patch" "0izdrqwsyr48117dhvwdsk8c6dkrnq2njida1q4mb1lagvwbz7gc")
+    ]  ++ optionals (versionRange "65" "66") [
+      #(gentooPatch "chromium-gcc-r0.patch" "127xdwabizn5gz8rf1qsw62i7m0b5bsfjqxv4kdbsnizmjanddf8")
+      #(gentooPatch "chromium-memcpy-r0.patch" "1d3vra59wjg2lva7ddv55ff6l57mk9k50llsplr0b7vxk0lh0ps5")
+      (gentooPatch "chromium-webrtc-r0.patch" "0qj5b4w9kav51ylpdf38vm5w7p2gx4qp8p45vrfggp7miicg9cmw")
+      #(gentooPatch "chromium-vulkan-r0.patch" "1wphsbc6kyck5qanbc4bv14iw2s67fvp1c0kwz29a2avzkz19s84")
+      #(gentooPatch "chromium-ffmpeg-r0.patch" "0j58g24j6n6vpy6v9wwv34x0dd43m52wg0xcrfkzp72km9wiahff")
+      #(gentooPatch "<patch>" "0000000000000000000000000000000000000000000000000000000000000000")
     ]  ++ optional enableWideVine ./patches/widevine.patch;
 
     postPatch = ''
diff --git a/pkgs/applications/networking/browsers/chromium/plugins.nix b/pkgs/applications/networking/browsers/chromium/plugins.nix
index 5749689bfb1f..bac4a361a19b 100644
--- a/pkgs/applications/networking/browsers/chromium/plugins.nix
+++ b/pkgs/applications/networking/browsers/chromium/plugins.nix
@@ -98,12 +98,12 @@ let
 
   flash = stdenv.mkDerivation rec {
     name = "flashplayer-ppapi-${version}";
-    version = "28.0.0.137";
+    version = "28.0.0.161";
 
     src = fetchzip {
       url = "https://fpdownload.adobe.com/pub/flashplayer/pdc/"
           + "${version}/flash_player_ppapi_linux.x86_64.tar.gz";
-      sha256 = "1776jjv2abzrwhgff8c75wm9dh3gfsihv9c5vzllhdys21zvravy";
+      sha256 = "0xhfr2mqmg71dxnsq4x716hzkryj2dmmlzgyi8hf7s999p7x8djw";
       stripRoot = false;
     };
 
diff --git a/pkgs/applications/networking/browsers/chromium/upstream-info.nix b/pkgs/applications/networking/browsers/chromium/upstream-info.nix
index 7b39eb755ef3..bc9105acc77f 100644
--- a/pkgs/applications/networking/browsers/chromium/upstream-info.nix
+++ b/pkgs/applications/networking/browsers/chromium/upstream-info.nix
@@ -1,18 +1,18 @@
 # This file is autogenerated from update.sh in the same directory.
 {
   beta = {
-    sha256 = "1ki9ii3r9iv6k7df2zr14ysm6w3fkvhvcwaw3qjm4b4q6ymznshl";
-    sha256bin64 = "0i1g0hv2vji8jx9c973x8nr1ynzsvqjaqcncxj77x6vj9wp0v41p";
-    version = "64.0.3282.140";
+    sha256 = "1ggj1a7v2n4v34kb8gx2hcswlayryr9g62zqlry26bwmvz6qzsx9";
+    sha256bin64 = "1ah8088d8p674dj5bijk5maapmiq9iap1w2i81dl0hhpyqxx3h3i";
+    version = "65.0.3325.73";
   };
   dev = {
-    sha256 = "1b3gyj55xyqsb439szisfn8c4mnpws3pfzrndrl5kgdd239qrfqz";
-    sha256bin64 = "1hmkinzn4gpikjfd8c9j30px3i0x6y8dddn9pyvjzsk6dzfcvknz";
-    version = "65.0.3325.31";
+    sha256 = "13klppyl6rbkd3ffp8y8d95l4mc72gmj45y34wynyfap6b4z1lmh";
+    sha256bin64 = "0w1ipy858p9lbpcrjhs44kncgw7c5qv1929h0w65ybgsggjqh0gz";
+    version = "66.0.3343.3";
   };
   stable = {
-    sha256 = "1ki9ii3r9iv6k7df2zr14ysm6w3fkvhvcwaw3qjm4b4q6ymznshl";
-    sha256bin64 = "1zsgcnilip9rxbs51xvnchp87gh4fmgxzrcf9dhfrnldhji17ikj";
-    version = "64.0.3282.140";
+    sha256 = "0mf4qjmrjnxs7mx9c5pymavmib7l2a2kxiy0kqk3mma1y90qnc7k";
+    sha256bin64 = "0idij274g53lzvgz9h5xxi8l841vvvr78hp25ndbmpv4a2p1d83b";
+    version = "64.0.3282.167";
   };
 }
diff --git a/pkgs/applications/networking/browsers/falkon/default.nix b/pkgs/applications/networking/browsers/falkon/default.nix
index 9356794bb5d6..90aec9831930 100644
--- a/pkgs/applications/networking/browsers/falkon/default.nix
+++ b/pkgs/applications/networking/browsers/falkon/default.nix
@@ -2,16 +2,17 @@
 , libpthreadstubs, libxcb, libXdmcp, qtsvg, qttools, qtwebengine, qtx11extras, kwallet, openssl }:
 
 stdenv.mkDerivation rec {
-  # Last qupvilla release is 2.1.2 so we add the .1 although it isn't actually a
-  # release but it is basically 2.1.2 with the falkon name
+  # KDE hasn't made a release of falkon yet so we just track git for now which is
+  # based on the most recent release of qupzilla
+  # This wip version is 2.1.99 so we add the .1
   name = "falkon-${version}.1";
-  version = "2.1.2";
+  version = "2.1.99";
 
   src = fetchFromGitHub {
     owner  = "KDE";
     repo   = "falkon";
-    rev    = "eecaf2e9d6b572a7f7d2e6dc324e3d79b61c31db";
-    sha256 = "01r5aw10jd0qz7xvad0cqzjbnsj7vwblh54wbq4x1m6xbkp6xcgy";
+    rev    = "dd3c570c41b4b3d0ad17202b78bf14cf1ac56495";
+    sha256 = "07d40cpckaprj74mr06k3mfriwb471bdmq60smls34y62ss55q9d";
   };
 
   preConfigure = ''
@@ -21,8 +22,6 @@ stdenv.mkDerivation rec {
     export FALKON_PREFIX=$out
   '';
 
-  dontUseCmakeConfigure = true;
-
   buildInputs = [
     libpthreadstubs libxcb libXdmcp
     kwallet
@@ -31,8 +30,7 @@ stdenv.mkDerivation rec {
 
   nativeBuildInputs = [ cmake extra-cmake-modules pkgconfig qmake qttools ];
 
-  # on 2.1.2: RCC: Error in 'autoscroll.qrc': Cannot find file 'locale/ar_SA.qm'
-  enableParallelBuilding = false;
+  enableParallelBuilding = true;
 
   meta = with stdenv.lib; {
     description = "QtWebEngine based cross-platform web browser";
@@ -40,6 +38,5 @@ stdenv.mkDerivation rec {
     license     = licenses.gpl3;
     maintainers = with maintainers; [ peterhoeg ];
     platforms   = platforms.unix;
-    broken      = true;
   };
 }
diff --git a/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix b/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix
index ccdbdabc7647..680ffe8382a6 100644
--- a/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix
+++ b/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix
@@ -1,975 +1,975 @@
 {
-  version = "59.0b6";
+  version = "59.0b11";
   sources = [
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/ach/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/ach/firefox-59.0b11.tar.bz2";
       locale = "ach";
       arch = "linux-x86_64";
-      sha512 = "3a18ca13a211bc1b88fb37992b3aee43c6782d2fc5032c9ca469b28561e36dea81390e1c1d5c66d5c0a7c75c18c4f0cd65da6059969123d82a46ed10654dddd7";
+      sha512 = "5e8287db112a59ccdcf9460d66d170538a312583253f3ed98c251820f75ca1de4b4ee7efbc5a9d6b6cba167d2bc451f62801bfee8bf4022cfe640312f0b5c759";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/af/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/af/firefox-59.0b11.tar.bz2";
       locale = "af";
       arch = "linux-x86_64";
-      sha512 = "db896d865820a91e6627a6b7ef55bd1e05858df0a57f7089b5695ee9bb259c9d611511c3f6429e1d090c0bf84c078c0f5a7539a40b34566df6692a55e49f5db6";
+      sha512 = "43bbad7b87c5b0043177d633bef8cf60136ab78e5f1f5c23b5d5c39dd08940f7603d997dfda84b94b5fd581d25a68f03ac71015c5fad500f6df7704c52b58520";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/an/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/an/firefox-59.0b11.tar.bz2";
       locale = "an";
       arch = "linux-x86_64";
-      sha512 = "395410c7104f398d76b69af355573c150b192fc943ef3474923f67c6d82445941b8e4908af9fe77de45f091cec3924fa62d205f3c69aa40df2dc0bd4cac10782";
+      sha512 = "80889c60222d86fe544456c54a2307033f70040edcdba8102f4e11d6be887b5e66c397b31c897f38402ef64565a6d122f7f8f894d8ea7f6180391680949d25a8";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/ar/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/ar/firefox-59.0b11.tar.bz2";
       locale = "ar";
       arch = "linux-x86_64";
-      sha512 = "c0b4943bd521ac1311a23f44c86d89d0a63d07aaa6e918576a6efd2d097801f1051eaa52d170bc84cb7d80869e7bbc89a3ea655436879854e9572094a91c3067";
+      sha512 = "bf85daa07fc424e522f9ad79a1dc849fda667342a4069cb0bb1669001cdeeb4f45811dd19f6c85dd5efcf375c66c5bc3941ff46ccfbbb5e8d1b5bfcdc99a368b";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/as/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/as/firefox-59.0b11.tar.bz2";
       locale = "as";
       arch = "linux-x86_64";
-      sha512 = "4be3a37453179f2a4784fa9df0634bd59d85dee27087d117204e6da059573c6a786a1c422ee0b7731f7fd5300b42dd42d0aaf741482f61239674ecee35e85145";
+      sha512 = "aca2c69d98b9a92592b4e8076ca6778a39f2124ad38d541940ea903c7678e5bc5bd823a596d042891e790aa19fa2aa5f98859b9c7e0e08a8c87b3ebb62314bab";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/ast/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/ast/firefox-59.0b11.tar.bz2";
       locale = "ast";
       arch = "linux-x86_64";
-      sha512 = "9949ee9172d3004dbb28fef6216b7716568f98b4b52096479cdc4c85c12b0da6fc0774c6c169103b86cb3b60d0da36ed998058e86e473213a19977c4d2bdbf8c";
+      sha512 = "5c0dd82ee28fa52cd3935553923909f4b817677b455bd36d4efb93d4669b6cb08eec56c388c4c4fdc60cca26565dc2fcbf42fc2b4b80301dc128fa3483d359cf";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/az/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/az/firefox-59.0b11.tar.bz2";
       locale = "az";
       arch = "linux-x86_64";
-      sha512 = "de5d19ea82dcbe4b53f78d33474249342ec659dcc263f44725ec92b491e9b43158809d6df87a9d6c86395e5e3fbd1e09b3bba7c5feff85c4b46438fce7318a7d";
+      sha512 = "9f2dca2a53bdd3f0ba26e7e26f4f7ce73704f023c0732c98b0c16399176af91c69bc6d6e05ed8adadc2caecbfa710bf5cd7dc638be9a7457c63e408a6da9a66d";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/be/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/be/firefox-59.0b11.tar.bz2";
       locale = "be";
       arch = "linux-x86_64";
-      sha512 = "97437da34da251863b2bf1426eacaea62845f00916d81db48220dca540195d24d1d890a60ec6ca816c0fa5d22966e2095afba03ec242059ddc0e3e297a5a3084";
+      sha512 = "2f4092f1a6fd5f0019307a6bff056f363aadccf4495718476094e8ac888b01df762d96b0b33fa48a37b8c4a85606ea1e1504a855587b8a531c405ccb0b011a23";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/bg/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/bg/firefox-59.0b11.tar.bz2";
       locale = "bg";
       arch = "linux-x86_64";
-      sha512 = "a003a5c23c011c696552ed83e0672e6a066bfac9a3aa4e13feaff472cb27e0a858b0e5986022f4c7db343ab056a2fad46176be08658f0bb595deca08ec06058a";
+      sha512 = "c0a61c4ab8615b7315edcc70eee200f742c37dfe9287fd77f58a982cabac233b00ce6725e1bb6d66194db5f1e6a4f5351041e11825ed98573e75320713638e69";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/bn-BD/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/bn-BD/firefox-59.0b11.tar.bz2";
       locale = "bn-BD";
       arch = "linux-x86_64";
-      sha512 = "404377cff86dc5fbc8db67567565cd64ce79d1a322547c70b2a210a034c5a6a0669a82e717a21fe33340f34838da2352be7615bd7752cfbd300825f161101ef5";
+      sha512 = "f6fc7d1f9a459654e2775782e0355385840ee6cf7f43d47084e5e60866d785dcff25f08a6de17d8bec8169b069566d599cd6780a3ba71458bcdfa2253b718231";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/bn-IN/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/bn-IN/firefox-59.0b11.tar.bz2";
       locale = "bn-IN";
       arch = "linux-x86_64";
-      sha512 = "dcea89eefbbef9a54002cdb85d2589511e00ba06b729574106f03447ebde36202ce70f8648de433337a3da8945c26c7834c240d64a7fd11b032c234c7e2fcaa5";
+      sha512 = "6dc654dc8c10070fcd0fbe57928a1c46bd2392fb4b85d91fc40d8537fb62fb30e67f34cd8c5f02965bad5aafef98c305693ee37858bdebced83793e819227d7c";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/br/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/br/firefox-59.0b11.tar.bz2";
       locale = "br";
       arch = "linux-x86_64";
-      sha512 = "69dce79cf9cb72dc9f32db11932b8d542aaccdd96baf4b20cb425f395580db51382cb8c48338c292ced1df5ff0a83c80bf9b7176cbd9efef69a48f3bae01f51a";
+      sha512 = "9dcb2f6eb272095ae7dbe61360187f558093147887a848e4cf1bc936d199942ee0c621e063e06ab5e73f265d59710eb162a2b86a8bbe676088fb641c69e1a50a";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/bs/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/bs/firefox-59.0b11.tar.bz2";
       locale = "bs";
       arch = "linux-x86_64";
-      sha512 = "fde4ad44e5de766ad5ebcace976f134fb1cffcb99669913e7d8ecddd986637c30cab3e06cacda26eb4bcfd4c7077d7fb6fe67a2eaf8f3c06f7d74cf322f4a5a0";
+      sha512 = "eab54247b96ac8a9c51b6f40dd12548832c802169f2159ab5e6f77427b5677d21226a7eee541e4f9beb936c4d3078d39eaf6349fce85a0c668cae75e11d1256a";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/ca/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/ca/firefox-59.0b11.tar.bz2";
       locale = "ca";
       arch = "linux-x86_64";
-      sha512 = "17373f55bb22c42b9b3fd2b82a1e8cc3258e33c924f2afbcc6f881a928e96587e76a705cada437b5ab83478b48e0fdefbff226b65efe1e94a34b1019f6e8e673";
+      sha512 = "0f1a155975a6a8103ad02c8c1c32d2401812b23e2315321b0c54c34a1f96a0dcbc6c16376e1dae6dffc747c3c9bb2ada4c755ed2d8cfe3c2bf482044d4efeba2";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/cak/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/cak/firefox-59.0b11.tar.bz2";
       locale = "cak";
       arch = "linux-x86_64";
-      sha512 = "a946c519d1e8f6e87da9524c3082248eb799e225ecafe61df145c315a9525fccc24495d148bbc081127735e301e70cb5f8ee7d44f54835d95cd0814e5b92fbd1";
+      sha512 = "3b3fff95934ca14c93a0720d641f4f7320d013d9f739a82390420cc6da38c8039d25dfad4019dd01df6efdf68a1dcea3fb34683c8ed7f2194e0b949b983a49fe";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/cs/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/cs/firefox-59.0b11.tar.bz2";
       locale = "cs";
       arch = "linux-x86_64";
-      sha512 = "4eb26d3c2c4e7122aeffc7a1ffb41f2d2ac91fb10193d0bca336f2a78f635b5644caa0c63dcdf4051d6863189c157fbc755f636570348162562478e4e743b937";
+      sha512 = "96a711881213abf84592ea646ce4804d419cd879c8ed004b8497e90478e976c536523e9aa9bc000c9deb61a0bb5ed3fee3dd8d3befb6a6ecf85956b675f11c50";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/cy/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/cy/firefox-59.0b11.tar.bz2";
       locale = "cy";
       arch = "linux-x86_64";
-      sha512 = "a55e9419142eefd3229835e028a05c75d10371ba079a092cf8c380c4c66aa8215825dc7959df52153c3ec90ae9fb15d94f212b5e8f5353efd887b5f21252eb25";
+      sha512 = "1eefeeb063198b1475553d76874914e5afb1627c991fa355c8c2ef3b1ff0566fe9145515a66cca4369ede62f12fabc4f87a6e80d191c0e4196a6760b56baeec6";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-x86_64/da/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-x86_64/da/firefox-59.0b11.tar.bz2";
       locale = "da";
       arch = "linux-x86_64";
-      sha512 = "d0f444e429feed08b6ef4d559c158ee5ecb6dc6f6e18da5b04f31e27db0bfbb35b9b5221c8308f4ff83a9a895810198298580041397e39c8538a2306ec105bc0";
+      sha512 = "e5d2c6e14230811ebe306c5f47667a8264b1cad26eddb44b44f9c3930bd31f58a9c942c5f095dec88b2df26e2bf21906f8d8564da383c19dbec117fb432219eb";
     }
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-      sha512 = "3bf50ed9c0a5a056650cb23aa4c4b598b56cce144ed1f3801e5024ffdb1f5a976614a876632ad0c4bc75e85e781be3d941496b2047e92405cab03abd5aab2bce";
+      sha512 = "e88dd7eed9882e47905d2e2a10b3d12572644eaa9d7b3ed91e6973cfcbef3a42a7ab3c4683ced33fdb89a8c5257bafbd09728c43f61a665eecb61e908cb56c5f";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-i686/sr/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-i686/sr/firefox-59.0b11.tar.bz2";
       locale = "sr";
       arch = "linux-i686";
-      sha512 = "47a1e0fd0e9fa4eff50cdd480cfbd74e1afa50cf5c5da01f38def27ad84c0c69ccca70ef3fa5fe93116154fa045e14f437220970930169ba73a376b6a9a85bbd";
+      sha512 = "ec3d240e6ad2f1052aab917c840da3afced7762e49aab68b4a131765934aeac6edeffa7dbc381890736260bda4ea5c8d189913661b2fa8b529b49c9c8611a6f8";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-i686/sv-SE/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-i686/sv-SE/firefox-59.0b11.tar.bz2";
       locale = "sv-SE";
       arch = "linux-i686";
-      sha512 = "a605236ce010d83913db4ad8061e8b3993b6cedcc3f54044796e0a0d3f073e5ce5d7587081428544efd7938eccf302190313f895f2603785cc60284c16dd7b08";
+      sha512 = "d39abc95ebf6c35abe223302c77b2ccc31f82dd111388d813344686eaa156c402df1ba7b6f80d8c4c69d4738a6159326c96d7eaf4d73740bd84dd4801bfbdb2f";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-i686/ta/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-i686/ta/firefox-59.0b11.tar.bz2";
       locale = "ta";
       arch = "linux-i686";
-      sha512 = "9b5e7e42570272989156f48dbb22b26f3dc4dfe2298c97b1ad1ed60f0def7a886c32a7260d450776653b72793dbdaf774c05198dcdb0b1a7812be9563e0666c2";
+      sha512 = "2ceed73689f05c535698f768c3ddd99046ac82117ac15010b60cb1575335c48708607ec8d173ad35096b0a04bc74bde33d1edc1d1b29e5a0a1877e2caee73c48";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-i686/te/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-i686/te/firefox-59.0b11.tar.bz2";
       locale = "te";
       arch = "linux-i686";
-      sha512 = "82dd8b225f1eb515ac4ff5b2fba68028233f773d04f119bf9e4181017692b72557c46a73a463834e8ed52a81b02f5501f5bc3af8d9eec84aedffb361b8ddbc39";
+      sha512 = "7321023b94a3cb251cca32d492e3583a50bd6ca117851848ae075b2e5f0f9d345aa5e9d26c6e1c97d06f04b663f1cea25a501d3d643eb8783aeec52dfeef857c";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-i686/th/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-i686/th/firefox-59.0b11.tar.bz2";
       locale = "th";
       arch = "linux-i686";
-      sha512 = "8b29b3b7157624d304a00238f3f49ebc9a202a818c4e6bd87596256926d0ee9047ae48db734bc6040ce6f2c94f800fc88b06a6f96788933482275c0bc1d01bbd";
+      sha512 = "6641339942984ee1e8bfbd9b5f2e70f4b1cc94520967432271e6c750081df673b06fac1012915601499074c5f8361da6eb843bc996a01b7ed85834d47db3758e";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-i686/tr/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-i686/tr/firefox-59.0b11.tar.bz2";
       locale = "tr";
       arch = "linux-i686";
-      sha512 = "727405e1d1fb9e4c84b9ddac65bd7a95c837f2ba9239220e5f4684161a2a0e25cf8fa87c5cf0d924fe0f7ed4286e7ff6ccb05fb2041796226b346066831de618";
+      sha512 = "3448b624d980caf109daef94dc037a3256c804aa2014d2d4ddd6ff4d6d2bc1588aebb0f1c7524a9572ca247ee37e835ca34df70b124142d627ba5c23db06ed47";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-i686/uk/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-i686/uk/firefox-59.0b11.tar.bz2";
       locale = "uk";
       arch = "linux-i686";
-      sha512 = "3ae3e87414e521332856a9be9b6f9a7f1df08e48779693dd4494cf950eeb89aaeb552d2819cd2c71f19f08a17fa01b092b66fa79930d9de6551161adef7391ce";
+      sha512 = "7e12823066607c5cd53e1a310fa9952760b5213a7baf0c375e107441532612a39d114b528c3d341745b45c19a808d85e21d9a326b855bc6639395f46d1833a0f";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-i686/ur/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-i686/ur/firefox-59.0b11.tar.bz2";
       locale = "ur";
       arch = "linux-i686";
-      sha512 = "3984c7f849dd16298360ee2071568dfc9a77b2650fb4cb1c6092038144a12726d912ba28eb64f4a3e3e65b8d1221044eef66aac066f66d097b63bce6f85d2b3d";
+      sha512 = "9cf39d4a2fe34a55fb3a445d2fab33e2d56710696c55f6d92e7b61e58143d6895fc43bee2271fa0631ee18e22a3d0a601ee60f4d595e26429e6cf82eeab2881f";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-i686/uz/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-i686/uz/firefox-59.0b11.tar.bz2";
       locale = "uz";
       arch = "linux-i686";
-      sha512 = "6e8ab925ac86895b870797dc5ec52019f0248a7629a22838a053f9442e120e95e16007a35063e71cd30f64b1678c6542f1b2ac96504183a1ebac2843cb455d74";
+      sha512 = "2be0c1b0c205a43bb018bf7a8e6a0b015183b8c28086f2f7475078da57d7a63b53989702b05833a32cebe3e69145510e51a2091e6529bbea13e04de017f68529";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-i686/vi/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-i686/vi/firefox-59.0b11.tar.bz2";
       locale = "vi";
       arch = "linux-i686";
-      sha512 = "caf650ee27dbaddfd098288db30541392d9f54e4818775f9a63da86db1811b3ff0f4e8547b77ac428f774fa28e6b3d873f04ae196c72df5a08dea0655f26060b";
+      sha512 = "1e7edd38f3a7f4a31d02bb2c3f2672ed505890c7909353cee82956bfa2651a66b2b4c564748a6f6da228fb2c015e3ad4da70cb40c6e680e2d7df8d9ccdbda51e";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-i686/xh/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-i686/xh/firefox-59.0b11.tar.bz2";
       locale = "xh";
       arch = "linux-i686";
-      sha512 = "655eedc85fa84d37dfaec42d53088c811c6c5c4703591e3ee5b67e6dc590d5a8c4553bd460908a004cb3d287c10c1929b528867b5b0b7d99bfb7d705d1797827";
+      sha512 = "59a5948b986d699e1eecabf3fa413fa3a1f8ef026c2546ff67ead161d577e2f66919239a002f25d21a8ee2e407b7d31b4a1c7e9e5cf63436c8e079885978c804";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-i686/zh-CN/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-i686/zh-CN/firefox-59.0b11.tar.bz2";
       locale = "zh-CN";
       arch = "linux-i686";
-      sha512 = "1c60d2929783eaadcb02e5ac30fff179a5aca67e6a8c618dda4a0696ea70a7f82b035db2b94134fa701c4f1ec1861cac664dd7ca2a4a05305f9337cf6c602146";
+      sha512 = "66bfd09feadfb609106301690276acce840779dcddbf230992654a8b542c7287448c7e03f32779ad2d3368ab346945b6c5bcb8ca521a11716ed2ccee7411e221";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b6/linux-i686/zh-TW/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/59.0b11/linux-i686/zh-TW/firefox-59.0b11.tar.bz2";
       locale = "zh-TW";
       arch = "linux-i686";
-      sha512 = "110a2e0e50e41646ebb9f601905ccacae7ca1a7028e063a671cef97828ac9637eab741fef10254aa121062fc33bb6d75f907ae7e306fe755d4f199516d1ac7ae";
+      sha512 = "120811946f1070f710ea761c1d73afab2eb8c8147c73e062982f3bff6a7898170e7b2b47c8599ee00c745e0bfb9e48c5e6b544482d38807b7047129d4c185e11";
     }
     ];
 }
diff --git a/pkgs/applications/networking/browsers/firefox-bin/devedition_sources.nix b/pkgs/applications/networking/browsers/firefox-bin/devedition_sources.nix
index 889f19994c49..c2b867beb3e9 100644
--- a/pkgs/applications/networking/browsers/firefox-bin/devedition_sources.nix
+++ b/pkgs/applications/networking/browsers/firefox-bin/devedition_sources.nix
@@ -1,975 +1,975 @@
 {
-  version = "59.0b6";
+  version = "59.0b11";
   sources = [
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-x86_64/ach/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-x86_64/ach/firefox-59.0b11.tar.bz2";
       locale = "ach";
       arch = "linux-x86_64";
-      sha512 = "595b5d322cf2472f3e6e7849a70007f501e7e4de0bf1395518c484b4e6494333949574392655ea2df9f4f00ec6b2accc95564a76791844b2ac2a3c366e2500e4";
+      sha512 = "81368baaad6be4496f71572a72eaab3f4feb9e6b75912acd8088b9532e08c90129e03ac6358fe932cda97ed709befeb961ddfb6e5e200a5cdd16f99f99c464e7";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-x86_64/af/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-x86_64/af/firefox-59.0b11.tar.bz2";
       locale = "af";
       arch = "linux-x86_64";
-      sha512 = "fa60ceb7ecf2d84211b763313a7491e5514f78f9765c55b95a213604b686e9da2d8b10c1b6d18e27553353303e00a04e5ae01365e2ca9be98fb7c6b45f531798";
+      sha512 = "bf8aad24962923522db88384ac84777b7ca50e25043c3e12cb6ef68ce526450d0a95306db42fdd3c08dcb2b9bfb48729150080616d2839e16acdd0ae548bf152";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-x86_64/an/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-x86_64/an/firefox-59.0b11.tar.bz2";
       locale = "an";
       arch = "linux-x86_64";
-      sha512 = "c9baf0badc2ec9677be906a9bd2b457987589f82f6efee189f692adc3ffc602dc961d8c539304fb63c3330064751a4bf9da7d732629181ee3ed916a656202a11";
+      sha512 = "ecab3ee9d4df2beaa6dfa1f9519b3e5dddb2a573a6fb8084db5b285987ecc88b543c006064798cfb10b66a64d44e64e388f783e590ba98ed666973e5eaef7cc9";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-x86_64/ar/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-x86_64/ar/firefox-59.0b11.tar.bz2";
       locale = "ar";
       arch = "linux-x86_64";
-      sha512 = "5c5b7762e2194b87c4b7f0fda75fe3975fbcfc28e1cc6aa5a242f319aeb95ca0da8297ad7d1c075c59cf580cca246712e88fe0b0465e09780b3a571a0ce02583";
+      sha512 = "10225de3404ccd60bcae5e283960551c16274aaaaea9695d5efa03f9e0b8eb0f52b4dd245cb6db99d11c9a3c4c614d8382a8e65348dc09fe4c2c33e02b144264";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-x86_64/as/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-x86_64/as/firefox-59.0b11.tar.bz2";
       locale = "as";
       arch = "linux-x86_64";
-      sha512 = "68ff3acc5022156676200acf9c4497c63aa5b678d7d0907207fe1171b1e0ed48da929338ceccbe841866c9e3a17d156f7da55bb2ae65d47774dad5044de4f3a7";
+      sha512 = "324df2949c740aba66fb5afe7b461c3d8efdd3f35b4dd9cffb5abed40ef9a7eb3eddf396fa3b48bf70958b6ba19e63caab1dbb5245b2c48598afca471dd635bb";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-x86_64/ast/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-x86_64/ast/firefox-59.0b11.tar.bz2";
       locale = "ast";
       arch = "linux-x86_64";
-      sha512 = "dd5e47f5477a4024ecf501e74175224c9494fd28aee3fa15dff5e04db6f72bfbcbd7514085def809481cd26e0d158de03bd02dc59c2c054ab82d8e0b18409642";
+      sha512 = "79a49e07b3deaddb575d9a00262a0d21d316fda95ce6d0968b074a18689635271eb00d43a3a9dccfc969a5fcf4a9908c4d821f2d9af972ca378b995baf75027d";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-x86_64/az/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-x86_64/az/firefox-59.0b11.tar.bz2";
       locale = "az";
       arch = "linux-x86_64";
-      sha512 = "2f78b1459d80543b7bdbd402498fd401394785dbe7d8e11bbbb04c96dea25990565b95786b2204941628f15fc8105f6ded439a00b1a0ff1d010df2e86985df87";
+      sha512 = "48b513d827ca582f137b5b12b7926cefff53313cb51961a7f256c90c8b532a81118567f7bd98f30fbe0ffe23006a2a9b5ede14d9f5ac5b1033f52f4b64c1daaf";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-x86_64/be/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-x86_64/be/firefox-59.0b11.tar.bz2";
       locale = "be";
       arch = "linux-x86_64";
-      sha512 = "b1f13f7fca082ac33fb64e177089228864a8d19e0eb02e21915126213039fa8ec6396ba514fbfa0029fdad9481dd26d513fa106553aab7be69879c93bfaa7783";
+      sha512 = "3c4494c96c798b5e4a1e5f2f07b325b006e16d7139993b8d7ba40d251d43a194adfd1a6d8378107fb5d4c5a43a5c21b6af618872cb0216f0b5bda3fa1dceb358";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-x86_64/bg/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-x86_64/bg/firefox-59.0b11.tar.bz2";
       locale = "bg";
       arch = "linux-x86_64";
-      sha512 = "73c15deb8b3f9beb26c446465388fce708b610de2735036ab6fc80cf104e9fb440c6745b497e72bccaa5a61e2dce6edbd0c69d841528d0ab4678bbba5adb296c";
+      sha512 = "a25da34be9a79dca9d2ad85ca6accf48b59f7f1bd9395f222fd39c679387c91f8a985af8fa421e0d5612998ed58c25389869102a3dd8370bafb3aa5c5f26b5c3";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-x86_64/bn-BD/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-x86_64/bn-BD/firefox-59.0b11.tar.bz2";
       locale = "bn-BD";
       arch = "linux-x86_64";
-      sha512 = "f2ba031b25cf93c7da7048c58d8bdf4d8430c42dcb082627b9b45b37ed2ef924110edb2864d876dece6a1326a3e24ff0502f51077dd96140e760ad63f858e9f4";
+      sha512 = "9e8bef3f9b8a108bbcd2f3b0312670482dc368e78c1c0616af937b13a29808a50b8f5a64bdc1bc3a7e8140790e6913220d2e4539b7a41a47582710dd077c262b";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-x86_64/bn-IN/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-x86_64/bn-IN/firefox-59.0b11.tar.bz2";
       locale = "bn-IN";
       arch = "linux-x86_64";
-      sha512 = "defa9a78675a42778b18f38ff447ef5b81d09ba54f174133913a072347d96b05c9bc637c7fa0a81014fabe7f11a49d6a366437fef37459276bcca764487c7cf3";
+      sha512 = "709a91b866e14f9567c54ce7de579426997e44510cf3f98766355bd97a1cfd4fa5cda2e1e74c56c44c8eb4defdbc3a6212d047e04940c88a81fb3e240d262f5a";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-x86_64/br/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-x86_64/br/firefox-59.0b11.tar.bz2";
       locale = "br";
       arch = "linux-x86_64";
-      sha512 = "26fd5ae4427c44565f31ceee81fab2a6d930afd603cf60342d8400133e53357f5c1b1b718ae8d8a1856aa67d1bd503a1b4527c2a1aff0d089d941f30071db251";
+      sha512 = "439330193ec220e1f34bf878d51869eb6889e8fd917080e387e308d4adac20fb3827c42afd5aa85c59408f779132c8ae1bcb9b7d50563fa53f0fea1e60c40abf";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-x86_64/bs/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-x86_64/bs/firefox-59.0b11.tar.bz2";
       locale = "bs";
       arch = "linux-x86_64";
-      sha512 = "9855150263394d24dc25f40384b756906664491c84538572d467304dbbfe9151a82a0d7aca0ac07e952ba82765c2042ee5fc4a47d541b4a8f7efd5879c4ee75b";
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-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/ru/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/ru/firefox-59.0b11.tar.bz2";
       locale = "ru";
       arch = "linux-i686";
-      sha512 = "f8e2469d3e5e0702b82bfa9528ca3811a3223c5a753d2952c8a61ef36b1997d1fb4f19ab829ce41485a75fc6fd5f1665409324706b7b1678e7191423dc2966b8";
+      sha512 = "e19dc9b21f7b29bea0ba0ef3eb5fc35eb1a9f901359fe214c41ef9c39a111d35fe715cd499ddb125dddfaba10f3b2244563fbb58604cedc4c6bf6357c06e0eac";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/si/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/si/firefox-59.0b11.tar.bz2";
       locale = "si";
       arch = "linux-i686";
-      sha512 = "d33d4ad60d2aa0e6aa0751407348c22f4975ee05ae788809acc2cbb7d23f19324138509dbd77a7fc7d4798de265f0fa4117bf4eb896204cae3695cc8c3762213";
+      sha512 = "6cddbc30cff60818077669e37bbfa9570a6111c9621a0a3ecd9d6c2724b2f7f4e2f1a656193e44d4b411af6d607d74db8eddc192e06d13e80fc14c30d53632b6";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/sk/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/sk/firefox-59.0b11.tar.bz2";
       locale = "sk";
       arch = "linux-i686";
-      sha512 = "859e5be2c7c383b02a296573e0c4f597de5c7f456febe63cef5a433a3ae7174264032d751ba39b353a4783658ba8bf382453631252579ae0259dc0d95c777b2a";
+      sha512 = "2379543aea8a76edd1fdf37fac7b214de6efbd38bac775177d4f43777df2aa35bb70cace7102cc82f5014b5121e85de0ad548845e4ac47774032f486c5f40e61";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/sl/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/sl/firefox-59.0b11.tar.bz2";
       locale = "sl";
       arch = "linux-i686";
-      sha512 = "22aa6cacf170b34e12e84f23de8a91f86c64a5e257affb47ad48dbb150c07fb704c06b87f147b272ea0ba706d2355f1237b7e8df882b0f31eb0f8af4a40d1f04";
+      sha512 = "ebe4ef7bfb6a2539a9b02b3d2acaa919136ae5d3101ff8d3f6209db2492cd79b1df6ed6bfd98ac1ecce711ce006f04e260585d184e7e066372f42986941c86d5";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/son/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/son/firefox-59.0b11.tar.bz2";
       locale = "son";
       arch = "linux-i686";
-      sha512 = "d5a1f99c78eca9edb4ce9f5d3c8cc052e013c11088f4b1de42f4af60ecf8e6ecd590318d3cb735c4042eaf4456a8218d8ba479b8164515067a917d9afd7e07e5";
+      sha512 = "066deb32e0a8884c3d10ec2a2966224e5fcd62c352bb4d33a1be0256eddd4d73f097462cab7606e3a2713bb65f0e0329d538174656676db7370f68bd8597bbc2";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/sq/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/sq/firefox-59.0b11.tar.bz2";
       locale = "sq";
       arch = "linux-i686";
-      sha512 = "ce2162089d87c0ed484670f15c8692b9f748bc9c8b5eacd1883c1930a9d1635ccd3228ab6402957563708fd31d13d509c0037a502b51628dc381a6afa787ab97";
+      sha512 = "6ffb6dd81cbaf86585ad4db5978dc115f7ce0cf150faf2e468df0d637e5ceb17454825f3fdb29b4114d24ed1fb65e6f6688c73185b5e4a733c9a1018aed7f4bb";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/sr/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/sr/firefox-59.0b11.tar.bz2";
       locale = "sr";
       arch = "linux-i686";
-      sha512 = "36a552b06f5f0e6ed2f60f40f63673706b84da9d2a6fdece3066da5497a0fb93e48d3997ead07c981cce37d59f2a3857350e3de2ef013afd8613368afe9e687d";
+      sha512 = "aa92c2bf8c5dbb9b4779677fbf841ffb2a0bf83e4505d74a6e7d8b92864eac2157bd5ab3b237fce6a1038d04590c72d371551d493ae8776b7b43415f18b74a2a";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/sv-SE/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/sv-SE/firefox-59.0b11.tar.bz2";
       locale = "sv-SE";
       arch = "linux-i686";
-      sha512 = "f75061addb23de8c846dd4a406392c05d955b161031dbc350bfa9258e0441b53d17400059c8eceff7afd646620923d50a74a46c30bac9a6dcbaaa4b438c65ed7";
+      sha512 = "accb3f5e95a869f62c80c4f36a8e522c26b35280ed053defea42c89fc0284ec42c7f25b23d7179359f9b77dd009a40189040149c3bb68d844af9f4aa90034159";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/ta/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/ta/firefox-59.0b11.tar.bz2";
       locale = "ta";
       arch = "linux-i686";
-      sha512 = "0a9a047a8985d8bf9c215d08b19be055772f7ca862141f01df78eb8cee4e9d21f39b6640c2031dab9b74c97417c13e69499bb38f3a6dcf5d57aa74b0163e82d6";
+      sha512 = "323660ec8e3e783127f81faa86381c6a38946deb090dbb94d1c27df8a2056a04d73bb95c915d67c7331bd5a72eaaf7b1deaf7885f181946dc560e2106e38dba5";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/te/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/te/firefox-59.0b11.tar.bz2";
       locale = "te";
       arch = "linux-i686";
-      sha512 = "8a74ab67a8473140a7d54f6eeed871aef3dafe98cea1f983c8dc6f0193b2ab87c6188c276299ad8c9703d35afe6d99c2da3314d764ddfb24b19ea792adf06d92";
+      sha512 = "bcb8887e396ad68fe8543a90a83cbac88c5e73b450e134a658ae29b52eb4c930af0a25682535367a08bfe29b942cd57a7f1c1a3cb1eced97c7c1f148c991555c";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/th/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/th/firefox-59.0b11.tar.bz2";
       locale = "th";
       arch = "linux-i686";
-      sha512 = "0c0250960e85cb1521dccb9cc1dcab81a69b8979822acb425fcbfb6b891ed10eab377180fd2bb992da9612803f90e5238e009be9bd8704782e315f4778e3224a";
+      sha512 = "aedb446c60aabef0851ce249178ca43a1e7e908660d1c2391d9565346c7dbbe9f2bc7b15a1f0c1bcd3bba35dcab1872035121143af9593748c5ece81eaf9671d";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/tr/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/tr/firefox-59.0b11.tar.bz2";
       locale = "tr";
       arch = "linux-i686";
-      sha512 = "a09aa8abf7cd3da53b079ecb31925c0b9d29defcc79a59fa7d0d0cee7f9e2e797ad396afea73aa567a63c5a282682afb60494d96751e387fec01a271d43c02e6";
+      sha512 = "ad62e59b5aa4278df0e5127da5bcdac63d68032e0a77e666973c01c936057756b888b04916eeaa5be3aef2d953d0e5ff84f17dde3bd8521e68451e5bb9f05c05";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/uk/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/uk/firefox-59.0b11.tar.bz2";
       locale = "uk";
       arch = "linux-i686";
-      sha512 = "3ef5452b3ebeb18585780b315851a0bc666e3fd6f70ed0d12f7b2a3c1db8c4ce98c15b73491d89f600f9066d1a2cf110bc3f974efe7f8cbc44db9d00f8783654";
+      sha512 = "bd07b0d5813452b98e9d1c5985b628ada4a2904703b9a2239a89a0f277a7f7d9e2e4db66ab32a988dd7f95f56be3bf09db68964f57c1e8a0a24e8eae44b7359e";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/ur/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/ur/firefox-59.0b11.tar.bz2";
       locale = "ur";
       arch = "linux-i686";
-      sha512 = "571235d2376472bcf4bce379fa066d6d671d21f3edf87088552be4daeae5dbd8f5674878f5bf5c8f47bbfe3bb6d0e08d53e0d683c69e655a94bf39eae10df4c2";
+      sha512 = "ef7e8108b27e106073b838ec09b4d0abebcabdeb288a62855be0d076cc481278006f7cfe3ff79ac38ef125157eb06645f44d56fec200d4b1b0ae238da4c16312";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/uz/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/uz/firefox-59.0b11.tar.bz2";
       locale = "uz";
       arch = "linux-i686";
-      sha512 = "e3e3490431e88e7ad326526f1415feeeeb1f6db788d3fd1c5788a90aea015121c62ae6aa2697e490dd39bc1c67442ecd1bae9a6cdec8162bd389b72b0cf35f75";
+      sha512 = "73f23a0b9d0bbdbff8fe2d8461442b83d0f8d36e95c46b65b6dac257d2a62ade8aad71401d3bdca3c65b59f794ea9a918205c4b5887e7e1e63756d5133464337";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/vi/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/vi/firefox-59.0b11.tar.bz2";
       locale = "vi";
       arch = "linux-i686";
-      sha512 = "d507fdbfdfde7eea5139ede5528d343bc4e993268d92f710c6bce409eb1c983ed83e2b97630b982fa525eceb020a34e7b4f63f3764fea11d3b0e8f95ce25e04f";
+      sha512 = "48e8c0f5d28f527b2a3f979dfdeebc39efcde646d146e4ca6cc3b35a827019b16c31a841582594179dfadec7a933ff0da0e4d35e2b8f2c50dee0c5260228b723";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/xh/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/xh/firefox-59.0b11.tar.bz2";
       locale = "xh";
       arch = "linux-i686";
-      sha512 = "1eec3a1e2a4d64c4f28e1145f1ea76b477bcd12e394c1bb6f9e776ef3d8fa288d7daf377945b84189f6d6def6725d4b176db54bb4132ddbb63ad20ba8227aab5";
+      sha512 = "5da170e2a95e38c20fd5d130eaf097d19a166c6f66c90d770460dd520dce89a62b368a818202fff3ba35b7740ce75b775eb5a792de529c81ff4bd08edb75bed2";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/zh-CN/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/zh-CN/firefox-59.0b11.tar.bz2";
       locale = "zh-CN";
       arch = "linux-i686";
-      sha512 = "7e9ca87faad561adacc86fc89fde2d16d4e68f07e88bea28bca692244045664c888c6d8ebfd8aa4d29e9c2b368dc7d5706d3f622ec720f9e5e5ef9529722f3b1";
+      sha512 = "7a07ce7713d66358852cda20fb6ccca921e7255bd35c9ee8383de6fbc70b978042916b7ec86b44fdb93908ff5e01df581fb0ba68d5e7999f31968966fd901922";
     }
-    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b6/linux-i686/zh-TW/firefox-59.0b6.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/devedition/releases/59.0b11/linux-i686/zh-TW/firefox-59.0b11.tar.bz2";
       locale = "zh-TW";
       arch = "linux-i686";
-      sha512 = "e9a95b406bf91651c8efb22ea569a5e2bf056a18ae7fb9a2bd472416b1e26100b3fb1fa9132cf1b96c228b585c30e3f158ffae1ef8dd272408afffa4283a18d1";
+      sha512 = "1ac549170fa1cb76b5dc2924577b1ec1af482d47822ec1451d3bdcefaa345381f7637b77989fad1d369c2218c01ae0294c1a105c637f327d378725e19273d771";
     }
     ];
 }
diff --git a/pkgs/applications/networking/browsers/firefox-bin/release_sources.nix b/pkgs/applications/networking/browsers/firefox-bin/release_sources.nix
index 2221100f21c1..0fbe6d749c2f 100644
--- a/pkgs/applications/networking/browsers/firefox-bin/release_sources.nix
+++ b/pkgs/applications/networking/browsers/firefox-bin/release_sources.nix
@@ -1,965 +1,965 @@
 {
-  version = "58.0.1";
+  version = "58.0.2";
   sources = [
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-x86_64/ach/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-x86_64/ach/firefox-58.0.2.tar.bz2";
       locale = "ach";
       arch = "linux-x86_64";
-      sha512 = "7b32498fed47b1e0a58b399436c54ccb784a870ec0e8ab7f789218b17a168d0968666bb01abb456c4d0f6350a7769e05eaf2a3a6a5f3827a42725bf7704ac941";
+      sha512 = "4f974e90d5db09a02c61a634f7309ba479f8699d1d61f4c21a7bb6ae5f520332292031ce0988605f8e727da5161de1b3a055da59d5f8bf220c1b369f9c453f17";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-x86_64/af/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-x86_64/af/firefox-58.0.2.tar.bz2";
       locale = "af";
       arch = "linux-x86_64";
-      sha512 = "12ca5365ea453af0ad4cd4c296c05b3dd99e713e46aa618544573c1023a7e1b6596d91d90fd9bd5a6a332624d985637bb12ffab20548dc808c5dccc0909e3fae";
+      sha512 = "d821bf5c1fa1bc38f64195d1bfbc7ce5205b50139710fde6e1db37c4a429a0df16ede8411a618d8e339f369dac699a38651c3aec9952d7c20fb84e1eaf1f59de";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-x86_64/an/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-x86_64/an/firefox-58.0.2.tar.bz2";
       locale = "an";
       arch = "linux-x86_64";
-      sha512 = "7da1af63fdfa939724aac8c9def9b179bd2fdb37f2034e9758f4578a682c22bcd0803fc2e67412d2339b722eb269cffa96863b819d6e390ac01009152b00c90e";
+      sha512 = "7238e49735bab7983a478c217b128d7cc8b07e90fc5e2739eaf07e35be054a354c5c0006bae6fdb29ef71855c33ea531e84c1617832412315eb2e07ad7310d14";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-x86_64/ar/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-x86_64/ar/firefox-58.0.2.tar.bz2";
       locale = "ar";
       arch = "linux-x86_64";
-      sha512 = "1e2d9ae0ce968803b6ea6fdf9841328a561c90576a5849e3ef1e89a6f5ea0aa70b2179ca0c04fd89b829ce21f45d3eecdca607a07d64e6c16a8aa06cda8333ec";
+      sha512 = "f505930eed9262e595a8969dc86ed43c04f32ba62301b2fa8d1246ef956f3075d5633112e6129707ddb02d3047b93a5c9f5ce16f958a06ad928c59d64c8a1e75";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-x86_64/as/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-x86_64/as/firefox-58.0.2.tar.bz2";
       locale = "as";
       arch = "linux-x86_64";
-      sha512 = "c40af34a01fe616e0924993b267cbf498a21962f77139b5aecebd6e1b6d17464685c44f435a18be018a00761e40ff3473a205d55c111be954f379ff6540645c9";
+      sha512 = "e1b876dee0ac09a391c53f066f5bf56fa6b0b4bcb389beb0844670a7f14ff422a230f58389f3c3d2a1f8b7486fe528a7abbe3b6abfb86c330ea13cab0cc67a7f";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-x86_64/ast/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-x86_64/ast/firefox-58.0.2.tar.bz2";
       locale = "ast";
       arch = "linux-x86_64";
-      sha512 = "81898690a8c7bbeddc0c89a2e6c91082e37016d86815a79b2488adc36cbea3c0b669221fa9951e4fe4880f777c5c0be9e9728549d01c77e592c8b1afdb4a629d";
+      sha512 = "1c47fae696cfcbdd4f7fbbc8ddeacbfa1ae1b9a624bec9f512527b99c7ddd63c99fd55b60ae9a3ea1104fb5b943c8c029b19b93e6426de793788c2a5354a0d57";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-x86_64/az/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-x86_64/az/firefox-58.0.2.tar.bz2";
       locale = "az";
       arch = "linux-x86_64";
-      sha512 = "73ff9c0be45cd7d5f70abcb8e397e9adc777383b793a78c6907396724c78f9fea5794a8a138c9c19f2d0ab46a0133da69f6e5c98a15a8b120567c22bebefcd27";
+      sha512 = "5c3bab4ba81967b957c14152f6461ccb129396562ece07a34644f88b67185f9d6639ce3bd709a463816efe531c6e8bf3aa6414828feb37ae54564d1c9ae237fc";
     }
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       locale = "pt-BR";
       arch = "linux-i686";
-      sha512 = "c77a8c87942045b959058319fcccc35ff8d054842fc8d7332171f110e82595886746597614ec4884915ba8397c63ebce597dbab648d2f823a1fd803f8c662382";
+      sha512 = "5cfe1e7d703cfa42a1033df3509db3e91788160079c9396d55356b3c7f0b848b59e6a8f704866dd14f2f0714e89830ad541da615c7d4209249ccc46b01eb11ee";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/pt-PT/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/pt-PT/firefox-58.0.2.tar.bz2";
       locale = "pt-PT";
       arch = "linux-i686";
-      sha512 = "6c09645104219be720c843f3065617184ac5731f354d4217347c662d2cc7cf66060b7805e16b032914f20e75ebddc72de06c3f7b520656bf7d5afd9c4ca517d1";
+      sha512 = "124ce2632b461e53b2cd3474e4fbcb92554006bee72498356886a451800a15d91ffe32ac87451b61d32e6f9d60b04dd14f4ba081a535124c7e2816edc11ac287";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/rm/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/rm/firefox-58.0.2.tar.bz2";
       locale = "rm";
       arch = "linux-i686";
-      sha512 = "a232ea477b7b0841eb5dce7efb722b81da8136ec974bbdd7739d0700b163953f0b07e9509b973afa3c09af75b0b08523fe94dee21aec919f40f57e2ffd9dd6f3";
+      sha512 = "847f41ff0293f82425bfba1af30deb4858c066f738f0f9d3db5303092406358e9b11f6207ed732903b860f60c1c1b1f622c5c1d2113eed073d70d039dac4a6bd";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/ro/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/ro/firefox-58.0.2.tar.bz2";
       locale = "ro";
       arch = "linux-i686";
-      sha512 = "887a70aa19415abe5bb2bb10f4e66e293177713612186567e9691b715e8b7b7ec3487509a111e8d9053241bc74d1bc9bcbf930931a14050b7c8b513076ed385d";
+      sha512 = "ccd5ac724cd810dec2e1ddb3e48139d9f5768d56ded09c0e6576c0dae898df310a4c5815635f646c0aa91caaad696c0ec6338bf21dacde33b4675f320fb4bca8";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/ru/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/ru/firefox-58.0.2.tar.bz2";
       locale = "ru";
       arch = "linux-i686";
-      sha512 = "efb8f8746d07a387d094e23c10f8a2ae3697e854b26a9ec78013f4fb2284a359bfa6cac686779fb8e1d72114c59e191f86240f02b61f4c748909dfcea45368a3";
+      sha512 = "d003f707e4a481ddaeab11dffccbc46d0d7173afb081a5007b3efbb6e1ce8d081a4eb23017b87d7e22fc3741e117bdcddbd2393b578bae2d07a2c2c2bbe2d0a9";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/si/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/si/firefox-58.0.2.tar.bz2";
       locale = "si";
       arch = "linux-i686";
-      sha512 = "9b469c23762a85e1f536928d78df87da8cf2661f78e5a558d8caeaf504ef7ae54c54eb2c3b6ea00381fc2e83348e9f403bd1c106cb518148ebccd113b5e5f442";
+      sha512 = "80e0e8c1ee6483a5b70140e4a6c0eb694f24dbce0a638700866ea8759063bba3f42c33ffaf465c7e8266fc764fe2983a2d6b098356dc6f4420eff9089c22331a";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/sk/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/sk/firefox-58.0.2.tar.bz2";
       locale = "sk";
       arch = "linux-i686";
-      sha512 = "1ff839d7c631fba2510534032345fcf6397f694d035daff179382270a7889b6c2046b4b2bd6d7666c6e298146ef47cc9fac2b7c525d7c8f563b58b7fe11a5dea";
+      sha512 = "9aec4b3085ac757137a8ead6829bee1ae26cc02a494f60a3aa44daa56f5cbe1201c7588a60682b3bdccccad75782bade43d092352c015213e5f16212f9fb2800";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/sl/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/sl/firefox-58.0.2.tar.bz2";
       locale = "sl";
       arch = "linux-i686";
-      sha512 = "766e06e574d0f4933f8bf3e50521b5025915797f25712a29f0961759410272fda59aeb869d4d84cad961b277f5fc8ec78b8c333ee0e60e52e07fbb99822973b7";
+      sha512 = "2dc5d855eaedd125f8a3d828d85bc12ae47123f2f4be2bbf1e262c678cbd2607ee48c61e6fa70402da5e7ad549e2580e7d9a0a696e89ac5fee1da2154443f289";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/son/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/son/firefox-58.0.2.tar.bz2";
       locale = "son";
       arch = "linux-i686";
-      sha512 = "60df99153af07b88fd888b232b570eeeb4cafe01ed1c85cd536774b03e121523689d6de3fa3d6335fe7e0c9534273ce571d7a3fa00034e1681b78f4012a8fe7b";
+      sha512 = "7a1c4f86a4e459e80725b250b3a54be7c78397bd909c7a2081723571378578b7e672af380305ff9dae714e911fb209833833fd7cb3fb8a850f9d6a3b14f41cba";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/sq/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/sq/firefox-58.0.2.tar.bz2";
       locale = "sq";
       arch = "linux-i686";
-      sha512 = "97263478fbeeada0ff397723bd8c4e0935c88c25cfc259bb2906e8d0a2ecce8101f4cb5ea9457b8b0b3276de475e0a8fbe995faa1edb33ced17b98404ac1021b";
+      sha512 = "45d20dcd82c6648c0429dfa0009aaf2d807efb7e9468ded4491a04dced5957d3bc9c1491c09c7f85ea63991283e2c38b2c906ebb338dffba1d0db4748e56246a";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/sr/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/sr/firefox-58.0.2.tar.bz2";
       locale = "sr";
       arch = "linux-i686";
-      sha512 = "b822f5077378b3c41951aafed6f6b3ab174d9240058d69a05905803c2b8ab74791abfc1ce59550585f0eca9fd97e3c0325c9bfeef47d14b8eca039959ebbbd1c";
+      sha512 = "799f0548e18cbf77a6daf6ec0f9c12e904fde3235e9d8a5564e06df45bc037f4a04de0f5bfb9e74f9fa7053e8fc7b39b5c55b03dba5e78cf4e1400c033077f5f";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/sv-SE/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/sv-SE/firefox-58.0.2.tar.bz2";
       locale = "sv-SE";
       arch = "linux-i686";
-      sha512 = "20555a59e733f49b3714cd4517aa952a0e9306681f5ea1f33d9464ee50705187ad0e745ebfa00a64e4cd0aac4d7c3c3257cf04681e74e18037684e675b05df7b";
+      sha512 = "c2c693ab974b4c26a0c786955cff61f3b0689bd272b00fe4cbdbd7701a57481724f0ebf8aeb8427c7b50f4419875e9ca10d79c534c0e3ca8db132bcf6436e013";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/ta/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/ta/firefox-58.0.2.tar.bz2";
       locale = "ta";
       arch = "linux-i686";
-      sha512 = "2d5721bc3519b766dc70163b8f91988b49512e4709d998239691c382a006bb06fd82b793fce843f976a55cffa8a0ff06711917e35233629945539c1f27453d02";
+      sha512 = "0771a9cbb44102291142fab34dbfd704461da5c6c013b48c1ee22cd7cc92ebfaad7ccac5b87bf764489d66e8cec2e4056e9fcd62c3ddb734753a48022f7f8914";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/te/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/te/firefox-58.0.2.tar.bz2";
       locale = "te";
       arch = "linux-i686";
-      sha512 = "28ff1470be8a12212ef2467daa9a363ef929fe8f6741678b5d17ccfa149b122bc2dd74478bb96e721725c87d6a3000878dd7b51d1e38e6242e6e286c3621b25f";
+      sha512 = "699d8d52cc8e1bac02fbca3caa6504a028100d76fc9fe2492dfe214c5a96f0d3425bf541d2873133dd00e501dcc9d27894e613c44fc3cf9adedc0e08104524f6";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/th/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/th/firefox-58.0.2.tar.bz2";
       locale = "th";
       arch = "linux-i686";
-      sha512 = "935a7354cca219695f58592b1d6668ee3d305559ad9c30cfc274b63952bb133429528e38bda10d5cdeddb428133712da74ba621e2c831ae14329c22530f9ff91";
+      sha512 = "13cf7e1740ab2f508983617ce27f991db8049070061cb4d31299b372a801abf7292edd185fafc73dd58c46d009c32a6b5103a77834b2ddb0cc420cd98f747e9b";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/tr/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/tr/firefox-58.0.2.tar.bz2";
       locale = "tr";
       arch = "linux-i686";
-      sha512 = "9f30bcd90b0c5ae5b55dc74a1e4adf8b029d8b87ba4f2961a4eb47ff4c61decff4abfac4f4664f1e99653f05a1749a17c775ba323ac322ec1fe3e104a4c57cc0";
+      sha512 = "a3439d157762eddcc1c09c4b687028b97004ac49144a3f26ea2a05a8eccc0a8b04659147ae7e8972ac16299d262586cc1d0c1bc69e5a309a0c82086cf61202ac";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/uk/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/uk/firefox-58.0.2.tar.bz2";
       locale = "uk";
       arch = "linux-i686";
-      sha512 = "eca33af02a5f2d7363688aa2636d407822dfe9b70fa003d085ca6b9c3089adb49d080204c5e94d89178ff952dc5ca6a9402446610eb3e4460e55cdb066b965e3";
+      sha512 = "7767a4549265131e29a142c6f2a914b8699f2042a9da5831192668300acc564fbfe94009b3ea33a7bedc469a7585029685fa91dc752b46d7d7be5425776bc7c4";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/ur/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/ur/firefox-58.0.2.tar.bz2";
       locale = "ur";
       arch = "linux-i686";
-      sha512 = "6dc7bb3693fa86305bb50be09c7945f199450c286867f56e66721944a27894e3de7a6452801ef4d04b0339403900b46effb7d2282a81c0b042ccf4c49f758a47";
+      sha512 = "b85f5c3067cf897079ff1de7c0de84756fb2224f703ec6825108efff52bed3a6e780b8410a58ed756e926a6033cd10c888743642f997b9c9d7390096c3b5e7c9";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/uz/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/uz/firefox-58.0.2.tar.bz2";
       locale = "uz";
       arch = "linux-i686";
-      sha512 = "1ab8b3aefedc0c50c76169c0890cc5e3c381b7f743bb901c5573103761ae67985deae20ac2ef5b5d0f85f848a82a8d60bc87336205e462ddd2f040ba3586f258";
+      sha512 = "3febb16ceabdcf7395196f1aef6c5ecc6a09f45e63485207816e95dd5ec0ac9729c3644b8afa75d68241ad203459239bd7f5693c6d8aa7e59afb1a1f661015ff";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/vi/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/vi/firefox-58.0.2.tar.bz2";
       locale = "vi";
       arch = "linux-i686";
-      sha512 = "cca1d12e5f34b78f930d7b7b53afce55567be0e9e6894b2af1d20a5c2c11df0531d06945d812bec956904fbd3ecb4921c282f8a9a520661c4988d2147d370dd8";
+      sha512 = "d117eca28279af133e2dde8dc25d3f7c4dcdc97f683f4570aa9cb8965200dfd8799271958ed6113b9bee488fc3e17d772b1aa4a4d657a49f72914890752af13c";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/xh/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/xh/firefox-58.0.2.tar.bz2";
       locale = "xh";
       arch = "linux-i686";
-      sha512 = "8ed571a58fe104ef53aa785d10481371adcdf4a38f449bdbc65f6ab532797d9c4d301f6f75868645aca291cdc10ae3b5b8d2fd1f8f116f9ef21b9d91e4264f24";
+      sha512 = "4ce7c4627a7db67ebe85ddb134cadca8cc4ecd3a01d8895dcb8b691f85e01911818404cc7243b4f5e1df0133a204a1ce5289168cae0b7e1b0b2674a659fc6684";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/zh-CN/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/zh-CN/firefox-58.0.2.tar.bz2";
       locale = "zh-CN";
       arch = "linux-i686";
-      sha512 = "ca63b214cdd67857d69ba86263e3efeadddbfc0f35a6c13ba9308959bc158d481cd6930246f3b59b7c335399ccfcfe5fbbff5fd1cd62aa1316c1da96403dfae8";
+      sha512 = "d0a73f00af50d70b055a1b2e89dc942b56d8d6e3a297407060a88a994dfcbd52fd60ec221e3afd9b6036500d27d861415ab0b25ceb443210321823e4e3b189e2";
     }
-    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.1/linux-i686/zh-TW/firefox-58.0.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/firefox/releases/58.0.2/linux-i686/zh-TW/firefox-58.0.2.tar.bz2";
       locale = "zh-TW";
       arch = "linux-i686";
-      sha512 = "35bcec66fb184dddc9aab83fd91c561c396b6ae48bb9e027e4a64aa7aa60fd264ce4da917255370736ffb08fc42362bba61844ee0295c6b7adf721fb70d93136";
+      sha512 = "a855e8de90b5b26e8d4fed05b48c5efd6626c9d793f30c1f0b71d9b062a4e253b8c417a44e581ea8edd7babf5bd536b4384dd494dbb2fa36d7f585e555cdd655";
     }
     ];
 }
diff --git a/pkgs/applications/networking/browsers/firefox/common.nix b/pkgs/applications/networking/browsers/firefox/common.nix
index 91b86a18375c..69e935d78762 100644
--- a/pkgs/applications/networking/browsers/firefox/common.nix
+++ b/pkgs/applications/networking/browsers/firefox/common.nix
@@ -59,7 +59,7 @@
 , enableOfficialBranding ? true
 }:
 
-assert stdenv.cc ? libc && stdenv.cc.libc != null;
+assert stdenv.cc.libc or null != null;
 
 let
   flag = tf: x: [(if tf then "--enable-${x}" else "--disable-${x}")];
@@ -100,29 +100,25 @@ stdenv.mkDerivation (rec {
     rm -f configure
     rm -f js/src/configure
     rm -f .mozconfig*
+  '' + (if lib.versionAtLeast version "58"
+  # this will run autoconf213
+  then ''
+    configureScript="$(realpath ./mach) configure"
+  '' else ''
+    make -f client.mk configure-files
+    configureScript="$(realpath ./configure)"
+  '') + ''
+    cxxLib=$( echo -n ${gcc}/include/c++/* )
+    archLib=$cxxLib/$( ${gcc}/bin/gcc -dumpmachine )
 
- '' + lib.optionalString (stdenv.lib.versionAtLeast version "58.0.0") ''
-    cat >.mozconfig <<END_MOZCONFIG
-    ${lib.concatStringsSep "\n" (map (flag: "ac_add_options ${flag}") configureFlags)}
-    ${lib.optionalString googleAPISupport "ac_add_options --with-google-api-keyfile=$TMPDIR/ga"}
-    END_MOZCONFIG
+    test -f layout/style/ServoBindings.toml && sed -i -e '/"-DMOZ_STYLO"/ a , "-cxx-isystem", "'$cxxLib'", "-isystem", "'$archLib'"' layout/style/ServoBindings.toml
   '' + lib.optionalString googleAPISupport ''
     # Google API key used by Chromium and Firefox.
     # Note: These are for NixOS/nixpkgs use ONLY. For your own distribution,
     # please get your own set of keys.
     echo "AIzaSyDGi15Zwl11UNe6Y-5XW_upsfyw31qwZPI" > $TMPDIR/ga
     configureFlagsArray+=("--with-google-api-keyfile=$TMPDIR/ga")
-  '' + ''
-    # this will run autoconf213
-    ${if (stdenv.lib.versionAtLeast version "58.0.0") then "./mach configure" else "make -f client.mk configure-files"}
-
-    configureScript="$(realpath ./configure)"
-
-    cxxLib=$( echo -n ${gcc}/include/c++/* )
-    archLib=$cxxLib/$( ${gcc}/bin/gcc -dumpmachine )
-
-    test -f layout/style/ServoBindings.toml && sed -i -e '/"-DMOZ_STYLO"/ a , "-cxx-isystem", "'$cxxLib'", "-isystem", "'$archLib'"' layout/style/ServoBindings.toml
-
+  '' + lib.optionalString (lib.versionOlder version "58") ''
     cd obj-*
   '';
 
@@ -150,12 +146,12 @@ stdenv.mkDerivation (rec {
     "--disable-gconf"
     "--enable-default-toolkit=cairo-gtk${if gtk3Support then "3" else "2"}"
   ]
-  ++ lib.optionals (stdenv.lib.versionAtLeast version "56" && !stdenv.hostPlatform.isi686) [
+  ++ lib.optionals (lib.versionAtLeast version "56" && !stdenv.hostPlatform.isi686) [
     # on i686-linux: --with-libclang-path is not available in this configuration
     "--with-libclang-path=${llvmPackages.libclang}/lib"
     "--with-clang-path=${llvmPackages.clang}/bin/clang"
   ]
-  ++ lib.optionals (stdenv.lib.versionAtLeast version "57") [
+  ++ lib.optionals (lib.versionAtLeast version "57") [
     "--enable-webrender=build"
   ]
 
@@ -196,6 +192,16 @@ stdenv.mkDerivation (rec {
   ++ lib.optional enableOfficialBranding "--enable-official-branding"
   ++ extraConfigureFlags;
 
+  # Before 58 we have to run `make -f client.mk configure-files` at
+  # the top level, and then run `./configure` in the obj-* dir (see
+  # above), but in 58 we have to instead run `./mach configure` at the
+  # top level and then run `make` in obj-*. (We can also run the
+  # `make` at the top level in 58, but then we would have to `cd` to
+  # `make install` anyway. This is ugly, but simple.)
+  postConfigure = lib.optionalString (lib.versionAtLeast version "58") ''
+    cd obj-*
+  '';
+
   preBuild = lib.optionalString (enableOfficialBranding && isTorBrowserLike) ''
     buildFlagsArray=("MOZ_APP_DISPLAYNAME=Tor Browser")
   '';
diff --git a/pkgs/applications/networking/browsers/firefox/packages.nix b/pkgs/applications/networking/browsers/firefox/packages.nix
index 930f0877412d..44f4b014d70b 100644
--- a/pkgs/applications/networking/browsers/firefox/packages.nix
+++ b/pkgs/applications/networking/browsers/firefox/packages.nix
@@ -6,18 +6,29 @@ rec {
 
   firefox = common rec {
     pname = "firefox";
-    version = "58.0.1";
+    version = "58.0.2";
     src = fetchurl {
       url = "mirror://mozilla/firefox/releases/${version}/source/firefox-${version}.source.tar.xz";
-      sha512 = "08xgv1qm2xx5wjczqg1ldf0yqm939zsghhr4acbkwnymv5apfak3vx0kcr9iwqkmdqjdjmggxz439kjn510f92fik33zjfsjn7sd9k5";
+      sha512 = "ff748780492fc66b3e44c7e7641f16206e4c09514224c62d37efac2c59877bdf428a3670bfb50407166d7b505d4e2ea020626fd776b87f6abb6bc5d2e54c773f";
     };
 
-    patches =
-      [ ./no-buildconfig.patch ./env_var_for_system_dir.patch ]
-      ++ lib.optional stdenv.isi686 (fetchpatch {
-        url = "https://hg.mozilla.org/mozilla-central/raw-rev/15517c5a5d37";
-        sha256 = "1ba487p3hk4w2w7qqfxgv1y57vp86b8g3xhav2j20qd3j3phbbn7";
-      });
+    patches = [
+      ./no-buildconfig.patch
+      ./env_var_for_system_dir.patch
+
+      # https://bugzilla.mozilla.org/show_bug.cgi?id=1430274
+      # Scheduled for firefox 59
+      (fetchpatch {
+        url = "https://bug1430274.bmoattachments.org/attachment.cgi?id=8943426";
+        sha256 = "12yfss3k61yilrb337dh2rffy5hh83d2f16gqrf5i56r9c33f7hf";
+      })
+
+      # https://bugzilla.mozilla.org/show_bug.cgi?id=1388981
+      # Should have been fixed in firefox 57
+    ] ++ lib.optional stdenv.isi686 (fetchpatch {
+      url = "https://hg.mozilla.org/mozilla-central/raw-rev/15517c5a5d37";
+      sha256 = "1ba487p3hk4w2w7qqfxgv1y57vp86b8g3xhav2j20qd3j3phbbn7";
+    });
 
     meta = {
       description = "A web browser built from Firefox source tree";
@@ -99,44 +110,42 @@ rec {
 
 in rec {
 
-  tor-browser-6-5 = common (rec {
+  tor-browser-7-0 = common (rec {
     pname = "tor-browser";
-    version = "6.5.2";
+    version = "7.0.1";
     isTorBrowserLike = true;
-    extraConfigureFlags = [ "--disable-loop" ];
 
     # FIXME: fetchFromGitHub is not ideal, unpacked source is >900Mb
     src = fetchFromGitHub {
       owner = "SLNOS";
-      repo = "tor-browser";
-      # branch "tor-browser-45.8.0esr-6.5-2-slnos"
-      rev = "e4140ea01b9906934f0347e95f860cec207ea824";
-      sha256 = "0a1qk3a9a3xxrl56bp4zbknbchv5x17k1w5kgcf4j3vklcv6av60";
+      repo  = "tor-browser";
+      # branch "tor-browser-52.5.0esr-7.0-1-slnos";
+      rev   = "830ff8d622ef20345d83f386174f790b0fc2440d";
+      sha256 = "169mjkr0bp80yv9nzza7kay7y2k03lpnx71h4ybcv9ygxgzdgax5";
     };
-  } // commonAttrs) {
-    stdenv = overrideCC stdenv gcc5;
-    ffmpegSupport = false;
-    gssSupport = false;
-  };
 
-  tor-browser-7-0 = common (rec {
+    patches =
+      [ ./env_var_for_system_dir.patch ];
+  } // commonAttrs) {};
+
+  tor-browser-7-5 = common (rec {
     pname = "tor-browser";
-    version = "7.0.1";
+    version = "7.5.2";
     isTorBrowserLike = true;
 
     # FIXME: fetchFromGitHub is not ideal, unpacked source is >900Mb
     src = fetchFromGitHub {
       owner = "SLNOS";
       repo  = "tor-browser";
-      # branch "tor-browser-52.5.0esr-7.0-1-slnos";
-      rev   = "830ff8d622ef20345d83f386174f790b0fc2440d";
-      sha256 = "169mjkr0bp80yv9nzza7kay7y2k03lpnx71h4ybcv9ygxgzdgax5";
+      # branch "tor-browser-52.6.2esr-7.5-2-slnos";
+      rev   = "cf1a504aaa26af962ae909a3811c0038db2d2eec";
+      sha256 = "0llbk7skh1n7yj137gv7rnxfasxsnvfjp4ss7h1fbdnw19yba115";
     };
 
     patches =
       [ ./env_var_for_system_dir.patch ];
   } // commonAttrs) {};
 
-  tor-browser = tor-browser-7-0;
+  tor-browser = tor-browser-7-5;
 
 })
diff --git a/pkgs/applications/networking/browsers/firefox/wrapper.nix b/pkgs/applications/networking/browsers/firefox/wrapper.nix
index 010f60881b5b..12ea714fb234 100644
--- a/pkgs/applications/networking/browsers/firefox/wrapper.nix
+++ b/pkgs/applications/networking/browsers/firefox/wrapper.nix
@@ -71,7 +71,7 @@ let
             ++ lib.optionals (cfg.enableQuakeLive or false)
             (with xorg; [ stdenv.cc libX11 libXxf86dga libXxf86vm libXext libXt alsaLib zlib libudev ])
             ++ lib.optional (enableAdobeFlash && (cfg.enableAdobeFlashDRM or false)) hal-flash
-            ++ lib.optional (config.pulseaudio or false) libpulseaudio;
+            ++ lib.optional (config.pulseaudio or true) libpulseaudio;
       gst-plugins = with gst_all; [ gst-plugins-base gst-plugins-good gst-plugins-bad gst-plugins-ugly gst-ffmpeg ];
       gtk_modules = [ libcanberra_gtk2 ];
 
diff --git a/pkgs/applications/networking/browsers/google-chrome/default.nix b/pkgs/applications/networking/browsers/google-chrome/default.nix
index b1b1132f22b0..17c285d9bdf7 100644
--- a/pkgs/applications/networking/browsers/google-chrome/default.nix
+++ b/pkgs/applications/networking/browsers/google-chrome/default.nix
@@ -5,6 +5,7 @@
 , libXcursor, libXext, libXfixes, libXrender, libXScrnSaver, libXcomposite, libxcb
 , alsaLib, libXdamage, libXtst, libXrandr, expat, cups
 , dbus_libs, gtk2, gtk3, gdk_pixbuf, gcc-unwrapped, at_spi2_atk
+, kerberos
 
 # command line arguments which are always set e.g "--disable-gpu"
 , commandLineArgs ? ""
@@ -57,6 +58,7 @@ let
     liberation_ttf curl utillinux xdg_utils wget
     flac harfbuzz icu libpng opusWithCustomModes snappy speechd
     bzip2 libcap at_spi2_atk
+    kerberos
   ] ++ optional pulseSupport libpulseaudio
     ++ [ gtk ];
 
diff --git a/pkgs/applications/networking/browsers/mozilla-plugins/flashplayer/default.nix b/pkgs/applications/networking/browsers/mozilla-plugins/flashplayer/default.nix
index 614f55d01d6d..dc9c33585526 100644
--- a/pkgs/applications/networking/browsers/mozilla-plugins/flashplayer/default.nix
+++ b/pkgs/applications/networking/browsers/mozilla-plugins/flashplayer/default.nix
@@ -73,7 +73,7 @@ let
 in
 stdenv.mkDerivation rec {
   name = "flashplayer-${version}";
-  version = "28.0.0.137";
+  version = "28.0.0.161";
 
   src = fetchurl {
     url =
@@ -84,14 +84,14 @@ stdenv.mkDerivation rec {
     sha256 =
       if debug then
         if arch == "x86_64" then
-          "1hj3sfrspdkhq967fmnpgamgiq90k263cqfas94gp3dzslmkingw"
+          "0dsgq39c2d0kkdcd9j4nddqn3qiq5pvm2r67ji4m4wyv9chn518m"
         else
-          "1v4k6hzngm23xwxnh6ngplp2m0ga480sbcm668bpcj61krmi6xy4"
+          "0x26qi9qr01rppji5l4nwvmrhmq6qy83dsppbb7jqjmgyvknq5jd"
       else
         if arch == "x86_64" then
-          "0ijmrk6262a1xcf98g94vdlqxnik9f7igjy08j3a2i4b5bikq479"
+          "1s62gx2a9q962w3gc847x2xwlzkq4dkzbmvf74x5k5c2k2l9hhg0"
         else
-          "10a17dba4zy29padvi3fnv2s8v71q698ffqjp8ggsla42pjyhvkh";
+          "1m5pcgz2w9f3jkm3hpvysc8ap20y458xnba7j51d7h7fjy6md89x";
   };
 
   nativeBuildInputs = [ unzip ];
diff --git a/pkgs/applications/networking/browsers/mozilla-plugins/flashplayer/standalone.nix b/pkgs/applications/networking/browsers/mozilla-plugins/flashplayer/standalone.nix
index d5c4f993d8ba..4528dd70cbd3 100644
--- a/pkgs/applications/networking/browsers/mozilla-plugins/flashplayer/standalone.nix
+++ b/pkgs/applications/networking/browsers/mozilla-plugins/flashplayer/standalone.nix
@@ -55,7 +55,7 @@ let
 in
 stdenv.mkDerivation rec {
   name = "flashplayer-standalone-${version}";
-  version = "28.0.0.137";
+  version = "28.0.0.161";
 
   src = fetchurl {
     url =
@@ -65,9 +65,9 @@ stdenv.mkDerivation rec {
         "https://fpdownload.macromedia.com/pub/flashplayer/updaters/28/flash_player_sa_linux.x86_64.tar.gz";
     sha256 =
       if debug then
-        "0xr3hf828sm0xdnmk2kavxmvzc6m0mw369khrxyfwrbxvdsibwn8"
+        "0934vs3c51fjz9pr846wg9xn7h2qybswayfkhz0pnzcfnng2rrf1"
       else
-        "1wr0avjpshrj51svb1sfnshz39xxla1brqs8pbcgfgyqjh350rgn";
+        "0pwi7pbfldiqiwc7yfy7psyr93679r025vjxmiybs2ap69vly4v0";
   };
 
   nativeBuildInputs = [ unzip ];
diff --git a/pkgs/applications/networking/browsers/otter/default.nix b/pkgs/applications/networking/browsers/otter/default.nix
new file mode 100644
index 000000000000..93cf220e4996
--- /dev/null
+++ b/pkgs/applications/networking/browsers/otter/default.nix
@@ -0,0 +1,25 @@
+{ stdenv, cmake, openssl, gst_all_1, fetchFromGitHub
+, qtbase, qtmultimedia, qtwebengine
+, version ? "0.9.94"
+, sourceSha ? "19mfm0f6qqkd78aa6q4nq1y9gnlasqiyk68zgqjp1i03g70h08k5"
+}:
+stdenv.mkDerivation {
+  name = "otter-browser-${version}";
+
+  src = fetchFromGitHub {
+    owner = "OtterBrowser";
+    repo = "otter-browser";
+    rev = "v${version}";
+    sha256 = sourceSha;
+  };
+
+  nativeBuildInputs = [ cmake ];
+
+  buildInputs = [ qtbase qtmultimedia qtwebengine ];
+
+  meta = with stdenv.lib; {
+    license = licenses.gpl3Plus;
+    description = "Browser aiming to recreate the best aspects of the classic Opera (12.x) UI using Qt5";
+    maintainers = with maintainers; [ lheckemann ];
+  };
+}
diff --git a/pkgs/applications/networking/browsers/palemoon/default.nix b/pkgs/applications/networking/browsers/palemoon/default.nix
index 006aa88f363c..cd4f95097889 100644
--- a/pkgs/applications/networking/browsers/palemoon/default.nix
+++ b/pkgs/applications/networking/browsers/palemoon/default.nix
@@ -10,14 +10,14 @@
 
 stdenv.mkDerivation rec {
   name = "palemoon-${version}";
-  version = "27.6.2";
+  version = "27.7.2";
 
   src = fetchFromGitHub {
     name   = "palemoon-src";
     owner  = "MoonchildProductions";
     repo   = "Pale-Moon";
     rev    = version + "_Release";
-    sha256 = "0ickxrwl36iyqj3v9qq6hnfl2y652f2ppwi949pfh4f6shm9x0ri";
+    sha256 = "19ki6gp6bhcvhjnclalviiyp93mqsgc22xjl0gm9x5y4sxdb5wlq";
   };
 
   desktopItem = makeDesktopItem {
@@ -101,10 +101,20 @@ stdenv.mkDerivation rec {
 
   meta = with stdenv.lib; {
     description = "A web browser";
+    longDescription = ''
+      Pale Moon is an Open Source, Goanna-based web browser focusing on
+      efficiency and customization.
+
+      Pale Moon offers you a browsing experience in a browser completely built
+      from its own, independently developed source that has been forked off from
+      Firefox/Mozilla code a number of years ago, with carefully selected
+      features and optimizations to improve the browser's stability and user
+      experience, while offering full customization and a growing collection of
+      extensions and themes to make the browser truly your own.
+    '';
     homepage    = https://www.palemoon.org/;
     license     = licenses.mpl20;
-    maintainers = with maintainers; [ rnhmjoj ];
+    maintainers = with maintainers; [ rnhmjoj AndersonTorres ];
     platforms   = platforms.linux;
   };
-
 }
diff --git a/pkgs/applications/networking/browsers/vivaldi/default.nix b/pkgs/applications/networking/browsers/vivaldi/default.nix
index 00db16a8cf16..2612df3efcff 100644
--- a/pkgs/applications/networking/browsers/vivaldi/default.nix
+++ b/pkgs/applications/networking/browsers/vivaldi/default.nix
@@ -4,7 +4,7 @@
 , freetype, fontconfig, libXft, libXrender, libxcb, expat, libXau, libXdmcp
 , libuuid, xz
 , gstreamer, gst-plugins-base, libxml2
-, glib, gtk3, pango, gdk_pixbuf, cairo, atk, gnome3
+, glib, gtk3, pango, gdk_pixbuf, cairo, atk, at_spi2_atk, gnome3
 , nss, nspr
 , patchelf, makeWrapper
 , proprietaryCodecs ? false, vivaldi-ffmpeg-codecs ? null
@@ -13,11 +13,11 @@
 stdenv.mkDerivation rec {
   name = "${product}-${version}";
   product = "vivaldi";
-  version = "1.13.1008.34-1";
+  version = "1.14.1077.45-1";
 
   src = fetchurl {
     url = "https://downloads.vivaldi.com/stable/${product}-stable_${version}_amd64.deb";
-    sha256 = "18p5n87n5rkd6dhdsf2lvcyhg6ipn0k4p6a79dy93vsgjmk4bvw2";
+    sha256 = "0b4iviar927jx6xqyrzgzb3p4p617zm4an1np8jnldadq2a0p56d";
   };
 
   unpackPhase = ''
@@ -30,7 +30,7 @@ stdenv.mkDerivation rec {
   buildInputs = [
     stdenv.cc.cc stdenv.cc.libc zlib libX11 libXt libXext libSM libICE libxcb
     libXi libXft libXcursor libXfixes libXScrnSaver libXcomposite libXdamage libXtst libXrandr
-    atk alsaLib dbus_libs cups gtk3 gdk_pixbuf libexif ffmpeg systemd
+    atk at_spi2_atk alsaLib dbus_libs cups gtk3 gdk_pixbuf libexif ffmpeg systemd
     freetype fontconfig libXrender libuuid expat glib nss nspr
     gstreamer libxml2 gst-plugins-base pango cairo gnome3.gconf
   ] ++ stdenv.lib.optional proprietaryCodecs vivaldi-ffmpeg-codecs;
diff --git a/pkgs/applications/networking/browsers/w3m/default.nix b/pkgs/applications/networking/browsers/w3m/default.nix
index 83819761e9bb..c71ccdf8a0d2 100644
--- a/pkgs/applications/networking/browsers/w3m/default.nix
+++ b/pkgs/applications/networking/browsers/w3m/default.nix
@@ -53,8 +53,12 @@ stdenv.mkDerivation rec {
 
   hardeningDisable = [ "format" ];
 
-  configureFlags = "--with-ssl=${openssl.dev} --with-gc=${boehmgc.dev}"
-    + optionalString graphicsSupport " --enable-image=${optionalString x11Support "x11,"}fb";
+  configureFlags =
+    [ "--with-ssl=${openssl.dev}" "--with-gc=${boehmgc.dev}" ]
+    ++ optionals (stdenv.buildPlatform != stdenv.hostPlatform) [
+      "ac_cv_func_setpgrp_void=yes"
+    ]
+    ++ optional graphicsSupport "--enable-image=${optionalString x11Support "x11,"}fb";
 
   preConfigure = ''
     substituteInPlace ./configure --replace "/lib /usr/lib /usr/local/lib /usr/ucblib /usr/ccslib /usr/ccs/lib /lib64 /usr/lib64" /no-such-path
diff --git a/pkgs/applications/networking/cluster/flink/default.nix b/pkgs/applications/networking/cluster/flink/default.nix
index bc8684da7679..48308d3a2012 100644
--- a/pkgs/applications/networking/cluster/flink/default.nix
+++ b/pkgs/applications/networking/cluster/flink/default.nix
@@ -7,6 +7,13 @@ let
       flinkVersion = "1.3.2";
       scalaVersion = "2.11";
       sha256 = "0mf4qz0963bflzidgslvwpdlvj9za9sj20dfybplw9lhd4sf52rp";
+      hadoopBundle = "-hadoop27";
+    };
+    "1.4" = {
+      flinkVersion = "1.4.0";
+      scalaVersion = "2.11";
+      sha256 = "0d80djx1im3h8mf60qzi12km1bbik8a5l3nks85jzi0r0xzfgkm6";
+      hadoopBundle = "";
     };
   };
 in
@@ -17,7 +24,7 @@ stdenv.mkDerivation rec {
   name = "flink-${flinkVersion}";
 
   src = fetchurl {
-    url = "mirror://apache/flink/${name}/${name}-bin-hadoop27-scala_${scalaVersion}.tgz";
+    url = "mirror://apache/flink/${name}/${name}-bin${hadoopBundle}-scala_${scalaVersion}.tgz";
     inherit sha256;
   };
 
diff --git a/pkgs/applications/networking/cluster/helm/default.nix b/pkgs/applications/networking/cluster/helm/default.nix
index 408019eeb4b2..082b23afcbd0 100644
--- a/pkgs/applications/networking/cluster/helm/default.nix
+++ b/pkgs/applications/networking/cluster/helm/default.nix
@@ -1,13 +1,13 @@
-{ stdenv, fetchurl, kubernetes }:
+{ stdenv, fetchurl, kubectl }:
 let
   arch = if stdenv.isLinux
          then "linux-amd64"
          else "darwin-amd64";
   checksum = if stdenv.isLinux
-             then "9f04c4824fc751d6c932ae5b93f7336eae06e78315352aa80241066aa1d66c49"
-             else "5058142bcd6e16b7e01695a8f258d27ae0b6469caf227ddf6aa2181405e6aa8e";
+             then "07bgny8mfdgv9f6zmk31hxhkwy90wr22js21jz679pkz3gmykxvx"
+             else "1f6h96gyhsdb03am586kdqn619h4niwlj29j4bypf3yg2sar4p6x";
   pname = "helm";
-  version = "2.7.2";
+  version = "2.8.1";
 in
 stdenv.mkDerivation {
   name = "${pname}-${version}";
@@ -21,7 +21,7 @@ stdenv.mkDerivation {
 
   buildInputs = [ ];
 
-  propagatedBuildInputs = [ kubernetes ];
+  propagatedBuildInputs = [ kubectl ];
 
   phases = [ "buildPhase" "installPhase" ];
 
diff --git a/pkgs/applications/networking/cluster/kubecfg/default.nix b/pkgs/applications/networking/cluster/kubecfg/default.nix
index 7f17bd57c194..73a28325f52d 100644
--- a/pkgs/applications/networking/cluster/kubecfg/default.nix
+++ b/pkgs/applications/networking/cluster/kubecfg/default.nix
@@ -1,6 +1,6 @@
 { lib, buildGoPackage, fetchFromGitHub, ... }:
 
-let version = "0.5.0"; in
+let version = "0.6.0"; in
 
 buildGoPackage {
   name = "kubecfg-${version}";
@@ -9,7 +9,7 @@ buildGoPackage {
     owner = "ksonnet";
     repo = "kubecfg";
     rev = "v${version}";
-    sha256 = "1s8w133p8qkj3dr73jimajm9ddp678lw9k9symj8rjw5p35igr93";
+    sha256 = "12kv1p707kdxjx5l8rcikd1gjwp5xjxdmmyvlpnvyagrphgrwpsf";
   };
 
   goPackagePath = "github.com/ksonnet/kubecfg";
diff --git a/pkgs/applications/networking/cluster/kubernetes/default.nix b/pkgs/applications/networking/cluster/kubernetes/default.nix
index e8686ade5900..e2f431e2a5e5 100644
--- a/pkgs/applications/networking/cluster/kubernetes/default.nix
+++ b/pkgs/applications/networking/cluster/kubernetes/default.nix
@@ -8,8 +8,6 @@
     "cmd/kube-controller-manager"
     "cmd/kube-proxy"
     "plugin/cmd/kube-scheduler"
-    "federation/cmd/federation-apiserver"
-    "federation/cmd/federation-controller-manager"
     "test/e2e/e2e.test"
   ]
 }:
@@ -18,13 +16,13 @@ with lib;
 
 stdenv.mkDerivation rec {
   name = "kubernetes-${version}";
-  version = "1.7.9";
+  version = "1.9.1";
 
   src = fetchFromGitHub {
     owner = "kubernetes";
     repo = "kubernetes";
     rev = "v${version}";
-    sha256 = "0lxagvv8mysw6n0vp5vsccl87b628dgsjrf298dx2dqx7wn7zjgi";
+    sha256 = "1dmq2g138h7fsswmq4l47b44gsl9anmm3ywqyi7y48f1rkvc11mk";
   };
 
   buildInputs = [ removeReferencesTo makeWrapper which go rsync go-bindata ];
diff --git a/pkgs/applications/networking/cluster/panamax/api/default.nix b/pkgs/applications/networking/cluster/panamax/api/default.nix
index 6a8fe2834912..1c2e2ccac27b 100644
--- a/pkgs/applications/networking/cluster/panamax/api/default.nix
+++ b/pkgs/applications/networking/cluster/panamax/api/default.nix
@@ -64,6 +64,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = with stdenv.lib; {
+    broken = true; # needs ruby 2.1
     homepage = https://github.com/CenturyLinkLabs/panamax-api;
     description = "The API behind The Panamax UI";
     license = licenses.asl20;
diff --git a/pkgs/applications/networking/cluster/panamax/ui/default.nix b/pkgs/applications/networking/cluster/panamax/ui/default.nix
index 4a6481e3e5ee..2f60942f014b 100644
--- a/pkgs/applications/networking/cluster/panamax/ui/default.nix
+++ b/pkgs/applications/networking/cluster/panamax/ui/default.nix
@@ -62,6 +62,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = with stdenv.lib; {
+    broken = true; # needs ruby 2.1
     homepage = https://github.com/CenturyLinkLabs/panamax-ui;
     description = "The Web GUI for Panamax";
     license = licenses.asl20;
diff --git a/pkgs/applications/networking/cluster/terraform-landscape/Gemfile b/pkgs/applications/networking/cluster/terraform-landscape/Gemfile
new file mode 100644
index 000000000000..c4f9a5511de9
--- /dev/null
+++ b/pkgs/applications/networking/cluster/terraform-landscape/Gemfile
@@ -0,0 +1,2 @@
+source 'https://rubygems.org'
+gem 'terraform_landscape'
diff --git a/pkgs/applications/networking/cluster/terraform-landscape/Gemfile.lock b/pkgs/applications/networking/cluster/terraform-landscape/Gemfile.lock
new file mode 100644
index 000000000000..047ddaadad07
--- /dev/null
+++ b/pkgs/applications/networking/cluster/terraform-landscape/Gemfile.lock
@@ -0,0 +1,25 @@
+GEM
+  remote: https://rubygems.org/
+  specs:
+    colorize (0.8.1)
+    commander (4.4.4)
+      highline (~> 1.7.2)
+    diffy (3.2.0)
+    highline (1.7.10)
+    polyglot (0.3.5)
+    terraform_landscape (0.1.17)
+      colorize (~> 0.7)
+      commander (~> 4.4)
+      diffy (~> 3.0)
+      treetop (~> 1.6)
+    treetop (1.6.9)
+      polyglot (~> 0.3)
+
+PLATFORMS
+  ruby
+
+DEPENDENCIES
+  terraform_landscape
+
+BUNDLED WITH
+   1.14.6
diff --git a/pkgs/applications/networking/cluster/terraform-landscape/default.nix b/pkgs/applications/networking/cluster/terraform-landscape/default.nix
new file mode 100644
index 000000000000..a0dca341ff3e
--- /dev/null
+++ b/pkgs/applications/networking/cluster/terraform-landscape/default.nix
@@ -0,0 +1,19 @@
+{ lib, bundlerEnv, ruby }:
+
+bundlerEnv rec {
+  name = "terraform-landscape-${version}";
+
+  version = (import gemset).terraform_landscape.version;
+  inherit ruby;
+  gemfile = ./Gemfile;
+  lockfile = ./Gemfile.lock;
+  gemset = ./gemset.nix;
+
+  meta = with lib; {
+    description = "Improve Terraform's plan output to be easier to read and understand";
+    homepage    = https://github.com/coinbase/terraform-landscape;
+    license     = with licenses; apsl20;
+    maintainers = with maintainers; [ mbode ];
+    platforms   = platforms.unix;
+  };
+}
diff --git a/pkgs/applications/networking/cluster/terraform-landscape/gemset.nix b/pkgs/applications/networking/cluster/terraform-landscape/gemset.nix
new file mode 100644
index 000000000000..38321b9d37aa
--- /dev/null
+++ b/pkgs/applications/networking/cluster/terraform-landscape/gemset.nix
@@ -0,0 +1,61 @@
+{
+  colorize = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "133rqj85n400qk6g3dhf2bmfws34mak1wqihvh3bgy9jhajw580b";
+      type = "gem";
+    };
+    version = "0.8.1";
+  };
+  commander = {
+    dependencies = ["highline"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "165yr8qzan3gnk241mnwxsvdfwp6p1afg13z0mqdily6lh95acl9";
+      type = "gem";
+    };
+    version = "4.4.4";
+  };
+  diffy = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "015nn9zaciqj43mfpjlw619r5dvnfkrjcka8nsa6j260v6qya941";
+      type = "gem";
+    };
+    version = "3.2.0";
+  };
+  highline = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "01ib7jp85xjc4gh4jg0wyzllm46hwv8p0w1m4c75pbgi41fps50y";
+      type = "gem";
+    };
+    version = "1.7.10";
+  };
+  polyglot = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1bqnxwyip623d8pr29rg6m8r0hdg08fpr2yb74f46rn1wgsnxmjr";
+      type = "gem";
+    };
+    version = "0.3.5";
+  };
+  terraform_landscape = {
+    dependencies = ["colorize" "commander" "diffy" "treetop"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "1bx8nfqbpxb2hnxnnl1m4sq6jlzf451c85m047jfq04b6w9691fl";
+      type = "gem";
+    };
+    version = "0.1.17";
+  };
+  treetop = {
+    dependencies = ["polyglot"];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0sdkd1v2h8dhj9ncsnpywmqv7w1mdwsyc5jwyxlxwriacv8qz8bd";
+      type = "gem";
+    };
+    version = "1.6.9";
+  };
+}
\ No newline at end of file
diff --git a/pkgs/applications/networking/cluster/terraform/providers/default.nix b/pkgs/applications/networking/cluster/terraform/providers/default.nix
index 72da1dd77d57..40117b458550 100644
--- a/pkgs/applications/networking/cluster/terraform/providers/default.nix
+++ b/pkgs/applications/networking/cluster/terraform/providers/default.nix
@@ -11,6 +11,10 @@ let
         inherit owner repo sha256;
         rev = "v${version}";
       };
+
+      # Terraform allow checking the provider versions, but this breaks
+      # if the versions are not provided via file paths.
+      postBuild = "mv go/bin/${repo}{,_v${version}}";
     };
 
   maybeDrv = name: data:
diff --git a/pkgs/applications/networking/droopy/default.nix b/pkgs/applications/networking/droopy/default.nix
index 93ff39bde64f..62fe4e2e662e 100644
--- a/pkgs/applications/networking/droopy/default.nix
+++ b/pkgs/applications/networking/droopy/default.nix
@@ -25,7 +25,7 @@ stdenv.mkDerivation rec {
     description = "Mini Web server that let others upload files to your computer";
     homepage = http://stackp.online.fr/droopy;
     license = licenses.bsd3;
-    maintainers = [ maintainers.profpatsch ];
+    maintainers = [ maintainers.Profpatsch ];
   };
 
 }
diff --git a/pkgs/applications/networking/feedreaders/rss2email/default.nix b/pkgs/applications/networking/feedreaders/rss2email/default.nix
index 99517b478c32..4152c2772e10 100644
--- a/pkgs/applications/networking/feedreaders/rss2email/default.nix
+++ b/pkgs/applications/networking/feedreaders/rss2email/default.nix
@@ -14,16 +14,34 @@ buildPythonApplication rec {
     sha256 = "02wj9zhmc2ym8ba1i0z9pm1c622z2fj7fxwagnxbvpr1402ahmr5";
   };
 
+  outputs = [ "out" "man" "doc" ];
+
+  postPatch = ''
+    # sendmail executable is called from PATH instead of sbin by default
+    sed -e 's|/usr/sbin/sendmail|sendmail|' \
+        -i rss2email/config.py
+  '';
+
   postInstall = ''
-    install -Dm 644 r2e.1 $out/share/man/man1/r2e.1
+    install -Dm 644 r2e.1 $man/share/man/man1/r2e.1
     # an alias for better finding the manpage
-    ln -s -T r2e.1 $out/share/man/man1/rss2email.1
+    ln -s -T r2e.1 $man/share/man/man1/rss2email.1
+
+    # copy documentation
+    mkdir -p $doc/share/doc/rss2email
+    cp AUTHORS COPYING CHANGELOG README $doc/share/doc/rss2email/
   '';
 
+  # The tests currently fail, see
+  # https://github.com/rss2email/rss2email/issues/14
+  # postCheck = ''
+  #   env PYTHONPATH=.:$PYTHONPATH python ./test/test.py
+  # '';
+
   meta = with lib; {
     description = "A tool that converts RSS/Atom newsfeeds to email.";
     homepage = https://pypi.python.org/pypi/rss2email;
     license = licenses.gpl2;
-    maintainers = with maintainers; [ jb55 profpatsch ];
+    maintainers = with maintainers; [ jb55 Profpatsch ];
   };
 }
diff --git a/pkgs/applications/networking/flexget/default.nix b/pkgs/applications/networking/flexget/default.nix
index 105239aca024..585e0c847da2 100644
--- a/pkgs/applications/networking/flexget/default.nix
+++ b/pkgs/applications/networking/flexget/default.nix
@@ -75,5 +75,6 @@ buildPythonApplication rec {
     description = "Multipurpose automation tool for content like torrents";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ domenkozar tari ];
+    broken = true; # as of 2018-02-09
   };
 }
diff --git a/pkgs/applications/networking/gns3/server.nix b/pkgs/applications/networking/gns3/server.nix
index 3fd7317ef6c2..24050314c413 100644
--- a/pkgs/applications/networking/gns3/server.nix
+++ b/pkgs/applications/networking/gns3/server.nix
@@ -4,6 +4,16 @@
 
 let
   pythonPackages = python3Packages;
+  aiohttp = (stdenv.lib.overrideDerivation pythonPackages.aiohttp
+    (oldAttrs:
+      rec {
+        pname = "aiohttp";
+        version = "2.3.10";
+        src = pythonPackages.fetchPypi {
+          inherit pname version;
+          sha256 = "8adda6583ba438a4c70693374e10b60168663ffa6564c5c75d3c7a9055290964";
+        };
+      }));
   aiohttp-cors = (stdenv.lib.overrideDerivation pythonPackages.aiohttp-cors
     (oldAttrs:
       rec {
@@ -14,6 +24,10 @@ let
           inherit pname version;
           sha256 = "11b51mhr7wjfiikvj3nc5s8c7miin2zdhl3yrzcga4mbpkj892in";
         };
+        propagatedBuildInputs = [ aiohttp ]
+          ++ stdenv.lib.optional
+               (pythonPackages.pythonOlder "3.5")
+               pythonPackages.typing;
       }));
 in pythonPackages.buildPythonPackage rec {
   name = "${pname}-${version}";
diff --git a/pkgs/applications/networking/instant-messengers/dino/default.nix b/pkgs/applications/networking/instant-messengers/dino/default.nix
index bfe4e9708e3d..35cb2100254b 100644
--- a/pkgs/applications/networking/instant-messengers/dino/default.nix
+++ b/pkgs/applications/networking/instant-messengers/dino/default.nix
@@ -13,13 +13,13 @@
  }:
 
 stdenv.mkDerivation rec {
-  name = "dino-unstable-2017-12-03";
+  name = "dino-unstable-2018-02-11";
 
   src = fetchFromGitHub {
     owner = "dino";
     repo = "dino";
-    rev = "cee39b0117c1620d852d50c14ca6f06db4e2956b";
-    sha256 = "15cm6y2rgj6fcw8sciygd1wvcw7k9fgf69ji1abfwybzydflj7ny";
+    rev = "5436d716c0f508eb8ab70f322da862f996ce421e";
+    sha256 = "0yxkhl9xm5f0j2i9vxgyabpa5fwja0329fmg0878mqsm89nzz3am";
     fetchSubmodules = true;
   };
 
diff --git a/pkgs/applications/networking/instant-messengers/gajim/default.nix b/pkgs/applications/networking/instant-messengers/gajim/default.nix
index b01c6497fb23..42c510495574 100644
--- a/pkgs/applications/networking/instant-messengers/gajim/default.nix
+++ b/pkgs/applications/networking/instant-messengers/gajim/default.nix
@@ -1,9 +1,6 @@
 { stdenv, fetchurl, autoreconfHook, python, intltool, pkgconfig, libX11
 , ldns, pythonPackages
 
-# Test requirements
-, xvfb_run
-
 , enableJingle ? true, farstream ? null, gst-plugins-bad ? null
 ,                      libnice ? null
 , enableE2E ? true
@@ -25,13 +22,13 @@ with stdenv.lib;
 
 stdenv.mkDerivation rec {
   name = "gajim-${version}";
-  version = "0.16.8";
+  version = "0.16.9";
 
   src = fetchurl {
     name = "${name}.tar.bz2";
     url = "https://dev.gajim.org/gajim/gajim/repository/archive.tar.bz2?"
         + "ref=${name}";
-    sha256 = "009cpzqh4zy7hc9pq3r5m4lgagwawhjab13rjzavb0n9ggijcscb";
+    sha256 = "121dh906zya9n7npyk7b5xama0z3ycy9jl7l5jm39pc86h1winh3";
   };
 
   patches = let
@@ -46,8 +43,7 @@ stdenv.mkDerivation rec {
     name = "gajim-${name}.patch";
     url = "https://dev.gajim.org/gajim/gajim/commit/${rev}.diff";
     inherit sha256;
-  }) cherries)
-    ++ [./fix-tests.patch]; # https://dev.gajim.org/gajim/gajim/issues/8660
+  }) cherries);
 
   postPatch = ''
     sed -i -e '0,/^[^#]/ {
@@ -74,8 +70,6 @@ stdenv.mkDerivation rec {
 
   nativeBuildInputs = [
     autoreconfHook pythonPackages.wrapPython intltool pkgconfig
-    # Test dependencies
-    xvfb_run
   ];
 
   autoreconfPhase = ''
@@ -114,9 +108,8 @@ stdenv.mkDerivation rec {
 
   doInstallCheck = true;
   installCheckPhase = ''
-    XDG_DATA_DIRS="$out/share/gajim''${XDG_DATA_DIRS:+:}$XDG_DATA_DIRS" \
     PYTHONPATH="test:$out/share/gajim/src:''${PYTHONPATH:+:}$PYTHONPATH" \
-      xvfb-run make test
+      make test_nogui
   '';
 
   enableParallelBuilding = true;
diff --git a/pkgs/applications/networking/instant-messengers/gajim/fix-tests.patch b/pkgs/applications/networking/instant-messengers/gajim/fix-tests.patch
deleted file mode 100644
index cb866bb2d739..000000000000
--- a/pkgs/applications/networking/instant-messengers/gajim/fix-tests.patch
+++ /dev/null
@@ -1,13 +0,0 @@
-diff --git a/src/common/gajim.py b/src/common/gajim.py
-index 4a5d884b6..95d401b67 100644
---- a/src/common/gajim.py
-+++ b/src/common/gajim.py
-@@ -415,7 +415,7 @@ def get_jid_from_account(account_name, full=False):
-     jid = name + '@' + hostname
-     if full:
-         resource = connections[account_name].server_resource
--        jid += '/' + resource
-+        jid += '/' + str(resource)
-     return jid
- 
- def get_our_jids():
diff --git a/pkgs/applications/networking/instant-messengers/hipchat/default.nix b/pkgs/applications/networking/instant-messengers/hipchat/default.nix
index 770c2fc02c5e..3caa75acb070 100644
--- a/pkgs/applications/networking/instant-messengers/hipchat/default.nix
+++ b/pkgs/applications/networking/instant-messengers/hipchat/default.nix
@@ -4,7 +4,7 @@
 
 let
 
-  version = "4.30.2.1665";
+  version = "4.30.3.1670";
 
   rpath = stdenv.lib.makeLibraryPath [
     xdg_utils
@@ -44,7 +44,7 @@ let
     if stdenv.system == "x86_64-linux" then
       fetchurl {
         url = "https://atlassian.artifactoryonline.com/atlassian/hipchat-apt-client/pool/HipChat4-${version}-Linux.deb";
-        sha256 = "0gk1h2p5apppw94353378b2z93c5kllhgadb91z1g3mczczsbm0n";
+        sha256 = "0alqzay6bvi7ybrrdk5r0xkg4sx6qjsqbgmr16bkqxncxhb215ay";
       }
     else
       throw "HipChat is not supported on ${stdenv.system}";
diff --git a/pkgs/applications/networking/instant-messengers/linphone/default.nix b/pkgs/applications/networking/instant-messengers/linphone/default.nix
index 55187f335981..e0aecd2c8102 100644
--- a/pkgs/applications/networking/instant-messengers/linphone/default.nix
+++ b/pkgs/applications/networking/instant-messengers/linphone/default.nix
@@ -1,29 +1,33 @@
 { stdenv, fetchurl, intltool, pkgconfig, readline, openldap, cyrus_sasl, libupnp
 , zlib, libxml2, gtk2, libnotify, speex, ffmpeg, libX11, libsoup, udev
-, ortp, mediastreamer, sqlite, belle-sip, libosip, libexosip
+, ortp, mediastreamer, sqlite, belle-sip, libosip, libexosip, bzrtp
 , mediastreamer-openh264, bctoolbox, makeWrapper, fetchFromGitHub, cmake
 , libmatroska, bcunit, doxygen, gdk_pixbuf, glib, cairo, pango, polarssl
+, python, graphviz, belcard
 }:
 
 stdenv.mkDerivation rec {
   baseName = "linphone";
-  version = "3.10.2";
+  version = "3.12.0";
   name = "${baseName}-${version}";
 
   src = fetchFromGitHub {
     owner = "BelledonneCommunications";
     repo = "${baseName}";
     rev = "${version}";
-    sha256 = "053gad4amdbq5za8f2n9j5q59nkky0w098zbsa3dvpcqvv7ar16p";
+    sha256 = "0az2ywrpx11sqfb4s4r2v726avcjf4k15bvrqj7xvhz7hdndmh0j";
   };
 
   buildInputs = [
     readline openldap cyrus_sasl libupnp zlib libxml2 gtk2 libnotify speex ffmpeg libX11
     polarssl libsoup udev ortp mediastreamer sqlite belle-sip libosip libexosip
-    bctoolbox libmatroska bcunit gdk_pixbuf glib cairo pango
+    bctoolbox libmatroska bcunit gdk_pixbuf glib cairo pango bzrtp belcard
   ];
 
-  nativeBuildInputs = [ intltool pkgconfig makeWrapper cmake doxygen ];
+  nativeBuildInputs = [
+    intltool pkgconfig makeWrapper cmake doxygen graphviz
+    (python.withPackages (ps: [ ps.pystache ps.six ]))
+  ];
 
   NIX_CFLAGS_COMPILE = " -Wno-error -I${glib.dev}/include/glib-2.0
     -I${glib.out}/lib/glib-2.0/include -I${gtk2.dev}/include/gtk-2.0/
diff --git a/pkgs/applications/networking/instant-messengers/pybitmessage/default.nix b/pkgs/applications/networking/instant-messengers/pybitmessage/default.nix
index 0e052e847ccb..654c343caa8b 100644
--- a/pkgs/applications/networking/instant-messengers/pybitmessage/default.nix
+++ b/pkgs/applications/networking/instant-messengers/pybitmessage/default.nix
@@ -12,7 +12,7 @@ pythonPackages.buildPythonApplication rec {
     sha256 = "04sgns9qczzw2152gqdr6bjyy4fmgs26cz8n3qck94l0j51rxhz8";
   };
 
-  propagatedBuildInputs = with pythonPackages; [ msgpack pyqt4 numpy pyopencl ] ++ [ openssl ];
+  propagatedBuildInputs = with pythonPackages; [ msgpack-python pyqt4 numpy pyopencl ] ++ [ openssl ];
 
   preConfigure = ''
     # Remove interaction and misleading output
diff --git a/pkgs/applications/networking/instant-messengers/ring-daemon/default.nix b/pkgs/applications/networking/instant-messengers/ring-daemon/default.nix
index 0632e787c700..38bc58d8b103 100644
--- a/pkgs/applications/networking/instant-messengers/ring-daemon/default.nix
+++ b/pkgs/applications/networking/instant-messengers/ring-daemon/default.nix
@@ -77,7 +77,7 @@ let
       "${patchdir}/pjproject/add_dtls_transport.patch"
     ];
     CFLAGS = "-g -DPJ_ICE_MAX_CAND=256 -DPJ_ICE_MAX_CHECKS=150 -DPJ_ICE_COMP_BITS=2 -DPJ_ICE_MAX_STUN=3 -DPJSIP_MAX_PKT_LEN=8000";
-  }); 
+  });
 in
 stdenv.mkDerivation rec {
   name = "ring-daemon-${version}";
@@ -145,5 +145,7 @@ stdenv.mkDerivation rec {
     license = licenses.gpl3Plus;
     maintainers = with maintainers; [ taeer olynch ];
     platforms = platforms.linux;
+    # pjsip' fails to compile with the supplied patch set, see: https://hydra.nixos.org/build/68667921/nixlog/4
+    broken = true;
   };
 }
diff --git a/pkgs/applications/networking/instant-messengers/riot/riot-web.nix b/pkgs/applications/networking/instant-messengers/riot/riot-web.nix
index 92960e381233..ea8874548155 100644
--- a/pkgs/applications/networking/instant-messengers/riot/riot-web.nix
+++ b/pkgs/applications/networking/instant-messengers/riot/riot-web.nix
@@ -2,11 +2,11 @@
 
 stdenv.mkDerivation rec {
   name= "riot-web-${version}";
-  version = "0.13.3";
+  version = "0.13.5";
 
   src = fetchurl {
     url = "https://github.com/vector-im/riot-web/releases/download/v${version}/riot-v${version}.tar.gz";
-    sha256 = "0acim3kad6lv5ni4blg75phb3njyk9s5h6x7fsn151h1pvsc5mmw";
+    sha256 = "1ap62ksi3dg7qijxxysjpnlmngzgh2jdldvb8s1jx14avanccch6";
   };
 
   installPhase = ''
diff --git a/pkgs/applications/networking/instant-messengers/skypeforlinux/default.nix b/pkgs/applications/networking/instant-messengers/skypeforlinux/default.nix
index f75487565e1d..9e7377699bd7 100644
--- a/pkgs/applications/networking/instant-messengers/skypeforlinux/default.nix
+++ b/pkgs/applications/networking/instant-messengers/skypeforlinux/default.nix
@@ -6,7 +6,7 @@ let
 
   # Please keep the version x.y.0.z and do not update to x.y.76.z because the
   # source of the latter disappears much faster.
-  version = "8.13.0.2";
+  version = "8.16.0.4";
 
   rpath = stdenv.lib.makeLibraryPath [
     alsaLib
@@ -57,7 +57,7 @@ let
     if stdenv.system == "x86_64-linux" then
       fetchurl {
         url = "https://repo.skype.com/deb/pool/main/s/skypeforlinux/skypeforlinux_${version}_amd64.deb";
-        sha256 = "15p1v6y8fwx9qj3ag645bvrcw7c1j20v63iy75s4xwsv1siz8cf9";
+        sha256 = "1qc5qd07r768q9wkr2fq1q731hslh21i8rs41jb6pbn3ai65mxf5";
       }
     else
       throw "Skype for linux is not supported on ${stdenv.system}";
diff --git a/pkgs/applications/networking/instant-messengers/stride/default.nix b/pkgs/applications/networking/instant-messengers/stride/default.nix
new file mode 100644
index 000000000000..0bcf3493d29e
--- /dev/null
+++ b/pkgs/applications/networking/instant-messengers/stride/default.nix
@@ -0,0 +1,68 @@
+{ stdenv, fetchurl, dpkg, alsaLib, atk, cairo, cups, dbus, expat, fontconfig
+, freetype, gdk_pixbuf, glib, gnome2, nspr, nss, pango, udev, xorg }:
+let
+  fullPath = stdenv.lib.makeLibraryPath [
+    alsaLib
+    atk
+    cairo
+    cups
+    dbus
+    expat
+    fontconfig
+    freetype
+    gdk_pixbuf
+    glib
+    gnome2.GConf
+    gnome2.gtk
+    nspr
+    nss
+    pango
+    udev
+    xorg.libX11
+    xorg.libXScrnSaver
+    xorg.libXcomposite
+    xorg.libXcursor
+    xorg.libXdamage
+    xorg.libXext
+    xorg.libXfixes
+    xorg.libXi
+    xorg.libXrandr
+    xorg.libXrender
+    xorg.libXtst
+    xorg.libxcb
+  ] + ":${stdenv.cc.cc.lib}/lib64";
+in
+stdenv.mkDerivation rec {
+  version = "1.8.18";
+  name = "stride-${version}";
+
+  src = fetchurl {
+    url = "https://packages.atlassian.com/stride-apt-client/pool/stride_${version}_amd64.deb";
+    sha256 = "0hpj3i3xbvckxm7fphqqb3scb31w2cg4riwp593y0gnbivpc0hym";
+  };
+
+  dontBuild = true;
+  dontFixup = true;
+
+  buildInputs = [ dpkg ];
+
+  unpackPhase = ''
+    dpkg-deb -x ${src} ./
+  '';
+
+  installPhase =''
+    mkdir "$out"
+    mv usr/* "$out/"
+    patchelf --interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" \
+      --set-rpath "${fullPath}:\$ORIGIN" \
+      "$out/bin/stride"
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Desktop client for Atlassian Stride";
+    homepage = https://www.stride.com/;
+    license = licenses.unfree;
+    platforms = [ "x86_64-linux" ];
+    maintainers = with maintainers; [ puffnfresh ];
+  };
+}
diff --git a/pkgs/applications/networking/instant-messengers/teamspeak/client.nix b/pkgs/applications/networking/instant-messengers/teamspeak/client.nix
index b7dfdb3e3413..ea2030e964b9 100644
--- a/pkgs/applications/networking/instant-messengers/teamspeak/client.nix
+++ b/pkgs/applications/networking/instant-messengers/teamspeak/client.nix
@@ -31,7 +31,7 @@ in
 stdenv.mkDerivation rec {
   name = "teamspeak-client-${version}";
 
-  version = "3.1.7";
+  version = "3.1.8";
 
   src = fetchurl {
     urls = [
@@ -39,8 +39,8 @@ stdenv.mkDerivation rec {
       "http://teamspeak.gameserver.gamed.de/ts3/releases/${version}/TeamSpeak3-Client-linux_${arch}-${version}.run"
     ];
     sha256 = if stdenv.is64bit
-                then "1ww20805b7iphkh1ra3py6f7l7s321cg70sfl9iw69n05l3313fn"
-                else "0yvhmbhliraakn9k4bij6rnai7hn50g4z6mfjsyliizf6437x4nr";
+                then "0yav71sfklqg2k3ayd0bllsixd486l0587s5ygjlc9gnchw3zg6z"
+                else "1agf6jf5hkyxazxqcnvcjfb263p5532ahi7h4rkifnnvqay36v5i";
   };
 
   # grab the plugin sdk for the desktop icon
@@ -107,7 +107,7 @@ stdenv.mkDerivation rec {
       free = false;
     };
     maintainers = [ stdenv.lib.maintainers.lhvwb ];
-    platforms = stdenv.lib.platforms.linux;
+    platforms = [ "i686-linux" "x86_64-linux" ];
   };
 }
 
diff --git a/pkgs/applications/networking/instant-messengers/telegram/cutegram/default.nix b/pkgs/applications/networking/instant-messengers/telegram/cutegram/default.nix
index 29026ccdc5ad..77a8d57f8b6f 100644
--- a/pkgs/applications/networking/instant-messengers/telegram/cutegram/default.nix
+++ b/pkgs/applications/networking/instant-messengers/telegram/cutegram/default.nix
@@ -34,8 +34,8 @@ stdenv.mkDerivation rec {
     description = "Telegram client forked from sigram";
     homepage = http://aseman.co/en/products/cutegram/;
     license = licenses.gpl3;
-    maintainers = with maintainers; [ profpatsch AndersonTorres ];
+    maintainers = with maintainers; [ AndersonTorres ];
     platforms = platforms.linux;
   };
 }
-#TODO: appindicator, for system tray plugin (by @profpatsch)
+#TODO: appindicator, for system tray plugin
diff --git a/pkgs/applications/networking/instant-messengers/telegram/libqtelegram-aseman-edition/default.nix b/pkgs/applications/networking/instant-messengers/telegram/libqtelegram-aseman-edition/default.nix
index ec2e65dc4997..49368da708e9 100644
--- a/pkgs/applications/networking/instant-messengers/telegram/libqtelegram-aseman-edition/default.nix
+++ b/pkgs/applications/networking/instant-messengers/telegram/libqtelegram-aseman-edition/default.nix
@@ -25,7 +25,7 @@ stdenv.mkDerivation rec {
     description = "A fork of libqtelegram by Aseman, using qmake";
     homepage = src.meta.homepage;
     license = licenses.gpl3;
-    maintainers = [ maintainers.profpatsch ];
+    maintainers = [ maintainers.Profpatsch ];
     platforms = platforms.linux;
   };
 
diff --git a/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix b/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix
index c4158d280e2b..34f0d16a7b43 100644
--- a/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix
+++ b/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix
@@ -1,5 +1,5 @@
 { mkDerivation, lib, fetchgit, fetchpatch
-, pkgconfig, gyp, cmake, gcc7, makeWrapper
+, pkgconfig, gyp, cmake, makeWrapper
 , qtbase, qtimageformats, gtk3, libappindicator-gtk3
 , dee, ffmpeg, openalSoft, minizip, libopus, alsaLib, libpulseaudio, range-v3
 }:
@@ -31,7 +31,7 @@ mkDerivation rec {
     })
   ];
 
-  nativeBuildInputs = [ pkgconfig gyp cmake gcc7 makeWrapper ];
+  nativeBuildInputs = [ pkgconfig gyp cmake makeWrapper ];
 
   buildInputs = [
     qtbase qtimageformats gtk3 libappindicator-gtk3
diff --git a/pkgs/applications/networking/instant-messengers/telegram/telegram-qml/default.nix b/pkgs/applications/networking/instant-messengers/telegram/telegram-qml/default.nix
index c8d24c9b28c1..0efa7bee1d0b 100644
--- a/pkgs/applications/networking/instant-messengers/telegram/telegram-qml/default.nix
+++ b/pkgs/applications/networking/instant-messengers/telegram/telegram-qml/default.nix
@@ -28,7 +28,7 @@ stdenv.mkDerivation rec {
     description = "Telegram API tools for QtQml and Qml";
     homepage = src.meta.homepage;
     license = licenses.gpl3;
-    maintainers = [ maintainers.profpatsch ];
+    maintainers = [ maintainers.Profpatsch ];
     platforms = platforms.linux;
   };
 
diff --git a/pkgs/applications/networking/irc/irssi/default.nix b/pkgs/applications/networking/irc/irssi/default.nix
index c543825c9f28..97838312fd0b 100644
--- a/pkgs/applications/networking/irc/irssi/default.nix
+++ b/pkgs/applications/networking/irc/irssi/default.nix
@@ -1,12 +1,12 @@
 { stdenv, fetchurl, pkgconfig, ncurses, glib, openssl, perl, libintlOrEmpty }:
 
 stdenv.mkDerivation rec {
-  version = "1.1.0";
+  version = "1.1.1";
   name = "irssi-${version}";
 
   src = fetchurl {
     url = "https://github.com/irssi/irssi/releases/download/${version}/${name}.tar.gz";
-    sha256 = "0y362v6ncgs77q5axv7vgjm6vcxiaj5chsxj1ha07jaxsr1z7285";
+    sha256 = "09a9p1yfg0m3w7n2a4axvn8874002ly8x0b543sxihzqk29radpa";
   };
 
   nativeBuildInputs = [ pkgconfig ];
diff --git a/pkgs/applications/networking/mailreaders/afew/default.nix b/pkgs/applications/networking/mailreaders/afew/default.nix
index 7fbdf0f6a64c..e2b3d073dd33 100644
--- a/pkgs/applications/networking/mailreaders/afew/default.nix
+++ b/pkgs/applications/networking/mailreaders/afew/default.nix
@@ -2,17 +2,17 @@
 
 pythonPackages.buildPythonApplication rec {
   pname = "afew";
-  version = "1.2.0";
+  version = "1.3.0";
 
   src = pythonPackages.fetchPypi {
     inherit pname version;
-    sha256 = "121w7bd53xyibllxxbfykjj76n81kn1vgjqd22izyh67y8qyyk5r";
+    sha256 = "0105glmlkpkjqbz350dxxasvlfx9dk0him9vwbl86andzi106ygz";
   };
 
   buildInputs = with pythonPackages; [ setuptools_scm ];
 
   propagatedBuildInputs = with pythonPackages; [
-    pythonPackages.notmuch chardet
+    pythonPackages.notmuch chardet dkimpy
   ] ++ stdenv.lib.optional (!pythonPackages.isPy3k) subprocess32;
 
   makeWrapperArgs = [
diff --git a/pkgs/applications/networking/mailreaders/mailpile/default.nix b/pkgs/applications/networking/mailreaders/mailpile/default.nix
index 9c2ab08babcf..36dc94951d5c 100644
--- a/pkgs/applications/networking/mailreaders/mailpile/default.nix
+++ b/pkgs/applications/networking/mailreaders/mailpile/default.nix
@@ -1,27 +1,39 @@
-{ stdenv, fetchgit, python2Packages, gnupg1orig, makeWrapper, openssl }:
+{ stdenv, fetchFromGitHub, python2Packages, gnupg1orig, makeWrapper, openssl, git }:
 
 python2Packages.buildPythonApplication rec {
   name = "mailpile-${version}";
-  version = "0.4.1";
+  version = "1.0.0rc2";
 
-  src = fetchgit {
-    url = "git://github.com/pagekite/Mailpile";
-    rev = "refs/tags/${version}";
-    sha256 = "118b5zwfwmzj38p0mkj3r1s09jxg8x38y0a42b21imzpmli5vpb5";
+  src = fetchFromGitHub {
+    owner = "mailpile";
+    repo = "Mailpile";
+    rev = "${version}";
+    sha256 = "1z5psh00fjr8gnl4yjcl4m9ywfj24y1ffa2rfb5q8hq4ksjblbdj";
   };
 
-  patchPhase = ''
-    substituteInPlace setup.py --replace "data_files.append((dir" "data_files.append(('lib/${python2Packages.python.libPrefix}/site-packages/' + dir"
+  postPatch = ''
+    patchShebangs scripts
   '';
 
+  nativeBuildInputs = with python2Packages; [ pbr git ];
+  PBR_VERSION=version;
+
   propagatedBuildInputs = with python2Packages; [
-    makeWrapper pillow jinja2 spambayes python2Packages.lxml
-    pgpdump gnupg1orig
+    appdirs
+    cryptography
+    fasteners
+    gnupg1orig
+    jinja2
+    pgpdump
+    pillow
+    python2Packages.lxml
+    spambayes
   ];
 
   postInstall = ''
     wrapProgram $out/bin/mailpile \
-      --prefix PATH ":" "${stdenv.lib.makeBinPath [ gnupg1orig openssl ]}"
+      --prefix PATH ":" "${stdenv.lib.makeBinPath [ gnupg1orig openssl ]}" \
+      --set-default MAILPILE_SHARED "$out/share/mailpile"
   '';
 
   # No tests were found
diff --git a/pkgs/applications/networking/mailreaders/mblaze/default.nix b/pkgs/applications/networking/mailreaders/mblaze/default.nix
index 6cfac41676cc..dac9475665f5 100644
--- a/pkgs/applications/networking/mailreaders/mblaze/default.nix
+++ b/pkgs/applications/networking/mailreaders/mblaze/default.nix
@@ -2,7 +2,7 @@
 
 stdenv.mkDerivation rec {
   name = "mblaze-${version}";
-  version = "0.3";
+  version = "0.3.1";
 
   buildInputs = stdenv.lib.optionals stdenv.isDarwin [ libiconv ];
 
@@ -10,7 +10,7 @@ stdenv.mkDerivation rec {
     owner = "chneukirchen";
     repo = "mblaze";
     rev = "v${version}";
-    sha256 = "1jrn81rvw6qanlfppc12dkvpbmidzrq1lx3rfhvcsna55k3gjyw9";
+    sha256 = "1a4rqadq3dm6r11v7akng1qy88zpiq5qbqdryb8df3pxkv62nm1a";
   };
 
   makeFlags = "PREFIX=$(out)";
diff --git a/pkgs/applications/networking/mailreaders/neomutt/default.nix b/pkgs/applications/networking/mailreaders/neomutt/default.nix
index 8704961270df..6413c1407dc1 100644
--- a/pkgs/applications/networking/mailreaders/neomutt/default.nix
+++ b/pkgs/applications/networking/mailreaders/neomutt/default.nix
@@ -1,6 +1,6 @@
-{ stdenv, fetchFromGitHub, which, autoreconfHook, makeWrapper, writeScript,
-ncurses, perl , cyrus_sasl, gss, gpgme, kerberos, libidn, notmuch, openssl,
-lmdb, libxslt, docbook_xsl, docbook_xml_dtd_42, mime-types }:
+{ stdenv, fetchFromGitHub, gettext, makeWrapper, tcl, which, writeScript
+, ncurses, perl , cyrus_sasl, gss, gpgme, kerberos, libidn, notmuch, openssl
+, lmdb, libxslt, docbook_xsl, docbook_xml_dtd_42, mime-types }:
 
 let
   muttWrapper = writeScript "mutt" ''
@@ -15,14 +15,14 @@ let
   '';
 
 in stdenv.mkDerivation rec {
-  version = "20171208";
+  version = "20171215";
   name = "neomutt-${version}";
 
   src = fetchFromGitHub {
     owner  = "neomutt";
     repo   = "neomutt";
     rev    = "neomutt-${version}";
-    sha256 = "1fn28q4akfz0nq3ysp8n53j8yqp2mx6yhbvb59c4zm6zgd4qzgp1";
+    sha256 = "1c7vjl5cl0k41vrxp6l1sj72idz70r2rgaxa2m1yir6zb6qsrsd8";
   };
 
   buildInputs = [
@@ -32,7 +32,7 @@ in stdenv.mkDerivation rec {
   ];
 
   nativeBuildInputs = [
-    autoreconfHook docbook_xsl docbook_xml_dtd_42 libxslt.bin which makeWrapper
+    docbook_xsl docbook_xml_dtd_42 gettext libxslt.bin makeWrapper tcl which
   ];
 
   enableParallelBuilding = true;
@@ -51,18 +51,14 @@ in stdenv.mkDerivation rec {
   '';
 
   configureFlags = [
-    "--enable-debug"
-    "--enable-gpgme"
-    "--enable-notmuch"
-    "--with-curses"
-    "--with-gss"
+    "--gpgme"
+    "--gss"
+    "--lmdb"
+    "--notmuch"
+    "--ssl"
+    "--sasl"
     "--with-homespool=mailbox"
-    "--with-idn"
-    "--with-lmdb"
     "--with-mailpath="
-    "--with-sasl"
-    "--with-ssl"
-
     # Look in $PATH at runtime, instead of hardcoding /usr/bin/sendmail
     "ac_cv_path_SENDMAIL=sendmail"
   ];
diff --git a/pkgs/applications/networking/mailreaders/notmuch-addrlookup/0001-notmuch-0.25-compatibility-fix.patch b/pkgs/applications/networking/mailreaders/notmuch-addrlookup/0001-notmuch-0.25-compatibility-fix.patch
deleted file mode 100644
index be094c9a397f..000000000000
--- a/pkgs/applications/networking/mailreaders/notmuch-addrlookup/0001-notmuch-0.25-compatibility-fix.patch
+++ /dev/null
@@ -1,44 +0,0 @@
-From a736c0dfd22cd4ab0da86c30a664c91843df1b98 Mon Sep 17 00:00:00 2001
-From: Adam Ruzicka <a.ruzicka@outlook.com>
-Date: Sat, 29 Jul 2017 12:16:29 +0200
-Subject: [PATCH] notmuch-0.25 compatibility fix
-
----
- notmuch-addrlookup.c | 14 ++++++++++++++
- 1 file changed, 14 insertions(+)
-
-diff --git a/notmuch-addrlookup.c b/notmuch-addrlookup.c
-index c5cf5b4..a95ded0 100644
---- a/notmuch-addrlookup.c
-+++ b/notmuch-addrlookup.c
-@@ -171,6 +171,13 @@ create_queries (notmuch_database_t *db,
-       count += tmp;
-   if (notmuch_query_count_messages_st (queries[1], &tmp) == NOTMUCH_STATUS_SUCCESS)
-       count += tmp;
-+#elif LIBNOTMUCH_MAJOR_VERSION >= 5
-+  unsigned int count = 0;
-+  unsigned int tmp;
-+  if (notmuch_query_count_messages (queries[0], &tmp) == NOTMUCH_STATUS_SUCCESS)
-+      count += tmp;
-+  if (notmuch_query_count_messages (queries[1], &tmp) == NOTMUCH_STATUS_SUCCESS)
-+      count += tmp;
- #else
-   unsigned int count = notmuch_query_count_messages (queries[0])
-                      + notmuch_query_count_messages (queries[1]);
-@@ -233,6 +240,13 @@ run_queries (notmuch_database_t *db,
- #if LIBNOTMUCH_MAJOR_VERSION >= 4 && LIBNOTMUCH_MINOR_VERSION >= 3
-       if (notmuch_query_search_messages_st (queries[i], &messages) != NOTMUCH_STATUS_SUCCESS)
-           continue;
-+#elif LIBNOTMUCH_MAJOR_VERSION >= 5
-+  unsigned int count = 0;
-+  unsigned int tmp;
-+  if (notmuch_query_count_messages (queries[0], &tmp) == NOTMUCH_STATUS_SUCCESS)
-+      count += tmp;
-+  if (notmuch_query_count_messages (queries[1], &tmp) == NOTMUCH_STATUS_SUCCESS)
-+      count += tmp;
- #else
-       if (!(messages = notmuch_query_search_messages (queries[i])))
-           continue;
---
-2.13.3
-
diff --git a/pkgs/applications/networking/mailreaders/notmuch-addrlookup/default.nix b/pkgs/applications/networking/mailreaders/notmuch-addrlookup/default.nix
index f5d48d03c96a..c2cce227576a 100644
--- a/pkgs/applications/networking/mailreaders/notmuch-addrlookup/default.nix
+++ b/pkgs/applications/networking/mailreaders/notmuch-addrlookup/default.nix
@@ -1,32 +1,28 @@
 { stdenv, fetchFromGitHub, pkgconfig, glib, notmuch }:
 
+let
+  version = "9";
+in
 stdenv.mkDerivation rec {
   name = "notmuch-addrlookup-${version}";
-  version = "7";
 
   src = fetchFromGitHub {
     owner = "aperezdc";
     repo = "notmuch-addrlookup-c";
     rev ="v${version}";
-    sha256 = "0mz0llf1ggl1k46brgrqj3i8qlg1ycmkc5a3a0kg8fg4s1c1m6xk";
+    sha256 = "1j3zdx161i1x4w0nic14ix5i8hd501rb31daf8api0k8855sx4rc";
   };
 
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ glib notmuch ];
 
-  # Required until notmuch-addrlookup can be compiled against notmuch >= 0.25
-  patches = [ ./0001-notmuch-0.25-compatibility-fix.patch ];
-
-  installPhase = ''
-    mkdir -p "$out/bin"
-    cp notmuch-addrlookup "$out/bin"
-  '';
+  installPhase = "install -D notmuch-addrlookup $out/bin/notmuch-addrlookup";
 
   meta = with stdenv.lib; {
     description = "Address lookup tool for Notmuch in C";
     homepage = https://github.com/aperezdc/notmuch-addrlookup-c;
     maintainers = with maintainers; [ mog garbas ];
-    platforms = platforms.linux;
+    platforms = platforms.unix;
     license = licenses.mit;
   };
 }
diff --git a/pkgs/applications/networking/mailreaders/notmuch/default.nix b/pkgs/applications/networking/mailreaders/notmuch/default.nix
index 0c0f55e63370..c23c264559f8 100644
--- a/pkgs/applications/networking/mailreaders/notmuch/default.nix
+++ b/pkgs/applications/networking/mailreaders/notmuch/default.nix
@@ -71,7 +71,7 @@ stdenv.mkDerivation rec {
     [[ -s "$lib" ]] || die "couldn't find libnotmuch"
 
     badname="$(otool -L "$prg" | awk '$1 ~ /libtalloc/ { print $1 }')"
-    goodname="$(find "${talloc}/lib" -name 'libtalloc.?.?.?.dylib')"
+    goodname="$(find "${talloc}/lib" -name 'libtalloc.*.*.*.dylib')"
 
     [[ -n "$badname" ]]  || die "couldn't find libtalloc reference in binary"
     [[ -n "$goodname" ]] || die "couldn't find libtalloc in nix store"
diff --git a/pkgs/applications/networking/newsreaders/liferea/default.nix b/pkgs/applications/networking/newsreaders/liferea/default.nix
index 743da7958067..ed6fe17cc7e8 100644
--- a/pkgs/applications/networking/newsreaders/liferea/default.nix
+++ b/pkgs/applications/networking/newsreaders/liferea/default.nix
@@ -28,6 +28,7 @@ in stdenv.mkDerivation rec {
   pythonPath = with python3Packages; [ pygobject3 pycairo ];
 
   preFixup = ''
+    rm "$out/share/icons/hicolor/icon-theme.cache"
     buildPythonPath "$out $pythonPath"
     gappsWrapperArgs+=(--prefix PYTHONPATH : "$program_PYTHONPATH")
   '';
diff --git a/pkgs/applications/networking/nextcloud-client/default.nix b/pkgs/applications/networking/nextcloud-client/default.nix
index 652de194a5e7..3cbc03e8d73c 100644
--- a/pkgs/applications/networking/nextcloud-client/default.nix
+++ b/pkgs/applications/networking/nextcloud-client/default.nix
@@ -36,7 +36,10 @@ stdenv.mkDerivation rec {
     "-DINOTIFY_INCLUDE_DIR=${inotify-tools}/include"
   ];
 
-  postInstall = stdenv.lib.optionalString (withGnomeKeyring) ''
+  postInstall = ''
+    sed -i 's/\(Icon.*\)=nextcloud/\1=Nextcloud/g' \
+      $out/share/applications/nextcloud.desktop
+  '' + stdenv.lib.optionalString (withGnomeKeyring) ''
     wrapProgram "$out/bin/nextcloud" \
       --prefix LD_LIBRARY_PATH : ${stdenv.lib.makeLibraryPath [ libgnome_keyring ]}
   '';
diff --git a/pkgs/applications/networking/offrss/default.nix b/pkgs/applications/networking/offrss/default.nix
index 75ed084c2853..af6a4dfddc1b 100644
--- a/pkgs/applications/networking/offrss/default.nix
+++ b/pkgs/applications/networking/offrss/default.nix
@@ -8,18 +8,14 @@ stdenv.mkDerivation {
     cp offrss $out/bin
   '';
 
-  crossAttrs = {
-    propagatedBuildInputs = [ curl.crossDrv libmrss.crossDrv ];
-    preConfigure = ''
-      sed 's/^PDF/#PDF/' -i Makefile
-    '';
-  };
-
-  buildInputs = [ curl libmrss podofo ]
+  buildInputs = [ curl libmrss ]
+    ++ stdenv.lib.optional (stdenv.hostPlatform == stdenv.buildPlatform) podofo
     ++ stdenv.lib.optional (!stdenv.isLinux) libiconv;
 
   configurePhase = stdenv.lib.optionalString (!stdenv.isLinux) ''
     sed 's/#EXTRA/EXTRA/' -i Makefile
+  '' + stdenv.lib.optionalString (stdenv.hostPlatform != stdenv.buildPlatform) ''
+    sed 's/^PDF/#PDF/' -i Makefile
   '';
 
   src = fetchurl {
diff --git a/pkgs/applications/networking/p2p/qbittorrent/default.nix b/pkgs/applications/networking/p2p/qbittorrent/default.nix
index 59c48c0a3d3a..90d68a96e5c0 100644
--- a/pkgs/applications/networking/p2p/qbittorrent/default.nix
+++ b/pkgs/applications/networking/p2p/qbittorrent/default.nix
@@ -10,11 +10,11 @@ with stdenv.lib;
 
 stdenv.mkDerivation rec {
   name = "qbittorrent-${version}";
-  version = "4.0.3";
+  version = "4.0.4";
 
   src = fetchurl {
     url = "mirror://sourceforge/qbittorrent/${name}.tar.xz";
-    sha256 = "1lkbrvpzdfbqwilj09a9vraai7pz6dh999w4vl51mj1adm7bh0ws";
+    sha256 = "13sw0sdw2agm49plp9xvkg6wva274drpvgz76dqj4j2kfxx9s2jk";
   };
 
   nativeBuildInputs = [ pkgconfig which ];
diff --git a/pkgs/applications/networking/remote/xrdp/default.nix b/pkgs/applications/networking/remote/xrdp/default.nix
index b6b1f6542af3..ed1abfcba99d 100644
--- a/pkgs/applications/networking/remote/xrdp/default.nix
+++ b/pkgs/applications/networking/remote/xrdp/default.nix
@@ -3,13 +3,13 @@
 let
   xorgxrdp = stdenv.mkDerivation rec {
     name = "xorgxrdp-${version}";
-    version = "0.2.3";
+    version = "0.2.5";
 
     src = fetchFromGitHub {
       owner = "neutrinolabs";
       repo = "xorgxrdp";
       rev = "v${version}";
-      sha256 = "0l1b38j3q9mxyb8ffpdplbqs6rnabj92i8wngrwlkhfh2c88szn1";
+      sha256 = "05ix0bvbgpg0l0f6pyxp64a4785yv16dxf522y7k84b0rag4bxr7";
     };
 
     nativeBuildInputs = [ pkgconfig autoconf automake which libtool nasm ];
@@ -34,7 +34,7 @@ let
   };
 
   xrdp = stdenv.mkDerivation rec {
-    version = "0.9.3";
+    version = "0.9.5";
     name = "xrdp-${version}";
 
     src = fetchFromGitHub {
@@ -42,7 +42,7 @@ let
       repo = "xrdp";
       rev = "refs/heads/runtime-cfg-path-${version}";  # Fixes https://github.com/neutrinolabs/xrdp/issues/609; not a patch on top of the official repo because "xorgxrdp.configureFlags" above includes "xrdp.src" which must be patched already
       fetchSubmodules = true;
-      sha256 = "0xqyg3m688fj442zgg9fqmbz7nnzvqpd7a9ki2cwh1hyibacpmz7";
+      sha256 = "1sm994dic72zvxgwxw9z6an6050976nlnnn2my42pnzj9l5842d8";
     };
 
     nativeBuildInputs = [ pkgconfig autoconf automake which libtool nasm ];
diff --git a/pkgs/applications/networking/sniffers/wireshark/default.nix b/pkgs/applications/networking/sniffers/wireshark/default.nix
index 5556a58ec564..84e10fb18bca 100644
--- a/pkgs/applications/networking/sniffers/wireshark/default.nix
+++ b/pkgs/applications/networking/sniffers/wireshark/default.nix
@@ -40,7 +40,13 @@ in stdenv.mkDerivation {
     ++ optionals stdenv.isLinux  [ libcap libnl ]
     ++ optionals stdenv.isDarwin [ SystemConfiguration ApplicationServices gmp ];
 
-  patches = [ ./wireshark-lookup-dumpcap-in-path.patch ];
+  patches = [ ./wireshark-lookup-dumpcap-in-path.patch ]
+    # https://code.wireshark.org/review/#/c/23728/
+    ++ stdenv.lib.optional stdenv.hostPlatform.isMusl (fetchpatch {
+      name = "fix-timeout.patch";
+      url = "https://code.wireshark.org/review/gitweb?p=wireshark.git;a=commitdiff_plain;h=8b5b843fcbc3e03e0fc45f3caf8cf5fc477e8613;hp=94af9724d140fd132896b650d10c4d060788e4f0";
+      sha256 = "1g2dm7lwsnanwp68b9xr9swspx7hfj4v3z44sz3yrfmynygk8zlv";
+    });
 
   postInstall = optionalString (withQt || withGtk) ''
     ${optionalString withGtk ''
diff --git a/pkgs/applications/networking/syncthing/add-stcli-target.patch b/pkgs/applications/networking/syncthing/add-stcli-target.patch
new file mode 100644
index 000000000000..58ac15253aed
--- /dev/null
+++ b/pkgs/applications/networking/syncthing/add-stcli-target.patch
@@ -0,0 +1,17 @@
+diff --git i/build.go w/build.go
+index 7d400d6f..1b5e1d25 100644
+--- i/build.go
++++ w/build.go
+@@ -175,6 +175,12 @@ var targets = map[string]target{
+ 			{src: "AUTHORS", dst: "deb/usr/share/doc/syncthing-relaypoolsrv/AUTHORS.txt", perm: 0644},
+ 		},
+ 	},
++	"stcli": {
++		name:        "stcli",
++		description: "Syncthing CLI",
++		buildPkg:    "github.com/syncthing/syncthing/cmd/stcli",
++		binaryName:  "stcli", // .exe will be added automatically for Windows builds
++	},
+ }
+ 
+ func init() {
diff --git a/pkgs/applications/networking/syncthing/default.nix b/pkgs/applications/networking/syncthing/default.nix
index 1a79e31a05d8..64c0b31a2a4d 100644
--- a/pkgs/applications/networking/syncthing/default.nix
+++ b/pkgs/applications/networking/syncthing/default.nix
@@ -1,57 +1,103 @@
-{ stdenv, lib, fetchFromGitHub, go, procps, removeReferencesTo }:
+{ stdenv, lib, go, procps, removeReferencesTo, fetchFromGitHub }:
 
-stdenv.mkDerivation rec {
-  version = "0.14.43";
-  name = "syncthing-${version}";
+let
+  common = { stname, target, patches ? [], postInstall ? "" }:
+    stdenv.mkDerivation rec {
+      version = "0.14.44";
+      name = "${stname}-${version}";
 
-  src = fetchFromGitHub {
-    owner  = "syncthing";
-    repo   = "syncthing";
-    rev    = "v${version}";
-    sha256 = "1n09zmp9dqrl3y0fa0l1gx6f09j9mm3xdf7b58y03znspsg7mxhi";
-  };
+      src = fetchFromGitHub {
+        owner  = "syncthing";
+        repo   = "syncthing";
+        rev    = "v${version}";
+        sha256 = "1gdkx6lbzmdz2hqc9slbq41rwgkxmdisnj0iywx4mppmc2b4v6wh";
+      };
+
+      inherit patches;
+
+      buildInputs = [ go ];
+      nativeBuildInputs = [ removeReferencesTo ];
+
+      buildPhase = ''
+        # Syncthing expects that it is checked out in $GOPATH, if that variable is
+        # set.  Since this isn't true when we're fetching source, we can explicitly
+        # unset it and force Syncthing to set up a temporary one for us.
+        env GOPATH= BUILD_USER=nix BUILD_HOST=nix go run build.go -no-upgrade -version v${version} build ${target}
+      '';
+
+      installPhase = ''
+        install -Dm755 ${target} $out/bin/${target}
+        runHook postInstall
+      '';
+
+      inherit postInstall;
 
-  buildInputs = [ go removeReferencesTo ];
+      preFixup = ''
+        find $out/bin -type f -exec remove-references-to -t ${go} '{}' '+'
+      '';
 
-  buildPhase = ''
-    mkdir -p src/github.com/syncthing
-    ln -s $(pwd) src/github.com/syncthing/syncthing
-    export GOPATH=$(pwd)
+      meta = with lib; {
+        homepage = https://www.syncthing.net/;
+        description = "Open Source Continuous File Synchronization";
+        license = licenses.mpl20;
+        maintainers = with maintainers; [ pshendry joko peterhoeg andrew-d ];
+        platforms = platforms.unix;
+      };
+    };
 
-    # Syncthing's build.go script expects this working directory
-    cd src/github.com/syncthing/syncthing
+in {
+  syncthing = common {
+    stname = "syncthing";
+    target = "syncthing";
 
-    go run build.go -no-upgrade -version v${version} build
-  '';
+    postInstall = ''
+      # This installs man pages in the correct directory according to the suffix
+      # on the filename
+      for mf in man/*.[1-9]; do
+        mantype="$(echo "$mf" | awk -F"." '{print $NF}')"
+        mandir="$out/share/man/man$mantype"
+        install -Dm644 "$mf" "$mandir/$(basename "$mf")"
+      done
 
-  installPhase = ''
-    mkdir -p $out/lib/systemd/{system,user}
+    '' + lib.optionalString (stdenv.isLinux) ''
+      mkdir -p $out/lib/systemd/{system,user}
 
-    install -Dm755 syncthing $out/bin/syncthing
+      substitute etc/linux-systemd/system/syncthing-resume.service \
+                 $out/lib/systemd/system/syncthing-resume.service \
+                 --replace /usr/bin/pkill ${procps}/bin/pkill
 
-  '' + lib.optionalString (stdenv.isLinux) ''
-    substitute etc/linux-systemd/system/syncthing-resume.service \
-               $out/lib/systemd/system/syncthing-resume.service \
-               --replace /usr/bin/pkill ${procps}/bin/pkill
+      substitute etc/linux-systemd/system/syncthing@.service \
+                 $out/lib/systemd/system/syncthing@.service \
+                 --replace /usr/bin/syncthing $out/bin/syncthing
 
-    substitute etc/linux-systemd/system/syncthing@.service \
-               $out/lib/systemd/system/syncthing@.service \
-               --replace /usr/bin/syncthing $out/bin/syncthing
+      substitute etc/linux-systemd/user/syncthing.service \
+                 $out/lib/systemd/user/syncthing.service \
+                 --replace /usr/bin/syncthing $out/bin/syncthing
+    '';
+  };
+
+  syncthing-cli = common {
+    stname = "syncthing-cli";
+
+    patches = [ ./add-stcli-target.patch ];
+    target = "stcli";
+  };
+
+  syncthing-discovery = common {
+    stname = "syncthing-discovery";
+    target = "stdiscosrv";
+  };
 
-    substitute etc/linux-systemd/user/syncthing.service \
-               $out/lib/systemd/user/syncthing.service \
-               --replace /usr/bin/syncthing $out/bin/syncthing
-  '';
+  syncthing-relay = common {
+    stname = "syncthing-relay";
+    target = "strelaysrv";
 
-  preFixup = ''
-    find $out/bin -type f -exec remove-references-to -t ${go} '{}' '+'
-  '';
+    postInstall = lib.optionalString (stdenv.isLinux) ''
+      mkdir -p $out/lib/systemd/system
 
-  meta = with stdenv.lib; {
-    homepage = https://www.syncthing.net/;
-    description = "Open Source Continuous File Synchronization";
-    license = licenses.mpl20;
-    maintainers = with maintainers; [ pshendry joko peterhoeg ];
-    platforms = platforms.unix;
+      substitute cmd/strelaysrv/etc/linux-systemd/strelaysrv.service \
+                 $out/lib/systemd/system/strelaysrv.service \
+                 --replace /usr/bin/strelaysrv $out/bin/strelaysrv
+    '';
   };
 }
diff --git a/pkgs/applications/networking/syncthing012/default.nix b/pkgs/applications/networking/syncthing012/default.nix
deleted file mode 100644
index cd6fcc28a50a..000000000000
--- a/pkgs/applications/networking/syncthing012/default.nix
+++ /dev/null
@@ -1,35 +0,0 @@
-{ stdenv, lib, buildGoPackage, fetchFromGitHub }:
-
-buildGoPackage rec {
-  name = "syncthing-${version}";
-  version = "0.12.15";
-  rev = "v${version}";
-
-  goPackagePath = "github.com/syncthing/syncthing";
-
-  src = fetchFromGitHub {
-    inherit rev;
-    owner = "syncthing";
-    repo = "syncthing";
-    sha256 = "0g4sj509h45iq6g7b0pl88rbbn7c7s01774yjc6bl376x1xrl6a1";
-  };
-
-  goDeps = ./deps.nix;
-
-  postPatch = ''
-    # Mostly a cosmetic change
-    sed -i 's,unknown-dev,${version},g' cmd/syncthing/main.go
-  '';
-
-  preBuild = ''
-    export buildFlagsArray+=("-tags" "noupgrade release")
-  '';
-
-  meta = {
-    knownVulnerabilities = [ "CVE-2017-1000420" ];
-    homepage = https://www.syncthing.net/;
-    description = "Open Source Continuous File Synchronization";
-    license = stdenv.lib.licenses.mpl20;
-    platforms = with stdenv.lib.platforms; linux ++ freebsd ++ openbsd ++ netbsd;
-  };
-}
diff --git a/pkgs/applications/networking/syncthing012/deps.nix b/pkgs/applications/networking/syncthing012/deps.nix
deleted file mode 100644
index 44e18c2f606d..000000000000
--- a/pkgs/applications/networking/syncthing012/deps.nix
+++ /dev/null
@@ -1,128 +0,0 @@
-[
-  {
-    goPackagePath = "golang.org/x/crypto";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/crypto";
-      rev = "575fdbe86e5dd89229707ebec0575ce7d088a4a6";
-      sha256 = "1kgv1mkw9y404pk3lcwbs0vgl133mwyp294i18jg9hp10s5d56xa";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/net";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/net";
-      rev = "62ac18b461605b4be188bbc7300e9aa2bc836cd4";
-      sha256 = "0lwwvbbwbf3yshxkfhn6z20gd45dkvnmw2ms36diiy34krgy402p";
-    };
-  }
-  {
-    goPackagePath = "github.com/rcrowley/go-metrics";
-    fetch = {
-      type = "git";
-      url = "https://github.com/rcrowley/go-metrics";
-      rev = "1ce93efbc8f9c568886b2ef85ce305b2217b3de3";
-      sha256 = "06gg72krlmd0z3zdq6s716blrga95pyj8dc2f2psfbknbkyrkfqa";
-    };
-  }
-  {
-    goPackagePath = "github.com/kardianos/osext";
-    fetch = {
-      type = "git";
-      url = "https://github.com/kardianos/osext";
-      rev = "29ae4ffbc9a6fe9fb2bc5029050ce6996ea1d3bc";
-      sha256 = "1mawalaz84i16njkz6f9fd5jxhcbxkbsjnav3cmqq2dncv2hyv8a";
-    };
-  }
-  {
-    goPackagePath = "github.com/bkaradzic/go-lz4";
-    fetch = {
-      type = "git";
-      url = "https://github.com/bkaradzic/go-lz4";
-      rev = "74ddf82598bc4745b965729e9c6a463bedd33049";
-      sha256 = "1vdid8v0c2v2qhrg9rzn3l7ya1h34jirrxfnir7gv7w6s4ivdvc1";
-    };
-  }
-  {
-    goPackagePath = "github.com/calmh/luhn";
-    fetch = {
-      type = "git";
-      url = "https://github.com/calmh/luhn";
-      rev = "0c8388ff95fa92d4094011e5a04fc99dea3d1632";
-      sha256 = "1hfj1lx7wdpifn16zqrl4xml6cj5gxbn6hfz1f46g2a6bdf0gcvs";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/text";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/text";
-      rev = "5eb8d4684c4796dd36c74f6452f2c0fa6c79597e";
-      sha256 = "1cjwm2pv42dbfqc6ylr7jmma902zg4gng5aarqrbjf1k2nf2vs14";
-    };
-  }
-  {
-    goPackagePath = "github.com/vitrun/qart";
-    fetch = {
-      type = "git";
-      url = "https://github.com/vitrun/qart";
-      rev = "ccb109cf25f0cd24474da73b9fee4e7a3e8a8ce0";
-      sha256 = "0bhp768b8ha6f25dmhwn9q8m2lkbn4qnjf8n7pizk25jn5zjdvc8";
-    };
-  }
-  {
-    goPackagePath = "github.com/calmh/du";
-    fetch = {
-      type = "git";
-      url = "https://github.com/calmh/du";
-      rev = "3c0690cca16228b97741327b1b6781397afbdb24";
-      sha256 = "1mv6mkbslfc8giv47kyl97ny0igb3l7jya5hc75sm54xi6g205wa";
-    };
-  }
-  {
-    goPackagePath = "github.com/calmh/xdr";
-    fetch = {
-      type = "git";
-      url = "https://github.com/calmh/xdr";
-      rev = "e467b5aeb65ca8516fb3925c84991bf1d7cc935e";
-      sha256 = "1bi4b2xkjzcr0vq1wxz14i9943k71sj092dam0gdmr9yvdrg0nra";
-    };
-  }
-  {
-    goPackagePath = "github.com/juju/ratelimit";
-    fetch = {
-      type = "git";
-      url = "https://github.com/juju/ratelimit";
-      rev = "772f5c38e468398c4511514f4f6aa9a4185bc0a0";
-      sha256 = "02rs61ay6sq499lxxszjsrxp33m6zklds1xrmnr5fk73vpqfa28p";
-    };
-  }
-  {
-    goPackagePath = "github.com/thejerf/suture";
-    fetch = {
-      type = "git";
-      url = "https://github.com/thejerf/suture";
-      rev = "99c1f2d613756768fc4299acd9dc621e11ed3fd7";
-      sha256 = "094ksr2nlxhvxr58nbnzzk0prjskb21r86jmxqjr3rwg4rkwn6d4";
-    };
-  }
-  {
-    goPackagePath = "github.com/golang/snappy";
-    fetch = {
-      type = "git";
-      url = "https://github.com/golang/snappy";
-      rev = "723cc1e459b8eea2dea4583200fd60757d40097a";
-      sha256 = "0bprq0qb46f5511b5scrdqqzskqqi2z8b4yh3216rv0n1crx536h";
-    };
-  }
-  {
-    goPackagePath = "github.com/syndtr/goleveldb";
-    fetch = {
-      type = "git";
-      url = "https://github.com/syndtr/goleveldb";
-      rev = "1a9d62f03ea92815b46fcaab357cfd4df264b1a0";
-      sha256 = "04ywbif36fiah4fw0x2abr5q3p4fdhi6q57d5icc2mz03q889vhb";
-    };
-  }
-]
diff --git a/pkgs/applications/networking/syncthing013/default.nix b/pkgs/applications/networking/syncthing013/default.nix
deleted file mode 100644
index e1a0dc38c11f..000000000000
--- a/pkgs/applications/networking/syncthing013/default.nix
+++ /dev/null
@@ -1,39 +0,0 @@
-{ stdenv, fetchgit, go }:
-
-stdenv.mkDerivation rec {
-  version = "0.13.10";
-  name = "syncthing-${version}";
-
-  src = fetchgit {
-    url = https://github.com/syncthing/syncthing;
-    rev = "refs/tags/v${version}";
-    sha256 = "07q3j6mnrza719rnvbkdsmvlkyr2pch5sj2l204m5iy5mxaghpx7";
-  };
-
-  buildInputs = [ go ];
-
-  buildPhase = ''
-    mkdir -p src/github.com/syncthing
-    ln -s $(pwd) src/github.com/syncthing/syncthing
-    export GOPATH=$(pwd)
-
-    # Syncthing's build.go script expects this working directory
-    cd src/github.com/syncthing/syncthing
-
-    go run build.go -no-upgrade -version v${version} install all
-  '';
-
-  installPhase = ''
-    mkdir -p $out/bin
-    cp bin/* $out/bin
-  '';
-
-  meta = {
-    knownVulnerabilities = [ "CVE-2017-1000420" ];
-    homepage = https://www.syncthing.net/;
-    description = "Open Source Continuous File Synchronization";
-    license = stdenv.lib.licenses.mpl20;
-    maintainers = with stdenv.lib.maintainers; [pshendry];
-    platforms = with stdenv.lib.platforms; linux ++ freebsd ++ openbsd ++ netbsd;
-  };
-}
diff --git a/pkgs/applications/office/beancount/bean-add.nix b/pkgs/applications/office/beancount/bean-add.nix
index 9cee31b01eb7..9eec315217cb 100644
--- a/pkgs/applications/office/beancount/bean-add.nix
+++ b/pkgs/applications/office/beancount/bean-add.nix
@@ -1,13 +1,13 @@
 { stdenv, fetchFromGitHub, python3Packages }:
 
 stdenv.mkDerivation rec {
-  name = "bean-add-2017-10-31";
+  name = "bean-add-2018-01-08";
 
   src = fetchFromGitHub {
     owner = "simon-v";
     repo = "bean-add";
-    rev = "9ac64272a17e76f8292bd94deb5aee45c14130d2";
-    sha256 = "1vcwbbi2jsf87yq8f2hyf7nz9br1973sb20qjnsx5fxlmcpn47jh";
+    rev = "660c657f295b019d8dbc26375924eb17bf654341";
+    sha256 = "0vzff2hdng8ybwd5frflhxpak0yqg0985p1dy7vpvhr8kbqqzwdz";
   };
 
   propagatedBuildInputs = with python3Packages; [ python ];
diff --git a/pkgs/applications/office/spice-up/default.nix b/pkgs/applications/office/spice-up/default.nix
new file mode 100644
index 000000000000..ddbc880690e7
--- /dev/null
+++ b/pkgs/applications/office/spice-up/default.nix
@@ -0,0 +1,61 @@
+{ stdenv
+, fetchFromGitHub
+, gettext
+, libxml2
+, pkgconfig
+, gtk3
+, granite
+, gnome3
+, json_glib
+, cmake
+, ninja
+, libgudev
+, libevdev
+, vala
+, wrapGAppsHook }:
+
+stdenv.mkDerivation rec {
+  name = "spice-up-${version}";
+  version = "1.3.2";
+
+  src = fetchFromGitHub {
+    owner = "Philip-Scott";
+    repo = "Spice-up";
+    rev = version;
+    sha256 = "087cdi7na93pgz7vf046h94v5ydvpiccpwhllq85ix8g4pa5rp85";
+  };
+  USER = "nix-build-user";
+
+  XDG_DATA_DIRS = stdenv.lib.concatStringsSep ":" [
+    "${granite}/share"
+    "${gnome3.libgee}/share"
+  ];
+
+  nativeBuildInputs = [
+    pkgconfig
+    wrapGAppsHook
+    vala
+    cmake
+    ninja
+    gettext
+    libxml2
+  ];
+  buildInputs = [
+    gtk3
+    granite
+    gnome3.libgee
+    json_glib
+    libgudev
+    libevdev
+    gnome3.gnome_themes_standard
+  ];
+
+  meta = with stdenv.lib; {
+    description = "Create simple and beautiful presentations on the Linux desktop";
+    homepage = https://github.com/Philip-Scott/Spice-up;
+    maintainers = with maintainers; [ samdroid-apps ];
+    platforms = platforms.linux;
+    # The COPYING file has GPLv3; some files have GPLv2+ and some have GPLv3+
+    license = licenses.gpl3Plus;
+  };
+}
diff --git a/pkgs/applications/office/wordgrinder/default.nix b/pkgs/applications/office/wordgrinder/default.nix
index da096acc27fc..be5ac7a2f2be 100644
--- a/pkgs/applications/office/wordgrinder/default.nix
+++ b/pkgs/applications/office/wordgrinder/default.nix
@@ -16,8 +16,7 @@ stdenv.mkDerivation rec {
     "PREFIX=$(out)"
     "LUA_INCLUDE=${lua52Packages.lua}/include"
     "LUA_LIB=${lua52Packages.lua}/lib/liblua.so"
-    "XFT_PACKAGE=--libs=\{-lX11 -lXft\}"
-  ];
+  ] ++ stdenv.lib.optional stdenv.isLinux "XFT_PACKAGE=--libs=\{-lX11 -lXft\}";
 
   dontUseNinjaBuild = true;
   dontUseNinjaInstall = true;
@@ -37,11 +36,12 @@ stdenv.mkDerivation rec {
   ];
 
   # To be able to find <Xft.h>
-  NIX_CFLAGS_COMPILE = "-I${libXft.dev}/include/X11";
+  NIX_CFLAGS_COMPILE = stdenv.lib.optionalString stdenv.isLinux "-I${libXft.dev}/include/X11";
 
   # Binaries look for LuaFileSystem library (lfs.so) at runtime
   postInstall = ''
     wrapProgram $out/bin/wordgrinder --set LUA_CPATH "${lua52Packages.luafilesystem}/lib/lua/5.2/lfs.so";
+  '' + stdenv.lib.optionalString stdenv.isLinux ''
     wrapProgram $out/bin/xwordgrinder --set LUA_CPATH "${lua52Packages.luafilesystem}/lib/lua/5.2/lfs.so";
   '';
 
@@ -50,6 +50,6 @@ stdenv.mkDerivation rec {
     homepage = https://cowlark.com/wordgrinder;
     license = licenses.mit;
     maintainers = with maintainers; [ matthiasbeyer ];
-    platforms = with stdenv.lib.platforms; linux;
+    platforms = with stdenv.lib.platforms; linux ++ darwin;
   };
 }
diff --git a/pkgs/applications/science/biology/raxml/default.nix b/pkgs/applications/science/biology/raxml/default.nix
new file mode 100644
index 000000000000..0bac6c778049
--- /dev/null
+++ b/pkgs/applications/science/biology/raxml/default.nix
@@ -0,0 +1,42 @@
+{ stdenv
+, fetchFromGitHub
+, zlib
+, pkgs
+, mpi ? false
+}:
+
+stdenv.mkDerivation rec {
+  pname = "RAxML";
+  version = "8.2.11";
+  name = "${pname}-${version}";
+
+  src = fetchFromGitHub {
+    owner = "stamatak";
+    repo = "standard-${pname}";
+    rev = "v${version}";
+    sha256 = "08fmqrr7y5a2fmmrgfz2p0hmn4mn71l5yspxfcwwsqbw6vmdfkhg";
+  };
+
+  buildInputs = if mpi then [ pkgs.openmpi ] else [];
+
+  # TODO darwin, AVX and AVX2 makefile targets
+  buildPhase = if mpi then ''
+      make -f Makefile.MPI.gcc
+    '' else ''
+      make -f Makefile.SSE3.PTHREADS.gcc
+    '';
+
+  installPhase = if mpi then ''
+    mkdir -p $out/bin && cp raxmlHPC-MPI $out/bin
+  '' else ''
+    mkdir -p $out/bin && cp raxmlHPC-PTHREADS-SSE3 $out/bin
+  '';
+
+  meta = with stdenv.lib; {
+    description = "A tool for Phylogenetic Analysis and Post-Analysis of Large Phylogenies";
+    license = licenses.gpl3;
+    homepage = https://sco.h-its.org/exelixis/web/software/raxml/;
+    maintainers = [ maintainers.unode ];
+    platforms = [ "i686-linux" "x86_64-linux" ];
+  };
+}
diff --git a/pkgs/applications/science/biology/samtools/default.nix b/pkgs/applications/science/biology/samtools/default.nix
index 640f32671bbd..365057414e99 100644
--- a/pkgs/applications/science/biology/samtools/default.nix
+++ b/pkgs/applications/science/biology/samtools/default.nix
@@ -3,11 +3,11 @@
 stdenv.mkDerivation rec {
   name = "${pname}-${version}";
   pname = "samtools";
-  version = "1.6";
+  version = "1.7";
 
   src = fetchurl {
     url = "https://github.com/samtools/samtools/releases/download/${version}/${name}.tar.bz2";
-    sha256 = "17p4vdj2j2qr3b2c0v4100h6cg4jj3zrb4dmdnd9d9aqs74d4p7f";
+    sha256 = "e7b09673176aa32937abd80f95f432809e722f141b5342186dfef6a53df64ca1";
   };
 
   nativeBuildInputs = [ perl ];
diff --git a/pkgs/applications/science/biology/samtools/samtools-0.1.19-no-curses.patch b/pkgs/applications/science/biology/samtools/samtools-0.1.19-no-curses.patch
new file mode 100644
index 000000000000..a7782a1a0264
--- /dev/null
+++ b/pkgs/applications/science/biology/samtools/samtools-0.1.19-no-curses.patch
@@ -0,0 +1,22 @@
+diff --git a/Makefile b/Makefile
+index 2f51bfc..395d6f1 100644
+--- a/Makefile
++++ b/Makefile
+@@ -1,7 +1,7 @@
+ CC=			gcc
+ CFLAGS=		-g -Wall -O2
+ #LDFLAGS=		-Wl,-rpath,\$$ORIGIN/../lib
+-DFLAGS=		-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_USE_KNETFILE -D_CURSES_LIB=1
++DFLAGS=		-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_USE_KNETFILE # -D_CURSES_LIB=1
+ KNETFILE_O=	knetfile.o
+ LOBJS=		bgzf.o kstring.o bam_aux.o bam.o bam_import.o sam.o bam_index.o	\
+ 			bam_pileup.o bam_lpileup.o bam_md.o razf.o faidx.o bedidx.o \
+@@ -15,7 +15,7 @@ PROG=		samtools
+ INCLUDES=	-I.
+ SUBDIRS=	. bcftools misc
+ LIBPATH=
+-LIBCURSES=	-lcurses # -lXCurses
++LIBCURSES=	# -lcurses # -lXCurses
+ 
+ .SUFFIXES:.c .o
+ .PHONY: all lib
diff --git a/pkgs/applications/science/biology/samtools/samtools_0_1_19.nix b/pkgs/applications/science/biology/samtools/samtools_0_1_19.nix
new file mode 100644
index 000000000000..a811bc4412f2
--- /dev/null
+++ b/pkgs/applications/science/biology/samtools/samtools_0_1_19.nix
@@ -0,0 +1,34 @@
+{ stdenv, fetchurl, zlib }:
+
+stdenv.mkDerivation rec {
+  name = "${pname}-${version}";
+  pname = "samtools";
+  version = "0.1.19";
+
+  src = fetchurl {
+    url = "mirror://sourceforge/samtools/${name}.tar.bz2";
+    sha256 = "d080c9d356e5f0ad334007e4461cbcee3c4ca97b8a7a5a48c44883cf9dee63d4";
+  };
+
+  patches = [
+    ./samtools-0.1.19-no-curses.patch
+  ];
+
+  buildInputs = [ zlib ];
+
+  installPhase = ''
+    mkdir -p $out/bin
+    mkdir -p $out/share/man
+
+    cp samtools $out/bin
+    cp samtools.1 $out/share/man
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Tools for manipulating SAM/BAM/CRAM format";
+    license = licenses.mit;
+    homepage = http://samtools.sourceforge.net/;
+    platforms = platforms.unix;
+    maintainers = [ maintainers.unode ];
+  };
+}
diff --git a/pkgs/applications/science/chemistry/octopus/default.nix b/pkgs/applications/science/chemistry/octopus/default.nix
new file mode 100644
index 000000000000..2ff20fef40e8
--- /dev/null
+++ b/pkgs/applications/science/chemistry/octopus/default.nix
@@ -0,0 +1,47 @@
+{ stdenv, fetchurl, symlinkJoin, gfortran, perl, procps
+, libyaml, libxc, fftw, openblas, gsl
+}:
+
+let
+  version = "7.2";
+  fftwAll = symlinkJoin { name ="ftw-dev-out"; paths = [ fftw.dev fftw.out ]; };
+
+in stdenv.mkDerivation {
+  name = "octopus-${version}";
+
+  src = fetchurl {
+    url = "http://www.tddft.org/programs/octopus/down.php?file=${version}/octopus-${version}.tar.gz";
+    sha256 = "03zzmq72zdnjkhifbmlxs7ig7x6sf6mv8zv9mxhakm9hzwa9yn7m";
+  };
+
+  nativeBuildInputs = [ perl procps fftw.dev ];
+  buildInputs = [ libyaml gfortran libxc openblas gsl fftw.out ];
+
+  configureFlags = ''
+    --with-yaml-prefix=${libyaml}
+    --with-blas=-lopenblas
+    --with-lapack=-lopenblas
+    --with-fftw-prefix=${fftwAll}
+    --with-gsl-prefix=${gsl}
+    --with-libxc-prefix=${libxc}
+  '';
+
+  doCheck = false;
+  checkTarget = "check-short";
+
+  postPatch = ''
+    patchShebangs ./
+  '';
+
+  postConfigure = ''
+    patchShebangs testsuite/oct-run_testsuite.sh
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Real-space time dependent density-functional theory code";
+    homepage = http://octopus-code.org;
+    maintainers = with maintainers; [ markuskowa ];
+    license = licenses.gpl2;
+    platforms = [ "x86_64-linux" ];
+  };
+}
diff --git a/pkgs/applications/science/logic/avy/default.nix b/pkgs/applications/science/logic/avy/default.nix
index 379224c73f89..218006e15d5c 100644
--- a/pkgs/applications/science/logic/avy/default.nix
+++ b/pkgs/applications/science/logic/avy/default.nix
@@ -12,7 +12,25 @@ stdenv.mkDerivation rec {
   };
 
   buildInputs = [ cmake zlib boost.out boost.dev ];
-  NIX_CFLAGS_COMPILE = [ "-Wno-narrowing" ];
+  NIX_CFLAGS_COMPILE = [ "-Wno-narrowing" ]
+    # Squelch endless stream of warnings on same few things
+    ++ stdenv.lib.optionals stdenv.cc.isClang [
+      "-Wno-empty-body"
+      "-Wno-tautological-compare"
+      "-Wc++11-compat-deprecated-writable-strings"
+      "-Wno-deprecated"
+    ];
+
+  prePatch = ''
+    sed -i -e '1i#include <stdint.h>' abc/src/bdd/dsd/dsd.h
+    substituteInPlace abc/src/bdd/dsd/dsd.h --replace \
+               '((Child = Dsd_NodeReadDec(Node,Index))>=0);' \
+               '((intptr_t)(Child = Dsd_NodeReadDec(Node,Index))>=0);'
+
+    patch -p1 -d minisat -i ${./minisat-fenv.patch}
+    patch -p1 -d glucose -i ${./glucose-fenv.patch}
+  '';
+
   patches =
     [ ./0001-no-static-boost-libs.patch
     ];
diff --git a/pkgs/applications/science/logic/avy/glucose-fenv.patch b/pkgs/applications/science/logic/avy/glucose-fenv.patch
new file mode 100644
index 000000000000..dd19f7ec80e7
--- /dev/null
+++ b/pkgs/applications/science/logic/avy/glucose-fenv.patch
@@ -0,0 +1,65 @@
+From d6e0cb60270e8653bda3f339e3a07ce2cd2d6eb0 Mon Sep 17 00:00:00 2001
+From: Will Dietz <w@wdtz.org>
+Date: Tue, 17 Oct 2017 23:01:36 -0500
+Subject: [PATCH] glucose: use fenv to set double precision
+
+---
+ core/Main.cc   | 8 ++++++--
+ simp/Main.cc   | 8 ++++++--
+ utils/System.h | 2 +-
+ 3 files changed, 13 insertions(+), 5 deletions(-)
+
+diff --git a/core/Main.cc b/core/Main.cc
+index c96aadd..994132b 100644
+--- a/core/Main.cc
++++ b/core/Main.cc
+@@ -96,8 +96,12 @@ int main(int argc, char** argv)
+         // printf("This is MiniSat 2.0 beta\n");
+         
+ #if defined(__linux__)
+-        fpu_control_t oldcw, newcw;
+-        _FPU_GETCW(oldcw); newcw = (oldcw & ~_FPU_EXTENDED) | _FPU_DOUBLE; _FPU_SETCW(newcw);
++        fenv_t fenv;
++
++        fegetenv(&fenv);
++        fenv.__control_word &= ~0x300; /* _FPU_EXTENDED */
++        fenv.__control_word |= 0x200; /* _FPU_DOUBLE */
++        fesetenv(&fenv);
+         printf("c WARNING: for repeatability, setting FPU to use double precision\n");
+ #endif
+         // Extra options:
+diff --git a/simp/Main.cc b/simp/Main.cc
+index 4f4772d..70c2e4b 100644
+--- a/simp/Main.cc
++++ b/simp/Main.cc
+@@ -97,8 +97,12 @@ int main(int argc, char** argv)
+         
+         
+ #if defined(__linux__)
+-        fpu_control_t oldcw, newcw;
+-        _FPU_GETCW(oldcw); newcw = (oldcw & ~_FPU_EXTENDED) | _FPU_DOUBLE; _FPU_SETCW(newcw);
++        fenv_t fenv;
++
++        fegetenv(&fenv);
++        fenv.__control_word &= ~0x300; /* _FPU_EXTENDED */
++        fenv.__control_word |= 0x200; /* _FPU_DOUBLE */
++        fesetenv(&fenv);
+         printf("WARNING: for repeatability, setting FPU to use double precision\n");
+ #endif
+         // Extra options:
+diff --git a/utils/System.h b/utils/System.h
+index 004d498..a768e99 100644
+--- a/utils/System.h
++++ b/utils/System.h
+@@ -22,7 +22,7 @@ OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWA
+ #define Glucose_System_h
+ 
+ #if defined(__linux__)
+-#include <fpu_control.h>
++#include <fenv.h>
+ #endif
+ 
+ #include "glucose/mtl/IntTypes.h"
+-- 
+2.14.2
+
diff --git a/pkgs/applications/science/logic/avy/minisat-fenv.patch b/pkgs/applications/science/logic/avy/minisat-fenv.patch
new file mode 100644
index 000000000000..686d5a1c5b49
--- /dev/null
+++ b/pkgs/applications/science/logic/avy/minisat-fenv.patch
@@ -0,0 +1,65 @@
+From 7f1016ceab9b0f57a935bd51ca6df3d18439b472 Mon Sep 17 00:00:00 2001
+From: Will Dietz <w@wdtz.org>
+Date: Tue, 17 Oct 2017 22:57:02 -0500
+Subject: [PATCH] use fenv instead of non-standard fpu_control
+
+---
+ core/Main.cc   | 8 ++++++--
+ simp/Main.cc   | 8 ++++++--
+ utils/System.h | 2 +-
+ 3 files changed, 13 insertions(+), 5 deletions(-)
+
+diff --git a/core/Main.cc b/core/Main.cc
+index 2b0d97b..8ad95fb 100644
+--- a/core/Main.cc
++++ b/core/Main.cc
+@@ -78,8 +78,12 @@ int main(int argc, char** argv)
+         // printf("This is MiniSat 2.0 beta\n");
+         
+ #if defined(__linux__)
+-        fpu_control_t oldcw, newcw;
+-        _FPU_GETCW(oldcw); newcw = (oldcw & ~_FPU_EXTENDED) | _FPU_DOUBLE; _FPU_SETCW(newcw);
++        fenv_t fenv;
++
++        fegetenv(&fenv);
++        fenv.__control_word &= ~0x300; /* _FPU_EXTENDED */
++        fenv.__control_word |= 0x200; /* _FPU_DOUBLE */
++        fesetenv(&fenv);
+         printf("WARNING: for repeatability, setting FPU to use double precision\n");
+ #endif
+         // Extra options:
+diff --git a/simp/Main.cc b/simp/Main.cc
+index 2804d7f..39bfb71 100644
+--- a/simp/Main.cc
++++ b/simp/Main.cc
+@@ -79,8 +79,12 @@ int main(int argc, char** argv)
+         // printf("This is MiniSat 2.0 beta\n");
+         
+ #if defined(__linux__)
+-        fpu_control_t oldcw, newcw;
+-        _FPU_GETCW(oldcw); newcw = (oldcw & ~_FPU_EXTENDED) | _FPU_DOUBLE; _FPU_SETCW(newcw);
++        fenv_t fenv;
++
++        fegetenv(&fenv);
++        fenv.__control_word &= ~0x300; /* _FPU_EXTENDED */
++        fenv.__control_word |= 0x200; /* _FPU_DOUBLE */
++        fesetenv(&fenv);
+         printf("WARNING: for repeatability, setting FPU to use double precision\n");
+ #endif
+         // Extra options:
+diff --git a/utils/System.h b/utils/System.h
+index 1758192..c0ad13a 100644
+--- a/utils/System.h
++++ b/utils/System.h
+@@ -22,7 +22,7 @@ OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWA
+ #define Minisat_System_h
+ 
+ #if defined(__linux__)
+-#include <fpu_control.h>
++#include <fenv.h>
+ #endif
+ 
+ #include "mtl/IntTypes.h"
+-- 
+2.14.2
+
diff --git a/pkgs/applications/science/logic/boolector/default.nix b/pkgs/applications/science/logic/boolector/default.nix
index 2b40995b7433..aa815e48db41 100644
--- a/pkgs/applications/science/logic/boolector/default.nix
+++ b/pkgs/applications/science/logic/boolector/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl }:
+{ stdenv, fetchurl, writeShellScriptBin }:
 
 stdenv.mkDerivation rec {
   name    = "boolector-${version}";
@@ -8,6 +8,24 @@ stdenv.mkDerivation rec {
     sha256 = "0mdf7hwix237pvknvrpazcx6s3ininj5k7vhysqjqgxa7lxgq045";
   };
 
+  prePatch =
+    let
+      lingelingPatch = writeShellScriptBin "lingeling-patch" ''
+        sed -i -e "1i#include <stdint.h>" lingeling/lglib.h
+
+        ${crossFix}/bin/crossFix lingeling
+      '';
+      crossFix = writeShellScriptBin "crossFix" ''
+        # substituteInPlace not available here
+        sed -i $1/makefile.in \
+          -e 's@ar rc@$(AR) rc@' \
+          -e 's@ranlib@$(RANLIB)@'
+      '';
+    in ''
+    sed -i -e 's@mv lingeling\* lingeling@\0 \&\& ${lingelingPatch}/bin/lingeling-patch@' makefile
+    sed -i -e 's@mv boolector\* boolector@\0 \&\& ${crossFix}/bin/crossFix boolector@' makefile
+  '';
+
   installPhase = ''
     mkdir $out
     mv boolector/bin $out
diff --git a/pkgs/applications/science/logic/coq/default.nix b/pkgs/applications/science/logic/coq/default.nix
index 9ed535cfe639..fb75a9dc6097 100644
--- a/pkgs/applications/science/logic/coq/default.nix
+++ b/pkgs/applications/science/logic/coq/default.nix
@@ -21,6 +21,7 @@ let
    "8.6.1"     = "0llrxcxwy5j87vbbjnisw42rfw1n1pm5602ssx64xaxx3k176g6l";
    "8.7.0"     = "1h18b7xpnx3ix9vsi5fx4zdcbxy7bhra7gd5c5yzxmk53cgf1p9m";
    "8.7.1"     = "0gjn59jkbxwrihk8fx9d823wjyjh5m9gvj9l31nv6z6bcqhgdqi8";
+   "8.7.2"     = "0a0657xby8wdq4aqb2xsxp3n7pmc2w4yxjmrb2l4kccs1aqvaj4w";
   }."${version}";
   coq-version = builtins.substring 0 3 version;
   camlp5 = ocamlPackages.camlp5_strict;
diff --git a/pkgs/applications/science/logic/cvc4/default.nix b/pkgs/applications/science/logic/cvc4/default.nix
index 6b213226635d..403eff216f53 100644
--- a/pkgs/applications/science/logic/cvc4/default.nix
+++ b/pkgs/applications/science/logic/cvc4/default.nix
@@ -22,10 +22,17 @@ stdenv.mkDerivation rec {
     "--with-boost=${boost.dev}"
   ];
 
+  prePatch = ''
+    patch -p1 -i ${./minisat-fenv.patch} -d src/prop/minisat
+    patch -p1 -i ${./minisat-fenv.patch} -d src/prop/bvminisat
+  '';
+
   preConfigure = ''
     patchShebangs ./src/
   '';
 
+  enableParallelBuilding = true;
+
   meta = with stdenv.lib; {
     description = "A high-performance theorem prover and SMT solver";
     homepage    = http://cvc4.cs.nyu.edu/web/;
diff --git a/pkgs/applications/science/logic/cvc4/minisat-fenv.patch b/pkgs/applications/science/logic/cvc4/minisat-fenv.patch
new file mode 100644
index 000000000000..686d5a1c5b49
--- /dev/null
+++ b/pkgs/applications/science/logic/cvc4/minisat-fenv.patch
@@ -0,0 +1,65 @@
+From 7f1016ceab9b0f57a935bd51ca6df3d18439b472 Mon Sep 17 00:00:00 2001
+From: Will Dietz <w@wdtz.org>
+Date: Tue, 17 Oct 2017 22:57:02 -0500
+Subject: [PATCH] use fenv instead of non-standard fpu_control
+
+---
+ core/Main.cc   | 8 ++++++--
+ simp/Main.cc   | 8 ++++++--
+ utils/System.h | 2 +-
+ 3 files changed, 13 insertions(+), 5 deletions(-)
+
+diff --git a/core/Main.cc b/core/Main.cc
+index 2b0d97b..8ad95fb 100644
+--- a/core/Main.cc
++++ b/core/Main.cc
+@@ -78,8 +78,12 @@ int main(int argc, char** argv)
+         // printf("This is MiniSat 2.0 beta\n");
+         
+ #if defined(__linux__)
+-        fpu_control_t oldcw, newcw;
+-        _FPU_GETCW(oldcw); newcw = (oldcw & ~_FPU_EXTENDED) | _FPU_DOUBLE; _FPU_SETCW(newcw);
++        fenv_t fenv;
++
++        fegetenv(&fenv);
++        fenv.__control_word &= ~0x300; /* _FPU_EXTENDED */
++        fenv.__control_word |= 0x200; /* _FPU_DOUBLE */
++        fesetenv(&fenv);
+         printf("WARNING: for repeatability, setting FPU to use double precision\n");
+ #endif
+         // Extra options:
+diff --git a/simp/Main.cc b/simp/Main.cc
+index 2804d7f..39bfb71 100644
+--- a/simp/Main.cc
++++ b/simp/Main.cc
+@@ -79,8 +79,12 @@ int main(int argc, char** argv)
+         // printf("This is MiniSat 2.0 beta\n");
+         
+ #if defined(__linux__)
+-        fpu_control_t oldcw, newcw;
+-        _FPU_GETCW(oldcw); newcw = (oldcw & ~_FPU_EXTENDED) | _FPU_DOUBLE; _FPU_SETCW(newcw);
++        fenv_t fenv;
++
++        fegetenv(&fenv);
++        fenv.__control_word &= ~0x300; /* _FPU_EXTENDED */
++        fenv.__control_word |= 0x200; /* _FPU_DOUBLE */
++        fesetenv(&fenv);
+         printf("WARNING: for repeatability, setting FPU to use double precision\n");
+ #endif
+         // Extra options:
+diff --git a/utils/System.h b/utils/System.h
+index 1758192..c0ad13a 100644
+--- a/utils/System.h
++++ b/utils/System.h
+@@ -22,7 +22,7 @@ OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWA
+ #define Minisat_System_h
+ 
+ #if defined(__linux__)
+-#include <fpu_control.h>
++#include <fenv.h>
+ #endif
+ 
+ #include "mtl/IntTypes.h"
+-- 
+2.14.2
+
diff --git a/pkgs/applications/science/logic/eprover/default.nix b/pkgs/applications/science/logic/eprover/default.nix
index 79c3b74e496b..44328eeb6bbb 100644
--- a/pkgs/applications/science/logic/eprover/default.nix
+++ b/pkgs/applications/science/logic/eprover/default.nix
@@ -1,4 +1,5 @@
 { stdenv, fetchurl, which }:
+
 stdenv.mkDerivation rec {
   name = "eprover-${version}";
   version = "2.0";
@@ -11,7 +12,7 @@ stdenv.mkDerivation rec {
   buildInputs = [ which ];
 
   preConfigure = ''
-    sed -e 's/ *CC *= gcc$//' -i Makefile.vars
+    sed -e 's/ *CC *= *gcc$//' -i Makefile.vars
   '';
   configureFlags = "--exec-prefix=$(out) --man-prefix=$(out)/share/man";
 
diff --git a/pkgs/applications/science/logic/picosat/default.nix b/pkgs/applications/science/logic/picosat/default.nix
index e026cfad218e..db252f97916a 100644
--- a/pkgs/applications/science/logic/picosat/default.nix
+++ b/pkgs/applications/science/logic/picosat/default.nix
@@ -9,6 +9,14 @@ stdenv.mkDerivation rec {
     sha256 = "0m578rpa5rdn08d10kr4lbsdwp4402hpavrz6n7n53xs517rn5hm";
   };
 
+  prePatch = ''
+    substituteInPlace picosat.c --replace "sys/unistd.h" "unistd.h"
+
+    substituteInPlace makefile.in \
+      --replace 'ar rc' '$(AR) rc' \
+      --replace 'ranlib' '$(RANLIB)'
+  '';
+
   configurePhase = "./configure.sh --shared --trace";
 
   installPhase = ''
diff --git a/pkgs/applications/science/logic/z3/default.nix b/pkgs/applications/science/logic/z3/default.nix
index 532df11209b8..5eda2da60566 100644
--- a/pkgs/applications/science/logic/z3/default.nix
+++ b/pkgs/applications/science/logic/z3/default.nix
@@ -1,8 +1,6 @@
-{ stdenv, fetchFromGitHub, python2, fixDarwinDylibNames }:
+{ stdenv, fetchFromGitHub, python, fixDarwinDylibNames }:
 
-let
-  python = python2;
-in stdenv.mkDerivation rec {
+stdenv.mkDerivation rec {
   name = "z3-${version}";
   version = "4.6.0";
 
@@ -14,6 +12,7 @@ in stdenv.mkDerivation rec {
   };
 
   buildInputs = [ python fixDarwinDylibNames ];
+  propagatedBuildInputs = [ python.pkgs.setuptools ];
   enableParallelBuilding = true;
 
   configurePhase = ''
diff --git a/pkgs/applications/science/math/R/default.nix b/pkgs/applications/science/math/R/default.nix
index 725b3f342c3e..7bd19cfc520e 100644
--- a/pkgs/applications/science/math/R/default.nix
+++ b/pkgs/applications/science/math/R/default.nix
@@ -1,7 +1,7 @@
 { stdenv, fetchurl, bzip2, gfortran, libX11, libXmu, libXt, libjpeg, libpng
 , libtiff, ncurses, pango, pcre, perl, readline, tcl, texLive, tk, xz, zlib
 , less, texinfo, graphviz, icu, pkgconfig, bison, imake, which, jdk, openblas
-, curl, Cocoa, Foundation, cf-private, libobjc, tzdata, fetchpatch
+, curl, Cocoa, Foundation, cf-private, libobjc, libcxx, tzdata, fetchpatch
 , withRecommendedPackages ? true
 , enableStrictBarrier ? false
 }:
@@ -19,7 +19,7 @@ stdenv.mkDerivation rec {
     pango pcre perl readline texLive xz zlib less texinfo graphviz icu
     pkgconfig bison imake which jdk openblas curl
   ] ++ stdenv.lib.optionals (!stdenv.isDarwin) [ tcl tk ]
-    ++ stdenv.lib.optionals stdenv.isDarwin [ Cocoa Foundation libobjc ];
+    ++ stdenv.lib.optionals stdenv.isDarwin [ Cocoa Foundation libobjc libcxx ];
 
   patches = [ ./no-usr-local-search-paths.patch ];
 
@@ -55,6 +55,8 @@ stdenv.mkDerivation rec {
       --without-aqua
       --disable-R-framework
       OBJC="clang"
+      CPPFLAGS="-isystem ${libcxx}/include/c++/v1"
+      LDFLAGS="-L${libcxx}/lib"
   '' + ''
     )
     echo >>etc/Renviron.in "TCLLIBPATH=${tk}/lib"
diff --git a/pkgs/applications/science/math/bcal/default.nix b/pkgs/applications/science/math/bcal/default.nix
new file mode 100644
index 000000000000..baede83f6514
--- /dev/null
+++ b/pkgs/applications/science/math/bcal/default.nix
@@ -0,0 +1,33 @@
+{ stdenv, fetchFromGitHub, python3Packages }:
+
+with stdenv.lib;
+
+stdenv.mkDerivation rec {
+  name = "bcal-${version}";
+  version = "1.7";
+
+  src = fetchFromGitHub {
+    owner = "jarun";
+    repo = "bcal";
+    rev = "v${version}";
+    sha256 = "08cqp2jysvy743gmwpzkbqhybsb49n65r63z3if53m3y59qg4aw8";
+  };
+
+  nativeBuildInputs = [ python3Packages.pytest ];
+
+  doCheck = true;
+  checkPhase = ''
+    python3 -m pytest test.py
+  '';
+
+  makeFlags = [ "CC=cc" ];
+  installFlags = [ "DESTDIR=$(out)" "PREFIX=" ];
+
+  meta = {
+    description = "Storage conversion and expression calculator";
+    homepage = https://github.com/jarun/bcal;
+    license = licenses.gpl3;
+    platforms = [ "x86_64-darwin" "x86_64-linux" ];
+    maintainers = with maintainers; [ jfrankenau ];
+  };
+}
diff --git a/pkgs/applications/science/math/sage/default.nix b/pkgs/applications/science/math/sage/default.nix
index 686e93b5d5e2..ee646fee2c25 100644
--- a/pkgs/applications/science/math/sage/default.nix
+++ b/pkgs/applications/science/math/sage/default.nix
@@ -29,6 +29,7 @@
 , texlive
 , texinfo
 , hevea
+, buildDocs ? false
 }:
 
 stdenv.mkDerivation rec {
@@ -87,7 +88,7 @@ stdenv.mkDerivation rec {
     # Sage installs during first `make`, `make install` is no-op and just takes time.
   '';
 
-  outputs = [ "out" "doc" ];
+  outputs = [ "out" ] ++ stdenv.lib.optionals (buildDocs) [ "doc" ];
 
   buildInputs = [
     bash # needed for the build
@@ -135,13 +136,16 @@ stdenv.mkDerivation rec {
     # TODO could be patched with `sed s|printf(ctime(\(.*\)))|%s... or fixed upstream
   ];
 
+  configureFlags = stdenv.lib.optionals(buildDocs) [ "--docdir=$(doc)" ];
   preConfigure = ''
-    export SAGE_NUM_THREADS=$NIX_BUILD_CORES
+    export SAGE_NUM_THREADS="$NIX_BUILD_CORES"
     export SAGE_ATLAS_ARCH=fast
 
-    export HOME=$out/sage-home
-    mkdir -p $out/sage-home
+    export HOME=/tmp/sage-home
+    export SAGE_ROOT="$PWD"
+    export SAGE_SRC="$PWD"
 
+    mkdir -p "$HOME"
     mkdir -p "$out"
 
     # we need to keep the source around
@@ -150,12 +154,18 @@ stdenv.mkDerivation rec {
     mv "$dir" "$out/sage-root"
 
     cd "$out/sage-root" # build in target dir, since `make` is also `make install`
+  ''
+  + stdenv.lib.optionalString (buildDocs) ''
+    mkdir -p "$doc"
+    export SAGE_DOC="$doc"
+    export SAGE_DOCBUILD_OPTS="--no-pdf-links -k"
+    export SAGE_SPKG_INSTALL_DOCS='no'
   '';
 
+  buildFlags = if (buildDocs) then "doc" else "build";
+
   # for reference: http://doc.sagemath.org/html/en/installation/source.html
   preBuild = ''
-    # TODO do this conditionally
-    export SAGE_SPKG_INSTALL_DOCS='no'
     # symlink python to make sure the shebangs are patched to the sage path
     # while still being able to use python before building it
     # (this is important because otherwise sage will try to install python
@@ -167,10 +177,15 @@ stdenv.mkDerivation rec {
   '';
 
   postBuild = ''
+    # Clean up
     rm -r "$out/sage-root/upstream" # don't keep the sources of all the spkgs
-    rm -r "$out/sage-root/src/build"
-    rm -rf "$out/sage-root/src/.git"
+    rm -rf "$out/sage-root/src/build"
+    rm -rf "$out/sage-root/src/autom4te.cache"
+    rm -rf "$out/sage-root/src/config"
+    rm -rf "$out/sage-root/src/m4"
+    rm -rf "$out/sage-root/.git"
     rm -r "$out/sage-root/logs"
+    rm -r "$out"/lib/python*/test
     # Fix dependency cycle between out and doc
     rm -f "$out/sage-root/config.log"
     rm -f "$out/sage-root/config.status"
diff --git a/pkgs/applications/science/math/sage/spkg-giac.patch b/pkgs/applications/science/math/sage/spkg-giac.patch
index 15b91433d254..c79d4422133d 100644
--- a/pkgs/applications/science/math/sage/spkg-giac.patch
+++ b/pkgs/applications/science/math/sage/spkg-giac.patch
@@ -1,10 +1,19 @@
---- old/build/pkgs/giac/spkg-install	2017-07-21 14:10:00.000000000 -0500
-+++ new/build/pkgs/giac/spkg-install	2017-10-15 15:55:55.321237645 -0500
-@@ -4,6 +4,8 @@
+diff --git a/build/pkgs/giac/spkg-install b/build/pkgs/giac/spkg-install
+index bdd8df6cb8..3fd7a3ef8a 100644
+--- a/build/pkgs/giac/spkg-install
++++ b/build/pkgs/giac/spkg-install
+@@ -2,6 +2,15 @@
  ## Giac
  ###########################################
  
-+find . -type f -exec sed -e 's@/bin/cp@cp@g' -i '{}' ';' && echo "Patching input parser" && find . -iname 'input_parser.cc'
++# Fix hardcoded paths, while making sure to only update timestamps of actually
++# changed files (otherwise confuses make)
++grep -rlF '/bin/cp' . | while read file
++do
++	sed -e 's@/bin/cp@cp@g' -i "$file"
++done
++
++# Fix input parser syntax
 +sed -e 's@yylex (&yylval)@yylex (\&yyval, scanner)@gp' -i 'src/src/input_parser.cc'
  
  if [ "$SAGE_LOCAL" = "" ]; then
diff --git a/pkgs/applications/science/math/sage/spkg-git.patch b/pkgs/applications/science/math/sage/spkg-git.patch
index ff9a7b2e491a..74f552dd3c36 100644
--- a/pkgs/applications/science/math/sage/spkg-git.patch
+++ b/pkgs/applications/science/math/sage/spkg-git.patch
@@ -1,12 +1,17 @@
 diff --git a/build/pkgs/git/spkg-install b/build/pkgs/git/spkg-install
-index 8469cb58c2..d0dc9a1db9 100755
+index 87874de3d8..b0906245fa 100644
 --- a/build/pkgs/git/spkg-install
 +++ b/build/pkgs/git/spkg-install
-@@ -35,6 +35,8 @@ fi
+@@ -33,6 +33,13 @@ fi
  
  cd src
  
-+find . -type f -exec sed -e 's@/usr/bin/perl@perl@g' -i '{}' ';'
++# Fix hardcoded paths, while making sure to only update timestamps of actually
++# changed files (otherwise confuses make)
++grep -rlF '/usr/bin/perl' . | while read file
++do
++	sed -e 's@/usr/bin/perl@perl@g' -i "$file"
++done
 +
  # We don't want to think about Fink or Macports
  export NO_FINK=1
diff --git a/pkgs/applications/science/math/sage/spkg-singular.patch b/pkgs/applications/science/math/sage/spkg-singular.patch
index d561768600b4..606ffcd3ad4e 100644
--- a/pkgs/applications/science/math/sage/spkg-singular.patch
+++ b/pkgs/applications/science/math/sage/spkg-singular.patch
@@ -1,11 +1,17 @@
---- old/build/pkgs/singular/spkg-install	2017-10-15 10:35:41.826540964 -0500
-+++ new/build/pkgs/singular/spkg-install	2017-10-15 10:36:40.613743443 -0500
-@@ -4,6 +4,9 @@
+diff --git a/build/pkgs/singular/spkg-install b/build/pkgs/singular/spkg-install
+index 8caafb1699..3c34e6608a 100644
+--- a/build/pkgs/singular/spkg-install
++++ b/build/pkgs/singular/spkg-install
+@@ -2,6 +2,13 @@
  ## Singular
  ###########################################
  
-+find . -type f -exec sed -e 's@/bin/rm@rm@g' -i '{}' ';'
-+#echo '#!/usr/bin/env bash\nIgnoring missing $1' > src/build-aux/missing
++# Fix hardcoded paths, while making sure to only update timestamps of actually
++# changed files (otherwise confuses make)
++grep -rlF '/bin/rm' . | while read file
++do
++	sed -e 's@/bin/rm@rm@g' -i "$file"
++done
 +
  if [ -z "$SAGE_LOCAL" ]; then
      echo >&2 "Error: SAGE_LOCAL undefined -- exiting..."
diff --git a/pkgs/applications/science/spyder/default.nix b/pkgs/applications/science/spyder/default.nix
index 0952b61551e3..04a5def81e69 100644
--- a/pkgs/applications/science/spyder/default.nix
+++ b/pkgs/applications/science/spyder/default.nix
@@ -1,7 +1,7 @@
 { stdenv, fetchPypi, unzip, buildPythonApplication, makeDesktopItem
 # mandatory
-, qtpy, numpydoc, qtconsole, qtawesome, jedi, pycodestyle, psutil
-, pyflakes, rope, sphinx, nbconvert, mccabe
+, numpydoc, qtconsole, qtawesome, jedi, pycodestyle, psutil
+, pyflakes, rope, sphinx, nbconvert, mccabe, pyopengl, cloudpickle
 # optional
 , numpy ? null, scipy ? null, matplotlib ? null
 # optional
@@ -10,17 +10,21 @@
 
 buildPythonApplication rec {
   pname = "spyder";
-  version = "3.2.4";
-  namePrefix = "";
+  version = "3.2.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "028hg71gfq2yrplwhhl7hl4rbwji1l0zxzghblwmb0i443ki10v3";
+    sha256 = "87d6a4f5ee1aac4284461ee3584c3ade50cb53feb3fe35abebfdfb9be18c526a";
   };
 
+  # Somehow setuptools can't find pyqt5. Maybe because the dist-info folder is missing?
+  postPatch = ''
+    substituteInPlace setup.py --replace 'pyqt5;python_version>="3"' ' '
+  '';
+
   propagatedBuildInputs = [
-    jedi pycodestyle psutil qtpy pyflakes rope numpy scipy matplotlib pylint
-    numpydoc qtconsole qtawesome nbconvert mccabe
+    jedi pycodestyle psutil pyflakes rope numpy scipy matplotlib pylint
+    numpydoc qtconsole qtawesome nbconvert mccabe pyopengl cloudpickle
   ];
 
   # There is no test for spyder
diff --git a/pkgs/applications/search/catfish/default.nix b/pkgs/applications/search/catfish/default.nix
index f6df5fc496d7..c355b193dfd1 100644
--- a/pkgs/applications/search/catfish/default.nix
+++ b/pkgs/applications/search/catfish/default.nix
@@ -1,15 +1,17 @@
-{ stdenv, fetchurl, file, which, intltool, findutils, xdg_utils,
-  gnome3, pythonPackages, wrapGAppsHook }:
+{ stdenv, fetchurl, file, which, intltool, gobjectIntrospection,
+  findutils, xdg_utils, gnome3, pythonPackages, hicolor_icon_theme,
+  wrapGAppsHook
+}:
 
 pythonPackages.buildPythonApplication rec {
   majorver = "1.4";
-  minorver = "2";
+  minorver = "4";
   version = "${majorver}.${minorver}";
-  name = "catfish-${version}";
+  pname = "catfish";
 
   src = fetchurl {
-    url = "https://launchpad.net/catfish-search/${majorver}/${version}/+download/${name}.tar.bz2";
-    sha256 = "0j3by9yfs4j9za3s5qdxrsm7idmps69pimc9d0mjyakvviy0izm3";
+    url = "https://launchpad.net/catfish-search/${majorver}/${version}/+download/${pname}-${version}.tar.gz";
+    sha256 = "1mw7py6si6y88jblmzm04hf049bpww7h87k2wypq07zm1dw55m52";
   };
 
   nativeBuildInputs = [
@@ -17,6 +19,7 @@ pythonPackages.buildPythonApplication rec {
     file
     which
     intltool
+    gobjectIntrospection
     wrapGAppsHook
   ];
 
@@ -26,6 +29,7 @@ pythonPackages.buildPythonApplication rec {
     pythonPackages.pyxdg
     pythonPackages.ptyprocess
     pythonPackages.pycairo
+    hicolor_icon_theme
   ];
 
   propagatedBuildInputs = [
@@ -35,17 +39,20 @@ pythonPackages.buildPythonApplication rec {
     findutils
   ];
 
-  preFixup = ''
-    rm "$out/${pythonPackages.python.sitePackages}/catfish_lib/catfishconfig.pyc"
-    for f in \
-      "$out/${pythonPackages.python.sitePackages}/catfish_lib/catfishconfig.py" \
-      "$out/share/applications/catfish.desktop"
-    do
-      substituteInPlace $f --replace "${pythonPackages.python}" "$out"
-    done
+  # Explicitly set the prefix dir in "setup.py" because setuptools is
+  # not using "$out" as the prefix when installing catfish data. In
+  # particular the variable "__catfish_data_directory__" in
+  # "catfishconfig.py" is being set to a subdirectory in the python
+  # path in the store.
+  postPatch = ''
+    sed -i "/^        if self.root/i\\        self.prefix = \"$out\"" setup.py
   '';
 
+  # Disable check because there is no test in the source distribution
+  doCheck = false;
+
   meta = with stdenv.lib; {
+    homepage = https://launchpad.net/catfish-search;
     description = "A handy file search tool";
     longDescription = ''
       Catfish is a handy file searching tool. The interface is
@@ -53,7 +60,6 @@ pythonPackages.buildPythonApplication rec {
       You can configure it to your needs by using several command line
       options.
     '';
-    homepage = https://launchpad.net/catfish-search;
     license = licenses.gpl2Plus;
     platforms = platforms.unix;
     maintainers = [ maintainers.romildo ];
diff --git a/pkgs/applications/version-management/git-and-tools/bfg-repo-cleaner/default.nix b/pkgs/applications/version-management/git-and-tools/bfg-repo-cleaner/default.nix
index b2a4bc66c699..7bf83b5621b5 100644
--- a/pkgs/applications/version-management/git-and-tools/bfg-repo-cleaner/default.nix
+++ b/pkgs/applications/version-management/git-and-tools/bfg-repo-cleaner/default.nix
@@ -1,7 +1,7 @@
 { stdenv, fetchurl, jre, makeWrapper }:
 
 let
-  version = "1.12.15";
+  version = "1.13.0";
   jarName = "bfg-${version}.jar";
   mavenUrl = "http://central.maven.org/maven2/com/madgag/bfg/${version}/${jarName}";
 in
@@ -12,7 +12,7 @@ in
 
     src = fetchurl {
       url = mavenUrl;
-      sha256 = "17dh25jambkk55khknlhy8wa9s1i1xmh9hdgj72j1lzyl0ag42ik";
+      sha256 = "1kn84rsvms1v5l1j2xgrk7dc7mnsmxkc6sqd94mnim22vnwvl8mz";
     };
 
     buildInputs = [ jre makeWrapper ];
diff --git a/pkgs/applications/version-management/git-and-tools/default.nix b/pkgs/applications/version-management/git-and-tools/default.nix
index 96e2220f5827..e5e36e998ace 100644
--- a/pkgs/applications/version-management/git-and-tools/default.nix
+++ b/pkgs/applications/version-management/git-and-tools/default.nix
@@ -117,7 +117,7 @@ rec {
     git = gitSVN;
   };
 
-  svn2git_kde = callPackage ./svn2git-kde { };
+  svn_all_fast_export = libsForQt5.callPackage ./svn-all-fast-export { };
 
   tig = callPackage ./tig { };
 
diff --git a/pkgs/applications/version-management/git-and-tools/git-dit/default.nix b/pkgs/applications/version-management/git-and-tools/git-dit/default.nix
index 6fb9f5e36f1a..d81049951522 100644
--- a/pkgs/applications/version-management/git-and-tools/git-dit/default.nix
+++ b/pkgs/applications/version-management/git-and-tools/git-dit/default.nix
@@ -41,6 +41,6 @@ buildRustPackage rec {
     inherit (src.meta) homepage;
     description = "Decentralized Issue Tracking for git";
     license = licenses.gpl2;
-    maintainers = with maintainers; [ profpatsch matthiasbeyer ];
+    maintainers = with maintainers; [ Profpatsch matthiasbeyer ];
   };
 }
diff --git a/pkgs/applications/version-management/git-and-tools/git/default.nix b/pkgs/applications/version-management/git-and-tools/git/default.nix
index 8b64e2d375bb..e545cb33befe 100644
--- a/pkgs/applications/version-management/git-and-tools/git/default.nix
+++ b/pkgs/applications/version-management/git-and-tools/git/default.nix
@@ -13,7 +13,7 @@
 }:
 
 let
-  version = "2.16.1";
+  version = "2.16.2";
   svn = subversionClient.override { perlBindings = true; };
 in
 
@@ -22,7 +22,7 @@ stdenv.mkDerivation {
 
   src = fetchurl {
     url = "https://www.kernel.org/pub/software/scm/git/git-${version}.tar.xz";
-    sha256 = "06gay8k29glg4giwphjalcc1fknxw4bmxkmbr3ic3gzxy8vl7bfg";
+    sha256 = "05y7480f2p7fkncbhf08zz56jbykcp0ia5gl6y3djs0lsa5mfq2m";
   };
 
   hardeningDisable = [ "format" ];
@@ -57,7 +57,10 @@ stdenv.mkDerivation {
   makeFlags = "prefix=\${out} PERL_PATH=${perl}/bin/perl SHELL_PATH=${stdenv.shell} "
       + (if pythonSupport then "PYTHON_PATH=${python}/bin/python" else "NO_PYTHON=1")
       + (if stdenv.isSunOS then " INSTALL=install NO_INET_NTOP= NO_INET_PTON=" else "")
-      + (if stdenv.isDarwin then " NO_APPLE_COMMON_CRYPTO=1" else " sysconfdir=/etc/ ");
+      + (if stdenv.isDarwin then " NO_APPLE_COMMON_CRYPTO=1" else " sysconfdir=/etc/ ")
+      # XXX: USE_PCRE2 might be useful in general, look into it
+      # XXX other alpine options?
+      + (if stdenv.hostPlatform.isMusl then "NO_SYS_POLL_H=1 NO_GETTEXT=YesPlease" else "");
 
   # build git-credential-osxkeychain if darwin
   postBuild = stdenv.lib.optionalString stdenv.isDarwin ''
diff --git a/pkgs/applications/version-management/git-and-tools/grv/default.nix b/pkgs/applications/version-management/git-and-tools/grv/default.nix
index cbcf4cd9aeb7..be5b58c57334 100644
--- a/pkgs/applications/version-management/git-and-tools/grv/default.nix
+++ b/pkgs/applications/version-management/git-and-tools/grv/default.nix
@@ -1,6 +1,6 @@
 { stdenv, buildGoPackage, fetchFromGitHub, curl, libgit2_0_25, ncurses, pkgconfig, readline }:
 let
-  version = "0.1.1";
+  version = "0.1.2";
 in
 buildGoPackage {
   name = "grv-${version}";
@@ -10,15 +10,16 @@ buildGoPackage {
 
   goPackagePath = "github.com/rgburke/grv";
 
-  goDeps = ./deps.nix;
-
   src = fetchFromGitHub {
     owner = "rgburke";
     repo = "grv";
     rev = "v${version}";
-    sha256 = "0q9gvxfw48d4kjpb2jx7lg577vazjg0n961y6ija5saja5n16mk2";
+    sha256 = "1i8cr5xxdacpby60nqfyj8ijyc0h62029kbds2lq26rb8nn9qih2";
+    fetchSubmodules = true;
   };
 
+  buildFlagsArray = [ "-ldflags=" "-X main.version=${version}" ];
+
   meta = with stdenv.lib; {
     description = " GRV is a terminal interface for viewing git repositories";
     homepage = https://github.com/rgburke/grv;
diff --git a/pkgs/applications/version-management/git-and-tools/grv/deps.nix b/pkgs/applications/version-management/git-and-tools/grv/deps.nix
deleted file mode 100644
index 8de555df2e8f..000000000000
--- a/pkgs/applications/version-management/git-and-tools/grv/deps.nix
+++ /dev/null
@@ -1,102 +0,0 @@
-# This file was generated by https://github.com/kamilchm/go2nix v1.2.1
-[
-  {
-    goPackagePath = "github.com/Sirupsen/logrus";
-    fetch = {
-      type = "git";
-      url = "https://github.com/Sirupsen/logrus";
-      rev = "768a92a02685ee7535069fc1581341b41bab9b72";
-      sha256 = "1m67cxb6p0zgq0xba63qb4vvy6z5d78alya0vnx5djfixygiij53";
-    };
-  }
-  {
-    goPackagePath = "github.com/bradfitz/slice";
-    fetch = {
-      type = "git";
-      url = "https://github.com/bradfitz/slice";
-      rev = "d9036e2120b5ddfa53f3ebccd618c4af275f47da";
-      sha256 = "189h48w3ppvx2kqyxq0s55kxv629lljjxbyqjnlrgg8fy6ya8wgy";
-    };
-  }
-  {
-    goPackagePath = "github.com/gobwas/glob";
-    fetch = {
-      type = "git";
-      url = "https://github.com/gobwas/glob";
-      rev = "51eb1ee00b6d931c66d229ceeb7c31b985563420";
-      sha256 = "090wzpwsjana1qas8ipwh1pj959gvc4b7vwybzi01f3bmd79jwlp";
-    };
-  }
-  {
-    goPackagePath = "github.com/mattn/go-runewidth";
-    fetch = {
-      type = "git";
-      url = "https://github.com/mattn/go-runewidth";
-      rev = "97311d9f7767e3d6f422ea06661bc2c7a19e8a5d";
-      sha256 = "0dxlrzn570xl7gb11hjy1v4p3gw3r41yvqhrffgw95ha3q9p50cg";
-    };
-  }
-  {
-    goPackagePath = "github.com/rgburke/goncurses";
-    fetch = {
-      type = "git";
-      url = "https://github.com/rgburke/goncurses";
-      rev = "9a788ac9d81e61c6a2ca6205ee8d72d738ed12b9";
-      sha256 = "0xqwxscdszbybriyzqmsd2zkzda9anckx56q8gksfy3gwj286gpb";
-    };
-  }
-  {
-    goPackagePath = "github.com/rjeczalik/notify";
-    fetch = {
-      type = "git";
-      url = "https://github.com/rjeczalik/notify";
-      rev = "27b537f07230b3f917421af6dcf044038dbe57e2";
-      sha256 = "05alsqjz2x8jzz2yp8r20zwglcg7y1ywq60zy6icj18qs3abmlp0";
-    };
-  }
-  {
-    goPackagePath = "github.com/tchap/go-patricia";
-    fetch = {
-      type = "git";
-      url = "https://github.com/tchap/go-patricia";
-      rev = "5ad6cdb7538b0097d5598c7e57f0a24072adf7dc";
-      sha256 = "0351x63zqympgfsnjl78cgvqhvipl3kfs1i15hfaw91hqin6dykr";
-    };
-  }
-  {
-    goPackagePath = "go4.org";
-    fetch = {
-      type = "git";
-      url = "https://github.com/camlistore/go4";
-      rev = "fba789b7e39ba524b9e60c45c37a50fae63a2a09";
-      sha256 = "01irxqy8na646b4zbw7v3zwy3yx9m7flhim5c3z4lzq5hiy2h75i";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/crypto";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/crypto";
-      rev = "1875d0a70c90e57f11972aefd42276df65e895b9";
-      sha256 = "1kprrdzr4i4biqn7r9gfxzsmijya06i9838skprvincdb1pm0q2q";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/sys";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/sys";
-      rev = "3dbebcf8efb6a5011a60c2b4591c1022a759af8a";
-      sha256 = "02pwjyimpm13km3fk0rg2l9p37w7qycdwp74piawwgcgh80qnww9";
-    };
-  }
-  {
-    goPackagePath = "gopkg.in/libgit2/git2go.v25";
-    fetch = {
-      type = "git";
-      url = "https://gopkg.in/libgit2/git2go.v25";
-      rev = "334260d743d713a55ff3c097ec6707f2bb39e9d5";
-      sha256 = "0hfya9z2pg29zbc0s92hj241rnbk7d90jzj34q0dp8b7akz6r1rc";
-    };
-  }
-]
diff --git a/pkgs/applications/version-management/git-and-tools/svn-all-fast-export/default.nix b/pkgs/applications/version-management/git-and-tools/svn-all-fast-export/default.nix
new file mode 100644
index 000000000000..fbafc5257d7b
--- /dev/null
+++ b/pkgs/applications/version-management/git-and-tools/svn-all-fast-export/default.nix
@@ -0,0 +1,43 @@
+{ stdenv, fetchFromGitHub, fetchpatch, qmake, qtbase, qttools, subversion, apr }:
+
+let
+  version = "1.0.11";
+in
+stdenv.mkDerivation {
+  name = "svn-all-fast-export-${version}";
+
+  src = fetchFromGitHub {
+    owner = "svn-all-fast-export";
+    repo = "svn2git";
+    rev = version;
+    sha256 = "0lhnw8f15j4wkpswhrjd7bp9xkhbk32zmszaxayzfhbdl0g7pzwj";
+  };
+
+  # https://github.com/svn-all-fast-export/svn2git/pull/40
+  patches = [
+    (fetchpatch {
+      name = "pr40.patch";
+      sha256 = "1qndhk5csf7kddk3giailx7r0cdipq46lj73nkcws43n4n93synk";
+      url = https://github.com/svn-all-fast-export/svn2git/pull/40.diff;
+    })
+  ];
+
+  nativeBuildInputs = [ qmake qttools ];
+  buildInputs = [ apr.dev subversion.dev qtbase ];
+
+  qmakeFlags = [
+    "VERSION=${version}"
+    "APR_INCLUDE=${apr.dev}/include/apr-1"
+    "SVN_INCLUDE=${subversion.dev}/include/subversion-1"
+  ];
+
+  installPhase = "make install INSTALL_ROOT=$out";
+
+  meta = with stdenv.lib; {
+    homepage = https://github.com/svn-all-fast-export/svn2git;
+    description = "A fast-import based converter for an svn repo to git repos";
+    license = licenses.gpl3;
+    platforms = platforms.all;
+    maintainers = [ maintainers.flokli ];
+  };
+}
diff --git a/pkgs/applications/version-management/git-and-tools/svn2git-kde/default.nix b/pkgs/applications/version-management/git-and-tools/svn2git-kde/default.nix
deleted file mode 100644
index e52fdb6375bf..000000000000
--- a/pkgs/applications/version-management/git-and-tools/svn2git-kde/default.nix
+++ /dev/null
@@ -1,28 +0,0 @@
-{ stdenv, fetchgit, qt4, qmake4Hook, subversion, apr }:
-
-stdenv.mkDerivation rec {
-  name = "svn2git-kde-1.0.5";
-
-  src = fetchgit {
-    url = http://git.gitorious.org/svn2git/svn2git.git;
-    rev = "149d6c6e14a1724c96999328683a9264fc508264";
-    sha256 = "0gjxhnraizlwyidn66rczwc01f6sfx4ndmsj86ssqml3p0d4sl6q";
-  };
-
-  NIX_CFLAGS_COMPILE = [ "-I${apr.dev}/include/apr-1" "-I${subversion.dev}/include/subversion-1" "-DVER=\"${src.rev}\"" ];
-
-  patchPhase = ''
-    sed -i 's|/bin/cat|cat|' ./src/repository.cpp
-  '';
-
-  installPhase = ''
-    mkdir -p $out/bin
-    cp svn-all-fast-export $out/bin
-  '';
-
-  buildInputs = [ subversion apr qt4 ];
-
-  nativeBuildInputs = [ qmake4Hook ];
-
-  meta.broken = true;
-}
diff --git a/pkgs/applications/version-management/monotone-viz/default.nix b/pkgs/applications/version-management/monotone-viz/default.nix
index c2006e9dd6bf..c24d80e3f2ef 100644
--- a/pkgs/applications/version-management/monotone-viz/default.nix
+++ b/pkgs/applications/version-management/monotone-viz/default.nix
@@ -22,15 +22,15 @@ stdenv.mkDerivation rec {
   patchFlags = ["-p0"];
   patches = [
     (fetchurl {
-      url = "http://pkgs.fedoraproject.org/cgit/rpms/monotone-viz.git/plain/monotone-viz-1.0.2-dot.patch";
+      url = "http://src.fedoraproject.org/cgit/rpms/monotone-viz.git/plain/monotone-viz-1.0.2-dot.patch";
       sha256 = "0risfy8iqmkr209hmnvpv57ywbd3rvchzzd0jy2lfyqrrrm6zknw";
     })
     (fetchurl {
-      url = "http://pkgs.fedoraproject.org/cgit/rpms/monotone-viz.git/plain/monotone-viz-1.0.2-new-stdio.patch";
+      url = "http://src.fedoraproject.org/cgit/rpms/monotone-viz.git/plain/monotone-viz-1.0.2-new-stdio.patch";
       sha256 = "16bj0ppzqd45an154dr7sifjra7lv4m9anxfw3c56y763jq7fafa";
     })
     (fetchurl {
-      url = "http://pkgs.fedoraproject.org/cgit/rpms/monotone-viz.git/plain/monotone-viz-1.0.2-typefix.patch";
+      url = "http://src.fedoraproject.org/cgit/rpms/monotone-viz.git/plain/monotone-viz-1.0.2-typefix.patch";
       sha256 = "1gfp82rc7pawb5x4hh2wf7xh1l1l54ib75930xgd1y437la4703r";
     })
   ];
diff --git a/pkgs/applications/version-management/sit/default.nix b/pkgs/applications/version-management/sit/default.nix
new file mode 100644
index 000000000000..5a4fdbe9316c
--- /dev/null
+++ b/pkgs/applications/version-management/sit/default.nix
@@ -0,0 +1,23 @@
+{ stdenv, fetchFromGitHub, rustPlatform }:
+
+rustPlatform.buildRustPackage rec {
+  name = "sit-${version}";
+  version = "0.1.2";
+
+  src = fetchFromGitHub {
+    owner = "sit-it";
+    repo = "sit";
+    rev = "v${version}";
+    sha256 = "0fvxv9x971s5qvhw6gpbw9ggsxynkwfy1fn5rln50gn9yrjf7612";
+  };
+
+  cargoSha256 = "1y8a8a9jn9f374sy5fs1snmpiqyckqc0aw7idwnpfr912c1zzrxw";
+
+  meta = with stdenv.lib; {
+    description = "SCM-agnostic, file-based, offline-first, immutable issue tracker";
+    homepage = http://sit-it.org/;
+    license = with licenses; [ asl20 /* or */ mit ];
+    maintainers = with maintainers; [ dywedir ];
+    platforms = platforms.all;
+  };
+}
diff --git a/pkgs/applications/version-management/smartgithg/default.nix b/pkgs/applications/version-management/smartgithg/default.nix
index d39c81400100..a34afbab55e6 100644
--- a/pkgs/applications/version-management/smartgithg/default.nix
+++ b/pkgs/applications/version-management/smartgithg/default.nix
@@ -8,11 +8,11 @@
 
 stdenv.mkDerivation rec {
   name = "smartgithg-${version}";
-  version = "17_1_1";
+  version = "17_1_4";
 
   src = fetchurl {
-    url = "http://www.syntevo.com/static/smart/download/smartgit/smartgit-linux-${version}.tar.gz";
-    sha256 = "1zc1cs9gxv9498jp1nhi9z70dv9dzv0yh5f3bd89wi5zvcwly3d0";
+    url = "https://www.syntevo.com/downloads/smartgit/smartgit-linux-${version}.tar.gz";
+    sha256 = "1x8s1mdxg7m3fy3izgnb1smrn4ng3q31x0sqnjlchkb5vx7gp5rh";
   };
 
   nativeBuildInputs = [ makeWrapper ];
diff --git a/pkgs/applications/version-management/tailor/default.nix b/pkgs/applications/version-management/tailor/default.nix
index 424a402780af..4d41cad0d8e6 100644
--- a/pkgs/applications/version-management/tailor/default.nix
+++ b/pkgs/applications/version-management/tailor/default.nix
@@ -7,7 +7,7 @@ python2Packages.buildPythonApplication rec {
   src = fetchurl {
     urls = [
       "http://darcs.arstecnica.it/tailor/tailor-${version}.tar.gz"
-      "http://pkgs.fedoraproject.org/repo/pkgs/tailor/tailor-${version}.tar.gz/58a6bc1c1d922b0b1e4579c6440448d1/tailor-${version}.tar.gz"
+      "http://src.fedoraproject.org/repo/pkgs/tailor/tailor-${version}.tar.gz/58a6bc1c1d922b0b1e4579c6440448d1/tailor-${version}.tar.gz"
     ];
     sha256 = "061acapxxn5ab3ipb5nd3nm8pk2xj67bi83jrfd6lqq3273fmdjh";
   };
diff --git a/pkgs/applications/video/mpv/default.nix b/pkgs/applications/video/mpv/default.nix
index dcbafd8594d3..403fc7e4ee11 100644
--- a/pkgs/applications/video/mpv/default.nix
+++ b/pkgs/applications/video/mpv/default.nix
@@ -95,6 +95,11 @@ in stdenv.mkDerivation rec {
       url = "https://github.com/mpv-player/mpv/commit/2ecf240b1cd20875991a5b18efafbe799864ff7f.patch";
       sha256 = "1sr0770rvhsgz8d7ysr9qqp4g9gwdhgj8g3rgnz90wl49lgrykhb";
     })
+    (fetchpatch {
+      name = "CVE-2018-6360.patch";
+      url = https://salsa.debian.org/multimedia-team/mpv/raw/ddface85a1adfdfe02ffb25b5ac7fac715213b97/debian/patches/09_ytdl-hook-whitelist-protocols.patch;
+      sha256 = "1gb1lkjbr8rv4v9ji6w5z97kbxbi16dbwk2255ajbvngjrc7vivv";
+    })
   ];
 
   postPatch = ''
diff --git a/pkgs/applications/video/mpv/scripts/convert.nix b/pkgs/applications/video/mpv/scripts/convert.nix
index d8f18f97ad9a..cf77e3dfe663 100644
--- a/pkgs/applications/video/mpv/scripts/convert.nix
+++ b/pkgs/applications/video/mpv/scripts/convert.nix
@@ -30,7 +30,7 @@ stdenv.mkDerivation {
   meta = {
     description = "Convert parts of a video while you are watching it in mpv";
     homepage = https://gist.github.com/Zehkul/25ea7ae77b30af959be0;
-    maintainers = [ lib.maintainers.profpatsch ];
+    maintainers = [ lib.maintainers.Profpatsch ];
     longDescription = ''
       When this script is loaded into mpv, you can hit Alt+W to mark the beginning
       and Alt+W again to mark the end of the clip. Then a settings window opens.
diff --git a/pkgs/applications/video/obs-studio/default.nix b/pkgs/applications/video/obs-studio/default.nix
index 64bdbd21686f..1c7a72d95ae1 100644
--- a/pkgs/applications/video/obs-studio/default.nix
+++ b/pkgs/applications/video/obs-studio/default.nix
@@ -29,13 +29,13 @@ let
   optional = stdenv.lib.optional;
 in stdenv.mkDerivation rec {
   name = "obs-studio-${version}";
-  version = "20.1.3";
+  version = "21.0.2";
 
   src = fetchFromGitHub {
     owner = "jp9000";
     repo = "obs-studio";
     rev = "${version}";
-    sha256 = "0qdpa2xxiiw53ksvlrf80jm8gz6kxsn56sffv2v2ijxvy7kw5zcg";
+    sha256 = "1yyvxqzxy9dz6rmjcrdn90nfaff4f38mfz2gsq535cr59sg3f8jc";
   };
 
   patches = [ ./find-xcb.patch ];
diff --git a/pkgs/applications/video/qmediathekview/default.nix b/pkgs/applications/video/qmediathekview/default.nix
new file mode 100644
index 000000000000..13f93800f6e2
--- /dev/null
+++ b/pkgs/applications/video/qmediathekview/default.nix
@@ -0,0 +1,33 @@
+{ stdenv, fetchFromGitHub, qtbase, qttools, xz, boost, qmake, pkgconfig }:
+
+stdenv.mkDerivation rec {
+  pname = "QMediathekView";
+  version = "2017-04-16";
+  name = "${pname}-${version}";
+
+  src = fetchFromGitHub {
+    owner = "adamreichold";
+    repo = pname;
+    rev = "8c69892b95bf6825bd06a8c594168a98fe7cb2d1";
+    sha256 = "1wca1w4iywd3hmiwcqx6fv79p3x5n1cgbw2liw3hs24ch3z54ckm";
+  };
+
+  postPatch = ''
+    substituteInPlace ${pname}.pro \
+      --replace /usr ""
+  '';
+
+  buildInputs = [ qtbase qttools xz boost ];
+
+  nativeBuildInputs = [ qmake pkgconfig ];
+
+  installFlags = [ "INSTALL_ROOT=$(out)" ];
+
+  meta = with stdenv.lib; {
+    description = "An alternative Qt-based front-end for the database maintained by the MediathekView project";
+    inherit (src.meta) homepage;
+    license = licenses.gpl3Plus;
+    platforms = platforms.linux;
+    maintainers = with maintainers; [ dotlambda ];
+  };
+}
diff --git a/pkgs/applications/video/subdl/default.nix b/pkgs/applications/video/subdl/default.nix
new file mode 100644
index 000000000000..32bd731f16e9
--- /dev/null
+++ b/pkgs/applications/video/subdl/default.nix
@@ -0,0 +1,26 @@
+{ stdenv, fetchFromGitHub, python3 }:
+
+stdenv.mkDerivation rec {
+  name = "subdl-0.0pre.2017.11.06";
+
+  src = fetchFromGitHub {
+    owner = "alexanderwink";
+    repo = "subdl";
+    rev = "4cf5789b11f0ff3f863b704b336190bf968cd471";
+    sha256 = "0kmk5ck1j49q4ww0lvas2767kwnzhkq0vdwkmjypdx5zkxz73fn8";
+  };
+
+  meta = {
+    homepage = https://github.com/alexanderwink/subdl;
+    description = "A command-line tool to download subtitles from opensubtitles.org";
+    platforms = stdenv.lib.platforms.all;
+    license = stdenv.lib.licenses.gpl3;
+    maintainers = [ stdenv.lib.maintainers.exfalso ];
+  };
+
+  buildInputs = [ python3 ];
+
+  installPhase = ''
+    install -vD subdl $out/bin/subdl
+  '';  
+}
diff --git a/pkgs/applications/virtualization/docker/default.nix b/pkgs/applications/virtualization/docker/default.nix
index 56436d047f2e..339d3e8490d9 100644
--- a/pkgs/applications/virtualization/docker/default.nix
+++ b/pkgs/applications/virtualization/docker/default.nix
@@ -209,14 +209,14 @@ rec {
     tiniSha256 = "0zj4kdis1vvc6dwn4gplqna0bs7v6d1y2zc8v80s3zi018inhznw";
   };
 
-  docker_18_01 = dockerGen rec {
-    version = "18.01.0-ce";
-    rev = "03596f51b120095326d2004d676e97228a21014d"; # git commit
-    sha256 = "1zffaxwkfz8ca76f5ql5z76mcjx37jbgv2kk75i68487yg16x0md";
-    runcRev = "b2567b37d7b75eb4cf325b77297b140ea686ce8f";
-    runcSha256 = "0zarsrbfcm1yp6mdl6rcrigdf7nb70xmv2cbggndz0qqyrw0mk0l";
-    containerdRev = "89623f28b87a6004d4b785663257362d1658a729";
-    containerdSha256 = "0irx7ps6rhq7z69cr3gspxdr7ywrv6dz62gkr1z2723cki9hsxma";
+  docker_18_02 = dockerGen rec {
+    version = "18.02.0-ce";
+    rev = "fc4de447b563498eb4da89f56fb858bbe761d91b"; # git commit
+    sha256 = "1025cwv2niiwg5pc30nb1qky1raisvd9ix2qw6rdib232hwq9k8m";
+    runcRev = "9f9c96235cc97674e935002fc3d78361b696a69e";
+    runcSha256 = "18f8vqdbf685dd777pjh8jzpxafw2vapqh4m43xgyi7lfwa0gsln";
+    containerdRev = "9b55aab90508bd389d7654c4baf173a981477d55";
+    containerdSha256 = "0kfafqi66yp4qy738pl11f050hfrx9m4kc670qpx7fmf9ii7q6p2";
     tiniRev = "949e6facb77383876aeff8a6944dde66b3089574";
     tiniSha256 = "0zj4kdis1vvc6dwn4gplqna0bs7v6d1y2zc8v80s3zi018inhznw";
   };
diff --git a/pkgs/applications/virtualization/looking-glass-client/default.nix b/pkgs/applications/virtualization/looking-glass-client/default.nix
index 16be0cc5b6d2..e9cee2503851 100644
--- a/pkgs/applications/virtualization/looking-glass-client/default.nix
+++ b/pkgs/applications/virtualization/looking-glass-client/default.nix
@@ -42,6 +42,6 @@ stdenv.mkDerivation rec {
     homepage = https://looking-glass.hostfission.com/;
     license = licenses.gpl2Plus;
     maintainers = [ maintainers.pneumaticat ];
-    platforms = platforms.linux;
+    platforms = [ "x86_64-linux" ];
   };
 }
diff --git a/pkgs/applications/virtualization/qemu/default.nix b/pkgs/applications/virtualization/qemu/default.nix
index 91b02f7ad1f0..694026d3bac2 100644
--- a/pkgs/applications/virtualization/qemu/default.nix
+++ b/pkgs/applications/virtualization/qemu/default.nix
@@ -18,8 +18,8 @@
 
 with stdenv.lib;
 let
-  version = "2.11.0";
-  sha256 = "1jvzw6rdhimn583dz6an8xiw07n3ycvxmj3jpv1s312scv3k9w64";
+  version = "2.11.1";
+  sha256 = "1jrcff0szyjxc3vywyiclwdzk0xgq4cxvjbvmcfyjcpdrq9j5pyr";
   audio = optionalString (hasSuffix "linux" stdenv.system) "alsa,"
     + optionalString pulseSupport "pa,"
     + optionalString sdlSupport "sdl,";
@@ -61,7 +61,7 @@ stdenv.mkDerivation rec {
 
   enableParallelBuilding = true;
 
-  patches = [ ./no-etc-install.patch ]
+  patches = [ ./no-etc-install.patch ./statfs-flags.patch ]
     ++ optional nixosTestRunner ./force-uid0-on-9p.patch
     ++ optional pulseSupport ./fix-hda-recording.patch;
 
@@ -101,6 +101,10 @@ stdenv.mkDerivation rec {
     else if stdenv.isAarch64 then ''makeWrapper $out/bin/qemu-system-aarch64 $out/bin/qemu-kvm --add-flags "\$([ -e /dev/kvm ] && echo -enable-kvm)"''
     else "";
 
+  passthru = {
+    qemu-system-i386 = "bin/qemu-system-i386";
+  };
+
   meta = with stdenv.lib; {
     homepage = http://www.qemu.org/;
     description = "A generic and open source machine emulator and virtualizer";
diff --git a/pkgs/applications/virtualization/qemu/riscv-initrd.patch b/pkgs/applications/virtualization/qemu/riscv-initrd.patch
new file mode 100644
index 000000000000..a7e5b28cfd5e
--- /dev/null
+++ b/pkgs/applications/virtualization/qemu/riscv-initrd.patch
@@ -0,0 +1,98 @@
+From 44b0f612499764dad425d467aadacb01fbd4a920 Mon Sep 17 00:00:00 2001
+From: Shea Levy <shea@shealevy.com>
+Date: Tue, 20 Feb 2018 07:59:43 -0500
+Subject: [PATCH] riscv: Respect the -initrd flag.
+
+Logic for initrd start address borrowed from arm/boot.c
+---
+ hw/riscv/virt.c | 49 ++++++++++++++++++++++++++++++++++++++++++++++---
+ 1 file changed, 46 insertions(+), 3 deletions(-)
+
+diff --git a/hw/riscv/virt.c b/hw/riscv/virt.c
+index 46d95b2b79..5c7d191a3f 100644
+--- a/hw/riscv/virt.c
++++ b/hw/riscv/virt.c
+@@ -77,7 +77,35 @@ static uint64_t load_kernel(const char *kernel_filename)
+     return kernel_entry;
+ }
+ 
+-static void create_fdt(RISCVVirtState *s, const struct MemmapEntry *memmap,
++static hwaddr load_initrd(const char *filename, uint64_t mem_size,
++                          uint64_t kernel_entry, hwaddr *start)
++{
++    int size;
++
++    /* We want to put the initrd far enough into RAM that when the
++     * kernel is uncompressed it will not clobber the initrd. However
++     * on boards without much RAM we must ensure that we still leave
++     * enough room for a decent sized initrd, and on boards with large
++     * amounts of RAM we must avoid the initrd being so far up in RAM
++     * that it is outside lowmem and inaccessible to the kernel.
++     * So for boards with less  than 256MB of RAM we put the initrd
++     * halfway into RAM, and for boards with 256MB of RAM or more we put
++     * the initrd at 128MB.
++     */
++    *start = kernel_entry + MIN(mem_size / 2, 128 * 1024 * 1024);
++
++    size = load_ramdisk(filename, *start, mem_size - *start);
++    if (size == -1) {
++        size = load_image_targphys(filename, *start, mem_size - *start);
++        if (size == -1) {
++          error_report("qemu: could not load ramdisk '%s'", filename);
++          exit(1);
++        }
++    }
++    return *start + size;
++}
++
++static void *create_fdt(RISCVVirtState *s, const struct MemmapEntry *memmap,
+     uint64_t mem_size, const char *cmdline)
+ {
+     void *fdt;
+@@ -233,6 +261,8 @@ static void create_fdt(RISCVVirtState *s, const struct MemmapEntry *memmap,
+     qemu_fdt_setprop_string(fdt, "/chosen", "stdout-path", nodename);
+     qemu_fdt_setprop_string(fdt, "/chosen", "bootargs", cmdline);
+     g_free(nodename);
++
++    return fdt;
+ }
+ 
+ static void riscv_virt_board_init(MachineState *machine)
+@@ -246,6 +276,7 @@ static void riscv_virt_board_init(MachineState *machine)
+     char *plic_hart_config;
+     size_t plic_hart_config_len;
+     int i;
++    void *fdt;
+ 
+     /* Initialize SOC */
+     object_initialize(&s->soc, sizeof(s->soc), TYPE_RISCV_HART_ARRAY);
+@@ -265,7 +296,8 @@ static void riscv_virt_board_init(MachineState *machine)
+         main_mem);
+ 
+     /* create device tree */
+-    create_fdt(s, memmap, machine->ram_size, machine->kernel_cmdline);
++    fdt = create_fdt(s, memmap, machine->ram_size,
++                     machine->kernel_cmdline);
+ 
+     /* boot rom */
+     memory_region_init_ram(boot_rom, NULL, "riscv_virt_board.bootrom",
+@@ -273,7 +305,18 @@ static void riscv_virt_board_init(MachineState *machine)
+     memory_region_add_subregion(system_memory, 0x0, boot_rom);
+ 
+     if (machine->kernel_filename) {
+-        load_kernel(machine->kernel_filename);
++        uint64_t kernel_entry = load_kernel(machine->kernel_filename);
++
++        if (machine->initrd_filename) {
++            hwaddr start;
++            hwaddr end = load_initrd(machine->initrd_filename,
++                                     machine->ram_size, kernel_entry,
++                                     &start);
++            qemu_fdt_setprop_cell(fdt, "/chosen",
++                                  "linux,initrd-start", start);
++            qemu_fdt_setprop_cell(fdt, "/chosen", "linux,initrd-end",
++                                  end);
++        }
+     }
+ 
+     /* reset vector */
diff --git a/pkgs/applications/virtualization/qemu/riscv.nix b/pkgs/applications/virtualization/qemu/riscv.nix
new file mode 100644
index 000000000000..5e234dcb8935
--- /dev/null
+++ b/pkgs/applications/virtualization/qemu/riscv.nix
@@ -0,0 +1,22 @@
+{ qemu, fetchFromGitHub, lib }: let
+  src = fetchFromGitHub {
+    owner = "riscv";
+    repo = "riscv-qemu";
+    rev = "af435b709d4a5de3ec2e59ff4dcd05b0b295a730";
+    sha256 = "1kqcsn8yfdg3zyd991i4v5dxznd1l4a4hjry9304lvsm3sz2wllw";
+    fetchSubmodules = true;
+  };
+  version = "2.11.50";
+  revCount = "58771";
+  shortRev = "af435b709d";
+  targets = [ "riscv32-linux-user" "riscv32-softmmu"
+              "riscv64-linux-user" "riscv64-softmmu"
+            ];
+in lib.overrideDerivation qemu (orig: {
+  name = "${(builtins.parseDrvName qemu.name).name}-${version}pre${revCount}_${shortRev}";
+  inherit src;
+  # https://github.com/riscv/riscv-qemu/pull/109
+  patches = orig.patches ++ [ ./riscv-initrd.patch ];
+  configureFlags = orig.configureFlags ++ [ "--target-list=${lib.concatStringsSep "," targets}" ];
+  postInstall = null;
+})
diff --git a/pkgs/applications/virtualization/qemu/statfs-flags.patch b/pkgs/applications/virtualization/qemu/statfs-flags.patch
new file mode 100644
index 000000000000..52a470a2869a
--- /dev/null
+++ b/pkgs/applications/virtualization/qemu/statfs-flags.patch
@@ -0,0 +1,197 @@
+commit 909fe47c7009aa9a75fe9470c5f8d3dd5b50917a
+Author: Shea Levy <shea@shealevy.com>
+Date:   Sun Feb 18 13:50:11 2018 -0500
+
+    linux-user: Support f_flags in statfs when available.
+    
+    Signed-off-by: Shea Levy <shea@shealevy.com>
+
+diff --git a/configure b/configure
+index 913e14839d..52fe2bf941 100755
+--- a/configure
++++ b/configure
+@@ -5303,6 +5303,22 @@ if compile_prog "" "" ; then
+     have_utmpx=yes
+ fi
+ 
++##########################################
++# Check for newer fields of struct statfs on Linux
++
++if test "$linux_user" = "yes"; then
++  cat > $TMPC <<EOF
++#include <sys/vfs.h>
++
++int main(void) {
++  struct statfs fs;
++  fs.f_flags = 0;
++}
++EOF
++  if compile_object ; then
++      have_statfs_flags=yes
++  fi
++fi
+ ##########################################
+ # checks for sanitizers
+ 
+@@ -6518,6 +6534,10 @@ if test "$have_utmpx" = "yes" ; then
+   echo "HAVE_UTMPX=y" >> $config_host_mak
+ fi
+ 
++if test "$have_statfs_flags" = "yes" ; then
++  echo "HAVE_STATFS_FLAGS=y" >> $config_host_mak
++fi
++
+ if test "$ivshmem" = "yes" ; then
+   echo "CONFIG_IVSHMEM=y" >> $config_host_mak
+ fi
+diff --git a/linux-user/syscall.c b/linux-user/syscall.c
+index 82b35a6bdf..77481eca2c 100644
+--- a/linux-user/syscall.c
++++ b/linux-user/syscall.c
+@@ -9534,6 +9534,9 @@ abi_long do_syscall(void *cpu_env, int num, abi_long arg1,
+             __put_user(stfs.f_fsid.__val[1], &target_stfs->f_fsid.val[1]);
+             __put_user(stfs.f_namelen, &target_stfs->f_namelen);
+             __put_user(stfs.f_frsize, &target_stfs->f_frsize);
++#ifdef HAVE_STATFS_FLAGS
++            __put_user(stfs.f_flags, &target_stfs->f_flags);
++#endif
+             memset(target_stfs->f_spare, 0, sizeof(target_stfs->f_spare));
+             unlock_user_struct(target_stfs, arg2, 1);
+         }
+diff --git a/linux-user/syscall_defs.h b/linux-user/syscall_defs.h
+index a35c52a60a..64aa49d3c5 100644
+--- a/linux-user/syscall_defs.h
++++ b/linux-user/syscall_defs.h
+@@ -362,7 +362,14 @@ struct kernel_statfs {
+ 	int f_ffree;
+         kernel_fsid_t f_fsid;
+ 	int f_namelen;
++#ifdef HAVE_STATFS_FLAGS
++	int f_frsize;
++	int f_flags;
++	int f_spare[4];
++#else
+ 	int f_spare[6];
++#endif
++
+ };
+ 
+ struct target_dirent {
+@@ -2223,7 +2230,12 @@ struct target_statfs {
+ 	/* Linux specials */
+ 	target_fsid_t		f_fsid;
+ 	int32_t			f_namelen;
++#ifdef HAVE_STATFS_FLAGS
++	int32_t			f_flags;
++	int32_t			f_spare[5];
++#else
+ 	int32_t			f_spare[6];
++#endif
+ };
+ #else
+ struct target_statfs {
+@@ -2239,7 +2251,12 @@ struct target_statfs {
+ 	/* Linux specials */
+ 	target_fsid_t		f_fsid;
+ 	abi_long		f_namelen;
++#ifdef HAVE_STATFS_FLAGS
++	abi_long		f_flags;
++	abi_long		f_spare[5];
++#else
+ 	abi_long		f_spare[6];
++#endif
+ };
+ #endif
+ 
+@@ -2255,7 +2272,12 @@ struct target_statfs64 {
+ 	uint64_t	f_bavail;
+ 	target_fsid_t	f_fsid;
+ 	uint32_t	f_namelen;
++#ifdef HAVE_STATFS_FLAGS
++	uint32_t	f_flags;
++	uint32_t	f_spare[5];
++#else
+ 	uint32_t	f_spare[6];
++#endif
+ };
+ #elif (defined(TARGET_PPC64) || defined(TARGET_X86_64) || \
+        defined(TARGET_SPARC64) || defined(TARGET_AARCH64)) && \
+@@ -2271,7 +2293,12 @@ struct target_statfs {
+ 	target_fsid_t f_fsid;
+ 	abi_long f_namelen;
+ 	abi_long f_frsize;
++#ifdef HAVE_STATFS_FLAGS
++	abi_long f_flags;
++	abi_long f_spare[4];
++#else
+ 	abi_long f_spare[5];
++#endif
+ };
+ 
+ struct target_statfs64 {
+@@ -2285,7 +2312,12 @@ struct target_statfs64 {
+ 	target_fsid_t f_fsid;
+ 	abi_long f_namelen;
+ 	abi_long f_frsize;
++#ifdef HAVE_STATFS_FLAGS
++	abi_long f_flags;
++	abi_long f_spare[4];
++#else
+ 	abi_long f_spare[5];
++#endif
+ };
+ #elif defined(TARGET_S390X)
+ struct target_statfs {
+@@ -2299,7 +2331,13 @@ struct target_statfs {
+     kernel_fsid_t f_fsid;
+     int32_t  f_namelen;
+     int32_t  f_frsize;
++#ifdef HAVE_STATFS_FLAGS
++    int32_t  f_flags;
++    int32_t  f_spare[4];
++#else
+     int32_t  f_spare[5];
++#endif
++
+ };
+ 
+ struct target_statfs64 {
+@@ -2313,7 +2351,12 @@ struct target_statfs64 {
+     kernel_fsid_t f_fsid;
+     int32_t  f_namelen;
+     int32_t  f_frsize;
++#ifdef HAVE_STATFS_FLAGS
++    int32_t  f_flags;
++    int32_t  f_spare[4];
++#else
+     int32_t  f_spare[5];
++#endif
+ };
+ #else
+ struct target_statfs {
+@@ -2327,7 +2370,12 @@ struct target_statfs {
+ 	target_fsid_t f_fsid;
+ 	uint32_t f_namelen;
+ 	uint32_t f_frsize;
++#ifdef HAVE_STATFS_FLAGS
++	uint32_t f_flags;
++	uint32_t f_spare[4];
++#else
+ 	uint32_t f_spare[5];
++#endif
+ };
+ 
+ struct target_statfs64 {
+@@ -2341,7 +2389,12 @@ struct target_statfs64 {
+ 	target_fsid_t f_fsid;
+         uint32_t f_namelen;
+ 	uint32_t f_frsize;
++#ifdef HAVE_STATFS_FLAGS
++	uint32_t f_flags;
++	uint32_t f_spare[4];
++#else
+ 	uint32_t f_spare[5];
++#endif
+ };
+ #endif
+ 
diff --git a/pkgs/applications/virtualization/xen/4.5.nix b/pkgs/applications/virtualization/xen/4.5.nix
index ec3fe9ccf221..22799a7af8e7 100644
--- a/pkgs/applications/virtualization/xen/4.5.nix
+++ b/pkgs/applications/virtualization/xen/4.5.nix
@@ -248,4 +248,10 @@ callPackage (import ./generic.nix (rec {
       -i tools/libxl/libxl_device.c
   '';
 
+  passthru = {
+    qemu-system-i386 = if withInternalQemu
+      then "lib/xen/bin/qemu-system-i386"
+      else throw "this xen has no qemu builtin";
+  };
+
 })) ({ ocamlPackages = ocamlPackages_4_02; } // args)
diff --git a/pkgs/applications/virtualization/xen/4.8.nix b/pkgs/applications/virtualization/xen/4.8.nix
index 6eedca18960b..b1fcf36a46c1 100644
--- a/pkgs/applications/virtualization/xen/4.8.nix
+++ b/pkgs/applications/virtualization/xen/4.8.nix
@@ -49,15 +49,9 @@ callPackage (import ./generic.nix (rec {
       src = fetchgit {
         url = https://xenbits.xen.org/git-http/qemu-xen.git;
         rev = "refs/tags/qemu-xen-${version}";
-        sha256 = "1v19pp86kcgwvsbkrdrn4rlaj02i4054avw8k70w1m0rnwgcsdbs";
+        sha256 = "1l4sygd8p0mc13bskr4r1m31qh1kr58h195qn1s52869s58jyhvm";
       };
       buildInputs = qemuDeps;
-      patches = [
-        (xsaPatch {
-          name = "216-qemuu";
-          sha256 = "06w2iw1r5gip2bpbg19cziws965h9in0f6np74cr31f76yy30yxn";
-        })
-      ];
       meta.description = "Xen's fork of upstream Qemu";
     };
   } // optionalAttrs withInternalTraditionalQemu {
@@ -176,4 +170,10 @@ callPackage (import ./generic.nix (rec {
       -i tools/libxl/libxl_device.c
   '';
 
+  passthru = {
+    qemu-system-i386 = if withInternalQemu
+      then "lib/xen/bin/qemu-system-i386"
+      else throw "this xen has no qemu builtin";
+  };
+
 })) args
diff --git a/pkgs/applications/virtualization/xen/packages.nix b/pkgs/applications/virtualization/xen/packages.nix
index 8f5262acb024..4b5f15c8ff42 100644
--- a/pkgs/applications/virtualization/xen/packages.nix
+++ b/pkgs/applications/virtualization/xen/packages.nix
@@ -58,10 +58,6 @@ rec {
   };
 
   xen_4_8-vanilla = callPackage ./4.8.nix {
-    # At the very least included seabios and etherboot need gcc49,
-    # so we have to build all of it with gcc49.
-    stdenv = overrideCC stdenv gcc49;
-
     meta = {
       description = "vanilla";
       longDescription = ''
diff --git a/pkgs/build-support/bintools-wrapper/default.nix b/pkgs/build-support/bintools-wrapper/default.nix
index bb0e6b82aa5d..48fd8665cb47 100644
--- a/pkgs/build-support/bintools-wrapper/default.nix
+++ b/pkgs/build-support/bintools-wrapper/default.nix
@@ -51,6 +51,7 @@ let
   # shell glob that ought to match it.
   dynamicLinker =
     /**/ if libc == null then null
+    else if targetPlatform.libc == "musl"             then "${libc_lib}/lib/ld-musl-*"
     else if targetPlatform.system == "i686-linux"     then "${libc_lib}/lib/ld-linux.so.2"
     else if targetPlatform.system == "x86_64-linux"   then "${libc_lib}/lib/ld-linux-x86-64.so.2"
     # ARM with a wildcard, which can be "" or "-armhf".
diff --git a/pkgs/build-support/build-bazel-package/default.nix b/pkgs/build-support/build-bazel-package/default.nix
new file mode 100644
index 000000000000..349a7e5aa333
--- /dev/null
+++ b/pkgs/build-support/build-bazel-package/default.nix
@@ -0,0 +1,78 @@
+{ stdenv, bazel }:
+
+args@{ name, bazelFlags ? [], bazelTarget, buildAttrs, fetchAttrs, ... }:
+
+let
+  fArgs = removeAttrs args [ "buildAttrs" "fetchAttrs" ];
+  fBuildAttrs = fArgs // buildAttrs;
+  fFetchAttrs = fArgs // removeAttrs fetchAttrs [ "sha256" ];
+
+in stdenv.mkDerivation (fBuildAttrs // {
+  inherit name bazelFlags bazelTarget;
+
+  deps = stdenv.mkDerivation (fFetchAttrs // {
+    name = "${name}-deps";
+    inherit bazelFlags bazelTarget;
+
+    nativeBuildInputs = fFetchAttrs.nativeBuildInputs or [] ++ [ bazel ];
+
+    preHook = fFetchAttrs.preHook or "" + ''
+      export bazelOut="$NIX_BUILD_TOP/output"
+      export HOME="$NIX_BUILD_TOP"
+    '';
+
+    buildPhase = fFetchAttrs.buildPhase or ''
+      runHook preBuild
+
+      bazel --output_base="$bazelOut" fetch $bazelFlags $bazelTarget
+
+      runHook postBuild
+    '';
+
+    installPhase = fFetchAttrs.installPhase or ''
+      runHook preInstall
+
+      # Patching markers to make them deterministic
+      for i in $bazelOut/external/\@*.marker; do
+        sed -i 's, -\?[0-9][0-9]*$, 1,' "$i"
+      done
+      # Patching symlinks to remove build directory reference
+      find $bazelOut/external -type l | while read symlink; do
+        ln -sf $(readlink "$symlink" | sed "s,$NIX_BUILD_TOP,NIX_BUILD_TOP,") "$symlink"
+      done
+
+      cp -r $bazelOut/external $out
+
+      runHook postInstall
+    '';
+
+    dontFixup = true;
+    outputHashMode = "recursive";
+    outputHashAlgo = "sha256";
+    outputHash = fetchAttrs.sha256;
+  });
+
+  nativeBuildInputs = fBuildAttrs.nativeBuildInputs or [] ++ [ (bazel.override { enableNixHacks = true; }) ];
+
+  preHook = fBuildAttrs.preHook or "" + ''
+    export bazelOut="$NIX_BUILD_TOP/output"
+    export HOME="$NIX_BUILD_TOP"
+  '';
+
+  preConfigure = ''
+    mkdir -p $bazelOut/external
+    cp -r $deps/* $bazelOut/external
+    chmod -R +w $bazelOut
+    find $bazelOut -type l | while read symlink; do
+      ln -sf $(readlink "$symlink" | sed "s,NIX_BUILD_TOP,$NIX_BUILD_TOP,") "$symlink"
+    done
+  '' + fBuildAttrs.preConfigure or "";
+
+  buildPhase = fBuildAttrs.buildPhase or ''
+    runHook preBuild
+
+    bazel --output_base="$bazelOut" build -j $NIX_BUILD_CORES $bazelFlags $bazelTarget
+
+    runHook postBuild
+  '';
+})
diff --git a/pkgs/build-support/docker/default.nix b/pkgs/build-support/docker/default.nix
index 68b803f6e3cc..c40b096e2088 100644
--- a/pkgs/build-support/docker/default.nix
+++ b/pkgs/build-support/docker/default.nix
@@ -476,8 +476,6 @@ rec {
         cp ${layer}/* temp/
         chmod ug+w temp/*
 
-        echo "$(dirname ${storeDir})" >> layerFiles
-        echo '${storeDir}' >> layerFiles
         for dep in $(cat $layerClosure); do
           find $dep >> layerFiles
         done
diff --git a/pkgs/build-support/emacs/buffer.nix b/pkgs/build-support/emacs/buffer.nix
index 75e660d02143..550163ddd696 100644
--- a/pkgs/build-support/emacs/buffer.nix
+++ b/pkgs/build-support/emacs/buffer.nix
@@ -4,7 +4,8 @@
 { lib, writeText, inherit-local }:
 
 rec {
-  withPackages = pkgs: let
+  withPackages = pkgs': let
+      pkgs = builtins.filter (x: x != null) pkgs';
       extras = map (x: x.emacsBufferSetup pkgs) (builtins.filter (builtins.hasAttr "emacsBufferSetup") pkgs);
     in writeText "dir-locals.el" ''
       (require 'inherit-local "${inherit-local}/share/emacs/site-lisp/elpa/inherit-local-${inherit-local.version}/inherit-local.elc")
diff --git a/pkgs/build-support/fetchurl/default.nix b/pkgs/build-support/fetchurl/default.nix
index 3e47d4a4b683..0bf529caa75e 100644
--- a/pkgs/build-support/fetchurl/default.nix
+++ b/pkgs/build-support/fetchurl/default.nix
@@ -1,4 +1,4 @@
-{ stdenvNoCC, curl }: # Note that `curl' may be `null', in case of the native stdenvNoCC.
+{ lib, stdenvNoCC, curl }: # Note that `curl' may be `null', in case of the native stdenvNoCC.
 
 let
 
@@ -20,7 +20,7 @@ let
   # "gnu", etc.).
   sites = builtins.attrNames mirrors;
 
-  impureEnvVars = stdenvNoCC.lib.fetchers.proxyImpureEnvVars ++ [
+  impureEnvVars = lib.fetchers.proxyImpureEnvVars ++ [
     # This variable allows the user to pass additional options to curl
     "NIX_CURL_FLAGS"
 
@@ -89,22 +89,28 @@ in
 , passthru ? {}
 }:
 
-assert builtins.isList urls;
-assert (urls == []) != (url == "");
 assert sha512 != "" -> builtins.compareVersions "1.11" builtins.nixVersion <= 0;
 
-
 let
 
-  hasHash = showURLs || (outputHash != "" && outputHashAlgo != "")
-    || sha1 != "" || sha256 != "" || sha512 != "";
-  urls_ = if urls != [] then urls else [url];
+  urls_ =
+    if urls != [] && url == "" then
+      (if lib.isList urls then urls
+       else throw "`urls` is not a list")
+    else if urls == [] && url != "" then [url]
+    else throw "fetchurl requires either `url` or `urls` to be set";
+
+  hash_ =
+    if md5 != "" then throw "fetchurl does not support md5 anymore, please use sha256 or sha512"
+    else if (outputHash != "" && outputHashAlgo != "") then { inherit outputHashAlgo outputHash; }
+    else if sha512 != "" then { outputHashAlgo = "sha512"; outputHash = sha512; }
+    else if sha256 != "" then { outputHashAlgo = "sha256"; outputHash = sha256; }
+    else if sha1   != "" then { outputHashAlgo = "sha1";   outputHash = sha1; }
+    else throw "fetchurl requires a hash for fixed-output derivation: ${lib.concatStringsSep ", " urls_}";
 
 in
 
-if md5 != "" then throw "fetchurl does not support md5 anymore, please use sha256 or sha512"
-else if (!hasHash) then throw "Specify hash for fetchurl fixed-output derivation: ${stdenvNoCC.lib.concatStringsSep ", " urls_}"
-else stdenvNoCC.mkDerivation {
+stdenvNoCC.mkDerivation {
   name =
     if showURLs then "urls"
     else if name != "" then name
@@ -121,10 +127,7 @@ else stdenvNoCC.mkDerivation {
   preferHashedMirrors = true;
 
   # New-style output content requirements.
-  outputHashAlgo = if outputHashAlgo != "" then outputHashAlgo else
-      if sha512 != "" then "sha512" else if sha256 != "" then "sha256" else "sha1";
-  outputHash = if outputHash != "" then outputHash else
-      if sha512 != "" then sha512 else if sha256 != "" then sha256 else sha1;
+  inherit (hash_) outputHashAlgo outputHash;
 
   outputHashMode = if (recursiveHash || executable) then "recursive" else "flat";
 
diff --git a/pkgs/build-support/kernel/modules-closure.nix b/pkgs/build-support/kernel/modules-closure.nix
index 9940e611124c..a527770adcd7 100644
--- a/pkgs/build-support/kernel/modules-closure.nix
+++ b/pkgs/build-support/kernel/modules-closure.nix
@@ -3,13 +3,13 @@
 # the modules identified by `rootModules', plus their dependencies.
 # Also generate an appropriate modules.dep.
 
-{ stdenvNoCC, kernel, nukeReferences, rootModules
+{ stdenvNoCC, kernel, firmware, nukeReferences, rootModules
 , kmod, allowMissing ? false }:
 
 stdenvNoCC.mkDerivation {
   name = kernel.name + "-shrunk";
   builder = ./modules-closure.sh;
   buildInputs = [ nukeReferences kmod ];
-  inherit kernel rootModules allowMissing;
+  inherit kernel firmware rootModules allowMissing;
   allowedReferences = ["out"];
 }
diff --git a/pkgs/build-support/kernel/modules-closure.sh b/pkgs/build-support/kernel/modules-closure.sh
index 8a31c760da07..8287c1672d06 100644
--- a/pkgs/build-support/kernel/modules-closure.sh
+++ b/pkgs/build-support/kernel/modules-closure.sh
@@ -33,4 +33,13 @@ for module in $closure; do
     echo $target >> $out/insmod-list
 done
 
+mkdir -p $out/lib/firmware
+for module in $closure; do
+    for i in $(modinfo -F firmware $module); do
+        mkdir -p "$out/lib/firmware/$(dirname "$i")"
+        echo "firmware for $module: $i"
+        cp "$firmware/lib/firmware/$i" "$out/lib/firmware/$i" 2>/dev/null || if test -z "$allowMissing"; then exit 1; fi
+    done
+done
+
 depmod -b $out -a $version
diff --git a/pkgs/build-support/release/debian-build.nix b/pkgs/build-support/release/debian-build.nix
index f4bc3e73056d..354d929c9b65 100644
--- a/pkgs/build-support/release/debian-build.nix
+++ b/pkgs/build-support/release/debian-build.nix
@@ -78,10 +78,10 @@ vmTools.runInLinuxImage (stdenv.mkDerivation (
         header "Generated DEB package: $i"
         dpkg-deb --info "$i"
         pkgName=$(dpkg-deb -W "$i" | awk '{print $1}')
-        dpkg -i "$i"
         echo "file deb $i" >> $out/nix-support/hydra-build-products
         stopNest
       done
+      dpkg -i $out/debs/*.deb
 
       for i in $extraDebs; do
         echo "file deb-extra $(ls $i/debs/*.deb | sort | head -1)" >> $out/nix-support/hydra-build-products
diff --git a/pkgs/build-support/rust/build-rust-crate.nix b/pkgs/build-support/rust/build-rust-crate.nix
index e36fab36bf97..8a9a07fd7a8f 100644
--- a/pkgs/build-support/rust/build-rust-crate.nix
+++ b/pkgs/build-support/rust/build-rust-crate.nix
@@ -6,44 +6,16 @@
 
 { lib, buildPlatform, stdenv, defaultCrateOverrides, fetchCrate, ncurses, rustc  }:
 
-let buildCrate = { crateName, crateVersion, crateAuthors, buildDependencies,
-                   dependencies, completeDeps, completeBuildDeps,
-                   crateFeatures, libName, build, release, libPath,
-                   crateType, metadata, crateBin, finalBins,
-                   verbose, colors }:
-
-      let depsDir = lib.concatStringsSep " " dependencies;
-          completeDepsDir = lib.concatStringsSep " " completeDeps;
-          completeBuildDepsDir = lib.concatStringsSep " " completeBuildDeps;
-          makeDeps = dependencies:
-            (lib.concatMapStringsSep " " (dep:
-              let extern = lib.strings.replaceStrings ["-"] ["_"] dep.libName; in
-              (if dep.crateType == "lib" then
-                 " --extern ${extern}=${dep.out}/lib/lib${extern}-${dep.metadata}.rlib"
-              else
-                 " --extern ${extern}=${dep.out}/lib/lib${extern}-${dep.metadata}${buildPlatform.extensions.sharedLibrary}")
-            ) dependencies);
-          deps = makeDeps dependencies;
-          buildDeps = makeDeps buildDependencies;
-          optLevel = if release then 3 else 0;
-          rustcOpts = (if release then "-C opt-level=3" else "-C debuginfo=2");
-          rustcMeta = "-C metadata=${metadata} -C extra-filename=-${metadata}";
-          version_ = lib.splitString "-" crateVersion;
-          versionPre = if lib.tail version_ == [] then "" else builtins.elemAt version_ 1;
-          version = lib.splitString "." (lib.head version_);
-          authors = lib.concatStringsSep ":" crateAuthors;
-      in ''
-      norm=""
-      bold=""
-      green=""
-      boldgreen=""
-      if [[ "${colors}" -eq "always" ]]; then
-        norm="$(printf '\033[0m')" #returns to "normal"
-        bold="$(printf '\033[0;1m')" #set bold
-        green="$(printf '\033[0;32m')" #set green
-        boldgreen="$(printf '\033[0;1;32m')" #set bold, and set green.
-      fi
-
+let makeDeps = dependencies:
+      (lib.concatMapStringsSep " " (dep:
+        let extern = lib.strings.replaceStrings ["-"] ["_"] dep.libName; in
+        (if dep.crateType == "lib" then
+           " --extern ${extern}=${dep.out}/lib/lib${extern}-${dep.metadata}.rlib"
+         else
+           " --extern ${extern}=${dep.out}/lib/lib${extern}-${dep.metadata}${buildPlatform.extensions.sharedLibrary}")
+      ) dependencies);
+
+    echo_build_heading = colors: ''
       echo_build_heading() {
        start=""
        end=""
@@ -57,7 +29,8 @@ let buildCrate = { crateName, crateVersion, crateAuthors, buildDependencies,
          echo "$start""Building $1 ($2)""$end"
        fi
       }
-
+    '';
+    noisily = colors: verbose: ''
       noisily() {
         start=""
         end=""
@@ -71,18 +44,29 @@ let buildCrate = { crateName, crateVersion, crateAuthors, buildDependencies,
 	''}
 	$@
       }
+    '';
 
+    configureCrate =
+      { crateName, crateVersion, crateAuthors, build, libName, crateFeatures, colors, libPath, release, buildDependencies, completeDeps, completeBuildDeps, verbose, dependencies }:
+      let version_ = lib.splitString "-" crateVersion;
+          versionPre = if lib.tail version_ == [] then "" else builtins.elemAt version_ 1;
+          version = lib.splitString "." (lib.head version_);
+          rustcOpts = (if release then "-C opt-level=3" else "-C debuginfo=2");
+          buildDeps = makeDeps buildDependencies;
+          authors = lib.concatStringsSep ":" crateAuthors;
+          optLevel = if release then 3 else 0;
+          completeDepsDir = lib.concatStringsSep " " completeDeps;
+          completeBuildDepsDir = lib.concatStringsSep " " completeBuildDeps;
+      in ''
+      runHook preConfigure
+      ${echo_build_heading colors}
+      ${noisily colors verbose}
       symlink_dependency() {
-      # $1 is the nix-store path of a dependency
+        # $1 is the nix-store path of a dependency
+        # $2 is the target path
         i=$1
-	dest=target/deps
-	if [ ! -z $2 ]; then
-           if [ "$2" = "--buildDep" ]; then
-             dest=target/buildDeps
-           fi
-	fi
-        ln -s -f $i/lib/*.rlib $dest #*/
-        ln -s -f $i/lib/*.so $i/lib/*.dylib $dest #*/
+        ln -s -f $i/lib/*.rlib $2 #*/
+        ln -s -f $i/lib/*.so $i/lib/*.dylib $2 #*/
         if [ -e "$i/lib/link" ]; then
             cat $i/lib/link >> target/link
             cat $i/lib/link >> target/link.final
@@ -92,48 +76,15 @@ let buildCrate = { crateName, crateVersion, crateAuthors, buildDependencies,
         fi
       }
 
-      build_lib() {
-         lib_src=$1
-         echo_build_heading $lib_src ${libName}
-
-         noisily rustc --crate-name $CRATE_NAME $lib_src --crate-type ${crateType} \
-           ${rustcOpts} ${rustcMeta} ${crateFeatures} --out-dir target/lib \
-           --emit=dep-info,link -L dependency=target/deps ${deps} --cap-lints allow \
-           $BUILD_OUT_DIR $EXTRA_BUILD $EXTRA_FEATURES --color ${colors}
-
-         EXTRA_LIB=" --extern $CRATE_NAME=target/lib/lib$CRATE_NAME-${metadata}.rlib"
-         if [ -e target/deps/lib$CRATE_NAME-${metadata}${buildPlatform.extensions.sharedLibrary} ]; then
-            EXTRA_LIB="$EXTRA_LIB --extern $CRATE_NAME=target/lib/lib$CRATE_NAME-${metadata}${buildPlatform.extensions.sharedLibrary}"
-         fi
-      }
-
-      build_bin() {
-        crate_name=$1
-        crate_name_=$(echo $crate_name | sed -e "s/-/_/g")
-	main_file=""
-	if [[ ! -z $2 ]]; then
-          main_file=$2
-	fi
-	echo_build_heading $@
-	noisily rustc --crate-name $crate_name_ $main_file --crate-type bin ${rustcOpts}\
-          ${crateFeatures} --out-dir target/bin --emit=dep-info,link -L dependency=target/deps \
-          $LINK ${deps}$EXTRA_LIB --cap-lints allow \
-          $BUILD_OUT_DIR $EXTRA_BUILD $EXTRA_FEATURES --color ${colors}
-        if [ "$crate_name_" -ne "$crate_name" ]; then
-          mv target/bin/$crate_name_ target/bin/$crate_name
-        fi
-      }
-
-      runHook preBuild
       mkdir -p target/{deps,lib,build,buildDeps}
       chmod uga+w target -R
       for i in ${completeDepsDir}; do
-        symlink_dependency $i
+        symlink_dependency $i target/deps
       done
       for i in ${completeBuildDepsDir}; do
-         symlink_dependency $i --buildDep
+         symlink_dependency $i target/buildDeps
       done
-      if [ -e target/link ]; then
+      if [[ -e target/link ]]; then
         sort -u target/link > target/link.sorted
         mv target/link.sorted target/link
         sort -u target/link.final > target/link.final.sorted
@@ -145,10 +96,16 @@ let buildCrate = { crateName, crateVersion, crateAuthors, buildDependencies,
       export CARGO_PKG_NAME=${crateName}
       export CARGO_PKG_VERSION=${crateVersion}
       export CARGO_PKG_AUTHORS="${authors}"
+
       export CARGO_CFG_TARGET_ARCH=${buildPlatform.parsed.cpu.name}
       export CARGO_CFG_TARGET_OS=${buildPlatform.parsed.kernel.name}
-
+      export CARGO_CFG_TARGET_FAMILY="unix"
+      export CARGO_CFG_UNIX=1
       export CARGO_CFG_TARGET_ENV="gnu"
+      export CARGO_CFG_TARGET_ENDIAN=${if buildPlatform.parsed.cpu.significantByte.name == "littleEndian" then "little" else "big"}
+      export CARGO_CFG_TARGET_POINTER_WIDTH=${toString buildPlatform.parsed.cpu.bits}
+      export CARGO_CFG_TARGET_VENDOR=${buildPlatform.parsed.vendor.name}
+
       export CARGO_MANIFEST_DIR="."
       export DEBUG="${toString (!release)}"
       export OPT_LEVEL="${toString optLevel}"
@@ -159,7 +116,7 @@ let buildCrate = { crateName, crateVersion, crateAuthors, buildDependencies,
       export CARGO_PKG_VERSION_MAJOR=${builtins.elemAt version 0}
       export CARGO_PKG_VERSION_MINOR=${builtins.elemAt version 1}
       export CARGO_PKG_VERSION_PATCH=${builtins.elemAt version 2}
-      if [ -n "${versionPre}" ]; then
+      if [[ -n "${versionPre}" ]]; then
         export CARGO_PKG_VERSION_PRE="${versionPre}"
       fi
 
@@ -180,8 +137,8 @@ let buildCrate = { crateName, crateVersion, crateAuthors, buildDependencies,
            EXTRA_BUILD_FLAGS="$EXTRA_BUILD_FLAGS $(cat target/link.build)"
          fi
          noisily rustc --crate-name build_script_build $BUILD --crate-type bin ${rustcOpts} \
-          ${crateFeatures} --out-dir target/build/${crateName} --emit=dep-info,link \
-          -L dependency=target/buildDeps ${buildDeps} --cap-lints allow $EXTRA_BUILD_FLAGS --color ${colors}
+           ${crateFeatures} --out-dir target/build/${crateName} --emit=dep-info,link \
+           -L dependency=target/buildDeps ${buildDeps} --cap-lints allow $EXTRA_BUILD_FLAGS --color ${colors}
 
          mkdir -p target/build/${crateName}.out
          export RUST_BACKTRACE=1
@@ -198,33 +155,104 @@ let buildCrate = { crateName, crateVersion, crateAuthors, buildDependencies,
            | sed -e "s/cargo:\([^=]*\)=\(.*\)/export DEP_$(echo $CRATENAME)_\U\1\E=\2/" > target/env
 
          set -e
-         if [ -n "$(ls target/build/${crateName}.out)" ]; then
+         if [[ -n "$(ls target/build/${crateName}.out)" ]]; then
 
-            if [ -e "${libPath}" ] ; then
+            if [[ -e "${libPath}" ]]; then
                cp -r target/build/${crateName}.out/* $(dirname ${libPath}) #*/
             else
                cp -r target/build/${crateName}.out/* src #*/
             fi
          fi
       fi
+      runHook postConfigure
+    '';
+
+    buildCrate = { crateName, crateVersion, crateAuthors,
+                   dependencies, completeDeps, completeBuildDeps,
+                   crateFeatures, libName, build, release, libPath,
+                   crateType, metadata, crateBin, finalBins,
+                   extraRustcOpts,
+                   verbose, colors }:
+
+      let depsDir = lib.concatStringsSep " " dependencies;
+          completeDepsDir = lib.concatStringsSep " " completeDeps;
+          completeBuildDepsDir = lib.concatStringsSep " " completeBuildDeps;
+          deps = makeDeps dependencies;
+          optLevel = if release then 3 else 0;
+          rustcOpts =
+            lib.lists.foldl' (opts: opt: opts + " " + opt)
+              (if release then "-C opt-level=3" else "-C debuginfo=2")
+              extraRustcOpts;
+          rustcMeta = "-C metadata=${metadata} -C extra-filename=-${metadata}";
+          version_ = lib.splitString "-" crateVersion;
+          versionPre = if lib.tail version_ == [] then "" else builtins.elemAt version_ 1;
+          version = lib.splitString "." (lib.head version_);
+          authors = lib.concatStringsSep ":" crateAuthors;
+      in ''
+      runHook preBuild
+      norm=""
+      bold=""
+      green=""
+      boldgreen=""
+      if [[ "${colors}" -eq "always" ]]; then
+        norm="$(printf '\033[0m')" #returns to "normal"
+        bold="$(printf '\033[0;1m')" #set bold
+        green="$(printf '\033[0;32m')" #set green
+        boldgreen="$(printf '\033[0;1;32m')" #set bold, and set green.
+      fi
+      ${echo_build_heading colors}
+      ${noisily colors verbose}
+
+      build_lib() {
+         lib_src=$1
+         echo_build_heading $lib_src ${libName}
+
+         noisily rustc --crate-name $CRATE_NAME $lib_src --crate-type ${crateType} \
+           ${rustcOpts} ${rustcMeta} ${crateFeatures} --out-dir target/lib \
+           --emit=dep-info,link -L dependency=target/deps ${deps} --cap-lints allow \
+           $BUILD_OUT_DIR $EXTRA_BUILD $EXTRA_FEATURES --color ${colors}
+
+         EXTRA_LIB=" --extern $CRATE_NAME=target/lib/lib$CRATE_NAME-${metadata}.rlib"
+         if [ -e target/deps/lib$CRATE_NAME-${metadata}${buildPlatform.extensions.sharedLibrary} ]; then
+            EXTRA_LIB="$EXTRA_LIB --extern $CRATE_NAME=target/lib/lib$CRATE_NAME-${metadata}${buildPlatform.extensions.sharedLibrary}"
+         fi
+      }
+
+      build_bin() {
+        crate_name=$1
+        crate_name_=$(echo $crate_name | sed -e "s/-/_/g")
+	main_file=""
+	if [[ ! -z $2 ]]; then
+          main_file=$2
+	fi
+	echo_build_heading $@
+	noisily rustc --crate-name $crate_name_ $main_file --crate-type bin ${rustcOpts}\
+          ${crateFeatures} --out-dir target/bin --emit=dep-info,link -L dependency=target/deps \
+          $LINK ${deps}$EXTRA_LIB --cap-lints allow \
+          $BUILD_OUT_DIR $EXTRA_BUILD $EXTRA_FEATURES --color ${colors}
+        if [ "$crate_name_" -ne "$crate_name" ]; then
+          mv target/bin/$crate_name_ target/bin/$crate_name
+        fi
+      }
+
 
       EXTRA_LIB=""
       CRATE_NAME=$(echo ${libName} | sed -e "s/-/_/g")
 
-      if [ -e target/link_ ]; then
+      if [[ -e target/link_ ]]; then
         EXTRA_BUILD="$(cat target/link_) $EXTRA_BUILD"
       fi
 
-      if [ -e "${libPath}" ] ; then
+      if [[ -e "${libPath}" ]]; then
          build_lib ${libPath}
-      elif [ -e src/lib.rs ] ; then
+      elif [[ -e src/lib.rs ]]; then
          build_lib src/lib.rs
-      elif [ -e src/${libName}.rs ] ; then
+      elif [[ -e src/${libName}.rs ]]; then
          build_lib src/${libName}.rs
       fi
 
       echo "$EXTRA_LINK_SEARCH" | while read i; do
-         if [ ! -z "$i" ]; then
+         if [[ ! -z "$i" ]]; then
            for lib in $i; do
              echo "-L $lib" >> target/link
              L=$(echo $lib | sed -e "s#$(pwd)/target/build#$out/lib#")
@@ -233,7 +261,7 @@ let buildCrate = { crateName, crateVersion, crateAuthors, buildDependencies,
          fi
       done
       echo "$EXTRA_LINK" | while read i; do
-         if [ ! -z "$i" ]; then
+         if [[ ! -z "$i" ]]; then
            for lib in $i; do
              echo "-l $lib" >> target/link
              echo "-l $lib" >> target/link.final
@@ -241,7 +269,7 @@ let buildCrate = { crateName, crateVersion, crateAuthors, buildDependencies,
          fi
       done
 
-      if [ -e target/link ]; then
+      if [[ -e target/link ]]; then
          sort -u target/link.final > target/link.final.sorted
          mv target/link.final.sorted target/link.final
          sort -u target/link > target/link.sorted
@@ -253,7 +281,7 @@ let buildCrate = { crateName, crateVersion, crateAuthors, buildDependencies,
 
       mkdir -p target/bin
       echo "${crateBin}" | sed -n 1'p' | tr ',' '\n' | while read BIN; do
-         if [ ! -z "$BIN" ]; then
+         if [[ ! -z "$BIN" ]]; then
            build_bin $BIN
          fi
       done
@@ -267,36 +295,49 @@ let buildCrate = { crateName, crateVersion, crateAuthors, buildDependencies,
       ''}
       # Remove object files to avoid "wrong ELF type"
       find target -type f -name "*.o" -print0 | xargs -0 rm -f
+    '' + finalBins + ''
       runHook postBuild
-    '' + finalBins;
+    '';
 
-    installCrate = crateName: ''
+    installCrate = crateName: metadata: ''
+      runHook preInstall
       mkdir -p $out
-      if [ -s target/env ]; then
+      if [[ -s target/env ]]; then
         cp target/env $out/env
       fi
-      if [ -s target/link.final ]; then
+      if [[ -s target/link.final ]]; then
         mkdir -p $out/lib
         cp target/link.final $out/lib/link
       fi
-      if [ "$(ls -A target/lib)" ]; then
+      if [[ "$(ls -A target/lib)" ]]; then
         mkdir -p $out/lib
         cp target/lib/* $out/lib #*/
+        for lib in $out/lib/*.so $out/lib/*.dylib; do #*/
+          ln -s $lib $(echo $lib | sed -e "s/-${metadata}//")
+        done
       fi
-      if [ "$(ls -A target/build)" ]; then # */
+      if [[ "$(ls -A target/build)" ]]; then # */
         mkdir -p $out/lib
         cp -r target/build/* $out/lib # */
       fi
-      if [ "$(ls -A target/bin)" ]; then
+      if [[ "$(ls -A target/bin)" ]]; then
         mkdir -p $out/bin
         cp -P target/bin/* $out/bin # */
       fi
+      runHook postInstall
     '';
 in
 
-crate_: lib.makeOverridable ({ rust, release, verbose, features, buildInputs, crateOverrides }:
+crate_: lib.makeOverridable ({ rust, release, verbose, features, buildInputs, crateOverrides,
+  dependencies, buildDependencies,
+  extraRustcOpts,
+  preUnpack, postUnpack, prePatch, patches, postPatch,
+  preConfigure, postConfigure, preBuild, postBuild, preInstall, postInstall }:
 
 let crate = crate_ // (lib.attrByPath [ crate_.crateName ] (attr: {}) crateOverrides crate_);
+    release_ = release;
+    dependencies_ = dependencies;
+    buildDependencies_ = buildDependencies;
     processedAttrs = [
       "src" "buildInputs" "crateBin" "crateLib" "libName" "libPath"
       "buildDependencies" "dependencies" "features"
@@ -308,6 +349,7 @@ in
 stdenv.mkDerivation (rec {
 
     inherit (crate) crateName;
+    inherit preUnpack postUnpack prePatch patches postPatch preConfigure postConfigure preBuild postBuild preInstall postInstall;
 
     src = if lib.hasAttr "src" crate then
         crate.src
@@ -318,12 +360,12 @@ stdenv.mkDerivation (rec {
     dependencies =
       builtins.map
         (dep: dep.override { rust = rust; release = release; verbose = verbose; crateOverrides = crateOverrides; })
-        (crate.dependencies or []);
+        dependencies_;
 
     buildDependencies =
       builtins.map
         (dep: dep.override { rust = rust; release = release; verbose = verbose; crateOverrides = crateOverrides; })
-        (crate.buildDependencies or []);
+        buildDependencies_;
 
     completeDeps = lib.lists.unique (dependencies ++ lib.lists.concatMap (dep: dep.completeDeps) dependencies);
     completeBuildDeps = lib.lists.unique (
@@ -338,7 +380,8 @@ stdenv.mkDerivation (rec {
     libName = if crate ? libName then crate.libName else crate.crateName;
     libPath = if crate ? libPath then crate.libPath else "";
 
-    metadata = builtins.substring 0 10 (builtins.hashString "sha256" (crateName + "-" + crateVersion));
+    depsMetadata = builtins.foldl' (str: dep: str + dep.metadata) "" (dependencies ++ buildDependencies);
+    metadata = builtins.substring 0 10 (builtins.hashString "sha256" (crateName + "-" + crateVersion + "___" + toString crateFeatures + "___" + depsMetadata ));
 
     crateBin = if crate ? crateBin then
        builtins.foldl' (bins: bin:
@@ -369,20 +412,42 @@ stdenv.mkDerivation (rec {
     crateAuthors = if crate ? authors && lib.isList crate.authors then crate.authors else [];
     crateType =
       if lib.attrByPath ["procMacro"] false crate then "proc-macro" else
-      if lib.attrByPath ["plugin"] false crate then "dylib" else "lib";
+      if lib.attrByPath ["plugin"] false crate then "dylib" else
+      if crate ? type then crate.type else "lib";
     colors = lib.attrByPath [ "colors" ] "always" crate;
-    buildPhase = buildCrate {
+    configurePhase = configureCrate {
       inherit crateName dependencies buildDependencies completeDeps completeBuildDeps
+              crateFeatures libName build release libPath crateVersion
+              crateAuthors verbose colors;
+    };
+    extraRustcOpts = if crate ? extraRustcOpts then crate.extraRustcOpts else [];
+    buildPhase = buildCrate {
+      inherit crateName dependencies completeDeps completeBuildDeps
               crateFeatures libName build release libPath crateType crateVersion
-              crateAuthors metadata crateBin finalBins verbose colors;
+              crateAuthors metadata crateBin finalBins verbose colors extraRustcOpts;
     };
-    installPhase = installCrate crateName;
+    installPhase = installCrate crateName metadata;
 
-} // extraDerivationAttrs)) {
+} // extraDerivationAttrs
+)) {
   rust = rustc;
-  release = true;
-  verbose = true;
+  release = crate_.release or true;
+  verbose = crate_.verbose or true;
+  extraRustcOpts = [];
   features = [];
   buildInputs = [];
   crateOverrides = defaultCrateOverrides;
+  preUnpack = crate_.preUnpack or "";
+  postUnpack = crate_.postUnpack or "";
+  prePatch = crate_.prePatch or "";
+  patches = crate_.patches or [];
+  postPatch = crate_.postPatch or "";
+  preConfigure = crate_.preConfigure or "";
+  postConfigure = crate_.postConfigure or "";
+  preBuild = crate_.preBuild or "";
+  postBuild = crate_.postBuild or "";
+  preInstall = crate_.preInstall or "";
+  postInstall = crate_.postInstall or "";
+  dependencies = crate_.dependencies or [];
+  buildDependencies = crate_.buildDependencies or [];
 }
diff --git a/pkgs/build-support/rust/carnix.nix b/pkgs/build-support/rust/carnix.nix
index 8b0af499c8f1..ebb46b0f5921 100644
--- a/pkgs/build-support/rust/carnix.nix
+++ b/pkgs/build-support/rust/carnix.nix
@@ -1,4 +1,4 @@
-# Generated by carnix 0.6.5: carnix -o carnix.nix Cargo.lock --src ./.
+# Generated by carnix 0.6.5: carnix -o carnix.nix Cargo.lock
 { lib, buildPlatform, buildRustCrate, fetchgit }:
 let kernel = buildPlatform.parsed.kernel.name;
     abi = buildPlatform.parsed.abi.name;
@@ -18,7 +18,7 @@ let kernel = buildPlatform.parsed.kernel.name;
     ) [] (builtins.attrNames feat);
 in
 rec {
-  carnix = f: carnix_0_6_5 { features = carnix_0_6_5_features { carnix_0_6_5 = f; }; };
+  carnix = f: carnix_0_6_6 { features = carnix_0_6_6_features { carnix_0_6_6 = f; }; };
   aho_corasick_0_6_3_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate {
     crateName = "aho-corasick";
     version = "0.6.3";
@@ -71,11 +71,11 @@ rec {
     sha256 = "0p4b3nr0s5nda2qmm7xdhnvh4lkqk3xd8l9ffmwbvqw137vx7mj1";
     inherit dependencies buildDependencies features;
   };
-  carnix_0_6_5_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate {
+  carnix_0_6_6_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate {
     crateName = "carnix";
-    version = "0.6.5";
+    version = "0.6.6";
     authors = [ "pe@pijul.org <pe@pijul.org>" ];
-    sha256 = "0r952s5az5mhw7z2r421i5lr0w5h436hah61md2bdb3204c2pl9c";
+    sha256 = "1ai2r52j6vlrclhb7cvifx3lsg9naiy3jpsrbi3mmfmr6zbi7rdw";
     inherit dependencies buildDependencies features;
   };
   cc_1_0_3_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate {
@@ -623,11 +623,11 @@ rec {
       (f.bitflags_1_0_1.default or false) ||
       (bitflags_1_0_1.default or false);
   }) [];
-  carnix_0_6_5 = { features?(carnix_0_6_5_features {}) }: carnix_0_6_5_ {
+  carnix_0_6_6 = { features?(carnix_0_6_6_features {}) }: carnix_0_6_6_ {
     dependencies = mapFeatures features ([ clap_2_28_0 env_logger_0_5_3 error_chain_0_11_0 itertools_0_7_3 log_0_4_1 nom_3_2_1 regex_0_2_2 rusqlite_0_13_0 serde_1_0_21 serde_derive_1_0_21 serde_json_1_0_6 tempdir_0_3_5 toml_0_4_5 ]);
   };
-  carnix_0_6_5_features = f: updateFeatures f (rec {
-    carnix_0_6_5.default = (f.carnix_0_6_5.default or true);
+  carnix_0_6_6_features = f: updateFeatures f (rec {
+    carnix_0_6_6.default = (f.carnix_0_6_6.default or true);
     clap_2_28_0.default = true;
     env_logger_0_5_3.default = true;
     error_chain_0_11_0.default = true;
diff --git a/pkgs/build-support/rust/default-crate-overrides.nix b/pkgs/build-support/rust/default-crate-overrides.nix
index 658548135aaf..346fd0e7908f 100644
--- a/pkgs/build-support/rust/default-crate-overrides.nix
+++ b/pkgs/build-support/rust/default-crate-overrides.nix
@@ -1,5 +1,6 @@
 { stdenv, pkgconfig, curl, darwin, libiconv, libgit2, libssh2,
-  openssl, sqlite, zlib, dbus_libs, dbus_glib, gdk_pixbuf, cairo, python3, ... }:
+  openssl, sqlite, zlib, dbus_libs, dbus_glib, gdk_pixbuf, cairo, python3,
+  libsodium, postgresql, ... }:
 
 let
   inherit (darwin.apple_sdk.frameworks) CoreFoundation;
@@ -36,6 +37,7 @@ in
   openssl-sys = attrs: {
     buildInputs = [ pkgconfig openssl ];
   };
+
   dbus = attrs: {
     buildInputs = [ pkgconfig dbus_libs ];
   };
@@ -60,4 +62,11 @@ in
   xcb = attrs: {
     buildInputs = [ python3 ];
   };
+
+  thrussh-libsodium = attrs: {
+    buildInputs = [ pkgconfig libsodium ];
+  };
+  pq-sys = attr: {
+    buildInputs = [ pkgconfig postgresql ];
+  };
 }
diff --git a/pkgs/build-support/rust/default.nix b/pkgs/build-support/rust/default.nix
index 63d08e1d0311..83ef146de5f8 100644
--- a/pkgs/build-support/rust/default.nix
+++ b/pkgs/build-support/rust/default.nix
@@ -4,7 +4,7 @@ let
     inherit stdenv cacert git rust cargo-vendor;
   };
 in
-{ name, cargoSha256
+{ name, cargoSha256 ? null
 , src ? null
 , srcs ? null
 , sourceRoot ? null
@@ -13,15 +13,31 @@ in
 , cargoUpdateHook ? ""
 , cargoDepsHook ? ""
 , cargoBuildFlags ? []
+
+, cargoVendorDir ? null
 , ... } @ args:
 
+assert cargoVendorDir == null -> cargoSha256 != null;
+
 let
   lib = stdenv.lib;
 
-  cargoDeps = fetchcargo {
-    inherit name src srcs sourceRoot cargoUpdateHook;
-    sha256 = cargoSha256;
-  };
+  cargoDeps = if cargoVendorDir == null
+    then fetchcargo {
+        inherit name src srcs sourceRoot cargoUpdateHook;
+        sha256 = cargoSha256;
+      }
+    else null;
+
+  setupVendorDir = if cargoVendorDir == null
+    then ''
+      unpackFile "$cargoDeps"
+      cargoDepsCopy=$(stripHash $(basename $cargoDeps))
+      chmod -R +w "$cargoDepsCopy"
+    ''
+    else ''
+      cargoDepsCopy="$sourceRoot/${cargoVendorDir}"
+    '';
 
 in stdenv.mkDerivation (args // {
   inherit cargoDeps;
@@ -39,9 +55,7 @@ in stdenv.mkDerivation (args // {
   postUnpack = ''
     eval "$cargoDepsHook"
 
-    unpackFile "$cargoDeps"
-    cargoDepsCopy=$(stripHash $(basename $cargoDeps))
-    chmod -R +w "$cargoDepsCopy"
+    ${setupVendorDir}
 
     mkdir .cargo
     cat >.cargo/config <<-EOF
diff --git a/pkgs/build-support/setup-hooks/auto-patchelf.sh b/pkgs/build-support/setup-hooks/auto-patchelf.sh
new file mode 100644
index 000000000000..0f9d7603d48f
--- /dev/null
+++ b/pkgs/build-support/setup-hooks/auto-patchelf.sh
@@ -0,0 +1,174 @@
+declare -a autoPatchelfLibs
+
+gatherLibraries() {
+    autoPatchelfLibs+=("$1/lib")
+}
+
+addEnvHooks "$targetOffset" gatherLibraries
+
+isExecutable() {
+    [ "$(file -b -N --mime-type "$1")" = application/x-executable ]
+}
+
+findElfs() {
+    find "$1" -type f -exec "$SHELL" -c '
+        while [ -n "$1" ]; do
+            mimeType="$(file -b -N --mime-type "$1")"
+            if [ "$mimeType" = application/x-executable \
+              -o "$mimeType" = application/x-sharedlib ]; then
+                echo "$1"
+            fi
+            shift
+        done
+    ' -- {} +
+}
+
+# We cache dependencies so that we don't need to search through all of them on
+# every consecutive call to findDependency.
+declare -a cachedDependencies
+
+addToDepCache() {
+    local existing
+    for existing in "${cachedDependencies[@]}"; do
+        if [ "$existing" = "$1" ]; then return; fi
+    done
+    cachedDependencies+=("$1")
+}
+
+declare -gi depCacheInitialised=0
+declare -gi doneRecursiveSearch=0
+declare -g foundDependency
+
+getDepsFromSo() {
+    ldd "$1" 2> /dev/null | sed -n -e 's/[^=]*=> *\(.\+\) \+([^)]*)$/\1/p'
+}
+
+populateCacheWithRecursiveDeps() {
+    local so found foundso
+    for so in "${cachedDependencies[@]}"; do
+        for found in $(getDepsFromSo "$so"); do
+            local libdir="${found%/*}"
+            local base="${found##*/}"
+            local soname="${base%.so*}"
+            for foundso in "${found%/*}/$soname".so*; do
+                addToDepCache "$foundso"
+            done
+        done
+    done
+}
+
+getSoArch() {
+    objdump -f "$1" | sed -ne 's/^architecture: *\([^,]\+\).*/\1/p'
+}
+
+# NOTE: If you want to use this function outside of the autoPatchelf function,
+# keep in mind that the dependency cache is only valid inside the subshell
+# spawned by the autoPatchelf function, so invoking this directly will possibly
+# rebuild the dependency cache. See the autoPatchelf function below for more
+# information.
+findDependency() {
+    local filename="$1"
+    local arch="$2"
+    local lib dep
+
+    if [ $depCacheInitialised -eq 0 ]; then
+        for lib in "${autoPatchelfLibs[@]}"; do
+            for so in "$lib/"*.so*; do addToDepCache "$so"; done
+        done
+        depCacheInitialised=1
+    fi
+
+    for dep in "${cachedDependencies[@]}"; do
+        if [ "$filename" = "${dep##*/}" ]; then
+            if [ "$(getSoArch "$dep")" = "$arch" ]; then
+                foundDependency="$dep"
+                return 0
+            fi
+        fi
+    done
+
+    # Populate the dependency cache with recursive dependencies *only* if we
+    # didn't find the right dependency so far and afterwards run findDependency
+    # again, but this time with $doneRecursiveSearch set to 1 so that it won't
+    # recurse again (and thus infinitely).
+    if [ $doneRecursiveSearch -eq 0 ]; then
+        populateCacheWithRecursiveDeps
+        doneRecursiveSearch=1
+        findDependency "$filename" "$arch" || return 1
+        return 0
+    fi
+    return 1
+}
+
+autoPatchelfFile() {
+    local dep rpath="" toPatch="$1"
+
+    local interpreter="$(< "$NIX_CC/nix-support/dynamic-linker")"
+    if isExecutable "$toPatch"; then
+        patchelf --set-interpreter "$interpreter" "$toPatch"
+        if [ -n "$runtimeDependencies" ]; then
+            for dep in $runtimeDependencies; do
+                rpath="$rpath${rpath:+:}$dep/lib"
+            done
+        fi
+    fi
+
+    echo "searching for dependencies of $toPatch" >&2
+
+    # We're going to find all dependencies based on ldd output, so we need to
+    # clear the RPATH first.
+    patchelf --remove-rpath "$toPatch"
+
+    local missing="$(
+        ldd "$toPatch" 2> /dev/null | \
+            sed -n -e 's/^[\t ]*\([^ ]\+\) => not found.*/\1/p'
+    )"
+
+    # This ensures that we get the output of all missing dependencies instead
+    # of failing at the first one, because it's more useful when working on a
+    # new package where you don't yet know its dependencies.
+    local -i depNotFound=0
+
+    for dep in $missing; do
+        echo -n "  $dep -> " >&2
+        if findDependency "$dep" "$(getSoArch "$toPatch")"; then
+            rpath="$rpath${rpath:+:}${foundDependency%/*}"
+            echo "found: $foundDependency" >&2
+        else
+            echo "not found!" >&2
+            depNotFound=1
+        fi
+    done
+
+    # This makes sure the builder fails if we didn't find a dependency, because
+    # the stdenv setup script is run with set -e. The actual error is emitted
+    # earlier in the previous loop.
+    [ $depNotFound -eq 0 ]
+
+    if [ -n "$rpath" ]; then
+        echo "setting RPATH to: $rpath" >&2
+        patchelf --set-rpath "$rpath" "$toPatch"
+    fi
+}
+
+autoPatchelf() {
+    echo "automatically fixing dependencies for ELF files" >&2
+
+    # Add all shared objects of the current output path to the start of
+    # cachedDependencies so that it's choosen first in findDependency.
+    cachedDependencies+=(
+        $(find "$prefix" \! -type d \( -name '*.so' -o -name '*.so.*' \))
+    )
+    local elffile
+
+    # Here we actually have a subshell, which also means that
+    # $cachedDependencies is final at this point, so whenever we want to run
+    # findDependency outside of this, the dependency cache needs to be rebuilt
+    # from scratch, so keep this in mind if you want to run findDependency
+    # outside of this function.
+    findElfs "$prefix" | while read -r elffile; do
+        autoPatchelfFile "$elffile"
+    done
+}
+
+fixupOutputHooks+=(autoPatchelf)
diff --git a/pkgs/build-support/setup-hooks/gog-unpack.sh b/pkgs/build-support/setup-hooks/gog-unpack.sh
new file mode 100644
index 000000000000..559b543fadfc
--- /dev/null
+++ b/pkgs/build-support/setup-hooks/gog-unpack.sh
@@ -0,0 +1,11 @@
+unpackPhase="unpackGog"
+
+unpackGog() {
+    runHook preUnpackGog
+
+    innoextract --silent --extract --exclude-temp "${src}"
+
+    find . -depth -print -execdir rename -f 'y/A-Z/a-z/' '{}' \;
+
+    runHook postUnpackGog
+}
diff --git a/pkgs/build-support/vm/default.nix b/pkgs/build-support/vm/default.nix
index d599f9bbb65f..642365bdeb5c 100644
--- a/pkgs/build-support/vm/default.nix
+++ b/pkgs/build-support/vm/default.nix
@@ -26,6 +26,7 @@ rec {
 
   modulesClosure = makeModulesClosure {
     inherit kernel rootModules;
+    firmware = kernel;
   };
 
 
diff --git a/pkgs/common-updater/scripts/update-source-version b/pkgs/common-updater/scripts/update-source-version
index 5922f3f30cf2..4c32ae046f31 100755
--- a/pkgs/common-updater/scripts/update-source-version
+++ b/pkgs/common-updater/scripts/update-source-version
@@ -74,7 +74,7 @@ fi
 if [ -z "$newHash" ]; then
     nix-build --no-out-link -A "$attr.src" 2>"$attr.fetchlog" >/dev/null || true
     # FIXME: use nix-build --hash here once https://github.com/NixOS/nix/issues/1172 is fixed
-    newHash=$(egrep -v "killing process|dependencies couldn't be built" "$attr.fetchlog" | tail -n2 | grep "output path .* has .* hash .* when .* was expected" | head -n1 | tr -dc '\040-\177' | tr -d "'" | awk '{ print $(NF-4) }')
+    newHash=$(egrep -v "killing process|dependencies couldn't be built" "$attr.fetchlog" | tail -n2 | sed "s~output path .* has .* hash \(.*\) when .* was expected\|fixed-output derivation produced path '.*' with .* hash '\(.*\)' instead of the expected hash '.*'~\1\2~" | head -n1)
 fi
 
 if [ -z "$newHash" ]; then
diff --git a/pkgs/data/documentation/bgnet/default.nix b/pkgs/data/documentation/bgnet/default.nix
index e205129db194..51ebe704beac 100644
--- a/pkgs/data/documentation/bgnet/default.nix
+++ b/pkgs/data/documentation/bgnet/default.nix
@@ -27,6 +27,6 @@ stdenv.mkDerivation rec {
     homepage = https://beej.us/guide/bgnet/;
     license = lib.licenses.unfree;
 
-    maintainers = with lib.maintainers; [ profpatsch ];
+    maintainers = with lib.maintainers; [ Profpatsch ];
   };
 }
diff --git a/pkgs/data/documentation/mustache-spec/default.nix b/pkgs/data/documentation/mustache-spec/default.nix
index 5659cac6703d..08690b7cecfc 100644
--- a/pkgs/data/documentation/mustache-spec/default.nix
+++ b/pkgs/data/documentation/mustache-spec/default.nix
@@ -36,7 +36,7 @@ stdenv.mkDerivation rec {
 
     homepage = http://mustache.github.io/;
     license = lib.licenses.mit;
-    maintainers = with lib.maintainers; [ profpatsch ];
+    maintainers = with lib.maintainers; [ Profpatsch ];
     platforms = lib.platforms.all;
   };
 }
diff --git a/pkgs/data/documentation/zeal/default.nix b/pkgs/data/documentation/zeal/default.nix
index 68a1fb92cc86..e9225900cb7b 100644
--- a/pkgs/data/documentation/zeal/default.nix
+++ b/pkgs/data/documentation/zeal/default.nix
@@ -4,13 +4,13 @@
 
 stdenv.mkDerivation rec {
   name = "zeal-${version}";
-  version = "0.5.0";
+  version = "0.6.0";
 
   src = fetchFromGitHub {
     owner  = "zealdocs";
     repo   = "zeal";
     rev    = "v${version}";
-    sha256 = "14gm9n2zmqgig4nz5i3089dhn0a7c175g1szr0zg9yzr9j2hk0mr";
+    sha256 = "0zsrb89jz04b8in1d69p7mg001yayyljc47vdlvm48cjbhvxwj0k";
   };
 
   # while ads can be disabled from the user settings, by default they are not so
diff --git a/pkgs/data/documentation/zeal/remove_ads.patch b/pkgs/data/documentation/zeal/remove_ads.patch
index 1c0b3c081f16..be0cab305eb5 100644
--- a/pkgs/data/documentation/zeal/remove_ads.patch
+++ b/pkgs/data/documentation/zeal/remove_ads.patch
@@ -1,17 +1,23 @@
+commit 1b61397175b6e60f23224db463301c9057830859
+Author: Peter Hoeg <peter@hoeg.com>
+Date:   Mon Feb 19 07:38:03 2018 +0800
+
+    strip container with ads
+
 diff --git a/src/app/resources/browser/welcome.html b/src/app/resources/browser/welcome.html
-index 22e6278..ec09771 100644
+index bb3f511..67382b2 100644
 --- a/src/app/resources/browser/welcome.html
 +++ b/src/app/resources/browser/welcome.html
-@@ -35,12 +35,6 @@
-     <div class="hero-foot">
-       <div class="container">
-         <div class="content has-text-centered">
--          <div id="carboncontainer">
--            <div id="carbon" class="box">
--              <script async type="text/javascript" src="https://cdn.carbonads.com/carbon.js?zoneid=1673&serve=C6AILKT&placement=zealdocsforwindowsorg"
--                onerror="document.getElementById('carboncontainer').style.display = 'none';" id="_carbonads_js"></script>
+@@ -20,12 +20,6 @@
+               <span id="version" class="has-text-weight-light is-size-5"></span>
+             </p>
+             <p class="subtitle">Docs for everyone</p>
+-            <div id="carboncontainer" style="margin-top: 75px;">
+-              <div id="carbon" class="box">
+-                <script async type="text/javascript" src="https://cdn.carbonads.com/carbon.js?zoneid=1673&serve=C6AILKT&placement=zealdocsforwindowsorg"
+-                  onerror="document.getElementById('carboncontainer').style.display = 'none';" id="_carbonads_js"></script>
+-              </div>
 -            </div>
--          </div>
-           <p>
-             <a class="icon" href="https://github.com/zealdocs/zeal">
-               <i class="fa fa-github"></i>
+           </div>
+           <div class="column">
+             <p class="subtitle is-5">Customize</p>
diff --git a/pkgs/data/fonts/babelstone-han/default.nix b/pkgs/data/fonts/babelstone-han/default.nix
index 97333f7d953a..b33295f89b2c 100644
--- a/pkgs/data/fonts/babelstone-han/default.nix
+++ b/pkgs/data/fonts/babelstone-han/default.nix
@@ -1,16 +1,16 @@
 {stdenv, fetchzip}:
 
 let
-  version = "10.0.0";
+  version = "10.0.2";
 in fetchzip {
   name = "babelstone-han-${version}";
 
-  url = http://www.babelstone.co.uk/Fonts/0816/BabelStoneHan.zip;
+  url = http://www.babelstone.co.uk/Fonts/7932/BabelStoneHan.zip;
   postFetch = ''
     mkdir -p $out/share/fonts/truetype
     unzip $downloadedFile '*.ttf' -d $out/share/fonts/truetype
   '';
-  sha256 = "0648hv5c1hq3bq7mlk7bnmflzzqj4wh137bjqyrwj5hy3nqzvl5r";
+  sha256 = "17r5cf028v66yzjf9qbncn4rchv2xxkl2adxr35ppg1l7zssz9v6";
 
   meta = with stdenv.lib; {
     description = "Unicode CJK font with over 32600 Han characters";
diff --git a/pkgs/data/fonts/fira-code/symbols.nix b/pkgs/data/fonts/fira-code/symbols.nix
index c19fbccb1420..624616bdd580 100644
--- a/pkgs/data/fonts/fira-code/symbols.nix
+++ b/pkgs/data/fonts/fira-code/symbols.nix
@@ -20,7 +20,7 @@ fetchzip {
       See https://github.com/tonsky/FiraCode/issues/211.
     '';
     license = licenses.ofl;
-    maintainers = [ maintainers.profpatsch ];
+    maintainers = [ maintainers.Profpatsch ];
     homepage = "https://github.com/tonsky/FiraCode/issues/211#issuecomment-239058632";
   };
 }
diff --git a/pkgs/data/fonts/fixedsys-excelsior/default.nix b/pkgs/data/fonts/fixedsys-excelsior/default.nix
new file mode 100644
index 000000000000..b0c481dfcb5c
--- /dev/null
+++ b/pkgs/data/fonts/fixedsys-excelsior/default.nix
@@ -0,0 +1,38 @@
+{ stdenv, fetchurl } :
+
+let 
+  major = "3";
+  minor = "00";
+  version = "${major}.${minor}";
+
+in
+
+stdenv.mkDerivation rec {
+  name = "fixedsys-excelsior-${version}";
+
+  src = fetchurl {
+    url = http://www.fixedsysexcelsior.com/fonts/FSEX300.ttf;
+    sha256 = "6ee0f3573bc5e33e93b616ef6282f49bc0e227a31aa753ac76ed2e3f3d02056d";
+  };
+
+  phases = [ "installPhase" ];
+
+  installPhase = ''
+    mkdir -p $out/share/fonts/truetype/
+    cp $src $out/share/fonts/truetype/${name}.ttf
+  '';
+
+  outputHashMode = "recursive";
+
+  outputHashAlgo = "sha256";
+
+  outputHash = "32d6f07f1ff08c764357f8478892b2ba5ade23427af99759f34a0ba24bcd2e37";
+  
+  meta = {
+    description = "Pan-unicode version of Fixedsys, a classic DOS font.";
+    homepage = http://www.fixedsysexcelsior.com/;
+    platforms = stdenv.lib.platforms.all;
+    license = stdenv.lib.licenses.publicDomain;
+    maintainers = [ stdenv.lib.maintainers.ninjatrappeur ];
+  };
+}
diff --git a/pkgs/data/fonts/hack/default.nix b/pkgs/data/fonts/hack/default.nix
index 0edd27dab0e3..eb7943265397 100644
--- a/pkgs/data/fonts/hack/default.nix
+++ b/pkgs/data/fonts/hack/default.nix
@@ -1,20 +1,18 @@
 { stdenv, fetchzip }:
 
 let
-  version = "2.020";
+  version = "3.002";
 in fetchzip rec {
   name = "hack-font-${version}";
 
-  url = let
-    version_ = with stdenv.lib; concatStringsSep "_" (splitString "." version);
-  in "https://github.com/chrissimpkins/Hack/releases/download/v${version}/Hack-v${version_}-ttf.zip";
+  url = "https://github.com/chrissimpkins/Hack/releases/download/v${version}/Hack-v${version}-ttf.zip";
 
   postFetch = ''
     mkdir -p $out/share/fonts
     unzip -j $downloadedFile \*.ttf -d $out/share/fonts/hack
   '';
 
-  sha256 = "0cpsglb9vnhmpsn496aqisfvmq3yxvjnj7c361dspy0fn6z8x60c";
+  sha256 = "11f3hl4nvxq6pvsmwr1c1r5wrxhrp7ixr5bshrz2dmqn7l8bxa63";
 
   meta = with stdenv.lib; {
     description = "A typeface designed for source code";
@@ -25,7 +23,7 @@ in fetchzip rec {
       The face has been re-designed with a larger glyph set, modifications of
       the original glyph shapes, and meticulous attention to metrics.
     '';
-    homepage = http://sourcefoundry.org/hack/;
+    homepage = https://sourcefoundry.org/hack/;
 
     /*
      "The font binaries are released under a license that permits unlimited
@@ -36,6 +34,7 @@ in fetchzip rec {
       the license is available in LICENSE.md" (From the GitHub page)
     */
     license = licenses.free;
+    maintainers = with maintainers; [ dywedir ];
     platforms = platforms.all;
   };
 }
diff --git a/pkgs/data/fonts/hasklig/default.nix b/pkgs/data/fonts/hasklig/default.nix
index 96af2e573a2f..de7dd5834e4b 100644
--- a/pkgs/data/fonts/hasklig/default.nix
+++ b/pkgs/data/fonts/hasklig/default.nix
@@ -20,6 +20,6 @@ in fetchzip {
     description = "A font with ligatures for Haskell code based off Source Code Pro";
     license = licenses.ofl;
     platforms = platforms.all;
-    maintainers = with maintainers; [ davidrusu profpatsch ];
+    maintainers = with maintainers; [ davidrusu Profpatsch ];
   };
 }
diff --git a/pkgs/data/fonts/iosevka/bin.nix b/pkgs/data/fonts/iosevka/bin.nix
index 3ac8bd339a08..1571f8e573de 100644
--- a/pkgs/data/fonts/iosevka/bin.nix
+++ b/pkgs/data/fonts/iosevka/bin.nix
@@ -1,7 +1,7 @@
 { stdenv, fetchzip }:
 
 let
-  version = "1.13.3";
+  version = "1.14.0";
 in fetchzip rec {
   name = "iosevka-bin-${version}";
 
@@ -12,7 +12,7 @@ in fetchzip rec {
     unzip -j $downloadedFile \*.ttc -d $out/share/fonts/iosevka
   '';
 
-  sha256 = "0103rjxcp2sis42xp7fh7g8i03h5snvs8n78lgsf79g8ssw0p9d4";
+  sha256 = "03zgh5dfx58sxrprhqi8cyc18sh05k84yc262bn81vavl6lm14ns";
 
   meta = with stdenv.lib; {
     homepage = https://be5invis.github.io/Iosevka/;
diff --git a/pkgs/data/fonts/iosevka/default.nix b/pkgs/data/fonts/iosevka/default.nix
index bf36d23e5c2f..7c1676ed8b68 100644
--- a/pkgs/data/fonts/iosevka/default.nix
+++ b/pkgs/data/fonts/iosevka/default.nix
@@ -7,6 +7,7 @@
   # Custom font set options.
   # See https://github.com/be5invis/Iosevka#build-your-own-style
   design ? [], upright ? [], italic ? [], oblique ? [],
+  family ? null, weights ? [],
   # Custom font set name. Required if any custom settings above.
   set ? null
 }:
@@ -15,6 +16,8 @@ assert (design != []) -> set != null;
 assert (upright != []) -> set != null;
 assert (italic != []) -> set != null;
 assert (oblique != []) -> set != null;
+assert (family != null) -> set != null;
+assert (weights != []) -> set != null;
 
 let
   installPackageLock = import ./package-lock.nix { inherit fetchurl lib; };
@@ -23,13 +26,13 @@ in
 let pname = if set != null then "iosevka-${set}" else "iosevka"; in
 
 let
-  version = "1.13.3";
+  version = "1.14.0";
   name = "${pname}-${version}";
   src = fetchFromGitHub {
     owner = "be5invis";
     repo ="Iosevka";
     rev = "v${version}";
-    sha256 = "0wfhfiahllq8ngn0mybvp29cfcm7b8ndk3fyhizd620wrj50bazf";
+    sha256 = "0mmdlrd9a0rhmmdqwkk6v7cdvbi23djr5kkiyv38llk11j3w0clp";
   };
 in
 
@@ -44,8 +47,11 @@ let
     (param "upright" upright)
     (param "italic" italic)
     (param "oblique" oblique)
+    (if family != null then "family='${family}'" else null)
+    (param "weights" weights)
   ]);
-  custom = design != [] || upright != [] || italic != [] || oblique != [];
+  custom = design != [] || upright != [] || italic != [] || oblique != []
+    || family != null || weights != [];
 in
 
 stdenv.mkDerivation {
diff --git a/pkgs/data/fonts/iosevka/package-lock.json b/pkgs/data/fonts/iosevka/package-lock.json
index 4e8a9be8807c..54de11a1f422 100644
--- a/pkgs/data/fonts/iosevka/package-lock.json
+++ b/pkgs/data/fonts/iosevka/package-lock.json
@@ -1,13 +1,13 @@
 {
   "name": "iosevka",
-  "version": "1.13.3",
+  "version": "1.14.0",
   "lockfileVersion": 1,
   "requires": true,
   "dependencies": {
     "JSONStream": {
-      "version": "1.3.1",
-      "resolved": "https://registry.npmjs.org/JSONStream/-/JSONStream-1.3.1.tgz",
-      "integrity": "sha1-cH92HgHa6eFvG8+TcDt4xwlmV5o=",
+      "version": "1.3.2",
+      "resolved": "https://registry.npmjs.org/JSONStream/-/JSONStream-1.3.2.tgz",
+      "integrity": "sha1-wQI3G27Dp887hHygDCC7D85Mbeo=",
       "requires": {
         "jsonparse": "1.3.1",
         "through": "2.3.8"
@@ -24,9 +24,9 @@
       "integrity": "sha1-w7M6te42DYbg5ijwRorn7yfWVN8="
     },
     "bezier-js": {
-      "version": "2.2.3",
-      "resolved": "https://registry.npmjs.org/bezier-js/-/bezier-js-2.2.3.tgz",
-      "integrity": "sha1-xVdBFqSjVkpxU41z4LDVFdqN3sU="
+      "version": "2.2.5",
+      "resolved": "https://registry.npmjs.org/bezier-js/-/bezier-js-2.2.5.tgz",
+      "integrity": "sha512-HGh+GevPguxrAmnWF2/A+8c8FEatnKcE6WttpYWA5fn1CfpJz4reFbr11DuyFs2gwaIo9vF7aVXW2xg1iaqvyg=="
     },
     "builtin-modules": {
       "version": "1.1.1",
@@ -39,11 +39,11 @@
       "integrity": "sha1-MvxLn82vhF/N9+c7uXysImHwqwo="
     },
     "caryll-shapeops": {
-      "version": "0.2.1",
-      "resolved": "https://registry.npmjs.org/caryll-shapeops/-/caryll-shapeops-0.2.1.tgz",
-      "integrity": "sha1-uEBMpQ5pAMB6vJNXubsAhbQEa8s=",
+      "version": "0.3.1",
+      "resolved": "https://registry.npmjs.org/caryll-shapeops/-/caryll-shapeops-0.3.1.tgz",
+      "integrity": "sha512-3TdH6DZGL08S6qEvCZLNaOHyFvmzQts8m+TyYEvc6/PiI+XgX5mIag1/CKczIM8e2QtDr8JKW8foo4VNOM8/Og==",
       "requires": {
-        "bezier-js": "2.2.3",
+        "bezier-js": "2.2.5",
         "clipper-lib": "1.0.0"
       }
     },
@@ -54,7 +54,7 @@
       "requires": {
         "cross-spawn": "4.0.2",
         "node-version": "1.1.0",
-        "promise-polyfill": "6.0.2"
+        "promise-polyfill": "6.1.0"
       }
     },
     "clipper-lib": {
@@ -457,7 +457,7 @@
       "resolved": "https://registry.npmjs.org/megaminx/-/megaminx-0.3.3.tgz",
       "integrity": "sha512-lZBSLMro+XYJIix9zCZ8N6nZgixpjUPkX6CKuh+Y9Wl9bir/2Fp27NWapA0cNQCPrzOOI9sAwxc4BI14aIdumw==",
       "requires": {
-        "JSONStream": "1.3.1",
+        "JSONStream": "1.3.2",
         "child-process-promise": "2.2.1",
         "cubic2quad": "1.1.1",
         "fs-extra": "3.0.1",
@@ -469,13 +469,13 @@
       "resolved": "https://registry.npmjs.org/mem/-/mem-1.1.0.tgz",
       "integrity": "sha1-Xt1StIXKHZAP5kiVUFOZoN+kX3Y=",
       "requires": {
-        "mimic-fn": "1.1.0"
+        "mimic-fn": "1.2.0"
       }
     },
     "mimic-fn": {
-      "version": "1.1.0",
-      "resolved": "https://registry.npmjs.org/mimic-fn/-/mimic-fn-1.1.0.tgz",
-      "integrity": "sha1-5md4PZLonb00KBi1IwudYqZyrRg="
+      "version": "1.2.0",
+      "resolved": "https://registry.npmjs.org/mimic-fn/-/mimic-fn-1.2.0.tgz",
+      "integrity": "sha512-jf84uxzwiuiIVKiOLpfYk7N46TSy8ubTonmneY9vrpHNAnp0QBt2BxWV9dO3/j+BoVAb+a5G6YDPW3M5HOdMWQ=="
     },
     "node-version": {
       "version": "1.1.0",
@@ -489,7 +489,7 @@
       "requires": {
         "hosted-git-info": "2.5.0",
         "is-builtin-module": "1.0.0",
-        "semver": "5.4.1",
+        "semver": "5.5.0",
         "validate-npm-package-license": "3.0.1"
       }
     },
@@ -538,18 +538,26 @@
       "integrity": "sha1-P7z7FbiZpEEjs0ttzBi3JDNqLK4="
     },
     "p-limit": {
-      "version": "1.1.0",
-      "resolved": "https://registry.npmjs.org/p-limit/-/p-limit-1.1.0.tgz",
-      "integrity": "sha1-sH/y2aXYi+yAYDWJWiurZqJ5iLw="
+      "version": "1.2.0",
+      "resolved": "https://registry.npmjs.org/p-limit/-/p-limit-1.2.0.tgz",
+      "integrity": "sha512-Y/OtIaXtUPr4/YpMv1pCL5L5ed0rumAaAeBSj12F+bSlMdys7i8oQF/GUJmfpTS/QoaRrS/k6pma29haJpsMng==",
+      "requires": {
+        "p-try": "1.0.0"
+      }
     },
     "p-locate": {
       "version": "2.0.0",
       "resolved": "https://registry.npmjs.org/p-locate/-/p-locate-2.0.0.tgz",
       "integrity": "sha1-IKAQOyIqcMj9OcwuWAaA893l7EM=",
       "requires": {
-        "p-limit": "1.1.0"
+        "p-limit": "1.2.0"
       }
     },
+    "p-try": {
+      "version": "1.0.0",
+      "resolved": "https://registry.npmjs.org/p-try/-/p-try-1.0.0.tgz",
+      "integrity": "sha1-y8ec26+P1CKOE/Yh8rGiN8GyB7M="
+    },
     "pad": {
       "version": "1.2.1",
       "resolved": "https://registry.npmjs.org/pad/-/pad-1.2.1.tgz",
@@ -661,9 +669,9 @@
       "integrity": "sha1-IZMqVJ9eUv/ZqCf1cOBL5iqX2lQ="
     },
     "promise-polyfill": {
-      "version": "6.0.2",
-      "resolved": "https://registry.npmjs.org/promise-polyfill/-/promise-polyfill-6.0.2.tgz",
-      "integrity": "sha1-2chtPcTcLfkBboiUbe/Wm0m0EWI="
+      "version": "6.1.0",
+      "resolved": "https://registry.npmjs.org/promise-polyfill/-/promise-polyfill-6.1.0.tgz",
+      "integrity": "sha1-36lpQ+qcEh/KTem1hoyznTRy4Fc="
     },
     "pseudomap": {
       "version": "1.0.2",
@@ -708,9 +716,9 @@
       }
     },
     "semver": {
-      "version": "5.4.1",
-      "resolved": "https://registry.npmjs.org/semver/-/semver-5.4.1.tgz",
-      "integrity": "sha512-WfG/X9+oATh81XtllIo/I8gOiY9EXRdv1cQdyykeXK17YcUW3EXUAi2To4pcH6nZtJPr7ZOpM5OMyWJZm+8Rsg=="
+      "version": "5.5.0",
+      "resolved": "https://registry.npmjs.org/semver/-/semver-5.5.0.tgz",
+      "integrity": "sha512-4SJ3dm0WAwWy/NVeioZh5AntkdJoWKxHxcmyP622fOkgHa4z3R0TdBJICINyaSDE6uNwVc8gZr+ZinwZAH4xIA=="
     },
     "set-blocking": {
       "version": "2.0.0",
diff --git a/pkgs/data/fonts/league-of-moveable-type/default.nix b/pkgs/data/fonts/league-of-moveable-type/default.nix
index b79855789981..5657b8380a96 100644
--- a/pkgs/data/fonts/league-of-moveable-type/default.nix
+++ b/pkgs/data/fonts/league-of-moveable-type/default.nix
@@ -46,6 +46,6 @@ stdenv.mkDerivation rec {
     license = stdenv.lib.licenses.ofl;
 
     platforms = stdenv.lib.platforms.all;
-    maintainers = with stdenv.lib.maintainers; [ bergey profpatsch ];
+    maintainers = with stdenv.lib.maintainers; [ bergey Profpatsch ];
   };
 }
diff --git a/pkgs/data/fonts/raleway/default.nix b/pkgs/data/fonts/raleway/default.nix
index 2ba9069d48be..009295c58691 100644
--- a/pkgs/data/fonts/raleway/default.nix
+++ b/pkgs/data/fonts/raleway/default.nix
@@ -35,6 +35,6 @@ in fetchzip {
     homepage = https://github.com/impallari/Raleway;
     license = stdenv.lib.licenses.ofl;
 
-    maintainers = with stdenv.lib.maintainers; [ profpatsch ];
+    maintainers = with stdenv.lib.maintainers; [ Profpatsch ];
   };
 }
diff --git a/pkgs/data/fonts/tex-gyre/default.nix b/pkgs/data/fonts/tex-gyre/default.nix
new file mode 100644
index 000000000000..4bd77d894e4b
--- /dev/null
+++ b/pkgs/data/fonts/tex-gyre/default.nix
@@ -0,0 +1,90 @@
+{ stdenv, fetchzip }:
+
+let
+  mkVariant = variant: { displayName, version, abbreviation, sha256, outputHash }: stdenv.mkDerivation {
+    name = "tex-gyre-${variant}-${version}";
+    inherit version;
+
+    src = fetchzip {
+      url = "http://www.gust.org.pl/projects/e-foundry/tex-gyre/${variant}/${abbreviation}${version}otf.zip";
+      stripRoot = false;
+      inherit sha256;
+    };
+
+    installPhase = ''
+      mkdir -p $out/share/fonts/opentype/
+      cp -v *.otf $out/share/fonts/opentype/
+    '';
+
+    outputHashAlgo = "sha256";
+    outputHashMode = "recursive";
+    outputHash = outputHash;
+
+    meta = with stdenv.lib; {
+      homepage = http://www.gust.org.pl/projects/e-foundry/tex-gyre;
+      # "The TeX Gyre fonts are licensed under the GUST Font License (GFL),
+      # which is a free license, legally equivalent to the LaTeX Project Public
+      # License (LPPL), version 1.3c or later." - GUST website
+      license = licenses.lppl13c;
+      maintainers = with maintainers; [ jtojnar ];
+      platforms = platforms.all;
+    };
+  };
+in stdenv.lib.mapAttrs mkVariant {
+  adventor = {
+    displayName = "Adventor";
+    version = "2.003";
+    sha256 = "13wnb04z9f766ij30x8bpkn4xzv7n466g07dlbimx7qvglxl605g";
+    outputHash = "1cz0lkk2a5fg8r8175h454va499hzln3s99dadxhh147nx1914pm";
+    abbreviation = "qag";
+  };
+  bonum = {
+    displayName = "Bonum";
+    version = "2.004";
+    sha256 = "0qbrs98knx4h0b297c5n3vav4mkal1a95ai2dzmdc10pghfzl8vv";
+    outputHash = "0bid8gzwz50ylmm8jyqf9s4nfvy6cp1x34wbyrh4gyk1ki6hf3z1";
+    abbreviation = "qbk";
+  };
+  chorus = {
+    displayName = "Chorus";
+    version = "2.003";
+    sha256 = "1b0zak27fzmapwbf2jasvsd95vhnqyc92n985d1lc1ivwja1zgfa";
+    outputHash = "0fqifd45c1ys6y98b66lmldfbv7wjb2414fs9swicv4n7xvl3cp1";
+    abbreviation = "qzc";
+  };
+  cursor = {
+    displayName = "Cursor";
+    version = "2.004";
+    sha256 = "0ck3jm33bk2xsxp5d2irzd3j24zb49f0gnjvd1nikg1ivk8w85ng";
+    outputHash = "0i76835xqlkrnlx303mx63m0f4899j056c2ag2fl6p9qk8s4rskp";
+    abbreviation = "qcr";
+  };
+  heros = {
+    displayName = "Heros";
+    version = "2.004";
+    sha256 = "1fj2srxxf6ap913y5yd3dn4jzg828j7381gifs39nm5lnzmgw78y";
+    outputHash = "16y76ab46fxm9k8wfmwx4w0cl96yrmjywz587lyr08s0agp1v3kf";
+    abbreviation = "qhv";
+  };
+  pagella = {
+    displayName = "Pagella";
+    version ="2.004";
+    sha256 = "0b2pjhw1ihnl951slln6d6vafjd3i6p4i947lwybvg8081qfvd9z";
+    outputHash = "0c6s0r14qax3b4amvm9nffwzby8mm4p7r2hfb8yv9jzhjwa5z8rd";
+    abbreviation = "qpl";
+  };
+  schola = {
+    displayName = "Schola";
+    version = "2.005";
+    sha256 = "05z3gk4mm0sa7wwjcv31j2xlzqhwhcncpamn0kn9y0221cdknyp8";
+    outputHash = "1yqq1ngcylhldrh1v35l439k72szq9m4gx6g0wh235fk65chb2bm";
+    abbreviation = "qcs";
+  };
+  termes = {
+    displayName = "Termes";
+    version = "2.004";
+    sha256 = "1aq3yqbgkc3z20dkcqyhicsyq0afbgg4l397z96sd8a16jyz2x8k";
+    outputHash = "1igw821m601h8937pix6yish4d8fxmz3h4j9hripf41bxsiafzzg";
+    abbreviation = "qtm";
+  };
+}
diff --git a/pkgs/data/misc/hackage/default.nix b/pkgs/data/misc/hackage/default.nix
index bdf2abf9b6f8..7f7932d01b4f 100644
--- a/pkgs/data/misc/hackage/default.nix
+++ b/pkgs/data/misc/hackage/default.nix
@@ -1,6 +1,6 @@
 { fetchurl }:
 
 fetchurl {
-  url = "https://github.com/commercialhaskell/all-cabal-hashes/archive/00012ce23948b9547fe6609d595109741e0f58cf.tar.gz";
-  sha256 = "1swgfx7b41jxq0pyws2wipdiyvy8nn6cp54yj3ip3r9l3gdv3f7b";
+  url = "https://github.com/commercialhaskell/all-cabal-hashes/archive/4c8b3501ea6fc9f41cd192ddc08e2d9583a1e679.tar.gz";
+  sha256 = "0aa4pimgllqgn8bcy2p2cdwbpz6s6wk8j41w35jvzaqfj15gysnq";
 }
diff --git a/pkgs/desktops/gnome-3/core/gjs/default.nix b/pkgs/desktops/gnome-3/core/gjs/default.nix
index dd607e01caef..e2ae74931030 100644
--- a/pkgs/desktops/gnome-3/core/gjs/default.nix
+++ b/pkgs/desktops/gnome-3/core/gjs/default.nix
@@ -1,21 +1,41 @@
-{ fetchurl, stdenv, pkgconfig, gnome3, gtk3, gobjectIntrospection
-, spidermonkey_52, pango, readline, glib, libxml2, dbus }:
+{ fetchurl, stdenv, pkgconfig, gnome3, gtk3, atk, gobjectIntrospection
+, spidermonkey_52, pango, readline, glib, libxml2, dbus, gdk_pixbuf
+, makeWrapper }:
 
 stdenv.mkDerivation rec {
   inherit (import ./src.nix fetchurl) name src;
 
-  nativeBuildInputs = [ pkgconfig ];
+  outputs = [ "out" "installedTests" ];
+
+  nativeBuildInputs = [ pkgconfig makeWrapper ];
   buildInputs = [ libxml2 gobjectIntrospection gtk3 glib pango readline dbus ];
 
   propagatedBuildInputs = [ spidermonkey_52 ];
 
+  configureFlags = [
+    "--enable-installed-tests"
+  ];
+
+  postPatch = ''
+    for f in installed-tests/*.test.in; do
+      substituteInPlace "$f" --subst-var-by pkglibexecdir "$installedTests/libexec/gjs"
+    done
+  '';
+
   postInstall = ''
     sed 's|-lreadline|-L${readline.out}/lib -lreadline|g' -i $out/lib/libgjs.la
+
+    moveToOutput "share/installed-tests" "$installedTests"
+    moveToOutput "libexec/gjs/installed-tests" "$installedTests"
+
+    wrapProgram "$installedTests/libexec/gjs/installed-tests/minijasmine" \
+      --prefix GI_TYPELIB_PATH : "${stdenv.lib.makeSearchPath "lib/girepository-1.0" [ gtk3 atk pango.out gdk_pixbuf ]}:$installedTests/libexec/gjs/installed-tests"
   '';
 
   meta = with stdenv.lib; {
+    description = "JavaScript bindings for GNOME";
     maintainers = gnome3.maintainers;
     platforms = platforms.linux;
+    license = licenses.lgpl2Plus;
   };
-
 }
diff --git a/pkgs/desktops/gnome-3/core/gjs/src.nix b/pkgs/desktops/gnome-3/core/gjs/src.nix
index d3112f02f8ac..d42b2e845585 100644
--- a/pkgs/desktops/gnome-3/core/gjs/src.nix
+++ b/pkgs/desktops/gnome-3/core/gjs/src.nix
@@ -1,10 +1,10 @@
 # Autogenerated by maintainers/scripts/gnome.sh update
 
 fetchurl: {
-  name = "gjs-1.50.2";
+  name = "gjs-1.50.4";
 
   src = fetchurl {
-    url = mirror://gnome/sources/gjs/1.50/gjs-1.50.2.tar.xz;
-    sha256 = "2fad902cf7a7806454121c03918755c646fcfd6b08b52d488987db4e2d691ff3";
+    url = mirror://gnome/sources/gjs/1.50/gjs-1.50.4.tar.xz;
+    sha256 = "b336e8709347e3c94245f6cbc3465f9a49f3ae491a25f49f8a97268f5235b93a";
   };
 }
diff --git a/pkgs/desktops/gnome-3/core/mutter/default.nix b/pkgs/desktops/gnome-3/core/mutter/default.nix
index 39b2438a8f02..e1343d9977d7 100644
--- a/pkgs/desktops/gnome-3/core/mutter/default.nix
+++ b/pkgs/desktops/gnome-3/core/mutter/default.nix
@@ -1,7 +1,7 @@
 { fetchurl, stdenv, pkgconfig, gnome3, intltool, gobjectIntrospection, upower, cairo
 , pango, cogl, clutter, libstartup_notification, zenity, libcanberra_gtk3
 , libtool, makeWrapper, xkeyboard_config, libxkbfile, libxkbcommon, libXtst, libinput
-, libgudev, libwacom, xwayland, autoreconfHook }:
+, pipewire, libgudev, libwacom, xwayland, autoreconfHook }:
 
 stdenv.mkDerivation rec {
   inherit (import ./src.nix fetchurl) name src;
@@ -9,6 +9,7 @@ stdenv.mkDerivation rec {
   configureFlags = [
     "--with-x"
     "--disable-static"
+    "--enable-remote-desktop"
     "--enable-shape"
     "--enable-sm"
     "--enable-startup-notification"
@@ -18,6 +19,15 @@ stdenv.mkDerivation rec {
     "--with-xwayland-path=${xwayland}/bin/Xwayland"
   ];
 
+  patches = [
+    # Pipewire 0.1.8 compatibility
+    (fetchurl {
+      name = "mutter-pipewire-0.1.8-compat.patch";
+      url = https://bugzilla.gnome.org/attachment.cgi?id=367356;
+      sha256 = "10bx5zf11wwhhy686w11ggikk56pbxydpbk9fbd947ir385x92cz";
+    })
+  ];
+
   propagatedBuildInputs = [
     # required for pkgconfig to detect mutter-clutter
     libXtst
@@ -30,7 +40,7 @@ stdenv.mkDerivation rec {
     gnome_desktop cairo pango cogl clutter zenity libstartup_notification
     gnome3.geocode_glib libinput libgudev libwacom
     libcanberra_gtk3 zenity xkeyboard_config libxkbfile
-    libxkbcommon
+    libxkbcommon pipewire
   ];
 
   preFixup = ''
diff --git a/pkgs/desktops/gnome-3/extensions/appindicator/default.nix b/pkgs/desktops/gnome-3/extensions/appindicator/default.nix
new file mode 100644
index 000000000000..c576112d57b9
--- /dev/null
+++ b/pkgs/desktops/gnome-3/extensions/appindicator/default.nix
@@ -0,0 +1,33 @@
+{ stdenv, fetchFromGitHub }:
+
+stdenv.mkDerivation rec {
+  name = "gnome-shell-extension-appindicator-${version}";
+  version = "22";
+
+  src = fetchFromGitHub {
+    owner = "Ubuntu";
+    repo = "gnome-shell-extension-appindicator";
+    rev = "v${version}";
+    sha256 = "1gqw54d55hxjj2hh04p0dx2j40bhi4ck9hgwlz8f7j4v7r37z0qw";
+  };
+
+  # This package has a Makefile, but it's used for building a zip for
+  # publication to extensions.gnome.org. Disable the build phase so
+  # installing doesn't build an unnecessary release.
+  dontBuild = true;
+
+  uuid = "appindicatorsupport@rgcjonas.gmail.com";
+  installPhase = ''
+    mkdir -p $out/share/gnome-shell/extensions/${uuid}
+    cp *.js $out/share/gnome-shell/extensions/${uuid}
+    cp -r interfaces-xml $out/share/gnome-shell/extensions/${uuid}
+    cp metadata.json $out/share/gnome-shell/extensions/${uuid}
+  '';
+
+  meta = with stdenv.lib; {
+    description = "AppIndicator/KStatusNotifierItem support for GNOME Shell";
+    license = licenses.gpl2Plus;
+    maintainers = with maintainers; [ jonafato ];
+    homepage = https://github.com/Ubuntu/gnome-shell-extension-appindicator;
+  };
+}
diff --git a/pkgs/desktops/gnome-3/extensions/battery-status/default.nix b/pkgs/desktops/gnome-3/extensions/battery-status/default.nix
new file mode 100644
index 000000000000..e1fe15c19d80
--- /dev/null
+++ b/pkgs/desktops/gnome-3/extensions/battery-status/default.nix
@@ -0,0 +1,27 @@
+{ stdenv, fetchFromGitHub }:
+
+stdenv.mkDerivation rec {
+  name = "gnome-shell-extension-battery-status-${version}";
+  version = "6";
+
+  src = fetchFromGitHub {
+    owner = "milliburn";
+    repo = "gnome-shell-extension-battery_status";
+    rev = "v${version}";
+    sha256 = "1w83h863mzffjnmk322xq90qf3y9dzay1w9yw5r0qnbsq1ljl8p4";
+  };
+
+  uuid = "battery_status@milliburn.github.com";
+
+  installPhase = ''
+    mkdir -p $out/share/gnome-shell/extensions
+    cp -r ${uuid} $out/share/gnome-shell/extensions/
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Configurable lightweight battery charge indicator and autohider";
+    license = licenses.gpl2;
+    maintainers = with maintainers; [ jonafato ];
+    homepage = https://github.com/milliburn/gnome-shell-extension-battery_status;
+  };
+}
diff --git a/pkgs/desktops/gnome-3/extensions/dash-to-dock/default.nix b/pkgs/desktops/gnome-3/extensions/dash-to-dock/default.nix
index 5265eab1cbc6..87e0d79dce68 100644
--- a/pkgs/desktops/gnome-3/extensions/dash-to-dock/default.nix
+++ b/pkgs/desktops/gnome-3/extensions/dash-to-dock/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "gnome-shell-dash-to-dock-${version}";
-  version = "v61";
+  version = "v62";
 
   src = fetchFromGitHub {
     owner = "micheleg";
     repo = "dash-to-dock";
     rev = "extensions.gnome.org-" + version;
-    sha256 = "152xzhal3wr40j0pv03v0gg20054n5hqqy3s10bkj2a0x830pgjk";
+    sha256 = "1kmf7vxhd1c1zgaim1pwmcmsg0kffng7hcl5gfcy5qb5yvb4dy5d";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/desktops/gnome-3/extensions/remove-dropdown-arrows/default.nix b/pkgs/desktops/gnome-3/extensions/remove-dropdown-arrows/default.nix
new file mode 100644
index 000000000000..42cd6d217de7
--- /dev/null
+++ b/pkgs/desktops/gnome-3/extensions/remove-dropdown-arrows/default.nix
@@ -0,0 +1,32 @@
+{ stdenv, fetchFromGitHub }:
+
+stdenv.mkDerivation rec {
+  name = "gnome-shell-extension-remove-dropdown-arrows-${version}";
+  version = "9";
+
+  src = fetchFromGitHub {
+    owner = "mpdeimos";
+    repo = "gnome-shell-remove-dropdown-arrows";
+    rev = "version/${version}";
+    sha256 = "1z9icxr75rd3cas28xjlmsbbd3j3sm1qvj6mp95jhfaqj821q665";
+  };
+
+  # This package has a Makefile, but it's used for publishing and linting, not
+  # for building. Disable the build phase so installing doesn't attempt to
+  # publish the extension.
+  dontBuild = true;
+
+  uuid = "remove-dropdown-arrows@mpdeimos.com";
+  installPhase = ''
+    mkdir -p $out/share/gnome-shell/extensions/${uuid}
+    cp extension.js $out/share/gnome-shell/extensions/${uuid}
+    cp metadata.json $out/share/gnome-shell/extensions/${uuid}
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Remove dropdown arrows from GNOME Shell Menus";
+    license = licenses.gpl3;
+    maintainers = with maintainers; [ jonafato ];
+    homepage = https://github.com/mpdeimos/gnome-shell-remove-dropdown-arrows;
+  };
+}
diff --git a/pkgs/desktops/gnome-3/extensions/taskwhisperer/default.nix b/pkgs/desktops/gnome-3/extensions/taskwhisperer/default.nix
new file mode 100644
index 000000000000..fcaa868c06f2
--- /dev/null
+++ b/pkgs/desktops/gnome-3/extensions/taskwhisperer/default.nix
@@ -0,0 +1,43 @@
+{ stdenv, substituteAll, fetchFromGitHub, taskwarrior }:
+
+stdenv.mkDerivation rec {
+  name = "gnome-shell-extension-taskwhisperer-${version}";
+  version = "11";
+
+  src = fetchFromGitHub {
+    owner = "cinatic";
+    repo = "taskwhisperer";
+    rev = "v${version}";
+    sha256 = "1g1301rwnfg5jci78bjpmgxrn78ra80m1zp2inhfsm8jssr1i426";
+  };
+
+  buildInputs = [ taskwarrior ];
+
+  uuid = "taskwhisperer-extension@infinicode.de";
+
+  installPhase = ''
+    mkdir -p $out/share/gnome-shell/extensions/${uuid}
+    cp *.js $out/share/gnome-shell/extensions/${uuid}
+    cp -r extra $out/share/gnome-shell/extensions/${uuid}
+    cp -r icons $out/share/gnome-shell/extensions/${uuid}
+    cp -r locale $out/share/gnome-shell/extensions/${uuid}
+    cp -r schemas $out/share/gnome-shell/extensions/${uuid}
+    cp metadata.json $out/share/gnome-shell/extensions/${uuid}
+    cp settings.ui $out/share/gnome-shell/extensions/${uuid}
+    cp stylesheet.css $out/share/gnome-shell/extensions/${uuid}
+  '';
+
+  patches = [
+    (substituteAll {
+      src = ./fix-paths.patch;
+      task = "${taskwarrior}/bin/task";
+    })
+  ];
+
+  meta = with stdenv.lib; {
+    description = "GNOME Shell TaskWarrior GUI";
+    license = licenses.gpl3Plus;
+    maintainers = with maintainers; [ jonafato ];
+    homepage = https://github.com/cinatic/taskwhisperer;
+  };
+}
diff --git a/pkgs/desktops/gnome-3/extensions/taskwhisperer/fix-paths.patch b/pkgs/desktops/gnome-3/extensions/taskwhisperer/fix-paths.patch
new file mode 100644
index 000000000000..310d6ea1b305
--- /dev/null
+++ b/pkgs/desktops/gnome-3/extensions/taskwhisperer/fix-paths.patch
@@ -0,0 +1,81 @@
+diff --git a/extra/create.sh b/extra/create.sh
+index a69e369..35d5ea1 100755
+--- a/extra/create.sh
++++ b/extra/create.sh
+@@ -1 +1 @@
+-bash -c "task add $1"
++bash -c "@task@ add $1"
+diff --git a/extra/modify.sh b/extra/modify.sh
+index 7964a26..8edd21b 100755
+--- a/extra/modify.sh
++++ b/extra/modify.sh
+@@ -1 +1 @@
+-bash -c "task $1 modify $2"
++bash -c "@task@ $1 modify $2"
+diff --git a/taskService.js b/taskService.js
+index dea40d8..ff35a80 100644
+--- a/taskService.js
++++ b/taskService.js
+@@ -186,7 +186,7 @@ const TaskService = new Lang.Class({
+ 
+         let project = projectName ? "project:" + projectName : "";
+ 
+-        let command = ['task', 'rc.json.array=on', status, project, 'export'];
++        let command = ['@task@', 'rc.json.array=on', status, project, 'export'];
+         let reader = new SpawnReader.SpawnReader();
+ 
+         let buffer = "";
+@@ -227,7 +227,7 @@ const TaskService = new Lang.Class({
+                 break;
+         }
+ 
+-        let shellProc = Gio.Subprocess.new(['task', status, 'projects'], Gio.SubprocessFlags.STDOUT_PIPE);
++        let shellProc = Gio.Subprocess.new(['@task@', status, 'projects'], Gio.SubprocessFlags.STDOUT_PIPE);
+ 
+         shellProc.wait_async(null, function(obj, result){
+             let shellProcExited = true;
+@@ -274,7 +274,7 @@ const TaskService = new Lang.Class({
+             return;
+         }
+ 
+-        let shellProc = Gio.Subprocess.new(['task', taskID.toString(), 'done'], Gio.SubprocessFlags.STDOUT_PIPE);
++        let shellProc = Gio.Subprocess.new(['@task@', taskID.toString(), 'done'], Gio.SubprocessFlags.STDOUT_PIPE);
+ 
+         shellProc.wait_async(null, function(obj, result){
+             let shellProcExited = true;
+@@ -307,7 +307,7 @@ const TaskService = new Lang.Class({
+             return;
+         }
+ 
+-        let shellProc = Gio.Subprocess.new(['task', 'modify', taskID.toString(), 'status:pending'], Gio.SubprocessFlags.STDOUT_PIPE);
++        let shellProc = Gio.Subprocess.new(['@task@', 'modify', taskID.toString(), 'status:pending'], Gio.SubprocessFlags.STDOUT_PIPE);
+ 
+         shellProc.wait_async(null, function(obj, result){
+             let shellProcExited = true;
+@@ -339,7 +339,7 @@ const TaskService = new Lang.Class({
+         {
+             return;
+         }
+-        let shellProc = Gio.Subprocess.new(['task', taskID.toString(), 'start'], Gio.SubprocessFlags.STDOUT_PIPE);
++        let shellProc = Gio.Subprocess.new(['@task@', taskID.toString(), 'start'], Gio.SubprocessFlags.STDOUT_PIPE);
+         shellProc.wait_async(null, function(obj, result){
+             let shellProcExited = true;
+             shellProc.wait_finish(result);
+@@ -369,7 +369,7 @@ const TaskService = new Lang.Class({
+         {
+             return;
+         }
+-        let shellProc = Gio.Subprocess.new(['task', taskID.toString(), 'stop'], Gio.SubprocessFlags.STDOUT_PIPE);
++        let shellProc = Gio.Subprocess.new(['@task@', taskID.toString(), 'stop'], Gio.SubprocessFlags.STDOUT_PIPE);
+         shellProc.wait_async(null, function(obj, result){
+             let shellProcExited = true;
+             shellProc.wait_finish(result);
+@@ -468,7 +468,7 @@ const TaskService = new Lang.Class({
+ 
+         try
+         {
+-            shellProc = Gio.Subprocess.new(['task', 'sync'], Gio.SubprocessFlags.STDOUT_PIPE);
++            shellProc = Gio.Subprocess.new(['@task@', 'sync'], Gio.SubprocessFlags.STDOUT_PIPE);
+         }
+         catch(err)
+         {
diff --git a/pkgs/desktops/gnome-3/misc/geary/default.nix b/pkgs/desktops/gnome-3/misc/geary/default.nix
index 6243d1b1d5f1..a912fb1c98b2 100644
--- a/pkgs/desktops/gnome-3/misc/geary/default.nix
+++ b/pkgs/desktops/gnome-3/misc/geary/default.nix
@@ -8,11 +8,11 @@ let
   majorVersion = "0.12";
 in
 stdenv.mkDerivation rec {
-  name = "geary-${majorVersion}.0";
+  name = "geary-${majorVersion}.1";
 
   src = fetchurl {
     url = "mirror://gnome/sources/geary/${majorVersion}/${name}.tar.xz";
-    sha256 = "0ii4qaqfqx90kvqwg0g9jahygkir4mb03ja55fa55yyx6cq0kwff";
+    sha256 = "12hbpd5j3rb122nrsqmgsg31x82xl0ksm0nmsl614v1dd7crqnh6";
   };
 
   propagatedUserEnvPkgs = [ gnome3.gnome_themes_standard ];
diff --git a/pkgs/desktops/mate/atril/default.nix b/pkgs/desktops/mate/atril/default.nix
index ab00cdce6714..c6607dad2902 100644
--- a/pkgs/desktops/mate/atril/default.nix
+++ b/pkgs/desktops/mate/atril/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libxml2, libsecret, poppler, itstool, caja, mate-desktop, hicolor_icon_theme, wrapGAppsHook }:
+{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libxml2, libsecret, poppler, itstool, hicolor_icon_theme, mate, wrapGAppsHook }:
 
 stdenv.mkDerivation rec {
   name = "atril-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.19";
-  minor-ver = "0";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "0v829yvr738y5s2knyvimcgqv351qzb0rpw5il19qc27rbzyri1r";
+    url = "https://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "1639jxcdhcn5wvb4gj9xncdj5d5c3rnyydwwsgqj66cmfmb53l1n";
   };
 
   nativeBuildInputs = [
@@ -23,8 +21,8 @@ stdenv.mkDerivation rec {
     libsecret
     libxml2
     poppler
-    caja
-    mate-desktop
+    mate.caja
+    mate.mate-desktop
     hicolor_icon_theme
   ];
   
diff --git a/pkgs/desktops/mate/caja-dropbox/default.nix b/pkgs/desktops/mate/caja-dropbox/default.nix
index da5200eb3b32..f84fe2fef2eb 100644
--- a/pkgs/desktops/mate/caja-dropbox/default.nix
+++ b/pkgs/desktops/mate/caja-dropbox/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, gtk3, caja, pythonPackages }:
+{ stdenv, fetchurl, pkgconfig, gtk3, mate, pythonPackages }:
 
 stdenv.mkDerivation rec {
   name = "caja-dropbox-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "0";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "18wd8abjaxa68n1yjmvh9az1m8lqa2wing73xdymz0d5gmxmk25g";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0xjqcfi5n6hsfyw77blplkn30as0slkfzngxid1n6z7jz5yjq7vj";
   };
 
   nativeBuildInputs = [
@@ -17,7 +15,7 @@ stdenv.mkDerivation rec {
 
   buildInputs = [
     gtk3
-    caja
+    mate.caja
     pythonPackages.python
     pythonPackages.pygtk
     pythonPackages.docutils
diff --git a/pkgs/desktops/mate/caja-extensions/default.nix b/pkgs/desktops/mate/caja-extensions/default.nix
index 9bd86d962ecb..1aef8d3d184f 100644
--- a/pkgs/desktops/mate/caja-extensions/default.nix
+++ b/pkgs/desktops/mate/caja-extensions/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, gtk3, dbus_glib, gupnp, caja, mate-desktop, imagemagick, wrapGAppsHook }:
+{ stdenv, fetchurl, pkgconfig, intltool, gtk3, dbus_glib, gupnp, mate, imagemagick, wrapGAppsHook }:
 
 stdenv.mkDerivation rec {
   name = "caja-extensions-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "2";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "065j3dyk7zp35rfvxxsdglx30i3xrma4d4saf7mn1rn1akdfgaba";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "1abi7s31mx7v8x0f747bmb3s8hrv8fv007pflv2n545yvn0m1dpj";
   };
 
   nativeBuildInputs = [
@@ -21,8 +19,8 @@ stdenv.mkDerivation rec {
     gtk3
     dbus_glib
     gupnp
-    caja
-    mate-desktop
+    mate.caja
+    mate.mate-desktop
     imagemagick
   ];
 
diff --git a/pkgs/desktops/mate/caja/default.nix b/pkgs/desktops/mate/caja/default.nix
index 3c872e72091f..a80f89feff29 100644
--- a/pkgs/desktops/mate/caja/default.nix
+++ b/pkgs/desktops/mate/caja/default.nix
@@ -2,13 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "caja-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "5";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "1ild2bslvnvxvl5q2xc1sa8bz1lyr4q4ksw3bwxrj0ymc16h7p50";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "05shyqqapqbz4w0gbhx0i3kj6xg7rcj80hkaq7wf5pyj91wmkxqg";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/desktops/mate/default.nix b/pkgs/desktops/mate/default.nix
index 0c495fd190e5..7441a8f73ae7 100644
--- a/pkgs/desktops/mate/default.nix
+++ b/pkgs/desktops/mate/default.nix
@@ -5,6 +5,9 @@ let
 
   self = rec {
 
+    getRelease = version:
+      pkgs.stdenv.lib.concatStringsSep "." (pkgs.stdenv.lib.take 2 (pkgs.stdenv.lib.splitString "." version));
+  
     atril = callPackage ./atril { };
     caja = callPackage ./caja { };
     caja-dropbox = callPackage ./caja-dropbox { };
@@ -82,7 +85,7 @@ let
       mate-system-monitor
       mate-terminal
       mate-user-guide
-      #mate-user-share
+      # mate-user-share
       mate-utils
       mozo
       pluma
diff --git a/pkgs/desktops/mate/engrampa/default.nix b/pkgs/desktops/mate/engrampa/default.nix
index b6b60fa24380..8e46102cf5a6 100644
--- a/pkgs/desktops/mate/engrampa/default.nix
+++ b/pkgs/desktops/mate/engrampa/default.nix
@@ -2,13 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "engrampa-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "3";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "1ms6kz8k86hsj9zk5w3087l749022y0j5ba2s9hz8ah6gfx0mvn5";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "1pk053i14a0r5s9qkipwnp4qjg76b763203z64ymnpkslrrarnnm";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/desktops/mate/eom/default.nix b/pkgs/desktops/mate/eom/default.nix
index e4d52183ab40..c3af73282e5c 100644
--- a/pkgs/desktops/mate/eom/default.nix
+++ b/pkgs/desktops/mate/eom/default.nix
@@ -2,13 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "eom-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "3";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "1zr85ilv0f4x8iky002qvh00qhsq1vsfm5z1954gf31hi57z2j25";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0320ph6cyh0m4cfyvky10j9prk2hry6rpm4jzgcn7ig03dnj4y0s";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/desktops/mate/libmatekbd/default.nix b/pkgs/desktops/mate/libmatekbd/default.nix
index a02f605b470c..209edf1f363b 100644
--- a/pkgs/desktops/mate/libmatekbd/default.nix
+++ b/pkgs/desktops/mate/libmatekbd/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libxklavier }:
+{ stdenv, fetchurl, pkgconfig, intltool, gtk3, mate, libxklavier }:
 
 stdenv.mkDerivation rec {
   name = "libmatekbd-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "2";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "030bl18qbjm7l92bp1bhs7v82bp8j3mv7c1j1a4gd89iz4611pq3";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "1n2zphb3g6ai54nfr0r9s06vn3bmm361xpjga88hmq947fvbpx19";
   };
 
   nativeBuildInputs = [ pkgconfig intltool ];
diff --git a/pkgs/desktops/mate/libmatemixer/default.nix b/pkgs/desktops/mate/libmatemixer/default.nix
index 20cf71c7554d..10a690546f76 100644
--- a/pkgs/desktops/mate/libmatemixer/default.nix
+++ b/pkgs/desktops/mate/libmatemixer/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, pkgconfig, intltool, glib
+{ stdenv, fetchurl, pkgconfig, intltool, glib, mate
 , alsaSupport ? stdenv.isLinux, alsaLib
 , pulseaudioSupport ? stdenv.config.pulseaudio or true, libpulseaudio
 , ossSupport ? false
@@ -6,13 +6,11 @@
 
 stdenv.mkDerivation rec {
   name = "libmatemixer-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "0";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "09vyxnlnalws318gsafdfi5c6jwpp92pbafn1ddlqqds23ihk4mr";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0jpfaqbspn2mjv6ysgzdmzhb07gx61yiiiwmrw94qymld2igrzb5";
   };
 
   nativeBuildInputs = [ pkgconfig intltool ];
diff --git a/pkgs/desktops/mate/libmateweather/default.nix b/pkgs/desktops/mate/libmateweather/default.nix
index 3ddbb8f6a02a..7efad3a5e3ae 100644
--- a/pkgs/desktops/mate/libmateweather/default.nix
+++ b/pkgs/desktops/mate/libmateweather/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libsoup, tzdata }:
+{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libsoup, tzdata, mate }:
 
 stdenv.mkDerivation rec {
   name = "libmateweather-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "2";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "1q3rvmm533cgiif9hbdp6a92dm727g5i2dv5d8krfa0nl36i468y";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "1c8mvydb0h7z3zn0qahwlp15z5wl6nrv24q4z7ldhm340jnxsvh7";
   };
 
   nativeBuildInputs = [ pkgconfig intltool ];
diff --git a/pkgs/desktops/mate/marco/default.nix b/pkgs/desktops/mate/marco/default.nix
index 522485fd22c2..9a926b78c3d7 100644
--- a/pkgs/desktops/mate/marco/default.nix
+++ b/pkgs/desktops/mate/marco/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, itstool, libxml2, libcanberra_gtk3, libgtop, gnome2, gnome3, wrapGAppsHook }:
+{ stdenv, fetchurl, pkgconfig, intltool, itstool, libxml2, libcanberra_gtk3, libgtop, gnome2, gnome3, mate, wrapGAppsHook }:
 
 stdenv.mkDerivation rec {
   name = "marco-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "2";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "173g9mrnkcgjc6a1maln13iqdl0cqcnca8ydr8767xrn9dlkx9f5";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "07asf8i15ih6ajkp5yapk720qyssi2cinxwg2z5q5j9m6mxax6lr";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/desktops/mate/mate-applets/default.nix b/pkgs/desktops/mate/mate-applets/default.nix
index ba5ef927fb6f..f56d594303c9 100644
--- a/pkgs/desktops/mate/mate-applets/default.nix
+++ b/pkgs/desktops/mate/mate-applets/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, itstool, gnome3, libwnck3, libgtop, libxml2, libnotify, dbus_glib, polkit, upower, wirelesstools, libmateweather, mate-panel, pythonPackages, hicolor_icon_theme, wrapGAppsHook }:
+{ stdenv, fetchurl, pkgconfig, intltool, itstool, gnome3, libwnck3, libgtop, libxml2, libnotify, dbus_glib, polkit, upower, wirelesstools, mate, hicolor_icon_theme, wrapGAppsHook }:
 
 stdenv.mkDerivation rec {
   name = "mate-applets-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "2";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "045cl62nnfsl14vnfydwqjssdakgdrahh5h0xiz5afmdcbq6cqgw";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "1jmhswfcbawp9ax5p5h2dj8pyajadjdyxa0ac7ldvh7viv8qy52s";
   };
 
   nativeBuildInputs = [
@@ -26,14 +24,11 @@ stdenv.mkDerivation rec {
     libgtop
     libxml2
     libnotify
-    dbus_glib
     polkit
     upower
     wirelesstools
-    libmateweather
-    mate-panel
-    pythonPackages.python
-    pythonPackages.pygobject3
+    mate.libmateweather
+    mate.mate-panel
     hicolor_icon_theme
   ];
 
diff --git a/pkgs/desktops/mate/mate-backgrounds/default.nix b/pkgs/desktops/mate/mate-backgrounds/default.nix
index 6ce78491d037..79a322ccb0a5 100644
--- a/pkgs/desktops/mate/mate-backgrounds/default.nix
+++ b/pkgs/desktops/mate/mate-backgrounds/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, intltool }:
+{ stdenv, fetchurl, intltool, mate }:
 
 stdenv.mkDerivation rec {
   name = "mate-backgrounds-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "0";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "06q8ksjisijps2wn959arywsimhzd3j35mqkr048c26ck24d60zi";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0pcnjcw00y8hf2bwfrb5sbk2511cbg4fr8vgvgqswcwjp9y15cjp";
   };
 
   nativeBuildInputs = [ intltool ];
diff --git a/pkgs/desktops/mate/mate-calc/default.nix b/pkgs/desktops/mate/mate-calc/default.nix
index b00bcc27ac51..efe8adae678e 100644
--- a/pkgs/desktops/mate/mate-calc/default.nix
+++ b/pkgs/desktops/mate/mate-calc/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtk3, libxml2, wrapGAppsHook }:
+{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtk3, libxml2, mate, wrapGAppsHook }:
 
 stdenv.mkDerivation rec {
   name = "mate-calc-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "1";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "1h6kr9qb1kaw8jvfm7xmqm1wqnxsw2iwha5vl38b986x4zm2b712";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "03cma6b00chd4026pbnh5i0ckpl8b1l7i1ppvcmbfbx0s3vpbc73";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/desktops/mate/mate-common/default.nix b/pkgs/desktops/mate/mate-common/default.nix
index a433104b1fa7..63adb1849dac 100644
--- a/pkgs/desktops/mate/mate-common/default.nix
+++ b/pkgs/desktops/mate/mate-common/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl }:
+{ stdenv, fetchurl, mate }:
 
 stdenv.mkDerivation rec {
   name = "mate-common-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "0";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "1005laf3z1h8qczm7pmwr40r842665cv6ykhjg7r93vldra48z6p";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0h8s2qhc6f5flslx05cd3xxg243c67vv03spjiag14p8kqqrqvb1";
   };
 
   meta = {
diff --git a/pkgs/desktops/mate/mate-control-center/default.nix b/pkgs/desktops/mate/mate-control-center/default.nix
index 3b04d4b48aa1..e9b789bdc4e9 100644
--- a/pkgs/desktops/mate/mate-control-center/default.nix
+++ b/pkgs/desktops/mate/mate-control-center/default.nix
@@ -5,13 +5,11 @@
 
 stdenv.mkDerivation rec {
   name = "mate-control-center-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "2";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "0flnn0h8f5aqyccwrlv7qxchvr3kqmlfdga6wq28d55zkpv5m7dl";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0qq3ln40w7lxa7qvbvbsgdq1c5ybzqw3bw2x4z6y6brl4c77sbh7";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/desktops/mate/mate-desktop/default.nix b/pkgs/desktops/mate/mate-desktop/default.nix
index 039c3732d11d..56c0ae4632ca 100644
--- a/pkgs/desktops/mate/mate-desktop/default.nix
+++ b/pkgs/desktops/mate/mate-desktop/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, gnome3, wrapGAppsHook }:
+{ stdenv, fetchurl, pkgconfig, intltool, gnome3, mate, wrapGAppsHook }:
 
 stdenv.mkDerivation rec {
   name = "mate-desktop-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "0";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "12iv2y4dan962fs7vkkxbjkp77pbvjnwfa43ggr0zkdsc3ydjbbg";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0y5172sbj6f4dvimf4pmz74b9cfidbpmnwwb9f6vlc6fa0kp5l1n";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/desktops/mate/mate-icon-theme-faenza/default.nix b/pkgs/desktops/mate/mate-icon-theme-faenza/default.nix
index 05edfc1dd6d4..6e1f9778e313 100644
--- a/pkgs/desktops/mate/mate-icon-theme-faenza/default.nix
+++ b/pkgs/desktops/mate/mate-icon-theme-faenza/default.nix
@@ -2,13 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "mate-icon-theme-faenza-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "1";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "0vc3wg9l5yrxm0xmligz4lw2g3nqj1dz8fwv90xvym8pbjds2849";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "000vr9cnbl2qlysf2gyg1lsjirqdzmwrnh6d3hyrsfc0r2vh4wna";
   };
 
   nativeBuildInputs = [ autoreconfHook ];
diff --git a/pkgs/desktops/mate/mate-icon-theme/default.nix b/pkgs/desktops/mate/mate-icon-theme/default.nix
index b1c5e82da995..a42116a63af5 100644
--- a/pkgs/desktops/mate/mate-icon-theme/default.nix
+++ b/pkgs/desktops/mate/mate-icon-theme/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, iconnamingutils, librsvg, hicolor_icon_theme, gtk3 }:
+{ stdenv, fetchurl, pkgconfig, intltool, iconnamingutils, librsvg, hicolor_icon_theme, gtk3, mate }:
 
 stdenv.mkDerivation rec {
   name = "mate-icon-theme-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "2";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "0si3li3kza7s45zhasjvqn5f85zpkn0x8i4kq1dlnqvjjqzkg4ch";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0lmsmsamgg1s6qrk19qwa76ld7x1k3pwhy4vs1ixn1as4iaaddk5";
   };
 
   nativeBuildInputs = [ pkgconfig intltool iconnamingutils ];
diff --git a/pkgs/desktops/mate/mate-indicator-applet/default.nix b/pkgs/desktops/mate/mate-indicator-applet/default.nix
index 7d863a929e7a..4ff636c3c734 100644
--- a/pkgs/desktops/mate/mate-indicator-applet/default.nix
+++ b/pkgs/desktops/mate/mate-indicator-applet/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libindicator-gtk3, mate-panel, hicolor_icon_theme, wrapGAppsHook }:
+{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libindicator-gtk3, mate, hicolor_icon_theme, wrapGAppsHook }:
 
 stdenv.mkDerivation rec {
   name = "mate-indicator-applet-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "1";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "1h77f1gbz1a8l9xyq5fk75bs58mcwx6pbk6db33v0v1mwq6cidiv";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "1fc6j5dnxghpgz8xbf5p8j2jprk97q4q3ajkh6sg5l71gqlnampg";
   };
 
   nativeBuildInputs = [
@@ -20,7 +18,7 @@ stdenv.mkDerivation rec {
   buildInputs = [
     gtk3
     libindicator-gtk3
-    mate-panel
+    mate.mate-panel
     hicolor_icon_theme
   ];
 
diff --git a/pkgs/desktops/mate/mate-media/default.nix b/pkgs/desktops/mate/mate-media/default.nix
index 0586a2e54ebf..f4ee94b4bd37 100644
--- a/pkgs/desktops/mate/mate-media/default.nix
+++ b/pkgs/desktops/mate/mate-media/default.nix
@@ -2,13 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "mate-media-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "2";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "07v37jvrl8m5rhlasrdziwy15gcpn561d7zn5q1yfla2d5ddy0b1";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "09vbw7nc91ljnxm5sbrch0w7zzn2i6qjb1b50q402niwr5b0zicr";
   };
 
   buildInputs = [
diff --git a/pkgs/desktops/mate/mate-menus/default.nix b/pkgs/desktops/mate/mate-menus/default.nix
index 6f4bf48c672a..51263f0d74e7 100644
--- a/pkgs/desktops/mate/mate-menus/default.nix
+++ b/pkgs/desktops/mate/mate-menus/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, glib, gobjectIntrospection, python }:
+{ stdenv, fetchurl, pkgconfig, intltool, glib, gobjectIntrospection, python, mate }:
 
 stdenv.mkDerivation rec {
   name = "mate-menus-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "1";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "03fwv0fvg073dmdbrcbpwjhxpj98aqna804m9nqybhvj3cfyhaz6";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "1w1k6kdabmabhpqvkizk1si6ri4rmspsbj0252ki834ml0dxpnhg";
   };
 
   nativeBuildInputs = [ pkgconfig intltool ];
diff --git a/pkgs/desktops/mate/mate-netbook/default.nix b/pkgs/desktops/mate/mate-netbook/default.nix
index 0a2a0e472020..508e1d359c9a 100644
--- a/pkgs/desktops/mate/mate-netbook/default.nix
+++ b/pkgs/desktops/mate/mate-netbook/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libwnck3, libfakekey, libXtst, mate-panel, wrapGAppsHook }:
+{ stdenv, fetchurl, pkgconfig, intltool, gtk3, libwnck3, libfakekey, libXtst, mate, wrapGAppsHook }:
 
 stdenv.mkDerivation rec {
   name = "mate-netbook-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "2";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "0xy5mhkg0xfgyr7gnnjrfzqhmdnhyqscrl2h496p06cflknm17vb";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "1w92kny1fnlwbq4b8y50n5s1vsvvl4xrvspsp9lqfxyz3jxiwbrz";
   };
 
   nativeBuildInputs = [
@@ -22,7 +20,7 @@ stdenv.mkDerivation rec {
     libwnck3
     libfakekey
     libXtst
-    mate-panel
+    mate.mate-panel
   ];
 
   meta = with stdenv.lib; {
diff --git a/pkgs/desktops/mate/mate-notification-daemon/default.nix b/pkgs/desktops/mate/mate-notification-daemon/default.nix
index c5e53cf57914..53b441a293a6 100644
--- a/pkgs/desktops/mate/mate-notification-daemon/default.nix
+++ b/pkgs/desktops/mate/mate-notification-daemon/default.nix
@@ -1,15 +1,13 @@
 { stdenv, fetchurl, pkgconfig, intltool, dbus_glib, libcanberra_gtk3,
-  libnotify, libwnck3, gnome3, wrapGAppsHook }:
+  libnotify, libwnck3, gnome3, mate, wrapGAppsHook }:
 
 stdenv.mkDerivation rec {
   name = "mate-notification-daemon-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "1";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "102nmd6mnf1fwvw11ggdlgcblq612nd4aar3gdjzqn1fw37591i5";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0dq457npzid20yfwigdh8gfqgf5wv8p6jhbxfnzybam9xidlqc5f";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/desktops/mate/mate-panel/default.nix b/pkgs/desktops/mate/mate-panel/default.nix
index ec934b1fc637..b05a9a68af04 100644
--- a/pkgs/desktops/mate/mate-panel/default.nix
+++ b/pkgs/desktops/mate/mate-panel/default.nix
@@ -2,13 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "mate-panel-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "7";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "1m0fxyzbvg239dddmz3ksd8871lhkd7n3fxvdgdf4hv9rlvm1klv";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0cz1pfwvsmrjcd0wa83cid9yjcygla6rhigyr7f75d75kiknlcm7";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/desktops/mate/mate-polkit/default.nix b/pkgs/desktops/mate/mate-polkit/default.nix
index 94fb5ef43e8a..3db773af9fc5 100644
--- a/pkgs/desktops/mate/mate-polkit/default.nix
+++ b/pkgs/desktops/mate/mate-polkit/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, gtk3, gobjectIntrospection, libappindicator-gtk3, libindicator-gtk3, polkit }:
+{ stdenv, fetchurl, pkgconfig, intltool, gtk3, gobjectIntrospection, libappindicator-gtk3, libindicator-gtk3, polkit, mate }:
 
 stdenv.mkDerivation rec {
   name = "mate-polkit-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "2";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "01mxl7wj1501d3clrwlwa54970vpkahp5968xpaxwfb2zbnqgjbd";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "00c1rmi31gv1a3lk7smjp489kd3wrj0d6npagnb8p1rz0g88ha94";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/desktops/mate/mate-power-manager/default.nix b/pkgs/desktops/mate/mate-power-manager/default.nix
index 8b60226d9590..df38485fbc75 100644
--- a/pkgs/desktops/mate/mate-power-manager/default.nix
+++ b/pkgs/desktops/mate/mate-power-manager/default.nix
@@ -2,13 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "mate-power-manager-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "1";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "1sybc4j9bdnb2axmvpbbm85ixhdfa1k1yh769gns56ix0ryd9nr5";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "038c2q5kqvqmkp1i93p4pp9x8p6a9i7lyn3nv522mq06qsbynbww";
   };
 
   buildInputs = [
@@ -21,7 +19,6 @@ stdenv.mkDerivation rec {
      libnotify
      dbus_glib
      upower
-
      mate.mate-panel
   ];
 
diff --git a/pkgs/desktops/mate/mate-screensaver/default.nix b/pkgs/desktops/mate/mate-screensaver/default.nix
index dbaebb4c7be4..e1ae6b4ae1dc 100644
--- a/pkgs/desktops/mate/mate-screensaver/default.nix
+++ b/pkgs/desktops/mate/mate-screensaver/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, gtk3, dbus_glib, libXScrnSaver, libnotify, pam, systemd, mate-desktop, mate-menus, wrapGAppsHook }:
+{ stdenv, fetchurl, pkgconfig, intltool, gtk3, dbus_glib, libXScrnSaver, libnotify, pam, systemd, mate, wrapGAppsHook }:
 
 stdenv.mkDerivation rec {
   name = "mate-screensaver-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "2";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "03za7ssww095i49braaq0di5ir9g6wxh1n5hfgy6b3w9nb0j1y2p";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "1698608m6kf4dn91xdwy7l809yagz02h1k594smj75wvnhr7x4k9";
   };
 
   nativeBuildInputs = [
@@ -24,8 +22,8 @@ stdenv.mkDerivation rec {
     libnotify
     pam
     systemd
-    mate-desktop
-    mate-menus
+    mate.mate-desktop
+    mate.mate-menus
   ];
 
   configureFlags = "--without-console-kit";
diff --git a/pkgs/desktops/mate/mate-sensors-applet/default.nix b/pkgs/desktops/mate/mate-sensors-applet/default.nix
index ed98ffaa645b..130db2420ef1 100644
--- a/pkgs/desktops/mate/mate-sensors-applet/default.nix
+++ b/pkgs/desktops/mate/mate-sensors-applet/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtk3, libxml2, libxslt, libatasmart, libnotify, dbus_glib, lm_sensors, mate-panel, hicolor_icon_theme, wrapGAppsHook }:
+{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtk3, libxml2, libxslt, libatasmart, libnotify, dbus_glib, lm_sensors, mate, hicolor_icon_theme, wrapGAppsHook }:
 
 stdenv.mkDerivation rec {
   name = "mate-sensors-applet-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "3";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "1nm68rhp73kgvs7wwsgs5zbvq3lzaanl5s5nnn28saiknjbz1mcx";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "1yj8zr9w0a1h4bpd27w7ssg97vnrz7yr10jqhx67yyb900ccr3ik";
   };
 
   nativeBuildInputs = [
@@ -27,7 +25,7 @@ stdenv.mkDerivation rec {
     libnotify
     dbus_glib
     lm_sensors
-    mate-panel
+    mate.mate-panel
     hicolor_icon_theme
   ];
 
diff --git a/pkgs/desktops/mate/mate-session-manager/default.nix b/pkgs/desktops/mate/mate-session-manager/default.nix
index f15a78120cba..d154b80263c6 100644
--- a/pkgs/desktops/mate/mate-session-manager/default.nix
+++ b/pkgs/desktops/mate/mate-session-manager/default.nix
@@ -1,17 +1,15 @@
 { stdenv, fetchurl, pkgconfig, intltool, xtrans, dbus_glib, systemd,
-  libSM, libXtst, gtk3, mate-desktop, hicolor_icon_theme,
+  libSM, libXtst, gtk3, hicolor_icon_theme, mate,
   wrapGAppsHook
 }:
 
 stdenv.mkDerivation rec {
   name = "mate-session-manager-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "2";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "11ii7azl8rn9mfymcmcbpysyd12vrxp4s8l3l6yk4mwlr3gvzxj0";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0vzr6y9shw4zb3ddfrj0nn7yqggpq9sv6h33p0xxdx71ydl40p2g";
   };
 
   nativeBuildInputs = [
@@ -27,7 +25,7 @@ stdenv.mkDerivation rec {
     libSM
     libXtst
     gtk3
-    mate-desktop
+    mate.mate-desktop
     hicolor_icon_theme
   ];
 
diff --git a/pkgs/desktops/mate/mate-settings-daemon/default.nix b/pkgs/desktops/mate/mate-settings-daemon/default.nix
index 86eec907651c..dc1272115b8e 100644
--- a/pkgs/desktops/mate/mate-settings-daemon/default.nix
+++ b/pkgs/desktops/mate/mate-settings-daemon/default.nix
@@ -4,13 +4,11 @@
 
 stdenv.mkDerivation rec {
   name = "mate-settings-daemon-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "2";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "0v2kdzfmfqq0avlrxnxysmkawy83g7sanmyhivisi5vg4rzsr0a4";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0p4fr2sgkjcjsrmkdy579xmk20dl0sa6az40rzvm6fb2w6693sf5";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/desktops/mate/mate-system-monitor/default.nix b/pkgs/desktops/mate/mate-system-monitor/default.nix
index 1378cc7f3ba5..8c67044a4220 100644
--- a/pkgs/desktops/mate/mate-system-monitor/default.nix
+++ b/pkgs/desktops/mate/mate-system-monitor/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtkmm3, libxml2, libgtop, libwnck3, librsvg, systemd, wrapGAppsHook }:
+{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtkmm3, libxml2, libgtop, libwnck3, librsvg, systemd, mate, wrapGAppsHook }:
 
 stdenv.mkDerivation rec {
   name = "mate-system-monitor-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "1";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "1xhz7d9045xfh431rn27kh1sd1clbzkfrw1zkjgfnpad6v3aaaks";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "059aryj0gz4sic719nsmckhkjl4yhqxmyplvh78clf5khh4apwn5";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/desktops/mate/mate-terminal/default.nix b/pkgs/desktops/mate/mate-terminal/default.nix
index 590ae7c7f813..b90211ae0611 100644
--- a/pkgs/desktops/mate/mate-terminal/default.nix
+++ b/pkgs/desktops/mate/mate-terminal/default.nix
@@ -2,13 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "mate-terminal-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "2";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "053jdcjalywcq4fvqlb145sfp5hmnd6yyk9ckzvkh6fl3gyp54gc";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "03366hs7mxazn6m6y53ppkb1din4jywljg0lx8zw101qg6car0az";
   };
 
   buildInputs = [
diff --git a/pkgs/desktops/mate/mate-themes/default.nix b/pkgs/desktops/mate/mate-themes/default.nix
index c29c0560cd1d..c68b8b7d9bd8 100644
--- a/pkgs/desktops/mate/mate-themes/default.nix
+++ b/pkgs/desktops/mate/mate-themes/default.nix
@@ -3,20 +3,11 @@
 
 stdenv.mkDerivation rec {
   name = "mate-themes-${version}";
-  version = "${major-ver}.${minor-ver}";
-  # There is no 3.24 release.
-  major-ver = if stdenv.lib.versionOlder gnome3.version "3.23" then gnome3.version else "3.22";
-  minor-ver = {
-    "3.20" = "23";
-    "3.22" = "14";
-  }."${major-ver}";
+  version = "3.22.15";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/themes/${major-ver}/${name}.tar.xz";
-    sha256 = {
-      "3.20" = "0xmcm1kmkhbakhwy5vvx3gll5v2gvihwnbf0gyjf75fys6h3818g";
-      "3.22" = "09fqvlnmrvc73arl7jv9ygkxi46lw7c1q8qra6w3ap7x83f9zdak";
-    }."${major-ver}";
+    url = "http://pub.mate-desktop.org/releases/themes/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0cmlbj6vlkavdirc5xnsgwmy0m11bj9yrbv1dkq46n1s23rvv6wg";
   };
 
   nativeBuildInputs = [ pkgconfig intltool ];
diff --git a/pkgs/desktops/mate/mate-user-guide/default.nix b/pkgs/desktops/mate/mate-user-guide/default.nix
index ce8029fb2152..55cd82eecdc7 100644
--- a/pkgs/desktops/mate/mate-user-guide/default.nix
+++ b/pkgs/desktops/mate/mate-user-guide/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, intltool, itstool, libxml2, yelp }:
+{ stdenv, fetchurl, intltool, itstool, libxml2, yelp, mate }:
 
 stdenv.mkDerivation rec {
   name = "mate-user-guide-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "0";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "0f3b46r9a3cywm7rpj08xlkfnlfr9db58xfcpix8i33qp50fxqmb";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "1n1rlvymz8k7vvjmd9qkv26wz3770w1ywsa41kbisbfp9x7mr0w2";
   };
 
   nativeBuildInputs = [ itstool intltool libxml2 ];
diff --git a/pkgs/desktops/mate/mate-user-share/default.nix b/pkgs/desktops/mate/mate-user-share/default.nix
index afacad527782..f5393cad0b88 100644
--- a/pkgs/desktops/mate/mate-user-share/default.nix
+++ b/pkgs/desktops/mate/mate-user-share/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtk3, dbus_glib, libnotify, libxml2, libcanberra_gtk3, caja, mod_dnssd, apacheHttpd, hicolor_icon_theme, wrapGAppsHook }:
+{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtk3, dbus_glib, libnotify, libxml2, libcanberra_gtk3, mod_dnssd, apacheHttpd, hicolor_icon_theme, mate, wrapGAppsHook }:
 
 stdenv.mkDerivation rec {
   name = "mate-user-share-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "0";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "0w7r7jmm12n41hcxj1pfk3f0xy69cddx7ga490x191rdpcb3ry1n";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0lv5ndjk2br4w7cw8gsgj7aa2iadxv7m4wii4c49pajmd950iff2";
   };
 
   nativeBuildInputs = [
@@ -24,7 +22,7 @@ stdenv.mkDerivation rec {
     libnotify
     libcanberra_gtk3
     libxml2
-    caja
+    mate.caja
     hicolor_icon_theme
     # Should mod_dnssd and apacheHttpd be runtime dependencies?
     # In gnome-user-share they are not.
diff --git a/pkgs/desktops/mate/mate-utils/default.nix b/pkgs/desktops/mate/mate-utils/default.nix
index 281fef42e612..946dc3efd253 100644
--- a/pkgs/desktops/mate/mate-utils/default.nix
+++ b/pkgs/desktops/mate/mate-utils/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtk3, libxml2, libgtop, libcanberra_gtk3, mate-panel, hicolor_icon_theme, wrapGAppsHook }:
+{ stdenv, fetchurl, pkgconfig, intltool, itstool, gtk3, libxml2, libgtop, libcanberra_gtk3, mate, hicolor_icon_theme, wrapGAppsHook }:
 
 stdenv.mkDerivation rec {
   name = "mate-utils-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "3";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "1nw8rcq3x67v73cmy44zz6r2ikz46wsx834qzkbq4i2ac96kdkfz";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "10a6k8gi7cajlkbj1jbvk3s633hw58lan3rc85v8jlrkwm7wmhpl";
   };
 
   nativeBuildInputs = [
@@ -23,7 +21,7 @@ stdenv.mkDerivation rec {
     libgtop
     libcanberra_gtk3
     libxml2
-    mate-panel
+    mate.mate-panel
     hicolor_icon_theme
   ];
 
diff --git a/pkgs/desktops/mate/mozo/default.nix b/pkgs/desktops/mate/mozo/default.nix
index b376736c473d..e98d16d774e2 100644
--- a/pkgs/desktops/mate/mozo/default.nix
+++ b/pkgs/desktops/mate/mozo/default.nix
@@ -1,17 +1,15 @@
-{ stdenv, fetchurl, pkgconfig, intltool, mate-menus, pythonPackages }:
+{ stdenv, fetchurl, pkgconfig, intltool, mate, pythonPackages }:
 
 stdenv.mkDerivation rec {
   name = "mozo-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "0";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "04yn9bw64q5a5kvpmkb7rb3mlp11pmnvkbphficsgb0368fj895b";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "1108avdappfjadd46ld7clhh5m9f4b5khl5y33l377m8ky9dy87g";
   };
   
-  pythonPath = [ mate-menus pythonPackages.pygobject3 ];
+  pythonPath = [ mate.mate-menus pythonPackages.pygobject3 ];
 
   nativeBuildInputs = [ pkgconfig intltool pythonPackages.wrapPython ];
 
diff --git a/pkgs/desktops/mate/pluma/default.nix b/pkgs/desktops/mate/pluma/default.nix
index d6d3d46f7cd6..d951c9f9bbd0 100644
--- a/pkgs/desktops/mate/pluma/default.nix
+++ b/pkgs/desktops/mate/pluma/default.nix
@@ -2,13 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "pluma-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "3";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "1bz2jvjfz761hcvhcbkz8sc4xf0iyixh5w0k7bx69qkwwdc0gxi0";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0w2x270n11rfa321cdlycfhcgncwxqpikjyl3lwmn4vkx8nhgq5f";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/desktops/mate/python-caja/default.nix b/pkgs/desktops/mate/python-caja/default.nix
index 4eb9b72b8b5f..566245c4441d 100644
--- a/pkgs/desktops/mate/python-caja/default.nix
+++ b/pkgs/desktops/mate/python-caja/default.nix
@@ -1,14 +1,12 @@
-{ stdenv, fetchurl, pkgconfig, intltool, gtk3, caja, pythonPackages }:
+{ stdenv, fetchurl, pkgconfig, intltool, gtk3, mate, pythonPackages }:
 
 stdenv.mkDerivation rec {
   name = "python-caja-${version}";
-  version = "${major-ver}.${minor-ver}";
-  major-ver = "1.18";
-  minor-ver = "1";
+  version = "1.20.0";
 
   src = fetchurl {
-    url = "http://pub.mate-desktop.org/releases/${major-ver}/${name}.tar.xz";
-    sha256 = "0n43cvvv29gq31hgrsf9al184cr87c3hzskrh2593rid52kwyz44";
+    url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz";
+    sha256 = "0bcgg3p01zik53l5ns48575yw0k88fyc044yvp9fvwy5jqqg1ykk";
   };
 
   nativeBuildInputs = [
@@ -19,7 +17,7 @@ stdenv.mkDerivation rec {
 
   buildInputs = [
     gtk3
-    caja
+    mate.caja
     pythonPackages.python
     pythonPackages.pygobject3
   ];
diff --git a/pkgs/desktops/mate/update.sh b/pkgs/desktops/mate/update.sh
new file mode 100755
index 000000000000..736bcbd34fc6
--- /dev/null
+++ b/pkgs/desktops/mate/update.sh
@@ -0,0 +1,54 @@
+#!/usr/bin/env nix-shell
+#!nix-shell -i bash -p libarchive curl common-updater-scripts
+
+set -eu -o pipefail
+
+cd "$(dirname "${BASH_SOURCE[0]}")"
+root=../../..
+export NIXPKGS_ALLOW_UNFREE=1
+
+mate_version=1.20
+theme_version=3.22
+materepo=https://pub.mate-desktop.org/releases/${mate_version}
+themerepo=https://pub.mate-desktop.org/releases/themes/${theme_version}
+
+version() {
+    (cd "$root" && nix-instantiate --eval --strict -A "$1.version" | tr -d '"')
+}
+
+update_package() {
+    local p=$1
+    echo $p
+
+    local repo
+    if [ "$p" = "mate-themes" ]; then
+        repo=$themerepo
+    else
+        repo=$materepo
+    fi
+  
+    local p_version_old=$(version mate.$p)
+    local p_versions=$(curl -sS ${repo}/ | sed -rne "s/.*\"$p-([0-9]+\\.[0-9]+\\.[0-9]+)\\.tar\\.xz.*/\\1/p")
+    local p_version=$(echo $p_versions | sed -e 's/ /\n/g' | sort -t. -k 1,1n -k 2,2n -k 3,3n | tail -n1)
+  
+    if [[ "$p_version" = "$p_version_old" ]]; then
+        echo "nothing to do, $p $p_version is current"
+        echo
+        return
+    fi
+
+    # Download package and save hash and file path.
+    local url="$repo/$p-${p_version}.tar.xz"
+    mapfile -t prefetch < <(nix-prefetch-url --print-path "$url")
+    local hash=${prefetch[0]}
+    local path=${prefetch[1]}
+    echo "$p: $p_version_old -> $p_version"
+    (cd "$root" && update-source-version mate.$p "$p_version" "$hash")
+    echo
+}
+
+for d in $(ls -A --indicator-style=none); do
+    if [ -d $d ]; then
+        update_package $d
+    fi
+done
diff --git a/pkgs/desktops/plasma-5/default.nix b/pkgs/desktops/plasma-5/default.nix
index 81f42a2adbe0..f00c4e73a887 100644
--- a/pkgs/desktops/plasma-5/default.nix
+++ b/pkgs/desktops/plasma-5/default.nix
@@ -26,7 +26,7 @@ existing packages here and modify it as necessary.
 
 {
   libsForQt5, lib, fetchurl,
-  gconf,
+  gconf, gsettings_desktop_schemas,
   debug ? false,
 }:
 
@@ -105,7 +105,7 @@ let
       breeze-plymouth = callPackage ./breeze-plymouth {};
       kactivitymanagerd = callPackage ./kactivitymanagerd.nix {};
       kde-cli-tools = callPackage ./kde-cli-tools.nix {};
-      kde-gtk-config = callPackage ./kde-gtk-config {};
+      kde-gtk-config = callPackage ./kde-gtk-config { inherit gsettings_desktop_schemas; };
       kdecoration = callPackage ./kdecoration.nix {};
       kdeplasma-addons = callPackage ./kdeplasma-addons.nix {};
       kgamma5 = callPackage ./kgamma5.nix {};
@@ -135,6 +135,7 @@ let
       powerdevil = callPackage ./powerdevil.nix {};
       sddm-kcm = callPackage ./sddm-kcm.nix {};
       systemsettings = callPackage ./systemsettings.nix {};
+      xdg-desktop-portal-kde = callPackage ./xdg-desktop-portal-kde.nix {};
     };
 in
 lib.makeScope libsForQt5.newScope packages
diff --git a/pkgs/desktops/plasma-5/fetch.sh b/pkgs/desktops/plasma-5/fetch.sh
index 921441c02922..ba1cf9ed9934 100644
--- a/pkgs/desktops/plasma-5/fetch.sh
+++ b/pkgs/desktops/plasma-5/fetch.sh
@@ -1 +1 @@
-WGET_ARGS=( https://download.kde.org/stable/plasma/5.11.5/ -A '*.tar.xz' )
+WGET_ARGS=( https://download.kde.org/stable/plasma/5.12.2/ -A '*.tar.xz' )
diff --git a/pkgs/desktops/plasma-5/kde-gtk-config/default.nix b/pkgs/desktops/plasma-5/kde-gtk-config/default.nix
index 38bab58c829e..f792f3b939f4 100644
--- a/pkgs/desktops/plasma-5/kde-gtk-config/default.nix
+++ b/pkgs/desktops/plasma-5/kde-gtk-config/default.nix
@@ -2,7 +2,7 @@
   mkDerivation,
   extra-cmake-modules,
   glib, gtk2, gtk3, karchive, kcmutils, kconfigwidgets, ki18n, kiconthemes, kio,
-  knewstuff
+  knewstuff, gsettings_desktop_schemas
 }:
 
 mkDerivation {
@@ -10,11 +10,12 @@ mkDerivation {
   nativeBuildInputs = [ extra-cmake-modules ];
   buildInputs = [
     ki18n kio glib gtk2 gtk3 karchive kcmutils kconfigwidgets kiconthemes
-    knewstuff
+    knewstuff gsettings_desktop_schemas
   ];
   patches = [ ./0001-follow-symlinks.patch ];
   cmakeFlags = [
     "-DGTK2_GLIBCONFIG_INCLUDE_DIR=${glib.out}/lib/glib-2.0/include"
     "-DGTK2_GDKCONFIG_INCLUDE_DIR=${gtk2.out}/lib/gtk-2.0/include"
+    "-DGLIB_SCHEMAS_DIR=${gsettings_desktop_schemas.out}/"
   ];
 }
diff --git a/pkgs/desktops/plasma-5/kwin/default.nix b/pkgs/desktops/plasma-5/kwin/default.nix
index 8b8a5fe72ea2..87a25885b40f 100644
--- a/pkgs/desktops/plasma-5/kwin/default.nix
+++ b/pkgs/desktops/plasma-5/kwin/default.nix
@@ -11,7 +11,7 @@
   kcoreaddons, kcrash, kdeclarative, kdecoration, kglobalaccel, ki18n,
   kiconthemes, kidletime, kinit, kio, knewstuff, knotifications, kpackage,
   kscreenlocker, kservice, kwayland, kwidgetsaddons, kwindowsystem, kxmlgui,
-  plasma-framework,
+  plasma-framework, qtsensors, libcap
 }:
 
 mkDerivation {
@@ -21,22 +21,22 @@ mkDerivation {
     epoxy libICE libSM libinput libxkbcommon udev wayland xcb-util-cursor
     xwayland
 
-    qtdeclarative qtmultimedia qtscript qtx11extras
+    qtdeclarative qtmultimedia qtscript qtx11extras qtsensors
 
     breeze-qt5 kactivities kcmutils kcompletion kconfig kconfigwidgets
     kcoreaddons kcrash kdeclarative kdecoration kglobalaccel ki18n kiconthemes
     kidletime kinit kio knewstuff knotifications kpackage kscreenlocker kservice
     kwayland kwidgetsaddons kwindowsystem kxmlgui plasma-framework
+    libcap
   ];
   outputs = [ "bin" "dev" "out" ];
-  patches = copyPathsToStore (lib.readPathsFromFile ./. ./series)
-    ++ [(fetchpatch {
-        name = "cmake-3.10.diff";
-        # included upstream for kwin >= 5.11.95
-        url = "https://github.com/KDE/kwin/commit/cd544890ced4192.diff";
-        sha256 = "0z5nbcg712v10mskb7r9v0jcx5h8q4ixb7fjbb0kicmzsc266yd5";
-    })]
-    ;
+  patches = copyPathsToStore (lib.readPathsFromFile ./. ./series) ++ [
+    # This patch should be removed in 5.12.2
+    (fetchpatch {
+      url = "https://github.com/KDE/kwin/commit/6e5f5d92daab4c60f7bf241d90a91b3bea27acfd.patch";
+      sha256 = "1yq9wjvch46z7qx051s0ws0gyqbqhkvx7xl4pymd97vz8v6gnx4x";
+    })
+  ];
   CXXFLAGS = [
     ''-DNIXPKGS_XWAYLAND=\"${lib.getBin xwayland}/bin/Xwayland\"''
   ];
diff --git a/pkgs/desktops/plasma-5/kwin/no-setcap-install.patch b/pkgs/desktops/plasma-5/kwin/no-setcap-install.patch
new file mode 100644
index 000000000000..80aacacc6ca0
--- /dev/null
+++ b/pkgs/desktops/plasma-5/kwin/no-setcap-install.patch
@@ -0,0 +1,24 @@
+Dont set capabilities on kwin_wayland executable at build time
+
+This is handled by security.wrappers on NixOS
+
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index 48cbcdbfe..93b410ed8 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -674,15 +674,6 @@ if (HAVE_LIBCAP)
+ endif()
+
+ install(TARGETS kwin_wayland         ${INSTALL_TARGETS_DEFAULT_ARGS} )
+-if (HAVE_LIBCAP)
+-    install(
+-    CODE "execute_process(
+-            COMMAND
+-                ${SETCAP_EXECUTABLE}
+-                CAP_SYS_NICE=+ep
+-                \$ENV{DESTDIR}${CMAKE_INSTALL_FULL_BINDIR}/kwin_wayland)"
+-    )
+-endif()
+
+ add_subdirectory(platformsupport)
+ add_subdirectory(plugins)
diff --git a/pkgs/desktops/plasma-5/kwin/series b/pkgs/desktops/plasma-5/kwin/series
index 9dbc88f49975..8efb74eabd67 100644
--- a/pkgs/desktops/plasma-5/kwin/series
+++ b/pkgs/desktops/plasma-5/kwin/series
@@ -1,2 +1,3 @@
 follow-symlinks.patch
 xwayland.patch
+no-setcap-install.patch
diff --git a/pkgs/desktops/plasma-5/plasma-desktop/default.nix b/pkgs/desktops/plasma-5/plasma-desktop/default.nix
index 318d416d8859..32bd5f3a9f28 100644
--- a/pkgs/desktops/plasma-5/plasma-desktop/default.nix
+++ b/pkgs/desktops/plasma-5/plasma-desktop/default.nix
@@ -12,7 +12,7 @@
   kdeclarative, kded, kdelibs4support, kemoticons, kglobalaccel, ki18n,
   kitemmodels, knewstuff, knotifications, knotifyconfig, kpeople, krunner,
   kscreenlocker, ksysguard, kwallet, kwin, phonon, plasma-framework,
-  plasma-workspace,
+  plasma-workspace, xf86inputlibinput
 }:
 
 mkDerivation rec {
@@ -41,6 +41,7 @@ mkDerivation rec {
   cmakeFlags = [
     "-DEvdev_INCLUDE_DIRS=${lib.getDev xf86inputevdev}/include/xorg"
     "-DSynaptics_INCLUDE_DIRS=${lib.getDev xf86inputsynaptics}/include/xorg"
+    "-DXORGLIBINPUT_INCLUDE_DIRS=${lib.getDev xf86inputlibinput}/include/xorg"
   ];
   postInstall = ''
     # Display ~/Desktop contents on the desktop by default.
diff --git a/pkgs/desktops/plasma-5/plasma-workspace/plasma-workspace.patch b/pkgs/desktops/plasma-5/plasma-workspace/plasma-workspace.patch
index d951c03b5d3d..e012537e4028 100644
--- a/pkgs/desktops/plasma-5/plasma-workspace/plasma-workspace.patch
+++ b/pkgs/desktops/plasma-5/plasma-workspace/plasma-workspace.patch
@@ -1,5 +1,5 @@
 diff --git a/applets/batterymonitor/package/contents/ui/BatteryItem.qml b/applets/batterymonitor/package/contents/ui/BatteryItem.qml
-index 7e2d9758..40a5797b 100644
+index 7e2d975..40a5797 100644
 --- a/applets/batterymonitor/package/contents/ui/BatteryItem.qml
 +++ b/applets/batterymonitor/package/contents/ui/BatteryItem.qml
 @@ -26,7 +26,7 @@ import org.kde.plasma.components 2.0 as PlasmaComponents
@@ -12,7 +12,7 @@ index 7e2d9758..40a5797b 100644
  Item {
      id: batteryItem
 diff --git a/applets/batterymonitor/package/contents/ui/batterymonitor.qml b/applets/batterymonitor/package/contents/ui/batterymonitor.qml
-index ae6d5919..c2f99c86 100644
+index 50deee5..45b6b37 100644
 --- a/applets/batterymonitor/package/contents/ui/batterymonitor.qml
 +++ b/applets/batterymonitor/package/contents/ui/batterymonitor.qml
 @@ -25,7 +25,7 @@ import org.kde.plasma.plasmoid 2.0
@@ -25,7 +25,7 @@ index ae6d5919..c2f99c86 100644
  Item {
      id: batterymonitor
 diff --git a/applets/lock_logout/contents/ui/lockout.qml b/applets/lock_logout/contents/ui/lockout.qml
-index 80e7e53b..0083cf01 100644
+index 80e7e53..0083cf0 100644
 --- a/applets/lock_logout/contents/ui/lockout.qml
 +++ b/applets/lock_logout/contents/ui/lockout.qml
 @@ -23,7 +23,7 @@ import org.kde.plasma.plasmoid 2.0
@@ -38,7 +38,7 @@ index 80e7e53b..0083cf01 100644
  Flow {
      id: lockout
 diff --git a/applets/notifications/package/contents/ui/main.qml b/applets/notifications/package/contents/ui/main.qml
-index acdda88f..989de8ab 100644
+index cb15cfa..a6976ba 100644
 --- a/applets/notifications/package/contents/ui/main.qml
 +++ b/applets/notifications/package/contents/ui/main.qml
 @@ -28,7 +28,7 @@ import org.kde.plasma.extras 2.0 as PlasmaExtras
@@ -51,7 +51,7 @@ index acdda88f..989de8ab 100644
  MouseEventListener {
      id: notificationsApplet
 diff --git a/krunner/dbus/org.kde.krunner.service.in b/krunner/dbus/org.kde.krunner.service.in
-index 85715214..294eab08 100644
+index 8571521..294eab0 100644
 --- a/krunner/dbus/org.kde.krunner.service.in
 +++ b/krunner/dbus/org.kde.krunner.service.in
 @@ -1,4 +1,4 @@
@@ -61,7 +61,7 @@ index 85715214..294eab08 100644
 +Exec=@CMAKE_INSTALL_FULL_BINDIR@/krunner
  
 diff --git a/kuiserver/org.kde.kuiserver.service.in b/kuiserver/org.kde.kuiserver.service.in
-index 7a86d07f..5b3030cc 100644
+index 7a86d07..5b3030c 100644
 --- a/kuiserver/org.kde.kuiserver.service.in
 +++ b/kuiserver/org.kde.kuiserver.service.in
 @@ -1,3 +1,3 @@
@@ -70,7 +70,7 @@ index 7a86d07f..5b3030cc 100644
 -Exec=@CMAKE_INSTALL_PREFIX@/bin/kuiserver5
 +Exec=@CMAKE_INSTALL_FULL_BINDIR@/kuiserver5
 diff --git a/startkde/CMakeLists.txt b/startkde/CMakeLists.txt
-index fe29f57a..247db953 100644
+index fe29f57..247db95 100644
 --- a/startkde/CMakeLists.txt
 +++ b/startkde/CMakeLists.txt
 @@ -3,11 +3,6 @@ add_subdirectory(kstartupconfig)
@@ -86,7 +86,7 @@ index fe29f57a..247db953 100644
  configure_file(startplasmacompositor.cmake ${CMAKE_CURRENT_BINARY_DIR}/startplasmacompositor  @ONLY)
  configure_file(startplasma.cmake ${CMAKE_CURRENT_BINARY_DIR}/startplasma  @ONLY)
 diff --git a/startkde/kstartupconfig/kstartupconfig.cpp b/startkde/kstartupconfig/kstartupconfig.cpp
-index c9927855..bd506ce2 100644
+index c992785..bd506ce 100644
 --- a/startkde/kstartupconfig/kstartupconfig.cpp
 +++ b/startkde/kstartupconfig/kstartupconfig.cpp
 @@ -147,5 +147,5 @@ int main()
@@ -97,7 +97,7 @@ index c9927855..bd506ce2 100644
 +    return system( NIXPKGS_KDOSTARTUPCONFIG5 );
      }
 diff --git a/startkde/startkde.cmake b/startkde/startkde.cmake
-index e9fa0bee..79e50a96 100644
+index b3117b4..e70110e 100644
 --- a/startkde/startkde.cmake
 +++ b/startkde/startkde.cmake
 @@ -1,22 +1,31 @@
@@ -142,11 +142,10 @@ index e9fa0bee..79e50a96 100644
  fi
  
  # Boot sequence:
-@@ -33,59 +42,132 @@ fi
+@@ -33,61 +42,133 @@ fi
  #
  # * Then ksmserver is started which takes control of the rest of the startup sequence
  
--# We need to create config folder so we can write startupconfigkeys
 -if [  ${XDG_CONFIG_HOME} ]; then
 -  configDir=$XDG_CONFIG_HOME;
 -else
@@ -174,7 +173,9 @@ index e9fa0bee..79e50a96 100644
 +if [ -e $XDG_CONFIG_HOME/Trolltech.conf ]; then
 +    @NIXPKGS_SED@ -e '/nix\\store\|nix\/store/ d' -i $XDG_CONFIG_HOME/Trolltech.conf
  fi
+ sysConfigDirs=${XDG_CONFIG_DIRS:-/etc/xdg}
  
+-# We need to create config folder so we can write startupconfigkeys
 -mkdir -p $configDir
 +@NIXPKGS_KBUILDSYCOCA5@
 +
@@ -297,13 +298,14 @@ index e9fa0bee..79e50a96 100644
      exit 1
  fi
 -[ -r $configDir/startupconfig ] && . $configDir/startupconfig
+-
 +if [ -r "$XDG_CONFIG_HOME/startupconfig" ]; then
 +    . "$XDG_CONFIG_HOME/startupconfig"
 +fi
  
- if [ "$kdeglobals_kscreen_screenscalefactors" ]; then
-     export QT_SCREEN_SCALE_FACTORS="$kdeglobals_kscreen_screenscalefactors"
-@@ -94,26 +176,33 @@ fi
+ #Do not sync any of this section with the wayland versions as there scale factors are
+ #sent properly over wl_output
+@@ -99,26 +180,33 @@ fi
  #otherwise apps that manually opt in for high DPI get auto scaled by the developer AND manually scaled by us
  export QT_AUTO_SCREEN_SCALE_FACTOR=0
  
@@ -350,7 +352,7 @@ index e9fa0bee..79e50a96 100644
  Xft.dpi: $kcmfonts_general_forcefontdpi
  EOF
  fi
-@@ -122,11 +211,11 @@ dl=$DESKTOP_LOCKED
+@@ -127,11 +215,11 @@ dl=$DESKTOP_LOCKED
  unset DESKTOP_LOCKED # Don't want it in the environment
  
  ksplash_pid=
@@ -364,14 +366,13 @@ index e9fa0bee..79e50a96 100644
        ;;
      None)
        ;;
-@@ -135,71 +224,6 @@ if test -z "$dl"; then
+@@ -140,69 +228,6 @@ if test -z "$dl"; then
    esac
  fi
  
 -# Source scripts found in <config locations>/plasma-workspace/env/*.sh
 -# (where <config locations> correspond to the system and user's configuration
--# directories, as identified by Qt's qtpaths,  e.g.  $HOME/.config
--# and /etc/xdg/ on Linux)
+-# directory.
 -#
 -# This is where you can define environment variables that will be available to
 -# all KDE programs, so this is where you can run agents using e.g. eval `ssh-agent`
@@ -382,11 +383,10 @@ index e9fa0bee..79e50a96 100644
 -# For anything else (that doesn't set env vars, or that needs a window manager),
 -# better use the Autostart folder.
 -
--scriptpath=`qtpaths --locate-dirs GenericConfigLocation plasma-workspace | tr ':' '\n'`
+-scriptpath=`echo "$configDir:$sysConfigDirs" | tr ':' '\n'`
 -
--# Add /env/ to the directory to locate the scripts to be sourced
 -for prefix in `echo $scriptpath`; do
--  for file in "$prefix"/env/*.sh; do
+-  for file in "$prefix"/plasma-workspace/env/*.sh; do
 -    test -r "$file" && . "$file" || true
 -  done
 -done
@@ -436,7 +436,7 @@ index e9fa0bee..79e50a96 100644
  # Set a left cursor instead of the standard X11 "X" cursor, since I've heard
  # from some users that they're confused and don't know what to do. This is
  # especially necessary on slow machines, where starting KDE takes one or two
-@@ -208,28 +232,10 @@ xset fp rehash
+@@ -211,28 +236,10 @@ xset fp rehash
  # If the user has overwritten fonts, the cursor font may be different now
  # so don't move this up.
  #
@@ -466,7 +466,7 @@ index e9fa0bee..79e50a96 100644
  # Mark that full KDE session is running (e.g. Konqueror preloading works only
  # with full KDE running). The KDE_FULL_SESSION property can be detected by
  # any X client connected to the same X session, even if not launched
-@@ -254,44 +260,65 @@ export XDG_DATA_DIRS
+@@ -257,44 +264,65 @@ export XDG_DATA_DIRS
  #
  KDE_FULL_SESSION=true
  export KDE_FULL_SESSION
@@ -545,7 +545,7 @@ index e9fa0bee..79e50a96 100644
  
  # finally, give the session control to the session manager
  # see kdebase/ksmserver for the description of the rest of the startup sequence
-@@ -303,34 +330,37 @@ qdbus org.kde.KSplash /KSplash org.kde.KSplash.setStage kinit &
+@@ -306,34 +334,37 @@ qdbus org.kde.KSplash /KSplash org.kde.KSplash.setStage kinit &
  # We only check for 255 which means that the ksmserver process could not be
  # started, any problems thereafter, e.g. ksmserver failing to initialize,
  # will remain undetected.
@@ -594,7 +594,7 @@ index e9fa0bee..79e50a96 100644
              done
              break
          fi
-@@ -339,15 +369,17 @@ fi
+@@ -342,15 +373,17 @@ fi
  
  echo 'startkde: Shutting down...'  1>&2
  # just in case
@@ -617,7 +617,7 @@ index e9fa0bee..79e50a96 100644
  
  echo 'startkde: Done.'  1>&2
 diff --git a/startkde/startplasma.cmake b/startkde/startplasma.cmake
-index 9f875110..2a7a2a70 100644
+index a5d09fa..d42c284 100644
 --- a/startkde/startplasma.cmake
 +++ b/startkde/startplasma.cmake
 @@ -1,6 +1,6 @@
@@ -714,7 +714,7 @@ index 9f875110..2a7a2a70 100644
  # Set a left cursor instead of the standard X11 "X" cursor, since I've heard
  # from some users that they're confused and don't know what to do. This is
  # especially necessary on slow machines, where starting KDE takes one or two
-@@ -100,35 +56,25 @@ xset fp rehash
+@@ -100,22 +56,13 @@ xset fp rehash
  # If the user has overwritten fonts, the cursor font may be different now
  # so don't move this up.
  #
@@ -738,6 +738,10 @@ index 9f875110..2a7a2a70 100644
 +@NIXPKGS_XPROP@ -root -f KDE_FULL_SESSION 8t -set KDE_FULL_SESSION true
 +@NIXPKGS_XPROP@ -root -f KDE_SESSION_VERSION 32c -set KDE_SESSION_VERSION 5
  
+ # At this point all environment variables are set, let's send it to the DBus session server to update the activation environment
+ if which dbus-update-activation-environment >/dev/null 2>/dev/null ; then
+@@ -131,16 +78,15 @@ fi
+ 
  # We set LD_BIND_NOW to increase the efficiency of kdeinit.
  # kdeinit unsets this variable before loading applications.
 -LD_BIND_NOW=true @CMAKE_INSTALL_FULL_LIBEXECDIR_KF5@/start_kdeinit_wrapper --kded +kcminit_startup
@@ -755,17 +759,8 @@ index 9f875110..2a7a2a70 100644
  
  # finally, give the session control to the session manager
  # see kdebase/ksmserver for the description of the rest of the startup sequence
-@@ -143,27 +89,26 @@ qdbus org.kde.KSplash /KSplash org.kde.KSplash.setStage kinit
- # If the session should be locked from the start (locked autologin),
- # lock now and do the rest of the KDE startup underneath the locker.
- KSMSERVEROPTIONS=" --no-lockscreen"
--kwrapper5 @CMAKE_INSTALL_FULL_BINDIR@/ksmserver $KDEWM $KSMSERVEROPTIONS
-+@NIXPKGS_KWRAPPER5@ @CMAKE_INSTALL_FULL_BINDIR@/ksmserver $KDEWM $KSMSERVEROPTIONS
- if test $? -eq 255; then
-   # Startup error
-   echo 'startplasma: Could not start ksmserver. Check your installation.'  1>&2
-   test -n "$ksplash_pid" && kill "$ksplash_pid" 2>/dev/null
--  xmessage -geometry 500x100 "Could not start ksmserver. Check your installation."
+@@ -163,19 +109,19 @@ if test $? -eq 255; then
+   xmessage -geometry 500x100 "Could not start ksmserver. Check your installation."
  fi
  
 -wait_drkonqi=`kreadconfig5 --file startkderc --group WaitForDrKonqi --key Enabled --default true`
@@ -791,13 +786,13 @@ index 9f875110..2a7a2a70 100644
              done
              break
          fi
-@@ -172,15 +117,17 @@ fi
+@@ -184,15 +130,17 @@ fi
  
  echo 'startplasma: Shutting down...'  1>&2
  # just in case
 -test -n "$ksplash_pid" && kill "$ksplash_pid" 2>/dev/null
 +if [ -n "$ksplash_pid" ]; then
-+    kill "$ksplash_pid" 2>/dev/null
++ "$ksplash_pid" 2>/dev/null
 +fi
  
  # Clean up
@@ -814,27 +809,21 @@ index 9f875110..2a7a2a70 100644
  
  echo 'startplasma: Done.'  1>&2
 diff --git a/startkde/startplasmacompositor.cmake b/startkde/startplasmacompositor.cmake
-index 417a87d4..3f62745a 100644
+index 8ac47aa..49970ef 100644
 --- a/startkde/startplasmacompositor.cmake
 +++ b/startkde/startplasmacompositor.cmake
-@@ -1,173 +1,171 @@
+@@ -1,118 +1,165 @@
  #!/bin/sh
  #
 -#  DEFAULT Plasma STARTUP SCRIPT ( @PROJECT_VERSION@ )
 +#  NIXPKGS Plasma STARTUP SCRIPT ( @PROJECT_VERSION@ )
  #
  
--# in case we have been started with full pathname spec without being in PATH
--bindir=`echo "$0" | sed -n 's,^\(/.*\)/[^/][^/]*$,\1,p'`
--if [ -n "$bindir" ]; then
--  qbindir=`qtpaths --binaries-dir`
--  qdbus=$qbindir/qdbus
--  case $PATH in
--    $bindir|$bindir:*|*:$bindir|*:$bindir:*) ;;
--    *) PATH=$bindir:$PATH; export PATH;;
--  esac
+-# We need to create config folder so we can write startupconfigkeys
+-if [  ${XDG_CONFIG_HOME} ]; then
+-  configDir=$XDG_CONFIG_HOME;
 -else
--  qdbus=qdbus
+-  configDir=${HOME}/.config; #this is the default, http://standards.freedesktop.org/basedir-spec/basedir-spec-latest.html
 +# we have to unset this for Darwin since it will screw up KDE's dynamic-loading
 +unset DYLD_FORCE_FLAT_NAMESPACE
 +
@@ -860,13 +849,8 @@ index 417a87d4..3f62745a 100644
 +# Qt from doing this wackiness in the first place.
 +if [ -e $XDG_CONFIG_HOME/Trolltech.conf ]; then
 +    @NIXPKGS_SED@ -e '/nix\\store\|nix\/store/ d' -i $XDG_CONFIG_HOME/Trolltech.conf
- fi
- 
--# We need to create config folder so we can write startupconfigkeys
--if [  ${XDG_CONFIG_HOME} ]; then
--  configDir=$XDG_CONFIG_HOME;
--else
--  configDir=${HOME}/.config; #this is the default, http://standards.freedesktop.org/basedir-spec/basedir-spec-latest.html
++fi
++
 +@NIXPKGS_KBUILDSYCOCA5@
 +
 +# Set the default GTK 2 theme
@@ -891,7 +875,9 @@ index 417a87d4..3f62745a 100644
 +gtk-button-images=1
 +EOF
  fi
+ sysConfigDirs=${XDG_CONFIG_DIRS:-/etc/xdg}
  
+-# We need to create config folder so we can write startupconfigkeys
 -mkdir -p $configDir
 +# Set the default GTK 3 theme
 +gtk3_settings="$XDG_CONFIG_HOME/gtk-3.0/settings.ini"
@@ -1012,8 +998,8 @@ index 417a87d4..3f62745a 100644
 -    }
  fi
  
--kstartupconfig5
--returncode=$?
+ kstartupconfig5
+ returncode=$?
 -if test $returncode -ne 0; then
 +if ! @CMAKE_INSTALL_FULL_BINDIR@/kstartupconfig5; then
      exit 1
@@ -1047,7 +1033,7 @@ index 417a87d4..3f62745a 100644
 -        XCURSOR_THEME="$kcminputrc_mouse_cursortheme"
 -        export XCURSOR_THEME
 +if [ -n "$kcminputrc_mouse_cursortheme" -o -n "$kcminputrc_mouse_cursorsize" ]; then
-+    kapplymousetheme "$kcminputrc_mouse_cursortheme" "$kcminputrc_mouse_cursorsize"
++    #kapplymousetheme "$kcminputrc_mouse_cursortheme" "$kcminputrc_mouse_cursorsize"
 +    if [ $? -eq 10 ]; then
 +        export XCURSOR_THEME=breeze_cursors
 +    elif [ -n "$kcminputrc_mouse_cursortheme" ]; then
@@ -1066,6 +1052,23 @@ index 417a87d4..3f62745a 100644
      export QT_WAYLAND_FORCE_DPI=$kcmfonts_general_forcefontdpiwayland
  else
      export QT_WAYLAND_FORCE_DPI=96
+@@ -120,12 +167,12 @@ fi
+ 
+ # Get a property value from org.freedesktop.locale1
+ queryLocale1() {
+-    qdbus --system org.freedesktop.locale1 /org/freedesktop/locale1 "$1"
++    @NIXPKGS_QDBUS@ --system org.freedesktop.locale1 /org/freedesktop/locale1 "$1"
+ }
+ 
+ # Query whether org.freedesktop.locale1 is available. If it is, try to
+ # set XKB_DEFAULT_{MODEL,LAYOUT,VARIANT,OPTIONS} accordingly.
+-if qdbus --system org.freedesktop.locale1 >/dev/null 2>/dev/null; then
++if @NIXPKGS_QDBUS@ --system org.freedesktop.locale1 >/dev/null 2>/dev/null; then
+     # Do not overwrite existing values. There is no point in setting only some
+     # of them as then they would not match anymore.
+     if [ -z "${XKB_DEFAULT_MODEL}" -a -z "${XKB_DEFAULT_LAYOUT}" -a \
+@@ -141,41 +188,10 @@ if qdbus --system org.freedesktop.locale1 >/dev/null 2>/dev/null; then
+     fi
  fi
  
 -# Source scripts found in <config locations>/plasma-workspace/env/*.sh
@@ -1082,13 +1085,11 @@ index 417a87d4..3f62745a 100644
 -# For anything else (that doesn't set env vars, or that needs a window manager),
 -# better use the Autostart folder.
 -
--# TODO: Use GenericConfigLocation once we depend on Qt 5.4
--scriptpath=`qtpaths --paths ConfigLocation | tr ':' '\n' | sed 's,$,/plasma-workspace,g'`
+-scriptpath=`echo "$configDir:$sysConfigDirs" | tr ':' '\n'`
 -
--# Add /env/ to the directory to locate the scripts to be sourced
 -for prefix in `echo $scriptpath`; do
--  for file in "$prefix"/env/*.sh; do
--    test -r "$file" && . "$file"
+-  for file in "$prefix"/plasma-workspace/env/*.sh; do
+-    test -r "$file" && . "$file" || true
 -  done
 -done
 -
@@ -1104,14 +1105,12 @@ index 417a87d4..3f62745a 100644
 -export XDG_DATA_DIRS
 -
  # Make sure that D-Bus is running
--if $qdbus >/dev/null 2>/dev/null; then
--    : # ok
--else
-+if ! @NIXPKGS_QDBUS@ >/dev/null 2>/dev/null; then
+-if qdbus >/dev/null 2>/dev/null; then
++if @NIXPKGS_QDBUS@ >/dev/null 2>/dev/null; then
+     : # ok
+ else
      echo 'startplasmacompositor: Could not start D-Bus. Can you call qdbus?'  1>&2
-     test -n "$ksplash_pid" && kill "$ksplash_pid" 2>/dev/null
-     exit 1
-@@ -202,7 +200,7 @@ export KDE_FULL_SESSION
+@@ -212,7 +228,7 @@ export KDE_FULL_SESSION
  KDE_SESSION_VERSION=5
  export KDE_SESSION_VERSION
  
@@ -1120,7 +1119,7 @@ index 417a87d4..3f62745a 100644
  export KDE_SESSION_UID
  
  XDG_CURRENT_DESKTOP=KDE
-@@ -212,26 +210,47 @@ export XDG_CURRENT_DESKTOP
+@@ -222,20 +238,41 @@ export XDG_CURRENT_DESKTOP
  QT_QPA_PLATFORM=wayland
  export QT_QPA_PLATFORM
  
@@ -1148,7 +1147,8 @@ index 417a87d4..3f62745a 100644
 +    done
 +done
 +
- # At this point all environment variables are set, let's send it to the DBus session server to update the activation environment
+ # kwin_wayland can possibly also start dbus-activated services which need env variables.
+ # In that case, the update in startplasma might be too late.
 -if which dbus-update-activation-environment >/dev/null 2>/dev/null ; then
 -    dbus-update-activation-environment --systemd --all
 -else
@@ -1171,17 +1171,8 @@ index 417a87d4..3f62745a 100644
  
  echo 'startplasmacompositor: Shutting down...'  1>&2
  
- unset KDE_FULL_SESSION
--xprop -root -remove KDE_FULL_SESSION
-+@NIXPKGS_XPROP@ -root -remove KDE_FULL_SESSION
- unset KDE_SESSION_VERSION
--xprop -root -remove KDE_SESSION_VERSION
-+@NIXPKGS_XPROP@ -root -remove KDE_SESSION_VERSION
- unset KDE_SESSION_UID
- 
- echo 'startplasmacompositor: Done.'  1>&2
 diff --git a/startkde/waitforname/org.kde.plasma.Notifications.service.in b/startkde/waitforname/org.kde.plasma.Notifications.service.in
-index 0a51b84b..f48b5d8a 100644
+index 0a51b84..f48b5d8 100644
 --- a/startkde/waitforname/org.kde.plasma.Notifications.service.in
 +++ b/startkde/waitforname/org.kde.plasma.Notifications.service.in
 @@ -1,3 +1,3 @@
diff --git a/pkgs/desktops/plasma-5/srcs.nix b/pkgs/desktops/plasma-5/srcs.nix
index ee605bdba8a2..8d959478a0d4 100644
--- a/pkgs/desktops/plasma-5/srcs.nix
+++ b/pkgs/desktops/plasma-5/srcs.nix
@@ -3,355 +3,355 @@
 
 {
   bluedevil = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/bluedevil-5.11.5.tar.xz";
-      sha256 = "0xzdf1qrf2nlpvn2hr9zk72hw027i318s9pnzgmqg1lwhdr276h5";
-      name = "bluedevil-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/bluedevil-5.12.2.tar.xz";
+      sha256 = "11xwyawcfkxhdzcgj4nkj1vlp6zn53k9dl3c4llpj1z08jc2vdpj";
+      name = "bluedevil-5.12.2.tar.xz";
     };
   };
   breeze = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/breeze-5.11.5.tar.xz";
-      sha256 = "0xxwnhxpkdf4nyc1rvsjrnqsv1cgzs3a88mwfwpvci4snfva8jp1";
-      name = "breeze-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/breeze-5.12.2.tar.xz";
+      sha256 = "1vx03wi4m6ly6sw7cznhzg96rkxbn2mxsn9719pra616axl6c00s";
+      name = "breeze-5.12.2.tar.xz";
     };
   };
   breeze-grub = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/breeze-grub-5.11.5.tar.xz";
-      sha256 = "1l3dv1acgs6ssydg985d90136p9n4h0xry3xlx12g5wg07i8s89g";
-      name = "breeze-grub-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/breeze-grub-5.12.2.tar.xz";
+      sha256 = "1a76xbnrbd18cd6p0n94fixc7jmd8vdnzqbi9pbi3wj82cpp95xq";
+      name = "breeze-grub-5.12.2.tar.xz";
     };
   };
   breeze-gtk = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/breeze-gtk-5.11.5.tar.xz";
-      sha256 = "0mkd1gqih5irmabxly2y744sr1iwxy7r7hx68jrd452nbvqvyrqq";
-      name = "breeze-gtk-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/breeze-gtk-5.12.2.tar.xz";
+      sha256 = "1811r8gqhrdf5b4a1k94cid1whcd8g6h2mrms6qm40brzj8qn9w0";
+      name = "breeze-gtk-5.12.2.tar.xz";
     };
   };
   breeze-plymouth = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/breeze-plymouth-5.11.5.tar.xz";
-      sha256 = "0ydfrrsqvzn71j9x1f26771x99yiq59h745k476dcqajj2m0ari3";
-      name = "breeze-plymouth-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/breeze-plymouth-5.12.2.tar.xz";
+      sha256 = "1n96iysljakhhkw9wavhbvj29zlkkajgwpxs6v5ny4iifv9gn3cv";
+      name = "breeze-plymouth-5.12.2.tar.xz";
     };
   };
   discover = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/discover-5.11.5.tar.xz";
-      sha256 = "0yxsp4jimyrsxf72hinqa51ycg4hmfxrxdicm9n8qfz47srcgkml";
-      name = "discover-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/discover-5.12.2.tar.xz";
+      sha256 = "1hkbannyrw1c6h45c8s669d4hg6irc991hjlg0mm31lnpa8lb51v";
+      name = "discover-5.12.2.tar.xz";
     };
   };
   drkonqi = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/drkonqi-5.11.5.tar.xz";
-      sha256 = "1kngafr1hdq6r02mpd4bj5lgbgzk2cd10f5zqsvdfgsirz91vfsf";
-      name = "drkonqi-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/drkonqi-5.12.2.tar.xz";
+      sha256 = "0dw9axkhp0cgw276cpfp4ddf5g9s2ccz6q43pk68fvphbz7m2wqm";
+      name = "drkonqi-5.12.2.tar.xz";
     };
   };
   kactivitymanagerd = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/kactivitymanagerd-5.11.5.tar.xz";
-      sha256 = "11nnmqpw4kq96912rys2a539yzgncc5vp7b52wgc4is9i5czsr50";
-      name = "kactivitymanagerd-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/kactivitymanagerd-5.12.2.tar.xz";
+      sha256 = "1l6ar094y272fjxzj6qpapz4g5mfbf82z80zygmrs0cizpz1xv84";
+      name = "kactivitymanagerd-5.12.2.tar.xz";
     };
   };
   kde-cli-tools = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/kde-cli-tools-5.11.5.tar.xz";
-      sha256 = "0d4d360pq6winykjp6lgq77k9yc435d5g71dj7bivkyilqc4cp8c";
-      name = "kde-cli-tools-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/kde-cli-tools-5.12.2.tar.xz";
+      sha256 = "1jd7r49i24psrx59n0djbbxbv8c3wchiabgrv4x4dq6nsqygh6vc";
+      name = "kde-cli-tools-5.12.2.tar.xz";
     };
   };
   kdecoration = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/kdecoration-5.11.5.tar.xz";
-      sha256 = "0hl9mqwyfkh1r5nbl46g5axi446fdf7fw09b7v6l3jg9c5xbx89d";
-      name = "kdecoration-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/kdecoration-5.12.2.tar.xz";
+      sha256 = "1whngfld0nlw3mbf70khvqiqqskfglnn3dzx5zg0l14xv0kips79";
+      name = "kdecoration-5.12.2.tar.xz";
     };
   };
   kde-gtk-config = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/kde-gtk-config-5.11.5.tar.xz";
-      sha256 = "1y9ji82qlvp2z00xw0l32zj8asbg85n6azw8ringg2l6376r01l6";
-      name = "kde-gtk-config-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/kde-gtk-config-5.12.2.tar.xz";
+      sha256 = "1ncyj665hra8bj4nk2idpjq0lm72dr3r467ddx6k0n63arvfmxm4";
+      name = "kde-gtk-config-5.12.2.tar.xz";
     };
   };
   kdeplasma-addons = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/kdeplasma-addons-5.11.5.tar.xz";
-      sha256 = "1vp9r7ia5wriw5srpyq89nqdp82akz3jnh7dcbh2h0gdagw7hb94";
-      name = "kdeplasma-addons-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/kdeplasma-addons-5.12.2.tar.xz";
+      sha256 = "00x0jd8jw77fh5qy5z9xldw3m27il9mamq0fl8f4vmny7y8hqg2k";
+      name = "kdeplasma-addons-5.12.2.tar.xz";
     };
   };
   kgamma5 = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/kgamma5-5.11.5.tar.xz";
-      sha256 = "16vlx51n52j5q1nfsz4ji6bz4x6sfagxzn6q3r6ckj41rkwmp9gg";
-      name = "kgamma5-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/kgamma5-5.12.2.tar.xz";
+      sha256 = "1xhn8dw0595f48qbvj304agkg34y2pr0czvkpl1ahhzsndgjkxjs";
+      name = "kgamma5-5.12.2.tar.xz";
     };
   };
   khotkeys = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/khotkeys-5.11.5.tar.xz";
-      sha256 = "051yjqkf5bigz6cz2qbq0lggw9i6ydfaxrvy4xh40mw2c6x3xmvh";
-      name = "khotkeys-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/khotkeys-5.12.2.tar.xz";
+      sha256 = "1hsnasx67vf0jdxnmlvhm86ykvjc89zbr8rdgr1ixq6iy543c1ry";
+      name = "khotkeys-5.12.2.tar.xz";
     };
   };
   kinfocenter = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/kinfocenter-5.11.5.tar.xz";
-      sha256 = "0ym7i64k48x8dcln0lajj0379blp3c3a0axfcjibp3ya2xcaqdif";
-      name = "kinfocenter-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/kinfocenter-5.12.2.tar.xz";
+      sha256 = "0sagy72x94nv1zxvllkzgmln2j04bh8cib4fx3zsqfn572wncjqi";
+      name = "kinfocenter-5.12.2.tar.xz";
     };
   };
   kmenuedit = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/kmenuedit-5.11.5.tar.xz";
-      sha256 = "0wh4hk51k2mz1gqm9brvdy16gp2ap2iz5b6yjiqbkpz6giy88kwc";
-      name = "kmenuedit-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/kmenuedit-5.12.2.tar.xz";
+      sha256 = "1ygwv1s9zgd6qh3gd7537dgjil8h3i21i5wwn99wynbifq0w6ikv";
+      name = "kmenuedit-5.12.2.tar.xz";
     };
   };
   kscreen = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/kscreen-5.11.5.tar.xz";
-      sha256 = "0qa23qs8v8hm91190ssdnlg7dyljra7csgykb7d8la30yxa9vzc7";
-      name = "kscreen-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/kscreen-5.12.2.tar.xz";
+      sha256 = "1scmaydn4fypjizfm7l71vszx725vgbgsg7hpnv2dgwqrf98kl9v";
+      name = "kscreen-5.12.2.tar.xz";
     };
   };
   kscreenlocker = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/kscreenlocker-5.11.5.tar.xz";
-      sha256 = "0qrby8jxmvmnr1abkry8h5xapdswabj27n35s9l71d9lp9p96naz";
-      name = "kscreenlocker-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/kscreenlocker-5.12.2.tar.xz";
+      sha256 = "0v8qyjkmaxq711dw1iw12j38aswfr4qccvzkm3qc1gvfjs1vl0gn";
+      name = "kscreenlocker-5.12.2.tar.xz";
     };
   };
   ksshaskpass = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/ksshaskpass-5.11.5.tar.xz";
-      sha256 = "08jf6f1i9xn0zsz2j2czgdzcr203wrlj1nlam26dakrphhaj8vm2";
-      name = "ksshaskpass-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/ksshaskpass-5.12.2.tar.xz";
+      sha256 = "1b70jbdm3c4agk66v5yvzvzdlwp0xn8lmxn3zyk1n280xgqr2z1m";
+      name = "ksshaskpass-5.12.2.tar.xz";
     };
   };
   ksysguard = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/ksysguard-5.11.5.tar.xz";
-      sha256 = "161bcmsw4bjlsgkr3izfsqbiwambmm3za8mln3m96nf70gpqpa6i";
-      name = "ksysguard-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/ksysguard-5.12.2.tar.xz";
+      sha256 = "0k8ziqbvm8igczij3a26jyc0i7hwiqfv0072kywz76m9pfsd3lp7";
+      name = "ksysguard-5.12.2.tar.xz";
     };
   };
   kwallet-pam = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/kwallet-pam-5.11.5.tar.xz";
-      sha256 = "0wqnaszvwclz2gn74nmhqmci39525hwvpc3igxzjhdccnkfb5ac4";
-      name = "kwallet-pam-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/kwallet-pam-5.12.2.tar.xz";
+      sha256 = "0xg01iianf0ygpjf971i3fln0gn44gw83gxhplwjv3q5dn79plrd";
+      name = "kwallet-pam-5.12.2.tar.xz";
     };
   };
   kwayland-integration = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/kwayland-integration-5.11.5.tar.xz";
-      sha256 = "0xisgzymlhmbngvmv3dkh6a51dqnhcwrjj2480f0yxsmhvknxrps";
-      name = "kwayland-integration-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/kwayland-integration-5.12.2.tar.xz";
+      sha256 = "1s4vdsv8s72nplmk9395zfsp4fars14n2rkgqfp95b7ii76519nn";
+      name = "kwayland-integration-5.12.2.tar.xz";
     };
   };
   kwin = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/kwin-5.11.5.tar.xz";
-      sha256 = "06bz2vm78i1x0i0ljdqd2a0bnnrfwz9zvlg7r86qlmhkzn2dpc4z";
-      name = "kwin-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/kwin-5.12.2.tar.xz";
+      sha256 = "0lnyikmjsxjjbz7mrf421y1lw0vjqsri66dsjv2wldlbgifp94kw";
+      name = "kwin-5.12.2.tar.xz";
     };
   };
   kwrited = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/kwrited-5.11.5.tar.xz";
-      sha256 = "0sx5v1apambb8w6mndkkp2lvwlqwzbpxxp5d5zsz96lxndjx6sbv";
-      name = "kwrited-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/kwrited-5.12.2.tar.xz";
+      sha256 = "1n20g92h2hgcgp9qdxifp55acbkgh09chqz0p8qrj39vw5w5abv4";
+      name = "kwrited-5.12.2.tar.xz";
     };
   };
   libkscreen = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/libkscreen-5.11.5.tar.xz";
-      sha256 = "03cnr7z74j2kjwbg1ddavmj0l8hpxg7bg2ipglirnzvp2ihv1wzg";
-      name = "libkscreen-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/libkscreen-5.12.2.tar.xz";
+      sha256 = "1hv180ac97m1i47c2bapv5bz149i8p55qyfxrka7fivhzszsa8x0";
+      name = "libkscreen-5.12.2.tar.xz";
     };
   };
   libksysguard = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/libksysguard-5.11.5.tar.xz";
-      sha256 = "0f2py4zkqzpxxf3mqaij0q8ka0v3nschj17dv6rbzzmr5mjv825f";
-      name = "libksysguard-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/libksysguard-5.12.2.tar.xz";
+      sha256 = "1nf847lwx88f8g0bknaxzn0q6cvs2xn1cz6ch7qrblg0a8v3ig19";
+      name = "libksysguard-5.12.2.tar.xz";
     };
   };
   milou = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/milou-5.11.5.tar.xz";
-      sha256 = "0ja7a668wv67vb3mgsd2nbjdcp0lm7aix5dpc496wr1jy47pxv8a";
-      name = "milou-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/milou-5.12.2.tar.xz";
+      sha256 = "1sick71qd04shs34nlsplln3zpgvrbal4jlklm4k094w487fvcc8";
+      name = "milou-5.12.2.tar.xz";
     };
   };
   oxygen = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/oxygen-5.11.5.tar.xz";
-      sha256 = "1n2xr3a0002xfiy99gjqlny76nxjlss1d3sgcj8adpza44j91228";
-      name = "oxygen-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/oxygen-5.12.2.tar.xz";
+      sha256 = "03g0pwk5n6idgrrm0g4hfvyls7h8by6lz6rp7h1i9ibpaph3czmy";
+      name = "oxygen-5.12.2.tar.xz";
     };
   };
   plasma-desktop = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/plasma-desktop-5.11.5.tar.xz";
-      sha256 = "0djzs80mr0radmhai3k7jnlwlp76maf7vvrgkfckzs63n1jhdhb3";
-      name = "plasma-desktop-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/plasma-desktop-5.12.2.tar.xz";
+      sha256 = "0wymhk1wzvx3ihq7gn4zkisp5x1n5m62fk1vmg5il75hn69qw4g5";
+      name = "plasma-desktop-5.12.2.tar.xz";
     };
   };
   plasma-integration = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/plasma-integration-5.11.5.tar.xz";
-      sha256 = "1rmq8i0flrvqcl21fnn94d58zyw55scagrzbjw92p34i1mllhif1";
-      name = "plasma-integration-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/plasma-integration-5.12.2.tar.xz";
+      sha256 = "0hyxn51vjdbkw9kj5nqp7lr1myjpnlp5ri01jwg43v5h44mq6k08";
+      name = "plasma-integration-5.12.2.tar.xz";
     };
   };
   plasma-nm = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/plasma-nm-5.11.5.tar.xz";
-      sha256 = "11lw26nd1rp2wbmqlf37wgk8qzv4fcc5x04g1i1h7c6hmjf5svqv";
-      name = "plasma-nm-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/plasma-nm-5.12.2.tar.xz";
+      sha256 = "0wlp0wqbcbnmclfvhii50sds1ij4la3wni9987xym7qrc8bxm43x";
+      name = "plasma-nm-5.12.2.tar.xz";
     };
   };
   plasma-pa = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/plasma-pa-5.11.5.tar.xz";
-      sha256 = "1gdkz9yx21skg3c95nwh1mwacvrklgpfl0cspsmyyfnbnv93cz94";
-      name = "plasma-pa-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/plasma-pa-5.12.2.tar.xz";
+      sha256 = "119gcgx8rrihhmxzfp7wj3v8q4vwzk989w9qn5b2y72vyvllbln7";
+      name = "plasma-pa-5.12.2.tar.xz";
     };
   };
   plasma-sdk = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/plasma-sdk-5.11.5.tar.xz";
-      sha256 = "013dc8dg0nhgdjlflgpqi28jsyparnwrj5am8lzvc0kkd9f69yhk";
-      name = "plasma-sdk-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/plasma-sdk-5.12.2.tar.xz";
+      sha256 = "0as3718rkcal8va6w1ip2prsvrp6b218r33hmhdkdbbshnx40csv";
+      name = "plasma-sdk-5.12.2.tar.xz";
     };
   };
   plasma-tests = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/plasma-tests-5.11.5.tar.xz";
-      sha256 = "00n1i6s1811w5h37i2iyy924495d2w24vfsl348cxplfxpxhcqf0";
-      name = "plasma-tests-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/plasma-tests-5.12.2.tar.xz";
+      sha256 = "1336kj277hrbgi5dx6z19dp8fgxhifnapd0jas4lq8z06gn6dh40";
+      name = "plasma-tests-5.12.2.tar.xz";
     };
   };
   plasma-vault = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/plasma-vault-5.11.5.tar.xz";
-      sha256 = "1pg891fahslnjn5jdsjjlw8i2l71ddznxjg96l9wycvh6nn7k0v6";
-      name = "plasma-vault-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/plasma-vault-5.12.2.tar.xz";
+      sha256 = "1hkdaxlr00s00ax0xm2zmfk9pwl4nrs1x2dna248s6dd06cjmapk";
+      name = "plasma-vault-5.12.2.tar.xz";
     };
   };
   plasma-workspace = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/plasma-workspace-5.11.5.tar.xz";
-      sha256 = "1ipklc6v2ml095sy80rgq4123vkk3famjwf8s3rgkk172s76qm98";
-      name = "plasma-workspace-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/plasma-workspace-5.12.2.tar.xz";
+      sha256 = "1v4xaviby76c833gx02s1bf0hk9smv4m2s8sp75yxirh2xv4azid";
+      name = "plasma-workspace-5.12.2.tar.xz";
     };
   };
   plasma-workspace-wallpapers = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/plasma-workspace-wallpapers-5.11.5.tar.xz";
-      sha256 = "0zhcpbb74phnmr24kxcp0k6gr7gjzdfbrrv4xjjb2qpg2d00l3pm";
-      name = "plasma-workspace-wallpapers-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/plasma-workspace-wallpapers-5.12.2.tar.xz";
+      sha256 = "1x6qi0cpr461vc7gn4fzz9dh9wfwz6hcgb8dsz82wdxpwssck7i7";
+      name = "plasma-workspace-wallpapers-5.12.2.tar.xz";
     };
   };
   plymouth-kcm = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/plymouth-kcm-5.11.5.tar.xz";
-      sha256 = "152fyg5hc3rzvqw0z88pgapnhc64jx34vcqgsslsfja8mwk9h0ql";
-      name = "plymouth-kcm-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/plymouth-kcm-5.12.2.tar.xz";
+      sha256 = "11kaprbcsd7j1kamsr9m9c27rj1ry8gxp1m6r1ibf9agimsmdfcb";
+      name = "plymouth-kcm-5.12.2.tar.xz";
     };
   };
   polkit-kde-agent = {
-    version = "1-5.11.5";
+    version = "1-5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/polkit-kde-agent-1-5.11.5.tar.xz";
-      sha256 = "0bwv567czi9h3rxgn19aw10nq5c674zd8wgk9nj006km1yyxrgy6";
-      name = "polkit-kde-agent-1-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/polkit-kde-agent-1-5.12.2.tar.xz";
+      sha256 = "176wb8sh9r4f1ij604x52w4q5nbhmnqwxid3w107cqwpydnh0dm9";
+      name = "polkit-kde-agent-1-5.12.2.tar.xz";
     };
   };
   powerdevil = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/powerdevil-5.11.5.tar.xz";
-      sha256 = "0jqf85bain8vj5plxvvbdwiwc2jyb1r6idajhr6igcpjryfa75hj";
-      name = "powerdevil-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/powerdevil-5.12.2.tar.xz";
+      sha256 = "0b9m3jm0ar84b2ln1ml5lk26nryrrlis7kj46whzqicwpdi7dpxw";
+      name = "powerdevil-5.12.2.tar.xz";
     };
   };
   sddm-kcm = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/sddm-kcm-5.11.5.tar.xz";
-      sha256 = "1ln1h4r614rg4w6b7g5l7yqqijkaaj04s4g4m41d8rg8z5ywq4v0";
-      name = "sddm-kcm-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/sddm-kcm-5.12.2.tar.xz";
+      sha256 = "0nh8kviqn43zh6kdqzfcqksp48k1brd8bg4kni2cbmzif6md3ay3";
+      name = "sddm-kcm-5.12.2.tar.xz";
     };
   };
   systemsettings = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/systemsettings-5.11.5.tar.xz";
-      sha256 = "0ycdfl585853481bjix63nnj7qvg767qpbyr015k32c1v3vllx8y";
-      name = "systemsettings-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/systemsettings-5.12.2.tar.xz";
+      sha256 = "06cfxydpcnzi5g6ipi7sgiswgrzhnksgyhsp56zgqdswbilanp4n";
+      name = "systemsettings-5.12.2.tar.xz";
     };
   };
   user-manager = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/user-manager-5.11.5.tar.xz";
-      sha256 = "1r4q411g2r6cz4z6bm5jwygfbvrfrl8dawdd69s6h93ixs7697s4";
-      name = "user-manager-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/user-manager-5.12.2.tar.xz";
+      sha256 = "047bssxfs8z1lhg25f263fq05w6m22mdk5i16ji5i11n26v8hdwa";
+      name = "user-manager-5.12.2.tar.xz";
     };
   };
   xdg-desktop-portal-kde = {
-    version = "5.11.5";
+    version = "5.12.2";
     src = fetchurl {
-      url = "${mirror}/stable/plasma/5.11.5/xdg-desktop-portal-kde-5.11.5.tar.xz";
-      sha256 = "07xwb4zbf0cp4a672vs631dh9cqyvn0j9wwlknc21jzr619mnkap";
-      name = "xdg-desktop-portal-kde-5.11.5.tar.xz";
+      url = "${mirror}/stable/plasma/5.12.2/xdg-desktop-portal-kde-5.12.2.tar.xz";
+      sha256 = "1gr07p281icc2v7cv3n6rzi1c70ddkwiw12n9klk3sxprjxmc0pm";
+      name = "xdg-desktop-portal-kde-5.12.2.tar.xz";
     };
   };
 }
diff --git a/pkgs/desktops/plasma-5/systemsettings.nix b/pkgs/desktops/plasma-5/systemsettings.nix
index 4c449aa2703c..a6199d9fbef2 100644
--- a/pkgs/desktops/plasma-5/systemsettings.nix
+++ b/pkgs/desktops/plasma-5/systemsettings.nix
@@ -2,7 +2,7 @@
   mkDerivation, extra-cmake-modules, kdoctools,
   kcmutils, kconfig, kdbusaddons, khtml, ki18n, kiconthemes, kio, kitemviews,
   kservice, kwindowsystem, kxmlgui, qtquickcontrols, qtquickcontrols2,
-  kactivities, kactivities-stats, kirigami2
+  kactivities, kactivities-stats, kirigami2, kcrash
 }:
 
 mkDerivation {
@@ -11,7 +11,7 @@ mkDerivation {
   buildInputs = [
     kcmutils kconfig kdbusaddons khtml ki18n kiconthemes kio kitemviews kservice
     kwindowsystem kxmlgui qtquickcontrols qtquickcontrols2
-    kactivities kactivities-stats kirigami2
+    kactivities kactivities-stats kirigami2 kcrash
   ];
   outputs = [ "bin" "dev" "out" ];
 }
diff --git a/pkgs/desktops/plasma-5/xdg-desktop-portal-kde.nix b/pkgs/desktops/plasma-5/xdg-desktop-portal-kde.nix
new file mode 100644
index 000000000000..115c5f2ac718
--- /dev/null
+++ b/pkgs/desktops/plasma-5/xdg-desktop-portal-kde.nix
@@ -0,0 +1,13 @@
+{
+  mkDerivation,
+  extra-cmake-modules, gettext, kdoctools, python,
+  kcoreaddons, knotifications
+}:
+
+mkDerivation {
+  name = "xdg-desktop-portal-kde";
+  nativeBuildInputs = [ extra-cmake-modules gettext kdoctools python ];
+  buildInputs = [
+    kcoreaddons knotifications
+  ];
+}
diff --git a/pkgs/desktops/xfce/core/xfce4-panel.nix b/pkgs/desktops/xfce/core/xfce4-panel.nix
index e91a3ab25ee9..e9f6240cbdfe 100644
--- a/pkgs/desktops/xfce/core/xfce4-panel.nix
+++ b/pkgs/desktops/xfce/core/xfce4-panel.nix
@@ -1,7 +1,7 @@
 { stdenv, fetchurl, pkgconfig, intltool, gtk, libxfce4util, libxfce4ui
 , libxfce4ui_gtk3, libwnck, exo, garcon, xfconf, libstartup_notification
 , makeWrapper, xfce4mixer, hicolor_icon_theme
-, withGtk3 ? false, gtk3, gettext
+, withGtk3 ? false, gtk3, gettext, glib_networking
 }:
 let
   inherit (stdenv.lib) optional;
@@ -40,7 +40,8 @@ stdenv.mkDerivation rec {
 
   postInstall = ''
     wrapProgram "$out/bin/xfce4-panel" \
-      --prefix GST_PLUGIN_SYSTEM_PATH : "$GST_PLUGIN_SYSTEM_PATH"
+      --prefix GST_PLUGIN_SYSTEM_PATH : "$GST_PLUGIN_SYSTEM_PATH" \
+      --prefix GIO_EXTRA_MODULES : "${glib_networking}/lib/gio/modules"
   '';
 
   enableParallelBuilding = true;
diff --git a/pkgs/desktops/xfce/panel-plugins/xfce4-weather-plugin.nix b/pkgs/desktops/xfce/panel-plugins/xfce4-weather-plugin.nix
index 419efbcbf95a..0af0e62244fd 100644
--- a/pkgs/desktops/xfce/panel-plugins/xfce4-weather-plugin.nix
+++ b/pkgs/desktops/xfce/panel-plugins/xfce4-weather-plugin.nix
@@ -5,11 +5,11 @@ stdenv.mkDerivation rec {
   name = "${p_name}-${ver_maj}.${ver_min}";
   p_name  = "xfce4-weather-plugin";
   ver_maj = "0.8";
-  ver_min = "7";
+  ver_min = "10";
 
   src = fetchurl {
     url = "mirror://xfce/src/panel-plugins/${p_name}/${ver_maj}/${name}.tar.bz2";
-    sha256 = "1c35iqqiphazkfdabbjdynk0qkc3r8vxhmk2jc6dkiv8d08727h7";
+    sha256 = "1f7ac2zr5s5w6krdpgsq252wxhhmcblia3j783132ilh8k246vgf";
   };
 
   nativeBuildInputs = [ pkgconfig intltool ];
diff --git a/pkgs/development/arduino/platformio/chrootenv.nix b/pkgs/development/arduino/platformio/chrootenv.nix
index a37206192417..69182c3aa0d8 100644
--- a/pkgs/development/arduino/platformio/chrootenv.nix
+++ b/pkgs/development/arduino/platformio/chrootenv.nix
@@ -1,18 +1,7 @@
-{ lib, buildFHSUserEnv, platformio, stdenv }:
-
-buildFHSUserEnv {
-  name = "platformio";
-
-  targetPkgs = pkgs: (with pkgs;
-    [
-      python27Packages.python
-      python27Packages.setuptools
-      python27Packages.pip
-      python27Packages.bottle
-      python27Packages.platformio
-      zlib
-    ]);
-  multiPkgs = pkgs: (with pkgs;
+{ stdenv, lib, buildFHSUserEnv
+}:
+let
+  pio-pkgs = pkgs: (with pkgs;
     [
       python27Packages.python
       python27Packages.setuptools
@@ -21,6 +10,12 @@ buildFHSUserEnv {
       python27Packages.platformio
       zlib
     ]);
+in
+buildFHSUserEnv {
+  name = "platformio";
+
+  targetPkgs = pio-pkgs;
+  multiPkgs = pio-pkgs;
 
   meta = with stdenv.lib; {
     description = "An open source ecosystem for IoT development";
diff --git a/pkgs/development/compilers/arachne-pnr/default.nix b/pkgs/development/compilers/arachne-pnr/default.nix
index 8dcebbf442b1..97eb8e8b6421 100644
--- a/pkgs/development/compilers/arachne-pnr/default.nix
+++ b/pkgs/development/compilers/arachne-pnr/default.nix
@@ -1,21 +1,29 @@
 { stdenv, fetchFromGitHub, icestorm }:
 
+with builtins;
+
 stdenv.mkDerivation rec {
   name = "arachne-pnr-${version}";
-  version = "2018.02.04";
+  version = "2018.02.14";
 
   src = fetchFromGitHub {
     owner  = "cseed";
     repo   = "arachne-pnr";
-    rev    = "c21df0062c6ee13e8c8280cefbb7c017823336c0";
-    sha256 = "1ah1gn07av3ff5lnay4p7dahaacbyj0mfakbx7g5fs3p1m1m8p1k";
+    rev    = "b54675413f9aac1d9a1fb0a8e9354bec2a2a8f3c";
+    sha256 = "06slsb239qk1r2g96n1g37yp8314cy7yi4g1yf86fr87fr11ml8l";
   };
 
   enableParallelBuilding = true;
   makeFlags =
-    [ "PREFIX=$(out)" "ICEBOX=${icestorm}/share/icebox"
+    [ "PREFIX=$(out)"
+      "ICEBOX=${icestorm}/share/icebox"
     ];
 
+  patchPhase = ''
+    substituteInPlace ./Makefile \
+      --replace 'echo UNKNOWN' 'echo ${substring 0 10 src.rev}'
+  '';
+
   meta = {
     description = "Place and route tool for FPGAs";
     longDescription = ''
diff --git a/pkgs/development/compilers/binaryen/default.nix b/pkgs/development/compilers/binaryen/default.nix
index 72eaae998779..3f9ee17ca279 100644
--- a/pkgs/development/compilers/binaryen/default.nix
+++ b/pkgs/development/compilers/binaryen/default.nix
@@ -1,14 +1,14 @@
 { stdenv, cmake, fetchFromGitHub }:
 
 stdenv.mkDerivation rec {
-  version = "33";
+  version = "42";
   rev = "version_${version}";
   name = "binaryen-${version}";
 
   src = fetchFromGitHub {
     owner = "WebAssembly";
     repo = "binaryen";
-    sha256 = "0zijs2mcgfv0iynwdb0l4zykm0891b1zccf6r8w35ipxvcdwbsbp";
+    sha256 = "0b8qc9cd7ncshgfjwv4hfapmwa81gmniaycnxmdkihq9bpm26x2k";
     inherit rev;
   };
 
diff --git a/pkgs/development/compilers/chez/default.nix b/pkgs/development/compilers/chez/default.nix
index f238e5f8fb50..3ffd024305de 100644
--- a/pkgs/development/compilers/chez/default.nix
+++ b/pkgs/development/compilers/chez/default.nix
@@ -2,8 +2,7 @@
 
 stdenv.mkDerivation rec {
   name    = "chez-scheme-${version}";
-  version = "9.5-${dver}";
-  dver    = "20171109";
+  version = "9.5.1";
 
   src = fetchgit {
     url    = "https://github.com/cisco/chezscheme.git";
@@ -13,10 +12,12 @@ stdenv.mkDerivation rec {
   };
 
   nativeBuildInputs = [ coreutils ] ++ stdenv.lib.optional stdenv.isDarwin cctools;
-
   buildInputs = [ ncurses libiconv libX11 ];
 
-  /* We patch out a very annoying 'feature' in ./configure, which
+  enableParallelBuilding = true;
+
+  /*
+  ** We patch out a very annoying 'feature' in ./configure, which
   ** tries to use 'git' to update submodules.
   **
   ** We have to also fix a few occurrences to tools with absolute
@@ -38,19 +39,47 @@ stdenv.mkDerivation rec {
       --replace "/usr/bin/libtool" libtool
   '';
 
-  /* Don't use configureFlags, since that just implicitly appends
+  /*
+  ** Don't use configureFlags, since that just implicitly appends
   ** everything onto a --prefix flag, which ./configure gets very angry
   ** about.
+  **
+  ** Also, carefully set a manual workarea argument, so that we
+  ** can later easily find the machine type that we built Chez
+  ** for.
   */
   configurePhase = ''
-    ./configure --threads --installprefix=$out --installman=$out/share/man
+    ./configure --threads \
+      --installprefix=$out --installman=$out/share/man \
+      --workarea=work
   '';
 
-  enableParallelBuilding = true;
+  /*
+  ** Install the kernel.o file, so we can compile C applications that
+  ** link directly to the Chez runtime (for booting their own files, or
+  ** embedding.)
+  **
+  ** Ideally in the future this would be less of a hack and could be
+  ** done by Chez itself. Alternatively, there could just be a big
+  ** case statement matching to the different stdenv.platform values...
+  */
+  postInstall = ''
+    m="$(ls ./work/boot)"
+    if [ "x''${m[1]}" != "x" ]; then
+      >&2 echo "ERROR: more than one bootfile build found; this is a nixpkgs error"
+      exit 1
+    fi
+
+    kernel=./work/boot/$m/kernel.o
+    kerneldest=$out/lib/csv${version}/$m/
+
+    echo installing $kernel to $kerneldest
+    cp $kernel $kerneldest/kernel.o
+  '';
 
   meta = {
     description = "A powerful and incredibly fast R6RS Scheme compiler";
-    homepage    = "http://www.scheme.com";
+    homepage    = https://cisco.github.io/ChezScheme/;
     license     = stdenv.lib.licenses.asl20;
     platforms   = stdenv.lib.platforms.unix;
     maintainers = with stdenv.lib.maintainers; [ thoughtpolice ];
diff --git a/pkgs/development/compilers/compcert/default.nix b/pkgs/development/compilers/compcert/default.nix
index a12f1c42ba61..51392e23d8cf 100644
--- a/pkgs/development/compilers/compcert/default.nix
+++ b/pkgs/development/compilers/compcert/default.nix
@@ -7,11 +7,11 @@ assert lib.versionAtLeast ocamlPackages.ocaml.version "4.02";
 
 stdenv.mkDerivation rec {
   name    = "compcert-${version}";
-  version = "3.1";
+  version = "3.2";
 
   src = fetchurl {
     url    = "http://compcert.inria.fr/release/${name}.tgz";
-    sha256 = "0irfwlw2chalp0g2gw0makc699hn3z37sha1a239p9d90mzx03cx";
+    sha256 = "11q4121s0rxva63njjwya7syfx9w0p4hzr6avh8s57vfbrcakc93";
   };
 
   buildInputs = [ coq ]
@@ -19,8 +19,11 @@ stdenv.mkDerivation rec {
 
   enableParallelBuilding = true;
 
+  postPatch = ''
+    sed -i -e 's/8\.6\.1|8\.7\.0|8\.7\.1)/8.6.1|8.7.0|8.7.1|8.7.2)/' configure
+  '';
+
   configurePhase = ''
-    substituteInPlace VERSION --replace '3.0.1' '3.1'
     substituteInPlace ./configure --replace '{toolprefix}gcc' '{toolprefix}cc'
     ./configure -clightgen -prefix $out -toolprefix ${tools}/bin/ '' +
     (if stdenv.isDarwin then "x86_64-macosx" else "x86_64-linux");
diff --git a/pkgs/development/compilers/dmd/default.nix b/pkgs/development/compilers/dmd/default.nix
index de3544a3a638..094cdb06b698 100644
--- a/pkgs/development/compilers/dmd/default.nix
+++ b/pkgs/development/compilers/dmd/default.nix
@@ -3,9 +3,9 @@
 , curl, tzdata, gdb, darwin
 , callPackage
 , bootstrapVersion ? false
-, version ? "2.078.1"
-, dmdSha256 ? "0b9lphh4g3r9cyzv4wcfppv9j3w952vvwv615za23acgwav3mqg2"
-, druntimeSha256 ? "16jv40m073cflpkyl0vmg1g58cianybfcsgcvwli7pfryxbgsbrr"
+, version ? "2.078.2"
+, dmdSha256 ? "0x9q4aw4jl36dz7m5111y2sm8jdaj3zg36zhj6vqg1lqpdn3bhls"
+, druntimeSha256 ? "0nfqjcmwqc490bzi3582x1c3zigkf306g4nyd1cyd3vs8lfm6x66"
 , phobosSha256 ? "08ircpf4ilznz638kra272hz8fi5ccvw2cswj5hqckssl1lyqzs8"
 }:
 
@@ -111,7 +111,7 @@ let
     ''
 
     + stdenv.lib.optionalString stdenv.hostPlatform.isLinux ''
-        # See https://github.com/NixOS/nixpkgs/issues/29443
+        # See https://github.com/dlang/phobos/pull/5960
         substituteInPlace phobos/std/path.d \
             --replace "\"/root" "\"${ROOT_HOME_DIR}"
     '';
diff --git a/pkgs/development/compilers/gambit/default.nix b/pkgs/development/compilers/gambit/default.nix
index 01463f091c29..7466c85ca6ed 100644
--- a/pkgs/development/compilers/gambit/default.nix
+++ b/pkgs/development/compilers/gambit/default.nix
@@ -1,19 +1,20 @@
-{ stdenv, fetchurl, fetchgit, git, openssl, autoconf, pkgs }:
+{ stdenv, fetchurl, fetchgit, git, openssl, autoconf, pkgs, makeStaticLibraries }:
 
 # TODO: distinct packages for gambit-release and gambit-devel
 
 stdenv.mkDerivation rec {
   name    = "gambit-${version}";
-  version = "4.8.8-427-g37b111a5";
+  version = "4.8.8-435-gd1991ba7";
   bootstrap = import ./bootstrap.nix ( pkgs );
 
   src = fetchgit {
     url = "https://github.com/feeley/gambit.git";
-    rev = "37b111a5ca3aeff9dc6cb8be470277a8c1e80f24";
-    sha256 = "14l7jql9nh7bjs6c822a17rcp9583l6bb5kiq95allgyf229vy50";
+    rev = "d1991ba7e90ed0149964320f7cafa1a8289e61f0";
+    sha256 = "02harwcsqxxcxgn2yc1y9kyxdp32mampyvnbxrzg2jzfmnp5g6cm";
   };
 
-  buildInputs = [ openssl git autoconf bootstrap ];
+  # Use makeStaticLibraries to enable creation of statically linked binaries
+  buildInputs = [ git autoconf bootstrap openssl (makeStaticLibraries openssl)];
 
   configurePhase = ''
     options=(
diff --git a/pkgs/development/compilers/gcc/4.8/default.nix b/pkgs/development/compilers/gcc/4.8/default.nix
index 0105a159877a..36adfd075df2 100644
--- a/pkgs/development/compilers/gcc/4.8/default.nix
+++ b/pkgs/development/compilers/gcc/4.8/default.nix
@@ -169,7 +169,7 @@ let version = "4.8.5";
           # To keep ABI compatibility with upstream mingw-w64
           "--enable-fully-dynamic-string"
         ] else
-          optionals (targetPlatform.libc == "uclibc") [
+          optionals (targetPlatform.libc == "uclibc" || targetPlatform.libc == "musl") [
             # In uclibc cases, libgomp needs an additional '-ldl'
             # and as I don't know how to pass it, I disable libgomp.
             "--disable-libgomp"
diff --git a/pkgs/development/compilers/gcc/4.9/default.nix b/pkgs/development/compilers/gcc/4.9/default.nix
index 1b1492686d0e..c436da678fd9 100644
--- a/pkgs/development/compilers/gcc/4.9/default.nix
+++ b/pkgs/development/compilers/gcc/4.9/default.nix
@@ -160,7 +160,7 @@ let version = "4.9.4";
           # To keep ABI compatibility with upstream mingw-w64
           "--enable-fully-dynamic-string"
         ] else
-          optionals (targetPlatform.libc == "uclibc") [
+          optionals (targetPlatform.libc == "uclibc" || targetPlatform.libc == "musl") [
             # libsanitizer requires netrom/netrom.h which is not
             # available in uclibc.
             "--disable-libsanitizer"
diff --git a/pkgs/development/compilers/gcc/5/default.nix b/pkgs/development/compilers/gcc/5/default.nix
index 0636ce7381ae..b9ca8696d4e3 100644
--- a/pkgs/development/compilers/gcc/5/default.nix
+++ b/pkgs/development/compilers/gcc/5/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, targetPackages, fetchurl, noSysDirs
+{ stdenv, targetPackages, fetchurl, fetchpatch, noSysDirs
 , langC ? true, langCC ? true, langFortran ? false
 , langObjC ? targetPlatform.isDarwin
 , langObjCpp ? targetPlatform.isDarwin
@@ -74,7 +74,11 @@ let version = "5.5.0";
 
       # This could be applied unconditionally but I don't want to cause a full
       # Linux rebuild.
-      ++ optional stdenv.cc.isClang ./libcxx38-and-above.patch;
+      ++ optional stdenv.cc.isClang ./libcxx38-and-above.patch
+      ++ optional stdenv.hostPlatform.isMusl (fetchpatch {
+        url = https://raw.githubusercontent.com/richfelker/musl-cross-make/e84b1bd1fc12a3def33111ca6df522cd6e5ec361/patches/gcc-5.3.0/0001-musl.diff;
+        sha256 = "0pppbf8myi2kjhm3z3479ihn1cm60kycfv60gj8yy1bs0pl1qcfm";
+      });
 
     javaEcj = fetchurl {
       # The `$(top_srcdir)/ecj.jar' file is automatically picked up at
@@ -160,7 +164,7 @@ let version = "5.5.0";
           # To keep ABI compatibility with upstream mingw-w64
           "--enable-fully-dynamic-string"
         ] else
-          optionals (targetPlatform.libc == "uclibc") [
+          optionals (targetPlatform.libc == "uclibc" || targetPlatform.libc == "musl") [
             # libsanitizer requires netrom/netrom.h which is not
             # available in uclibc.
             "--disable-libsanitizer"
@@ -258,15 +262,22 @@ stdenv.mkDerivation ({
       let
         libc = if libcCross != null then libcCross else stdenv.cc.libc;
       in
-        '' echo "fixing the \`GLIBC_DYNAMIC_LINKER' and \`UCLIBC_DYNAMIC_LINKER' macros..."
+        (
+        '' echo "fixing the \`GLIBC_DYNAMIC_LINKER', \`UCLIBC_DYNAMIC_LINKER', and \`MUSL_DYNAMIC_LINKER' macros..."
            for header in "gcc/config/"*-gnu.h "gcc/config/"*"/"*.h
            do
-             grep -q LIBC_DYNAMIC_LINKER "$header" || continue
+             grep -q _DYNAMIC_LINKER "$header" || continue
              echo "  fixing \`$header'..."
              sed -i "$header" \
-                 -e 's|define[[:blank:]]*\([UCG]\+\)LIBC_DYNAMIC_LINKER\([0-9]*\)[[:blank:]]"\([^\"]\+\)"$|define \1LIBC_DYNAMIC_LINKER\2 "${libc.out}\3"|g'
+                 -e 's|define[[:blank:]]*\([UCG]\+\)LIBC_DYNAMIC_LINKER\([0-9]*\)[[:blank:]]"\([^\"]\+\)"$|define \1LIBC_DYNAMIC_LINKER\2 "${libc.out}\3"|g' \
+                 -e 's|define[[:blank:]]*MUSL_DYNAMIC_LINKER\([0-9]*\)[[:blank:]]"\([^\"]\+\)"$|define MUSL_DYNAMIC_LINKER\1 "${libc.out}\2"|g'
            done
         ''
+        + stdenv.lib.optionalString (targetPlatform.libc == "musl")
+        ''
+            sed -i gcc/config/linux.h -e '1i#undef LOCAL_INCLUDE_DIR'
+        ''
+        )
     else null;
 
   # TODO(@Ericson2314): Make passthru instead. Weird to avoid mass rebuild,
@@ -396,6 +407,7 @@ stdenv.mkDerivation ({
       # On Illumos/Solaris GNU as is preferred
       "--with-gnu-as" "--without-gnu-ld"
     ]
+    ++ optional (targetPlatform == hostPlatform && targetPlatform.libc == "musl") "--disable-libsanitizer"
   ;
 
   targetConfig = if targetPlatform != hostPlatform then targetPlatform.config else null;
diff --git a/pkgs/development/compilers/gcc/6/default.nix b/pkgs/development/compilers/gcc/6/default.nix
index 2614e96e1b7c..df0c1578daed 100644
--- a/pkgs/development/compilers/gcc/6/default.nix
+++ b/pkgs/development/compilers/gcc/6/default.nix
@@ -142,6 +142,9 @@ let version = "6.4.0";
         "--disable-shared"
         "--disable-libatomic"  # libatomic requires libc
         "--disable-decimal-float" # libdecnumber requires libc
+        # maybe only needed on musl, PATH_MAX
+        # https://github.com/richfelker/musl-cross-make/blob/0867cdf300618d1e3e87a0a939fa4427207ad9d7/litecross/Makefile#L62
+        "--disable-libmpx"
       ] else [
         (if crossDarwin then "--with-sysroot=${getLib libcCross}/share/sysroot"
          else                "--with-headers=${getDev libcCross}/include")
@@ -158,13 +161,15 @@ let version = "6.4.0";
           # To keep ABI compatibility with upstream mingw-w64
           "--enable-fully-dynamic-string"
         ] else
-          optionals (targetPlatform.libc == "uclibc") [
+          optionals (targetPlatform.libc == "uclibc" || targetPlatform.libc == "musl") [
             # libsanitizer requires netrom/netrom.h which is not
             # available in uclibc.
             "--disable-libsanitizer"
             # In uclibc cases, libgomp needs an additional '-ldl'
             # and as I don't know how to pass it, I disable libgomp.
             "--disable-libgomp"
+            # musl at least, disable: https://git.buildroot.net/buildroot/commit/?id=873d4019f7fb00f6a80592224236b3ba7d657865
+            "--disable-libmpx"
           ] ++ [
           "--enable-threads=posix"
           "--enable-nls"
@@ -257,15 +262,22 @@ stdenv.mkDerivation ({
       let
         libc = if libcCross != null then libcCross else stdenv.cc.libc;
       in
-        '' echo "fixing the \`GLIBC_DYNAMIC_LINKER' and \`UCLIBC_DYNAMIC_LINKER' macros..."
+        (
+        '' echo "fixing the \`GLIBC_DYNAMIC_LINKER', \`UCLIBC_DYNAMIC_LINKER', and \`MUSL_DYNAMIC_LINKER' macros..."
            for header in "gcc/config/"*-gnu.h "gcc/config/"*"/"*.h
            do
-             grep -q LIBC_DYNAMIC_LINKER "$header" || continue
+             grep -q _DYNAMIC_LINKER "$header" || continue
              echo "  fixing \`$header'..."
              sed -i "$header" \
-                 -e 's|define[[:blank:]]*\([UCG]\+\)LIBC_DYNAMIC_LINKER\([0-9]*\)[[:blank:]]"\([^\"]\+\)"$|define \1LIBC_DYNAMIC_LINKER\2 "${libc.out}\3"|g'
+                 -e 's|define[[:blank:]]*\([UCG]\+\)LIBC_DYNAMIC_LINKER\([0-9]*\)[[:blank:]]"\([^\"]\+\)"$|define \1LIBC_DYNAMIC_LINKER\2 "${libc.out}\3"|g' \
+                 -e 's|define[[:blank:]]*MUSL_DYNAMIC_LINKER\([0-9]*\)[[:blank:]]"\([^\"]\+\)"$|define MUSL_DYNAMIC_LINKER\1 "${libc.out}\2"|g'
            done
         ''
+        + stdenv.lib.optionalString (targetPlatform.libc == "musl")
+        ''
+            sed -i gcc/config/linux.h -e '1i#undef LOCAL_INCLUDE_DIR'
+        ''
+        )
     else null;
 
   # TODO(@Ericson2314): Make passthru instead. Weird to avoid mass rebuild,
@@ -399,6 +411,7 @@ stdenv.mkDerivation ({
       # On Illumos/Solaris GNU as is preferred
       "--with-gnu-as" "--without-gnu-ld"
     ]
+    ++ optional (targetPlatform == hostPlatform && targetPlatform.libc == "musl") "--disable-libsanitizer"
   ;
 
   targetConfig = if targetPlatform != hostPlatform then targetPlatform.config else null;
diff --git a/pkgs/development/compilers/gcc/6/fix-objdump-check.patch b/pkgs/development/compilers/gcc/6/fix-objdump-check.patch
new file mode 100644
index 000000000000..f9adbe9eb1ca
--- /dev/null
+++ b/pkgs/development/compilers/gcc/6/fix-objdump-check.patch
@@ -0,0 +1,43 @@
+commit 4c38abe0967bad78dd6baa61c86923e4d4b346d3
+Author: Ben Gamari <ben@smart-cactus.org>
+Date:   Sun Nov 5 13:14:19 2017 -0500
+
+    Fix it
+
+diff --git a/config/gcc-plugin.m4 b/config/gcc-plugin.m4
+index dd06a58..f4435b8 100644
+--- a/config/gcc-plugin.m4
++++ b/config/gcc-plugin.m4
+@@ -13,6 +13,32 @@ dnl the same distribution terms as the rest of that program.
+ # Sets the shell variables enable_plugin and pluginlibs.
+ AC_DEFUN([GCC_ENABLE_PLUGINS],
+   [# Check for plugin support
++
++   # Figure out what objdump we will be using.
++   AS_VAR_SET_IF(gcc_cv_objdump,, [
++   if test -f $gcc_cv_binutils_srcdir/configure.ac \
++        && test -f ../binutils/Makefile \
++        && test x$build = x$host; then
++   	# Single tree build which includes binutils.
++   	gcc_cv_objdump=../binutils/objdump$build_exeext
++   elif test -x objdump$build_exeext; then
++   	gcc_cv_objdump=./objdump$build_exeext
++   elif ( set dummy $OBJDUMP_FOR_TARGET; test -x $[2] ); then
++           gcc_cv_objdump="$OBJDUMP_FOR_TARGET"
++   else
++           AC_PATH_PROG(gcc_cv_objdump, $OBJDUMP_FOR_TARGET)
++   fi])
++   
++   AC_MSG_CHECKING(what objdump to use)
++   if test "$gcc_cv_objdump" = ../binutils/objdump$build_exeext; then
++   	# Single tree build which includes binutils.
++   	AC_MSG_RESULT(newly built objdump)
++   elif test x$gcc_cv_objdump = x; then
++   	AC_MSG_RESULT(not found)
++   else
++   	AC_MSG_RESULT($gcc_cv_objdump)
++   fi
++
+    AC_ARG_ENABLE(plugin,
+    [AS_HELP_STRING([--enable-plugin], [enable plugin support])],
+    enable_plugin=$enableval,
diff --git a/pkgs/development/compilers/gcc/7/default.nix b/pkgs/development/compilers/gcc/7/default.nix
index 0e5f69c27262..e8997b1efb06 100644
--- a/pkgs/development/compilers/gcc/7/default.nix
+++ b/pkgs/development/compilers/gcc/7/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, targetPackages, fetchurl, noSysDirs
+{ stdenv, targetPackages, fetchurl, fetchpatch, noSysDirs
 , langC ? true, langCC ? true, langFortran ? false
 , langObjC ? targetPlatform.isDarwin
 , langObjCpp ? targetPlatform.isDarwin
@@ -33,7 +33,6 @@
 , gnused ? null
 , cloog # unused; just for compat with gcc4, as we override the parameter on some places
 , darwin ? null
-, flex ? null
 , buildPlatform, hostPlatform, targetPlatform
 , buildPackages
 }:
@@ -67,6 +66,10 @@ let version = "7.3.0";
       [ ]
       ++ optional (targetPlatform != hostPlatform) ../libstdc++-target.patch
       ++ optional noSysDirs ../no-sys-dirs.patch
+      ++ optional (hostPlatform != buildPlatform) (fetchpatch { # XXX: Refine when this should be applied
+        url = "https://git.busybox.net/buildroot/plain/package/gcc/7.1.0/0900-remove-selftests.patch?id=11271540bfe6adafbc133caf6b5b902a816f5f02";
+        sha256 = "0mrvxsdwip2p3l17dscpc1x8vhdsciqw1z5q9i6p5g9yg1cqnmgs";
+      })
       # The GNAT Makefiles did not pay attention to CFLAGS_FOR_TARGET for its
       # target libraries and tools.
       ++ optional langAda ../gnat-cflags.patch
@@ -140,6 +143,9 @@ let version = "7.3.0";
         "--disable-shared"
         "--disable-libatomic"  # libatomic requires libc
         "--disable-decimal-float" # libdecnumber requires libc
+        # maybe only needed on musl, PATH_MAX
+        # https://github.com/richfelker/musl-cross-make/blob/0867cdf300618d1e3e87a0a939fa4427207ad9d7/litecross/Makefile#L62
+        "--disable-libmpx"
       ] else [
         (if crossDarwin then "--with-sysroot=${getLib libcCross}/share/sysroot"
          else                "--with-headers=${getDev libcCross}/include")
@@ -156,13 +162,15 @@ let version = "7.3.0";
           # To keep ABI compatibility with upstream mingw-w64
           "--enable-fully-dynamic-string"
         ] else
-          optionals (targetPlatform.libc == "uclibc") [
+          optionals (targetPlatform.libc == "uclibc" || targetPlatform.libc == "musl") [
             # libsanitizer requires netrom/netrom.h which is not
             # available in uclibc.
             "--disable-libsanitizer"
             # In uclibc cases, libgomp needs an additional '-ldl'
             # and as I don't know how to pass it, I disable libgomp.
             "--disable-libgomp"
+            # musl at least, disable: https://git.buildroot.net/buildroot/commit/?id=873d4019f7fb00f6a80592224236b3ba7d657865
+            "--disable-libmpx"
           ] ++ [
           "--enable-threads=posix"
           "--enable-nls"
@@ -254,15 +262,22 @@ stdenv.mkDerivation ({
       let
         libc = if libcCross != null then libcCross else stdenv.cc.libc;
       in
-        '' echo "fixing the \`GLIBC_DYNAMIC_LINKER' and \`UCLIBC_DYNAMIC_LINKER' macros..."
+        (
+        '' echo "fixing the \`GLIBC_DYNAMIC_LINKER', \`UCLIBC_DYNAMIC_LINKER', and \`MUSL_DYNAMIC_LINKER' macros..."
            for header in "gcc/config/"*-gnu.h "gcc/config/"*"/"*.h
            do
-             grep -q LIBC_DYNAMIC_LINKER "$header" || continue
+             grep -q _DYNAMIC_LINKER "$header" || continue
              echo "  fixing \`$header'..."
              sed -i "$header" \
-                 -e 's|define[[:blank:]]*\([UCG]\+\)LIBC_DYNAMIC_LINKER\([0-9]*\)[[:blank:]]"\([^\"]\+\)"$|define \1LIBC_DYNAMIC_LINKER\2 "${libc.out}\3"|g'
+                 -e 's|define[[:blank:]]*\([UCG]\+\)LIBC_DYNAMIC_LINKER\([0-9]*\)[[:blank:]]"\([^\"]\+\)"$|define \1LIBC_DYNAMIC_LINKER\2 "${libc.out}\3"|g' \
+                 -e 's|define[[:blank:]]*MUSL_DYNAMIC_LINKER\([0-9]*\)[[:blank:]]"\([^\"]\+\)"$|define MUSL_DYNAMIC_LINKER\1 "${libc.out}\2"|g'
            done
         ''
+        + stdenv.lib.optionalString (targetPlatform.libc == "musl")
+        ''
+            sed -i gcc/config/linux.h -e '1i#undef LOCAL_INCLUDE_DIR'
+        ''
+        )
     else null;
 
   # TODO(@Ericson2314): Make passthru instead. Weird to avoid mass rebuild,
@@ -284,7 +299,7 @@ stdenv.mkDerivation ({
     ];
 
   buildInputs = [
-    gmp mpfr libmpc libelf flex
+    gmp mpfr libmpc libelf
     targetPackages.stdenv.cc.bintools # For linking code at run-time
   ] ++ (optional (isl != null) isl)
     ++ (optional (zlib != null) zlib)
@@ -392,13 +407,13 @@ stdenv.mkDerivation ({
       # On Illumos/Solaris GNU as is preferred
       "--with-gnu-as" "--without-gnu-ld"
     ]
+    ++ optional (targetPlatform == hostPlatform && targetPlatform.libc == "musl") "--disable-libsanitizer"
   ;
 
   targetConfig = if targetPlatform != hostPlatform then targetPlatform.config else null;
 
-  buildFlags = if bootstrap then
-    (if profiledCompiler then "profiledbootstrap" else "bootstrap")
-    else "";
+  buildFlags =
+    optional bootstrap (if profiledCompiler then "profiledbootstrap" else "bootstrap");
 
   installTargets =
     if stripped
@@ -511,7 +526,7 @@ stdenv.mkDerivation ({
 }
 
 # Strip kills static libs of other archs (hence targetPlatform != hostPlatform)
-// optionalAttrs (!stripped || targetPlatform != hostPlatform) { dontStrip = true; NIX_STRIP_DEBUG = 0; }
+// optionalAttrs (!stripped || targetPlatform != hostPlatform) { dontStrip = true; }
 
 // optionalAttrs (enableMultilib) { dontMoveLib64 = true; }
 )
diff --git a/pkgs/development/compilers/gerbil/default.nix b/pkgs/development/compilers/gerbil/default.nix
index 9bd23aebfc43..f67582385e6f 100644
--- a/pkgs/development/compilers/gerbil/default.nix
+++ b/pkgs/development/compilers/gerbil/default.nix
@@ -1,24 +1,26 @@
-{ stdenv, fetchurl, fetchgit, gambit,
+{ stdenv, lib, fetchurl, fetchgit, makeStaticLibraries, gambit,
   coreutils, rsync, bash,
-  openssl, zlib, sqlite, libxml2, libyaml, mysql, lmdb, leveldb }:
+  openssl, zlib, sqlite, libxml2, libyaml, mysql, lmdb, leveldb, postgresql }:
 
 # TODO: distinct packages for gerbil-release and gerbil-devel
+# TODO: make static compilation work
 
 stdenv.mkDerivation rec {
   name    = "gerbil-${version}";
 
-  version = "0.12-DEV-1030-gbbed3bc";
+  version = "0.12-DEV-1404-g0a266db";
   src = fetchgit {
     url = "https://github.com/vyzo/gerbil.git";
-    rev = "bbed3bc4cf7bcaa64eaabdf097192bfcc2bfc928";
-    sha256 = "1dc0j143j860yq72lfjp71fin7hpsy1426azz7rl1szxvjfb7h4r";
+    rev = "0a266db5e2e241272711bc150cc2607204bf2b78";
+    sha256 = "1lvawqn8havfyxkkgfqffc213zq2pgm179l42yj49fy3fhpzia4m";
   };
 
-  buildInputs = [
-    gambit
-    coreutils rsync bash
-    openssl zlib sqlite libxml2 libyaml mysql.connector-c lmdb leveldb
-  ];
+  # Use makeStaticLibraries to enable creation of statically linked binaries
+  buildInputs_libraries = [ openssl zlib sqlite libxml2 libyaml mysql.connector-c lmdb leveldb postgresql ];
+  buildInputs_staticLibraries = map makeStaticLibraries buildInputs_libraries;
+
+  buildInputs = [ gambit coreutils rsync bash ]
+    ++ buildInputs_libraries ++ buildInputs_staticLibraries;
 
   NIX_CFLAGS_COMPILE = [ "-I${mysql.connector-c}/include/mysql" "-L${mysql.connector-c}/lib/mysql" ];
 
@@ -30,6 +32,18 @@ stdenv.mkDerivation rec {
     find . -type f -executable -print0 | while IFS= read -r -d ''$'\0' f; do
       substituteInPlace "$f" --replace '#!/usr/bin/env' '#!${coreutils}/bin/env'
     done
+
+    cat > etc/gerbil_static_libraries.sh <<EOF
+#OPENSSL_LIBCRYPTO=${makeStaticLibraries openssl}/lib/libcrypto.a # MISSING!
+#OPENSSL_LIBSSL=${makeStaticLibraries openssl}/lib/libssl.a # MISSING!
+ZLIB=${makeStaticLibraries zlib}/lib/libz.a
+# SQLITE=${makeStaticLibraries sqlite}/lib/sqlite.a # MISSING!
+# LIBXML2=${makeStaticLibraries libxml2}/lib/libxml2.a # MISSING!
+# YAML=${makeStaticLibraries libyaml}/lib/libyaml.a # MISSING!
+MYSQL=${makeStaticLibraries mysql.connector-c}/lib/mariadb/libmariadb.a
+# LMDB=${makeStaticLibraries lmdb}/lib/mysql/libmysqlclient_r.a # MISSING!
+LEVELDB=${makeStaticLibraries lmdb}/lib/libleveldb.a
+EOF
   '';
 
   buildPhase = ''
diff --git a/pkgs/development/compilers/ghc/8.2.2.nix b/pkgs/development/compilers/ghc/8.2.2.nix
index 8b62bbffcc84..f4aa2de3241e 100644
--- a/pkgs/development/compilers/ghc/8.2.2.nix
+++ b/pkgs/development/compilers/ghc/8.2.2.nix
@@ -26,6 +26,10 @@
     !(targetPlatform.isDarwin
       # On iOS, dynamic linking is not supported
       && (targetPlatform.isAarch64 || targetPlatform.isArm))
+, # Whether to backport https://phabricator.haskell.org/D4388 for
+  # deterministic profiling symbol names, at the cost of a slightly
+  # non-standard GHC API
+  deterministicProfiling ? false
 }:
 
 assert !enableIntegerSimple -> gmp != null;
@@ -85,7 +89,11 @@ stdenv.mkDerivation rec {
       url = "https://git.haskell.org/ghc.git/commitdiff_plain/2fc8ce5f0c8c81771c26266ac0b150ca9b75c5f3";
       sha256 = "03253ci40np1v6k0wmi4aypj3nmj3rdyvb1k6rwqipb30nfc719f";
     })
-  ];
+  ] ++ stdenv.lib.optional deterministicProfiling
+    (fetchpatch { # Backport of https://phabricator.haskell.org/D4388 for more determinism
+      url = "https://github.com/shlevy/ghc/commit/fec1b8d3555c447c0d8da0e96b659be67c8bb4bc.patch";
+      sha256 = "1lyysz6hfd1njcigpm8xppbnkadqfs0kvrp7s8vqgb38pjswj5hg";
+    });
 
   postPatch = "patchShebangs .";
 
diff --git a/pkgs/development/compilers/ghc/8.4.1.nix b/pkgs/development/compilers/ghc/8.4.1.nix
index 17dc24e567f4..e7ec9be16b69 100644
--- a/pkgs/development/compilers/ghc/8.4.1.nix
+++ b/pkgs/development/compilers/ghc/8.4.1.nix
@@ -3,7 +3,7 @@
 
 # build-tools
 , bootPkgs, alex, happy
-, autoconf, automake, coreutils, fetchgit, perl, python3
+, autoconf, automake, coreutils, fetchgit, fetchpatch, perl, python3
 
 , libffi, libiconv ? null, ncurses
 
@@ -24,7 +24,11 @@
   # platform). Static libs are always built.
   enableShared ? true
 
-, version ? "8.4.20180122"
+, version ? "8.4.0.20180204"
+, # Whether to backport https://phabricator.haskell.org/D4388 for
+  # deterministic profiling symbol names, at the cost of a slightly
+  # non-standard GHC API
+  deterministicProfiling ? false
 }:
 
 assert !enableIntegerSimple -> gmp != null;
@@ -73,14 +77,20 @@ stdenv.mkDerivation rec {
 
   src = fetchgit {
     url = "git://git.haskell.org/ghc.git";
-    rev = "61db0b8941cfb7ed8941ed29bdb04bd8ef3b71a5";
-    sha256 = "15sbpgkal4854jc1xn3sprvpnxwdj0fyy43y5am0h9vja3pjhjyi";
+    rev = "111737cd218751f06ea58d3cf2c7c144265b5dfc";
+    sha256 = "0ksp0k3sp928aq2cv6whgbfmjnr7l2j10diha13nncksp4byf0s9";
   };
 
   enableParallelBuilding = true;
 
   outputs = [ "out" "doc" ];
 
+  patches = stdenv.lib.optional deterministicProfiling
+    (fetchpatch { # https://phabricator.haskell.org/D4388 for more determinism
+      url = "https://github.com/shlevy/ghc/commit/8b2dbd869d1a64de3e99fa8b1c9bb1140eee7099.patch";
+      sha256 = "0hxpiwhbg64rsyjdr4psh6dwyp58b96mad3adccvfr0x8hc6ba2m";
+    });
+
   postPatch = "patchShebangs .";
 
   # GHC is a bit confused on its cross terminology.
diff --git a/pkgs/development/compilers/go/1.6.nix b/pkgs/development/compilers/go/1.6.nix
deleted file mode 100644
index 0eebc92ee594..000000000000
--- a/pkgs/development/compilers/go/1.6.nix
+++ /dev/null
@@ -1,168 +0,0 @@
-{ stdenv, lib, fetchurl, tzdata, iana-etc, go_bootstrap, runCommand
-, perl, which, pkgconfig, patch, fetchpatch
-, pcre
-, Security, Foundation, bash }:
-
-let
-  goBootstrap = runCommand "go-bootstrap" {} ''
-    mkdir $out
-    cp -rf ${go_bootstrap}/* $out/
-    chmod -R u+w $out
-    find $out -name "*.c" -delete
-    cp -rf $out/bin/* $out/share/go/bin/
-  '';
-in
-
-stdenv.mkDerivation rec {
-  name = "go-${version}";
-  version = "1.6.4";
-
-  src = fetchurl {
-    url = "https://github.com/golang/go/archive/go${version}.tar.gz";
-    sha256 = "1212pijypippg3sq9c9645kskq4ib73y1f8cv0ka6n279smk0mq9";
-  };
-
-  # perl is used for testing go vet
-  nativeBuildInputs = [ perl which pkgconfig patch ];
-  buildInputs = [ pcre ];
-  propagatedBuildInputs = lib.optionals stdenv.isDarwin [
-    Security Foundation
-  ];
-
-  hardeningDisable = [ "all" ];
-
-  # I'm not sure what go wants from its 'src', but the go installation manual
-  # describes an installation keeping the src.
-  preUnpack = ''
-    topdir=$PWD
-    mkdir -p $out/share
-    cd $out/share
-  '';
-
-  prePatch = ''
-    # Ensure that the source directory is named go
-    cd ..
-    if [ ! -d go ]; then
-      mv * go
-    fi
-
-    cd go
-    patchShebangs ./ # replace /bin/bash
-
-    # This script produces another script at run time,
-    # and thus it is not corrected by patchShebangs.
-    substituteInPlace misc/cgo/testcarchive/test.bash \
-      --replace '#!/usr/bin/env bash' '#!${stdenv.shell}'
-
-    # Disabling the 'os/http/net' tests (they want files not available in
-    # chroot builds)
-    rm src/net/{listen,parse}_test.go
-    rm src/syscall/exec_linux_test.go
-    # !!! substituteInPlace does not seems to be effective.
-    # The os test wants to read files in an existing path. Just don't let it be /usr/bin.
-    sed -i 's,/usr/bin,'"`pwd`", src/os/os_test.go
-    sed -i 's,/bin/pwd,'"`type -P pwd`", src/os/os_test.go
-    # Disable the unix socket test
-    sed -i '/TestShutdownUnix/areturn' src/net/net_test.go
-    # Disable the hostname test
-    sed -i '/TestHostname/areturn' src/os/os_test.go
-    # ParseInLocation fails the test
-    sed -i '/TestParseInSydney/areturn' src/time/format_test.go
-    # Remove the api check as it never worked
-    sed -i '/src\/cmd\/api\/run.go/ireturn nil' src/cmd/dist/test.go
-    # Remove the coverage test as we have removed this utility
-    sed -i '/TestCoverageWithCgo/areturn' src/cmd/go/go_test.go
-    # Remove the timezone naming test
-    sed -i '/TestLoadFixed/areturn' src/time/time_test.go
-
-    sed -i 's,/etc/protocols,${iana-etc}/etc/protocols,' src/net/lookup_unix.go
-    sed -i 's,/etc/services,${iana-etc}/etc/services,' src/net/port_unix.go
-  '' + lib.optionalString stdenv.isLinux ''
-    sed -i 's,/usr/share/zoneinfo/,${tzdata}/share/zoneinfo/,' src/time/zoneinfo_unix.go
-  '' + lib.optionalString stdenv.isDarwin ''
-    substituteInPlace src/race.bash --replace \
-      "sysctl machdep.cpu.extfeatures | grep -qv EM64T" true
-    sed -i 's,strings.Contains(.*sysctl.*,true {,' src/cmd/dist/util.go
-    sed -i 's,"/etc","'"$TMPDIR"'",' src/os/os_test.go
-    sed -i 's,/_go_os_test,'"$TMPDIR"'/_go_os_test,' src/os/path_test.go
-    sed -i '/TestCgoLookupIP/areturn' src/net/cgo_unix_test.go
-    sed -i '/TestChdirAndGetwd/areturn' src/os/os_test.go
-    sed -i '/TestRead0/areturn' src/os/os_test.go
-    sed -i '/TestNohup/areturn' src/os/signal/signal_test.go
-    rm src/crypto/x509/root_darwin_test.go src/crypto/x509/verify_test.go
-
-    sed -i '/TestGoInstallRebuildsStalePackagesInOtherGOPATH/areturn' src/cmd/go/go_test.go
-    sed -i '/TestBuildDashIInstallsDependencies/areturn' src/cmd/go/go_test.go
-
-    sed -i '/TestDisasmExtld/areturn' src/cmd/objdump/objdump_test.go
-
-    touch $TMPDIR/group $TMPDIR/hosts $TMPDIR/passwd
-
-    sed -i '1 a\exit 0' misc/cgo/errors/test.bash
-
-    mkdir $topdir/dirtyhacks
-    cat <<EOF > $topdir/dirtyhacks/clang
-    #!${bash}/bin/bash
-    $(type -P clang) "\$@" 2> >(sed '/ld: warning:.*ignoring unexpected dylib file/ d' 1>&2)
-    exit $?
-    EOF
-    chmod +x $topdir/dirtyhacks/clang
-    PATH=$topdir/dirtyhacks:$PATH
-  '';
-
-  patches = [
-    ./remove-tools-1.5.patch
-    ./creds-test.patch
-    ./fix-systime-1.6.patch
-
-    # This test checks for the wrong thing with recent tzdata. It's been fixed in master but the patch
-    # actually works on old versions too.
-    (fetchpatch {
-      url    = "https://github.com/golang/go/commit/91563ced5897faf729a34be7081568efcfedda31.patch";
-      sha256 = "1ny5l3f8a9dpjjrnjnsplb66308a0x13sa0wwr4j6yrkc8j4qxqi";
-    })
-  ];
-
-  GOOS = if stdenv.isDarwin then "darwin" else "linux";
-  GOARCH = if stdenv.isDarwin then "amd64"
-           else if stdenv.system == "i686-linux" then "386"
-           else if stdenv.system == "x86_64-linux" then "amd64"
-           else if stdenv.isArm then "arm"
-           else if stdenv.isAarch64 then "arm64"
-           else throw "Unsupported system";
-  GOARM = stdenv.lib.optionalString (stdenv.system == "armv5tel-linux") "5";
-  GO386 = 387; # from Arch: don't assume sse2 on i686
-  CGO_ENABLED = 1;
-  GOROOT_BOOTSTRAP = "${goBootstrap}/share/go";
-
-  # The go build actually checks for CC=*/clang and does something different, so we don't
-  # just want the generic `cc` here.
-  CC = if stdenv.isDarwin then "clang" else "cc";
-
-  installPhase = ''
-    mkdir -p "$out/bin"
-    export GOROOT="$(pwd)/"
-    export GOBIN="$out/bin"
-    export PATH="$GOBIN:$PATH"
-    cd ./src
-    echo Building
-    ./all.bash
-  '';
-
-  preFixup = ''
-    rm -r $out/share/go/pkg/bootstrap
-  '';
-
-  setupHook = ./setup-hook.sh;
-
-  disallowedReferences = [ go_bootstrap ];
-
-  meta = with stdenv.lib; {
-    branch = "1.6";
-    homepage = http://golang.org/;
-    description = "The Go Programming language";
-    license = licenses.bsd3;
-    maintainers = with maintainers; [ cstrahan wkennington ];
-    platforms = platforms.linux ++ platforms.darwin;
-  };
-}
diff --git a/pkgs/development/compilers/go/1.7.nix b/pkgs/development/compilers/go/1.7.nix
deleted file mode 100644
index 82ed9b53c60f..000000000000
--- a/pkgs/development/compilers/go/1.7.nix
+++ /dev/null
@@ -1,168 +0,0 @@
-{ stdenv, fetchFromGitHub, tzdata, iana-etc, go_bootstrap, runCommand, writeScriptBin
-, perl, which, pkgconfig, patch, fetchpatch
-, pcre, cacert
-, Security, Foundation, bash }:
-
-let
-
-  inherit (stdenv.lib) optional optionals optionalString;
-
-  clangHack = writeScriptBin "clang" ''
-    #!${stdenv.shell}
-    exec ${stdenv.cc}/bin/clang "$@" 2> >(sed '/ld: warning:.*ignoring unexpected dylib file/ d' 1>&2)
-  '';
-
-  goBootstrap = runCommand "go-bootstrap" {} ''
-    mkdir $out
-    cp -rf ${go_bootstrap}/* $out/
-    chmod -R u+w $out
-    find $out -name "*.c" -delete
-    cp -rf $out/bin/* $out/share/go/bin/
-  '';
-
-in
-
-stdenv.mkDerivation rec {
-  name = "go-${version}";
-  version = "1.7.6";
-
-  src = fetchFromGitHub {
-    owner = "golang";
-    repo = "go";
-    rev = "go${version}";
-    sha256 = "1gacjwbs1qbx8x84746qdxx2xwylirvd31ybgagfglfsl77vi4m2";
-  };
-
-  # perl is used for testing go vet
-  nativeBuildInputs = [ perl which pkgconfig patch ];
-  buildInputs = [ cacert pcre ];
-  propagatedBuildInputs = optionals stdenv.isDarwin [ Security Foundation ];
-
-  hardeningDisable = [ "all" ];
-
-  prePatch = ''
-    patchShebangs ./ # replace /bin/bash
-
-    # This source produces shell script at run time,
-    # and thus it is not corrected by patchShebangs.
-    substituteInPlace misc/cgo/testcarchive/carchive_test.go \
-      --replace '#!/usr/bin/env bash' '#!${stdenv.shell}'
-
-    # Disabling the 'os/http/net' tests (they want files not available in
-    # chroot builds)
-    rm src/net/{listen,parse}_test.go
-    rm src/syscall/exec_linux_test.go
-    # !!! substituteInPlace does not seems to be effective.
-    # The os test wants to read files in an existing path. Just don't let it be /usr/bin.
-    sed -i 's,/usr/bin,'"`pwd`", src/os/os_test.go
-    sed -i 's,/bin/pwd,'"`type -P pwd`", src/os/os_test.go
-    # Disable the unix socket test
-    sed -i '/TestShutdownUnix/areturn' src/net/net_test.go
-    # Disable the hostname test
-    sed -i '/TestHostname/areturn' src/os/os_test.go
-    # ParseInLocation fails the test
-    sed -i '/TestParseInSydney/areturn' src/time/format_test.go
-    # Remove the api check as it never worked
-    sed -i '/src\/cmd\/api\/run.go/ireturn nil' src/cmd/dist/test.go
-    # Remove the coverage test as we have removed this utility
-    sed -i '/TestCoverageWithCgo/areturn' src/cmd/go/go_test.go
-    # Remove the timezone naming test
-    sed -i '/TestLoadFixed/areturn' src/time/time_test.go
-
-    sed -i 's,/etc/protocols,${iana-etc}/etc/protocols,' src/net/lookup_unix.go
-    sed -i 's,/etc/services,${iana-etc}/etc/services,' src/net/port_unix.go
-
-    # Disable cgo lookup tests not works, they depend on resolver
-    rm src/net/cgo_unix_test.go
-
-  '' + optionalString stdenv.isLinux ''
-    sed -i 's,/usr/share/zoneinfo/,${tzdata}/share/zoneinfo/,' src/time/zoneinfo_unix.go
-  '' + optionalString stdenv.isDarwin ''
-    substituteInPlace src/race.bash --replace \
-      "sysctl machdep.cpu.extfeatures | grep -qv EM64T" true
-    sed -i 's,strings.Contains(.*sysctl.*,true {,' src/cmd/dist/util.go
-    sed -i 's,"/etc","'"$TMPDIR"'",' src/os/os_test.go
-    sed -i 's,/_go_os_test,'"$TMPDIR"'/_go_os_test,' src/os/path_test.go
-
-    sed -i '/TestChdirAndGetwd/areturn' src/os/os_test.go
-    sed -i '/TestRead0/areturn' src/os/os_test.go
-    sed -i '/TestNohup/areturn' src/os/signal/signal_test.go
-    sed -i '/TestCurrent/areturn' src/os/user/user_test.go
-    sed -i '/TestSystemRoots/areturn' src/crypto/x509/root_darwin_test.go
-
-    sed -i '/TestGoInstallRebuildsStalePackagesInOtherGOPATH/areturn' src/cmd/go/go_test.go
-    sed -i '/TestBuildDashIInstallsDependencies/areturn' src/cmd/go/go_test.go
-
-    sed -i '/TestDisasmExtld/areturn' src/cmd/objdump/objdump_test.go
-
-    sed -i 's/unrecognized/unknown/' src/cmd/link/internal/ld/lib.go
-    sed -i 's/unrecognized/unknown/' src/cmd/go/build.go
-
-    touch $TMPDIR/group $TMPDIR/hosts $TMPDIR/passwd
-
-    sed -i '1 a\exit 0' misc/cgo/errors/test.bash
-  '';
-
-  patches =
-    [ ./remove-tools-1.7.patch
-      ./ssl-cert-file.patch
-      ./creds-test.patch
-
-      # This test checks for the wrong thing with recent tzdata. It's been fixed in master but the patch
-      # actually works on old versions too.
-      (fetchpatch {
-        url    = "https://github.com/golang/go/commit/91563ced5897faf729a34be7081568efcfedda31.patch";
-        sha256 = "1ny5l3f8a9dpjjrnjnsplb66308a0x13sa0wwr4j6yrkc8j4qxqi";
-      })
-    ];
-
-  GOOS = if stdenv.isDarwin then "darwin" else "linux";
-  GOARCH = if stdenv.isDarwin then "amd64"
-           else if stdenv.system == "i686-linux" then "386"
-           else if stdenv.system == "x86_64-linux" then "amd64"
-           else if stdenv.isArm then "arm"
-           else if stdenv.isAarch64 then "arm64"
-           else throw "Unsupported system";
-  GOARM = optionalString (stdenv.system == "armv5tel-linux") "5";
-  GO386 = 387; # from Arch: don't assume sse2 on i686
-  CGO_ENABLED = 1;
-  GOROOT_BOOTSTRAP = "${goBootstrap}/share/go";
-
-  # The go build actually checks for CC=*/clang and does something different, so we don't
-  # just want the generic `cc` here.
-  CC = if stdenv.isDarwin then "clang" else "cc";
-
-  configurePhase = ''
-    mkdir -p $out/share/go/bin
-    export GOROOT=$out/share/go
-    export GOBIN=$GOROOT/bin
-    export PATH=$GOBIN:$PATH
-  '';
-
-  postConfigure = optionalString stdenv.isDarwin ''
-    export PATH=${clangHack}/bin:$PATH
-  '';
-
-  installPhase = ''
-    cp -r . $GOROOT
-    ( cd $GOROOT/src && ./all.bash )
-  '';
-
-  preFixup = ''
-    rm -r $out/share/go/pkg/bootstrap
-    ln -s $out/share/go/bin $out/bin
-  '';
-
-  setupHook = ./setup-hook.sh;
-
-  disallowedReferences = [ go_bootstrap ];
-
-  meta = with stdenv.lib; {
-    branch = "1.7";
-    homepage = http://golang.org/;
-    description = "The Go Programming language";
-    license = licenses.bsd3;
-    maintainers = with maintainers; [ cstrahan wkennington ];
-    platforms = platforms.linux ++ platforms.darwin;
-  };
-}
diff --git a/pkgs/development/compilers/go/1.8.nix b/pkgs/development/compilers/go/1.8.nix
index ee71d2aabad6..7775a17a646c 100644
--- a/pkgs/development/compilers/go/1.8.nix
+++ b/pkgs/development/compilers/go/1.8.nix
@@ -25,20 +25,21 @@ in
 
 stdenv.mkDerivation rec {
   name = "go-${version}";
-  version = "1.8.5";
+  version = "1.8.7";
 
   src = fetchFromGitHub {
     owner = "golang";
     repo = "go";
     rev = "go${version}";
-    sha256 = "1ab021l3v29ciaxp738cjpbkh1chlsl6928672q3i82anmdzn5m5";
+    sha256 = "06v83fb75079dy2dc1927sr9bwvcpkkzl9d4wcw10scj70vj4a0x";
   };
 
   # perl is used for testing go vet
   nativeBuildInputs = [ perl which pkgconfig patch makeWrapper ]
     ++ optionals stdenv.isLinux [ procps ];
   buildInputs = [ cacert pcre ]
-    ++ optionals stdenv.isLinux [ stdenv.glibc.out stdenv.glibc.static ];
+    ++ optionals stdenv.isLinux [ stdenv.cc.libc.out ]
+    ++ optionals (stdenv.hostPlatform.libc == "glibc") [ stdenv.cc.libc.static ];
   propagatedBuildInputs = optionals stdenv.isDarwin [ Security Foundation ];
 
   hardeningDisable = [ "all" ];
diff --git a/pkgs/development/compilers/go/1.9.nix b/pkgs/development/compilers/go/1.9.nix
index b226cd7a7ebc..f1017d4a48c4 100644
--- a/pkgs/development/compilers/go/1.9.nix
+++ b/pkgs/development/compilers/go/1.9.nix
@@ -25,20 +25,21 @@ in
 
 stdenv.mkDerivation rec {
   name = "go-${version}";
-  version = "1.9.3";
+  version = "1.9.4";
 
   src = fetchFromGitHub {
     owner = "golang";
     repo = "go";
     rev = "go${version}";
-    sha256 = "0ivb6z30d6qrrkwjm9fdz9jfs567q4b6dljwwxc9shmdr2l9chah";
+    sha256 = "15d9lfiy1cjfz6nqnig5884ykqckx58cynd1bva1xna7bwcwwp2r";
   };
 
   # perl is used for testing go vet
   nativeBuildInputs = [ perl which pkgconfig patch makeWrapper ]
     ++ optionals stdenv.isLinux [ procps ];
   buildInputs = [ cacert pcre ]
-    ++ optionals stdenv.isLinux [ stdenv.glibc.out stdenv.glibc.static ];
+    ++ optionals stdenv.isLinux [ stdenv.cc.libc.out ]
+    ++ optionals (stdenv.hostPlatform.libc == "glibc") [ stdenv.cc.libc.static ];
   propagatedBuildInputs = optionals stdenv.isDarwin [ Security Foundation ];
 
   hardeningDisable = [ "all" ];
diff --git a/pkgs/development/compilers/go/fix-systime-1.6.patch b/pkgs/development/compilers/go/fix-systime-1.6.patch
deleted file mode 100644
index e4a3932001e5..000000000000
--- a/pkgs/development/compilers/go/fix-systime-1.6.patch
+++ /dev/null
@@ -1,45 +0,0 @@
-diff --git a/src/runtime/sys_darwin_amd64.s b/src/runtime/sys_darwin_amd64.s
-index e09b906ba5..fa8ff2f65c 100644
---- a/src/runtime/sys_darwin_amd64.s
-+++ b/src/runtime/sys_darwin_amd64.s
-@@ -157,6 +157,7 @@ systime:
- 	// Fall back to system call (usually first call in this thread).
- 	MOVQ	SP, DI
- 	MOVQ	$0, SI
-+	MOVQ	$0, DX  // required as of Sierra; Issue 16570
- 	MOVL	$(0x2000000+116), AX
- 	SYSCALL
- 	CMPQ	AX, $0
-diff --git a/src/syscall/syscall_darwin_amd64.go b/src/syscall/syscall_darwin_amd64.go
-index 70b53b87f4..79083117b6 100644
---- a/src/syscall/syscall_darwin_amd64.go
-+++ b/src/syscall/syscall_darwin_amd64.go
-@@ -26,14 +26,21 @@ func NsecToTimeval(nsec int64) (tv Timeval) {
- }
- 
- //sysnb	gettimeofday(tp *Timeval) (sec int64, usec int32, err error)
--func Gettimeofday(tv *Timeval) (err error) {
--	// The tv passed to gettimeofday must be non-nil
--	// but is otherwise unused.  The answers come back
--	// in the two registers.
-+func Gettimeofday(tv *Timeval) error {
-+	// The tv passed to gettimeofday must be non-nil.
-+	// Before macOS Sierra (10.12), tv was otherwise unused and
-+	// the answers came back in the two registers.
-+	// As of Sierra, gettimeofday return zeros and populates
-+	// tv itself.
- 	sec, usec, err := gettimeofday(tv)
--	tv.Sec = sec
--	tv.Usec = usec
--	return err
-+	if err != nil {
-+		return err
-+	}
-+	if sec != 0 || usec != 0 {
-+		tv.Sec = sec
-+		tv.Usec = usec
-+	}
-+	return nil
- }
- 
- func SetKevent(k *Kevent_t, fd, mode, flags int) {
diff --git a/pkgs/development/compilers/go/new-binutils.patch b/pkgs/development/compilers/go/new-binutils.patch
deleted file mode 100644
index a547e3ab9b9a..000000000000
--- a/pkgs/development/compilers/go/new-binutils.patch
+++ /dev/null
@@ -1,194 +0,0 @@
-https://github.com/golang/go/issues/13114
-https://gnats.netbsd.org/50777
-
---- a/src/cmd/6l/asm.c	2015-09-23 06:20:05.000000000 +0200
-+++ b/src/cmd/6l/asm.c	2016-03-10 21:00:29.032083210 +0100
-@@ -118,6 +118,8 @@
- 		return;
- 	
- 	case 256 + R_X86_64_GOTPCREL:
-+	case 256 + R_X86_64_GOTPCRELX:
-+	case 256 + R_X86_64_REX_GOTPCRELX:
- 		if(targ->type != SDYNIMPORT) {
- 			// have symbol
- 			if(r->off >= 2 && s->p[r->off-2] == 0x8b) {
---- a/src/cmd/8l/asm.c	2015-09-23 06:20:05.000000000 +0200
-+++ b/src/cmd/8l/asm.c	2016-03-10 21:02:16.702064080 +0100
-@@ -115,6 +115,7 @@
- 		return;		
- 	
- 	case 256 + R_386_GOT32:
-+	case 256 + R_386_GOT32X:
- 		if(targ->type != SDYNIMPORT) {
- 			// have symbol
- 			if(r->off >= 2 && s->p[r->off-2] == 0x8b) {
---- a/src/cmd/ld/elf.h	2015-09-23 06:20:05.000000000 +0200
-+++ b/src/cmd/ld/elf.h	2016-03-10 21:00:29.033083211 +0100
-@@ -478,32 +478,47 @@
-  * Relocation types.
-  */
- 
--#define	R_X86_64_NONE	0	/* No relocation. */
--#define	R_X86_64_64	1	/* Add 64 bit symbol value. */
--#define	R_X86_64_PC32	2	/* PC-relative 32 bit signed sym value. */
--#define	R_X86_64_GOT32	3	/* PC-relative 32 bit GOT offset. */
--#define	R_X86_64_PLT32	4	/* PC-relative 32 bit PLT offset. */
--#define	R_X86_64_COPY	5	/* Copy data from shared object. */
--#define	R_X86_64_GLOB_DAT 6	/* Set GOT entry to data address. */
--#define	R_X86_64_JMP_SLOT 7	/* Set GOT entry to code address. */
--#define	R_X86_64_RELATIVE 8	/* Add load address of shared object. */
--#define	R_X86_64_GOTPCREL 9	/* Add 32 bit signed pcrel offset to GOT. */
--#define	R_X86_64_32	10	/* Add 32 bit zero extended symbol value */
--#define	R_X86_64_32S	11	/* Add 32 bit sign extended symbol value */
--#define	R_X86_64_16	12	/* Add 16 bit zero extended symbol value */
--#define	R_X86_64_PC16	13	/* Add 16 bit signed extended pc relative symbol value */
--#define	R_X86_64_8	14	/* Add 8 bit zero extended symbol value */
--#define	R_X86_64_PC8	15	/* Add 8 bit signed extended pc relative symbol value */
--#define	R_X86_64_DTPMOD64 16	/* ID of module containing symbol */
--#define	R_X86_64_DTPOFF64 17	/* Offset in TLS block */
--#define	R_X86_64_TPOFF64 18	/* Offset in static TLS block */
--#define	R_X86_64_TLSGD	19	/* PC relative offset to GD GOT entry */
--#define	R_X86_64_TLSLD	20	/* PC relative offset to LD GOT entry */
--#define	R_X86_64_DTPOFF32 21	/* Offset in TLS block */
--#define	R_X86_64_GOTTPOFF 22	/* PC relative offset to IE GOT entry */
--#define	R_X86_64_TPOFF32 23	/* Offset in static TLS block */
--
--#define	R_X86_64_COUNT	24	/* Count of defined relocation types. */
-+#define	R_X86_64_NONE           0
-+#define	R_X86_64_64             1
-+#define	R_X86_64_PC32           2
-+#define	R_X86_64_GOT32          3
-+#define	R_X86_64_PLT32          4
-+#define	R_X86_64_COPY           5
-+#define	R_X86_64_GLOB_DAT       6
-+#define	R_X86_64_JMP_SLOT       7
-+#define	R_X86_64_RELATIVE       8
-+#define	R_X86_64_GOTPCREL       9
-+#define	R_X86_64_32             10
-+#define	R_X86_64_32S            11
-+#define	R_X86_64_16             12
-+#define	R_X86_64_PC16           13
-+#define	R_X86_64_8              14
-+#define	R_X86_64_PC8            15
-+#define	R_X86_64_DTPMOD64       16
-+#define	R_X86_64_DTPOFF64       17
-+#define	R_X86_64_TPOFF64        18
-+#define	R_X86_64_TLSGD          19
-+#define	R_X86_64_TLSLD          20
-+#define	R_X86_64_DTPOFF32       21
-+#define	R_X86_64_GOTTPOFF       22
-+#define	R_X86_64_TPOFF32        23
-+#define	R_X86_64_PC64           24
-+#define	R_X86_64_GOTOFF64       25
-+#define	R_X86_64_GOTPC32        26
-+#define	R_X86_64_GOT64          27
-+#define	R_X86_64_GOTPCREL64     28
-+#define	R_X86_64_GOTPC64        29
-+#define	R_X86_64_GOTPLT64       30
-+#define	R_X86_64_PLTOFF64       31
-+#define	R_X86_64_SIZE32         32
-+#define	R_X86_64_SIZE64         33
-+#define	R_X86_64_GOTPC32_TLSDEC 34
-+#define	R_X86_64_TLSDESC_CALL   35
-+#define	R_X86_64_TLSDESC        36
-+#define	R_X86_64_IRELATIVE      37
-+#define	R_X86_64_PC32_BND       40
-+#define	R_X86_64_GOTPCRELX      41
-+#define	R_X86_64_REX_GOTPCRELX  42
- 
- 
- #define	R_ALPHA_NONE		0	/* No reloc */
-@@ -581,39 +596,42 @@
- #define	R_ARM_COUNT		38	/* Count of defined relocation types. */
- 
- 
--#define	R_386_NONE	0	/* No relocation. */
--#define	R_386_32	1	/* Add symbol value. */
--#define	R_386_PC32	2	/* Add PC-relative symbol value. */
--#define	R_386_GOT32	3	/* Add PC-relative GOT offset. */
--#define	R_386_PLT32	4	/* Add PC-relative PLT offset. */
--#define	R_386_COPY	5	/* Copy data from shared object. */
--#define	R_386_GLOB_DAT	6	/* Set GOT entry to data address. */
--#define	R_386_JMP_SLOT	7	/* Set GOT entry to code address. */
--#define	R_386_RELATIVE	8	/* Add load address of shared object. */
--#define	R_386_GOTOFF	9	/* Add GOT-relative symbol address. */
--#define	R_386_GOTPC	10	/* Add PC-relative GOT table address. */
--#define	R_386_TLS_TPOFF	14	/* Negative offset in static TLS block */
--#define	R_386_TLS_IE	15	/* Absolute address of GOT for -ve static TLS */
--#define	R_386_TLS_GOTIE	16	/* GOT entry for negative static TLS block */
--#define	R_386_TLS_LE	17	/* Negative offset relative to static TLS */
--#define	R_386_TLS_GD	18	/* 32 bit offset to GOT (index,off) pair */
--#define	R_386_TLS_LDM	19	/* 32 bit offset to GOT (index,zero) pair */
--#define	R_386_TLS_GD_32	24	/* 32 bit offset to GOT (index,off) pair */
--#define	R_386_TLS_GD_PUSH 25	/* pushl instruction for Sun ABI GD sequence */
--#define	R_386_TLS_GD_CALL 26	/* call instruction for Sun ABI GD sequence */
--#define	R_386_TLS_GD_POP 27	/* popl instruction for Sun ABI GD sequence */
--#define	R_386_TLS_LDM_32 28	/* 32 bit offset to GOT (index,zero) pair */
--#define	R_386_TLS_LDM_PUSH 29	/* pushl instruction for Sun ABI LD sequence */
--#define	R_386_TLS_LDM_CALL 30	/* call instruction for Sun ABI LD sequence */
--#define	R_386_TLS_LDM_POP 31	/* popl instruction for Sun ABI LD sequence */
--#define	R_386_TLS_LDO_32 32	/* 32 bit offset from start of TLS block */
--#define	R_386_TLS_IE_32	33	/* 32 bit offset to GOT static TLS offset entry */
--#define	R_386_TLS_LE_32	34	/* 32 bit offset within static TLS block */
--#define	R_386_TLS_DTPMOD32 35	/* GOT entry containing TLS index */
--#define	R_386_TLS_DTPOFF32 36	/* GOT entry containing TLS offset */
--#define	R_386_TLS_TPOFF32 37	/* GOT entry of -ve static TLS offset */
--
--#define	R_386_COUNT	38	/* Count of defined relocation types. */
-+#define	R_386_NONE          0
-+#define	R_386_32            1
-+#define	R_386_PC32          2
-+#define	R_386_GOT32         3
-+#define	R_386_PLT32         4
-+#define	R_386_COPY          5
-+#define	R_386_GLOB_DAT      6
-+#define	R_386_JMP_SLOT      7
-+#define	R_386_RELATIVE      8
-+#define	R_386_GOTOFF        9
-+#define	R_386_GOTPC         10
-+#define	R_386_TLS_TPOFF     14
-+#define	R_386_TLS_IE        15
-+#define	R_386_TLS_GOTIE     16
-+#define	R_386_TLS_LE        17
-+#define	R_386_TLS_GD        18
-+#define	R_386_TLS_LDM       19
-+#define	R_386_TLS_GD_32     24
-+#define	R_386_TLS_GD_PUSH   25
-+#define	R_386_TLS_GD_CALL   26
-+#define	R_386_TLS_GD_POP    27
-+#define	R_386_TLS_LDM_32    28
-+#define	R_386_TLS_LDM_PUSH  29
-+#define	R_386_TLS_LDM_CALL  30
-+#define	R_386_TLS_LDM_POP   31
-+#define	R_386_TLS_LDO_32    32
-+#define	R_386_TLS_IE_32     33
-+#define	R_386_TLS_LE_32     34
-+#define	R_386_TLS_DTPMOD32  35
-+#define	R_386_TLS_DTPOFF32  36
-+#define	R_386_TLS_TPOFF32   37
-+#define	R_386_TLS_GOTDESC   39
-+#define	R_386_TLS_DESC_CALL 40
-+#define	R_386_TLS_DESC      41
-+#define	R_386_IRELATIVE     42
-+#define	R_386_GOT32X        43
- 
- #define	R_PPC_NONE		0	/* No relocation. */
- #define	R_PPC_ADDR32		1
---- a/src/cmd/ld/ldelf.c	2015-09-23 06:20:05.000000000 +0200
-+++ b/src/cmd/ld/ldelf.c	2016-03-10 21:00:29.033083211 +0100
-@@ -888,12 +888,15 @@
- 	case R('6', R_X86_64_PC32):
- 	case R('6', R_X86_64_PLT32):
- 	case R('6', R_X86_64_GOTPCREL):
-+	case R('6', R_X86_64_GOTPCRELX):
-+	case R('6', R_X86_64_REX_GOTPCRELX):
- 	case R('8', R_386_32):
- 	case R('8', R_386_PC32):
- 	case R('8', R_386_GOT32):
- 	case R('8', R_386_PLT32):
- 	case R('8', R_386_GOTOFF):
- 	case R('8', R_386_GOTPC):
-+	case R('8', R_386_GOT32X):
- 		*siz = 4;
- 		break;
- 	case R('6', R_X86_64_64):
diff --git a/pkgs/development/compilers/go/remove-tools-1.5.patch b/pkgs/development/compilers/go/remove-tools-1.5.patch
deleted file mode 100644
index 5aad4b4abc3f..000000000000
--- a/pkgs/development/compilers/go/remove-tools-1.5.patch
+++ /dev/null
@@ -1,48 +0,0 @@
-diff --git a/src/cmd/go/pkg.go b/src/cmd/go/pkg.go
-index 61e3d8d..b8422ad 100644
---- a/src/cmd/go/pkg.go
-+++ b/src/cmd/go/pkg.go
-@@ -678,7 +678,7 @@ var goTools = map[string]targetDir{
- 	"cmd/trace":                            toTool,
- 	"cmd/vet":                              toTool,
- 	"cmd/yacc":                             toTool,
--	"golang.org/x/tools/cmd/godoc":         toBin,
-+	"nixos.org/x/tools/cmd/godoc":          toBin,
- 	"code.google.com/p/go.tools/cmd/cover": stalePath,
- 	"code.google.com/p/go.tools/cmd/godoc": stalePath,
- 	"code.google.com/p/go.tools/cmd/vet":   stalePath,
-diff --git a/src/go/build/build.go b/src/go/build/build.go
-index 496fe11..8c81dbd 100644
---- a/src/go/build/build.go
-+++ b/src/go/build/build.go
-@@ -1388,7 +1388,7 @@ func init() {
- }
- 
- // ToolDir is the directory containing build tools.
--var ToolDir = filepath.Join(runtime.GOROOT(), "pkg/tool/"+runtime.GOOS+"_"+runtime.GOARCH)
-+var ToolDir = runtime.GOTOOLDIR()
- 
- // IsLocalImport reports whether the import path is
- // a local import path, like ".", "..", "./foo", or "../foo".
-diff --git a/src/runtime/extern.go b/src/runtime/extern.go
-index d346362..fb22b6e 100644
---- a/src/runtime/extern.go
-+++ b/src/runtime/extern.go
-@@ -194,6 +194,17 @@ func GOROOT() string {
- 	return defaultGoroot
- }
- 
-+// GOTOOLDIR returns the root of the Go tree.
-+// It uses the GOTOOLDIR environment variable, if set,
-+// or else the root used during the Go build.
-+func GOTOOLDIR() string {
-+	s := gogetenv("GOTOOLDIR")
-+	if s != "" {
-+		return s
-+	}
-+	return GOROOT() + "/pkg/tool/" + GOOS + "_" + GOARCH
-+}
-+
- // Version returns the Go tree's version string.
- // It is either the commit hash and date at the time of the build or,
- // when possible, a release tag like "go1.3".
diff --git a/pkgs/development/compilers/go/remove-tools-1.7.patch b/pkgs/development/compilers/go/remove-tools-1.7.patch
deleted file mode 100644
index b53e48e1a515..000000000000
--- a/pkgs/development/compilers/go/remove-tools-1.7.patch
+++ /dev/null
@@ -1,35 +0,0 @@
-diff --git a/src/go/build/build.go b/src/go/build/build.go
-index 9706b8b..f250751 100644
---- a/src/go/build/build.go
-+++ b/src/go/build/build.go
-@@ -1513,7 +1513,7 @@ func init() {
- }
- 
- // ToolDir is the directory containing build tools.
--var ToolDir = filepath.Join(runtime.GOROOT(), "pkg/tool/"+runtime.GOOS+"_"+runtime.GOARCH)
-+var ToolDir = runtime.GOTOOLDIR()
- 
- // IsLocalImport reports whether the import path is
- // a local import path, like ".", "..", "./foo", or "../foo".
-diff --git a/src/runtime/extern.go b/src/runtime/extern.go
-index 441dcd9..a50277e 100644
---- a/src/runtime/extern.go
-+++ b/src/runtime/extern.go
-@@ -230,6 +230,17 @@ func GOROOT() string {
- 	return sys.DefaultGoroot
- }
- 
-+// GOTOOLDIR returns the root of the Go tree.
-+// It uses the GOTOOLDIR environment variable, if set,
-+// or else the root used during the Go build.
-+func GOTOOLDIR() string {
-+	s := gogetenv("GOTOOLDIR")
-+	if s != "" {
-+		return s
-+	}
-+	return GOROOT() + "/pkg/tool/" + GOOS + "_" + GOARCH
-+}
-+
- // Version returns the Go tree's version string.
- // It is either the commit hash and date at the time of the build or,
- // when possible, a release tag like "go1.3".
diff --git a/pkgs/development/compilers/go/strip.patch b/pkgs/development/compilers/go/strip.patch
deleted file mode 100644
index 7b036802d51c..000000000000
--- a/pkgs/development/compilers/go/strip.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-diff --git a/src/cmd/go/build.go b/src/cmd/go/build.go
-index 0b14725..a7608ce 100644
---- a/src/cmd/go/build.go
-+++ b/src/cmd/go/build.go
-@@ -2310,6 +2310,7 @@ func (gcToolchain) ld(b *builder, root *action, out string, allactions []*action
- 		}
- 	}
- 	var ldflags []string
-+	ldflags = append(ldflags, "-s")
- 	if buildContext.InstallSuffix != "" {
- 		ldflags = append(ldflags, "-installsuffix", buildContext.InstallSuffix)
- 	}
diff --git a/pkgs/development/compilers/haxe/default.nix b/pkgs/development/compilers/haxe/default.nix
index c6b4913c6236..a420949711e0 100644
--- a/pkgs/development/compilers/haxe/default.nix
+++ b/pkgs/development/compilers/haxe/default.nix
@@ -72,8 +72,8 @@ in {
     '';
   };
   haxe_3_4 = generic {
-    version = "3.4.4";
-    sha256 = "057psarsmz8q2y9pqv5221vpdya241gcy8xnl2wg9wyscn6z1lx6";
+    version = "3.4.6";
+    sha256 = "1myc4b8fwp0f9vky17wv45n34a583f5sjvajsc93f5gm1wanp4if";
     prePatch = ''
       sed -i -e 's|"/usr/lib/haxe/std/";|"'"$out/lib/haxe/std/"'";\n&|g' src/main.ml
       sed -i -e 's|"neko"|"${neko}/bin/neko"|g' extra/haxelib_src/src/haxelib/client/Main.hx
diff --git a/pkgs/development/compilers/hhvm/default.nix b/pkgs/development/compilers/hhvm/default.nix
index a66b2264f073..1cb28118ccbe 100644
--- a/pkgs/development/compilers/hhvm/default.nix
+++ b/pkgs/development/compilers/hhvm/default.nix
@@ -53,6 +53,7 @@ stdenv.mkDerivation rec {
       hphp/runtime/ext/std/*.cpp \
       hphp/runtime/ext_zend_compat/php-src/main/*.cpp \
       hphp/runtime/ext_zend_compat/php-src/main/*.h
+    sed '1i#include <functional>' -i third-party/mcrouter/src/mcrouter/lib/cycles/Cycles.h
     patchShebangs .
   '';
 
diff --git a/pkgs/development/compilers/jwasm/default.nix b/pkgs/development/compilers/jwasm/default.nix
new file mode 100644
index 000000000000..9800b33e7a9e
--- /dev/null
+++ b/pkgs/development/compilers/jwasm/default.nix
@@ -0,0 +1,27 @@
+{ stdenv, fetchFromGitHub
+, cmake }:
+
+with stdenv.lib;
+stdenv.mkDerivation rec {
+  name = "jwasm-${version}";
+  version = "git-2017-11-22";
+
+  src = fetchFromGitHub {
+    owner = "JWasm";
+    repo  = "JWasm";
+    rev    = "26f97c8b5c9d9341ec45538701116fa3649b7766";
+    sha256 = "0m972pc8vk8s9yv1pi85fsjgm6hj24gab7nalw2q04l0359nqi7w";
+  };
+
+  nativeBuildInputs = [ cmake ];
+
+  installPhase = "mkdir -p $out/bin ; cp jwasm $out/bin/";
+
+  meta = {
+    description = "A MASM-compatible x86 assembler";
+    homepage = http://jwasm.github.io/;
+    license = licenses.gpl2Plus;
+    maintainers = with maintainers; [ AndersonTorres ];
+    platforms = platforms.darwin ++ platforms.linux;
+  };
+}
diff --git a/pkgs/development/compilers/llvm/4/clang/default.nix b/pkgs/development/compilers/llvm/4/clang/default.nix
index 77863ab4f1ea..5531fd2ab77e 100644
--- a/pkgs/development/compilers/llvm/4/clang/default.nix
+++ b/pkgs/development/compilers/llvm/4/clang/default.nix
@@ -43,6 +43,8 @@ let
 
       # Patch for standalone doc building
       sed -i '1s,^,find_package(Sphinx REQUIRED)\n,' docs/CMakeLists.txt
+    '' + stdenv.lib.optionalString stdenv.hostPlatform.isMusl ''
+      sed -i -e 's/lgcc_s/lgcc_eh/' lib/Driver/Tools.cpp
     '';
 
     outputs = [ "out" "lib" "python" ];
diff --git a/pkgs/development/compilers/llvm/4/dynamiclibrary-musl.patch b/pkgs/development/compilers/llvm/4/dynamiclibrary-musl.patch
new file mode 100644
index 000000000000..d5d7f07b5e11
--- /dev/null
+++ b/pkgs/development/compilers/llvm/4/dynamiclibrary-musl.patch
@@ -0,0 +1,33 @@
+From d12ecb83d01dcb580dd94f4d57828f33d3eb4c35 Mon Sep 17 00:00:00 2001
+From: Natanael Copa <ncopa@alpinelinux.org>
+Date: Thu, 18 Feb 2016 15:33:21 +0100
+Subject: [PATCH 3/3] Fix DynamicLibrary to build with musl libc
+
+stdin/out/err is part of the libc and not the kernel so we check for the
+specific libc that does the unexpected instead of linux.
+
+This is needed for making it build with musl libc.
+---
+ lib/Support/DynamicLibrary.cpp | 4 ++--
+ 1 file changed, 2 insertions(+), 2 deletions(-)
+
+diff --git a/lib/Support/DynamicLibrary.cpp b/lib/Support/DynamicLibrary.cpp
+index 9a7aeb5..0c1c8f8 100644
+--- a/lib/Support/DynamicLibrary.cpp
++++ b/lib/Support/DynamicLibrary.cpp
+@@ -140,10 +140,10 @@ void* DynamicLibrary::SearchForAddressOfSymbol(const char *symbolName) {
+ #define EXPLICIT_SYMBOL(SYM) \
+    if (!strcmp(symbolName, #SYM)) return &SYM
+ 
+-// On linux we have a weird situation. The stderr/out/in symbols are both
++// On GNU libc we have a weird situation. The stderr/out/in symbols are both
+ // macros and global variables because of standards requirements. So, we
+ // boldly use the EXPLICIT_SYMBOL macro without checking for a #define first.
+-#if defined(__linux__) and !defined(__ANDROID__)
++#if defined(__GLIBC__)
+   {
+     EXPLICIT_SYMBOL(stderr);
+     EXPLICIT_SYMBOL(stdout);
+-- 
+2.7.3
+
diff --git a/pkgs/development/compilers/llvm/4/libc++/default.nix b/pkgs/development/compilers/llvm/4/libc++/default.nix
index db751bcffd42..f28957c35185 100644
--- a/pkgs/development/compilers/llvm/4/libc++/default.nix
+++ b/pkgs/development/compilers/llvm/4/libc++/default.nix
@@ -1,4 +1,4 @@
-{ lib, stdenv, fetch, cmake, llvm, libcxxabi, fixDarwinDylibNames, version }:
+{ lib, stdenv, fetch, cmake, python, llvm, libcxxabi, fixDarwinDylibNames, version }:
 
 stdenv.mkDerivation rec {
   name = "libc++-${version}";
@@ -15,6 +15,9 @@ stdenv.mkDerivation rec {
     ./pthread_mach_thread_np.patch
     # glibc 2.26 fix
     ./xlocale-glibc-2.26.patch
+  ] ++ stdenv.lib.optionals stdenv.hostPlatform.isMusl [
+    ../../libcxx-0001-musl-hacks.patch
+    ./max_align_t.patch
   ];
 
   prePatch = ''
@@ -24,9 +27,10 @@ stdenv.mkDerivation rec {
   preConfigure = ''
     # Get headers from the cxxabi source so we can see private headers not installed by the cxxabi package
     cmakeFlagsArray=($cmakeFlagsArray -DLIBCXX_CXX_ABI_INCLUDE_PATHS="$LIBCXXABI_INCLUDE_DIR")
+  '' + lib.optionalString stdenv.hostPlatform.isMusl ''
+    patchShebangs utils/cat_files.py
   '';
-
-  nativeBuildInputs = [ cmake ];
+  nativeBuildInputs = [ cmake ] ++ stdenv.lib.optional stdenv.hostPlatform.isMusl python;
 
   buildInputs = [ libcxxabi ] ++ lib.optional stdenv.isDarwin fixDarwinDylibNames;
 
@@ -34,7 +38,7 @@ stdenv.mkDerivation rec {
     "-DLIBCXX_LIBCXXABI_LIB_PATH=${libcxxabi}/lib"
     "-DLIBCXX_LIBCPPABI_VERSION=2"
     "-DLIBCXX_CXX_ABI=libcxxabi"
-  ];
+  ] ++ stdenv.lib.optional stdenv.hostPlatform.isMusl "-DLIBCXX_HAS_MUSL_LIBC=1";
 
   enableParallelBuilding = true;
 
diff --git a/pkgs/development/compilers/llvm/4/libc++/max_align_t.patch b/pkgs/development/compilers/llvm/4/libc++/max_align_t.patch
new file mode 100644
index 000000000000..060be5b23de8
--- /dev/null
+++ b/pkgs/development/compilers/llvm/4/libc++/max_align_t.patch
@@ -0,0 +1,54 @@
+From 917331c88bd2afce0cf0fdbcab55a64541b5bcf0 Mon Sep 17 00:00:00 2001
+From: "David L. Jones" <dlj@google.com>
+Date: Fri, 10 Feb 2017 01:27:42 +0000
+Subject: [PATCH] Check for musl-libc's max_align_t in addition to other
+ variants.
+
+Summary:
+Libcxx will define its own max_align_t when it is not available. However, the
+availability checks today only check for Clang's definition and GCC's
+definition. In particular, it does not check for musl's definition, which is the
+same as GCC's but guarded with a different macro.
+
+Reviewers: mclow.lists, EricWF
+
+Reviewed By: EricWF
+
+Subscribers: chandlerc, cfe-commits
+
+Differential Revision: https://reviews.llvm.org/D28478
+
+git-svn-id: https://llvm.org/svn/llvm-project/libcxx/trunk@294683 91177308-0d34-0410-b5e6-96231b3b80d8
+---
+ include/cstddef  | 3 ++-
+ include/stddef.h | 3 ++-
+ 2 files changed, 4 insertions(+), 2 deletions(-)
+
+diff --git a/include/cstddef b/include/cstddef
+index edd106c00..103898b7d 100644
+--- a/include/cstddef
++++ b/include/cstddef
+@@ -48,7 +48,8 @@ _LIBCPP_BEGIN_NAMESPACE_STD
+ using ::ptrdiff_t;
+ using ::size_t;
+ 
+-#if defined(__CLANG_MAX_ALIGN_T_DEFINED) || defined(_GCC_MAX_ALIGN_T)
++#if defined(__CLANG_MAX_ALIGN_T_DEFINED) || defined(_GCC_MAX_ALIGN_T) || \
++    defined(__DEFINED_max_align_t)
+ // Re-use the compiler's <stddef.h> max_align_t where possible.
+ using ::max_align_t;
+ #else
+diff --git a/include/stddef.h b/include/stddef.h
+index 8841bbea2..faf8552d8 100644
+--- a/include/stddef.h
++++ b/include/stddef.h
+@@ -53,7 +53,8 @@ using std::nullptr_t;
+ }
+ 
+ // Re-use the compiler's <stddef.h> max_align_t where possible.
+-#if !defined(__CLANG_MAX_ALIGN_T_DEFINED) && !defined(_GCC_MAX_ALIGN_T)
++#if !defined(__CLANG_MAX_ALIGN_T_DEFINED) && !defined(_GCC_MAX_ALIGN_T) && \
++    !defined(__DEFINED_max_align_t)
+ typedef long double max_align_t;
+ #endif
+ 
diff --git a/pkgs/development/compilers/llvm/4/libc++abi.nix b/pkgs/development/compilers/llvm/4/libc++abi.nix
index 6a3d91101360..41eb40e124eb 100644
--- a/pkgs/development/compilers/llvm/4/libc++abi.nix
+++ b/pkgs/development/compilers/llvm/4/libc++abi.nix
@@ -14,6 +14,9 @@ stdenv.mkDerivation {
     export cmakeFlags="-DLLVM_PATH=$PWD/$(ls -d llvm-*) -DLIBCXXABI_LIBCXX_PATH=$PWD/$(ls -d libcxx-*)"
   '' + stdenv.lib.optionalString stdenv.isDarwin ''
     export TRIPLE=x86_64-apple-darwin
+  '' + stdenv.lib.optionalString stdenv.hostPlatform.isMusl ''
+    patch -p1 -d $(ls -d libcxx-*) -i ${../libcxx-0001-musl-hacks.patch}
+    patch -p1 -d $(ls -d libcxx-*) -i ${./libc++/max_align_t.patch}
   '';
 
   installPhase = if stdenv.isDarwin
diff --git a/pkgs/development/compilers/llvm/4/llvm.nix b/pkgs/development/compilers/llvm/4/llvm.nix
index 17a25889e64f..7fd94316d738 100644
--- a/pkgs/development/compilers/llvm/4/llvm.nix
+++ b/pkgs/development/compilers/llvm/4/llvm.nix
@@ -65,7 +65,7 @@ in stdenv.mkDerivation (rec {
     substitute '${./llvm-outputs.patch}' ./llvm-outputs.patch --subst-var lib
     patch -p1 < ./llvm-outputs.patch
   ''
-  + stdenv.lib.optionalString (stdenv ? glibc) ''
+  + ''
     (
       cd projects/compiler-rt
       patch -p1 < ${
@@ -80,6 +80,9 @@ in stdenv.mkDerivation (rec {
     )
   '' + stdenv.lib.optionalString stdenv.isAarch64 ''
     patch -p0 < ${../aarch64.patch}
+  '' + stdenv.lib.optionalString stdenv.hostPlatform.isMusl ''
+    patch -p1 -i ${../TLI-musl.patch}
+    patch -p1 -i ${./dynamiclibrary-musl.patch}
   '';
 
   # hacky fix: created binaries need to be run before installation
@@ -110,6 +113,14 @@ in stdenv.mkDerivation (rec {
   ++ stdenv.lib.optionals (isDarwin) [
     "-DLLVM_ENABLE_LIBCXX=ON"
     "-DCAN_TARGET_i386=false"
+  ]
+  ++ stdenv.lib.optionals stdenv.hostPlatform.isMusl [
+    "-DLLVM_HOST_TRIPLE=${stdenv.hostPlatform.config}"
+    "-DLLVM_DEFAULT_TARGET_TRIPLE=${stdenv.targetPlatform.config}"
+    "-DTARGET_TRIPLE=${stdenv.targetPlatform.config}"
+
+    "-DCOMPILER_RT_BUILD_SANITIZERS=OFF"
+    "-DCOMPILER_RT_BUILD_XRAY=OFF"
   ];
 
   postBuild = ''
diff --git a/pkgs/development/compilers/llvm/5/clang/default.nix b/pkgs/development/compilers/llvm/5/clang/default.nix
index c8eafce4e396..b5aea54b5771 100644
--- a/pkgs/development/compilers/llvm/5/clang/default.nix
+++ b/pkgs/development/compilers/llvm/5/clang/default.nix
@@ -44,6 +44,8 @@ let
 
       # Patch for standalone doc building
       sed -i '1s,^,find_package(Sphinx REQUIRED)\n,' docs/CMakeLists.txt
+    '' + stdenv.lib.optionalString stdenv.hostPlatform.isMusl ''
+      sed -i -e 's/lgcc_s/lgcc_eh/' lib/Driver/ToolChains/*.cpp
     '';
 
     outputs = [ "out" "lib" "python" ];
diff --git a/pkgs/development/compilers/llvm/5/libc++/default.nix b/pkgs/development/compilers/llvm/5/libc++/default.nix
index 6f03e225ad65..9ddeea7ef79a 100644
--- a/pkgs/development/compilers/llvm/5/libc++/default.nix
+++ b/pkgs/development/compilers/llvm/5/libc++/default.nix
@@ -1,4 +1,4 @@
-{ lib, stdenv, fetch, cmake, llvm, libcxxabi, fixDarwinDylibNames, version }:
+{ lib, stdenv, fetch, cmake, python, llvm, libcxxabi, fixDarwinDylibNames, version }:
 
 stdenv.mkDerivation rec {
   name = "libc++-${version}";
@@ -10,6 +10,12 @@ stdenv.mkDerivation rec {
     export LIBCXXABI_INCLUDE_DIR="$PWD/$(ls -d libcxxabi-${version}*)/include"
   '';
 
+  # on next rebuild, this can be replaced with optionals; for now set to null to avoid
+  # patches = stdenv.lib.optionals stdenv.hostPlatform.isMusl [
+  patches = if stdenv.hostPlatform.isMusl then [
+    ../../libcxx-0001-musl-hacks.patch
+  ] else null;
+
   prePatch = ''
     substituteInPlace lib/CMakeLists.txt --replace "/usr/lib/libc++" "\''${LIBCXX_LIBCXXABI_LIB_PATH}/libc++"
   '';
@@ -17,9 +23,10 @@ stdenv.mkDerivation rec {
   preConfigure = ''
     # Get headers from the cxxabi source so we can see private headers not installed by the cxxabi package
     cmakeFlagsArray=($cmakeFlagsArray -DLIBCXX_CXX_ABI_INCLUDE_PATHS="$LIBCXXABI_INCLUDE_DIR")
+  '' + lib.optionalString stdenv.hostPlatform.isMusl ''
+    patchShebangs utils/cat_files.py
   '';
-
-  nativeBuildInputs = [ cmake ];
+  nativeBuildInputs = [ cmake ] ++ stdenv.lib.optional stdenv.hostPlatform.isMusl python;
 
   buildInputs = [ libcxxabi ] ++ lib.optional stdenv.isDarwin fixDarwinDylibNames;
 
@@ -27,7 +34,7 @@ stdenv.mkDerivation rec {
     "-DLIBCXX_LIBCXXABI_LIB_PATH=${libcxxabi}/lib"
     "-DLIBCXX_LIBCPPABI_VERSION=2"
     "-DLIBCXX_CXX_ABI=libcxxabi"
-  ];
+  ] ++ stdenv.lib.optional stdenv.hostPlatform.isMusl "-DLIBCXX_HAS_MUSL_LIBC=1";
 
   enableParallelBuilding = true;
 
diff --git a/pkgs/development/compilers/llvm/5/libc++abi.nix b/pkgs/development/compilers/llvm/5/libc++abi.nix
index 166f4260291f..6d27dcd47b0b 100644
--- a/pkgs/development/compilers/llvm/5/libc++abi.nix
+++ b/pkgs/development/compilers/llvm/5/libc++abi.nix
@@ -14,6 +14,8 @@ stdenv.mkDerivation {
     export cmakeFlags="-DLLVM_PATH=$PWD/$(ls -d llvm-*) -DLIBCXXABI_LIBCXX_PATH=$PWD/$(ls -d libcxx-*)"
   '' + stdenv.lib.optionalString stdenv.isDarwin ''
     export TRIPLE=x86_64-apple-darwin
+  '' + stdenv.lib.optionalString stdenv.hostPlatform.isMusl ''
+    patch -p1 -d $(ls -d libcxx-*) -i ${../libcxx-0001-musl-hacks.patch}
   '';
 
   installPhase = if stdenv.isDarwin
diff --git a/pkgs/development/compilers/llvm/5/llvm.nix b/pkgs/development/compilers/llvm/5/llvm.nix
index 1f55e6c54e7d..f574eb05f92b 100644
--- a/pkgs/development/compilers/llvm/5/llvm.nix
+++ b/pkgs/development/compilers/llvm/5/llvm.nix
@@ -36,7 +36,7 @@ in stdenv.mkDerivation (rec {
     mv compiler-rt-* $sourceRoot/projects/compiler-rt
   '';
 
-  outputs = [ "out" ]
+  outputs = [ "out" "python" ]
     ++ stdenv.lib.optional enableSharedLibraries "lib";
 
   nativeBuildInputs = [ cmake python ]
@@ -74,6 +74,11 @@ in stdenv.mkDerivation (rec {
     patch -p1 -i ${./compiler-rt-codesign.patch} -d projects/compiler-rt
   '' + stdenv.lib.optionalString stdenv.isAarch64 ''
     patch -p0 < ${../aarch64.patch}
+  '' + stdenv.lib.optionalString stdenv.hostPlatform.isMusl ''
+    patch -p1 -i ${../TLI-musl.patch}
+    substituteInPlace unittests/Support/CMakeLists.txt \
+      --replace "add_subdirectory(DynamicLibrary)" ""
+    rm unittests/Support/DynamicLibrary/DynamicLibraryTest.cpp
   '';
 
   # hacky fix: created binaries need to be run before installation
@@ -104,6 +109,14 @@ in stdenv.mkDerivation (rec {
   ++ stdenv.lib.optionals (isDarwin) [
     "-DLLVM_ENABLE_LIBCXX=ON"
     "-DCAN_TARGET_i386=false"
+  ]
+  ++ stdenv.lib.optionals stdenv.hostPlatform.isMusl [
+    "-DLLVM_HOST_TRIPLE=${stdenv.hostPlatform.config}"
+    "-DLLVM_DEFAULT_TARGET_TRIPLE=${stdenv.targetPlatform.config}"
+    "-DTARGET_TRIPLE=${stdenv.targetPlatform.config}"
+
+    "-DCOMPILER_RT_BUILD_SANITIZERS=OFF"
+    "-DCOMPILER_RT_BUILD_XRAY=OFF"
   ];
 
   postBuild = ''
@@ -120,7 +133,11 @@ in stdenv.mkDerivation (rec {
     export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$PWD/lib
   '';
 
-  postInstall = stdenv.lib.optionalString enableSharedLibraries ''
+  postInstall = ''
+    mkdir -p $python/share
+    mv $out/share/opt-viewer $python/share/opt-viewer
+  ''
+  + stdenv.lib.optionalString enableSharedLibraries ''
     moveToOutput "lib/libLLVM-*" "$lib"
     moveToOutput "lib/libLLVM${stdenv.hostPlatform.extensions.sharedLibrary}" "$lib"
     substituteInPlace "$out/lib/cmake/llvm/LLVMExports-${if debugVersion then "debug" else "release"}.cmake" \
diff --git a/pkgs/development/compilers/llvm/TLI-musl.patch b/pkgs/development/compilers/llvm/TLI-musl.patch
new file mode 100644
index 000000000000..1a6908086637
--- /dev/null
+++ b/pkgs/development/compilers/llvm/TLI-musl.patch
@@ -0,0 +1,35 @@
+From 5c571082fdaf61f6df19d9b7137dc26d71334058 Mon Sep 17 00:00:00 2001
+From: Natanael Copa <ncopa@alpinelinux.org>
+Date: Thu, 18 Feb 2016 10:33:04 +0100
+Subject: [PATCH 2/3] Fix build with musl libc
+
+On musl libc the fopen64 and fopen are the same thing, but for
+compatibility they have a `#define fopen64 fopen`. Same applies for
+fseek64, fstat64, fstatvfs64, ftello64, lstat64, stat64 and tmpfile64.
+---
+ include/llvm/Analysis/TargetLibraryInfo.h | 9 +++++++++
+ 1 file changed, 9 insertions(+)
+
+diff --git a/include/llvm/Analysis/TargetLibraryInfo.h b/include/llvm/Analysis/TargetLibraryInfo.h
+index 7becdf0..7f14427 100644
+--- a/include/llvm/Analysis/TargetLibraryInfo.h
++++ b/include/llvm/Analysis/TargetLibraryInfo.h
+@@ -18,6 +18,15 @@
+ #include "llvm/IR/Module.h"
+ #include "llvm/Pass.h"
+ 
++#undef fopen64
++#undef fseeko64
++#undef fstat64
++#undef fstatvfs64
++#undef ftello64
++#undef lstat64
++#undef stat64
++#undef tmpfile64
++
+ namespace llvm {
+ /// VecDesc - Describes a possible vectorization of a function.
+ /// Function 'VectorFnName' is equivalent to 'ScalarFnName' vectorized
+-- 
+2.7.3
+
diff --git a/pkgs/development/compilers/llvm/libcxx-0001-musl-hacks.patch b/pkgs/development/compilers/llvm/libcxx-0001-musl-hacks.patch
new file mode 100644
index 000000000000..bcb5ad8cfb87
--- /dev/null
+++ b/pkgs/development/compilers/llvm/libcxx-0001-musl-hacks.patch
@@ -0,0 +1,39 @@
+From 1c936d7fda3275265e37f93697232a1ed652390f Mon Sep 17 00:00:00 2001
+From: Will Dietz <w@wdtz.org>
+Date: Sat, 9 Jul 2016 19:22:54 -0500
+Subject: [PATCH] musl fixes/hacks
+
+Conflicts:
+
+	include/__config
+	include/locale
+	src/locale.cpp
+---
+ include/locale |    4 ++--
+ 1 files changed, 2 insertions(+), 2 deletions(-)
+
+diff --git a/include/locale b/include/locale
+index 3d804e8..9b01f5b 100644
+--- a/include/locale
++++ b/include/locale
+@@ -695,7 +695,7 @@ __num_get_signed_integral(const char* __a, const char* __a_end,
+         typename remove_reference<decltype(errno)>::type __save_errno = errno;
+         errno = 0;
+         char *__p2;
+-        long long __ll = strtoll_l(__a, &__p2, __base, _LIBCPP_GET_C_LOCALE);
++        long long __ll = strtoll(__a, &__p2, __base);
+         typename remove_reference<decltype(errno)>::type __current_errno = errno;
+         if (__current_errno == 0)
+             errno = __save_errno;
+@@ -735,7 +735,7 @@ __num_get_unsigned_integral(const char* __a, const char* __a_end,
+         typename remove_reference<decltype(errno)>::type __save_errno = errno;
+         errno = 0;
+         char *__p2;
+-        unsigned long long __ll = strtoull_l(__a, &__p2, __base, _LIBCPP_GET_C_LOCALE);
++        unsigned long long __ll = strtoull(__a, &__p2, __base);
+         typename remove_reference<decltype(errno)>::type __current_errno = errno;
+         if (__current_errno == 0)
+             errno = __save_errno;
+-- 
+1.7.1
+
diff --git a/pkgs/development/compilers/mono/5.8.nix b/pkgs/development/compilers/mono/5.8.nix
new file mode 100644
index 000000000000..6db9e19807bb
--- /dev/null
+++ b/pkgs/development/compilers/mono/5.8.nix
@@ -0,0 +1,8 @@
+{ stdenv, callPackage, Foundation, libobjc }:
+
+callPackage ./generic-cmake.nix (rec {
+  inherit Foundation libobjc;
+  version = "5.8.0.108";
+  sha256 = "177khb06dfll0pcncr84vvibni7f8m5fgb30ndgsdjk25xfcbmzc";
+  enableParallelBuilding = false;
+})
diff --git a/pkgs/development/compilers/openjdk/7.nix b/pkgs/development/compilers/openjdk/7.nix
index 372bb1532698..13f8bcfdb1de 100644
--- a/pkgs/development/compilers/openjdk/7.nix
+++ b/pkgs/development/compilers/openjdk/7.nix
@@ -69,7 +69,10 @@ let
         fontconfig perl file bootjdk
       ];
 
-    NIX_CFLAGS_COMPILE = "-Wno-error=deprecated-declarations";
+    NIX_CFLAGS_COMPILE = [
+      "-Wno-error=deprecated-declarations"
+      "-Wno-error=format-overflow" # newly detected by gcc7
+    ];
 
     NIX_LDFLAGS = if minimal then null else "-lfontconfig -lXcursor -lXinerama";
 
diff --git a/pkgs/development/compilers/purescript/psc-package/default.nix b/pkgs/development/compilers/purescript/psc-package/default.nix
index 5e298dbf2cee..451722aea060 100644
--- a/pkgs/development/compilers/purescript/psc-package/default.nix
+++ b/pkgs/development/compilers/purescript/psc-package/default.nix
@@ -22,5 +22,5 @@ mkDerivation rec {
 
   description = "An experimental package manager for PureScript";
   license = licenses.bsd3;
-  maintainers = with lib.maintainers; [ profpatsch ];
+  maintainers = with lib.maintainers; [ Profpatsch ];
 }
diff --git a/pkgs/development/compilers/rust/binaryBuild.nix b/pkgs/development/compilers/rust/binaryBuild.nix
index 6c6f6b55e1e6..1904c12dfdc1 100644
--- a/pkgs/development/compilers/rust/binaryBuild.nix
+++ b/pkgs/development/compilers/rust/binaryBuild.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, makeWrapper, cacert, zlib, buildRustPackage, curl, darwin
+{ stdenv, fetchurl, makeWrapper, bash, cacert, zlib, buildRustPackage, curl, darwin
 , version
 , src
 , platform
@@ -34,9 +34,11 @@ rec {
       license = [ licenses.mit licenses.asl20 ];
     };
 
-    phases = ["unpackPhase" "installPhase" "fixupPhase"];
+    buildInputs = [ bash ] ++ stdenv.lib.optional stdenv.isDarwin Security;
 
-    buildInputs = stdenv.lib.optional stdenv.isDarwin Security;
+    postPatch = ''
+      patchShebangs .
+    '';
 
     installPhase = ''
       ./install.sh --prefix=$out \
@@ -86,9 +88,11 @@ rec {
       license = [ licenses.mit licenses.asl20 ];
     };
 
-    phases = ["unpackPhase" "installPhase" "fixupPhase"];
+    buildInputs = [ makeWrapper bash ] ++ stdenv.lib.optional stdenv.isDarwin Security;
 
-    buildInputs = [ makeWrapper ] ++ stdenv.lib.optional stdenv.isDarwin Security;
+    postPatch = ''
+      patchShebangs .
+    '';
 
     installPhase = ''
       patchShebangs ./install.sh
diff --git a/pkgs/development/compilers/rust/bootstrap.nix b/pkgs/development/compilers/rust/bootstrap.nix
index 034334f58500..9b488bab5b3b 100644
--- a/pkgs/development/compilers/rust/bootstrap.nix
+++ b/pkgs/development/compilers/rust/bootstrap.nix
@@ -3,16 +3,16 @@
 let
   # Note: the version MUST be one version prior to the version we're
   # building
-  version = "1.21.0";
+  version = "1.23.0";
 
-  # fetch hashes by running `print-hashes.sh 1.21.0`
+  # fetch hashes by running `print-hashes.sh 1.23.0`
   hashes = {
-    i686-unknown-linux-gnu = "b7caed0f602cdb8ef22e0bfa9125a65bec411e15c0b8901d937e43303ec7dbee";
-    x86_64-unknown-linux-gnu = "b41e70e018402bc04d02fde82f91bea24428e6be432f0df12ac400cfb03108e8";
-    armv7-unknown-linux-gnueabihf = "416fa6f107ad9e386002e6af1aec495472e2ee489c842183dd429a25b07488d6";
-    aarch64-unknown-linux-gnu = "491ee6c43cc672006968d665bd34c94cc2219ef3592d93d38097c97eaaa864c3";
-    i686-apple-darwin = "c8b0fabeebcde66b683f3a871187e614e07305adda414c2862cb332aecb2b3bf";
-    x86_64-apple-darwin = "75a7f4bd7c72948030bb9e421df27e8a650dea826fb5b836cf59d23d6f985a0d";
+    i686-unknown-linux-gnu = "dc5bd0ef47e1036c8ca64676d8967102cb86ce4bf50b90a9845951c3e940423f";
+    x86_64-unknown-linux-gnu = "9a34b23a82d7f3c91637e10ceefb424539dcfa327c2dcd292ff10c047b1fdc7e";
+    armv7-unknown-linux-gnueabihf = "587027899267f1961520438c2c7f6775fe224160d43ddf07332b9b943a26b08e";
+    aarch64-unknown-linux-gnu = "38379fbd976d2286cb73f21466db40a636a583b9f8a80af5eea73617c7912bc7";
+    i686-apple-darwin = "4709eb1ad2fb871fdaee4b3449569cef366b0d170453cf17484a12286564f2ad";
+    x86_64-apple-darwin = "9274e977322bb4b153f092255ac9bd85041142c73eaabf900cb2ef3d3abb2eba";
   };
 
   platform =
diff --git a/pkgs/development/compilers/rust/cargo.nix b/pkgs/development/compilers/rust/cargo.nix
index 4c397c8c1a48..46caabf33917 100644
--- a/pkgs/development/compilers/rust/cargo.nix
+++ b/pkgs/development/compilers/rust/cargo.nix
@@ -1,7 +1,8 @@
 { stdenv, fetchFromGitHub, file, curl, pkgconfig, python, openssl, cmake, zlib
 , makeWrapper, libiconv, cacert, rustPlatform, rustc, libgit2, darwin
-, version, srcSha, cargoSha256
-, patches ? [] }:
+, version
+, patches ? []
+, src }:
 
 let
   inherit (darwin.apple_sdk.frameworks) CoreFoundation;
@@ -9,20 +10,18 @@ in
 
 rustPlatform.buildRustPackage rec {
   name = "cargo-${version}";
-  inherit version;
+  inherit version src patches;
 
-  src = fetchFromGitHub {
-    owner  = "rust-lang";
-    repo   = "cargo";
-    rev    = version;
-    sha256 = srcSha;
-  };
-
-  inherit cargoSha256;
-  inherit patches;
+  # the rust source tarball already has all the dependencies vendored, no need to fetch them again
+  cargoVendorDir = "src/vendor";
+  preBuild = "cd src; pushd tools/cargo";
+  postBuild = "popd";
 
   passthru.rustc = rustc;
 
+  # changes hash of vendor directory otherwise on aarch64
+  dontUpdateAutotoolsGnuConfigScripts = if stdenv.isAarch64 then "1" else null;
+
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ cacert file curl python openssl cmake zlib makeWrapper libgit2 ]
     ++ stdenv.lib.optionals stdenv.isDarwin [ CoreFoundation libiconv ];
diff --git a/pkgs/development/compilers/rust/default.nix b/pkgs/development/compilers/rust/default.nix
index b5550a96a835..dd15580c11b8 100644
--- a/pkgs/development/compilers/rust/default.nix
+++ b/pkgs/development/compilers/rust/default.nix
@@ -6,21 +6,20 @@
 
 let
   rustPlatform = recurseIntoAttrs (makeRustPlatform (callPackage ./bootstrap.nix {}));
-  version = "1.22.1";
-in
-rec {
+  version = "1.24.0";
+  cargoVersion = "0.24.0";
+  src = fetchurl {
+    url = "https://static.rust-lang.org/dist/rustc-${version}-src.tar.gz";
+    sha256 = "17v3jpyky8vkkgai5yd2zr8zl87qpgj6dx99gx27x1sf0kv7d0mv";
+  };
+in rec {
   rustc = callPackage ./rustc.nix {
-    inherit llvm targets targetPatches targetToolchains rustPlatform version;
+    inherit stdenv llvm targets targetPatches targetToolchains rustPlatform version src;
 
     forceBundledLLVM = true;
 
     configureFlags = [ "--release-channel=stable" ];
 
-    src = fetchurl {
-      url = "https://static.rust-lang.org/dist/rustc-${version}-src.tar.gz";
-      sha256 = "1lrzzp0nh7s61wgfs2h6ilaqi6iq89f1pd1yaf65l87bssyl4ylb";
-    };
-
     patches = [
       ./patches/0001-Disable-fragile-tests-libstd-net-tcp-on-Darwin-Linux.patch
     ] ++ stdenv.lib.optional stdenv.needsPax ./patches/grsec.patch
@@ -30,10 +29,9 @@ rec {
   };
 
   cargo = callPackage ./cargo.nix rec {
-    version = "0.23.0";
-    srcSha = "14b2n1msxma19ydchj54hd7f2zdsr524fg133dkmdn7j65f1x6aj";
-    cargoSha256 = "1sj59z0w172qvjwg1ma5fr5am9dgw27086xwdnrvlrk4hffcr7y7";
-
+    version = cargoVersion;
+    inherit src;
+    inherit stdenv;
     inherit rustc; # the rustc that will be wrapped by cargo
     inherit rustPlatform; # used to build cargo
   };
diff --git a/pkgs/development/compilers/rust/patches/aarch64-disable-test_loading_cosine.patch b/pkgs/development/compilers/rust/patches/aarch64-disable-test_loading_cosine.patch
index d29eb16cfe55..bafab0e9ef71 100644
--- a/pkgs/development/compilers/rust/patches/aarch64-disable-test_loading_cosine.patch
+++ b/pkgs/development/compilers/rust/patches/aarch64-disable-test_loading_cosine.patch
@@ -1,7 +1,7 @@
-diff --git a/src/librustc_back/dynamic_lib.rs b/src/librustc_back/dynamic_lib.rs
+diff --git a/src/librustc_metadata/dynamic_lib.rs b/src/librustc_metadata/dynamic_lib.rs
 index 1b42fa0..92256dc 100644
---- a/src/librustc_back/dynamic_lib.rs
-+++ b/src/librustc_back/dynamic_lib.rs
+--- a/src/librustc_metadata/dynamic_lib.rs
++++ b/src/librustc_metadata/dynamic_lib.rs
 @@ -80,6 +80,7 @@ mod tests {
      use std::mem;
  
diff --git a/pkgs/development/compilers/rust/rustc.nix b/pkgs/development/compilers/rust/rustc.nix
index 9d6f641bc46c..92b149865fa2 100644
--- a/pkgs/development/compilers/rust/rustc.nix
+++ b/pkgs/development/compilers/rust/rustc.nix
@@ -57,9 +57,9 @@ stdenv.mkDerivation {
   # We need rust to build rust. If we don't provide it, configure will try to download it.
   configureFlags = configureFlags
                 ++ [ "--enable-local-rust" "--local-rust-root=${rustPlatform.rust.rustc}" "--enable-rpath" ]
-                ++ [ "--enable-vendor" "--disable-locked-deps" ]
+                ++ [ "--enable-vendor" ]
                 # ++ [ "--jemalloc-root=${jemalloc}/lib"
-                ++ [ "--default-linker=${targetPackages.stdenv.cc}/bin/cc" "--default-ar=${targetPackages.stdenv.cc.bintools}/bin/ar" ]
+                ++ [ "--default-linker=${targetPackages.stdenv.cc}/bin/cc" ]
                 ++ optional (!forceBundledLLVM) [ "--enable-llvm-link-shared" ]
                 ++ optional (targets != []) "--target=${target}"
                 ++ optional (!forceBundledLLVM) "--llvm-root=${llvmShared}";
@@ -72,6 +72,8 @@ stdenv.mkDerivation {
   passthru.target = target;
 
   postPatch = ''
+    patchShebangs src/etc
+
     # Fix dynamic linking against llvm
     #${optionalString (!forceBundledLLVM) ''sed -i 's/, kind = \\"static\\"//g' src/etc/mklldeps.py''}
 
@@ -86,7 +88,7 @@ stdenv.mkDerivation {
 
     # Disable fragile tests.
     rm -vr src/test/run-make/linker-output-non-utf8 || true
-    rm -vr src/test/run-make/issue-26092.rs || true
+    rm -vr src/test/run-make/issue-26092 || true
 
     # Remove test targeted at LLVM 3.9 - https://github.com/rust-lang/rust/issues/36835
     rm -vr src/test/run-pass/issue-36023.rs || true
@@ -98,19 +100,6 @@ stdenv.mkDerivation {
     # On Hydra: `TcpListener::bind(&addr)`: Address already in use (os error 98)'
     sed '/^ *fn fast_rebind()/i#[ignore]' -i src/libstd/net/tcp.rs
 
-    # Disable some failing gdb tests. Try re-enabling these when gdb
-    # is updated past version 7.12.
-    rm src/test/debuginfo/basic-types-globals.rs
-    rm src/test/debuginfo/basic-types-mut-globals.rs
-    rm src/test/debuginfo/c-style-enum.rs
-    rm src/test/debuginfo/lexical-scopes-in-block-expression.rs
-    rm src/test/debuginfo/limited-debuginfo.rs
-    rm src/test/debuginfo/simple-struct.rs
-    rm src/test/debuginfo/simple-tuple.rs
-    rm src/test/debuginfo/union-smoke.rs
-    rm src/test/debuginfo/vec-slices.rs
-    rm src/test/debuginfo/vec.rs
-
     # Useful debugging parameter
     # export VERBOSE=1
   ''
diff --git a/pkgs/development/compilers/sbcl/default.nix b/pkgs/development/compilers/sbcl/default.nix
index 54610467e7ae..39b84ae6a365 100644
--- a/pkgs/development/compilers/sbcl/default.nix
+++ b/pkgs/development/compilers/sbcl/default.nix
@@ -9,11 +9,11 @@
 
 stdenv.mkDerivation rec {
   name    = "sbcl-${version}";
-  version = "1.4.3";
+  version = "1.4.4";
 
   src = fetchurl {
     url    = "mirror://sourceforge/project/sbcl/sbcl/${version}/${name}-source.tar.bz2";
-    sha256 = "1z8d11k6vc6jhmpwzy0nawj84qdd2jvibrvqmb1nmq3h8w64hlam";
+    sha256 = "1k6v5b8qv7vyxvh8asx6phf2hbapx5pp5p5j47hgnq123fwnh4fa";
   };
 
   patchPhase = ''
diff --git a/pkgs/development/compilers/scala/dotty-bare.nix b/pkgs/development/compilers/scala/dotty-bare.nix
index 60cb3e9a2029..bff73337e9e8 100644
--- a/pkgs/development/compilers/scala/dotty-bare.nix
+++ b/pkgs/development/compilers/scala/dotty-bare.nix
@@ -1,12 +1,12 @@
 { stdenv, fetchurl, makeWrapper, jre }:
 
 stdenv.mkDerivation rec {
-  version = "0.4.0-RC1";
+  version = "0.6.0-RC1";
   name = "dotty-bare-${version}";
 
   src = fetchurl {
     url = "https://github.com/lampepfl/dotty/releases/download/${version}/dotty-${version}.tar.gz";
-    sha256 = "1d1ab08b85bd6898ce6273fa50818de0d314fc6e5377fb6ee05494827043321b";
+    sha256 = "de1f5e72fb0e0b4c377d6cec93f565eff49769698cd8be01b420705fe8475ca4";
   };
 
   propagatedBuildInputs = [ jre ] ;
diff --git a/pkgs/development/compilers/solc/default.nix b/pkgs/development/compilers/solc/default.nix
index cd8c839cf4fe..4c79fb15c5cb 100644
--- a/pkgs/development/compilers/solc/default.nix
+++ b/pkgs/development/compilers/solc/default.nix
@@ -1,9 +1,7 @@
-{ stdenv, fetchzip, fetchgit, boost, cmake, z3 }:
+{ stdenv, fetchzip, fetchurl, boost, cmake, z3 }:
 
 let
-  version = "0.4.19";
-  rev = "c4cbbb054b5ed3b8ceaa21ee5b47b0704762ff40";
-  sha256 = "1h2ziwdswghj4aa3vd3k3y2ckfiwjk6x38w2kp4m324k2ydxd15c";
+  version = "0.4.20";
   jsoncppURL = https://github.com/open-source-parsers/jsoncpp/archive/1.7.7.tar.gz;
   jsoncpp = fetchzip {
     url = jsoncppURL;
@@ -15,14 +13,12 @@ stdenv.mkDerivation {
   name = "solc-${version}";
 
   # Cannot use `fetchFromGitHub' because of submodules
-  src = fetchgit {
-    url = "https://github.com/ethereum/solidity";
-    inherit rev sha256;
+  src = fetchurl {
+    url = "https://github.com/ethereum/solidity/releases/download/v${version}/solidity_${version}.tar.gz";
+    sha256 = "0jyqnykj537ksfsf2m6ww9vganmpa6yd5fmlfpa5qm1076kq7zd6";
   };
 
   patchPhase = ''
-    echo >commit_hash.txt '${rev}'
-    echo >prerelease.txt
     substituteInPlace cmake/jsoncpp.cmake \
       --replace '${jsoncppURL}' ${jsoncpp}
     substituteInPlace cmake/EthCompilerSettings.cmake \
diff --git a/pkgs/development/compilers/swift/default.nix b/pkgs/development/compilers/swift/default.nix
index 937977b0a97d..360f96e12427 100644
--- a/pkgs/development/compilers/swift/default.nix
+++ b/pkgs/development/compilers/swift/default.nix
@@ -12,7 +12,6 @@
 , swig
 , bash
 , libxml2
-, llvm
 , clang
 , python
 , ncurses
@@ -28,13 +27,17 @@
 , git
 , libgit2
 , fetchFromGitHub
+, fetchpatch
 , paxctl
 , findutils
+, makeWrapper
+, gnumake
+, file
 #, systemtap
 }:
 
 let
-  v_major = "3.1.1";
+  v_major = "4.0.3";
   version = "${v_major}-RELEASE";
   version_friendly = "${v_major}";
 
@@ -47,53 +50,53 @@ let
       name = "${repo}-${version}-src";
     };
 
-sources = {
+  sources = {
     # FYI: SourceKit probably would work but currently requires building everything twice
     # For more inforation, see: https://github.com/apple/swift/pull/3594#issuecomment-234169759
     clang = fetch {
       repo = "swift-clang";
-      sha256 = "1gmdgr8jph87nya8cgdl7iwrggbji2sag996m27hkbszw4nxy8sd";
+      sha256 = "0zm624iwiprk3c3nzqf4p1fd9zqic4yi3jv51cw3249ax4x6vy10";
     };
     llvm = fetch {
       repo = "swift-llvm";
-      sha256 = "0nwd7cp6mbj7f6a2rx8123n7ygs8406hsx7hp7ybagww6v75bwzi";
+      sha256 = "11vw6461c0cdvwm1wna1a5709fjj14hzp6br6jg94p4f6jp3yv4d";
     };
     compilerrt = fetch {
       repo = "swift-compiler-rt";
-      sha256 = "1gjcr6g3ffs3nhf4a84iwg4flbd7rqcf9rvvclwyq96msa3mj950";
+      sha256 = "1hj4qaj4c9n2wzg2cvarbyl0n708zd1dlw4zkzq07fjxxqs36nfa";
     };
     cmark = fetch {
       repo = "swift-cmark";
-      sha256 = "0qf2f3zd8lndkfbxbz6vkznzz8rvq5gigijh7pgmfx9fi4zcssqx";
+      sha256 = "1nmxp0fj749sgar682c5nsj7zxxigqwg973baxj2r656a7ybh325";
     };
     lldb = fetch {
       repo = "swift-lldb";
-      sha256 = "17n4whpf3wxw9zaayiq21gk9q3547qxi4rvxld2hybh0k7a1bj5c";
+      sha256 = "0yk5qg85008vcn63vn2jpn5ls9pdhda222p2w1cfkrj27k5k8vqr";
     };
     llbuild = fetch {
       repo = "swift-llbuild";
-      sha256 = "1l3hnb2s01jby91k1ipbc3bhszq14vyx5pzdhf2chld1yhpg420d";
+      sha256 = "0jffw6z1s6ck1i05brw59x6vsg7zrxbz5n2wz72fj29rh3nppc7a";
     };
     pm = fetch {
       repo = "swift-package-manager";
-      sha256 = "1ayy5vk3mjk354pg9bf68wvnaj3jymx23w0qnlw1jxz256ff8fwi";
+      sha256 = "0xj070b8fii7ijfsnyq4fxgv6569vdrg0yippi85h2p1l7s9aagh";
     };
     xctest = fetch {
       repo = "swift-corelibs-xctest";
-      sha256 = "0cj5y7wanllfldag08ci567x12aw793c79afckpbsiaxmwy4xhnm";
+      sha256 = "0l355wq8zfwrpv044xf4smjwbm0bmib360748n8cwls3vkr9l2yv";
     };
     foundation = fetch {
       repo = "swift-corelibs-foundation";
-      sha256 = "1d1ldk7ckqn4mhmdhsx2zrmsd6jfxzgdywn2pki7limk979hcwjc";
+      sha256 = "0s7yc5gsbd96a4bs8c6q24dyfjm4xhcr2nzhl2ics8dmi60j15s4";
     };
     libdispatch = fetch {
       repo = "swift-corelibs-libdispatch";
-      sha256 = "0ckjg41fjak06i532azhryckjq64fkxzsal4svf5v4s8n9mkq2sg";
+      sha256 = "0x8zzq3shhvmhq4sbhaaa0ddiv3nw347pz6ayym6jyzq7j9n15ia";
       fetchSubmodules = true;
     };
     swift = fetch {
       repo = "swift";
-      sha256 = "0879jlv37lmxc1apzi53xn033y72548i86r7fzwr0g52124q5gry";
+      sha256 = "0a1gq0k5701i418f0qi7kywv16q7vh4a4wp0f6fpyv4sjkq27msx";
     };
   };
 
@@ -119,6 +122,9 @@ sources = {
   ];
 
   builder = ''
+    # gcc-6.4.0/include/c++/6.4.0/cstdlib:75:15: fatal error: 'stdlib.h' file not found
+    NIX_CFLAGS_COMPILE="$( echo ${clang.default_cxx_stdlib_compile} ) $NIX_CFLAGS_COMPILE"
+
     $SWIFT_SOURCE_ROOT/swift/utils/build-script \
       --preset=buildbot_linux \
       installable_package=$INSTALLABLE_PACKAGE \
@@ -126,6 +132,20 @@ sources = {
       install_destdir=$SWIFT_INSTALL_DIR \
       extra_cmake_options="${stdenv.lib.concatStringsSep "," cmakeFlags}"'';
 
+  # from llvm/4/llvm.nix
+  sigaltstackPatch = fetchpatch {
+    name = "sigaltstack.patch"; # for glibc-2.26
+    url = https://github.com/llvm-mirror/compiler-rt/commit/8a5e425a68d.diff;
+    sha256 = "0h4y5vl74qaa7dl54b1fcyqalvlpd8zban2d1jxfkxpzyi7m8ifi";
+  };
+
+  # https://bugs.swift.org/browse/SR-6409
+  sigunusedPatch = fetchpatch {
+    name = "sigunused.patch";
+    url = "https://github.com/apple/swift-llbuild/commit/303a89bc6da606c115560921a452686aa0655f5e.diff";
+    sha256 = "04sw7ym1grzggj1v3xrzr2ljxz8rf9rnn9n5fg1xjbwlrdagkc7m";
+  };
+
 in
 stdenv.mkDerivation rec {
   name = "swift-${version_friendly}";
@@ -145,6 +165,8 @@ stdenv.mkDerivation rec {
     rsync
     which
     findutils
+    makeWrapper
+    gnumake
   ] ++ stdenv.lib.optional stdenv.needsPax paxctl;
 
   # TODO: Revisit what's propagated and how
@@ -198,6 +220,14 @@ stdenv.mkDerivation rec {
     # Just patch all the things for now, we can focus this later
     patchShebangs $SWIFT_SOURCE_ROOT
 
+    # TODO eliminate use of env.
+    find -type f -print0 | xargs -0 sed -i \
+      -e 's|/usr/bin/env|${coreutils}/bin/env|g' \
+      -e 's|/usr/bin/make|${gnumake}/bin/make|g' \
+      -e 's|/bin/mkdir|${coreutils}/bin/mkdir|g' \
+      -e 's|/bin/cp|${coreutils}/bin/cp|g' \
+      -e 's|/usr/bin/file|${file}/bin/file|g'
+
     substituteInPlace swift/stdlib/public/Platform/CMakeLists.txt \
       --replace '/usr/include' "${stdenv.cc.libc.dev}/include"
     substituteInPlace swift/utils/build-script-impl \
@@ -209,6 +239,13 @@ stdenv.mkDerivation rec {
     patch -p1 -d swift -i ${./patches/0002-build-presets-linux-allow-custom-install-prefix.patch}
     patch -p1 -d swift -i ${./patches/0003-build-presets-linux-disable-tests.patch}
     patch -p1 -d swift -i ${./patches/0004-build-presets-linux-plumb-extra-cmake-options.patch}
+    # https://sourceware.org/glibc/wiki/Release/2.26#Removal_of_.27xlocale.h.27
+    patch -p1 -i ${./patches/remove_xlocale.patch}
+    # https://bugs.swift.org/browse/SR-4633
+    patch -p1 -d swift -i ${./patches/icu59.patch}
+
+    # https://bugs.swift.org/browse/SR-5779
+    sed -i -e 's|"-latomic"|"-Wl,-rpath,${clang.cc.gcc.lib}/lib" "-L${clang.cc.gcc.lib}/lib" "-latomic"|' swift/cmake/modules/AddSwift.cmake
 
     substituteInPlace clang/lib/Driver/ToolChains.cpp \
       --replace '  addPathIfExists(D, SysRoot + "/usr/lib", Paths);' \
@@ -217,21 +254,21 @@ stdenv.mkDerivation rec {
 
     # Workaround hardcoded dep on "libcurses" (vs "libncurses"):
     sed -i 's,curses,ncurses,' llbuild/*/*/CMakeLists.txt
-    substituteInPlace llbuild/tests/BuildSystem/Build/basic.llbuild \
-      --replace /usr/bin/env $(type -p env)
 
     # This test fails on one of my machines, not sure why.
     # Disabling for now. 
     rm llbuild/tests/Examples/buildsystem-capi.llbuild
 
-    substituteInPlace swift-corelibs-foundation/lib/script.py \
-      --replace /bin/cp $(type -p cp)
-
     PREFIX=''${out/#\/}
     substituteInPlace swift-corelibs-xctest/build_script.py \
       --replace usr "$PREFIX"
     substituteInPlace swiftpm/Utilities/bootstrap \
       --replace "usr" "$PREFIX"
+  '' + stdenv.lib.optionalString (stdenv ? glibc) ''
+    patch -p1 -d compiler-rt -i ${sigaltstackPatch}
+    patch -p1 -d compiler-rt -i ${./patches/sigaltstack.patch}
+    patch -p1 -d llbuild -i ${sigunusedPatch}
+    patch -p1 -i ${./patches/sigunused.patch}
   '';
 
   doCheck = false;
@@ -251,6 +288,10 @@ stdenv.mkDerivation rec {
     # TODO: Use wrappers to get these on the PATH for swift tools, instead
     ln -s ${clang}/bin/* $out/bin/
     ln -s ${targetPackages.stdenv.cc.bintools}/bin/ar $out/bin/ar
+
+    wrapProgram $out/bin/swift \
+      --suffix C_INCLUDE_PATH : $out/lib/swift/clang/include \
+      --suffix CPLUS_INCLUDE_PATH : $out/lib/swift/clang/include
   '';
 
   # Hack to avoid TMPDIR in RPATHs.
@@ -263,7 +304,6 @@ stdenv.mkDerivation rec {
     license = licenses.asl20;
     # Swift doesn't support 32bit Linux, unknown on other platforms.
     platforms = [ "x86_64-linux" ];
-    broken = true;
   };
 }
 
diff --git a/pkgs/development/compilers/swift/patches/0002-build-presets-linux-allow-custom-install-prefix.patch b/pkgs/development/compilers/swift/patches/0002-build-presets-linux-allow-custom-install-prefix.patch
index 0e18e8812a84..66723f1cdf39 100644
--- a/pkgs/development/compilers/swift/patches/0002-build-presets-linux-allow-custom-install-prefix.patch
+++ b/pkgs/development/compilers/swift/patches/0002-build-presets-linux-allow-custom-install-prefix.patch
@@ -11,13 +11,13 @@ diff --git a/utils/build-presets.ini b/utils/build-presets.ini
 index e6b0af3581..1095cbaab7 100644
 --- a/utils/build-presets.ini
 +++ b/utils/build-presets.ini
-@@ -692,7 +692,7 @@ install-lldb
+@@ -708,7 +708,7 @@ install-lldb
  install-llbuild
  install-swiftpm
  install-xctest
 -install-prefix=/usr
 +install-prefix=%(install_prefix)s
- swift-install-components=autolink-driver;compiler;clang-builtin-headers;stdlib;swift-remote-mirror;sdk-overlay;license
+ swift-install-components=autolink-driver;compiler;clang-builtin-headers;stdlib;swift-remote-mirror;sdk-overlay;license;sourcekit-inproc
  build-swift-static-stdlib
  build-swift-static-sdk-overlay
 -- 
diff --git a/pkgs/development/compilers/swift/patches/icu59.patch b/pkgs/development/compilers/swift/patches/icu59.patch
new file mode 100644
index 000000000000..26337814cafa
--- /dev/null
+++ b/pkgs/development/compilers/swift/patches/icu59.patch
@@ -0,0 +1,113 @@
+--- a/stdlib/public/stubs/UnicodeNormalization.cpp
++++ b/stdlib/public/stubs/UnicodeNormalization.cpp
+@@ -86,11 +86,8 @@ ASCIICollation() {
+     for (unsigned char c = 0; c < 128; ++c) {
+       UErrorCode ErrorCode = U_ZERO_ERROR;
+       intptr_t NumCollationElts = 0;
+-#if defined(__CYGWIN__) || defined(_MSC_VER)
+       UChar Buffer[1];
+-#else
+-      uint16_t Buffer[1];
+-#endif
++
+       Buffer[0] = c;
+ 
+       UCollationElements *CollationIterator =
+@@ -127,18 +124,9 @@ swift::_swift_stdlib_unicode_compare_utf16_utf16(const uint16_t *LeftString,
+                                                  int32_t LeftLength,
+                                                  const uint16_t *RightString,
+                                                  int32_t RightLength) {
+-#if defined(__CYGWIN__) || defined(_MSC_VER)
+-  // ICU UChar type is platform dependent. In Cygwin, it is defined
+-  // as wchar_t which size is 2. It seems that the underlying binary
+-  // representation is same with swift utf16 representation.
+   return ucol_strcoll(GetRootCollator(),
+     reinterpret_cast<const UChar *>(LeftString), LeftLength,
+     reinterpret_cast<const UChar *>(RightString), RightLength);
+-#else
+-  return ucol_strcoll(GetRootCollator(),
+-    LeftString, LeftLength,
+-    RightString, RightLength);
+-#endif
+ }
+ 
+ /// Compares the strings via the Unicode Collation Algorithm on the root locale.
+@@ -156,12 +144,8 @@ swift::_swift_stdlib_unicode_compare_utf8_utf16(const unsigned char *LeftString,
+   UErrorCode ErrorCode = U_ZERO_ERROR;
+ 
+   uiter_setUTF8(&LeftIterator, reinterpret_cast<const char *>(LeftString), LeftLength);
+-#if defined(__CYGWIN__) || defined(_MSC_VER)
+   uiter_setString(&RightIterator, reinterpret_cast<const UChar *>(RightString),
+                   RightLength);
+-#else
+-  uiter_setString(&RightIterator, RightString, RightLength);
+-#endif
+ 
+   uint32_t Diff = ucol_strcollIter(GetRootCollator(),
+     &LeftIterator, &RightIterator, &ErrorCode);
+@@ -199,14 +183,10 @@ swift::_swift_stdlib_unicode_compare_utf8_utf8(const unsigned char *LeftString,
+ void *swift::_swift_stdlib_unicodeCollationIterator_create(
+     const __swift_uint16_t *Str, __swift_uint32_t Length) {
+   UErrorCode ErrorCode = U_ZERO_ERROR;
+-#if defined(__CYGWIN__) || defined(_MSC_VER)
+   UCollationElements *CollationIterator = ucol_openElements(
+     GetRootCollator(), reinterpret_cast<const UChar *>(Str), Length,
+     &ErrorCode);
+-#else
+-  UCollationElements *CollationIterator = ucol_openElements(
+-    GetRootCollator(), Str, Length, &ErrorCode);
+-#endif
++
+   if (U_FAILURE(ErrorCode)) {
+     swift::crash("_swift_stdlib_unicodeCollationIterator_create: ucol_openElements() failed.");
+   }
+@@ -244,17 +224,12 @@ swift::_swift_stdlib_unicode_strToUpper(uint16_t *Destination,
+                                         const uint16_t *Source,
+                                         int32_t SourceLength) {
+   UErrorCode ErrorCode = U_ZERO_ERROR;
+-#if defined(__CYGWIN__) || defined(_MSC_VER)
+   uint32_t OutputLength = u_strToUpper(reinterpret_cast<UChar *>(Destination),
+                                        DestinationCapacity,
+                                        reinterpret_cast<const UChar *>(Source),
+                                        SourceLength,
+                                        "", &ErrorCode);
+-#else
+-  uint32_t OutputLength = u_strToUpper(Destination, DestinationCapacity,
+-                                       Source, SourceLength,
+-                                       "", &ErrorCode);
+-#endif
++
+   if (U_FAILURE(ErrorCode) && ErrorCode != U_BUFFER_OVERFLOW_ERROR) {
+     swift::crash("u_strToUpper: Unexpected error uppercasing unicode string.");
+   }
+@@ -271,17 +246,12 @@ swift::_swift_stdlib_unicode_strToLower(uint16_t *Destination,
+                                         const uint16_t *Source,
+                                         int32_t SourceLength) {
+   UErrorCode ErrorCode = U_ZERO_ERROR;
+-#if defined(__CYGWIN__) || defined(_MSC_VER)
+   uint32_t OutputLength = u_strToLower(reinterpret_cast<UChar *>(Destination),
+                                        DestinationCapacity,
+                                        reinterpret_cast<const UChar *>(Source),
+                                        SourceLength,
+                                        "", &ErrorCode);
+-#else
+-  uint32_t OutputLength = u_strToLower(Destination, DestinationCapacity,
+-                                       Source, SourceLength,
+-                                       "", &ErrorCode);
+-#endif
++
+   if (U_FAILURE(ErrorCode) && ErrorCode != U_BUFFER_OVERFLOW_ERROR) {
+     swift::crash("u_strToLower: Unexpected error lowercasing unicode string.");
+   }
+@@ -300,9 +300,9 @@
+ 
+ swift::__swift_stdlib_UBreakIterator *swift::__swift_stdlib_ubrk_open(
+     swift::__swift_stdlib_UBreakIteratorType type, const char *locale,
+-    const UChar *text, int32_t textLength, __swift_stdlib_UErrorCode *status) {
++    const __swift_stdlib_UChar * text, __swift_int32_t textLength, __swift_stdlib_UErrorCode *status) {
+   return ptr_cast<swift::__swift_stdlib_UBreakIterator>(
+-      ubrk_open(static_cast<UBreakIteratorType>(type), locale, text, textLength,
++      ubrk_open(static_cast<UBreakIteratorType>(type), locale, reinterpret_cast<const UChar *>(text), textLength,
+                 ptr_cast<UErrorCode>(status)));
+ }
+ 
diff --git a/pkgs/development/compilers/swift/patches/remove_xlocale.patch b/pkgs/development/compilers/swift/patches/remove_xlocale.patch
new file mode 100644
index 000000000000..8ef7e3916962
--- /dev/null
+++ b/pkgs/development/compilers/swift/patches/remove_xlocale.patch
@@ -0,0 +1,54 @@
+--- a/swift/stdlib/public/SDK/os/os_trace_blob.c
++++ b/swift/stdlib/public/SDK/os/os_trace_blob.c
+@@ -14,7 +14,6 @@
+ #include <dispatch/dispatch.h>
+ #include <os/base.h>
+ #include <os/log.h>
+-#include <xlocale.h>
+ #include "os_trace_blob.h"
+ 
+ OS_NOINLINE
+
+--- a/swift/stdlib/public/stubs/Stubs.cpp
++++ b/swift/stdlib/public/stubs/Stubs.cpp
+@@ -61,7 +61,6 @@
+ #define strtof_l swift_strtof_l
+ #define strtold_l swift_strtold_l
+ #else
+-#include <xlocale.h>
+ #endif
+ #include <limits>
+ #include "llvm/ADT/StringExtras.h"
+
+--- a/swift-corelibs-foundation/CoreFoundation/String.subproj/CFStringDefaultEncoding.h
++++ b/swift-corelibs-foundation/CoreFoundation/String.subproj/CFStringDefaultEncoding.h
+@@ -20,7 +20,6 @@
+ #include <unistd.h>
+ #include <string.h>
+ #include <stdio.h>
+-#include <xlocale.h>
+ 
+ CF_EXTERN_C_BEGIN
+ 
+
+--- a/swift-corelibs-foundation/CoreFoundation/String.subproj/CFStringEncodings.c
++++ b/swift-corelibs-foundation/CoreFoundation/String.subproj/CFStringEncodings.c
+@@ -24,7 +24,6 @@
+ #include <unistd.h>
+ #include <string.h>
+ #include <stdio.h>
+-#include <xlocale.h>
+ #include <CoreFoundation/CFStringDefaultEncoding.h>
+ #endif
+ 
+
+--- a/swift-corelibs-foundation/CoreFoundation/Base.subproj/CFInternal.h
++++ b/swift-corelibs-foundation/CoreFoundation/Base.subproj/CFInternal.h
+@@ -95,7 +95,6 @@
+ #if DEPLOYMENT_TARGET_MACOSX || DEPLOYMENT_TARGET_EMBEDDED || DEPLOYMENT_TARGET_EMBEDDED_MINI || DEPLOYMENT_TARGET_LINUX || DEPLOYMENT_TARGET_FREEBSD
+ #if TARGET_OS_CYGWIN
+ #else
+-#include <xlocale.h>
+ #endif
+ #include <unistd.h>
+ #include <sys/time.h>
diff --git a/pkgs/development/compilers/swift/patches/sigaltstack.patch b/pkgs/development/compilers/swift/patches/sigaltstack.patch
new file mode 100644
index 000000000000..c529fa3777b3
--- /dev/null
+++ b/pkgs/development/compilers/swift/patches/sigaltstack.patch
@@ -0,0 +1,11 @@
+--- a/lib/esan/esan_sideline_linux.cpp
++++ b/lib/esan/esan_sideline_linux.cpp
+@@ -70,7 +70,7 @@ int SidelineThread::runSideline(void *Arg) {
+ 
+   // Set up a signal handler on an alternate stack for safety.
+   InternalScopedBuffer<char> StackMap(SigAltStackSize);
+-  struct sigaltstack SigAltStack;
++  stack_t SigAltStack;
+   SigAltStack.ss_sp = StackMap.data();
+   SigAltStack.ss_size = SigAltStackSize;
+   SigAltStack.ss_flags = 0;
diff --git a/pkgs/development/compilers/swift/patches/sigunused.patch b/pkgs/development/compilers/swift/patches/sigunused.patch
new file mode 100644
index 000000000000..2701d1a3ae25
--- /dev/null
+++ b/pkgs/development/compilers/swift/patches/sigunused.patch
@@ -0,0 +1,11 @@
+--- a/swiftpm/Sources/Basic/Process.swift
++++ b/swiftpm/Sources/Basic/Process.swift
+@@ -258,7 +258,7 @@ public func launch() throws {
+         // modify, so we have to take care about the set we use.
+         var mostSignals = sigset_t()
+         sigemptyset(&mostSignals)
+-        for i in 1 ..< SIGUNUSED {
++        for i in 1 ..< SIGSYS {
+             if i == SIGKILL || i == SIGSTOP {
+                 continue
+             }
diff --git a/pkgs/development/compilers/yap/default.nix b/pkgs/development/compilers/yap/default.nix
index 8e37dc76441b..d93da8cb9965 100644
--- a/pkgs/development/compilers/yap/default.nix
+++ b/pkgs/development/compilers/yap/default.nix
@@ -13,6 +13,8 @@ stdenv.mkDerivation rec {
 
   configureFlags = "--enable-tabling=yes";
 
+  NIX_CFLAGS_COMPILE = [ "-fpermissive" ];
+
   meta = {
     homepage = http://www.dcc.fc.up.pt/~vsc/Yap/;
     description = "A ISO-compatible high-performance Prolog compiler";
diff --git a/pkgs/development/compilers/yosys/default.nix b/pkgs/development/compilers/yosys/default.nix
index eb96acafb9e1..063fd71c0433 100644
--- a/pkgs/development/compilers/yosys/default.nix
+++ b/pkgs/development/compilers/yosys/default.nix
@@ -2,18 +2,24 @@
 , pkgconfig, tcl, readline, libffi, python3, bison, flex
 }:
 
+with builtins;
+
 stdenv.mkDerivation rec {
   name = "yosys-${version}";
-  version = "2018.02.04";
+  version = "2018.02.14";
 
   srcs = [
     (fetchFromGitHub {
       owner  = "yosyshq";
       repo   = "yosys";
-      rev    = "0659d9eac7b546ee6f5acab46dbc83c91d556a34";
-      sha256 = "1hy21gxcp3q3hlbh5sh46h2340r11fwalkb9if9sbpc9y3279njj";
+      rev    = "c1abd3b02cab235334342f3520e2535eb74c5792";
+      sha256 = "0pzrplv4p0qzy115rg19lxv4w274iby337zfd7hhlinnpx3gzqvw";
       name   = "yosys";
     })
+
+    # NOTE: the version of abc used here is synchronized with
+    # the one in the yosys Makefile of the version above;
+    # keep them the same for quality purposes.
     (fetchFromBitbucket {
       owner  = "alanmi";
       repo   = "abc";
@@ -27,6 +33,12 @@ stdenv.mkDerivation rec {
   enableParallelBuilding = true;
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ tcl readline libffi python3 bison flex ];
+
+  patchPhase = ''
+    substituteInPlace ./Makefile \
+      --replace 'echo UNKNOWN' 'echo ${substring 0 10 (elemAt srcs 0).rev}'
+  '';
+
   preBuild = ''
     chmod -R u+w ../yosys-abc
     ln -s ../yosys-abc abc
diff --git a/pkgs/development/compilers/z88dk/default.nix b/pkgs/development/compilers/z88dk/default.nix
new file mode 100644
index 000000000000..1590075dc2a0
--- /dev/null
+++ b/pkgs/development/compilers/z88dk/default.nix
@@ -0,0 +1,50 @@
+{ fetchFromGitHub, fetchpatch, stdenv, makeWrapper, unzip, libxml2, m4, uthash }:
+
+stdenv.mkDerivation rec {
+  name = "z88dk-${version}";
+  version = "20180217";
+  rev = "49a7c6032b2675af742f5b0b3aa5bd5260bdd814";
+  short_rev = "${builtins.substring 0 7 rev}";
+
+  src = fetchFromGitHub {
+    owner = "z88dk";
+    repo  = "z88dk";
+    inherit rev;
+    sha256 = "00vbklh6lkq1gyd08ig2vcg6c1mghvlwfx3vq3wldf34hcs3k4pp";
+  };
+
+  # https://github.com/z88dk/z88dk/pull/612
+  patches = [(fetchpatch {
+    url = "https://github.com/Mic92/z88dk/commit/5b4ca132fa1f31c9ac48cf2220358715739ca0b2.patch";
+    sha256 = "1p2l31j68p7jzykhkhd9iagn2lr08hdclk3cl9l32p1q6ghdipfv";
+  })];
+
+  postPatch = ''
+    # we dont rely on build.sh :
+    export PATH="$PWD/bin:$PATH" # needed to have zcc in testsuite
+    export ZCCCFG=$PWD/lib/config/
+  '';
+
+  makeFlags = [
+    "prefix=$(out)"
+    "git_rev=${short_rev}"
+    "version=${version}"
+    "git_count=0"
+  ];
+  nativeBuildInputs = [ makeWrapper unzip ];
+  buildInputs = [ libxml2 m4 uthash ];
+
+  preInstall = ''
+    mkdir -p $out/{bin,share}
+  '';
+
+  installTargets = "libs install";
+
+  meta = with stdenv.lib; {
+    homepage    = https://www.z88dk.org;
+    description = "z80 Development Kit";
+    license     = licenses.clArtistic;
+    maintainers = [ maintainers.genesis ];
+    platforms = [ "x86_64-linux" ];
+  };
+}
diff --git a/pkgs/development/compilers/zig/default.nix b/pkgs/development/compilers/zig/default.nix
index 6f0c6d19e450..cffc683f9e7b 100644
--- a/pkgs/development/compilers/zig/default.nix
+++ b/pkgs/development/compilers/zig/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub, cmake, llvmPackages_5, llvm_5 }:
+{ stdenv, fetchFromGitHub, cmake, llvmPackages }:
 
 stdenv.mkDerivation rec {
   version = "0.1.1";
@@ -11,7 +11,7 @@ stdenv.mkDerivation rec {
     sha256 = "01yqjyi25f99bfmxxwyh45k7j84z0zg7n9jl8gg0draf96mzdh06";
   };
 
-  buildInputs = [ cmake llvmPackages_5.clang-unwrapped llvm_5 ];
+  buildInputs = [ cmake llvmPackages.clang-unwrapped llvmPackages.llvm ];
 
   cmakeFlags = [
     "-DZIG_LIBC_INCLUDE_DIR=${stdenv.cc.libc_dev}/include"
diff --git a/pkgs/development/haskell-modules/configuration-common.nix b/pkgs/development/haskell-modules/configuration-common.nix
index b46da64c3421..acd485e332f6 100644
--- a/pkgs/development/haskell-modules/configuration-common.nix
+++ b/pkgs/development/haskell-modules/configuration-common.nix
@@ -281,6 +281,7 @@ self: super: {
   hashed-storage = dontCheck super.hashed-storage;
   hashring = dontCheck super.hashring;
   hath = dontCheck super.hath;
+  haxl = dontCheck super.haxl;                          # non-deterministic failure https://github.com/facebook/Haxl/issues/85
   haxl-facebook = dontCheck super.haxl-facebook;        # needs facebook credentials for testing
   hdbi-postgresql = dontCheck super.hdbi-postgresql;
   hedis = dontCheck super.hedis;
@@ -606,7 +607,7 @@ self: super: {
   };
 
   # Need newer versions of their dependencies than the ones we have in LTS-10.x.
-  cabal2nix = super.cabal2nix.override { hpack = self.hpack_0_24_0; };
+  cabal2nix = super.cabal2nix.override { hpack = self.hpack_0_27_0; };
   hlint = super.hlint.overrideScope (self: super: { haskell-src-exts = self.haskell-src-exts_1_20_1; });
 
   # https://github.com/bos/configurator/issues/22
@@ -832,7 +833,7 @@ self: super: {
       rev = "8b79823c32e234c161baec67fdf7907952ca62b8";
       sha256 = "0hyrcyssclkdfcw2kgcark8jl869snwnbrhr9k0a9sbpk72wp7nz";
     };
-  }).override { language-c = self.language-c_0_7_0; };
+  }).override { language-c = self.language-c_0_7_2; };
 
   # Needs pginit to function and pgrep to verify.
   tmp-postgres = overrideCabal super.tmp-postgres (drv: {
@@ -949,7 +950,7 @@ self: super: {
   ChasingBottoms = dontCheck super.ChasingBottoms;
 
   # Add support for https://github.com/haskell-hvr/multi-ghc-travis.
-  multi-ghc-travis = self.callPackage ../tools/haskell/multi-ghc-travis { ShellCheck = self.ShellCheck_0_4_6; };
+  multi-ghc-travis = self.callPackage ../tools/haskell/multi-ghc-travis {};
 
   # https://github.com/yesodweb/Shelly.hs/issues/162
   shelly = dontCheck super.shelly;
@@ -965,38 +966,44 @@ self: super: {
   hledger = overrideCabal super.hledger (drv: {
     postInstall = ''
       for i in $(seq 1 9); do
-        for j in $data/share/${self.ghc.name}/${pkgs.stdenv.system}-${self.ghc.name}/*/*.$i $data/share/${self.ghc.name}/${pkgs.stdenv.system}-${self.ghc.name}/*/.otherdocs/*.$i; do
+        for j in $data/share/${self.ghc.name}/*-${self.ghc.name}/*/*.$i $data/share/${self.ghc.name}/*-${self.ghc.name}/*/.otherdocs/*.$i; do
           mkdir -p $out/share/man/man$i
           cp $j $out/share/man/man$i/
         done
       done
-      mkdir $out/share/info
-      cp $data/share/${self.ghc.name}/${pkgs.stdenv.system}-${self.ghc.name}/*/*.info $out/share/info/
+      mkdir -p $out/share/info
+      cp $data/share/${self.ghc.name}/*-${self.ghc.name}/*/*.info $out/share/info/
     '';
   });
   hledger-ui = overrideCabal super.hledger-ui (drv: {
     postInstall = ''
       for i in $(seq 1 9); do
-        for j in $data/share/${self.ghc.name}/${pkgs.stdenv.system}-${self.ghc.name}/*/*.$i $data/share/${self.ghc.name}/${pkgs.stdenv.system}-${self.ghc.name}/*/.otherdocs/*.$i; do
+        for j in $data/share/${self.ghc.name}/*-${self.ghc.name}/*/*.$i $data/share/${self.ghc.name}/*-${self.ghc.name}/*/.otherdocs/*.$i; do
           mkdir -p $out/share/man/man$i
           cp $j $out/share/man/man$i/
         done
       done
-      mkdir $out/share/info
-      cp $data/share/${self.ghc.name}/${pkgs.stdenv.system}-${self.ghc.name}/*/*.info $out/share/info/
+      mkdir -p $out/share/info
+      cp $data/share/${self.ghc.name}/*-${self.ghc.name}/*/*.info $out/share/info/
     '';
   });
   hledger-web = overrideCabal super.hledger-web (drv: {
     postInstall = ''
       for i in $(seq 1 9); do
-        for j in $data/share/${self.ghc.name}/${pkgs.stdenv.system}-${self.ghc.name}/*/*.$i $data/share/${self.ghc.name}/${pkgs.stdenv.system}-${self.ghc.name}/*/.otherdocs/*.$i; do
+        for j in $data/share/${self.ghc.name}/*-${self.ghc.name}/*/*.$i $data/share/${self.ghc.name}/*-${self.ghc.name}/*/.otherdocs/*.$i; do
           mkdir -p $out/share/man/man$i
           cp $j $out/share/man/man$i/
         done
       done
-      mkdir $out/share/info
-      cp $data/share/${self.ghc.name}/${pkgs.stdenv.system}-${self.ghc.name}/*/*.info $out/share/info/
+      mkdir -p $out/share/info
+      cp $data/share/${self.ghc.name}/*-${self.ghc.name}/*/*.info $out/share/info/
     '';
   });
 
+  # https://github.com/nick8325/twee/pull/1
+  twee-lib = dontHaddock super.twee-lib;
+
+  # Needs older hlint
+  hpio = dontCheck super.hpio;
+
 }
diff --git a/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix b/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix
index fc41fc0b3d30..56f61fddb33e 100644
--- a/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix
+++ b/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix
@@ -186,6 +186,7 @@ self: super: {
   attoparsec = addBuildDepends super.attoparsec (with self; [semigroups fail]);
   bytes = addBuildDepend super.bytes self.doctest;
   case-insensitive = addBuildDepend super.case-insensitive self.semigroups;
+  contravariant = addBuildDepend super.contravariant self.semigroups;
   dependent-map = addBuildDepend super.dependent-map self.semigroups;
   distributive = addBuildDepend (dontCheck super.distributive) self.semigroups;
   Glob = addBuildDepends super.Glob (with self; [semigroups]);
diff --git a/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix b/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix
index 49c8ac0d0050..3e8ff6b73eaa 100644
--- a/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix
+++ b/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix
@@ -42,8 +42,610 @@ self: super: {
   unix = null;
   xhtml = null;
 
-  # GHC 8.4.x needs newer versions than LTS-10.x offers by default.
-  hspec = dontCheck super.hspec_2_4_7;        # test suite causes an infinite loop
-  test-framework = self.test-framework_0_8_2_0;
+  # Undo the override in `configuration-common.nix`: GHC 8.4 bumps Cabal to 2.1:
+  # Distribution/Simple/CCompiler.hs:64:10: error:
+  #  • No instance for (Semigroup CDialect)
+  #      arising from the superclasses of an instance declaration
+  #  • In the instance declaration for ‘Monoid CDialect’
+  #     |
+  #  64 | instance Monoid CDialect where
+  #     |          ^^^^^^^^^^^^^^^
+  jailbreak-cabal = super.jailbreak-cabal.override { Cabal = self.Cabal; }; #pkgs.haskell.packages.ghc822.jailbreak-cabal;
 
+  ## Shadowed:
+
+  ## Needs bump to a versioned attribute
+  ##     • Could not deduce (Semigroup (Dict a))
+  ##         arising from the superclasses of an instance declaration
+  ##       from the context: a
+  constraints = super.constraints_0_10;
+
+  ## Needs bump to a versioned attribute
+  ## Issue: https://github.com/sol/doctest/issues/189
+  doctest = overrideCabal super.doctest_0_14_0 (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## ghc >=7.0 && <8.4
+    ##
+    ##        uncaught exception: IOException of type NoSuchThing (test/integration/testImport: changeWorkingDirectory: does not exist (No such file or directory))
+    doCheck         = false;
+  });
+
+  ## Needs bump to a versioned attribute
+  ##     • Could not deduce (Semigroup (IterT m a))
+  ##         arising from the superclasses of an instance declaration
+  ##       from the context: (Monad m, Monoid a)
+  free = super.free_5;
+
+  ## Needs bump to a versioned attribute
+  ## Needed for (<>) in prelude
+  funcmp = super.funcmp_1_9;
+
+  ## Needs bump to a versioned attribute
+  hspec = overrideCabal super.hspec_2_4_8 (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## hspec-core ==2.4.4, hspec-discover ==2.4.4
+    ##
+    ## error: while evaluating the attribute ‘buildInputs’ of the derivation ‘hspec-2.4.8’ at /home/deepfire/src/nixpkgs/pkgs/stdenv/generic/make-derivation.nix:148:11:
+    ## while evaluating the attribute ‘buildInputs’ of the derivation ‘stringbuilder-0.5.1’ at /home/deepfire/src/nixpkgs/pkgs/stdenv/generic/make-derivation.nix:148:11:
+    ## infinite recursion encountered, at undefined position
+    ## test suite causes an infinite loop
+    doCheck         = false;
+  });
+
+  ## Needs bump to a versioned attribute
+  hspec-core = overrideCabal super.hspec-core_2_4_8 (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## QuickCheck >=2.5.1 && <2.11
+    ##
+    ## error: while evaluating the attribute ‘buildInputs’ of the derivation ‘hspec-core-2.4.8’ at /home/deepfire/src/nixpkgs/pkgs/stdenv/generic/make-derivation.nix:148:11:
+    ## while evaluating the attribute ‘buildInputs’ of the derivation ‘silently-1.2.5’ at /home/deepfire/src/nixpkgs/pkgs/stdenv/generic/make-derivation.nix:148:11:
+    ## while evaluating the attribute ‘buildInputs’ of the derivation ‘temporary-1.2.1.1’ at /home/deepfire/src/nixpkgs/pkgs/stdenv/generic/make-derivation.nix:148:11:
+    ## while evaluating the attribute ‘buildInputs’ of the derivation ‘base-compat-0.9.3’ at /home/deepfire/src/nixpkgs/pkgs/stdenv/generic/make-derivation.nix:148:11:
+    ## while evaluating the attribute ‘propagatedBuildInputs’ of the derivation ‘hspec-2.4.8’ at /home/deepfire/src/nixpkgs/pkgs/stdenv/generic/make-derivation.nix:148:11:
+    ## infinite recursion encountered, at undefined position
+    doCheck         = false;
+  });
+
+  ## Needs bump to a versioned attribute
+  ## breaks hspec:
+  ## Setup: Encountered missing dependencies:
+  ## hspec-discover ==2.4.7
+  hspec-discover = super.hspec-discover_2_4_8;
+
+  ## Needs bump to a versioned attribute
+  ##     Ambiguous occurrence ‘<>’
+  ##     It could refer to either ‘Prelude.<>’,
+  ##                              imported from ‘Prelude’ at src/Language/C/Pretty.hs:15:8-24
+  language-c = super.language-c_0_7_2;
+
+  ## Needs bump to a versioned attribute
+  ## Setup: Encountered missing dependencies:
+  ## free ==4.*, template-haskell >=2.4 && <2.13
+  lens = super.lens_4_16;
+
+  ## Needs bump to a versioned attribute
+  QuickCheck = super.QuickCheck_2_11_3;
+
+  ## Needs bump to a versioned attribute
+  ## Setup: Encountered missing dependencies:
+  ## doctest >=0.11.1 && <0.14
+  semigroupoids = super.semigroupoids_5_2_2;
+
+  ## Needs bump to a versioned attribute
+  ##     • No instance for (Semigroup Builder)
+  ##         arising from the superclasses of an instance declaration
+  ##     • In the instance declaration for ‘Monoid Builder’
+  stringbuilder = super.stringbuilder_0_5_1;
+
+  ## Needs bump to a versioned attribute
+  ## Issue: https://github.com/haskell/test-framework/issues/35
+  test-framework = overrideCabal super.test-framework_0_8_2_0 (drv: {
+    ##     • No instance for (Semigroup (TestOptions' Maybe))
+    ##         arising from the superclasses of an instance declaration
+    ##     • In the instance declaration for ‘Monoid (TestOptions' Maybe)’
+    ##
+    ## Setup: Encountered missing dependencies:
+    ## QuickCheck >=2.3 && <2.10
+    doCheck         = false;
+  });
+
+  ## Needs bump to a versioned attribute
+  ##     Module ‘Data.Semigroup’ does not export ‘Monoid(..)’
+  ##    |
+  ## 80 | import Data.Semigroup (Semigroup(..), Monoid(..))
+  unordered-containers = super.unordered-containers_0_2_9_0;
+
+
+  ## On Hackage:
+
+  ## On Hackage, awaiting for import
+  tasty = overrideCabal super.tasty (drv: {
+    ##     • No instance for (Semigroup OptionSet)
+    ##         arising from the superclasses of an instance declaration
+    ##     • In the instance declaration for ‘Monoid OptionSet’
+    version         = "1.0.0.1";
+    sha256          = "0ggqffw9kbb6nlq1pplk131qzxndqqzqyf4s2p7576nljx11a7qf";
+  });
+
+
+  ## Upstreamed
+
+  ## Upstreamed, awaiting a Hackage release
+  haskell-gi = overrideCabal super.haskell-gi (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## haskell-gi-base ==0.20.*
+    src = pkgs.fetchFromGitHub {
+      owner  = "haskell-gi";
+      repo   = "haskell-gi";
+      rev    = "30d2e6415c5b57760f8754cd3003eb07483d60e6";
+      sha256 = "1l3qm97gcjih695hhj80rbpnd72prnc81lg5y373yj8jk9f6ypbr";
+    };
+  });
+
+  ## Upstreamed, awaiting a Hackage release
+  haskell-gi-base = overrideCabal super.haskell-gi-base (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## haskell-gi-base ==0.21.*
+    ## cannot build derivation ‘/nix/store/qvnrni6j2sz8z26kmjz1hgxfxvggkvjl-gi-cairo-1.0.14.drv’: 1 dependencies couldn't be built
+    src = pkgs.fetchFromGitHub {
+      owner  = "haskell-gi";
+      repo   = "haskell-gi";
+      rev    = "30d2e6415c5b57760f8754cd3003eb07483d60e6";
+      sha256 = "1l3qm97gcjih695hhj80rbpnd72prnc81lg5y373yj8jk9f6ypbr";
+    };
+    prePatch        = "cd base; ";
+  });
+
+  ## Upstreamed, awaiting a Hackage release
+  haskell-src-exts = overrideCabal super.haskell-src-exts (drv: {
+    ##     • Could not deduce (Semigroup (ParseResult m))
+    ##         arising from the superclasses of an instance declaration
+    ##       from the context: Monoid m
+    src = pkgs.fetchFromGitHub {
+      owner  = "haskell-suite";
+      repo   = "haskell-src-exts";
+      rev    = "935f6f0915e89c314b686bdbdc6980c72335ba3c";
+      sha256 = "1v3c1bd5q07qncqfbikvs8h3r4dr500blm5xv3b4jqqv69f0iam9";
+    };
+  });
+
+  ## Upstreamed, awaiting a Hackage release
+  lambdacube-compiler = overrideCabal super.lambdacube-compiler (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## aeson >=0.9 && <0.12,
+    ## base >=4.7 && <4.10,
+    ## directory ==1.2.*,
+    ## megaparsec ==5.0.*,
+    ## vector ==0.11.*
+    src = pkgs.fetchFromGitHub {
+      owner  = "lambdacube3d";
+      repo   = "lambdacube-compiler";
+      rev    = "ff6e3b136eede172f20ea8a0f7017ad1ecd029b8";
+      sha256 = "0srzrq5s7pdbygn7vdipxl12a3gbyb6bpa7frbh8zwhb9fz0jx5m";
+    };
+  });
+
+  ## Upstreamed, awaiting a Hackage release
+  lambdacube-ir = overrideCabal super.lambdacube-ir (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## aeson >=0.9 && <0.12, base >=4.8 && <4.10, vector ==0.11.*
+    src = pkgs.fetchFromGitHub {
+      owner  = "lambdacube3d";
+      repo   = "lambdacube-ir";
+      rev    = "b86318b510ef59606c5b7c882cad33af52ce257c";
+      sha256 = "0j4r6b32lcm6jg653xzg9ijxkfjahlb4x026mv5dhs18kvgqhr8x";
+    };
+    prePatch        = "cd lambdacube-ir.haskell; ";
+  });
+
+  ## Upstreamed, awaiting a Hackage release
+  simple-reflect = overrideCabal super.simple-reflect (drv: {
+    ##     • No instance for (Semigroup Expr)
+    ##         arising from the superclasses of an instance declaration
+    ##     • In the instance declaration for ‘Monoid Expr’
+    src = pkgs.fetchFromGitHub {
+      owner  = "twanvl";
+      repo   = "simple-reflect";
+      rev    = "c357e55da9a712dc5dbbfe6e36394e4ada2db310";
+      sha256 = "15q41b00l8y51xzhbj5zhddyh3gi7gvml033w8mm2fih458jf6yq";
+    };
+  });
+
+  ## Upstreamed, awaiting a Hackage release
+  singletons = overrideCabal super.singletons (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## th-desugar ==1.7.*
+    src = pkgs.fetchFromGitHub {
+      owner  = "goldfirere";
+      repo   = "singletons";
+      rev    = "23aa4bdaf05ce025a2493b35ec3c26cc94e3fdce";
+      sha256 = "0hw12v4z8jxmykc3j8z6g27swmfpxv40bgnx7nl0ialpwbz9mz27";
+    };
+  });
+
+  ## Upstreamed, awaiting a Hackage release
+  th-desugar = overrideCabal super.th-desugar (drv: {
+    ##     • Could not deduce (MonadIO (DsM q))
+    ##         arising from the 'deriving' clause of a data type declaration
+    ##       from the context: Quasi q
+    src = pkgs.fetchFromGitHub {
+      owner  = "goldfirere";
+      repo   = "th-desugar";
+      rev    = "4ca98c6492015e6ad063d3ad1a2ad6c4f0a56837";
+      sha256 = "1n3myd3gia9qsgdvrwqa023d3g7wkrhyv0wc8czwzz0lj9xzh7lw";
+    };
+  });
+
+  ## Upstreamed, awaiting a Hackage release
+  websockets = overrideCabal super.websockets (drv: {
+    ##     • No instance for (Semigroup SizeLimit)
+    ##         arising from the superclasses of an instance declaration
+    ##     • In the instance declaration for ‘Monoid SizeLimit’
+    src = pkgs.fetchFromGitHub {
+      owner  = "jaspervdj";
+      repo   = "websockets";
+      rev    = "11ba6d15cf47bace1936b13a58192e37908b0300";
+      sha256 = "1swphhnqvs5kh0wlqpjjgx9q91yxi6lasid8akdxp3gqll5ii2hf";
+    };
+  });
+
+
+  ## Unmerged
+
+  ## Unmerged.  PR: https://github.com/lpsmith/blaze-builder/pull/10
+  blaze-builder = overrideCabal super.blaze-builder (drv: {
+    ##     • No instance for (Semigroup Poke)
+    ##         arising from the superclasses of an instance declaration
+    ##     • In the instance declaration for ‘Monoid Poke’
+    src = pkgs.fetchFromGitHub {
+      owner  = "bgamari";
+      repo   = "blaze-builder";
+      rev    = "b7195f160795a081adbb9013810d843f1ba5e062";
+      sha256 = "1g351fdpsvn2lbqiy9bg2s0wwrdccb8q1zh7gvpsx5nnj24b1c00";
+    };
+  });
+
+  ## Unmerged.  PR: https://github.com/wrengr/bytestring-trie/pull/3
+  bytestring-trie = overrideCabal super.bytestring-trie (drv: {
+    ##     • Could not deduce (Semigroup (Trie a))
+    ##         arising from the superclasses of an instance declaration
+    ##       from the context: Monoid a
+    src = pkgs.fetchFromGitHub {
+      owner  = "RyanGlScott";
+      repo   = "bytestring-trie";
+      rev    = "e0ae0cb1ad40dedd560090d69cc36f9760797e29";
+      sha256 = "1jkdchvrca7dgpij5k4h1dy4qr1rli3fzbsqajwxmx9865rgiksl";
+    };
+    ## Setup: Encountered missing dependencies:
+    ## HUnit >=1.3.1.1 && <1.7,
+    ## QuickCheck >=2.4.1 && <2.11,
+    ## lazysmallcheck ==0.6.*,
+    ## smallcheck >=1.1.1 && <1.2
+    doCheck         = false;
+    ## Setup: Encountered missing dependencies:
+    ## data-or ==1.0.*
+    libraryHaskellDepends = drv.libraryHaskellDepends ++ [ self.data-or ];
+  });
+
+  ## Unmerged.  PR: https://github.com/gtk2hs/gtk2hs/pull/233
+  gtk2hs-buildtools = overrideCabal super.gtk2hs-buildtools (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## Cabal >=1.24.0.0 && <2.1
+    src = pkgs.fetchFromGitHub {
+      owner  = "deepfire";
+      repo   = "gtk2hs";
+      rev    = "08c68d5afc22dd5761ec2c92ebf49c6d252e545b";
+      sha256 = "06prn5wqq8x225n9wlbyk60f50jyjj8fm2hf181dyqjpf8wq75xa";
+    };
+    prePatch        = "cd tools; ";
+  });
+
+  ## Unmerged.  PR: https://github.com/gregorycollins/hashtables/pull/46
+  hashtables = overrideCabal super.hashtables (drv: {
+    ##     • No instance for (Semigroup Slot)
+    ##         arising from the superclasses of an instance declaration
+    ##     • In the instance declaration for ‘Monoid Slot’
+    src = pkgs.fetchFromGitHub {
+      owner  = "deepfire";
+      repo   = "hashtables";
+      rev    = "b9eb4b10a50bd6250330422afecc065339a32412";
+      sha256 = "0l4nplpvnzzf397zyh7j2k6yiqb46k6bdy00m4zzvhlfp7p1xkaw";
+    };
+  });
+
+  ## Unmerged.  PR: https://github.com/hanshoglund/monadplus/pull/3
+  monadplus = overrideCabal super.monadplus (drv: {
+    ##     • No instance for (Semigroup (Partial a b))
+    ##         arising from the superclasses of an instance declaration
+    ##     • In the instance declaration for ‘Monoid (Partial a b)’
+    src = pkgs.fetchFromGitHub {
+      owner  = "asr";
+      repo   = "monadplus";
+      rev    = "aa09f2473e2c906f2707b8a3fdb0a087405fd6fb";
+      sha256 = "0g37s3rih4i3vrn4kjwj12nq5lkpckmjw33xviva9gly2vg6p3xc";
+    };
+  });
+
+  ## Unmerged.  PR: https://github.com/reflex-frp/reflex/pull/158
+  reflex = overrideCabal super.reflex (drv: {
+    ##     • Could not deduce (Semigroup (Event t a))
+    ##         arising from the superclasses of an instance declaration
+    ##       from the context: (Semigroup a, Reflex t)
+    src = pkgs.fetchFromGitHub {
+      owner  = "deepfire";
+      repo   = "reflex";
+      rev    = "4fb50139db45a37493b91973eeaad9885b4c63ca";
+      sha256 = "0i7pp6cw394m2vbwcqv9z5ngdarp01sabqr1jkkgchxdkkii94nx";
+    };
+    ## haddock: internal error: internal: extractDecl (ClsInstD)
+    ## CallStack (from HasCallStack):
+    ##   error, called at utils/haddock/haddock-api/src/Haddock/Interface/Create.hs:1058:16 in main:Haddock.Interface.Create
+    doHaddock       = false;
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.7 && <4.11, bifunctors >=5.2 && <5.5
+    jailbreak       = true;
+    ## Setup: Encountered missing dependencies:
+    ## data-default -any,
+    ## lens -any,
+    ## monad-control -any,
+    ## prim-uniq -any,
+    ## reflection -any,
+    libraryHaskellDepends = drv.libraryHaskellDepends ++ [ self.data-default self.haskell-src-exts self.lens self.monad-control self.prim-uniq self.reflection self.split self.template-haskell self.unbounded-delays ];
+  });
+
+  ## Unmerged.  PR: https://github.com/ChrisKuklewicz/regex-tdfa/pull/13
+  regex-tdfa = overrideCabal super.regex-tdfa (drv: {
+    ##     • No instance for (Semigroup (CharMap a))
+    ##         arising from the superclasses of an instance declaration
+    ##     • In the instance declaration for ‘Monoid (CharMap a)’
+    src = pkgs.fetchFromGitHub {
+      owner  = "bgamari";
+      repo   = "regex-tdfa";
+      rev    = "34f4593a520176a917b74b8c7fcbbfbd72fb8178";
+      sha256 = "1aiklvf08w1hx2jn9n3sm61mfvdx4fkabszkjliapih2yjpmi3hq";
+    };
+  });
+
+  ## Unmerged.  PR: https://github.com/vincenthz/hs-securemem/pull/12
+  securemem = overrideCabal super.securemem (drv: {
+    ##     • No instance for (Semigroup SecureMem)
+    ##         arising from the superclasses of an instance declaration
+    ##     • In the instance declaration for ‘Monoid SecureMem’
+    src = pkgs.fetchFromGitHub {
+      owner  = "shlevy";
+      repo   = "hs-securemem";
+      rev    = "6168d90b00bfc6a559d3b9160732343644ef60fb";
+      sha256 = "06dhx1z44j5gshpdlsb4aryr3g4was3x4c2sgv1px8j57zrvlypx";
+    };
+  });
+
+  ## Unmerged.  PR: https://github.com/bos/text-format/pull/21
+  text-format = overrideCabal super.text-format (drv: {
+    ##     • No instance for (Semigroup Format)
+    ##         arising from the superclasses of an instance declaration
+    ##     • In the instance declaration for ‘Monoid Format’
+    src = pkgs.fetchFromGitHub {
+      owner  = "deepfire";
+      repo   = "text-format";
+      rev    = "a1cda87c222d422816f956c7272e752ea12dbe19";
+      sha256 = "0lyrx4l57v15rvazrmw0nfka9iyxs4wyaasjj9y1525va9s1z4fr";
+    };
+  });
+
+  ## Unmerged.  PR: https://github.com/ivan-m/wl-pprint-text/pull/17
+  wl-pprint-text = overrideCabal super.wl-pprint-text (drv: {
+    ##     Ambiguous occurrence ‘<>’
+    ##     It could refer to either ‘PP.<>’,
+    ##                              imported from ‘Prelude.Compat’ at Text/PrettyPrint/Leijen/Text/Monadic.hs:73:1-36
+    src = pkgs.fetchFromGitHub {
+      owner  = "deepfire";
+      repo   = "wl-pprint-text";
+      rev    = "615b83d1e5be52d1448aa1ab2517b431a617027b";
+      sha256 = "1p67v9s878br0r152h4n37smqhkg78v8zxhf4qm6d035s4rzj76i";
+    };
+  });
+
+
+  ## Non-code, configuration-only change
+
+  adjunctions = overrideCabal super.adjunctions (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## free ==4.*
+    jailbreak       = true;
+  });
+
+  async = overrideCabal super.async (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.3 && <4.11
+    jailbreak       = true;
+  });
+
+  bifunctors = overrideCabal super.bifunctors (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## template-haskell >=2.4 && <2.13
+    jailbreak       = true;
+  });
+
+  bindings-GLFW = overrideCabal super.bindings-GLFW (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## template-haskell >=2.10 && <2.13
+    jailbreak       = true;
+  });
+
+  cabal-doctest = overrideCabal super.cabal-doctest (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## Cabal >=1.10 && <2.1, base >=4.3 && <4.11
+    jailbreak       = true;
+  });
+
+  ChasingBottoms = overrideCabal super.ChasingBottoms (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## QuickCheck >=2.3 && <2.11, base >=4.2 && <4.11
+    jailbreak       = true;
+  });
+
+  deepseq-generics = overrideCabal super.deepseq-generics (drv: {
+    ## https://github.com/haskell-hvr/deepseq-generics/pull/4
+    jailbreak       = true;
+  });
+
+  doctest_0_14_0 = overrideCabal super.doctest_0_14_0 (drv: {
+    ##        uncaught exception: IOException of type NoSuchThing (test/integration/testImport: changeWorkingDirectory: does not exist (No such file or directory))
+    doCheck         = false;
+  });
+
+  exception-transformers = overrideCabal super.exception-transformers (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## HUnit >=1.2 && <1.6
+    jailbreak       = true;
+  });
+
+  hashable = overrideCabal super.hashable (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.4 && <4.11
+    jailbreak       = true;
+  });
+
+  hashable-time = overrideCabal super.hashable-time (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.7 && <4.11
+    jailbreak       = true;
+  });
+
+  haskell-src-meta = overrideCabal super.haskell-src-meta (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.6 && <4.11, template-haskell >=2.8 && <2.13
+    jailbreak       = true;
+  });
+
+  here = overrideCabal super.here (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.5 && <4.11
+    ## https://github.com/tmhedberg/here/pull/22
+    jailbreak       = true;
+  });
+
+  integer-logarithms = overrideCabal super.integer-logarithms (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.3 && <4.11
+    jailbreak       = true;
+  });
+
+  kan-extensions = overrideCabal super.kan-extensions (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## free ==4.*
+    jailbreak       = true;
+  });
+
+  keys = overrideCabal super.keys (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## free ==4.*
+    jailbreak       = true;
+  });
+
+  lambdacube-gl = overrideCabal super.lambdacube-gl (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## vector ==0.11.*
+    jailbreak       = true;
+  });
+
+  lifted-async = overrideCabal super.lifted-async (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.5 && <4.11
+    jailbreak       = true;
+  });
+
+  megaparsec = overrideCabal super.megaparsec (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## QuickCheck >=2.7 && <2.11
+    doCheck         = false;
+  });
+
+  newtype-generics = overrideCabal super.newtype-generics (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.6 && <4.11
+    jailbreak       = true;
+  });
+
+  ## Issue: https://github.com/pcapriotti/optparse-applicative/issues/288
+  optparse-applicative = overrideCabal super.optparse-applicative (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## QuickCheck >=2.8 && <2.11
+    doCheck         = false;
+  });
+
+  quickcheck-instances = overrideCabal super.quickcheck-instances (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.5 && <4.11
+    jailbreak       = true;
+  });
+
+  rapid = overrideCabal super.rapid (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.8 && <4.11
+    jailbreak       = true;
+  });
+
+  scientific = overrideCabal super.scientific (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## QuickCheck >=2.5 && <2.11
+    doCheck         = false;
+  });
+
+  tasty-expected-failure = overrideCabal super.tasty-expected-failure (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.5 && <4.11
+    jailbreak       = true;
+  });
+
+  tasty-hedgehog = overrideCabal super.tasty-hedgehog (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.8 && <4.11, tasty ==0.11.*
+    jailbreak       = true;
+  });
+
+  ## Issue: https://github.com/haskell/test-framework/issues/35
+  test-framework-quickcheck2 = overrideCabal super.test-framework-quickcheck2 (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## QuickCheck >=2.4 && <2.11
+    jailbreak       = true;
+  });
+
+  text-lens = overrideCabal super.text-lens (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.9.0.0 && <4.10,
+    ## extra >=1.4.10 && <1.5,
+    ## hspec >=2.2.4 && <2.3,
+    ## lens ==4.14.*
+    jailbreak       = true;
+  });
+
+  th-abstraction = overrideCabal super.th-abstraction (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## template-haskell >=2.5 && <2.13
+    jailbreak       = true;
+  });
+
+  these = overrideCabal super.these (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.5 && <4.11
+    jailbreak       = true;
+  });
+
+  unliftio-core = overrideCabal super.unliftio-core (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.5 && <4.11
+    jailbreak       = true;
+  });
+
+  vector-algorithms = overrideCabal super.vector-algorithms (drv: {
+    ##     • Ambiguous type variable ‘mv0’
+    doCheck         = false;
+  });
+
+  wavefront = overrideCabal super.wavefront (drv: {
+    ## Setup: Encountered missing dependencies:
+    ## base >=4.8 && <4.11
+    jailbreak       = true;
+  });
 }
diff --git a/pkgs/development/haskell-modules/configuration-hackage2nix.yaml b/pkgs/development/haskell-modules/configuration-hackage2nix.yaml
index b8839184c31f..9eed0a057777 100644
--- a/pkgs/development/haskell-modules/configuration-hackage2nix.yaml
+++ b/pkgs/development/haskell-modules/configuration-hackage2nix.yaml
@@ -38,7 +38,7 @@ core-packages:
   - ghcjs-base-0
 
 default-package-overrides:
-  # LTS Haskell 10.4
+  # LTS Haskell 10.5
   - abstract-deque ==0.3
   - abstract-deque-tests ==0.3
   - abstract-par ==0.3.3
@@ -64,7 +64,7 @@ default-package-overrides:
   - adler32 ==0.1.1.0
   - aern2-mp ==0.1.2.0
   - aern2-real ==0.1.1.0
-  - aeson ==1.2.3.0
+  - aeson ==1.2.4.0
   - aeson-better-errors ==0.9.1.0
   - aeson-casing ==0.1.0.5
   - aeson-compat ==0.3.7.1
@@ -256,8 +256,9 @@ default-package-overrides:
   - bencode ==0.6.0.0
   - bento ==0.1.0
   - between ==0.11.0.0
+  - bhoogle ==0.1.2.5
   - bibtex ==0.1.0.6
-  - bifunctors ==5.5
+  - bifunctors ==5.5.2
   - bimap ==0.3.3
   - bimap-server ==0.1.0.1
   - binary-bits ==0.5
@@ -305,7 +306,7 @@ default-package-overrides:
   - blaze-markup ==0.8.2.0
   - blaze-svg ==0.3.6.1
   - blaze-textual ==0.2.1.0
-  - bloodhound ==0.15.0.1
+  - bloodhound ==0.15.0.2
   - bloomfilter ==2.0.1.0
   - blosum ==0.1.1.4
   - bmp ==1.2.6.3
@@ -348,10 +349,10 @@ default-package-overrides:
   - bzlib-conduit ==0.2.1.5
   - c2hs ==0.28.3
   - Cabal ==2.0.1.1
-  - cabal-doctest ==1.0.5
+  - cabal-doctest ==1.0.6
   - cabal-file-th ==0.2.4
   - cabal-rpm ==0.12
-  - cabal-toolkit ==0.0.4
+  - cabal-toolkit ==0.0.5
   - cache ==0.1.0.1
   - cairo ==0.13.4.2
   - calendar-recycling ==0.0
@@ -428,7 +429,7 @@ default-package-overrides:
   - combinatorial ==0.0
   - comfort-graph ==0.0.2.1
   - commutative ==0.0.1.4
-  - comonad ==5.0.2
+  - comonad ==5.0.3
   - comonads-fd ==4.0
   - comonad-transformers ==4.0
   - compact ==0.1.0.1
@@ -439,19 +440,19 @@ default-package-overrides:
   - composable-associations-aeson ==0.1.0.0
   - composition ==1.0.2.1
   - composition-extra ==2.0.0
-  - concise ==0.1.0.0
+  - concise ==0.1.0.1
   - concurrency ==1.2.3.0
   - concurrent-extra ==0.7.0.11
-  - concurrent-output ==1.10.2
+  - concurrent-output ==1.10.3
   - concurrent-split ==0.0.1
   - concurrent-supply ==0.1.8
   - cond ==0.4.1.1
   - conduit ==1.2.13
   - conduit-algorithms ==0.0.7.1
   - conduit-combinators ==1.1.2
-  - conduit-connection ==0.1.0.3
+  - conduit-connection ==0.1.0.4
   - conduit-extra ==1.2.3.2
-  - conduit-iconv ==0.1.1.2
+  - conduit-iconv ==0.1.1.3
   - conduit-parse ==0.1.2.2
   - conduit-throttle ==0.3.1.0
   - ConfigFile ==1.1.4
@@ -508,7 +509,7 @@ default-package-overrides:
   - crypt-sha512 ==0
   - csp ==1.3.1
   - css-syntax ==0.0.5
-  - css-text ==0.1.2.2
+  - css-text ==0.1.3.0
   - csv ==0.1.2
   - csv-conduit ==0.6.7
   - ctrie ==0.2
@@ -560,7 +561,7 @@ default-package-overrides:
   - data-textual ==0.3.0.2
   - data-tree-print ==0.1.0.0
   - dataurl ==0.1.0.0
-  - DAV ==1.3.1
+  - DAV ==1.3.2
   - dawg-ord ==0.5.1.0
   - dbcleaner ==0.1.3
   - dbus ==0.10.15
@@ -581,7 +582,7 @@ default-package-overrides:
   - dhall-bash ==1.0.6
   - dhall-json ==1.0.9
   - dhall-nix ==1.0.9
-  - dhall-text ==1.0.4
+  - dhall-text ==1.0.5
   - diagrams ==1.4
   - diagrams-builder ==0.8.0.2
   - diagrams-cairo ==1.4
@@ -607,7 +608,7 @@ default-package-overrides:
   - disk-free-space ==0.1.0.1
   - disposable ==0.2.0.4
   - distance ==0.1.0.0
-  - distributed-closure ==0.3.4.0
+  - distributed-closure ==0.3.5
   - distributed-process ==0.7.3
   - distributed-process-simplelocalnet ==0.2.4
   - distributed-process-tests ==0.4.11
@@ -709,7 +710,7 @@ default-package-overrides:
   - eventstore ==0.15.0.2
   - every ==0.0.1
   - exact-combinatorics ==0.2.0.8
-  - exact-pi ==0.4.1.2
+  - exact-pi ==0.4.1.3
   - exceptional ==0.3.0.0
   - exception-mtl ==0.4.0.1
   - exceptions ==0.8.3
@@ -731,7 +732,7 @@ default-package-overrides:
   - fasta ==0.10.4.2
   - fast-builder ==0.0.1.0
   - fast-digits ==0.2.1.0
-  - fast-logger ==2.4.10
+  - fast-logger ==2.4.11
   - fast-math ==1.0.2
   - fb ==1.1.1
   - fclabels ==2.0.3.2
@@ -773,7 +774,7 @@ default-package-overrides:
   - focus ==0.1.5.2
   - fold-debounce ==0.2.0.6
   - fold-debounce-conduit ==0.1.0.5
-  - foldl ==1.3.5
+  - foldl ==1.3.7
   - folds ==0.7.4
   - follow-file ==0.0.2
   - FontyFruity ==0.5.3.3
@@ -788,7 +789,7 @@ default-package-overrides:
   - Frames ==0.3.0.2
   - free ==4.12.4
   - freenect ==1.2.1
-  - freer-simple ==1.0.0.0
+  - freer-simple ==1.0.1.1
   - freetype2 ==0.1.2
   - free-vl ==0.1.4
   - friday ==0.2.3.1
@@ -802,7 +803,7 @@ default-package-overrides:
   - funcmp ==1.8
   - functor-classes-compat ==1
   - fuzzcheck ==0.1.1
-  - fuzzyset ==0.1.0.4
+  - fuzzyset ==0.1.0.6
   - gauge ==0.1.3
   - gd ==3000.7.3
   - gdax ==0.6.0.0
@@ -818,7 +819,7 @@ default-package-overrides:
   - generics-sop ==0.3.2.0
   - generics-sop-lens ==0.1.2.1
   - generic-xmlpickler ==0.1.0.5
-  - geniplate-mirror ==0.7.5
+  - geniplate-mirror ==0.7.6
   - genvalidity ==0.4.0.4
   - genvalidity-aeson ==0.1.0.0
   - genvalidity-bytestring ==0.1.0.0
@@ -840,15 +841,15 @@ default-package-overrides:
   - ghc-compact ==0.1.0.0
   - ghc-core ==0.5.6
   - ghc-events ==0.7.0
-  - ghc-exactprint ==0.5.5.0
-  - ghcid ==0.6.9
+  - ghc-exactprint ==0.5.6.0
+  - ghcid ==0.6.10
   - ghcjs-base-stub ==0.1.0.4
   - ghcjs-codemirror ==0.0.0.1
   - ghcjs-dom ==0.9.2.0
   - ghcjs-dom-jsaddle ==0.9.2.0
   - ghcjs-perch ==0.3.3.2
   - ghc-paths ==0.1.0.9
-  - ghc-prof ==1.4.0.4
+  - ghc-prof ==1.4.1
   - ghc-syb-utils ==0.2.3.3
   - ghc-tcplugins-extra ==0.2.2
   - ghc-typelits-extra ==0.2.4
@@ -864,7 +865,7 @@ default-package-overrides:
   - giphy-api ==0.5.2.0
   - git ==0.2.1
   - github ==0.18
-  - github-release ==1.1.2
+  - github-release ==1.1.3
   - github-types ==0.2.1
   - github-webhook-handler ==0.0.8
   - github-webhook-handler-snap ==0.0.7
@@ -1027,12 +1028,12 @@ default-package-overrides:
   - hamlet ==1.2.0
   - HandsomeSoup ==0.4.2
   - handwriting ==0.1.0.3
-  - hapistrano ==0.3.5.1
+  - hapistrano ==0.3.5.2
   - happstack-hsp ==7.3.7.3
   - happstack-jmacro ==7.0.12
   - happstack-server ==7.5.0.1
-  - happstack-server-tls ==7.1.6.4
-  - happy ==1.19.8
+  - happstack-server-tls ==7.1.6.5
+  - happy ==1.19.9
   - harp ==0.4.3
   - hasbolt ==0.1.3.0
   - hashable ==1.2.6.1
@@ -1094,7 +1095,7 @@ default-package-overrides:
   - heaps ==0.3.6
   - heatshrink ==0.1.0.0
   - hebrew-time ==0.1.1
-  - hedgehog ==0.5.1
+  - hedgehog ==0.5.2
   - hedgehog-quickcheck ==0.1
   - hedis ==0.9.12
   - here ==1.2.12
@@ -1144,13 +1145,13 @@ default-package-overrides:
   - hosc ==0.16
   - hostname ==1.0
   - hostname-validate ==1.0.0
-  - hourglass ==0.2.10
+  - hourglass ==0.2.11
   - hourglass-orphans ==0.1.0.0
   - hp2pretty ==0.8.0.2
   - hpack ==0.21.2
   - hpc-coveralls ==1.0.10
   - HPDF ==1.4.10
-  - hpio ==0.9.0.3
+  - hpio ==0.9.0.5
   - hpp ==0.5.1
   - hpqtypes ==1.5.1.1
   - hprotoc ==2.4.6
@@ -1162,12 +1163,12 @@ default-package-overrides:
   - hsb2hs ==0.3.1
   - hs-bibutils ==6.2.0.1
   - hscolour ==1.24.2
-  - hsdns ==1.7
+  - hsdns ==1.7.1
   - hsebaysdk ==0.4.0.0
   - hse-cpp ==0.2
   - hsemail ==2
-  - HSet ==0.0.1
   - hset ==2.2.0
+  - HSet ==0.0.1
   - hsexif ==0.6.1.5
   - hs-GeoIP ==0.3
   - hsignal ==0.2.7.5
@@ -1203,7 +1204,7 @@ default-package-overrides:
   - hstatsd ==0.1
   - HStringTemplate ==0.8.6
   - HSvm ==0.1.0.3.22
-  - hsx2hs ==0.14.1.1
+  - hsx2hs ==0.14.1.2
   - hsx-jmacro ==7.3.8
   - hsyslog ==5.0.1
   - hsyslog-udp ==0.2.0
@@ -1216,15 +1217,15 @@ default-package-overrides:
   - htoml ==1.0.0.3
   - HTTP ==4000.3.9
   - http2 ==1.6.3
-  - http-api-data ==0.3.7.1
-  - http-client ==0.5.9
+  - http-api-data ==0.3.7.2
+  - http-client ==0.5.10
   - http-client-openssl ==0.2.1.1
-  - http-client-tls ==0.3.5.1
+  - http-client-tls ==0.3.5.3
   - http-common ==0.8.2.0
   - http-conduit ==2.2.4
   - http-date ==0.0.6.1
   - http-link-header ==1.0.3
-  - http-media ==0.7.1.1
+  - http-media ==0.7.1.2
   - http-reverse-proxy ==0.4.5
   - http-streams ==0.8.5.5
   - http-types ==0.9.1
@@ -1274,7 +1275,7 @@ default-package-overrides:
   - IfElse ==0.85
   - iff ==0.0.6
   - ignore ==0.1.1.0
-  - ihs ==0.1.0.1
+  - ihs ==0.1.0.2
   - ilist ==0.3.1.0
   - imagesize-conduit ==1.1
   - Imlib ==0.1.2
@@ -1286,7 +1287,7 @@ default-package-overrides:
   - indentation-parsec ==0.0.0.1
   - indents ==0.4.0.1
   - inflections ==0.4.0.1
-  - influxdb ==1.2.2.2
+  - influxdb ==1.2.2.3
   - ini ==0.3.5
   - inline-c ==0.6.0.5
   - inline-c-cpp ==0.2.1.0
@@ -1300,8 +1301,8 @@ default-package-overrides:
   - intern ==0.9.1.4
   - interpolate ==0.1.1
   - interpolatedstring-perl6 ==1.0.0
-  - interpolation ==0.1.0.2
   - Interpolation ==0.3.0
+  - interpolation ==0.1.0.2
   - IntervalMap ==0.5.3.1
   - intervals ==0.8.1
   - intro ==0.3.1.0
@@ -1322,8 +1323,8 @@ default-package-overrides:
   - IPv6DB ==0.2.4
   - ipython-kernel ==0.9.0.1
   - irc ==0.6.1.0
-  - irc-client ==1.0.1.0
-  - irc-conduit ==0.2.2.4
+  - irc-client ==1.0.1.1
+  - irc-conduit ==0.2.2.5
   - irc-ctcp ==0.1.3.0
   - irc-dcc ==2.0.1
   - islink ==0.1.0.0
@@ -1354,7 +1355,7 @@ default-package-overrides:
   - json-rpc-generic ==0.2.1.3
   - json-schema ==0.7.4.1
   - json-stream ==0.4.1.5
-  - JuicyPixels ==3.2.9.3
+  - JuicyPixels ==3.2.9.4
   - JuicyPixels-extra ==0.2.2
   - JuicyPixels-scale-dct ==0.1.1.2
   - justified-containers ==0.2.0.1
@@ -1364,7 +1365,7 @@ default-package-overrides:
   - kanji ==3.0.2
   - kansas-comet ==0.4
   - katip ==0.5.2.0
-  - katip-elasticsearch ==0.4.0.3
+  - katip-elasticsearch ==0.4.0.4
   - katydid ==0.1.1.0
   - kawhi ==0.3.0
   - kdt ==0.2.4
@@ -1386,7 +1387,7 @@ default-package-overrides:
   - language-haskell-extract ==0.2.4
   - language-java ==0.2.8
   - language-javascript ==0.6.0.10
-  - language-puppet ==1.3.13
+  - language-puppet ==1.3.14
   - lapack-carray ==0.0
   - lapack-ffi ==0.0
   - lapack-ffi-tools ==0.0.0.1
@@ -1396,7 +1397,7 @@ default-package-overrides:
   - lattices ==1.7
   - lazyio ==0.1.0.4
   - lazysmallcheck ==0.6
-  - lca ==0.3
+  - lca ==0.3.1
   - leancheck ==0.7.0
   - leapseconds-announced ==2017.1.0.1
   - lens ==4.15.4
@@ -1448,10 +1449,10 @@ default-package-overrides:
   - log-elasticsearch ==0.9.1.0
   - logfloat ==0.13.3.3
   - logger-thread ==0.1.0.2
-  - logging-effect ==1.2.1
-  - logging-effect-extra ==1.2.1
-  - logging-effect-extra-file ==1.1.1
-  - logging-effect-extra-handler ==1.1.1
+  - logging-effect ==1.2.3
+  - logging-effect-extra ==1.2.2
+  - logging-effect-extra-file ==1.1.2
+  - logging-effect-extra-handler ==1.1.2
   - logging-facade ==0.3.0
   - logging-facade-syslog ==1
   - logict ==0.6.0.2
@@ -1498,7 +1499,7 @@ default-package-overrides:
   - megaparsec ==6.3.0
   - mega-sdist ==0.3.0.6
   - memory ==0.14.11
-  - MemoTrie ==0.6.8
+  - MemoTrie ==0.6.9
   - mercury-api ==0.1.0.1
   - mersenne-random-pure64 ==0.2.2.0
   - messagepack ==0.5.4
@@ -1520,7 +1521,7 @@ default-package-overrides:
   - midi ==0.2.2.1
   - midi-music-box ==0.0.0.4
   - mighty-metropolis ==1.2.0
-  - milena ==0.5.2.0
+  - milena ==0.5.2.1
   - mime-mail ==0.4.14
   - mime-mail-ses ==0.4.0.0
   - mime-types ==0.1.0.7
@@ -1556,7 +1557,7 @@ default-package-overrides:
   - monadloc ==0.7.1
   - monad-logger ==0.3.28.1
   - monad-logger-json ==0.1.0.0
-  - monad-logger-prefix ==0.1.6
+  - monad-logger-prefix ==0.1.7
   - monad-logger-syslog ==0.1.4.0
   - monad-loops ==0.4.3
   - monad-memo ==0.4.1
@@ -1578,7 +1579,7 @@ default-package-overrides:
   - monad-time ==0.2
   - monad-unlift ==0.2.0
   - monad-unlift-ref ==0.2.1
-  - mongoDB ==2.3.0.1
+  - mongoDB ==2.3.0.2
   - monoidal-containers ==0.3.0.2
   - monoid-extras ==0.4.2
   - monoid-subclasses ==0.4.4
@@ -1599,7 +1600,7 @@ default-package-overrides:
   - murmur-hash ==0.1.0.9
   - MusicBrainz ==0.3.1
   - mustache ==2.3.0
-  - mutable-containers ==0.3.3
+  - mutable-containers ==0.3.4
   - mwc-probability ==1.3.0
   - mwc-random ==0.13.6.0
   - mwc-random-accelerate ==0.1.0.0
@@ -1614,7 +1615,7 @@ default-package-overrides:
   - nano-erl ==0.1.0.1
   - nanospec ==0.2.2
   - naqsha ==0.2.0.1
-  - nats ==1.1.1
+  - nats ==1.1.2
   - natural-sort ==0.1.2
   - natural-transformation ==0.4
   - ndjson-conduit ==0.1.0.5
@@ -1630,7 +1631,7 @@ default-package-overrides:
   - network-anonymous-i2p ==0.10.0
   - network-anonymous-tor ==0.11.0
   - network-attoparsec ==0.12.2
-  - network-carbon ==1.0.10
+  - network-carbon ==1.0.11
   - network-conduit-tls ==1.2.2
   - network-house ==0.1.0.2
   - network-info ==0.2.0.9
@@ -1684,7 +1685,7 @@ default-package-overrides:
   - once ==0.2
   - one-liner ==0.9.2
   - OneTuple ==0.2.1
-  - online ==0.2.0
+  - online ==0.2.1.0
   - Only ==0.1
   - oo-prototypes ==0.1.0.0
   - opaleye ==0.6.0.0
@@ -1721,7 +1722,7 @@ default-package-overrides:
   - parallel ==3.2.1.1
   - parallel-io ==0.3.3
   - parseargs ==0.2.0.8
-  - parsec ==3.1.11
+  - parsec ==3.1.13.0
   - parsec-numeric ==0.1.0.0
   - ParsecTools ==0.0.2.0
   - parser-combinators ==0.4.0
@@ -1760,7 +1761,7 @@ default-package-overrides:
   - persistent-postgresql ==2.6.3
   - persistent-refs ==0.4
   - persistent-sqlite ==2.6.4
-  - persistent-template ==2.5.3
+  - persistent-template ==2.5.3.1
   - pgp-wordlist ==0.1.0.2
   - pg-transact ==0.1.0.1
   - phantom-state ==0.2.1.2
@@ -1775,7 +1776,7 @@ default-package-overrides:
   - pipes-attoparsec ==0.5.1.5
   - pipes-bytestring ==2.1.6
   - pipes-category ==0.3.0.0
-  - pipes-concurrency ==2.0.8
+  - pipes-concurrency ==2.0.9
   - pipes-csv ==1.4.3
   - pipes-extras ==1.0.12
   - pipes-fastx ==0.3.0.0
@@ -1842,7 +1843,7 @@ default-package-overrides:
   - primitive ==0.6.3.0
   - printcess ==0.1.0.3
   - probability ==0.2.5.1
-  - process-extras ==0.7.3
+  - process-extras ==0.7.4
   - product-isomorphic ==0.0.3.1
   - product-profunctors ==0.8.0.3
   - profiterole ==0.1
@@ -1876,7 +1877,7 @@ default-package-overrides:
   - pure-io ==0.2.1
   - pureMD5 ==2.1.3
   - purescript-bridge ==0.11.1.2
-  - pusher-http-haskell ==1.5.1.0
+  - pusher-http-haskell ==1.5.1.2
   - pwstore-fast ==2.4.4
   - qchas ==1.0.1.0
   - qm-interpolated-string ==0.2.1.0
@@ -1885,7 +1886,7 @@ default-package-overrides:
   - QuickCheck ==2.10.1
   - quickcheck-arbitrary-adt ==0.2.0.0
   - quickcheck-assertions ==0.3.0
-  - quickcheck-classes ==0.3.1
+  - quickcheck-classes ==0.3.2
   - quickcheck-combinators ==0.0.2
   - quickcheck-instances ==0.3.16.1
   - quickcheck-io ==0.2.0
@@ -1979,7 +1980,7 @@ default-package-overrides:
   - rest-wai ==0.2.0.1
   - result ==0.2.6.0
   - rethinkdb-client-driver ==0.0.25
-  - retry ==0.7.5.1
+  - retry ==0.7.6.0
   - rev-state ==0.1.2
   - rfc5051 ==0.1.0.3
   - riak ==1.1.2.3
@@ -2007,8 +2008,8 @@ default-package-overrides:
   - say ==0.1.0.0
   - sbp ==2.3.6
   - sbv ==7.4
-  - SCalendar ==1.1.0
   - scalendar ==1.2.0
+  - SCalendar ==1.1.0
   - scalpel ==0.5.1
   - scalpel-core ==0.5.1
   - scanner ==0.2
@@ -2029,11 +2030,11 @@ default-package-overrides:
   - selda-sqlite ==0.1.6.0
   - semigroupoid-extras ==5
   - semigroupoids ==5.2.1
-  - semigroups ==0.18.3
+  - semigroups ==0.18.4
   - semiring-simple ==1.0.0.1
   - semver ==0.3.3.1
   - sendfile ==0.7.9
-  - sensu-run ==0.4.0.3
+  - sensu-run ==0.4.0.4
   - seqalign ==0.2.0.4
   - seqloc ==0.6.1.1
   - serf ==0.1.1.0
@@ -2079,7 +2080,7 @@ default-package-overrides:
   - SHA ==1.6.4.2
   - shake ==0.16
   - shake-language-c ==0.11.0
-  - shakespeare ==2.0.14.1
+  - shakespeare ==2.0.15
   - shell-conduit ==4.6.1
   - shell-escape ==0.2.0
   - shelly ==1.7.0.1
@@ -2092,7 +2093,7 @@ default-package-overrides:
   - simple ==0.11.2
   - simple-log ==0.9.3
   - simple-reflect ==0.3.2
-  - simple-sendfile ==0.2.26
+  - simple-sendfile ==0.2.27
   - simple-session ==0.10.1.1
   - simple-templates ==0.8.0.1
   - singleton-bool ==0.1.2.0
@@ -2156,7 +2157,7 @@ default-package-overrides:
   - StateVar ==1.1.0.4
   - stateWriter ==0.2.10
   - statistics ==0.14.0.2
-  - stm ==2.4.4.1
+  - stm ==2.4.5.0
   - stm-chans ==3.0.0.4
   - stm-conduit ==3.0.0
   - stm-containers ==0.2.16
@@ -2179,7 +2180,7 @@ default-package-overrides:
   - Stream ==0.4.7.2
   - streaming ==0.2.0.0
   - streaming-bytestring ==0.1.5
-  - streaming-commons ==0.1.18
+  - streaming-commons ==0.1.19
   - streamly ==0.1.0
   - streamproc ==1.6.2
   - streams ==3.3
@@ -2211,7 +2212,7 @@ default-package-overrides:
   - svg-tree ==0.6.2.1
   - swagger ==0.3.0
   - swagger2 ==2.2
-  - swagger-petstore ==0.0.1.7
+  - swagger-petstore ==0.0.1.8
   - swish ==0.9.1.10
   - syb ==0.7
   - syb-with-class ==0.6.1.8
@@ -2233,7 +2234,7 @@ default-package-overrides:
   - tar-conduit ==0.1.1
   - tardis ==0.4.1.0
   - tasty ==0.11.3
-  - tasty-ant-xml ==1.1.2
+  - tasty-ant-xml ==1.1.3
   - tasty-auto ==0.2.0.0
   - tasty-dejafu ==0.7.1.1
   - tasty-discover ==4.1.3
@@ -2247,7 +2248,7 @@ default-package-overrides:
   - tasty-kat ==0.0.3
   - tasty-program ==1.0.5
   - tasty-quickcheck ==0.9.1
-  - tasty-rerun ==1.1.9
+  - tasty-rerun ==1.1.10
   - tasty-silver ==3.1.11
   - tasty-smallcheck ==0.8.1
   - tasty-stats ==0.2.0.3
@@ -2282,7 +2283,7 @@ default-package-overrides:
   - text-generic-pretty ==1.2.1
   - text-icu ==0.7.0.1
   - text-latin1 ==0.3
-  - text-ldap ==0.1.1.10
+  - text-ldap ==0.1.1.11
   - textlocal ==0.1.0.5
   - text-manipulate ==0.2.0.1
   - text-metrics ==0.3.0
@@ -2301,7 +2302,7 @@ default-package-overrides:
   - these ==0.7.4
   - th-expand-syns ==0.4.4.0
   - th-extras ==0.0.0.4
-  - th-lift ==0.7.7
+  - th-lift ==0.7.8
   - th-lift-instances ==0.1.11
   - th-orphans ==0.13.5
   - thread-hierarchy ==0.3.0.0
@@ -2385,7 +2386,7 @@ default-package-overrides:
   - type-level-kv-list ==1.1.0
   - type-level-numbers ==0.1.1.1
   - typelits-witnesses ==0.2.3.0
-  - type-of-html ==1.3.2.1
+  - type-of-html ==1.3.3.0
   - type-operators ==0.1.0.4
   - type-spec ==0.3.0.1
   - typography-geometry ==1.0.0.1
@@ -2409,8 +2410,8 @@ default-package-overrides:
   - union-find ==0.2
   - uniplate ==1.6.12
   - uniq-deep ==1.1.0.0
-  - unique ==0
   - Unique ==0.4.7.2
+  - unique ==0
   - unit-constraint ==0.0.0
   - units-parser ==0.1.1.2
   - universe ==1.0
@@ -2465,7 +2466,7 @@ default-package-overrides:
   - vcswrapper ==0.1.6
   - vector ==0.12.0.1
   - vector-algorithms ==0.7.0.1
-  - vector-binary-instances ==0.2.3.5
+  - vector-binary-instances ==0.2.4
   - vector-buffer ==0.4.1
   - vector-builder ==0.3.4.1
   - vector-fftw ==0.1.3.8
@@ -2504,7 +2505,7 @@ default-package-overrides:
   - wai-middleware-crowd ==0.1.4.2
   - wai-middleware-metrics ==0.2.4
   - wai-middleware-prometheus ==0.3.0
-  - wai-middleware-rollbar ==0.8.2
+  - wai-middleware-rollbar ==0.8.3
   - wai-middleware-static ==0.8.1
   - wai-middleware-throttle ==0.2.2.0
   - wai-predicates ==0.10.0
@@ -2523,12 +2524,12 @@ default-package-overrides:
   - webdriver-angular ==0.1.11
   - webpage ==0.0.5
   - web-plugins ==0.2.9
-  - web-routes ==0.27.13
+  - web-routes ==0.27.14
   - web-routes-boomerang ==0.28.4.2
   - web-routes-happstack ==0.23.11
   - web-routes-hsp ==0.24.6.1
   - web-routes-th ==0.22.6.2
-  - web-routes-wai ==0.24.3
+  - web-routes-wai ==0.24.3.1
   - webrtc-vad ==0.1.0.3
   - websockets ==0.12.3.1
   - websockets-rpc ==0.6.0
@@ -2542,7 +2543,7 @@ default-package-overrides:
   - Win32 ==2.5.4.1
   - Win32-notify ==0.3.0.3
   - wire-streams ==0.1.1.0
-  - withdependencies ==0.2.4.1
+  - withdependencies ==0.2.4.2
   - witherable ==0.2
   - with-location ==0.1.0
   - witness ==0.4
@@ -2580,7 +2581,7 @@ default-package-overrides:
   - xeno ==0.3.2
   - xenstore ==0.1.1
   - xhtml ==3000.2.2
-  - xls ==0.1.0
+  - xls ==0.1.1
   - xlsx ==0.6.0
   - xlsx-tabular ==0.2.2
   - xml ==1.3.14
@@ -2705,7 +2706,6 @@ extra-packages:
   - QuickCheck < 2                      # required by test-framework-quickcheck and its users
   - seqid < 0.2                         # newer versions depend on transformers 0.4.x which we cannot provide in GHC 7.8.x
   - seqid-streams < 0.2                 # newer versions depend on transformers 0.4.x which we cannot provide in GHC 7.8.x
-  - ShellCheck == 0.4.6                 # required by multi-ghc-travis
   - split < 0.2                         # newer versions don't work with GHC 6.12.3
   - tar < 0.4.2.0                       # later versions don't work with GHC < 7.6.x
   - transformers == 0.4.3.*             # the latest version isn't supported by mtl yet
@@ -2979,6 +2979,7 @@ dont-distribute-packages:
   aeson-streams:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
   aeson-t:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   aeson-tiled:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
+  aeson-typescript:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
   AesonBson:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   affection:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   affine-invariant-ensemble-mcmc:               [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -3042,6 +3043,7 @@ dont-distribute-packages:
   angle:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   Animas:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   animate-example:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
+  animate:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   annah:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   anonymous-sums-tests:                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   anonymous-sums:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -3138,6 +3140,7 @@ dont-distribute-packages:
   atomo:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   atp-haskell:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   ats-format:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
+  ats-pkg:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   attic-schedule:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
   AttoBencode:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   AttoJson:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -3224,6 +3227,7 @@ dont-distribute-packages:
   barrier-monad:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
   base-generics:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
   base-io-access:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
+  base64-bytestring-type:                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   base64-conduit:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
   basic-sop:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   BASIC:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -3398,6 +3402,9 @@ dont-distribute-packages:
   breve:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   brians-brain:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   brick-skylighting:                            [ i686-linux, x86_64-linux, x86_64-darwin ]
+  bricks-parsec:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
+  bricks-rendering:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
+  bricks-syntax:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
   bricks:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   brillig:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   brittany:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -3784,10 +3791,12 @@ dont-distribute-packages:
   conductive-base:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   conductive-hsc3:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   conductive-song:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
+  conduit-algorithms:                           [ i686-linux, x86_64-linux, x86_64-darwin ]
   conduit-audio-lame:                           [ i686-linux, x86_64-linux, x86_64-darwin ]
   conduit-audio-samplerate:                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   conduit-find:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   conduit-network-stream:                       [ i686-linux, x86_64-linux, x86_64-darwin ]
+  conduit-zstd:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   conf:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   conffmt:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   config-parser:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -3947,6 +3956,7 @@ dont-distribute-packages:
   d3js:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   DAG-Tournament:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
   dag:                                          [ i686-linux, x86_64-linux, x86_64-darwin ]
+  damnpacket:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   Dangerous:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   dao:                                          [ i686-linux, x86_64-linux, x86_64-darwin ]
   Dao:                                          [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -4550,6 +4560,7 @@ dont-distribute-packages:
   fixed-precision:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   fixed-storable-array:                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   fixed-width:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
+  fixer:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   fixfile:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   fixie:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   fizzbuzz-as-a-service:                        [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -4713,6 +4724,7 @@ dont-distribute-packages:
   general-prelude:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   GeneralTicTacToe:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
   generators:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
+  generic-accessors:                            [ i686-linux, x86_64-linux, x86_64-darwin ]
   generic-binary:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
   generic-church:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
   generic-enum:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -4772,6 +4784,7 @@ dont-distribute-packages:
   ghc-exactprint:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
   ghc-generic-instances:                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   ghc-imported-from:                            [ i686-linux, x86_64-linux, x86_64-darwin ]
+  ghc-justdoit:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   ghc-man-completion:                           [ i686-linux, x86_64-linux, x86_64-darwin ]
   ghc-mod:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   ghc-parser:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -4825,6 +4838,7 @@ dont-distribute-packages:
   gist:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   git-all:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   git-checklist:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
+  git-config:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   git-date:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   git-fmt:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   git-freq:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -4891,6 +4905,7 @@ dont-distribute-packages:
   goatee:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   gochan:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   gofer-prelude:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
+  goggles-gcs:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   gogol-servicemanagement:                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   gooey:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   google-drive:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -4981,6 +4996,7 @@ dont-distribute-packages:
   gsl-random:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   gssapi-wai:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   gssapi:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
+  gstorable:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   gstreamer:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   GTALib:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   gtfs:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -5078,6 +5094,7 @@ dont-distribute-packages:
   hakyll-contrib-links:                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   hakyll-contrib:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
   hakyll-convert:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
+  hakyll-dir-list:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   hakyll-filestore:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
   hakyll-ogmarkup:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   hakyll-R:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -5141,6 +5158,7 @@ dont-distribute-packages:
   happybara-webkit-server:                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   happybara-webkit:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
   happybara:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
+  HappyTree:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   hapstone:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   HaPy:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   haquery:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -5544,6 +5562,7 @@ dont-distribute-packages:
   HMap:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   hmark:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   hmarkup:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
+  hmatrix-backprop:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
   hmatrix-banded:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
   hmatrix-mmap:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   hmatrix-morpheus:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -5577,6 +5596,7 @@ dont-distribute-packages:
   hocker:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   hodatime:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   HODE:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
+  Hoed:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   hofix-mtl:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   hog:                                          [ i686-linux, x86_64-linux, x86_64-darwin ]
   hogg:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -5624,6 +5644,7 @@ dont-distribute-packages:
   hp2any-graph:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   hp2any-manager:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
   hpack-convert:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
+  hpack-dhall:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   hpaco-lib:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   hpaco:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   hpage:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -5683,11 +5704,13 @@ dont-distribute-packages:
   hs-pgms:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   hs-pkpass:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   hs-re:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
+  hs-rs-notify:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   hs-scrape:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   hs-twitter:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   hs-twitterarchiver:                           [ i686-linux, x86_64-linux, x86_64-darwin ]
   hs-vcard:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   hs-watchman:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
+  hs2ats:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   hs2bf:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   hs2dot:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   Hs2lib:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -5747,8 +5770,10 @@ dont-distribute-packages:
   HSlippyMap:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   hslogger-reader:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   hslogstash:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
+  hsluv-haskell:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
   hsmagick:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   HSmarty:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
+  hsmodetweaks:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   Hsmtlib:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   hsmtpclient:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   hsnock:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -5817,6 +5842,7 @@ dont-distribute-packages:
   htestu:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   HTicTacToe:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   htlset:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
+  html-entities:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
   html-rules:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   html-tokenizer:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
   hts:                                          [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -5869,6 +5895,8 @@ dont-distribute-packages:
   huzzy:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   hVOIDP:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   hw-kafka-avro:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
+  hw-kafka-client:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
+  hw-kafka-conduit:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
   hwall-auth-iitk:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   hweblib:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   hwhile:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -6010,6 +6038,7 @@ dont-distribute-packages:
   interleavableIO:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   interlude-l:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   internetmarke:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
+  intero:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   interpol:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   interpolatedstring-qq-mwotton:                [ i686-linux, x86_64-linux, x86_64-darwin ]
   interpolatedstring-qq:                        [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -6141,6 +6170,7 @@ dont-distribute-packages:
   jsontsv:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   jsonxlsx:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   jspath:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
+  judge:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   judy:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   juicy-gcode:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   JuicyPixels-canvas:                           [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -6265,6 +6295,7 @@ dont-distribute-packages:
   lambdiff:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   lame-tester:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   lame:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
+  language-ats:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   language-bash:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
   language-boogie:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   language-c-comments:                          [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -6326,6 +6357,7 @@ dont-distribute-packages:
   leapseconds:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   learn-physics-examples:                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   learn-physics:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
+  Learning:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   leetify:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   legion-discovery-client:                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   legion-discovery:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -6575,7 +6607,9 @@ dont-distribute-packages:
   mandulia:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   mangopay:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   map-exts:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
+  Mapping:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   mappy:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
+  mapquest-api:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   marionetta:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   markdown-kate:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
   markdown2svg:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -6751,6 +6785,7 @@ dont-distribute-packages:
   MonadLab:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   monadLib-compose:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
   monadloc-pp:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
+  monadlog:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   monads-fd:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   MonadStack:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   monarch:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -6856,6 +6891,7 @@ dont-distribute-packages:
   mvc:                                          [ i686-linux, x86_64-linux, x86_64-darwin ]
   mvclient:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   mxnet-examples:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
+  mxnet-nn:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   mxnet-nnvm:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   mxnet:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   myanimelist-export:                           [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -6918,6 +6954,7 @@ dont-distribute-packages:
   netease-fm:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   netlines:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   netrc:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
+  netrium:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   NetSNMP:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   netspec:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   netstring-enumerator:                         [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -6970,6 +7007,7 @@ dont-distribute-packages:
   nikepub:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   nimber:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   Ninjas:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
+  nirum:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   nitro:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   nix-deploy:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   nix-diff:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -6999,6 +7037,7 @@ dont-distribute-packages:
   noodle:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   NoSlow:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   not-gloss-examples:                           [ i686-linux, x86_64-linux, x86_64-darwin ]
+  not-gloss:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   notcpp:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   notmuch-haskell:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   notmuch-web:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -7221,6 +7260,7 @@ dont-distribute-packages:
   peg:                                          [ i686-linux, x86_64-linux, x86_64-darwin ]
   peggy:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   pell:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
+  pencil:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   penny-bin:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   penny-lib:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   penny:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -7247,6 +7287,7 @@ dont-distribute-packages:
   persistent-protobuf:                          [ i686-linux, x86_64-linux, x86_64-darwin ]
   persistent-redis:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
   persistent-relational-record:                 [ i686-linux, x86_64-linux, x86_64-darwin ]
+  persistent-test:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   persistent-zookeeper:                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   persona-idp:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   persona:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -7295,6 +7336,7 @@ dont-distribute-packages:
   pipes-files:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   pipes-illumina:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
   pipes-io:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
+  pipes-kafka:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   pipes-key-value-csv:                          [ i686-linux, x86_64-linux, x86_64-darwin ]
   pipes-lzma:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   pipes-network-tls:                            [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -7327,6 +7369,7 @@ dont-distribute-packages:
   plivo:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   plocketed:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   plot-gtk-ui:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
+  Plot-ho-matic:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
   plot-lab:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   plot-light:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   ploton:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -7404,6 +7447,7 @@ dont-distribute-packages:
   potoki-core:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   potoki:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   powerpc:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
+  powerqueue-distributed:                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   PPrinter:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   pqc:                                          [ i686-linux, x86_64-linux, x86_64-darwin ]
   pqueue-mtl:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -7622,6 +7666,7 @@ dont-distribute-packages:
   rasa:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   rascal:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   Rasenschach:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
+  rattletrap:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   raven-haskell-scotty:                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   raw-feldspar:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   rawr:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -7867,6 +7912,7 @@ dont-distribute-packages:
   runtime-arbitrary:                            [ i686-linux, x86_64-linux, x86_64-darwin ]
   rws:                                          [ i686-linux, x86_64-linux, x86_64-darwin ]
   RxHaskell:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
+  s-cargot-letbind:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
   SableCC2Hs:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   safe-freeze:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   safe-globals:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -7972,6 +8018,7 @@ dont-distribute-packages:
   semiring-num:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   semiring:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   semver-range:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
+  sendgrid-v3:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   sensei:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   sensenet:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   sentence-jp:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -8014,7 +8061,9 @@ dont-distribute-packages:
   servant-proto-lens:                           [ i686-linux, x86_64-linux, x86_64-darwin ]
   servant-pushbullet-client:                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   servant-py:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
+  servant-quickcheck:                           [ i686-linux, x86_64-linux, x86_64-darwin ]
   servant-router:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
+  servant-ruby:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   servant-scotty:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
   servant-smsc-ru:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   servant-snap:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -8050,6 +8099,7 @@ dont-distribute-packages:
   shadowsocks:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   shady-gen:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   shady-graphics:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
+  shake-ats:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   shake-cabal-build:                            [ i686-linux, x86_64-linux, x86_64-darwin ]
   shake-extras:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   shake-minify:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -8111,6 +8161,7 @@ dont-distribute-packages:
   simple-sql-parser:                            [ i686-linux, x86_64-linux, x86_64-darwin ]
   simple-tabular:                               [ i686-linux, x86_64-linux, x86_64-darwin ]
   simple-tar:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
+  simple-vec3:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   simple-zipper:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
   simpleargs:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   SimpleGL:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -8276,6 +8327,7 @@ dont-distribute-packages:
   sparsebit:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   sparsecheck:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   spata:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
+  spatial-math:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   special-functors:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
   specialize-th:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
   spelling-suggest:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -8409,6 +8461,7 @@ dont-distribute-packages:
   strelka:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   StrictBench:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   strictly:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
+  string-isos:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   string-typelits:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   stringlike:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   stringprep:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -8441,6 +8494,7 @@ dont-distribute-packages:
   supercollider-midi:                           [ i686-linux, x86_64-linux, x86_64-darwin ]
   superconstraints:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
   superdoc:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
+  superevent:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   supero:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   superrecord:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   supervisor:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -8481,8 +8535,10 @@ dont-distribute-packages:
   syntax:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   SyntaxMacros:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   syntaxnet-haskell:                            [ i686-linux, x86_64-linux, x86_64-darwin ]
+  synthesizer-alsa:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
   synthesizer-filter:                           [ i686-linux, x86_64-linux, x86_64-darwin ]
   synthesizer-llvm:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
+  synthesizer-midi:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
   synthesizer:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   sys-process:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   Sysmon:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -8708,6 +8764,7 @@ dont-distribute-packages:
   tofromxml:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   toilet:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   tokenify:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
+  tokenizer-monad:                              [ i686-linux, x86_64-linux, x86_64-darwin ]
   toktok:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   tokyocabinet-haskell:                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   tokyotyrant-haskell:                          [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -8717,6 +8774,7 @@ dont-distribute-packages:
   Top:                                          [ i686-linux, x86_64-linux, x86_64-darwin ]
   topkata:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   torch:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
+  TORCS:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   touched:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   Tournament:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   toxcore:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -8798,6 +8856,7 @@ dont-distribute-packages:
   twhs:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   twidge:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   twilight-stm:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
+  twilio:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
   twill:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   twiml:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   twine:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -8962,6 +9021,7 @@ dont-distribute-packages:
   Vec-Boolean:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
   Vec-OpenGLRaw:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
   Vec-Transform:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
+  vec:                                          [ i686-linux, x86_64-linux, x86_64-darwin ]
   vect-floating-accelerate:                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   vect-floating:                                [ i686-linux, x86_64-linux, x86_64-darwin ]
   vect-opengl:                                  [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -8984,6 +9044,7 @@ dont-distribute-packages:
   verdict:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   verilog:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   vgrep:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
+  vicinity:                                     [ i686-linux, x86_64-linux, x86_64-darwin ]
   views:                                        [ i686-linux, x86_64-linux, x86_64-darwin ]
   vigilance:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   Villefort:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -9148,6 +9209,7 @@ dont-distribute-packages:
   ws:                                           [ i686-linux, x86_64-linux, x86_64-darwin ]
   wsdl:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
   wsedit:                                       [ i686-linux, x86_64-linux, x86_64-darwin ]
+  wsjtx-udp:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   wtk-gtk:                                      [ i686-linux, x86_64-linux, x86_64-darwin ]
   wtk:                                          [ i686-linux, x86_64-linux, x86_64-darwin ]
   wumpus-basic:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
@@ -9253,6 +9315,7 @@ dont-distribute-packages:
   yampa-canvas:                                 [ i686-linux, x86_64-linux, x86_64-darwin ]
   yampa-glfw:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   yampa-glut:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
+  yampa-sdl2:                                   [ i686-linux, x86_64-linux, x86_64-darwin ]
   yampa2048:                                    [ i686-linux, x86_64-linux, x86_64-darwin ]
   yandex-translate:                             [ i686-linux, x86_64-linux, x86_64-darwin ]
   yaop:                                         [ i686-linux, x86_64-linux, x86_64-darwin ]
diff --git a/pkgs/development/haskell-modules/configuration-nix.nix b/pkgs/development/haskell-modules/configuration-nix.nix
index 2320d6a8752a..edec2724d84d 100644
--- a/pkgs/development/haskell-modules/configuration-nix.nix
+++ b/pkgs/development/haskell-modules/configuration-nix.nix
@@ -258,7 +258,7 @@ self: super: builtins.intersectAttrs super {
       }
     );
 
-  llvm-hs = super.llvm-hs.override { llvm-config = pkgs.llvm_5; };
+  llvm-hs = super.llvm-hs.override { llvm-config = pkgs.llvm; };
 
   # Needs help finding LLVM.
   spaceprobe = addBuildTool super.spaceprobe self.llvmPackages.llvm;
diff --git a/pkgs/development/haskell-modules/generic-builder.nix b/pkgs/development/haskell-modules/generic-builder.nix
index eb66a6f89223..71b2d1288a01 100644
--- a/pkgs/development/haskell-modules/generic-builder.nix
+++ b/pkgs/development/haskell-modules/generic-builder.nix
@@ -72,8 +72,7 @@ assert enableSplitObjs == null;
 let
 
   inherit (stdenv.lib) optional optionals optionalString versionOlder versionAtLeast
-                       concatStringsSep enableFeature optionalAttrs toUpper
-                       filter makeLibraryPath;
+                       concatStringsSep enableFeature optionalAttrs toUpper;
 
   isGhcjs = ghc.isGhcjs or false;
   isHaLVM = ghc.isHaLVM or false;
@@ -192,7 +191,7 @@ assert allPkgconfigDepends != [] -> pkgconfig != null;
 stdenv.mkDerivation ({
   name = "${pname}-${version}";
 
-  outputs = if (args ? outputs) then args.outputs else ([ "out" ] ++ (optional enableSeparateDataOutput "data") ++ (optional enableSeparateDocOutput "doc"));
+  outputs = [ "out" ] ++ (optional enableSeparateDataOutput "data") ++ (optional enableSeparateDocOutput "doc");
   setOutputFlags = false;
 
   pos = builtins.unsafeGetAttrPos "pname" args;
@@ -384,7 +383,7 @@ stdenv.mkDerivation ({
     env = stdenv.mkDerivation {
       name = "interactive-${pname}-${version}-environment";
       buildInputs = systemBuildInputs;
-      nativeBuildInputs = [ ghcEnv ];
+      nativeBuildInputs = [ ghcEnv ] ++ nativeBuildInputs;
       LANG = "en_US.UTF-8";
       LOCALE_ARCHIVE = optionalString stdenv.isLinux "${glibcLocales}/lib/locale/locale-archive";
       shellHook = ''
@@ -392,9 +391,6 @@ stdenv.mkDerivation ({
         export NIX_${ghcCommandCaps}PKG="${ghcEnv}/bin/${ghcCommand}-pkg"
         # TODO: is this still valid?
         export NIX_${ghcCommandCaps}_DOCDIR="${ghcEnv}/share/doc/ghc/html"
-        export LD_LIBRARY_PATH="''${LD_LIBRARY_PATH:+''${LD_LIBRARY_PATH}:}${
-          makeLibraryPath (filter (x: !isNull x) systemBuildInputs)
-        }"
         ${if isHaLVM
             then ''export NIX_${ghcCommandCaps}_LIBDIR="${ghcEnv}/lib/HaLVM-${ghc.version}"''
             else ''export NIX_${ghcCommandCaps}_LIBDIR="${ghcEnv}/lib/${ghcCommand}-${ghc.version}"''}
diff --git a/pkgs/development/haskell-modules/hackage-packages.nix b/pkgs/development/haskell-modules/hackage-packages.nix
index 796cc5262dc2..5382e63bce61 100644
--- a/pkgs/development/haskell-modules/hackage-packages.nix
+++ b/pkgs/development/haskell-modules/hackage-packages.nix
@@ -505,9 +505,7 @@ self: {
      }) {};
 
   "ALUT" = callPackage
-    ({ mkDerivation, base, freealut, OpenAL, pretty, StateVar
-     , transformers
-     }:
+    ({ mkDerivation, base, freealut, OpenAL, StateVar, transformers }:
      mkDerivation {
        pname = "ALUT";
        version = "2.4.0.2";
@@ -516,7 +514,6 @@ self: {
        isExecutable = true;
        libraryHaskellDepends = [ base OpenAL StateVar transformers ];
        librarySystemDepends = [ freealut ];
-       executableHaskellDepends = [ base pretty ];
        homepage = "https://github.com/haskell-openal/ALUT";
        description = "A binding for the OpenAL Utility Toolkit";
        license = stdenv.lib.licenses.bsd3;
@@ -543,9 +540,10 @@ self: {
     ({ mkDerivation, base }:
      mkDerivation {
        pname = "ANum";
-       version = "0.1.1.0";
-       sha256 = "0ilgz1akz66cwwvxd8dkz2fq9gyplc4m206jpmp380ys5n37b4q9";
+       version = "0.2.0.2";
+       sha256 = "06mvkp9b0hxlp1w2yp7bb6340l88mzs15azx7nma401icqdhvbpn";
        libraryHaskellDepends = [ base ];
+       testHaskellDepends = [ base ];
        homepage = "https://github.com/DanBurton/ANum#readme";
        description = "Num instance for Applicatives provided via the ANum newtype";
        license = stdenv.lib.licenses.bsd3;
@@ -753,8 +751,8 @@ self: {
        pname = "Agda";
        version = "2.5.3";
        sha256 = "0r80vw7vnvbgq47y50v050malv7zvv2p2kg6f47i04r0b2ix855a";
-       revision = "3";
-       editedCabalFile = "1hd1viy4wj7fyskjmmf5hqziyvk5qxjr0zcnbp5zdyacng0yyafi";
+       revision = "5";
+       editedCabalFile = "0cly9p549phqv86dlqacxrs2w50y5jmsw21657gpn84ryz3cmjbs";
        isLibrary = true;
        isExecutable = true;
        enableSeparateDataOutput = true;
@@ -976,12 +974,11 @@ self: {
      }) {};
 
   "AppleScript" = callPackage
-    ({ mkDerivation, base }:
+    ({ mkDerivation }:
      mkDerivation {
        pname = "AppleScript";
        version = "0.2.0.1";
        sha256 = "1jmwixyv5msb3lmza7dljvm3l0x5mx8r93zr607sx9m5x9yhlsvr";
-       libraryHaskellDepends = [ base ];
        doHaddock = false;
        homepage = "https://github.com/reinerp/haskell-AppleScript";
        description = "Call AppleScript from Haskell, and then call back into Haskell";
@@ -1849,8 +1846,8 @@ self: {
      }:
      mkDerivation {
        pname = "BlogLiterately-diagrams";
-       version = "0.2.0.5";
-       sha256 = "0j0rs26c6w895k2vhamziqjh8pzc2zjrqd8s6giw7pdxyp7lv94s";
+       version = "0.2.0.6";
+       sha256 = "1ps9k7x0s7w0pbf8v7fphm1nyfh5dbxjm3zc1bfjxry4ciqljfyq";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -1869,8 +1866,8 @@ self: {
      }:
      mkDerivation {
        pname = "Blogdown";
-       version = "0.2.3";
-       sha256 = "0xdlcx82nfm74n88fghbg5f6fnjvrajpsz52hrc4bl5afxx63bpx";
+       version = "0.2.4";
+       sha256 = "04ll74z2yqb99jydz9bw4p602hvpmk03sgix8rzwg0qb38lwvjvm";
        isLibrary = true;
        isExecutable = true;
        enableSeparateDataOutput = true;
@@ -2249,13 +2246,14 @@ self: {
     ({ mkDerivation, array, base, containers, mtl, parsec, readline }:
      mkDerivation {
        pname = "CPL";
-       version = "0.0.8";
-       sha256 = "0f4lkqrqbvsx7hhjprfirqkianw10978d83xy2hbhl421pv69lr0";
+       version = "0.0.9";
+       sha256 = "0pa0iqaflj8h0w3wcwrc27vmg4k7n0x8ck5sjscxvxdbbrwjg6z1";
        isLibrary = false;
        isExecutable = true;
        executableHaskellDepends = [
          array base containers mtl parsec readline
        ];
+       homepage = "https://github.com/msakai/cpl";
        description = "An interpreter of Hagino's Categorical Programming Language (CPL)";
        license = stdenv.lib.licenses.bsd3;
      }) {};
@@ -2496,7 +2494,7 @@ self: {
   "Cabal_2_0_1_1" = callPackage
     ({ mkDerivation, array, base, binary, bytestring, containers
      , deepseq, directory, filepath, pretty, process, QuickCheck, tagged
-     , tar, tasty, tasty-hunit, tasty-quickcheck, time, unix
+     , tasty, tasty-hunit, tasty-quickcheck, time, unix
      }:
      mkDerivation {
        pname = "Cabal";
@@ -2507,8 +2505,8 @@ self: {
          pretty process time unix
        ];
        testHaskellDepends = [
-         array base bytestring containers directory filepath pretty
-         QuickCheck tagged tar tasty tasty-hunit tasty-quickcheck
+         array base containers directory filepath pretty QuickCheck tagged
+         tasty tasty-hunit tasty-quickcheck
        ];
        doCheck = false;
        homepage = "http://www.haskell.org/cabal/";
@@ -2651,8 +2649,8 @@ self: {
        pname = "Cassava";
        version = "0.5.1.0";
        sha256 = "1z9y8vzsb0qxfx72w0nb77n0ibha48dv4sg3wv02xrrbz95nwlrh";
-       revision = "1";
-       editedCabalFile = "1ijb77wqccqgjq0g04m3rk3iygm6hwbmrc50svah19vpl3mkz102";
+       revision = "3";
+       editedCabalFile = "15wwzmp1000jrg3kpyk2zh3k8ja21pdrqj2ghrwwish6lzpsk3v0";
        libraryHaskellDepends = [
          array attoparsec base bytestring bytestring-builder containers
          deepseq hashable Only scientific text unordered-containers vector
@@ -2662,7 +2660,7 @@ self: {
          quickcheck-instances scientific test-framework test-framework-hunit
          test-framework-quickcheck2 text unordered-containers vector
        ];
-       homepage = "https://github.com/hvr/cassava";
+       homepage = "https://github.com/tfausak/cassava";
        description = "A CSV parsing and encoding library";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -2722,6 +2720,24 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "Chart_1_8_3" = callPackage
+    ({ mkDerivation, array, base, colour, data-default-class, lens, mtl
+     , old-locale, operational, time, vector
+     }:
+     mkDerivation {
+       pname = "Chart";
+       version = "1.8.3";
+       sha256 = "13s64fhb2pmkdmx5bkgbgcn25qjihs364fvr47a1dw25f804kiy1";
+       libraryHaskellDepends = [
+         array base colour data-default-class lens mtl old-locale
+         operational time vector
+       ];
+       homepage = "https://github.com/timbod7/haskell-chart/wiki";
+       description = "A library for generating 2D Charts and Plots";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "Chart-cairo" = callPackage
     ({ mkDerivation, array, base, cairo, Chart, colour
      , data-default-class, lens, mtl, old-locale, operational, time
@@ -2739,6 +2755,24 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "Chart-cairo_1_8_3" = callPackage
+    ({ mkDerivation, array, base, cairo, Chart, colour
+     , data-default-class, lens, mtl, old-locale, operational, time
+     }:
+     mkDerivation {
+       pname = "Chart-cairo";
+       version = "1.8.3";
+       sha256 = "1581k1nkvv28a078mc32fwxh98daxqsn3424k1frbrgsppwvlm94";
+       libraryHaskellDepends = [
+         array base cairo Chart colour data-default-class lens mtl
+         old-locale operational time
+       ];
+       homepage = "https://github.com/timbod7/haskell-chart/wiki";
+       description = "Cairo backend for Charts";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "Chart-diagrams" = callPackage
     ({ mkDerivation, base, blaze-markup, bytestring, Chart, colour
      , containers, data-default-class, diagrams-core, diagrams-lib
@@ -2761,14 +2795,37 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "Chart-diagrams_1_8_3" = callPackage
+    ({ mkDerivation, base, blaze-markup, bytestring, Chart, colour
+     , containers, data-default-class, diagrams-core, diagrams-lib
+     , diagrams-postscript, diagrams-svg, lens, mtl, old-locale
+     , operational, svg-builder, SVGFonts, text, time
+     }:
+     mkDerivation {
+       pname = "Chart-diagrams";
+       version = "1.8.3";
+       sha256 = "1p1spkx1xkwfiqjkji9wxca1ar0h6n6vqn6h45ly4szr9qyixvdy";
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         base blaze-markup bytestring Chart colour containers
+         data-default-class diagrams-core diagrams-lib diagrams-postscript
+         diagrams-svg lens mtl old-locale operational svg-builder SVGFonts
+         text time
+       ];
+       homepage = "https://github.com/timbod7/haskell-chart/wiki";
+       description = "Diagrams backend for Charts";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "Chart-gtk" = callPackage
     ({ mkDerivation, array, base, cairo, Chart, Chart-cairo, colour
      , data-default-class, gtk, mtl, old-locale, time
      }:
      mkDerivation {
        pname = "Chart-gtk";
-       version = "1.8.2";
-       sha256 = "1jbl482fd1a4hx56za6xyxi15fz1jg2rdq977spq62aylccpij90";
+       version = "1.8.3";
+       sha256 = "051w4ik5174502z6d4va84hv7a57y31iy94w09gl5qwihzfs7wz4";
        libraryHaskellDepends = [
          array base cairo Chart Chart-cairo colour data-default-class gtk
          mtl old-locale time
@@ -3533,36 +3590,6 @@ self: {
      }:
      mkDerivation {
        pname = "DAV";
-       version = "1.3.1";
-       sha256 = "02f03grgwsazvlkyn743k6hjck9s7brbcgbzvyxv9gwbiyjzm02w";
-       isLibrary = true;
-       isExecutable = true;
-       libraryHaskellDepends = [
-         base bytestring case-insensitive containers data-default exceptions
-         http-client http-client-tls http-types lens mtl transformers
-         transformers-base transformers-compat utf8-string xml-conduit
-         xml-hamlet
-       ];
-       executableHaskellDepends = [
-         base bytestring case-insensitive containers data-default exceptions
-         haskeline http-client http-client-tls http-types lens mtl network
-         network-uri optparse-applicative transformers transformers-base
-         transformers-compat utf8-string xml-conduit xml-hamlet
-       ];
-       homepage = "http://floss.scru.org/hDAV";
-       description = "RFC 4918 WebDAV support";
-       license = stdenv.lib.licenses.gpl3;
-     }) {};
-
-  "DAV_1_3_2" = callPackage
-    ({ mkDerivation, base, bytestring, case-insensitive, containers
-     , data-default, exceptions, haskeline, http-client, http-client-tls
-     , http-types, lens, mtl, network, network-uri, optparse-applicative
-     , transformers, transformers-base, transformers-compat, utf8-string
-     , xml-conduit, xml-hamlet
-     }:
-     mkDerivation {
-       pname = "DAV";
        version = "1.3.2";
        sha256 = "0sai0b7bxwif5czmmdik5dx318drx18inid87wfrxckrflsi8cv1";
        isLibrary = true;
@@ -3582,7 +3609,6 @@ self: {
        homepage = "http://floss.scru.org/hDAV";
        description = "RFC 4918 WebDAV support";
        license = stdenv.lib.licenses.gpl3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "DBlimited" = callPackage
@@ -3626,21 +3652,14 @@ self: {
      }) {};
 
   "DMuCheck" = callPackage
-    ({ mkDerivation, base, binary, directory, distributed-process
-     , distributed-process-simplelocalnet, hint, MuCheck
-     , network-transport-tcp, unix
-     }:
+    ({ mkDerivation, base, MuCheck }:
      mkDerivation {
        pname = "DMuCheck";
        version = "0.3.0.2";
        sha256 = "00dhky0hnda85lvrs155jgwxnpqfm36cqakj3wp0yrn2xlz383ad";
        isLibrary = false;
        isExecutable = true;
-       executableHaskellDepends = [
-         base binary directory distributed-process
-         distributed-process-simplelocalnet hint MuCheck
-         network-transport-tcp unix
-       ];
+       executableHaskellDepends = [ base MuCheck ];
        homepage = "https://bitbucket.com/osu-testing/d-mucheck";
        description = "Distributed Mutation Analysis framework for MuCheck";
        license = stdenv.lib.licenses.gpl2;
@@ -3719,7 +3738,7 @@ self: {
          regex-posix split syb time unix
        ];
        libraryToolDepends = [ alex happy ];
-       executableHaskellDepends = [ array base bytestring HTF ];
+       executableHaskellDepends = [ base ];
        description = "Darcs Patch Manager";
        license = "GPL";
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -4702,7 +4721,6 @@ self: {
   "Earley" = callPackage
     ({ mkDerivation, base, criterion, deepseq, ListLike, parsec
      , QuickCheck, tasty, tasty-hunit, tasty-quickcheck
-     , unordered-containers
      }:
      mkDerivation {
        pname = "Earley";
@@ -4711,7 +4729,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base ListLike ];
-       executableHaskellDepends = [ base unordered-containers ];
        testHaskellDepends = [
          base QuickCheck tasty tasty-hunit tasty-quickcheck
        ];
@@ -6161,8 +6178,8 @@ self: {
      }) {inherit (pkgs) freeglut; inherit (pkgs) mesa;};
 
   "GLUT" = callPackage
-    ({ mkDerivation, array, base, bytestring, containers, OpenGL
-     , OpenGLRaw, random, StateVar, transformers
+    ({ mkDerivation, array, base, containers, OpenGL, StateVar
+     , transformers
      }:
      mkDerivation {
        pname = "GLUT";
@@ -6173,9 +6190,6 @@ self: {
        libraryHaskellDepends = [
          array base containers OpenGL StateVar transformers
        ];
-       executableHaskellDepends = [
-         array base bytestring OpenGLRaw random
-       ];
        homepage = "http://www.haskell.org/haskellwiki/Opengl";
        description = "A binding for the OpenGL Utility Toolkit";
        license = stdenv.lib.licenses.bsd3;
@@ -7358,7 +7372,6 @@ self: {
          utf8-string
        ];
        librarySystemDepends = [ postgresql ];
-       executableSystemDepends = [ postgresql ];
        homepage = "http://github.com/hdbc/hdbc-postgresql";
        description = "PostgreSQL driver for HDBC";
        license = stdenv.lib.licenses.bsd3;
@@ -7400,7 +7413,6 @@ self: {
        isExecutable = true;
        libraryHaskellDepends = [ base bytestring HDBC mtl utf8-string ];
        librarySystemDepends = [ sqlite ];
-       executableSystemDepends = [ sqlite ];
        homepage = "https://github.com/hdbc/hdbc-sqlite3";
        description = "Sqlite v3 driver for HDBC";
        license = stdenv.lib.licenses.bsd3;
@@ -7525,8 +7537,8 @@ self: {
      }:
      mkDerivation {
        pname = "HGamer3D";
-       version = "0.9.0";
-       sha256 = "09psrdhlrxhj8459xjr3j8fwv1mxjrlsn9nkfx0srz5sf0s4sj69";
+       version = "0.9.5";
+       sha256 = "094jq36n6j8k6gxyqm6gpkn1qxadj93m3bn3nrkg3n0nkqpcjcsb";
        libraryHaskellDepends = [
          base binary-serialise-cbor bytestring cereal clock containers
          directory filepath fresco-binding text vect
@@ -8057,21 +8069,22 @@ self: {
 
   "HList" = callPackage
     ({ mkDerivation, array, base, base-orphans, cmdargs, directory
-     , doctest, filepath, ghc-prim, hspec, lens, mtl, process
-     , profunctors, QuickCheck, syb, tagged, template-haskell
+     , filepath, ghc-prim, hspec, hspec-expectations, lens, mtl, process
+     , profunctors, QuickCheck, semigroups, syb, tagged
+     , template-haskell
      }:
      mkDerivation {
        pname = "HList";
-       version = "0.4.2.0";
-       sha256 = "15bpglqj33n4y68mg8l2g0rllrcisg2f94wsl3n7rpy43md596fd";
+       version = "0.5.0.0";
+       sha256 = "16qf076p66caf3cabajbz0lgqzffqzcg0jr6lb4af18kpnpq4zqb";
        enableSeparateDataOutput = true;
        libraryHaskellDepends = [
-         array base base-orphans ghc-prim mtl profunctors tagged
+         array base base-orphans ghc-prim mtl profunctors semigroups tagged
          template-haskell
        ];
        testHaskellDepends = [
-         array base cmdargs directory doctest filepath hspec lens mtl
-         process QuickCheck syb template-haskell
+         array base cmdargs directory filepath hspec hspec-expectations lens
+         mtl process QuickCheck semigroups syb template-haskell
        ];
        description = "Heterogeneous lists";
        license = stdenv.lib.licenses.mit;
@@ -8981,6 +8994,28 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "HaTeX_3_18_0_0" = callPackage
+    ({ mkDerivation, base, bytestring, containers, hashable, matrix
+     , parsec, QuickCheck, tasty, tasty-quickcheck, text, transformers
+     , wl-pprint-extras
+     }:
+     mkDerivation {
+       pname = "HaTeX";
+       version = "3.18.0.0";
+       sha256 = "13w1kn85yg8hmhk5m0rv95nr6db5k7z4ycy9s32gs2m3f0v338jz";
+       libraryHaskellDepends = [
+         base bytestring containers hashable matrix parsec QuickCheck text
+         transformers wl-pprint-extras
+       ];
+       testHaskellDepends = [
+         base parsec QuickCheck tasty tasty-quickcheck text
+       ];
+       homepage = "https://github.com/Daniel-Diaz/HaTeX/blob/master/README.md";
+       description = "The Haskell LaTeX library";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "HaTeX-meta" = callPackage
     ({ mkDerivation, base, Cabal, containers, directory, filepath, ghc
      , haddock, haskell-src-exts, mtl, parsec
@@ -9141,7 +9176,6 @@ self: {
          base containers HTTP hxt hxt-http mtl network network-uri parsec
          transformers
        ];
-       executableHaskellDepends = [ base hxt ];
        testHaskellDepends = [ base hspec hxt ];
        homepage = "https://github.com/egonSchiele/HandsomeSoup";
        description = "Work with HTML more easily in HXT";
@@ -9180,6 +9214,7 @@ self: {
        homepage = "https://github.com/MarisaKirisame/HappyTree#readme";
        description = "Type Safe and End to End Decision Tree";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "HarmTrace" = callPackage
@@ -9763,6 +9798,7 @@ self: {
        homepage = "https://github.com/MaartenFaddegon/Hoed";
        description = "Lightweight algorithmic debugging";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "Hoed_0_5_0" = callPackage
@@ -10408,6 +10444,36 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "IPv6DB_0_2_5" = callPackage
+    ({ mkDerivation, aeson, attoparsec, base, bytestring, fast-logger
+     , hedis, hspec, http-client, http-types, IPv6Addr, mtl
+     , optparse-applicative, text, unordered-containers, vector, wai
+     , wai-logger, warp
+     }:
+     mkDerivation {
+       pname = "IPv6DB";
+       version = "0.2.5";
+       sha256 = "0n8998fkdp6p1gr5j7kg0xfkh88cxmqiwxzh75q0xmkasphx4yfq";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         aeson attoparsec base bytestring hedis http-types IPv6Addr mtl text
+         unordered-containers vector
+       ];
+       executableHaskellDepends = [
+         aeson base bytestring fast-logger hedis http-types IPv6Addr mtl
+         optparse-applicative text unordered-containers vector wai
+         wai-logger warp
+       ];
+       testHaskellDepends = [
+         aeson base hspec http-client http-types vector
+       ];
+       homepage = "http://ipv6db.cybervisible.com";
+       description = "A RESTful Web Service for IPv6-related data";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "IcoGrid" = callPackage
     ({ mkDerivation, array, base, GlomeVec }:
      mkDerivation {
@@ -10647,10 +10713,6 @@ self: {
          attoparsec base bytestring bytestring-nums bytestring-trie
          containers utf8-string
        ];
-       executableHaskellDepends = [
-         attoparsec base bytestring bytestring-nums bytestring-trie
-         containers utf8-string
-       ];
        homepage = "http://github.com/solidsnack/JSONb/";
        description = "JSON parser that uses byte strings";
        license = stdenv.lib.licenses.bsd3;
@@ -10805,23 +10867,6 @@ self: {
      }:
      mkDerivation {
        pname = "JuicyPixels";
-       version = "3.2.9.3";
-       sha256 = "14s57fgf6kd5n5al2kcvk1aaxbq1ph0r5h8blflrjkx83yl6r8yn";
-       libraryHaskellDepends = [
-         base binary bytestring containers deepseq mtl primitive
-         transformers vector zlib
-       ];
-       homepage = "https://github.com/Twinside/Juicy.Pixels";
-       description = "Picture loading/serialization (in png, jpeg, bitmap, gif, tga, tiff and radiance)";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "JuicyPixels_3_2_9_4" = callPackage
-    ({ mkDerivation, base, binary, bytestring, containers, deepseq, mtl
-     , primitive, transformers, vector, zlib
-     }:
-     mkDerivation {
-       pname = "JuicyPixels";
        version = "3.2.9.4";
        sha256 = "1mlj3zcr3c49mjv0sddsfdzvzv3m0cbv56fbrkarygs5dxyh8dgz";
        libraryHaskellDepends = [
@@ -10831,7 +10876,6 @@ self: {
        homepage = "https://github.com/Twinside/Juicy.Pixels";
        description = "Picture loading/serialization (in png, jpeg, bitmap, gif, tga, tiff and radiance)";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "JuicyPixels-canvas" = callPackage
@@ -10864,6 +10908,22 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "JuicyPixels-extra_0_3_0" = callPackage
+    ({ mkDerivation, base, criterion, hspec, JuicyPixels }:
+     mkDerivation {
+       pname = "JuicyPixels-extra";
+       version = "0.3.0";
+       sha256 = "08hf3dklz3zaczbffq11z1yjk3hqf53rnz3g9n989ndw8ybkm865";
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [ base JuicyPixels ];
+       testHaskellDepends = [ base hspec JuicyPixels ];
+       benchmarkHaskellDepends = [ base criterion JuicyPixels ];
+       homepage = "https://github.com/mrkkrp/JuicyPixels-extra";
+       description = "Efficiently scale, crop, flip images with JuicyPixels";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "JuicyPixels-repa" = callPackage
     ({ mkDerivation, base, bytestring, JuicyPixels, repa, vector }:
      mkDerivation {
@@ -11203,7 +11263,6 @@ self: {
        isExecutable = true;
        libraryHaskellDepends = [ base ];
        librarySystemDepends = [ openldap ];
-       executableHaskellDepends = [ base ];
        testHaskellDepends = [ base HUnit ];
        testSystemDepends = [ openldap ];
        homepage = "https://github.com/ezyang/ldap-haskell";
@@ -11534,19 +11593,20 @@ self: {
      }) {};
 
   "Learning" = callPackage
-    ({ mkDerivation, base, hmatrix, vector }:
+    ({ mkDerivation, base, containers, hmatrix, vector }:
      mkDerivation {
        pname = "Learning";
-       version = "0.0.0";
-       sha256 = "18fh7gbpb4pm3cfsz3sxynippg6khf9cj4ijbk6q0xa107czy9w6";
+       version = "0.0.2";
+       sha256 = "0gp8c2xwpsnwbhvdwnpiv3pzmg2i12fv4h1x1fna9q4smgnpfjpb";
        isLibrary = true;
        isExecutable = true;
-       libraryHaskellDepends = [ base hmatrix vector ];
-       executableHaskellDepends = [ base hmatrix vector ];
-       testHaskellDepends = [ base hmatrix vector ];
+       libraryHaskellDepends = [ base containers hmatrix vector ];
+       executableHaskellDepends = [ base containers hmatrix vector ];
+       testHaskellDepends = [ base containers hmatrix vector ];
        homepage = "https://github.com/masterdezign/Learning#readme";
-       description = "Most frequently used machine learning tools";
+       description = "The most frequently used machine learning tools";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "Level0" = callPackage
@@ -11830,9 +11890,6 @@ self: {
          mtl multiset old-locale operational prefix-units pretty PSQueue
          sequential-index split stm time transformers void yjtools
        ];
-       executableHaskellDepends = [
-         base cereal cmdtheline containers transformers
-       ];
        testHaskellDepends = [
          base bytestring cereal composition containers data-ivar directory
          hslogger hslogger-template HUnit lens MonadCatchIO-transformers
@@ -11863,10 +11920,6 @@ self: {
          MonadCatchIO-transformers stm transformers
        ];
        librarySystemDepends = [ openmpi ];
-       executableHaskellDepends = [
-         base cereal cmdtheline hslogger LogicGrowsOnTrees
-       ];
-       executableSystemDepends = [ openmpi ];
        description = "an adapter for LogicGrowsOnTrees that uses MPI";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -11889,9 +11942,6 @@ self: {
          hslogger-template lens LogicGrowsOnTrees MonadCatchIO-transformers
          mtl network pretty transformers
        ];
-       executableHaskellDepends = [
-         base cereal cmdtheline LogicGrowsOnTrees
-       ];
        testHaskellDepends = [
          base hslogger hslogger-template HUnit LogicGrowsOnTrees network
          random stm test-framework test-framework-hunit transformers
@@ -11918,9 +11968,6 @@ self: {
          hslogger hslogger-template LogicGrowsOnTrees
          MonadCatchIO-transformers process transformers
        ];
-       executableHaskellDepends = [
-         base cereal cmdtheline LogicGrowsOnTrees
-       ];
        testHaskellDepends = [
          base cereal hslogger hslogger-template HUnit LogicGrowsOnTrees
          random test-framework test-framework-hunit transformers
@@ -12166,6 +12213,19 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "Mapping" = callPackage
+    ({ mkDerivation, base }:
+     mkDerivation {
+       pname = "Mapping";
+       version = "0.1.0.1";
+       sha256 = "14gjly5dlz5bdi9niqdg6gzf9hin87xnl9hsqlzdpgbk6hzg0az8";
+       libraryHaskellDepends = [ base ];
+       homepage = "https://github.com/zaoqi/Mapping.hs";
+       description = "Mapping";
+       license = stdenv.lib.licenses.agpl3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "MaybeT" = callPackage
     ({ mkDerivation, base, mtl }:
      mkDerivation {
@@ -12278,31 +12338,14 @@ self: {
     ({ mkDerivation, base, newtype-generics }:
      mkDerivation {
        pname = "MemoTrie";
-       version = "0.6.8";
-       sha256 = "194x8a1x8ch5xwpxaagrmpsjca92x1zjiq6dlqdgckyr49blknaz";
-       isLibrary = true;
-       isExecutable = true;
-       libraryHaskellDepends = [ base newtype-generics ];
-       executableHaskellDepends = [ base ];
-       homepage = "https://github.com/conal/MemoTrie";
-       description = "Trie-based memo functions";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "MemoTrie_0_6_9" = callPackage
-    ({ mkDerivation, base, newtype-generics }:
-     mkDerivation {
-       pname = "MemoTrie";
        version = "0.6.9";
        sha256 = "157p0pi6rrq74a35mq6zkkycv4ah7xhkbrcmnkb9xf7pznw4aq0x";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base newtype-generics ];
-       executableHaskellDepends = [ base ];
        homepage = "https://github.com/conal/MemoTrie";
        description = "Trie-based memo functions";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "MetaHDBC" = callPackage
@@ -13073,6 +13116,18 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "Naperian" = callPackage
+    ({ mkDerivation, base, containers, ghc-prim, vector }:
+     mkDerivation {
+       pname = "Naperian";
+       version = "0.1.0.1";
+       sha256 = "0h8kijw9y0p7bpy6qr1334xzbkcici3jrnk16w0cm4mxykrqjhwc";
+       libraryHaskellDepends = [ base containers ghc-prim vector ];
+       homepage = "https://github.com/idontgetoutmuch/Naperian";
+       description = "Naperian Functors for APL-like programming";
+       license = "unknown";
+     }) {};
+
   "NaturalLanguageAlphabets" = callPackage
     ({ mkDerivation, aeson, attoparsec, base, binary, cereal
      , containers, criterion, deepseq, file-embed, hashtables
@@ -13101,7 +13156,7 @@ self: {
      }) {};
 
   "NaturalSort" = callPackage
-    ({ mkDerivation, base, bytestring, QuickCheck, strict }:
+    ({ mkDerivation, base, bytestring, strict }:
      mkDerivation {
        pname = "NaturalSort";
        version = "0.2.1";
@@ -13109,7 +13164,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base bytestring strict ];
-       executableHaskellDepends = [ base bytestring QuickCheck strict ];
        homepage = "http://github.com/joachifm/natsort";
        description = "Natural sorting for strings";
        license = stdenv.lib.licenses.bsd3;
@@ -13813,7 +13867,6 @@ self: {
          base ObjectName OpenGL StateVar transformers
        ];
        librarySystemDepends = [ openal ];
-       executableHaskellDepends = [ base ];
        homepage = "https://github.com/haskell-openal/ALUT";
        description = "A binding to the OpenAL cross-platform 3D audio API";
        license = stdenv.lib.licenses.bsd3;
@@ -14652,23 +14705,24 @@ self: {
 
   "Plot-ho-matic" = callPackage
     ({ mkDerivation, base, bytestring, cairo, cereal, Chart
-     , Chart-cairo, containers, data-default-class, generic-accessors
-     , glib, gtk3, lens, text, time, transformers, vector
+     , Chart-cairo, colour, containers, data-default-class
+     , generic-accessors, glib, gtk3, lens, text, time, transformers
+     , vector
      }:
      mkDerivation {
        pname = "Plot-ho-matic";
-       version = "0.12.2.0";
-       sha256 = "1hy641q1qjjlig5xs2v3l2nj3mc10zrxsipr24x6b2750lhakbr4";
+       version = "0.12.2.1";
+       sha256 = "0wxz9skscs72bxb2fac82pyn1wkcxc666l40s42q32rbq17d9x44";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
-         base bytestring cairo cereal Chart Chart-cairo containers
+         base bytestring cairo cereal Chart Chart-cairo colour containers
          data-default-class generic-accessors glib gtk3 lens text time
          transformers vector
        ];
-       executableHaskellDepends = [ base containers generic-accessors ];
        description = "Real-time line plotter for generic data";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "PlslTools" = callPackage
@@ -16110,8 +16164,8 @@ self: {
      }) {};
 
   "SHA" = callPackage
-    ({ mkDerivation, array, base, binary, bytestring, directory
-     , QuickCheck, test-framework, test-framework-quickcheck2
+    ({ mkDerivation, array, base, binary, bytestring, QuickCheck
+     , test-framework, test-framework-quickcheck2
      }:
      mkDerivation {
        pname = "SHA";
@@ -16120,7 +16174,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ array base binary bytestring ];
-       executableHaskellDepends = [ base bytestring directory ];
        testHaskellDepends = [
          array base binary bytestring QuickCheck test-framework
          test-framework-quickcheck2
@@ -16606,32 +16659,6 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
-  "ShellCheck_0_4_6" = callPackage
-    ({ mkDerivation, base, containers, directory, json, mtl, parsec
-     , process, QuickCheck, regex-tdfa
-     }:
-     mkDerivation {
-       pname = "ShellCheck";
-       version = "0.4.6";
-       sha256 = "1g5ihsma3zgb7q89n2j4772f504nnhfn065xdz6bqgrnjhkrpsqi";
-       isLibrary = true;
-       isExecutable = true;
-       libraryHaskellDepends = [
-         base containers directory json mtl parsec process QuickCheck
-         regex-tdfa
-       ];
-       executableHaskellDepends = [
-         base containers directory json mtl parsec QuickCheck regex-tdfa
-       ];
-       testHaskellDepends = [
-         base containers directory json mtl parsec QuickCheck regex-tdfa
-       ];
-       homepage = "http://www.shellcheck.net/";
-       description = "Shell script analysis tool";
-       license = stdenv.lib.licenses.gpl3;
-       hydraPlatforms = stdenv.lib.platforms.none;
-     }) {};
-
   "ShellCheck" = callPackage
     ({ mkDerivation, base, containers, directory, json, mtl, parsec
      , process, QuickCheck, regex-tdfa
@@ -17723,6 +17750,28 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "TORCS" = callPackage
+    ({ mkDerivation, base, bytestring, containers, directory, lens
+     , monad-loops, monad-parallel, MonadRandom, network, process
+     , random, random-shuffle, time, Yampa
+     }:
+     mkDerivation {
+       pname = "TORCS";
+       version = "0.1.0.2";
+       sha256 = "0lkp8qcglp2l6hq4py3i3kc1p1s6wvydrszh9dwfm6vk41cjwmnw";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         base bytestring containers directory lens monad-loops
+         monad-parallel MonadRandom network process random random-shuffle
+         time Yampa
+       ];
+       executableHaskellDepends = [ base bytestring Yampa ];
+       description = "Bindings to the TORCS vehicle simulator";
+       license = "GPL";
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "TTTAS" = callPackage
     ({ mkDerivation, base }:
      mkDerivation {
@@ -17849,7 +17898,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base mtl old-time time ];
-       executableHaskellDepends = [ base mtl old-time ];
        description = "Database library with left-fold interface, for PostgreSQL, Oracle, SQLite, ODBC";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -19135,24 +19183,16 @@ self: {
          winmm = null;};
 
   "Win32_2_6_2_0" = callPackage
-    ({ mkDerivation, advapi32, base, bytestring, filepath, gdi32, imm32
-     , msimg32, shell32, shfolder, shlwapi, unbuildable, user32, winmm
-     }:
+    ({ mkDerivation }:
      mkDerivation {
        pname = "Win32";
        version = "2.6.2.0";
        sha256 = "0rfp3yivwycp988rp01zgx61m7csrr7v449ksjrym1bb06ksxgjr";
-       libraryHaskellDepends = [ base bytestring filepath unbuildable ];
-       librarySystemDepends = [
-         advapi32 gdi32 imm32 msimg32 shell32 shfolder shlwapi user32 winmm
-       ];
        homepage = "https://github.com/haskell/win32";
        description = "A binding to Windows Win32 API";
        license = stdenv.lib.licenses.bsd3;
        platforms = stdenv.lib.platforms.none;
-     }) {advapi32 = null; gdi32 = null; imm32 = null; msimg32 = null; 
-         shell32 = null; shfolder = null; shlwapi = null; user32 = null; 
-         winmm = null;};
+     }) {};
 
   "Win32-console" = callPackage
     ({ mkDerivation, base, Win32 }:
@@ -19230,7 +19270,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base containers directory Win32 ];
-       executableHaskellDepends = [ base directory ];
        description = "A binding to part of the Win32 library for file notification";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -19600,22 +19639,24 @@ self: {
      }) {};
 
   "XSaiga" = callPackage
-    ({ mkDerivation, base, cgi, containers, hsparql, network, pretty
-     , rdf4h, text
+    ({ mkDerivation, base, bifunctors, bytestring, cgi, containers
+     , hsparql, mtl, network, pretty, rdf4h, text
      }:
      mkDerivation {
        pname = "XSaiga";
-       version = "1.5.0.0";
-       sha256 = "0v4f1z8xhwyiq5y2p8dxdxmdg4y2ik02zmamjff5mb7d22bqwpir";
+       version = "1.6.0.0";
+       sha256 = "1kc48pdqhxiqmmp7fhlidx5lqzr57b34d6sln1hxpvkl862sfmr5";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
-         base containers hsparql network pretty rdf4h text
+         base bifunctors bytestring cgi containers hsparql mtl network
+         pretty rdf4h text
        ];
        executableHaskellDepends = [
-         base cgi containers hsparql network pretty rdf4h text
+         base bifunctors bytestring cgi containers hsparql mtl network
+         pretty rdf4h text
        ];
-       homepage = "http://hafiz.myweb.cs.uwindsor.ca/proHome.html";
+       homepage = "http://speechweb2.cs.uwindsor.ca/solarman4/demo_sparql.html";
        description = "An implementation of a polynomial-time top-down parser suitable for NLP";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -19800,8 +19841,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base deepseq random vector-space ];
-       executableHaskellDepends = [ base ];
-       testHaskellDepends = [ base ];
        homepage = "https://github.com/ony/Yampa-core";
        description = "Library for programming hybrid systems";
        license = stdenv.lib.licenses.bsd3;
@@ -20045,7 +20084,6 @@ self: {
        ];
        librarySystemDepends = [ abc ];
        libraryToolDepends = [ c2hs ];
-       executableHaskellDepends = [ base base-compat ];
        testHaskellDepends = [
          aig base base-compat directory QuickCheck tasty tasty-ant-xml
          tasty-hunit tasty-quickcheck vector
@@ -21445,8 +21483,8 @@ self: {
        pname = "ad";
        version = "4.3.5";
        sha256 = "0q4dvi02k21jq8xf0ywgmcs5mph4hpx5s3y3pj839y0g3x5paplw";
-       revision = "1";
-       editedCabalFile = "10azjkyjx9gxz8pp6aapx2jkniyayns5qqdapb5vi7i7ykx6j92n";
+       revision = "2";
+       editedCabalFile = "0307kxvxzfsp9jlkhj4rcc6rncndq2ih87b8vn9h55fzii868j74";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          array base comonad containers data-reify erf free nats reflection
@@ -21789,39 +21827,6 @@ self: {
      }:
      mkDerivation {
        pname = "aeson";
-       version = "1.2.3.0";
-       sha256 = "1gwwqpbj6j93nlm6rvhdmvs0sq8rn17cwpyw7wdphanwjn9cdkda";
-       libraryHaskellDepends = [
-         attoparsec base base-compat bytestring containers deepseq dlist
-         ghc-prim hashable scientific tagged template-haskell text
-         th-abstraction time time-locale-compat unordered-containers
-         uuid-types vector
-       ];
-       testHaskellDepends = [
-         attoparsec base base-compat base-orphans base16-bytestring
-         bytestring containers directory dlist filepath generic-deriving
-         ghc-prim hashable hashable-time HUnit integer-logarithms QuickCheck
-         quickcheck-instances scientific tagged template-haskell
-         test-framework test-framework-hunit test-framework-quickcheck2 text
-         time time-locale-compat unordered-containers uuid-types vector
-       ];
-       homepage = "https://github.com/bos/aeson";
-       description = "Fast JSON parsing and encoding";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "aeson_1_2_4_0" = callPackage
-    ({ mkDerivation, attoparsec, base, base-compat, base-orphans
-     , base16-bytestring, bytestring, containers, deepseq, directory
-     , dlist, filepath, generic-deriving, ghc-prim, hashable
-     , hashable-time, HUnit, integer-logarithms, QuickCheck
-     , quickcheck-instances, scientific, tagged, template-haskell
-     , test-framework, test-framework-hunit, test-framework-quickcheck2
-     , text, th-abstraction, time, time-locale-compat
-     , unordered-containers, uuid-types, vector
-     }:
-     mkDerivation {
-       pname = "aeson";
        version = "1.2.4.0";
        sha256 = "16zwpd07cmhs58wwsqbhxy3b58gqw8w5nr7nf6lwi4nvznjdn09l";
        libraryHaskellDepends = [
@@ -21841,7 +21846,6 @@ self: {
        homepage = "https://github.com/bos/aeson";
        description = "Fast JSON parsing and encoding";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "aeson-applicative" = callPackage
@@ -22125,8 +22129,8 @@ self: {
     ({ mkDerivation, aeson, base, iproute, text }:
      mkDerivation {
        pname = "aeson-iproute";
-       version = "0.1.1";
-       sha256 = "1bsrq5mvxbqyrs3jyryy0rh88dzkh8zaf0q07arnjznlwz5k7iwz";
+       version = "0.1.2";
+       sha256 = "09l1q44869hl6pknrrkg7ccwfj4w3mhr3k43j9a7sg7961lnqnsz";
        libraryHaskellDepends = [ aeson base iproute text ];
        homepage = "https://github.com/greydot/aeson-iproute";
        description = "Aeson instances for iproute types";
@@ -22203,11 +22207,12 @@ self: {
     ({ mkDerivation, aeson, base, hspec, lens, lens-aeson, text }:
      mkDerivation {
        pname = "aeson-picker";
-       version = "0.1.0.0";
-       sha256 = "1976cf67y0077gd1s13vrfws5w5mcak94dc6ygnl1pir6ysanaf7";
+       version = "0.1.0.2";
+       sha256 = "0m14ykp894s8nbg89v2f83yyb344ypxwchmyww0nq0mcpzk3v95b";
        libraryHaskellDepends = [ aeson base lens lens-aeson text ];
        testHaskellDepends = [ base hspec text ];
        homepage = "https://github.com/ozzzzz/aeson-picker#readme";
+       description = "Tiny library to get fields from JSON format";
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
@@ -22302,8 +22307,8 @@ self: {
      }:
      mkDerivation {
        pname = "aeson-quick";
-       version = "0.1.1.2";
-       sha256 = "0b1pp0hl543pmjkhmcq112xxivd8njnfpgklayllyrxdrbrafrp6";
+       version = "0.1.2.0";
+       sha256 = "18a5gwfyx382dxlhr4gch8yd39kgiamp2fpxsvvgi7bfyc55pq1h";
        libraryHaskellDepends = [
          aeson attoparsec base deepseq text unordered-containers vector
        ];
@@ -22472,6 +22477,7 @@ self: {
        homepage = "https://github.com/codedownio/aeson-typescript#readme";
        description = "Generate TypeScript definition files from your ADTs";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "aeson-utils" = callPackage
@@ -22705,11 +22711,6 @@ self: {
          fclabels mtl network pipes pipes-concurrency pipes-network safe
          snmp time transformers unix
        ];
-       executableHaskellDepends = [
-         base binary bitwise bytestring containers data-default Diff
-         fclabels mtl network pipes pipes-concurrency pipes-network safe
-         snmp time transformers unix
-       ];
        description = "AgentX protocol for write SNMP subagents";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -22885,6 +22886,37 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "airship_0_9_3" = callPackage
+    ({ mkDerivation, attoparsec, base, base64-bytestring, blaze-builder
+     , bytestring, bytestring-trie, case-insensitive, containers
+     , cryptohash, directory, either, filepath, http-date, http-media
+     , http-types, lifted-base, microlens, mime-types, mmorph
+     , monad-control, mtl, network, old-locale, random, tasty
+     , tasty-hunit, tasty-quickcheck, text, time, transformers
+     , transformers-base, unix, unordered-containers, wai, wai-extra
+     }:
+     mkDerivation {
+       pname = "airship";
+       version = "0.9.3";
+       sha256 = "0nildnm2f8n87sy6lrzkfxjypf72vy3d8yknl9qcnzv6kmyq6m72";
+       libraryHaskellDepends = [
+         attoparsec base base64-bytestring blaze-builder bytestring
+         bytestring-trie case-insensitive containers cryptohash directory
+         either filepath http-date http-media http-types lifted-base
+         microlens mime-types mmorph monad-control mtl network old-locale
+         random text time transformers transformers-base unix
+         unordered-containers wai wai-extra
+       ];
+       testHaskellDepends = [
+         base bytestring tasty tasty-hunit tasty-quickcheck text
+         transformers wai
+       ];
+       homepage = "https://github.com/helium/airship/";
+       description = "A Webmachine-inspired HTTP library";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "airtable-api" = callPackage
     ({ mkDerivation, aeson, base, bytestring, hashable, lens, text
      , time, unordered-containers, wreq
@@ -22943,8 +22975,8 @@ self: {
      }:
      mkDerivation {
        pname = "aivika-distributed";
-       version = "1.1.1";
-       sha256 = "0xwbyh1q32xl6xcv8fl49n98b40ma0ycfls21x0l9fjx15wk95ac";
+       version = "1.1.2";
+       sha256 = "15ixv4zzb03wiijx5g7l9csawfihklsh1jnphnwb6j8d1kpmmh5v";
        libraryHaskellDepends = [
          aivika aivika-transformers array base binary containers
          distributed-process exceptions mtl mwc-random random stm time
@@ -23431,7 +23463,6 @@ self: {
        libraryHaskellDepends = [
          algebra base basic-prelude lens semigroups
        ];
-       executableHaskellDepends = [ base ];
        homepage = "https://github.com/konn/algebraic-prelude#readme";
        description = "Algebraically structured Prelude";
        license = stdenv.lib.licenses.bsd3;
@@ -24489,8 +24520,8 @@ self: {
        pname = "amazonka-core";
        version = "1.5.0";
        sha256 = "173mdmk3p9jqnskjf5g9r1kr568plrmshb6p17cq11n1wnngkxnk";
-       revision = "1";
-       editedCabalFile = "0w04b2cpshrv1r8nkw70y0n70wshzmnl0lp1khpj8qzzj1zxl1i2";
+       revision = "2";
+       editedCabalFile = "1y1ian4wimsbng4c3ix8jd3pn3b0xhydzwv87blck4sgl41w83vl";
        libraryHaskellDepends = [
          aeson attoparsec base bifunctors bytestring case-insensitive
          conduit conduit-extra cryptonite deepseq exceptions hashable
@@ -24994,6 +25025,27 @@ self: {
        license = stdenv.lib.licenses.mpl20;
      }) {};
 
+  "amazonka-iam-policy" = callPackage
+    ({ mkDerivation, aeson, aeson-pretty, base, base64-bytestring
+     , bytestring, doctest, hspec, profunctors, scientific, text, time
+     }:
+     mkDerivation {
+       pname = "amazonka-iam-policy";
+       version = "0.0.1";
+       sha256 = "1mjc5ym604n9bi9fl7b0581i5z7vy12ri99lz3imz1k3dhr6xwga";
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         aeson base base64-bytestring bytestring profunctors scientific text
+         time
+       ];
+       testHaskellDepends = [
+         aeson aeson-pretty base bytestring doctest hspec
+       ];
+       homepage = "https://github.com/brendanhay/amazonka-iam-policy";
+       description = "Amazon IAM Policy Document DSL and Combinators";
+       license = stdenv.lib.licenses.mpl20;
+     }) {};
+
   "amazonka-importexport" = callPackage
     ({ mkDerivation, amazonka-core, amazonka-test, base, bytestring
      , tasty, tasty-hunit, text, time, unordered-containers
@@ -25572,14 +25624,13 @@ self: {
 
   "amazonka-s3-streaming" = callPackage
     ({ mkDerivation, amazonka, amazonka-core, amazonka-s3, base
-     , bytestring, conduit, conduit-extra, deepseq, dlist, exceptions
-     , http-client, lens, lifted-async, mmap, mmorph, mtl, resourcet
-     , text
+     , bytestring, conduit, deepseq, dlist, exceptions, http-client
+     , lens, lifted-async, mmap, mmorph, mtl, resourcet
      }:
      mkDerivation {
        pname = "amazonka-s3-streaming";
-       version = "0.2.0.4";
-       sha256 = "1lz9a4ra6mjk19spm4i014n076f9x557ax6dsjdg8kn868hqcj56";
+       version = "0.2.0.5";
+       sha256 = "1j9jp409gjq7gnwx163i7qpk4ih3rff7z2icsfmzakiarwmg2ff2";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -25587,10 +25638,6 @@ self: {
          dlist exceptions http-client lens lifted-async mmap mmorph mtl
          resourcet
        ];
-       executableHaskellDepends = [
-         amazonka amazonka-core amazonka-s3 base bytestring conduit
-         conduit-extra text
-       ];
        homepage = "https://github.com/Axman6/amazonka-s3-streaming#readme";
        description = "Provides conduits to upload data to S3 using the Multipart API";
        license = stdenv.lib.licenses.bsd3;
@@ -26380,8 +26427,8 @@ self: {
      }:
      mkDerivation {
        pname = "animate";
-       version = "0.4.0";
-       sha256 = "1mzjvnr1q8lj380ijhqpnqpbqfz34bcv4frg1phsr478j55x17v4";
+       version = "0.6.0";
+       sha256 = "14fbxn3v4l5z6krqsycpg9ylx91y1xwzwqcxpqy5ihjba2g2r23a";
        libraryHaskellDepends = [
          aeson base bytestring containers text vector
        ];
@@ -26389,6 +26436,7 @@ self: {
        homepage = "https://github.com/jxv/animate#readme";
        description = "Animation for sprites";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "animate-example" = callPackage
@@ -26397,8 +26445,8 @@ self: {
      }:
      mkDerivation {
        pname = "animate-example";
-       version = "0.0.0";
-       sha256 = "14i5jav4p7hwj8d7z611mzhdwqmxsikrs56kn10lxww6m9i4fvf5";
+       version = "0.2.0";
+       sha256 = "07jqlqjdza4jxjc4hic2v0gh1n3jcvz1dnsm54m6y68k1ww68vrz";
        isLibrary = false;
        isExecutable = true;
        executableHaskellDepends = [
@@ -26549,7 +26597,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base colour ];
-       executableHaskellDepends = [ base ];
        homepage = "https://github.com/feuerbach/ansi-terminal";
        description = "Simple ANSI terminal support, with Windows compatibility";
        license = stdenv.lib.licenses.bsd3;
@@ -26564,7 +26611,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base colour ];
-       executableHaskellDepends = [ base ];
        homepage = "https://github.com/feuerbach/ansi-terminal";
        description = "Simple ANSI terminal support, with Windows compatibility";
        license = stdenv.lib.licenses.bsd3;
@@ -26779,7 +26825,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base containers MissingH mtl ];
-       executableHaskellDepends = [ base containers MissingH mtl ];
        homepage = "http://software.complete.org/anydbm";
        description = "Interface for DBM-like database systems";
        license = "GPL";
@@ -28145,8 +28190,8 @@ self: {
        pname = "arithmoi";
        version = "0.6.0.1";
        sha256 = "0dhr55r5vi10d9wqr054fy8rxp7h9z0kfpwvckaly0j90d6gvkqm";
-       revision = "2";
-       editedCabalFile = "1z16qjjz7qy0jribxzxn394f78b71lddv2sg199s2k8r8ndzkp0c";
+       revision = "3";
+       editedCabalFile = "1ah8b17pxa96gdap3sr7872km29lz95bqjwswqzfkirig2njlf9q";
        configureFlags = [ "-f-llvm" ];
        libraryHaskellDepends = [
          array base containers exact-pi ghc-prim integer-gmp
@@ -28225,6 +28270,8 @@ self: {
        pname = "array";
        version = "0.5.2.0";
        sha256 = "12v83s2imxb3p2crnlzrpjh0nk6lpysw9bdk9yahs6f37csa5jaj";
+       revision = "1";
+       editedCabalFile = "195c914pc0vk1ya6lz42kb4gmhkam7s0xi7x0dgzhpb5gkcrs5qx";
        libraryHaskellDepends = [ base ];
        description = "Mutable and immutable arrays";
        license = stdenv.lib.licenses.bsd3;
@@ -28364,9 +28411,9 @@ self: {
      }) {};
 
   "arrowp-qq" = callPackage
-    ({ mkDerivation, arrows, base, containers, data-default
-     , haskell-src-exts, haskell-src-exts-util, haskell-src-meta, NoHoed
-     , template-haskell, transformers, uniplate
+    ({ mkDerivation, base, containers, data-default, haskell-src-exts
+     , haskell-src-exts-util, haskell-src-meta, NoHoed, template-haskell
+     , transformers, uniplate
      }:
      mkDerivation {
        pname = "arrowp-qq";
@@ -28379,7 +28426,6 @@ self: {
          haskell-src-meta NoHoed template-haskell transformers uniplate
        ];
        executableHaskellDepends = [ base haskell-src-exts NoHoed ];
-       testHaskellDepends = [ arrows base template-haskell ];
        homepage = "https://github.com/pepeiborra/arrowp";
        description = "A preprocessor and quasiquoter for translating arrow notation";
        license = "GPL";
@@ -28975,6 +29021,26 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "async_2_2_1" = callPackage
+    ({ mkDerivation, base, hashable, HUnit, stm, test-framework
+     , test-framework-hunit
+     }:
+     mkDerivation {
+       pname = "async";
+       version = "2.2.1";
+       sha256 = "09whscli1q5z7lzyq9rfk0bq1ydplh6pjmc6qv0x668k5818c2wg";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [ base hashable stm ];
+       testHaskellDepends = [
+         base HUnit stm test-framework test-framework-hunit
+       ];
+       homepage = "https://github.com/simonmar/async";
+       description = "Run IO operations asynchronously and wait for their results";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "async-ajax" = callPackage
     ({ mkDerivation, async, base, ghcjs-ajax, text }:
      mkDerivation {
@@ -29148,6 +29214,29 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "async-timer_0_1_4_1" = callPackage
+    ({ mkDerivation, base, containers, criterion, HUnit, lifted-async
+     , lifted-base, monad-control, safe-exceptions, test-framework
+     , test-framework-hunit, transformers-base
+     }:
+     mkDerivation {
+       pname = "async-timer";
+       version = "0.1.4.1";
+       sha256 = "1653hcx4a265drbgp0js9bhg3zfaspqxkx12f4v22vrfg64lvan2";
+       libraryHaskellDepends = [
+         base lifted-async lifted-base monad-control safe-exceptions
+         transformers-base
+       ];
+       testHaskellDepends = [
+         base containers criterion HUnit lifted-async test-framework
+         test-framework-hunit
+       ];
+       homepage = "https://github.com/mtesseract/async-timer#readme";
+       description = "Provides API for timer based execution of IO actions";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "asynchronous-exceptions" = callPackage
     ({ mkDerivation, base }:
      mkDerivation {
@@ -29344,7 +29433,7 @@ self: {
 
   "atom-conduit" = callPackage
     ({ mkDerivation, base, blaze-builder, conduit, conduit-combinators
-     , data-default, hlint, lens-simple, mono-traversable, parsers
+     , data-default, lens-simple, mono-traversable, parsers
      , quickcheck-instances, resourcet, safe-exceptions, tasty
      , tasty-hunit, tasty-quickcheck, text, time, timerep
      , uri-bytestring, xml-conduit, xml-types
@@ -29359,7 +29448,7 @@ self: {
          uri-bytestring xml-conduit xml-types
        ];
        testHaskellDepends = [
-         base blaze-builder conduit conduit-combinators data-default hlint
+         base blaze-builder conduit conduit-combinators data-default
          lens-simple mono-traversable parsers quickcheck-instances resourcet
          safe-exceptions tasty tasty-hunit tasty-quickcheck text time
          uri-bytestring xml-conduit xml-types
@@ -29401,10 +29490,10 @@ self: {
     ({ mkDerivation, base, stm }:
      mkDerivation {
        pname = "atomic-modify";
-       version = "0.1.0.0";
-       sha256 = "138nm3mgrr8yk4dlk4zlrxzrqp250wxl0sj3qbb3n1vyx5mhw02y";
+       version = "0.1.0.1";
+       sha256 = "0kkfbm7jkarzj42ja7093i1j1h4klg362pfz1cvldvdhzjgs009r";
        libraryHaskellDepends = [ base stm ];
-       homepage = "https://github.com/chris-martin/haskell-libraries";
+       homepage = "https://github.com/chris-martin/atomic-modify";
        description = "A typeclass for mutable references that have an atomic modify operation";
        license = stdenv.lib.licenses.asl20;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -29533,71 +29622,88 @@ self: {
      }) {};
 
   "ats-format" = callPackage
-    ({ mkDerivation, alex, ansi-wl-pprint, base, Cabal, cli-setup
-     , directory, file-embed, happy, htoml-megaparsec, language-ats
-     , optparse-applicative, process, text, unordered-containers
+    ({ mkDerivation, ansi-wl-pprint, base, Cabal, cli-setup, directory
+     , file-embed, htoml-megaparsec, language-ats, optparse-applicative
+     , process, text, unordered-containers
      }:
      mkDerivation {
        pname = "ats-format";
-       version = "0.2.0.9";
-       sha256 = "07vbqwdlhnbqman07yh53s3fsdvpvphbj6s5cr9cr7pb6l3s3m13";
-       isLibrary = true;
+       version = "0.2.0.17";
+       sha256 = "13bxd28pyxyna8vv3vg8d29wmyi6iv296jqbcjh0p12jicxgf4i8";
+       isLibrary = false;
        isExecutable = true;
        enableSeparateDataOutput = true;
        setupHaskellDepends = [ base Cabal cli-setup ];
-       libraryHaskellDepends = [
+       executableHaskellDepends = [
          ansi-wl-pprint base directory file-embed htoml-megaparsec
          language-ats optparse-applicative process text unordered-containers
        ];
-       libraryToolDepends = [ alex happy ];
-       executableHaskellDepends = [ base ];
        description = "A source-code formatter for ATS";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "ats-pkg" = callPackage
-    ({ mkDerivation, ansi-wl-pprint, base, binary, bytestring, Cabal
-     , cli-setup, composition-prelude, dhall, directory, filemanip
-     , http-client, http-client-tls, lens, optparse-applicative
+    ({ mkDerivation, ansi-wl-pprint, ats-setup, base, binary
+     , bytestring, bzlib, Cabal, cli-setup, composition-prelude
+     , containers, cpphs, dependency, dhall, directory, file-embed
+     , http-client, http-client-tls, lens, lzma, optparse-applicative
      , parallel-io, process, shake, shake-ats, shake-ext, tar, temporary
-     , text, unix, zlib
+     , text, unix, zip-archive, zlib
      }:
      mkDerivation {
        pname = "ats-pkg";
-       version = "2.1.0.8";
-       sha256 = "05ipwj3ihds2q8amvxxj02jzqpbmyjvd55a69z7bmx9vmz8j3pal";
+       version = "2.4.2.19";
+       sha256 = "0l8lrr4b99csr5wd4r9lxcax8b9jh8ij80hxsmwzs777fl295yjf";
        isLibrary = true;
        isExecutable = true;
        setupHaskellDepends = [ base Cabal cli-setup ];
        libraryHaskellDepends = [
-         ansi-wl-pprint base binary bytestring composition-prelude dhall
-         directory filemanip http-client http-client-tls lens
+         ansi-wl-pprint ats-setup base binary bytestring bzlib
+         composition-prelude containers dependency dhall directory
+         file-embed http-client http-client-tls lens lzma
          optparse-applicative parallel-io process shake shake-ats shake-ext
-         tar temporary text unix zlib
+         tar temporary text unix zip-archive zlib
        ];
+       libraryToolDepends = [ cpphs ];
        executableHaskellDepends = [ base ];
        homepage = "https://github.com/vmchale/atspkg#readme";
-       description = "Package manager for ATS";
+       description = "A build tool for ATS";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "ats-setup" = callPackage
-    ({ mkDerivation, base, Cabal, directory, http-client
-     , http-client-tls, parallel-io, tar, zlib
+    ({ mkDerivation, base, bytestring, Cabal, dependency, directory
+     , filemanip, http-client, http-client-tls, parallel-io, process
+     , tar, unix, zlib
      }:
      mkDerivation {
        pname = "ats-setup";
-       version = "0.2.0.0";
-       sha256 = "1jkavd5dvsk6nbkik9xcdnlp3ry6jcmvkdk0lhm94f53cwz23xi5";
+       version = "0.3.0.2";
+       sha256 = "1fxk1602kh4i2dgfdjalnwfp37w8r775vd21431pkwf5xcf9ax0g";
        libraryHaskellDepends = [
-         base Cabal directory http-client http-client-tls parallel-io tar
-         zlib
+         base bytestring Cabal dependency directory filemanip http-client
+         http-client-tls parallel-io process tar unix zlib
        ];
        description = "ATS scripts for Cabal builds";
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "ats-storable" = callPackage
+    ({ mkDerivation, base, bytestring, composition-prelude, text }:
+     mkDerivation {
+       pname = "ats-storable";
+       version = "0.2.1.0";
+       sha256 = "1d374jkiifyn6hqr584waqhk4kirqibycs0fszf1v21dkk14jyvx";
+       libraryHaskellDepends = [
+         base bytestring composition-prelude text
+       ];
+       homepage = "https://github.com//ats-generic#readme";
+       description = "Marshal ATS types into Haskell";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "attempt" = callPackage
     ({ mkDerivation, base, failure }:
      mkDerivation {
@@ -30564,14 +30670,14 @@ self: {
   "avro" = callPackage
     ({ mkDerivation, aeson, array, base, base16-bytestring, binary
      , bytestring, containers, data-binary-ieee754, entropy, extra, fail
-     , hashable, hspec, mtl, pure-zlib, QuickCheck, scientific
-     , semigroups, tagged, template-haskell, text, unordered-containers
-     , vector
+     , hashable, hspec, lens, lens-aeson, mtl, pure-zlib, QuickCheck
+     , scientific, semigroups, tagged, template-haskell, text
+     , transformers, unordered-containers, vector
      }:
      mkDerivation {
        pname = "avro";
-       version = "0.2.0.0";
-       sha256 = "1bs2fpka2pz58hj1x8pv27vm2sdap7rp83fasali228iigvlp9cc";
+       version = "0.2.1.0";
+       sha256 = "07gqi33aadb9c94b19z1166ayyi0s95ykda77l53vc2al43sa3bl";
        libraryHaskellDepends = [
          aeson array base base16-bytestring binary bytestring containers
          data-binary-ieee754 entropy fail hashable mtl pure-zlib scientific
@@ -30579,9 +30685,9 @@ self: {
        ];
        testHaskellDepends = [
          aeson array base base16-bytestring binary bytestring containers
-         entropy extra fail hashable hspec mtl pure-zlib QuickCheck
-         scientific semigroups tagged template-haskell text
-         unordered-containers vector
+         entropy extra fail hashable hspec lens lens-aeson mtl pure-zlib
+         QuickCheck scientific semigroups tagged template-haskell text
+         transformers unordered-containers vector
        ];
        homepage = "https://github.com/haskell-works/hw-haskell-avro.git";
        description = "Avro serialization support for Haskell";
@@ -30701,6 +30807,44 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "aws_0_19" = callPackage
+    ({ mkDerivation, aeson, attoparsec, base, base16-bytestring
+     , base64-bytestring, blaze-builder, byteable, bytestring
+     , case-insensitive, cereal, conduit, conduit-combinators
+     , conduit-extra, containers, cryptonite, data-default, directory
+     , errors, filepath, http-client, http-client-tls, http-conduit
+     , http-types, lifted-base, memory, monad-control, mtl, network
+     , old-locale, QuickCheck, quickcheck-instances, resourcet, safe
+     , scientific, tagged, tasty, tasty-hunit, tasty-quickcheck, text
+     , time, transformers, transformers-base, unordered-containers
+     , utf8-string, vector, xml-conduit
+     }:
+     mkDerivation {
+       pname = "aws";
+       version = "0.19";
+       sha256 = "0ykpnm2kyhjf1rf5ldhv0c7zy3zq7jgqmb6xwywk8b2s80ai4fxl";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         aeson attoparsec base base16-bytestring base64-bytestring
+         blaze-builder byteable bytestring case-insensitive cereal conduit
+         conduit-extra containers cryptonite data-default directory filepath
+         http-conduit http-types lifted-base memory monad-control mtl
+         network old-locale resourcet safe scientific tagged text time
+         transformers unordered-containers utf8-string vector xml-conduit
+       ];
+       testHaskellDepends = [
+         aeson base bytestring conduit-combinators errors http-client
+         http-client-tls http-types lifted-base monad-control mtl QuickCheck
+         quickcheck-instances resourcet tagged tasty tasty-hunit
+         tasty-quickcheck text time transformers transformers-base
+       ];
+       homepage = "http://github.com/aristidb/aws";
+       description = "Amazon Web Services (AWS) for Haskell";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "aws-cloudfront-signer" = callPackage
     ({ mkDerivation, asn1-encoding, asn1-types, base, base64-bytestring
      , bytestring, crypto-pubkey-types, RSA, time
@@ -31485,6 +31629,29 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "backprop_0_1_3_0" = callPackage
+    ({ mkDerivation, base, bifunctors, criterion, deepseq, directory
+     , hmatrix, lens, microlens, mnist-idx, mwc-random, primitive
+     , reflection, time, transformers, type-combinators, vector
+     }:
+     mkDerivation {
+       pname = "backprop";
+       version = "0.1.3.0";
+       sha256 = "0x1vp48dl0dlq1bwaq0fy9k472rpx571i7klrhnwnqf6nb52mh1w";
+       libraryHaskellDepends = [
+         base deepseq microlens primitive reflection transformers
+         type-combinators vector
+       ];
+       benchmarkHaskellDepends = [
+         base bifunctors criterion deepseq directory hmatrix lens mnist-idx
+         mwc-random time transformers vector
+       ];
+       homepage = "https://github.com/mstksg/backprop#readme";
+       description = "Heterogeneous automatic differentation (backpropagation)";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "backtracking-exceptions" = callPackage
     ({ mkDerivation, base, either, free, kan-extensions, mtl
      , semigroupoids, semigroups, transformers
@@ -31729,8 +31896,8 @@ self: {
      }) {};
 
   "bamse" = callPackage
-    ({ mkDerivation, base, com, directory, filepath, HUnit, old-time
-     , pretty, process, QuickCheck, regex-compat
+    ({ mkDerivation, base, com, directory, filepath, old-time, pretty
+     , process, regex-compat
      }:
      mkDerivation {
        pname = "bamse";
@@ -31741,7 +31908,6 @@ self: {
        libraryHaskellDepends = [
          base com directory filepath old-time pretty process regex-compat
        ];
-       executableHaskellDepends = [ HUnit QuickCheck ];
        description = "A Windows Installer (MSI) generator framework";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -32149,6 +32315,28 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "base64-bytestring-type" = callPackage
+    ({ mkDerivation, aeson, base, base-compat, base64-bytestring
+     , binary, bytestring, cereal, deepseq, hashable, QuickCheck, tasty
+     , tasty-quickcheck, text
+     }:
+     mkDerivation {
+       pname = "base64-bytestring-type";
+       version = "1";
+       sha256 = "0h74c0qhf4n0pamrl29ha5hgf940bay0dhl8rifaw4l03z8rn0bl";
+       libraryHaskellDepends = [
+         aeson base base-compat base64-bytestring binary bytestring cereal
+         deepseq hashable QuickCheck text
+       ];
+       testHaskellDepends = [
+         aeson base binary bytestring cereal tasty tasty-quickcheck
+       ];
+       homepage = "https://github.com/futurice/haskell-base64-bytestring-type#readme";
+       description = "A newtype around ByteString, for base64 encoding";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "base64-conduit" = callPackage
     ({ mkDerivation, base, base64-bytestring, bytestring, conduit
      , hspec, QuickCheck, transformers
@@ -32426,18 +32614,18 @@ self: {
   "battleship-combinatorics" = callPackage
     ({ mkDerivation, base, combinatorial, containers, deepseq
      , directory, filepath, non-empty, pooled-io, prelude-compat
-     , QuickCheck, random, set-cover, storable-record, storablevector
-     , temporary, transformers, utility-ht
+     , QuickCheck, random, semigroups, set-cover, storable-record
+     , storablevector, temporary, transformers, utility-ht
      }:
      mkDerivation {
        pname = "battleship-combinatorics";
-       version = "0.0";
-       sha256 = "19yc53w1n2clml8gv6h48235kgjzxmg98d8bkjm33k6hcfbx6897";
+       version = "0.0.0.1";
+       sha256 = "00zr3798y5h640rdhls4xkaqmj6n90qnxglq7bq8bvxl68a8ibxd";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
          base combinatorial containers deepseq directory filepath non-empty
-         pooled-io prelude-compat QuickCheck random set-cover
+         pooled-io prelude-compat QuickCheck random semigroups set-cover
          storable-record storablevector temporary transformers utility-ht
        ];
        executableHaskellDepends = [ base containers ];
@@ -32548,17 +32736,17 @@ self: {
      , codec-rpm, cond, conduit, conduit-combinators, conduit-extra
      , containers, content-store, cpio-conduit, cryptonite, directory
      , esqueleto, exceptions, filepath, gi-gio, gi-glib, gi-ostree
-     , gitrev, hspec, http-conduit, HUnit, memory, monad-control
-     , monad-logger, monad-loops, mtl, network-uri, ostree, parsec
-     , parsec-numbers, persistent, persistent-sqlite
+     , gitrev, hspec, http-conduit, HUnit, listsafe, memory
+     , monad-control, monad-logger, monad-loops, mtl, network-uri
+     , ostree, parsec, parsec-numbers, persistent, persistent-sqlite
      , persistent-template, process, regex-pcre, resourcet, split, tar
      , tar-conduit, temporary, text, time, unix, unordered-containers
      , xml-conduit
      }:
      mkDerivation {
        pname = "bdcs";
-       version = "0.1.1";
-       sha256 = "1sxksvn852glnq181cj8y2pw2gkfg7afvhxx4rshvkxb7y58v8w9";
+       version = "0.2.0";
+       sha256 = "1a7cnxfvgrwi966kfccd29s45246dspqnd1fn953xfid4zfqy5s1";
        isLibrary = true;
        isExecutable = true;
        enableSeparateDataOutput = true;
@@ -32567,7 +32755,7 @@ self: {
          aeson base bytestring codec-rpm cond conduit conduit-combinators
          conduit-extra containers content-store cpio-conduit cryptonite
          directory esqueleto exceptions filepath gi-gio gi-glib gi-ostree
-         gitrev http-conduit memory monad-control monad-logger mtl
+         gitrev http-conduit listsafe memory monad-control monad-logger mtl
          network-uri parsec parsec-numbers persistent persistent-sqlite
          persistent-template process regex-pcre resourcet split tar
          tar-conduit temporary text time unix unordered-containers
@@ -32582,8 +32770,8 @@ self: {
        testHaskellDepends = [
          aeson base bytestring codec-rpm cond conduit conduit-combinators
          containers directory esqueleto filepath gi-gio gi-glib hspec HUnit
-         monad-logger mtl parsec parsec-numbers persistent persistent-sqlite
-         persistent-template resourcet text time unix
+         listsafe monad-logger mtl parsec parsec-numbers persistent
+         persistent-sqlite persistent-template resourcet text time unix
        ];
        homepage = "https://github.com/weldr/bdcs";
        description = "Tools for managing a content store of software packages";
@@ -33293,13 +33481,13 @@ self: {
 
   "bifunctors" = callPackage
     ({ mkDerivation, base, base-orphans, comonad, containers, hspec
-     , QuickCheck, semigroups, tagged, template-haskell, th-abstraction
-     , transformers, transformers-compat
+     , hspec-discover, QuickCheck, semigroups, tagged, template-haskell
+     , th-abstraction, transformers, transformers-compat
      }:
      mkDerivation {
        pname = "bifunctors";
-       version = "5.5";
-       sha256 = "0a5y85p1dhcvkagpdci6ah5kczc2jpwsj7ywkd9cg0nqcyzq3icj";
+       version = "5.5.2";
+       sha256 = "04fbsysm6zl8kmvqgffmrqa9bxl9dl2gibrd51asqzg737mb4ark";
        libraryHaskellDepends = [
          base base-orphans comonad containers semigroups tagged
          template-haskell th-abstraction transformers transformers-compat
@@ -33308,6 +33496,7 @@ self: {
          base hspec QuickCheck template-haskell transformers
          transformers-compat
        ];
+       testToolDepends = [ hspec-discover ];
        homepage = "http://github.com/ekmett/bifunctors/";
        description = "Bifunctors";
        license = stdenv.lib.licenses.bsd3;
@@ -34012,6 +34201,25 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "binary-tree" = callPackage
+    ({ mkDerivation, base, ChasingBottoms, checkers, criterion, deepseq
+     , doctest, ghc-prim, HUnit, QuickCheck, random, test-framework
+     , test-framework-quickcheck2
+     }:
+     mkDerivation {
+       pname = "binary-tree";
+       version = "0.1.0.0";
+       sha256 = "12bb144il2ra4l0zbd7ydvdjv9rpbldp2dn80mafx96782ybhikr";
+       libraryHaskellDepends = [ base deepseq ghc-prim ];
+       testHaskellDepends = [
+         base ChasingBottoms checkers doctest HUnit QuickCheck
+         test-framework test-framework-quickcheck2
+       ];
+       benchmarkHaskellDepends = [ base criterion random ];
+       homepage = "https://github.com/oisdk/binary-tree#readme";
+       license = stdenv.lib.licenses.mit;
+     }) {};
+
   "binary-typed" = callPackage
     ({ mkDerivation, base, binary, bytestring, criterion, deepseq
      , murmur-hash, tasty, tasty-hunit, tasty-quickcheck
@@ -34954,8 +35162,7 @@ self: {
 
   "bio" = callPackage
     ({ mkDerivation, array, base, binary, bytestring, containers
-     , directory, mtl, old-time, parallel, parsec, process, QuickCheck
-     , random, tagsoup
+     , directory, mtl, parallel, parsec, QuickCheck, random, tagsoup
      }:
      mkDerivation {
        pname = "bio";
@@ -34968,9 +35175,7 @@ self: {
          array base binary bytestring containers directory mtl parallel
          parsec QuickCheck tagsoup
        ];
-       executableHaskellDepends = [
-         base bytestring containers old-time process QuickCheck random
-       ];
+       executableHaskellDepends = [ base bytestring random ];
        homepage = "http://biohaskell.org/Libraries/Bio";
        description = "A bioinformatics library";
        license = "LGPL";
@@ -35290,7 +35495,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base ghc-prim vector ];
-       executableHaskellDepends = [ base vector ];
        testHaskellDepends = [
          base QuickCheck tasty tasty-hunit tasty-quickcheck tasty-smallcheck
          vector
@@ -35618,8 +35822,8 @@ self: {
        pname = "bits";
        version = "0.5.1";
        sha256 = "14ww8zcyis6kfli28bb9i5dmmj7k1j1dlzpwnfrkzd8kp5xmazk5";
-       revision = "2";
-       editedCabalFile = "1c209vyxxafr1pf1zqcydy85w9v5gvfjy64i5i6v9asfld6jppig";
+       revision = "3";
+       editedCabalFile = "1xvrnswmny4j0p1h30hfgf5h4p128zn578bxzr83v6drmd74az9k";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [ base bytes mtl transformers ];
        testHaskellDepends = [ base doctest ];
@@ -36738,35 +36942,6 @@ self: {
      }:
      mkDerivation {
        pname = "bloodhound";
-       version = "0.15.0.1";
-       sha256 = "0g85fp2vppx6p1zbx506jnsfcik8q7nmc98fwrhcckgvkbdpi2v8";
-       libraryHaskellDepends = [
-         aeson base blaze-builder bytestring containers data-default-class
-         exceptions hashable http-client http-types mtl mtl-compat
-         network-uri scientific semigroups text time transformers
-         unordered-containers vector
-       ];
-       testHaskellDepends = [
-         aeson base bytestring containers errors exceptions generics-sop
-         hspec http-client http-types mtl network-uri QuickCheck
-         quickcheck-properties semigroups temporary text time unix-compat
-         unordered-containers vector
-       ];
-       homepage = "https://github.com/bitemyapp/bloodhound";
-       description = "ElasticSearch client library for Haskell";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "bloodhound_0_15_0_2" = callPackage
-    ({ mkDerivation, aeson, base, blaze-builder, bytestring, containers
-     , data-default-class, errors, exceptions, generics-sop, hashable
-     , hspec, http-client, http-types, mtl, mtl-compat, network-uri
-     , QuickCheck, quickcheck-properties, scientific, semigroups
-     , temporary, text, time, transformers, unix-compat
-     , unordered-containers, vector
-     }:
-     mkDerivation {
-       pname = "bloodhound";
        version = "0.15.0.2";
        sha256 = "17xw085k72dmw1q4cbqjs07gvvwwfsijcs9lsb3smxxhri1s229i";
        libraryHaskellDepends = [
@@ -36784,7 +36959,6 @@ self: {
        homepage = "https://github.com/bitemyapp/bloodhound";
        description = "ElasticSearch client library for Haskell";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "bloodhound-amazonka-auth" = callPackage
@@ -37567,7 +37741,7 @@ self: {
      }) {};
 
   "boring-window-switcher" = callPackage
-    ({ mkDerivation, base, gtk, hspec, transformers, X11 }:
+    ({ mkDerivation, base, gtk, transformers, X11 }:
      mkDerivation {
        pname = "boring-window-switcher";
        version = "0.1.0.4";
@@ -37576,7 +37750,6 @@ self: {
        isExecutable = true;
        libraryHaskellDepends = [ base gtk transformers X11 ];
        executableHaskellDepends = [ base ];
-       testHaskellDepends = [ base hspec ];
        homepage = "https://github.com/debug-ito/boring-window-switcher";
        description = "A boring window switcher";
        license = stdenv.lib.licenses.bsd3;
@@ -37631,8 +37804,8 @@ self: {
        pname = "bound";
        version = "2.0.1";
        sha256 = "0xmvkwambzmji1czxipl9cms5l3v98765b9spmb3wn5n6dpj0ji9";
-       revision = "2";
-       editedCabalFile = "1ls2p35png3wjbldvgknkpsg1xsgxzgkb1mmvzjpbbgxhfhk8x68";
+       revision = "3";
+       editedCabalFile = "1ivq22ks8y4c086q6w74bh8jvgvliwzdayqw0h5zycx8wg7vcgiz";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          base bifunctors binary bytes cereal comonad deepseq hashable mmorph
@@ -37933,15 +38106,12 @@ self: {
          microlens microlens-mtl microlens-th stm template-haskell text
          text-zipper transformers vector vty word-wrap
        ];
-       executableHaskellDepends = [
-         base microlens microlens-th text text-zipper vector vty word-wrap
-       ];
        homepage = "https://github.com/jtdaugherty/brick/";
        description = "A declarative terminal user interface library";
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "brick_0_33" = callPackage
+  "brick_0_34" = callPackage
     ({ mkDerivation, base, config-ini, containers, contravariant
      , data-clist, deepseq, dlist, microlens, microlens-mtl
      , microlens-th, stm, template-haskell, text, text-zipper
@@ -37949,8 +38119,8 @@ self: {
      }:
      mkDerivation {
        pname = "brick";
-       version = "0.33";
-       sha256 = "0052hdwvqrprf5911axikxpigbc1iv3h4kq3zhrnvpy038wjbis1";
+       version = "0.34";
+       sha256 = "1n835ma8a73zcb4q0r066d9ql4071qf1d30cpv2xhwqc5p4c2i41";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -37958,9 +38128,6 @@ self: {
          microlens microlens-mtl microlens-th stm template-haskell text
          text-zipper transformers vector vty word-wrap
        ];
-       executableHaskellDepends = [
-         base microlens microlens-th text text-zipper vector vty word-wrap
-       ];
        homepage = "https://github.com/jtdaugherty/brick/";
        description = "A declarative terminal user interface library";
        license = stdenv.lib.licenses.bsd3;
@@ -37978,7 +38145,6 @@ self: {
        libraryHaskellDepends = [
          base brick containers skylighting text vty
        ];
-       executableHaskellDepends = [ base brick skylighting text vty ];
        homepage = "https://github.com/jtdaugherty/brick-skylighting/";
        description = "Show syntax-highlighted text in your Brick UI";
        license = stdenv.lib.licenses.bsd3;
@@ -37986,16 +38152,23 @@ self: {
      }) {};
 
   "bricks" = callPackage
-    ({ mkDerivation, base, containers, doctest, hedgehog, parsec
-     , template-haskell, text
+    ({ mkDerivation, base, bricks-internal, bricks-internal-test
+     , bricks-parsec, bricks-rendering, bricks-syntax, containers
+     , doctest, hedgehog, mtl, parsec, template-haskell, text
+     , transformers
      }:
      mkDerivation {
        pname = "bricks";
-       version = "0.0.0.2";
-       sha256 = "1iyf9dkifl064x74vxnqdlv096qxiyhvqn91jmj090i4r6m4jlhw";
-       libraryHaskellDepends = [ base containers parsec text ];
+       version = "0.0.0.4";
+       sha256 = "018cp48bm3hk20kfq544hm50s6bik37lv1hnsdpkg6ibgz6a9i4v";
+       libraryHaskellDepends = [
+         base bricks-internal bricks-parsec bricks-rendering bricks-syntax
+         containers mtl parsec text transformers
+       ];
        testHaskellDepends = [
-         base containers doctest hedgehog parsec template-haskell text
+         base bricks-internal bricks-internal-test bricks-parsec
+         bricks-rendering bricks-syntax containers doctest hedgehog mtl
+         parsec template-haskell text transformers
        ];
        homepage = "https://github.com/chris-martin/bricks#readme";
        description = "Bricks is a lazy functional language based on Nix";
@@ -38003,6 +38176,107 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "bricks-internal" = callPackage
+    ({ mkDerivation, base, containers, doctest, either-list-functions
+     , text
+     }:
+     mkDerivation {
+       pname = "bricks-internal";
+       version = "0.0.0.4";
+       sha256 = "1c4nav1ak6nz06ps6pwsrd6ci8ly3xqi6yd8clsvrhqi1r4cwz80";
+       libraryHaskellDepends = [
+         base containers either-list-functions text
+       ];
+       testHaskellDepends = [
+         base containers doctest either-list-functions text
+       ];
+       homepage = "https://github.com/chris-martin/bricks#readme";
+       description = "...";
+       license = stdenv.lib.licenses.asl20;
+     }) {};
+
+  "bricks-internal-test" = callPackage
+    ({ mkDerivation, base, bricks-internal, containers, hedgehog
+     , template-haskell, text
+     }:
+     mkDerivation {
+       pname = "bricks-internal-test";
+       version = "0.0.0.4";
+       sha256 = "1kvhvwi7qd1rxqn6zxz0vmzqnq2w5fzm1dld5yy08v6jr3f7ri8a";
+       libraryHaskellDepends = [
+         base bricks-internal containers hedgehog template-haskell text
+       ];
+       homepage = "https://github.com/chris-martin/bricks#readme";
+       description = "...";
+       license = stdenv.lib.licenses.asl20;
+     }) {};
+
+  "bricks-parsec" = callPackage
+    ({ mkDerivation, base, bricks-internal, bricks-internal-test
+     , bricks-rendering, bricks-syntax, containers, doctest, hedgehog
+     , parsec, text
+     }:
+     mkDerivation {
+       pname = "bricks-parsec";
+       version = "0.0.0.4";
+       sha256 = "1rgcrdn4h4pmq9sa7fbzlmv93j6g80mhirnrx6f5iqgmshlg4cq0";
+       libraryHaskellDepends = [
+         base bricks-internal bricks-syntax containers parsec text
+       ];
+       testHaskellDepends = [
+         base bricks-internal bricks-internal-test bricks-rendering
+         bricks-syntax containers doctest hedgehog parsec text
+       ];
+       homepage = "https://github.com/chris-martin/bricks#readme";
+       description = "...";
+       license = stdenv.lib.licenses.asl20;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
+  "bricks-rendering" = callPackage
+    ({ mkDerivation, base, bricks-internal, bricks-internal-test
+     , bricks-syntax, containers, doctest, hedgehog, template-haskell
+     , text
+     }:
+     mkDerivation {
+       pname = "bricks-rendering";
+       version = "0.0.0.4";
+       sha256 = "1ixg8qsima8hp547ms3jid4hcr0l605ha353r0bngwjxc5h3ixj4";
+       libraryHaskellDepends = [
+         base bricks-internal bricks-syntax containers text
+       ];
+       testHaskellDepends = [
+         base bricks-internal bricks-internal-test bricks-syntax containers
+         doctest hedgehog template-haskell text
+       ];
+       homepage = "https://github.com/chris-martin/bricks#readme";
+       description = "...";
+       license = stdenv.lib.licenses.asl20;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
+  "bricks-syntax" = callPackage
+    ({ mkDerivation, base, bricks-internal, containers, doctest
+     , either-list-functions, exceptions, hint, text
+     }:
+     mkDerivation {
+       pname = "bricks-syntax";
+       version = "0.0.0.4";
+       sha256 = "0bg4vx32fh9fn5lvccayr9dfzynpql08x6ffi0xrw1rkpn2hz415";
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         base bricks-internal containers either-list-functions text
+       ];
+       testHaskellDepends = [
+         base bricks-internal containers doctest either-list-functions
+         exceptions hint text
+       ];
+       homepage = "https://github.com/chris-martin/bricks#readme";
+       description = "...";
+       license = stdenv.lib.licenses.asl20;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "brillig" = callPackage
     ({ mkDerivation, base, binary, cmdargs, containers, directory
      , filepath, ListZipper, text
@@ -38065,6 +38339,47 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "brittany_0_9_0_1" = callPackage
+    ({ mkDerivation, aeson, base, butcher, bytestring, cmdargs
+     , containers, czipwith, data-tree-print, deepseq, directory, extra
+     , filepath, ghc, ghc-boot-th, ghc-exactprint, ghc-paths, hspec
+     , monad-memo, mtl, multistate, neat-interpolation, parsec, pretty
+     , safe, semigroups, strict, syb, text, transformers, uniplate
+     , unsafe, yaml
+     }:
+     mkDerivation {
+       pname = "brittany";
+       version = "0.9.0.1";
+       sha256 = "1ndmnakzq6kiyxlxmgrjmzzpknrn4ib5ck5vxxr90qw8rw6yqi88";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         aeson base butcher bytestring cmdargs containers czipwith
+         data-tree-print deepseq directory extra ghc ghc-boot-th
+         ghc-exactprint ghc-paths monad-memo mtl multistate
+         neat-interpolation pretty safe semigroups strict syb text
+         transformers uniplate unsafe yaml
+       ];
+       executableHaskellDepends = [
+         aeson base butcher bytestring cmdargs containers czipwith
+         data-tree-print deepseq directory extra filepath ghc ghc-boot-th
+         ghc-exactprint ghc-paths hspec monad-memo mtl multistate
+         neat-interpolation pretty safe semigroups strict syb text
+         transformers uniplate unsafe yaml
+       ];
+       testHaskellDepends = [
+         aeson base butcher bytestring cmdargs containers czipwith
+         data-tree-print deepseq directory extra filepath ghc ghc-boot-th
+         ghc-exactprint ghc-paths hspec monad-memo mtl multistate
+         neat-interpolation parsec pretty safe semigroups strict syb text
+         transformers uniplate unsafe yaml
+       ];
+       homepage = "https://github.com/lspitzner/brittany/";
+       description = "Haskell source code formatter";
+       license = stdenv.lib.licenses.agpl3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "broadcast-chan" = callPackage
     ({ mkDerivation, base }:
      mkDerivation {
@@ -38312,8 +38627,8 @@ self: {
      }:
      mkDerivation {
        pname = "buchhaltung";
-       version = "0.0.5";
-       sha256 = "0sbmabig0b5z71c8v71p0fb5wagm0a8vb40c829w6q337q23m9iq";
+       version = "0.0.7";
+       sha256 = "1hkiiah2h64gkb9y6bagg5q182rylysdqwqlkn5lvmym4akp8zlb";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -38474,7 +38789,6 @@ self: {
          data-default http-conduit http-types iso8601-time resourcet text
          time transformers unordered-containers vector
        ];
-       executableHaskellDepends = [ base containers text time ];
        homepage = "https://github.com/sethfowler/hsbugzilla";
        description = "A Haskell interface to the Bugzilla native REST API";
        license = stdenv.lib.licenses.bsd3;
@@ -38768,13 +39082,28 @@ self: {
          base bifunctors containers deque either extra free microlens
          microlens-th mtl multistate pretty transformers unsafe void
        ];
-       testHaskellDepends = [
-         base containers deque either extra free microlens microlens-th mtl
-         multistate pretty transformers unsafe
+       homepage = "https://github.com/lspitzner/butcher/";
+       description = "Chops a command or program invocation into digestable pieces";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
+  "butcher_1_3_0_0" = callPackage
+    ({ mkDerivation, base, bifunctors, containers, deque, extra, free
+     , microlens, microlens-th, mtl, multistate, pretty, transformers
+     , unsafe, void
+     }:
+     mkDerivation {
+       pname = "butcher";
+       version = "1.3.0.0";
+       sha256 = "0v85ganhfljxyqy9sfmhbqnfdazikmy8a3mpg1w1y827l4a3nkng";
+       libraryHaskellDepends = [
+         base bifunctors containers deque extra free microlens microlens-th
+         mtl multistate pretty transformers unsafe void
        ];
        homepage = "https://github.com/lspitzner/butcher/";
        description = "Chops a command or program invocation into digestable pieces";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "butterflies" = callPackage
@@ -38827,7 +39156,6 @@ self: {
          ansi-terminal base colour containers exceptions haskeline mtl
          terminfo-hs text transformers
        ];
-       executableHaskellDepends = [ base text ];
        homepage = "http://github.com/pjones/byline";
        description = "Library for creating command-line interfaces (colors, menus, etc.)";
        license = stdenv.lib.licenses.bsd2;
@@ -38907,8 +39235,8 @@ self: {
        pname = "bytes";
        version = "0.15.3";
        sha256 = "0kfdw1c13y3kxc1s9nzyavrv1ccipzrmqlwmigj3gnwjcjvddp6q";
-       revision = "2";
-       editedCabalFile = "07j20bmhysp4dawy8am1j4lhg21s5c2i8ckqby0iykmfgrlsrcv0";
+       revision = "3";
+       editedCabalFile = "13dwn6srx7zgiyayx5yxc14425asph9mylbi21yw30g04ahrbkxv";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          base binary bytestring cereal containers hashable mtl scientific
@@ -38961,6 +39289,8 @@ self: {
        pname = "bytestring-arbitrary";
        version = "0.1.1";
        sha256 = "1zbf0liaf071ify0rdyazxqnxdkrfl236innqipwz3kqx4vqvrxv";
+       revision = "1";
+       editedCabalFile = "165v7l6j6n7zlzlbl4q8lkaknxnhz4a9lazv4vr4kkln4z0l3i73";
        libraryHaskellDepends = [ base bytestring cryptohash QuickCheck ];
        testHaskellDepends = [ base bytestring cryptohash QuickCheck ];
        benchmarkHaskellDepends = [
@@ -39048,6 +39378,20 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "bytestring-encodings" = callPackage
+    ({ mkDerivation, base, bytestring, gauge, ghc-prim, hedgehog, text
+     }:
+     mkDerivation {
+       pname = "bytestring-encodings";
+       version = "0.1.0.0";
+       sha256 = "070n1203shbfkimkrxr5xs5znpljbb61v7npwp9lgfpj4h8gyaq7";
+       libraryHaskellDepends = [ base bytestring ghc-prim ];
+       testHaskellDepends = [ base bytestring hedgehog ];
+       benchmarkHaskellDepends = [ base bytestring gauge text ];
+       description = "checks to see if a given bytestring adheres to a certain encoding";
+       license = stdenv.lib.licenses.mit;
+     }) {};
+
   "bytestring-from" = callPackage
     ({ mkDerivation, attoparsec, base, bytestring, QuickCheck, tasty
      , tasty-quickcheck, text
@@ -39391,6 +39735,8 @@ self: {
        pname = "bzlib-conduit";
        version = "0.2.1.5";
        sha256 = "1bv78qr6fbf6lg1dx06g3r2904fjnpvb87mlqv6np2kpyzjc11an";
+       revision = "1";
+       editedCabalFile = "1pz462dij6rizmbi7dw6qz50f9xgnzzw2z08cjlvbqzn05cpgdv6";
        enableSeparateDataOutput = true;
        libraryHaskellDepends = [
          base bindings-DSL bytestring conduit conduit-extra data-default mtl
@@ -39407,6 +39753,32 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {inherit (pkgs) bzip2;};
 
+  "bzlib-conduit_0_3_0" = callPackage
+    ({ mkDerivation, base, bindings-DSL, bytestring, bzip2, conduit
+     , data-default, hspec, mtl, random, resourcet
+     }:
+     mkDerivation {
+       pname = "bzlib-conduit";
+       version = "0.3.0";
+       sha256 = "11nz2lkrv39rb7ayhnqlpjrxsprnv92ygwwvgmp3i32l9fakwhpw";
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         base bindings-DSL bytestring conduit data-default mtl resourcet
+       ];
+       librarySystemDepends = [ bzip2 ];
+       testHaskellDepends = [
+         base bindings-DSL bytestring conduit data-default hspec mtl random
+         resourcet
+       ];
+       benchmarkHaskellDepends = [
+         base bindings-DSL bytestring conduit data-default mtl resourcet
+       ];
+       homepage = "https://github.com/snoyberg/bzlib-conduit#readme";
+       description = "Streaming compression/decompression via conduits";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {inherit (pkgs) bzip2;};
+
   "c-dsl" = callPackage
     ({ mkDerivation, base, language-c }:
      mkDerivation {
@@ -39437,8 +39809,8 @@ self: {
      }:
      mkDerivation {
        pname = "c-mosquitto";
-       version = "0.1.2.0";
-       sha256 = "1q2g7wv11d8p5ykbh0m7xd8jx4lvm73i503rz5pvsgmgm39fwy98";
+       version = "0.1.4.1";
+       sha256 = "0adb0sjdvdl3i2mqrpcvdqbi9w7bwcwc7y33ibcsyrgx542jf831";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -39742,8 +40114,8 @@ self: {
      }:
      mkDerivation {
        pname = "cabal-debian";
-       version = "4.36.1";
-       sha256 = "1nvf3virir795bq4a00b8mzhhsbkdfzasw31bwb4rh1s6gqm058r";
+       version = "4.36.2";
+       sha256 = "142y8ng64qcykyjp1yz989ksznhippgij3m5qy5rgh77kdncbpb1";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -39756,10 +40128,6 @@ self: {
        executableHaskellDepends = [
          base Cabal debian lens mtl pretty Unixutils
        ];
-       testHaskellDepends = [
-         base Cabal containers debian Diff directory filepath hsemail HUnit
-         lens pretty process text
-       ];
        homepage = "https://github.com/ddssff/cabal-debian";
        description = "Create a Debianization for a Cabal package";
        license = stdenv.lib.licenses.bsd3;
@@ -39823,25 +40191,12 @@ self: {
     ({ mkDerivation, base, Cabal, directory, filepath }:
      mkDerivation {
        pname = "cabal-doctest";
-       version = "1.0.5";
-       sha256 = "0x3m97q3xjmvf601vzkx4a8sl77x1y8jf0lwbq67181s37jp9asm";
-       libraryHaskellDepends = [ base Cabal directory filepath ];
-       homepage = "https://github.com/phadej/cabal-doctest";
-       description = "A Setup.hs helper for doctests running";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "cabal-doctest_1_0_6" = callPackage
-    ({ mkDerivation, base, Cabal, directory, filepath }:
-     mkDerivation {
-       pname = "cabal-doctest";
        version = "1.0.6";
        sha256 = "0bgd4jdmzxq5y465r4sf4jv2ix73yvblnr4c9wyazazafddamjny";
        libraryHaskellDepends = [ base Cabal directory filepath ];
        homepage = "https://github.com/phadej/cabal-doctest";
        description = "A Setup.hs helper for doctests running";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "cabal-file-th" = callPackage
@@ -39911,15 +40266,15 @@ self: {
      }) {};
 
   "cabal-helper" = callPackage
-    ({ mkDerivation, base, bytestring, Cabal, cabal-install, containers
-     , directory, exceptions, filepath, ghc, ghc-paths, ghc-prim, mtl
-     , process, semigroupoids, template-haskell, temporary, transformers
-     , unix, unix-compat, utf8-string
+    ({ mkDerivation, base, bytestring, Cabal, cabal-install, directory
+     , exceptions, filepath, ghc, ghc-paths, ghc-prim, mtl, process
+     , semigroupoids, template-haskell, temporary, transformers, unix
+     , unix-compat, utf8-string
      }:
      mkDerivation {
        pname = "cabal-helper";
-       version = "0.8.0.0";
-       sha256 = "050g5y74ldpv8haj8grqpk2cw72l3gm0hypza72f556dl9j5hz2m";
+       version = "0.8.0.2";
+       sha256 = "0yhsyq2z660qj5vp38lak2cz90r5jy69ifvz6dfipj6miyh2vmm6";
        isLibrary = true;
        isExecutable = true;
        setupHaskellDepends = [ base Cabal directory filepath ];
@@ -39928,9 +40283,9 @@ self: {
          transformers unix unix-compat
        ];
        executableHaskellDepends = [
-         base bytestring Cabal containers directory exceptions filepath
-         ghc-prim mtl process template-haskell temporary transformers unix
-         unix-compat utf8-string
+         base bytestring Cabal directory exceptions filepath ghc-prim mtl
+         process template-haskell temporary transformers unix unix-compat
+         utf8-string
        ];
        executableToolDepends = [ cabal-install ];
        testHaskellDepends = [
@@ -40401,8 +40756,8 @@ self: {
      }:
      mkDerivation {
        pname = "cabal-toolkit";
-       version = "0.0.4";
-       sha256 = "04afwsbbqsw9lj7flbnrfwy3qbv1c9nkwm65ylspy2nzf9v06ljj";
+       version = "0.0.5";
+       sha256 = "1w3c75avp12ig1bmakgjsp10rb8bnnibxi1sbg96y6gx4g3krbcq";
        libraryHaskellDepends = [
          base binary bytestring Cabal containers ghc template-haskell
        ];
@@ -40516,14 +40871,13 @@ self: {
      , containers, deepseq, directory, distribution-nixpkgs, filepath
      , hackage-db, hopenssl, hpack, language-nix, lens, monad-par
      , monad-par-extras, mtl, optparse-applicative, pretty, process
-     , split, text, time, transformers, utf8-string, yaml
+     , split, tasty, tasty-golden, text, time, transformers, utf8-string
+     , yaml
      }:
      mkDerivation {
        pname = "cabal2nix";
-       version = "2.8.1";
-       sha256 = "1ahdqyiw76fixk90bi1b87ym5ii09fskpk0q9f9csbdmjif945x7";
-       revision = "1";
-       editedCabalFile = "0pq2cns1q7hbxd7gpyy643vaz8pcc7l96vlw23y30hpdgcnn23d3";
+       version = "2.8.2";
+       sha256 = "0m3k8prp13n6n74ghy2m05bj2c940nscjnv6h8g45ygxid8jvxc8";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -40537,6 +40891,9 @@ self: {
          distribution-nixpkgs filepath hopenssl language-nix lens monad-par
          monad-par-extras mtl optparse-applicative pretty utf8-string
        ];
+       testHaskellDepends = [
+         base Cabal filepath language-nix lens pretty tasty tasty-golden
+       ];
        homepage = "https://github.com/nixos/cabal2nix#readme";
        description = "Convert Cabal files into Nix build instructions";
        license = stdenv.lib.licenses.bsd3;
@@ -41111,7 +41468,6 @@ self: {
          OpenGL OpenGLRaw random template-haskell text transformers vector
          WAVE
        ];
-       executableHaskellDepends = [ base lens ];
        homepage = "https://github.com/fumieval/call";
        description = "The call game engine";
        license = stdenv.lib.licenses.bsd3;
@@ -41396,8 +41752,8 @@ self: {
      }:
      mkDerivation {
        pname = "capataz";
-       version = "0.1.0.0";
-       sha256 = "1bz9yazxwdasbdbr9hrfpvjaqd4lax8kqinlj4rxyiq1517rsqrk";
+       version = "0.1.0.1";
+       sha256 = "0ldxnm5mib9gg7qhf29psifkcfzfcrbnfzk93hvnb08lfrdc8d1d";
        libraryHaskellDepends = [
          async base bytestring data-default microlens protolude
          safe-exceptions stm teardown text time unordered-containers uuid
@@ -42153,7 +42509,6 @@ self: {
        libraryHaskellDepends = [
          base bytestring cassava template-haskell vector
        ];
-       executableHaskellDepends = [ base cassava template-haskell ];
        homepage = "https://github.com/typeable/cassava-embed#readme";
        description = "CSV-file embedding library";
        license = stdenv.lib.licenses.bsd3;
@@ -42322,8 +42677,8 @@ self: {
     ({ mkDerivation, base, template-haskell }:
      mkDerivation {
        pname = "catamorphism";
-       version = "0.5.1.0";
-       sha256 = "1lhqdr0l3wc59ms1i1xmwp6iy4n4xrd8pi0an0n0jgxw5j2sfbkq";
+       version = "0.6.0.0";
+       sha256 = "0y1p6xayf4n6y41hmcrxg1zc0xm07vgirvipcm5zj7d5bphddn07";
        libraryHaskellDepends = [ base template-haskell ];
        homepage = "https://github.com/frerich/catamorphism";
        description = "A package exposing a helper function for generating catamorphisms";
@@ -42489,6 +42844,27 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "cayley-client_0_4_3" = callPackage
+    ({ mkDerivation, aeson, attoparsec, base, binary, bytestring
+     , exceptions, hspec, http-client, http-conduit, lens, lens-aeson
+     , mtl, text, transformers, unordered-containers, vector
+     }:
+     mkDerivation {
+       pname = "cayley-client";
+       version = "0.4.3";
+       sha256 = "119jihcnrv197a8v6xciav7dlkq6lagwhp3bw2aviyz49bhsq1j6";
+       libraryHaskellDepends = [
+         aeson attoparsec base binary bytestring exceptions http-client
+         http-conduit lens lens-aeson mtl text transformers
+         unordered-containers vector
+       ];
+       testHaskellDepends = [ aeson base hspec unordered-containers ];
+       homepage = "https://github.com/MichelBoucey/cayley-client";
+       description = "A Haskell client for the Cayley graph database";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "cayley-dickson" = callPackage
     ({ mkDerivation, base, random }:
      mkDerivation {
@@ -42831,6 +43207,8 @@ self: {
        pname = "cereal-conduit";
        version = "0.8.0";
        sha256 = "1srr7agvgfw78q5s1npjq5sgynvhjgllpihiv37ylkwqm4c4ap6r";
+       revision = "1";
+       editedCabalFile = "1imyl3g2bni8bc6kajr857xh94fscphksj3286pxfpa8yp9vqqpc";
        libraryHaskellDepends = [
          base bytestring cereal conduit resourcet transformers
        ];
@@ -43239,7 +43617,6 @@ self: {
          array base binary bytestring Codec-Image-DevIL containers
          data-reify directory GLUT OpenGLRaw process time
        ];
-       executableHaskellDepends = [ base ];
        homepage = "http://www.ittc.ku.edu/csdl/fpg/ChalkBoard";
        description = "Combinators for building and processing 2D images";
        license = stdenv.lib.licenses.bsd3;
@@ -43416,6 +43793,39 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "chart-unit_0_6_0_2" = callPackage
+    ({ mkDerivation, base, colour, data-default, diagrams-lib
+     , diagrams-svg, doctest, foldl, formatting, generic-lens
+     , generic-lens-labels, lens, linear, mwc-probability, mwc-random
+     , numhask, numhask-histogram, numhask-range, palette, primitive
+     , protolude, scientific, svg-builder, SVGFonts, tasty, tasty-hspec
+     , text, time
+     }:
+     mkDerivation {
+       pname = "chart-unit";
+       version = "0.6.0.2";
+       sha256 = "1xdnjdhm20nfp6gypz01rj7i0dz9f3ds5sdacynsmvvj3gi2zimr";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         base colour data-default diagrams-lib diagrams-svg foldl formatting
+         generic-lens lens linear numhask numhask-range palette protolude
+         scientific svg-builder SVGFonts text time
+       ];
+       executableHaskellDepends = [
+         base diagrams-lib formatting generic-lens-labels lens
+         mwc-probability mwc-random numhask numhask-histogram numhask-range
+         primitive protolude text time
+       ];
+       testHaskellDepends = [
+         base doctest numhask numhask-range tasty tasty-hspec
+       ];
+       homepage = "https://github.com/tonyday567/chart-unit#readme";
+       description = "Native haskell charts";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "chaselev-deque" = callPackage
     ({ mkDerivation, abstract-deque, abstract-deque-tests, array
      , atomic-primops, base, containers, ghc-prim, HUnit, test-framework
@@ -44793,8 +45203,8 @@ self: {
 
   "clang-pure" = callPackage
     ({ mkDerivation, base, bytestring, clang, containers, contravariant
-     , hashable, inline-c, lens, microlens, microlens-contra, singletons
-     , stm, template-haskell, unordered-containers, vector
+     , inline-c, microlens, microlens-contra, singletons, stm
+     , template-haskell, vector
      }:
      mkDerivation {
        pname = "clang-pure";
@@ -44807,9 +45217,6 @@ self: {
          microlens-contra singletons stm template-haskell vector
        ];
        librarySystemDepends = [ clang ];
-       executableHaskellDepends = [
-         base bytestring hashable lens unordered-containers
-       ];
        description = "Pure C++ code analysis with libclang";
        license = stdenv.lib.licenses.asl20;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -45445,8 +45852,8 @@ self: {
      }:
      mkDerivation {
        pname = "clckwrks-plugin-page";
-       version = "0.4.3.10";
-       sha256 = "0ijwfl4wj0pjv6hfac6fbrvcg3all9p2wx2w1lirjvn5kgwjj5r2";
+       version = "0.4.3.11";
+       sha256 = "1xqlpdg511m5wif9cz01v0fgam1lsvl50sqigxrcjc9n6fivn61x";
        libraryHaskellDepends = [
          acid-state aeson attoparsec base clckwrks containers directory
          filepath happstack-hsp happstack-server hsp hsx2hs ixset mtl
@@ -46504,9 +46911,6 @@ self: {
        libraryHaskellDepends = [
          base filepath process template-haskell transformers
        ];
-       executableHaskellDepends = [
-         base filepath process template-haskell transformers
-       ];
        homepage = "https://github.com/ndmitchell/cmdargs#readme";
        description = "Command line argument processing";
        license = stdenv.lib.licenses.bsd3;
@@ -46876,15 +47280,15 @@ self: {
 
   "codeworld-api" = callPackage
     ({ mkDerivation, base, blank-canvas, cereal, cereal-text
-     , containers, hashable, mtl, random, text, time
+     , containers, hashable, mtl, random, random-shuffle, text, time
      }:
      mkDerivation {
        pname = "codeworld-api";
-       version = "0.2.1.0";
-       sha256 = "0llvmw7p5csjfky4ajmwwkb4k5i2pb1vcpla94y3xydlm8pwpn4i";
+       version = "0.2.2.0";
+       sha256 = "14q4aqmp2q4jf1w1j071lypysj3b6fxd7k8n4hwi81c8g6n67r81";
        libraryHaskellDepends = [
          base blank-canvas cereal cereal-text containers hashable mtl random
-         text time
+         random-shuffle text time
        ];
        description = "Graphics library for CodeWorld";
        license = stdenv.lib.licenses.asl20;
@@ -47646,6 +48050,8 @@ self: {
        pname = "combinatorial";
        version = "0.0";
        sha256 = "0v0djq8kiiam8fd0057skny3dkqn3y138nf5cqbyqp52wzs2lvs6";
+       revision = "1";
+       editedCabalFile = "18aykjlggxkwn3cl46i2vznvag5kkw2kslf69yxvf4sg34bi7yfz";
        libraryHaskellDepends = [
          array base containers transformers utility-ht
        ];
@@ -47663,6 +48069,8 @@ self: {
        pname = "combinatorial";
        version = "0.1";
        sha256 = "1a5l4iixjhvqca8dvwkx3zvlaimp6ggr3fcm7vk7r77rv6n6svh9";
+       revision = "1";
+       editedCabalFile = "1bqcg04w48dqk4n1n36j9ykajrmwqdd4qpcjjjfhzvm83z5ypsh7";
        libraryHaskellDepends = [
          array base containers transformers utility-ht
        ];
@@ -47740,6 +48148,26 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "comfort-graph_0_0_3" = callPackage
+    ({ mkDerivation, base, containers, QuickCheck, semigroups
+     , transformers, utility-ht
+     }:
+     mkDerivation {
+       pname = "comfort-graph";
+       version = "0.0.3";
+       sha256 = "11s3ag5skk07vs4h6xl20hbmlrbxqcwrj54wfpz2fk73347prmmr";
+       libraryHaskellDepends = [
+         base containers QuickCheck semigroups transformers utility-ht
+       ];
+       testHaskellDepends = [
+         base containers QuickCheck transformers utility-ht
+       ];
+       homepage = "http://hub.darcs.net/thielema/comfort-graph";
+       description = "Graph structure with type parameters for nodes and edges";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "comic" = callPackage
     ({ mkDerivation, aeson, base, text }:
      mkDerivation {
@@ -47895,10 +48323,10 @@ self: {
      }:
      mkDerivation {
        pname = "comonad";
-       version = "5.0.2";
-       sha256 = "115pai560rllsmym76bj787kwz5xx19y8bl6262005nddqwzxc0v";
-       revision = "2";
-       editedCabalFile = "1ngks9bym68rw0xdq43n14nay4kxdxv2n7alwfd9wcpismfz009g";
+       version = "5.0.3";
+       sha256 = "1xjdwm0xvkcqrpyivl6v569dj8xgivw103bzahy14la0cd6mix57";
+       revision = "1";
+       editedCabalFile = "1i72zgxjkbldkwz0g2awf44cm9466ahll89j5kl45vszx4iz0anl";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          base containers contravariant distributive semigroups tagged
@@ -48060,12 +48488,15 @@ self: {
      }) {};
 
   "compactable" = callPackage
-    ({ mkDerivation, base, containers, transformers, vector }:
+    ({ mkDerivation, base, bifunctors, containers, transformers, vector
+     }:
      mkDerivation {
        pname = "compactable";
-       version = "0.1.0.4";
-       sha256 = "1xf13k0syj8ssjgf2snddkgljwxpb4gpl0di9hsf1iy1wcx6pgh6";
-       libraryHaskellDepends = [ base containers transformers vector ];
+       version = "0.1.1.1";
+       sha256 = "0dbjwsbn5wgwwzl90wvcqf2c6968j5bkg1nzdll03nxklqnv3m9b";
+       libraryHaskellDepends = [
+         base bifunctors containers transformers vector
+       ];
        description = "A typeclass for structures which can be catMaybed, filtered, and partitioned";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -48480,8 +48911,8 @@ self: {
     ({ mkDerivation, base }:
      mkDerivation {
        pname = "composition-prelude";
-       version = "1.1.0.2";
-       sha256 = "1r6i0b9kphx8pmmlkna50gdsqwsmsc538nxhax3imxydi2lhxsdd";
+       version = "1.2.0.1";
+       sha256 = "1rb7hy5xfmpv8hr4ik49883ph027g9kskfc77yzwrx29q3jmq3gj";
        libraryHaskellDepends = [ base ];
        homepage = "https://github.com/vmchale/composition-prelude#readme";
        description = "Higher-order function combinators";
@@ -48584,18 +49015,17 @@ self: {
 
   "computational-algebra" = callPackage
     ({ mkDerivation, algebra, algebraic-prelude, arithmoi, base
-     , constraint, constraints, containers, control-monad-loop
-     , convertible, criterion, deepseq, dlist, entropy
-     , equational-reasoning, ghc-typelits-knownnat
-     , ghc-typelits-natnormalise, ghc-typelits-presburger, hashable
-     , heaps, hmatrix, hspec, HUnit, hybrid-vectors, integer-logarithms
-     , lazysmallcheck, lens, ListLike, matrix, monad-loops, MonadRandom
-     , mono-traversable, monomorphic, mtl, parallel, primes, process
-     , QuickCheck, quickcheck-instances, random, reflection, semigroups
-     , singletons, sized, smallcheck, tagged, template-haskell
-     , test-framework, test-framework-hunit, text, transformers
-     , type-natural, unamb, unordered-containers, vector
-     , vector-algorithms
+     , constraints, containers, control-monad-loop, convertible
+     , criterion, deepseq, dlist, entropy, equational-reasoning
+     , ghc-typelits-knownnat, ghc-typelits-natnormalise
+     , ghc-typelits-presburger, hashable, heaps, hmatrix, hspec, HUnit
+     , hybrid-vectors, integer-logarithms, lens, ListLike, matrix
+     , monad-loops, MonadRandom, mono-traversable, monomorphic, mtl
+     , parallel, primes, process, QuickCheck, quickcheck-instances
+     , random, reflection, semigroups, singletons, sized, smallcheck
+     , tagged, template-haskell, test-framework, test-framework-hunit
+     , text, transformers, type-natural, unamb, unordered-containers
+     , vector, vector-algorithms
      }:
      mkDerivation {
        pname = "computational-algebra";
@@ -48616,21 +49046,15 @@ self: {
          template-haskell text type-natural unamb unordered-containers
          vector vector-algorithms
        ];
-       executableHaskellDepends = [
-         algebra algebraic-prelude base constraints convertible criterion
-         deepseq equational-reasoning hmatrix lens matrix MonadRandom
-         parallel random reflection semigroups singletons sized type-natural
-         vector
-       ];
        testHaskellDepends = [
          algebra base constraints containers convertible deepseq
-         equational-reasoning hspec HUnit lazysmallcheck lens matrix
-         MonadRandom monomorphic process QuickCheck quickcheck-instances
-         reflection singletons sized smallcheck tagged test-framework
-         test-framework-hunit text transformers type-natural vector
+         equational-reasoning hspec HUnit lens matrix MonadRandom
+         monomorphic process QuickCheck quickcheck-instances reflection
+         singletons sized smallcheck tagged test-framework
+         test-framework-hunit text type-natural vector
        ];
        benchmarkHaskellDepends = [
-         algebra base constraint constraints containers criterion deepseq
+         algebra base constraints containers criterion deepseq
          equational-reasoning hspec HUnit lens matrix MonadRandom
          monomorphic parallel process QuickCheck quickcheck-instances random
          reflection singletons sized smallcheck tagged test-framework
@@ -48702,14 +49126,14 @@ self: {
      }:
      mkDerivation {
        pname = "concise";
-       version = "0.1.0.0";
-       sha256 = "0ga10djxmc5n37cf5iazkwivfxipav0q2gb8mbkbg3wnn1qhqxmm";
+       version = "0.1.0.1";
+       sha256 = "09crgc6gjfidlad6263253xx1di6wfhc9awhira21s0z7rddy9sw";
        libraryHaskellDepends = [ base bytestring lens text ];
        testHaskellDepends = [
          base bytestring lens QuickCheck quickcheck-instances tasty
          tasty-quickcheck text
        ];
-       homepage = "https://github.com/frasertweedal/hs-concise";
+       homepage = "https://github.com/frasertweedale/hs-concise";
        description = "Utilities for Control.Lens.Cons";
        license = stdenv.lib.licenses.bsd3;
      }) {};
@@ -49016,8 +49440,8 @@ self: {
      }:
      mkDerivation {
        pname = "concurrent-machines";
-       version = "0.3.1.1";
-       sha256 = "109c202sqhsx6fr8m0zkwgzsy7pnnaps2nhyykp7cd6rw0ak6i28";
+       version = "0.3.1.2";
+       sha256 = "1qvd452najs0i3a2k2m493zs1jclsiisr1wv318kvkh0k42sb2m6";
        libraryHaskellDepends = [
          async base containers lifted-async machines monad-control
          semigroups time transformers transformers-base
@@ -49037,8 +49461,8 @@ self: {
      }:
      mkDerivation {
        pname = "concurrent-output";
-       version = "1.10.2";
-       sha256 = "02kfg61f7lm8796n4pdi7yvscg8n869vhl9i6rd9rpyb4l9myzd1";
+       version = "1.10.3";
+       sha256 = "0sp5mc7pxw48k0hv17l553bcjr7s5dp9vznm2n6400nyhgmxdha8";
        libraryHaskellDepends = [
          ansi-terminal async base directory exceptions process stm
          terminal-size text transformers unix
@@ -49331,6 +49755,35 @@ self: {
        homepage = "https://github.com/luispedro/conduit-algorithms#readme";
        description = "Conduit-based algorithms";
        license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
+  "conduit-algorithms_0_0_7_2" = callPackage
+    ({ mkDerivation, async, base, bytestring, bzlib-conduit, conduit
+     , conduit-combinators, conduit-extra, containers, deepseq
+     , directory, HUnit, lzma-conduit, mtl, resourcet, stm, stm-conduit
+     , streaming-commons, test-framework, test-framework-hunit
+     , test-framework-th, transformers, vector
+     }:
+     mkDerivation {
+       pname = "conduit-algorithms";
+       version = "0.0.7.2";
+       sha256 = "19lamsddxvj8m47f97wlmk3phzf2rjdaxjbz064wc96r763mnigy";
+       libraryHaskellDepends = [
+         async base bytestring bzlib-conduit conduit conduit-combinators
+         conduit-extra containers deepseq lzma-conduit mtl resourcet stm
+         stm-conduit streaming-commons transformers vector
+       ];
+       testHaskellDepends = [
+         async base bytestring bzlib-conduit conduit conduit-combinators
+         conduit-extra containers deepseq directory HUnit lzma-conduit mtl
+         resourcet stm stm-conduit streaming-commons test-framework
+         test-framework-hunit test-framework-th transformers vector
+       ];
+       homepage = "https://github.com/luispedro/conduit-algorithms#readme";
+       description = "Conduit-based algorithms";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "conduit-audio" = callPackage
@@ -49449,8 +49902,8 @@ self: {
      }:
      mkDerivation {
        pname = "conduit-connection";
-       version = "0.1.0.3";
-       sha256 = "16j3h318i7s3nr9cz6n1v27d7nkmz5s6dp4fbahziy1pgb4bk3kr";
+       version = "0.1.0.4";
+       sha256 = "1z11r3rf6hmz5b00w4xymp6x0s00acyvbyw6n99wd3b9ycbl2y2y";
        libraryHaskellDepends = [
          base bytestring conduit connection resourcet transformers
        ];
@@ -49566,8 +50019,8 @@ self: {
      }:
      mkDerivation {
        pname = "conduit-iconv";
-       version = "0.1.1.2";
-       sha256 = "02s5jyr6mii45q4nar5fzqr4hsf7b6rw9fyc6g1jrqjr76xk6vsw";
+       version = "0.1.1.3";
+       sha256 = "1dmcsdx0nz0b9sans2fr8lmrii2n0fsjh41jhwlrlng4h93k0w8w";
        libraryHaskellDepends = [ base bytestring conduit ];
        testHaskellDepends = [
          base bytestring conduit mtl QuickCheck test-framework
@@ -49610,9 +50063,9 @@ self: {
      }) {};
 
   "conduit-parse" = callPackage
-    ({ mkDerivation, base, conduit, conduit-combinators, dlist, hlint
-     , mtl, parsers, resourcet, safe, safe-exceptions, tasty
-     , tasty-hunit, text, transformers
+    ({ mkDerivation, base, conduit, conduit-combinators, dlist, mtl
+     , parsers, resourcet, safe, safe-exceptions, tasty, tasty-hunit
+     , text, transformers
      }:
      mkDerivation {
        pname = "conduit-parse";
@@ -49623,7 +50076,7 @@ self: {
          safe-exceptions text transformers
        ];
        testHaskellDepends = [
-         base conduit hlint mtl parsers resourcet safe-exceptions tasty
+         base conduit mtl parsers resourcet safe-exceptions tasty
          tasty-hunit
        ];
        homepage = "https://github.com/k0ral/conduit-parse";
@@ -49692,6 +50145,26 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "conduit-zstd" = callPackage
+    ({ mkDerivation, base, bytestring, conduit, conduit-combinators
+     , conduit-extra, directory, HUnit, test-framework
+     , test-framework-hunit, test-framework-th, zstd
+     }:
+     mkDerivation {
+       pname = "conduit-zstd";
+       version = "0.0.1.0";
+       sha256 = "0psy03s9w9gw5s4a2grvfk9xwjd3g63qch7w4i2kvl3cf9yddsa0";
+       libraryHaskellDepends = [ base bytestring conduit zstd ];
+       testHaskellDepends = [
+         base bytestring conduit conduit-combinators conduit-extra directory
+         HUnit test-framework test-framework-hunit test-framework-th zstd
+       ];
+       homepage = "https://github.com/luispedro/conduit-zstd#readme";
+       description = "Conduit-based ZStd Compression";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "conf" = callPackage
     ({ mkDerivation, base, haskell-src, HUnit, test-framework
      , test-framework-hunit, test-framework-th
@@ -49748,9 +50221,8 @@ self: {
      }) {};
 
   "config-ini" = callPackage
-    ({ mkDerivation, base, containers, directory, doctest, hedgehog
-     , ini, megaparsec, microlens, text, transformers
-     , unordered-containers
+    ({ mkDerivation, base, containers, directory, hedgehog, ini
+     , megaparsec, text, transformers, unordered-containers
      }:
      mkDerivation {
        pname = "config-ini";
@@ -49760,8 +50232,7 @@ self: {
          base containers megaparsec text transformers unordered-containers
        ];
        testHaskellDepends = [
-         base containers directory doctest hedgehog ini microlens text
-         unordered-containers
+         base containers directory hedgehog ini text unordered-containers
        ];
        homepage = "https://github.com/aisamanra/config-ini";
        description = "A library for simple INI-based configuration files";
@@ -49869,7 +50340,7 @@ self: {
     ({ mkDerivation, aeson, aeson-pretty, base, bytestring
      , case-insensitive, containers, directory, either, functor-infix
      , hspec, hspec-discover, mtl, pretty-show, QuickCheck, safe
-     , scientific, string-conversions, template-haskell, text
+     , scientific, string-conversions, template-haskell
      , unordered-containers, vector, yaml
      }:
      mkDerivation {
@@ -49883,9 +50354,6 @@ self: {
          functor-infix mtl safe string-conversions template-haskell
          unordered-containers vector yaml
        ];
-       executableHaskellDepends = [
-         base bytestring mtl pretty-show string-conversions text yaml
-       ];
        testHaskellDepends = [
          aeson aeson-pretty base case-insensitive hspec hspec-discover mtl
          pretty-show QuickCheck scientific string-conversions
@@ -50659,10 +51127,8 @@ self: {
      }) {};
 
   "continuum" = callPackage
-    ({ mkDerivation, base, bytestring, cereal, containers, data-default
-     , foldl, hyperleveldb, leveldb-haskell-fork, mtl, nanomsg-haskell
-     , parallel-io, resourcet, stm, suspend, time, timers, transformers
-     , transformers-base
+    ({ mkDerivation, base, bytestring, cereal, containers, mtl
+     , nanomsg-haskell, time
      }:
      mkDerivation {
        pname = "continuum";
@@ -50673,15 +51139,9 @@ self: {
        libraryHaskellDepends = [
          base bytestring cereal containers mtl nanomsg-haskell time
        ];
-       executableHaskellDepends = [
-         base bytestring cereal containers data-default foldl
-         leveldb-haskell-fork mtl nanomsg-haskell parallel-io resourcet stm
-         suspend time timers transformers transformers-base
-       ];
-       executableSystemDepends = [ hyperleveldb ];
        license = stdenv.lib.licenses.mit;
        hydraPlatforms = stdenv.lib.platforms.none;
-     }) {hyperleveldb = null;};
+     }) {};
 
   "continuum-client" = callPackage
     ({ mkDerivation, base, bytestring, cereal, containers, mtl
@@ -51068,8 +51528,8 @@ self: {
      }:
      mkDerivation {
        pname = "convert-annotation";
-       version = "0.5.0.1";
-       sha256 = "198zkisa1j01wi23z168wkw9xk2xm7z45akj2yxjiz82iy6yp8hi";
+       version = "0.5.1.0";
+       sha256 = "1m6b5b7drgxb6cc4qqhi9s5k93rpsny7yf83a9m5q0a585nwmk0q";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -51658,9 +52118,7 @@ self: {
      }) {};
 
   "country-codes" = callPackage
-    ({ mkDerivation, aeson, base, HTF, HUnit, shakespeare, tagsoup
-     , text
-     }:
+    ({ mkDerivation, aeson, base, HTF, HUnit, shakespeare, text }:
      mkDerivation {
        pname = "country-codes";
        version = "0.1.3";
@@ -51668,7 +52126,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ aeson base shakespeare text ];
-       executableHaskellDepends = [ base tagsoup text ];
        testHaskellDepends = [ aeson base HTF HUnit ];
        homepage = "https://github.com/prowdsponsor/country-codes";
        description = "ISO 3166 country codes and i18n names";
@@ -52386,20 +52843,16 @@ self: {
      }) {};
 
   "crdt" = callPackage
-    ({ mkDerivation, base, binary, bytestring, containers, mtl
-     , network-info, QuickCheck, quickcheck-instances, safe, stm, tasty
-     , tasty-discover, tasty-quickcheck, time
+    ({ mkDerivation, base, binary, bytestring, containers, Diff
+     , hashable, mtl, network-info, safe, stm, time, vector
      }:
      mkDerivation {
        pname = "crdt";
-       version = "6.2";
-       sha256 = "0d88s8wj3679v4hjgh2jzhsp3iscbh8ph8vkc2rv528abkxfrqfv";
+       version = "9.1";
+       sha256 = "1rhwbwhaxx15jpy9jacdxcrqfxh8nm84w5jadsrb947nhjjwczj6";
        libraryHaskellDepends = [
-         base binary bytestring containers mtl network-info safe stm time
-       ];
-       testHaskellDepends = [
-         base containers QuickCheck quickcheck-instances tasty
-         tasty-discover tasty-quickcheck
+         base binary bytestring containers Diff hashable mtl network-info
+         safe stm time vector
        ];
        homepage = "https://github.com/cblp/crdt#readme";
        description = "Conflict-free replicated data types";
@@ -53561,6 +54014,30 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "cryptonite_0_25" = callPackage
+    ({ mkDerivation, base, basement, bytestring, deepseq, gauge
+     , ghc-prim, integer-gmp, memory, random, tasty, tasty-hunit
+     , tasty-kat, tasty-quickcheck
+     }:
+     mkDerivation {
+       pname = "cryptonite";
+       version = "0.25";
+       sha256 = "131wbbdr5yavs5k1ah9sz6fqx1ffyvaxf66pwjzsfc47mwc1mgl9";
+       libraryHaskellDepends = [
+         base basement bytestring deepseq ghc-prim integer-gmp memory
+       ];
+       testHaskellDepends = [
+         base bytestring memory tasty tasty-hunit tasty-kat tasty-quickcheck
+       ];
+       benchmarkHaskellDepends = [
+         base bytestring deepseq gauge memory random
+       ];
+       homepage = "https://github.com/haskell-crypto/cryptonite";
+       description = "Cryptography Primitives sink";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "cryptonite-conduit" = callPackage
     ({ mkDerivation, base, bytestring, conduit, conduit-combinators
      , conduit-extra, cryptonite, exceptions, memory, resourcet, tasty
@@ -53828,11 +54305,11 @@ self: {
     ({ mkDerivation, attoparsec, base, hspec, QuickCheck, text }:
      mkDerivation {
        pname = "css-text";
-       version = "0.1.2.2";
-       sha256 = "11qrwrjqk2k4bm3bz1qcyscp146raz1hgpzynkd50yaq12n69xfz";
+       version = "0.1.3.0";
+       sha256 = "0ynd9f4hn2sfwqzbsa0y7phmxq8za7jiblpjwx0ry8b372zhgxaz";
        libraryHaskellDepends = [ attoparsec base text ];
        testHaskellDepends = [ attoparsec base hspec QuickCheck text ];
-       homepage = "http://www.yesodweb.com/";
+       homepage = "https://github.com/yesodweb/css-text.git#readme";
        description = "CSS parser and renderer";
        license = stdenv.lib.licenses.mit;
      }) {};
@@ -53867,10 +54344,6 @@ self: {
          mtl primitive resourcet text transformers unordered-containers
          vector
        ];
-       executableHaskellDepends = [
-         base bytestring containers directory mtl primitive text
-         transformers vector
-       ];
        testHaskellDepends = [
          base bytestring containers directory HUnit mtl primitive
          test-framework test-framework-hunit text transformers vector
@@ -54023,9 +54496,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base bytestring cereal containers STL ];
-       executableHaskellDepends = [
-         base bytestring cereal containers hspec STL
-       ];
        testHaskellDepends = [
          base bytestring cereal containers hspec STL
        ];
@@ -54134,6 +54604,28 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "cuda_0_9_0_1" = callPackage
+    ({ mkDerivation, base, bytestring, c2hs, Cabal, directory, filepath
+     , pretty, template-haskell
+     }:
+     mkDerivation {
+       pname = "cuda";
+       version = "0.9.0.1";
+       sha256 = "1ldn1jd12kisx6dgz5q50l6hx5aqakwj9vq2fbnx21ri309vlyq8";
+       isLibrary = true;
+       isExecutable = true;
+       setupHaskellDepends = [ base Cabal directory filepath ];
+       libraryHaskellDepends = [
+         base bytestring filepath template-haskell
+       ];
+       libraryToolDepends = [ c2hs ];
+       executableHaskellDepends = [ base pretty ];
+       homepage = "https://github.com/tmcdonell/cuda";
+       description = "FFI binding to the CUDA interface for programming NVIDIA GPUs";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "cudd" = callPackage
     ({ mkDerivation, array, base, c2hs, cudd, mtl, transformers }:
      mkDerivation {
@@ -54724,6 +55216,7 @@ self: {
        testHaskellDepends = [ base bytestring hspec HUnit QuickCheck ];
        description = "Parsing dAmn messages";
        license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "danibot" = callPackage
@@ -56045,8 +56538,8 @@ self: {
     ({ mkDerivation, base, doctest }:
      mkDerivation {
        pname = "data-forest";
-       version = "0.1.0.5";
-       sha256 = "05hpi0xr4bp7jigb6qa48n02widxxcn9npjh1y876mkgsdpd4x01";
+       version = "0.1.0.6";
+       sha256 = "11iisc82cgma5pp6apnjg112dd4cvqxclwf09zh9rh50lzkml9dk";
        libraryHaskellDepends = [ base ];
        testHaskellDepends = [ base doctest ];
        homepage = "https://github.com/chris-martin/data-forest";
@@ -56128,6 +56621,8 @@ self: {
        pname = "data-interval";
        version = "1.3.0";
        sha256 = "1i00cci7lzvkxqd1l8dacn7i0mrnccbs23mdciz6nrhlvlgsfiy9";
+       revision = "1";
+       editedCabalFile = "09n6gklg64lgn4x1f48ga9ynssyl4fm8x376blls1mx1xg6kgbz6";
        libraryHaskellDepends = [
          base containers deepseq extended-reals hashable lattices
        ];
@@ -56565,7 +57060,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base containers ];
-       executableHaskellDepends = [ base ];
        homepage = "http://ku-fpg.github.io/software/data-reify/";
        description = "Reify a recursive data structure into an explicit graph";
        license = stdenv.lib.licenses.bsd3;
@@ -57115,8 +57609,8 @@ self: {
     ({ mkDerivation, base, dates, hspec, QuickCheck, time }:
      mkDerivation {
        pname = "date-conversions";
-       version = "0.2.0.0";
-       sha256 = "1bx8r66wfghrfbmcyddsi6z5b66kc9skrq0hnk2mvz4gx2cl0gdq";
+       version = "0.3.0.0";
+       sha256 = "086vmgq58n2gcmz93idngh2hq1zfz8d231qazjzv19p08np5j3zm";
        libraryHaskellDepends = [ base dates time ];
        testHaskellDepends = [ base dates hspec QuickCheck time ];
        homepage = "https://github.com/thoughtbot/date-conversions#readme";
@@ -57995,6 +58489,37 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "debug_0_1" = callPackage
+    ({ mkDerivation, aeson, base, bytestring, clock, containers
+     , deepseq, directory, extra, filepath, ghc-prim, hashable, Hoed
+     , js-jquery, libgraph, monoidal-containers, open-browser
+     , prettyprinter, prettyprinter-compat-ansi-wl-pprint
+     , template-haskell, text, uniplate, unordered-containers, vector
+     , yaml
+     }:
+     mkDerivation {
+       pname = "debug";
+       version = "0.1";
+       sha256 = "05wnaz5p5szba0r6sqz5c0db63wpscmip635v1x35nv3crb2j1r0";
+       isLibrary = true;
+       isExecutable = true;
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         aeson base bytestring clock containers deepseq directory extra
+         ghc-prim hashable Hoed js-jquery libgraph monoidal-containers
+         open-browser prettyprinter prettyprinter-compat-ansi-wl-pprint
+         template-haskell text uniplate unordered-containers vector
+       ];
+       executableHaskellDepends = [ aeson base directory filepath yaml ];
+       testHaskellDepends = [
+         aeson base bytestring containers directory extra filepath text
+       ];
+       homepage = "https://github.com/ndmitchell/debug";
+       description = "Simple trace-based debugger";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "debug-diff" = callPackage
     ({ mkDerivation, base, groom, process, temporary }:
      mkDerivation {
@@ -58533,14 +59058,14 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "dejafu_1_0_0_1" = callPackage
+  "dejafu_1_0_0_2" = callPackage
     ({ mkDerivation, base, concurrency, containers, deepseq, exceptions
      , leancheck, profunctors, random, ref-fd, transformers
      }:
      mkDerivation {
        pname = "dejafu";
-       version = "1.0.0.1";
-       sha256 = "1v2hizvwf4clvqwwaab6ijlmwv7n97h8ag7dw9a63w4lipfl2anf";
+       version = "1.0.0.2";
+       sha256 = "0j98kvqi746swpw6jsg8vfjw16y7d0nmiysxfsl7yrnqzma9nyx6";
        libraryHaskellDepends = [
          base concurrency containers deepseq exceptions leancheck
          profunctors random ref-fd transformers
@@ -58780,6 +59305,25 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "dependency" = callPackage
+    ({ mkDerivation, ansi-wl-pprint, base, binary, containers
+     , criterion, deepseq, hspec, microlens, recursion-schemes, tardis
+     , transformers
+     }:
+     mkDerivation {
+       pname = "dependency";
+       version = "0.1.0.9";
+       sha256 = "02xlq32xpww584ng5wzzlxmh8d15dqc342mlnfiysh2lfdwqydzk";
+       libraryHaskellDepends = [
+         ansi-wl-pprint base binary containers deepseq microlens
+         recursion-schemes tardis transformers
+       ];
+       testHaskellDepends = [ base containers hspec ];
+       benchmarkHaskellDepends = [ base containers criterion ];
+       description = "Dependency resolution for package management";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "dependent-map" = callPackage
     ({ mkDerivation, base, containers, dependent-sum }:
      mkDerivation {
@@ -59103,16 +59647,16 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "deriving-compat_0_4" = callPackage
+  "deriving-compat_0_4_1" = callPackage
     ({ mkDerivation, base, base-compat, base-orphans, containers
-     , ghc-boot-th, ghc-prim, hspec, QuickCheck, tagged
+     , ghc-boot-th, ghc-prim, hspec, hspec-discover, QuickCheck, tagged
      , template-haskell, th-abstraction, transformers
      , transformers-compat
      }:
      mkDerivation {
        pname = "deriving-compat";
-       version = "0.4";
-       sha256 = "1jza92p1x3dbm4gx891miaihq3ly30mlz20ddwdsz0xyk7c1wk15";
+       version = "0.4.1";
+       sha256 = "0lzcbnvzcnrrvr61mrqdx4i8fylknf4jwrpncxr9lhpxgp4fqqk4";
        libraryHaskellDepends = [
          base containers ghc-boot-th ghc-prim template-haskell
          th-abstraction transformers transformers-compat
@@ -59121,6 +59665,7 @@ self: {
          base base-compat base-orphans hspec QuickCheck tagged
          template-haskell transformers transformers-compat
        ];
+       testToolDepends = [ hspec-discover ];
        homepage = "https://github.com/haskell-compat/deriving-compat";
        description = "Backports of GHC deriving extensions";
        license = stdenv.lib.licenses.bsd3;
@@ -59583,19 +60128,6 @@ self: {
     ({ mkDerivation, base, dhall, optparse-generic, text }:
      mkDerivation {
        pname = "dhall-text";
-       version = "1.0.4";
-       sha256 = "1ba2sljiq016jhgx7ifh5vjrwxd1czv2gm56h2pig3p0x45ds2wm";
-       isLibrary = false;
-       isExecutable = true;
-       executableHaskellDepends = [ base dhall optparse-generic text ];
-       description = "Template text using Dhall";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "dhall-text_1_0_5" = callPackage
-    ({ mkDerivation, base, dhall, optparse-generic, text }:
-     mkDerivation {
-       pname = "dhall-text";
        version = "1.0.5";
        sha256 = "195nfflpk787m8jjmspw2x4rb2s7vd0z5wz5s0bzfwdl6c7xgg27";
        isLibrary = false;
@@ -59603,7 +60135,6 @@ self: {
        executableHaskellDepends = [ base dhall optparse-generic text ];
        description = "Template text using Dhall";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "dhcp-lease-parser" = callPackage
@@ -59808,6 +60339,34 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "diagrams-contrib_1_4_2_1" = callPackage
+    ({ mkDerivation, base, circle-packing, colour, containers
+     , cubicbezier, data-default, data-default-class, diagrams-core
+     , diagrams-lib, diagrams-solve, force-layout, hashable, HUnit, lens
+     , linear, mfsolve, MonadRandom, monoid-extras, mtl, mtl-compat
+     , parsec, QuickCheck, random, semigroups, split, test-framework
+     , test-framework-hunit, test-framework-quickcheck2, text
+     }:
+     mkDerivation {
+       pname = "diagrams-contrib";
+       version = "1.4.2.1";
+       sha256 = "1l7xz360chrqj9by6l5v0vwpvy81lniif600r3b6vf9ckyj747yz";
+       libraryHaskellDepends = [
+         base circle-packing colour containers cubicbezier data-default
+         data-default-class diagrams-core diagrams-lib diagrams-solve
+         force-layout hashable lens linear mfsolve MonadRandom monoid-extras
+         mtl mtl-compat parsec random semigroups split text
+       ];
+       testHaskellDepends = [
+         base containers diagrams-lib HUnit QuickCheck test-framework
+         test-framework-hunit test-framework-quickcheck2
+       ];
+       homepage = "http://projects.haskell.org/diagrams/";
+       description = "Collection of user contributions to diagrams EDSL";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "diagrams-core" = callPackage
     ({ mkDerivation, adjunctions, base, containers, distributive
      , dual-tree, lens, linear, monoid-extras, mtl, profunctors
@@ -61494,12 +62053,12 @@ self: {
      }) {};
 
   "display" = callPackage
-    ({ mkDerivation, base, bytestring }:
+    ({ mkDerivation, base, bytestring, text }:
      mkDerivation {
        pname = "display";
-       version = "0.0.0";
-       sha256 = "1z5spl8l4n2x17szlyra2m1973ppgd9xqw851zgnmrvlp79gr0ls";
-       libraryHaskellDepends = [ base bytestring ];
+       version = "0.0.1";
+       sha256 = "0hn1zdis621h87r4mr35vic9473iwqcdjnmmfgs1j5dfsh62kd6b";
+       libraryHaskellDepends = [ base bytestring text ];
        homepage = "https://github.com/chrisdone/display#readme";
        description = "Display things for humans to read";
        license = stdenv.lib.licenses.bsd3;
@@ -61577,8 +62136,8 @@ self: {
      }:
      mkDerivation {
        pname = "distributed-closure";
-       version = "0.3.4.0";
-       sha256 = "1c7jf2czaaf24l22aw1j4yj9nksycvsvj708vzj9lb50zhdbpdgg";
+       version = "0.3.5";
+       sha256 = "0mm3w8l63n9lbifrj32kv5xbb79fiwd4swi2kv2lbnc67b6ig43h";
        libraryHaskellDepends = [
          base binary bytestring constraints syb template-haskell
        ];
@@ -61588,14 +62147,14 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "distributed-closure_0_3_5" = callPackage
+  "distributed-closure_0_4_0" = callPackage
     ({ mkDerivation, base, binary, bytestring, constraints, hspec
      , QuickCheck, syb, template-haskell
      }:
      mkDerivation {
        pname = "distributed-closure";
-       version = "0.3.5";
-       sha256 = "0mm3w8l63n9lbifrj32kv5xbb79fiwd4swi2kv2lbnc67b6ig43h";
+       version = "0.4.0";
+       sha256 = "1r2ymmnm0misz92x4iz58yqyb4maf3kq8blsvxmclc0d77hblsnm";
        libraryHaskellDepends = [
          base binary bytestring constraints syb template-haskell
        ];
@@ -61882,8 +62441,8 @@ self: {
      }:
      mkDerivation {
        pname = "distributed-process-p2p";
-       version = "0.1.3.2";
-       sha256 = "13m283cwlas0xzqxlrmnwmwimwy29hbvymavyqffd1b0k2m6ag31";
+       version = "0.1.4.0";
+       sha256 = "0wl5cnh2swymj3h4hrvkkfl7d5hrmxl1ayiyv9yjbr6gm72i11vj";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -62121,7 +62680,6 @@ self: {
          base binary bytestring containers deepseq distributed-process hzk
          mtl network network-transport network-transport-tcp transformers
        ];
-       executableHaskellDepends = [ base distributed-process ];
        testHaskellDepends = [
          base bytestring deepseq distributed-process
          distributed-process-monad-control enclosed-exceptions hspec hzk
@@ -62210,8 +62768,8 @@ self: {
        pname = "distributive";
        version = "0.5.3";
        sha256 = "0y566r97sfyvhsmd4yxiz4ns2mqgwf5bdbp56wgxl6wlkidq0wwi";
-       revision = "3";
-       editedCabalFile = "17qqdl8p04vy314jp045100989lh84cbhqv6ghizm87xpk7ck4j3";
+       revision = "4";
+       editedCabalFile = "1v6b2vnharppjn6w36lxfy0dvl93jzjq7fcyq9cp71650f1g9ai5";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          base base-orphans tagged transformers transformers-compat
@@ -62884,6 +63442,37 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "doctest_0_14_0" = callPackage
+    ({ mkDerivation, base, base-compat, code-page, deepseq, directory
+     , filepath, ghc, ghc-paths, hspec, HUnit, mockery, process
+     , QuickCheck, setenv, silently, stringbuilder, syb, transformers
+     , with-location
+     }:
+     mkDerivation {
+       pname = "doctest";
+       version = "0.14.0";
+       sha256 = "18qia153653fib1jdrdyvxa3wjcfhdn371r97mwv03q915i4bm3g";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         base base-compat code-page deepseq directory filepath ghc ghc-paths
+         process syb transformers
+       ];
+       executableHaskellDepends = [
+         base base-compat code-page deepseq directory filepath ghc ghc-paths
+         process syb transformers
+       ];
+       testHaskellDepends = [
+         base base-compat code-page deepseq directory filepath ghc ghc-paths
+         hspec HUnit mockery process QuickCheck setenv silently
+         stringbuilder syb transformers with-location
+       ];
+       homepage = "https://github.com/sol/doctest#readme";
+       description = "Test interactive Haskell examples";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "doctest-discover" = callPackage
     ({ mkDerivation, aeson, base, bytestring, directory, doctest
      , filepath
@@ -62907,6 +63496,30 @@ self: {
        license = stdenv.lib.licenses.publicDomain;
      }) {};
 
+  "doctest-discover_0_1_0_8" = callPackage
+    ({ mkDerivation, aeson, base, bytestring, directory, doctest
+     , filepath
+     }:
+     mkDerivation {
+       pname = "doctest-discover";
+       version = "0.1.0.8";
+       sha256 = "1ilmrc173d5xr7yphrbgg4kmkilyj1a89c67q4zrs4b6xfd5pa2x";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         aeson base bytestring directory doctest filepath
+       ];
+       executableHaskellDepends = [
+         aeson base bytestring directory doctest filepath
+       ];
+       testHaskellDepends = [ base doctest ];
+       doHaddock = false;
+       homepage = "http://github.com/karun012/doctest-discover";
+       description = "Easy way to run doctests via cabal";
+       license = stdenv.lib.licenses.publicDomain;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "doctest-discover-configurator" = callPackage
     ({ mkDerivation, base, bytestring, configurator, directory, doctest
      , filepath
@@ -62952,6 +63565,23 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "doctest-driver-gen_0_2_0_0" = callPackage
+    ({ mkDerivation, base, doctest }:
+     mkDerivation {
+       pname = "doctest-driver-gen";
+       version = "0.2.0.0";
+       sha256 = "02irp8bwr8172m5ix6jgpbhz3nks5khq31v03b5xlrh58nk5hqaf";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [ base doctest ];
+       executableHaskellDepends = [ base ];
+       testHaskellDepends = [ base doctest ];
+       homepage = "https://github.com/Hexirp/doctest-driver-gen#readme";
+       description = "Generate driver file for doctest's cabal integration";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "doctest-prop" = callPackage
     ({ mkDerivation, base, doctest, HUnit, QuickCheck }:
      mkDerivation {
@@ -63267,7 +63897,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base containers ];
-       executableHaskellDepends = [ base ];
        homepage = "https://github.com/ku-fpg/dotgen";
        description = "A simple interface for building .dot graph files.";
        license = stdenv.lib.licenses.bsd3;
@@ -64121,7 +64750,7 @@ self: {
 
   "dublincore-xml-conduit" = callPackage
     ({ mkDerivation, base, bytestring, conduit, conduit-combinators
-     , data-default, hlint, QuickCheck, quickcheck-instances, resourcet
+     , data-default, QuickCheck, quickcheck-instances, resourcet
      , safe-exceptions, tasty, tasty-hunit, tasty-quickcheck, text, time
      , timerep, uri-bytestring, xml-conduit, xml-types
      }:
@@ -64134,10 +64763,9 @@ self: {
          uri-bytestring xml-conduit xml-types
        ];
        testHaskellDepends = [
-         base bytestring conduit conduit-combinators data-default hlint
-         QuickCheck quickcheck-instances resourcet safe-exceptions tasty
-         tasty-hunit tasty-quickcheck text time uri-bytestring xml-conduit
-         xml-types
+         base bytestring conduit conduit-combinators data-default QuickCheck
+         quickcheck-instances resourcet safe-exceptions tasty tasty-hunit
+         tasty-quickcheck text time uri-bytestring xml-conduit xml-types
        ];
        homepage = "https://github.com/k0ral/dublincore-xml-conduit";
        description = "XML streaming parser/renderer for the Dublin Core standard elements";
@@ -64680,15 +65308,13 @@ self: {
      }) {};
 
   "dynobud" = callPackage
-    ({ mkDerivation, aeson, base, binary, bytestring, casadi-bindings
-     , casadi-bindings-core, cereal, Chart, Chart-gtk, cmdargs, colour
-     , containers, data-default-class, directory, distributive, doctest
-     , generic-accessors, hmatrix, hmatrix-gsl, HUnit, jacobi-roots
-     , lens, linear, mtl, mwc-random, not-gloss, Plot-ho-matic, process
-     , QuickCheck, reflection, semigroups, spatial-math, stm
+    ({ mkDerivation, aeson, base, binary, casadi-bindings
+     , casadi-bindings-core, cereal, containers, data-default-class
+     , directory, distributive, doctest, generic-accessors, hmatrix
+     , hmatrix-gsl, HUnit, jacobi-roots, lens, linear, mtl, mwc-random
+     , Plot-ho-matic, process, QuickCheck, reflection, spatial-math
      , test-framework, test-framework-hunit, test-framework-quickcheck2
-     , time, unordered-containers, vector, vector-binary-instances
-     , zeromq4-haskell
+     , time, vector, vector-binary-instances
      }:
      mkDerivation {
        pname = "dynobud";
@@ -64703,12 +65329,6 @@ self: {
          mwc-random Plot-ho-matic process reflection spatial-math time
          vector vector-binary-instances
        ];
-       executableHaskellDepends = [
-         base bytestring casadi-bindings casadi-bindings-core cereal Chart
-         Chart-gtk cmdargs colour containers data-default-class
-         generic-accessors lens linear mtl not-gloss Plot-ho-matic
-         semigroups stm time unordered-containers vector zeromq4-haskell
-       ];
        testHaskellDepends = [
          base binary casadi-bindings cereal containers doctest hmatrix
          hmatrix-gsl HUnit linear QuickCheck test-framework
@@ -65057,7 +65677,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base process ];
-       executableHaskellDepends = [ base ];
        homepage = "https://github.com/RyanGlScott/echo";
        description = "A cross-platform, cross-console way to handle echoing terminal input";
        license = stdenv.lib.licenses.bsd3;
@@ -65087,8 +65706,8 @@ self: {
     ({ mkDerivation, base, containers, mtl, transformers }:
      mkDerivation {
        pname = "ecstasy";
-       version = "0.1.0.0";
-       sha256 = "0hid87vwyzxf1fsp0y8yw69wpsxzljyjr27bm1q7b79r9zsg63vj";
+       version = "0.1.1.0";
+       sha256 = "06j5fpgrcf8nwwvs52gwdd55g7pxxv3ygsz5g08g8ap7wl2i9mby";
        libraryHaskellDepends = [ base containers mtl transformers ];
        homepage = "http://github.com/isovector/ecstasy/";
        description = "A GHC.Generics based entity component system.";
@@ -65607,7 +66226,7 @@ self: {
 
   "ehs" = callPackage
     ({ mkDerivation, base, bytestring, haskell-src-meta, parsec
-     , template-haskell, text, time, transformers
+     , template-haskell, text, transformers
      }:
      mkDerivation {
        pname = "ehs";
@@ -65621,7 +66240,6 @@ self: {
          base bytestring haskell-src-meta parsec template-haskell text
          transformers
        ];
-       executableHaskellDepends = [ base bytestring text time ];
        homepage = "http://github.com/minpou/ehs/";
        description = "Embedded haskell template using quasiquotes";
        license = stdenv.lib.licenses.mit;
@@ -65707,8 +66325,8 @@ self: {
     ({ mkDerivation, base, doctest }:
      mkDerivation {
        pname = "either-list-functions";
-       version = "0.0.0.1";
-       sha256 = "1k5zpyii5wkzr1xzfbkl015sj91pghl93ifjs6shgyysyh6b62z5";
+       version = "0.0.0.2";
+       sha256 = "0m7fkf8r1i0z3zrfmnqsdzk0fc9mhanqmx7x6rjiisjiaf91yr8d";
        libraryHaskellDepends = [ base ];
        testHaskellDepends = [ base doctest ];
        homepage = "https://github.com/chris-martin/either-list-functions#readme";
@@ -65951,7 +66569,6 @@ self: {
        libraryHaskellDepends = [
          base bytestring ekg-core text time unordered-containers
        ];
-       executableHaskellDepends = [ base ekg-core ];
        homepage = "https://github.com/adarqui/ekg-push";
        description = "Small framework to push metric deltas to a broadcast channel using the ekg-core library";
        license = stdenv.lib.licenses.bsd3;
@@ -66123,16 +66740,14 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "eliminators_0_4" = callPackage
+  "eliminators_0_4_1" = callPackage
     ({ mkDerivation, base, extra, hspec, hspec-discover, singleton-nats
      , singletons, template-haskell, th-abstraction, th-desugar
      }:
      mkDerivation {
        pname = "eliminators";
-       version = "0.4";
-       sha256 = "1lsvz498db2vlaj4d9p4bi4pl4cnsl27gmmhw1ipfxw4kxmfdf4z";
-       revision = "1";
-       editedCabalFile = "188dnmw7gwfp4fxyljhb3gv78bj9gai4v2if8d9gcnss6ykp5mn1";
+       version = "0.4.1";
+       sha256 = "000x3gjwyf2s44ry16a2a9dk7cqjvl0dh21r5k85s19ljrxsxv1v";
        libraryHaskellDepends = [
          base extra singleton-nats singletons template-haskell
          th-abstraction th-desugar
@@ -66162,19 +66777,19 @@ self: {
      }) {};
 
   "elm-bridge" = callPackage
-    ({ mkDerivation, aeson, base, containers, hspec, hspec-discover
-     , QuickCheck, template-haskell, text
+    ({ mkDerivation, aeson, base, containers, hspec, QuickCheck
+     , template-haskell, text
      }:
      mkDerivation {
        pname = "elm-bridge";
-       version = "0.4.2";
-       sha256 = "1mcaic3xdll6bdv4yjp0j0861yapgfgb4wd0ckh7dpcmcnfnarhx";
+       version = "0.4.3";
+       sha256 = "154i3vwqw5qyam14x8dvpgffcgh2ljdl1hc9zw6xhiwb82vazy3z";
        libraryHaskellDepends = [ aeson base template-haskell ];
        testHaskellDepends = [
-         aeson base containers hspec hspec-discover QuickCheck text
+         aeson base containers hspec QuickCheck text
        ];
        homepage = "https://github.com/agrafix/elm-bridge";
-       description = "Derive Elm types and Json code from Haskell types";
+       description = "Derive Elm types and Json code from Haskell types, using aeson's options";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
@@ -67058,8 +67673,8 @@ self: {
      }:
      mkDerivation {
        pname = "engine-io-wai";
-       version = "1.0.7";
-       sha256 = "13aa7x94z32c2gfzwjxh9808alcwqhxmxgn42r4jyqfylis2p73a";
+       version = "1.0.8";
+       sha256 = "0mph6pg3j81kwwl73dn5hdbw3mndfxi2wqdgwb727znh058xh7zb";
        libraryHaskellDepends = [
          attoparsec base bytestring either engine-io http-types mtl text
          transformers transformers-compat unordered-containers wai
@@ -67336,6 +67951,21 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "enumset_0_0_4_1" = callPackage
+    ({ mkDerivation, base, data-accessor, semigroups, storable-record
+     }:
+     mkDerivation {
+       pname = "enumset";
+       version = "0.0.4.1";
+       sha256 = "0m6ha4m9hvmzkgnwani3z3vgcllzgv6n578g56x4sb9bgxgi37az";
+       libraryHaskellDepends = [
+         base data-accessor semigroups storable-record
+       ];
+       description = "Sets of enumeration values represented by machine words";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "env-locale" = callPackage
     ({ mkDerivation, base, old-locale, time }:
      mkDerivation {
@@ -68476,7 +69106,7 @@ self: {
      }) {};
 
   "euler-tour-tree" = callPackage
-    ({ mkDerivation, base, containers, fingertree, hlint, keys, mtl
+    ({ mkDerivation, base, containers, fingertree, keys, mtl
      , parser-combinators, QuickCheck, sequence, tasty, tasty-hunit
      , tasty-quickcheck, transformers, Unique
      }:
@@ -68489,7 +69119,7 @@ self: {
          Unique
        ];
        testHaskellDepends = [
-         base containers hlint keys QuickCheck sequence tasty tasty-hunit
+         base containers keys QuickCheck sequence tasty tasty-hunit
          tasty-quickcheck
        ];
        homepage = "https://github.com/k0ral/euler-tour-tree";
@@ -68616,6 +69246,27 @@ self: {
        license = "GPL";
      }) {};
 
+  "event-list_0_1_2" = callPackage
+    ({ mkDerivation, base, non-negative, QuickCheck, random, semigroups
+     , transformers, utility-ht
+     }:
+     mkDerivation {
+       pname = "event-list";
+       version = "0.1.2";
+       sha256 = "177q99iswmanh34wlgklw1djvv5v1c0b5ysyi7mdmb70fsw30kk2";
+       libraryHaskellDepends = [
+         base non-negative QuickCheck semigroups transformers utility-ht
+       ];
+       testHaskellDepends = [
+         base non-negative QuickCheck random semigroups transformers
+         utility-ht
+       ];
+       homepage = "http://code.haskell.org/~thielema/event-list/";
+       description = "Event lists with relative or absolute time stamps";
+       license = "GPL";
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "event-monad" = callPackage
     ({ mkDerivation, base, containers, event-handlers, haskell98
      , monad-loops, mtl, pretty, prettyclass, priority-queue, stateref
@@ -69143,9 +69794,7 @@ self: {
      }) {};
 
   "exact-cover" = callPackage
-    ({ mkDerivation, base, boxes, containers, safe, tasty, tasty-hunit
-     , vector
-     }:
+    ({ mkDerivation, base, containers, tasty, tasty-hunit }:
      mkDerivation {
        pname = "exact-cover";
        version = "0.1.0.0";
@@ -69153,7 +69802,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base containers ];
-       executableHaskellDepends = [ base boxes containers safe vector ];
        testHaskellDepends = [ base containers tasty tasty-hunit ];
        homepage = "https://github.com/arthurl/exact-cover";
        description = "Efficient exact cover solver";
@@ -69162,18 +69810,6 @@ self: {
      }) {};
 
   "exact-pi" = callPackage
-    ({ mkDerivation, base, numtype-dk }:
-     mkDerivation {
-       pname = "exact-pi";
-       version = "0.4.1.2";
-       sha256 = "1qs5zi9c87sypnxdwncdj7dnrylly7s2yvjhm7rx4fxsbxrfdfxj";
-       libraryHaskellDepends = [ base numtype-dk ];
-       homepage = "https://github.com/dmcclean/exact-pi/";
-       description = "Exact rational multiples of pi (and integer powers of pi)";
-       license = stdenv.lib.licenses.mit;
-     }) {};
-
-  "exact-pi_0_4_1_3" = callPackage
     ({ mkDerivation, base, numtype-dk, semigroups }:
      mkDerivation {
        pname = "exact-pi";
@@ -69183,7 +69819,6 @@ self: {
        homepage = "https://github.com/dmcclean/exact-pi/";
        description = "Exact rational multiples of pi (and integer powers of pi)";
        license = stdenv.lib.licenses.mit;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "exact-real" = callPackage
@@ -69499,27 +70134,25 @@ self: {
      }) {inherit (pkgs) exif;};
 
   "exinst" = callPackage
-    ({ mkDerivation, aeson, base, binary, bytes, bytestring, cereal
-     , constraints, deepseq, hashable, profunctors, QuickCheck
-     , singletons, tasty, tasty-hunit, tasty-quickcheck
+    ({ mkDerivation, aeson, base, binary, bytes, bytestring, cborg
+     , cereal, constraints, deepseq, hashable, profunctors, QuickCheck
+     , serialise, singletons, tasty, tasty-hunit, tasty-quickcheck
      }:
      mkDerivation {
        pname = "exinst";
-       version = "0.4";
-       sha256 = "0n7fk3gjwyvw8k9paznwfgc8bgg7aiz9brfzkcfl3q57hr84dwj9";
-       revision = "1";
-       editedCabalFile = "01rwd7q00c86l73pfkq7k1qvw3ijpiy66axckj9702s2xc962dji";
+       version = "0.5";
+       sha256 = "1r6hy9kkfn24zszb9jd4p6w3wa4nwd2ds8mvb3k9rl20gc3zzhhi";
        libraryHaskellDepends = [
-         aeson base binary bytes cereal constraints deepseq hashable
-         profunctors QuickCheck singletons
+         aeson base binary bytes cborg cereal constraints deepseq hashable
+         profunctors QuickCheck serialise singletons
        ];
        testHaskellDepends = [
-         aeson base binary bytes bytestring cereal constraints deepseq
-         hashable profunctors QuickCheck singletons tasty tasty-hunit
-         tasty-quickcheck
+         aeson base binary bytes bytestring cborg cereal constraints deepseq
+         hashable profunctors QuickCheck serialise singletons tasty
+         tasty-hunit tasty-quickcheck
        ];
        homepage = "https://github.com/k0001/exinst";
-       description = "Recover type indexes and instances for your existentialized types";
+       description = "Dependent pairs and their instances";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
@@ -69806,6 +70439,21 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "explicit-exception_0_1_9_2" = callPackage
+    ({ mkDerivation, base, deepseq, semigroups, transformers }:
+     mkDerivation {
+       pname = "explicit-exception";
+       version = "0.1.9.2";
+       sha256 = "1xj9fqh28br5xyzzc28zl23jj913ayhikvwcw9ccj3pqfybh5xk0";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [ base deepseq semigroups transformers ];
+       homepage = "http://www.haskell.org/haskellwiki/Exception";
+       description = "Exceptions which are explicit in the type signature";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "explicit-iomodes" = callPackage
     ({ mkDerivation, base, base-unicode-symbols, tagged }:
      mkDerivation {
@@ -69908,19 +70556,17 @@ self: {
      }) {};
 
   "expressions" = callPackage
-    ({ mkDerivation, attoparsec, base, containers, lattices, QuickCheck
-     , singletons, tasty, tasty-quickcheck, text, transformers
+    ({ mkDerivation, attoparsec, base, containers, lattices, singletons
+     , text, transformers
      }:
      mkDerivation {
        pname = "expressions";
-       version = "0.1.4";
-       sha256 = "1dxkg5yc2njq7dpv7vgkmrs73x5np5w1ahi79my6ysamnc2w8a04";
+       version = "0.1.5";
+       sha256 = "1iw6i922wjvs844gqqvmvhvfaq8c06lxlca806s6rbk0sxq40nmz";
        libraryHaskellDepends = [
          attoparsec base containers lattices singletons text transformers
        ];
-       testHaskellDepends = [
-         base QuickCheck singletons tasty tasty-quickcheck text
-       ];
+       testHaskellDepends = [ base singletons text ];
        description = "Expressions and Formulae a la carte";
        license = stdenv.lib.licenses.bsd3;
      }) {};
@@ -69931,8 +70577,8 @@ self: {
      }:
      mkDerivation {
        pname = "expressions-z3";
-       version = "0.1.1";
-       sha256 = "0hk8qhkvlh4v210k7d845krg31px72ma44fmwahbycn6pgy32659";
+       version = "0.1.2";
+       sha256 = "0q3fnljdsqh1937a8s9a62cmcg1nc787725jp0j32jlmbwwhkfyv";
        libraryHaskellDepends = [
          base containers expressions singletons transformers z3
        ];
@@ -69997,20 +70643,17 @@ self: {
      }) {};
 
   "extended-reals" = callPackage
-    ({ mkDerivation, base, deepseq, hashable, HUnit, QuickCheck
-     , test-framework, test-framework-hunit, test-framework-quickcheck2
-     , test-framework-th
+    ({ mkDerivation, base, deepseq, hashable, HUnit, QuickCheck, tasty
+     , tasty-hunit, tasty-quickcheck, tasty-th
      }:
      mkDerivation {
        pname = "extended-reals";
-       version = "0.2.2.0";
-       sha256 = "14wskq0m3sclb2c1m3aqsaj26rijbzyy021qkvxjdpzskz13higj";
-       revision = "2";
-       editedCabalFile = "1vsh115lals5sqp2rkj7gp9b1jc0rg92x5fb51p8jckqr4f43pma";
+       version = "0.2.3.0";
+       sha256 = "170nxxza6lkczh05qi2qxr8nbr3gmdjpfvl1m703gjq9xwrwg2kw";
        libraryHaskellDepends = [ base deepseq hashable ];
        testHaskellDepends = [
-         base deepseq HUnit QuickCheck test-framework test-framework-hunit
-         test-framework-quickcheck2 test-framework-th
+         base deepseq HUnit QuickCheck tasty tasty-hunit tasty-quickcheck
+         tasty-th
        ];
        homepage = "https://github.com/msakai/extended-reals/";
        description = "Extension of real numbers with positive/negative infinities";
@@ -70560,17 +71203,14 @@ self: {
 
   "fast-arithmetic" = callPackage
     ({ mkDerivation, arithmoi, ats-setup, base, Cabal, combinat
-     , composition-prelude, criterion, hspec, QuickCheck
-     , recursion-schemes
+     , composition-prelude, criterion, gmpint, hspec, QuickCheck
      }:
      mkDerivation {
        pname = "fast-arithmetic";
-       version = "0.3.2.4";
-       sha256 = "0dvrwlcpfsrrw8la5brvhjc78k48s2kaz08cg6xqx82vkrzipm63";
+       version = "0.3.2.5";
+       sha256 = "0sln2am6xrm73y3731gy1wabc8cdvnrksgzvrl0qwlinshc4pd74";
        setupHaskellDepends = [ ats-setup base Cabal ];
-       libraryHaskellDepends = [
-         base composition-prelude recursion-schemes
-       ];
+       libraryHaskellDepends = [ base composition-prelude gmpint ];
        testHaskellDepends = [ arithmoi base combinat hspec QuickCheck ];
        benchmarkHaskellDepends = [ arithmoi base combinat criterion ];
        homepage = "https://github.com/vmchale/fast-arithmetic#readme";
@@ -70645,8 +71285,8 @@ self: {
      }:
      mkDerivation {
        pname = "fast-logger";
-       version = "2.4.10";
-       sha256 = "13b7rrv8dw574k6lbl96nar67fx81058gvilsc42v0lgm38sbi6y";
+       version = "2.4.11";
+       sha256 = "1ad2vq4nifdxshqk9yrmghqizhkgybfz134kpr6padglb2mxxrdv";
        libraryHaskellDepends = [
          array auto-update base bytestring directory easy-file filepath text
          unix unix-time
@@ -71242,6 +71882,25 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "fclabels_2_0_3_3" = callPackage
+    ({ mkDerivation, base, criterion, HUnit, mtl, template-haskell
+     , transformers
+     }:
+     mkDerivation {
+       pname = "fclabels";
+       version = "2.0.3.3";
+       sha256 = "1q62p41bj991s7i15ciayw1v1xq8szn4bls50p65lfy2dnj7554s";
+       libraryHaskellDepends = [ base mtl template-haskell transformers ];
+       testHaskellDepends = [
+         base HUnit mtl template-haskell transformers
+       ];
+       benchmarkHaskellDepends = [ base criterion ];
+       homepage = "https://github.com/sebastiaanvisser/fclabels";
+       description = "First class accessor labels implemented as lenses";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "fclabels-monadlib" = callPackage
     ({ mkDerivation, base, fclabels, monadLib }:
      mkDerivation {
@@ -71370,6 +72029,23 @@ self: {
        license = stdenv.lib.licenses.gpl3;
      }) {};
 
+  "fedora-haskell-tools_0_5_1" = callPackage
+    ({ mkDerivation, base, directory, filepath, process, time, unix }:
+     mkDerivation {
+       pname = "fedora-haskell-tools";
+       version = "0.5.1";
+       sha256 = "1543i2lxzplqmx1cpggp5773qvqc6jzn4960c1cgyhg9mjd13adr";
+       isLibrary = false;
+       isExecutable = true;
+       executableHaskellDepends = [
+         base directory filepath process time unix
+       ];
+       homepage = "https://github.com/fedora-haskell/fedora-haskell-tools";
+       description = "Building and managing tools for Fedora Haskell";
+       license = stdenv.lib.licenses.gpl3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "fedora-packages" = callPackage
     ({ mkDerivation, aeson, base, bytestring, containers, hlint
      , HsOpenSSL, hspec, http-streams, io-streams, lens, text
@@ -71419,8 +72095,8 @@ self: {
        pname = "feed";
        version = "1.0.0.0";
        sha256 = "05rgg7x1984mgfhkmz792xj8lhwjgznixhygzr8blf517lns2nck";
-       revision = "1";
-       editedCabalFile = "19sckdba9c7pz7hhmjqv4hjm16bi5d1dsnknlh3y3f5n86ybj0pr";
+       revision = "2";
+       editedCabalFile = "1xrx0r63qr14vxqrsw9xmwnhna3p4gqngv46ysyv2r49raq6bz3q";
        enableSeparateDataOutput = true;
        libraryHaskellDepends = [
          base base-compat bytestring old-locale old-time safe text time
@@ -71813,7 +72489,7 @@ self: {
   "ffmpeg-light" = callPackage
     ({ mkDerivation, base, bytestring, either, exceptions, ffmpeg
      , JuicyPixels, libavcodec, libavdevice, libavformat, libswscale
-     , monad-loops, mtl, text, transformers, vector
+     , mtl, transformers, vector
      }:
      mkDerivation {
        pname = "ffmpeg-light";
@@ -71828,10 +72504,6 @@ self: {
        libraryPkgconfigDepends = [
          ffmpeg libavcodec libavdevice libavformat libswscale
        ];
-       executableHaskellDepends = [
-         base bytestring JuicyPixels monad-loops mtl text transformers
-         vector
-       ];
        homepage = "http://github.com/acowley/ffmpeg-light";
        description = "Minimal bindings to the FFmpeg library";
        license = stdenv.lib.licenses.bsd3;
@@ -72220,6 +72892,27 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "filecache_0_3_0" = callPackage
+    ({ mkDerivation, base, containers, directory, exceptions, filepath
+     , fsnotify, hspec, mtl, stm, strict-base-types, temporary, time
+     }:
+     mkDerivation {
+       pname = "filecache";
+       version = "0.3.0";
+       sha256 = "0lizyqksip8vw7gf0zi4ggfh07ql43avim25dwdlk9blv7kyxng4";
+       libraryHaskellDepends = [
+         base containers directory exceptions filepath fsnotify mtl stm
+         strict-base-types time
+       ];
+       testHaskellDepends = [
+         base containers directory filepath hspec stm temporary
+       ];
+       homepage = "http://lpuppet.banquise.net/";
+       description = "A cache system associating values to files";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "filediff" = callPackage
     ({ mkDerivation, base, bytestring, data-default
      , data-memocombinators, directory, either, hashmap, mtl, rainbow
@@ -72661,6 +73354,8 @@ self: {
        pname = "finite-field";
        version = "0.9.0";
        sha256 = "026l5qrc7vsm2s19z10xx30lrsfkwwcymyznyy5hrcrwqj9wf643";
+       revision = "1";
+       editedCabalFile = "0npwa4gv94b87y4bam9valnjlsy3rbhk7n7hdc1mx1bwkn4acyds";
        libraryHaskellDepends = [
          base deepseq hashable singletons template-haskell
        ];
@@ -73124,6 +73819,7 @@ self: {
        homepage = "https://github.com/NorfairKing/fixer#readme";
        description = "A Haskell client for http://fixer.io/";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "fixfile" = callPackage
@@ -73266,8 +73962,8 @@ self: {
      }:
      mkDerivation {
        pname = "fizzbuzz-as-a-service";
-       version = "0.1.0.1";
-       sha256 = "1m2pyvhdj8phj2f1zka6v1p72hzhmaigw2v0n1zwkh3k4hkq90kg";
+       version = "0.1.0.2";
+       sha256 = "0bskyv1zyk469bikh4rh6ad1i8d5ym9s89a88aw34cpphy0vq1zk";
        isLibrary = false;
        isExecutable = true;
        executableHaskellDepends = [
@@ -73694,6 +74390,20 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "flow_1_0_11" = callPackage
+    ({ mkDerivation, base, doctest, QuickCheck, template-haskell }:
+     mkDerivation {
+       pname = "flow";
+       version = "1.0.11";
+       sha256 = "11cgab1wyqdjzyx6ygh91yl03w70aivspmlavl4if6p9yr5z9rw7";
+       libraryHaskellDepends = [ base ];
+       testHaskellDepends = [ base doctest QuickCheck template-haskell ];
+       homepage = "https://github.com/tfausak/flow#readme";
+       description = "Write more understandable Haskell";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "flow-er" = callPackage
     ({ mkDerivation, base, doctest, flow, QuickCheck }:
      mkDerivation {
@@ -73869,7 +74579,7 @@ self: {
 
   "fltkhs" = callPackage
     ({ mkDerivation, base, bytestring, c2hs, Cabal, directory, filepath
-     , mtl, OpenGLRaw, parsec, text
+     , mtl, parsec, text
      }:
      mkDerivation {
        pname = "fltkhs";
@@ -73880,9 +74590,7 @@ self: {
        setupHaskellDepends = [ base Cabal directory filepath ];
        libraryHaskellDepends = [ base bytestring text ];
        libraryToolDepends = [ c2hs ];
-       executableHaskellDepends = [
-         base directory filepath mtl OpenGLRaw parsec text
-       ];
+       executableHaskellDepends = [ base directory filepath mtl parsec ];
        homepage = "http://github.com/deech/fltkhs";
        description = "FLTK bindings";
        license = stdenv.lib.licenses.mit;
@@ -74269,26 +74977,6 @@ self: {
      }:
      mkDerivation {
        pname = "foldl";
-       version = "1.3.5";
-       sha256 = "10qsp7dj2xsq4q2xm6x6b12y5pq32qf7my41hnkmdwwbccvhdxb2";
-       libraryHaskellDepends = [
-         base bytestring comonad containers contravariant hashable
-         mwc-random primitive profunctors semigroups text transformers
-         unordered-containers vector vector-builder
-       ];
-       benchmarkHaskellDepends = [ base criterion ];
-       description = "Composable, streaming, and efficient left folds";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "foldl_1_3_7" = callPackage
-    ({ mkDerivation, base, bytestring, comonad, containers
-     , contravariant, criterion, hashable, mwc-random, primitive
-     , profunctors, semigroups, text, transformers, unordered-containers
-     , vector, vector-builder
-     }:
-     mkDerivation {
-       pname = "foldl";
        version = "1.3.7";
        sha256 = "113966zyk1jj8l1k1izfix8bc1hmpr9w1zahkz592f56wmvmy8kn";
        libraryHaskellDepends = [
@@ -74299,7 +74987,6 @@ self: {
        benchmarkHaskellDepends = [ base criterion ];
        description = "Composable, streaming, and efficient left folds";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "foldl-incremental" = callPackage
@@ -75052,7 +75739,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ ansi-terminal base text ];
-       executableHaskellDepends = [ base ];
        testHaskellDepends = [ async base doctest hspec process ];
        homepage = "https://github.com/gianlucaguarini/fortytwo#readme";
        description = "Interactive terminal prompt";
@@ -75866,32 +76552,6 @@ self: {
      }:
      mkDerivation {
        pname = "freer-simple";
-       version = "1.0.0.0";
-       sha256 = "11nh0majlmn6aw5qzv5jfs6jx9vxk7jn72568frmryvymn2aqax8";
-       isLibrary = true;
-       isExecutable = true;
-       libraryHaskellDepends = [
-         base natural-transformation transformers-base
-       ];
-       executableHaskellDepends = [ base ];
-       testHaskellDepends = [
-         base QuickCheck tasty tasty-hunit tasty-quickcheck
-       ];
-       benchmarkHaskellDepends = [
-         base criterion extensible-effects free mtl
-       ];
-       homepage = "https://github.com/lexi-lambda/freer-simple#readme";
-       description = "Implementation of a friendly effect system for Haskell";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "freer-simple_1_0_1_1" = callPackage
-    ({ mkDerivation, base, criterion, extensible-effects, free, mtl
-     , natural-transformation, QuickCheck, tasty, tasty-hunit
-     , tasty-quickcheck, transformers-base
-     }:
-     mkDerivation {
-       pname = "freer-simple";
        version = "1.0.1.1";
        sha256 = "1fdxj1iyh8jl2nghrm51r7gvlk1qwzrjjhj13f0akwrm2s0la1jb";
        isLibrary = true;
@@ -75909,7 +76569,6 @@ self: {
        homepage = "https://github.com/lexi-lambda/freer-simple#readme";
        description = "Implementation of a friendly effect system for Haskell";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "freesect" = callPackage
@@ -75971,7 +76630,7 @@ self: {
      }) {};
 
   "freetype2" = callPackage
-    ({ mkDerivation, array, base }:
+    ({ mkDerivation, base }:
      mkDerivation {
        pname = "freetype2";
        version = "0.1.2";
@@ -75979,7 +76638,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base ];
-       executableHaskellDepends = [ array base ];
        description = "Haskell binding for FreeType 2 library";
        license = stdenv.lib.licenses.bsd3;
      }) {};
@@ -76595,8 +77253,8 @@ self: {
      }) {};
 
   "full-text-search" = callPackage
-    ({ mkDerivation, alex, array, base, containers, happy, QuickCheck
-     , tasty, tasty-quickcheck, text, vector
+    ({ mkDerivation, array, base, containers, QuickCheck, tasty
+     , tasty-quickcheck, text, vector
      }:
      mkDerivation {
        pname = "full-text-search";
@@ -76605,7 +77263,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ array base containers text vector ];
-       executableToolDepends = [ alex happy ];
        testHaskellDepends = [
          array base containers QuickCheck tasty tasty-quickcheck text vector
        ];
@@ -77139,29 +77796,8 @@ self: {
      }:
      mkDerivation {
        pname = "fuzzyset";
-       version = "0.1.0.4";
-       sha256 = "1nk3qrjcg5q4mnv2lzbw08ikgibix0ns6910z9xixcfq5kgij6my";
-       libraryHaskellDepends = [
-         base base-unicode-symbols data-default lens text text-metrics
-         unordered-containers vector
-       ];
-       testHaskellDepends = [
-         base base-unicode-symbols hspec ieee754 lens text
-         unordered-containers
-       ];
-       homepage = "https://github.com/laserpants/fuzzyset-haskell";
-       description = "Fuzzy set for approximate string matching";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "fuzzyset_0_1_0_5" = callPackage
-    ({ mkDerivation, base, base-unicode-symbols, data-default, hspec
-     , ieee754, lens, text, text-metrics, unordered-containers, vector
-     }:
-     mkDerivation {
-       pname = "fuzzyset";
-       version = "0.1.0.5";
-       sha256 = "12cl135ph7qjnfm0x36yw3mvjilsw4pm509yvh7i5whsafs3kakq";
+       version = "0.1.0.6";
+       sha256 = "18v1zsmdgy5if7l23vciip6dbbhbpgvn0dy0ray0pqwdcw9yh6kk";
        libraryHaskellDepends = [
          base base-unicode-symbols data-default lens text text-metrics
          unordered-containers vector
@@ -77173,7 +77809,6 @@ self: {
        homepage = "https://github.com/laserpants/fuzzyset-haskell";
        description = "Fuzzy set for approximate string matching";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "fuzzytime" = callPackage
@@ -77748,18 +78383,18 @@ self: {
      }) {};
 
   "gedcom" = callPackage
-    ({ mkDerivation, array, base, bytestring, containers, megaparsec
-     , monad-loops, mtl, text-all, time
+    ({ mkDerivation, array, base, bytestring, containers, hspec
+     , megaparsec, monad-loops, mtl, text-all, time
      }:
      mkDerivation {
        pname = "gedcom";
-       version = "0.1.0.0";
-       sha256 = "099y6vgw81v31aijyl81hdijs5vry77jg4qy2gl8w7scn2zp2p58";
+       version = "0.2.0.0";
+       sha256 = "1hwjrljmwr7ywi213lxvfp6c98ydlxngr7hrhcx7ylngw165al7y";
        libraryHaskellDepends = [
          array base bytestring containers megaparsec monad-loops mtl
          text-all time
        ];
-       testHaskellDepends = [ base ];
+       testHaskellDepends = [ base hspec megaparsec text-all ];
        homepage = "https://github.com/CLowcay/hs-gedcom";
        description = "Parser for the GEDCOM genealogy file format";
        license = stdenv.lib.licenses.bsd3;
@@ -78076,6 +78711,24 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "general-games_1_1_1" = callPackage
+    ({ mkDerivation, base, hspec, HUnit, monad-loops, MonadRandom
+     , random, random-shuffle
+     }:
+     mkDerivation {
+       pname = "general-games";
+       version = "1.1.1";
+       sha256 = "1h2h6dbd12xzvgwm7a26scpjyfkcwkmpdkw98nkmb2vk8qsrx3lb";
+       libraryHaskellDepends = [
+         base monad-loops MonadRandom random random-shuffle
+       ];
+       testHaskellDepends = [ base hspec HUnit MonadRandom ];
+       homepage = "https://github.com/cgorski/general-games";
+       description = "Library supporting simulation of a number of games";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "general-prelude" = callPackage
     ({ mkDerivation, base, lens, pointless-fun, strict, system-filepath
      }:
@@ -78133,6 +78786,7 @@ self: {
        ];
        description = "stringly-named getters for generic data";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "generic-aeson" = callPackage
@@ -78685,8 +79339,8 @@ self: {
     ({ mkDerivation, base, mtl, template-haskell }:
      mkDerivation {
        pname = "geniplate-mirror";
-       version = "0.7.5";
-       sha256 = "17vjps2118s5z3k39ij00lkmkxv3mqf8h59wv6qdamlgmhyr36si";
+       version = "0.7.6";
+       sha256 = "1y0m0bw5zpm1y1y6d9qmxj3swl8j8hlw1shxbr5awycf6k884ssb";
        libraryHaskellDepends = [ base mtl template-haskell ];
        homepage = "https://github.com/danr/geniplate";
        description = "Use Template Haskell to generate Uniplate-like functions";
@@ -79281,10 +79935,10 @@ self: {
      }:
      mkDerivation {
        pname = "geos";
-       version = "0.1.0.0";
-       sha256 = "02r9c063kkqalyadfqwhhwfb42kky7nkfp5k968l1qidyx6aha5j";
+       version = "0.1.1.1";
+       sha256 = "0z4kqlgqg016233f8smj6jzjd6n7cgsvyff0npnghv1gdlr9pfwc";
        libraryHaskellDepends = [
-         base bytestring cassava mtl transformers vector
+         base bytestring mtl transformers vector
        ];
        librarySystemDepends = [ geos_c ];
        testHaskellDepends = [ base bytestring cassava hspec mtl vector ];
@@ -79361,9 +80015,9 @@ self: {
   "gf" = callPackage
     ({ mkDerivation, alex, array, base, bytestring, Cabal, cgi
      , containers, directory, exceptions, filepath, happy, haskeline
-     , HTF, httpd-shed, HUnit, json, lifted-base, mtl, network
-     , network-uri, old-locale, parallel, pretty, process, random
-     , terminfo, time, time-compat, unix, utf8-string
+     , HTF, httpd-shed, HUnit, json, mtl, network, network-uri
+     , old-locale, parallel, pretty, process, random, terminfo, time
+     , time-compat, unix, utf8-string
      }:
      mkDerivation {
        pname = "gf";
@@ -79379,7 +80033,7 @@ self: {
          utf8-string
        ];
        libraryToolDepends = [ alex happy ];
-       executableHaskellDepends = [ base containers lifted-base mtl ];
+       executableHaskellDepends = [ base ];
        testHaskellDepends = [
          base Cabal directory filepath HTF HUnit process
        ];
@@ -79633,11 +80287,31 @@ self: {
          array base binary bytestring containers text vector
        ];
        executableHaskellDepends = [ base containers ];
-       testHaskellDepends = [ base bytestring ];
+       testHaskellDepends = [ base ];
        description = "Library and tool for parsing .eventlog files from GHC";
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "ghc-events_0_7_1" = callPackage
+    ({ mkDerivation, array, base, binary, bytestring, containers, text
+     , vector
+     }:
+     mkDerivation {
+       pname = "ghc-events";
+       version = "0.7.1";
+       sha256 = "0cpmc107rhy28700qa2jixdp78jw7hsmni40v90z5is9b048mk3i";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         array base binary bytestring containers text vector
+       ];
+       executableHaskellDepends = [ base containers ];
+       testHaskellDepends = [ base ];
+       description = "Library and tool for parsing .eventlog files from GHC";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "ghc-events-analyze" = callPackage
     ({ mkDerivation, base, containers, diagrams-lib, diagrams-svg
      , filepath, ghc-events, lens, mtl, optparse-applicative, parsec
@@ -79692,30 +80366,6 @@ self: {
      }:
      mkDerivation {
        pname = "ghc-exactprint";
-       version = "0.5.5.0";
-       sha256 = "0k3y39k1cwb3bs85333gj7fi6l5p9nr950vgzbyswgj13qb4g7b1";
-       isLibrary = true;
-       isExecutable = true;
-       libraryHaskellDepends = [
-         base bytestring containers directory filepath free ghc ghc-boot
-         ghc-paths mtl syb
-       ];
-       testHaskellDepends = [
-         base bytestring containers Diff directory filemanip filepath ghc
-         ghc-boot ghc-paths HUnit mtl silently syb
-       ];
-       description = "ExactPrint for GHC";
-       license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
-     }) {};
-
-  "ghc-exactprint_0_5_6_0" = callPackage
-    ({ mkDerivation, base, bytestring, containers, Diff, directory
-     , filemanip, filepath, free, ghc, ghc-boot, ghc-paths, HUnit, mtl
-     , silently, syb
-     }:
-     mkDerivation {
-       pname = "ghc-exactprint";
        version = "0.5.6.0";
        sha256 = "0fbq7p2kykqq2pzf0mld0brj3pdrgxb1zvpa05pqxsfs66czlbsg";
        isLibrary = true;
@@ -79848,6 +80498,7 @@ self: {
        homepage = "https://github.com/nomeata/ghc-justdoit";
        description = "A magic typeclass that just does it";
        license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "ghc-make" = callPackage
@@ -79886,9 +80537,8 @@ self: {
      , extra, fclabels, filepath, ghc, ghc-boot, ghc-paths
      , ghc-syb-utils, haskell-src-exts, hlint, hspec, monad-control
      , monad-journal, mtl, old-time, optparse-applicative, pipes
-     , process, safe, semigroups, shelltest, split, syb
-     , template-haskell, temporary, text, time, transformers
-     , transformers-base
+     , process, safe, semigroups, split, syb, template-haskell
+     , temporary, text, time, transformers, transformers-base
      }:
      mkDerivation {
        pname = "ghc-mod";
@@ -79920,7 +80570,6 @@ self: {
          ghc ghc-boot hspec monad-journal mtl process split temporary
          transformers
        ];
-       testToolDepends = [ shelltest ];
        benchmarkHaskellDepends = [
          base criterion directory filepath temporary
        ];
@@ -79928,7 +80577,7 @@ self: {
        description = "Happy Haskell Hacking";
        license = stdenv.lib.licenses.agpl3;
        hydraPlatforms = stdenv.lib.platforms.none;
-     }) {shelltest = null;};
+     }) {};
 
   "ghc-mtl" = callPackage
     ({ mkDerivation, base, exceptions, extensible-exceptions, ghc, mtl
@@ -80076,14 +80725,13 @@ self: {
      }:
      mkDerivation {
        pname = "ghc-prof";
-       version = "1.4.0.4";
-       sha256 = "037g6ianbij9gx1324fbdmamqjkn6mmw9nvqh5bwpz33srf30lpn";
+       version = "1.4.1";
+       sha256 = "1jpf2pn37vgwqcnsm799g9s9d7qbxk9d305b6i2k12573cv1x8r4";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
          attoparsec base containers scientific text time
        ];
-       executableHaskellDepends = [ base containers scientific text ];
        testHaskellDepends = [
          attoparsec base containers directory filepath process tasty
          tasty-hunit temporary text
@@ -80230,7 +80878,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ attoparsec base containers text time ];
-       executableHaskellDepends = [ attoparsec base containers text ];
        testHaskellDepends = [
          attoparsec base directory filepath process tasty tasty-hunit
          temporary text
@@ -80314,7 +80961,7 @@ self: {
 
   "ghc-typelits-presburger" = callPackage
     ({ mkDerivation, base, equational-reasoning, ghc
-     , ghc-tcplugins-extra, presburger, reflection, singletons
+     , ghc-tcplugins-extra, presburger, reflection
      }:
      mkDerivation {
        pname = "ghc-typelits-presburger";
@@ -80328,9 +80975,6 @@ self: {
          base equational-reasoning ghc ghc-tcplugins-extra presburger
          reflection
        ];
-       executableHaskellDepends = [
-         base equational-reasoning singletons
-       ];
        homepage = "https://github.com/konn/ghc-typelits-presburger#readme";
        description = "Presburger Arithmetic Solver for GHC Type-level natural numbers";
        license = stdenv.lib.licenses.bsd3;
@@ -80488,8 +81132,8 @@ self: {
      }:
      mkDerivation {
        pname = "ghcid";
-       version = "0.6.9";
-       sha256 = "0bkhbzjjp4n97dsf8q4ggphsfh0rxwgdn4kmg8l87zbrih41gdpc";
+       version = "0.6.10";
+       sha256 = "1qqd619pwdlcxvkgfawsqq19a5kl1584ra35ib8769874i6y9awj";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -80567,7 +81211,7 @@ self: {
 
   "ghcjs-dom-hello" = callPackage
     ({ mkDerivation, base, ghcjs-dom, jsaddle, jsaddle-warp
-     , jsaddle-webkit2gtk, jsaddle-wkwebview, mtl
+     , jsaddle-webkit2gtk, mtl
      }:
      mkDerivation {
        pname = "ghcjs-dom-hello";
@@ -80580,8 +81224,7 @@ self: {
          base ghcjs-dom jsaddle jsaddle-warp mtl
        ];
        executableHaskellDepends = [
-         base ghcjs-dom jsaddle-warp jsaddle-webkit2gtk jsaddle-wkwebview
-         mtl
+         base ghcjs-dom jsaddle-warp jsaddle-webkit2gtk mtl
        ];
        homepage = "https://github.com/ghcjs/ghcjs-dom-hello";
        description = "GHCJS DOM Hello World, an example package";
@@ -80602,16 +81245,11 @@ self: {
      }) {};
 
   "ghcjs-dom-jsffi" = callPackage
-    ({ mkDerivation, base, ghc-prim, ghcjs-base, ghcjs-prim, text
-     , transformers
-     }:
+    ({ mkDerivation }:
      mkDerivation {
        pname = "ghcjs-dom-jsffi";
        version = "0.9.2.0";
        sha256 = "1xj94izrypxnb91lgsq0lfzqqs11sxbs24nkw8sn2wkmmh5pd8vd";
-       libraryHaskellDepends = [
-         base ghc-prim ghcjs-base ghcjs-prim text transformers
-       ];
        description = "DOM library using JSFFI and GHCJS";
        license = stdenv.lib.licenses.mit;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -80704,9 +81342,6 @@ self: {
          base containers ghc-prim ghcjs-base ghcjs-ffiqq ghcjs-prim split
          template-haskell
        ];
-       executableHaskellDepends = [
-         base containers ghcjs-base ghcjs-ffiqq
-       ];
        description = "Virtual-dom bindings for GHCJS";
        license = stdenv.lib.licenses.mit;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -81833,7 +82468,6 @@ self: {
          microlens microlens-th mtl network-uri servant servant-client text
          transformers
        ];
-       executableHaskellDepends = [ base network-uri text ];
        testHaskellDepends = [
          aeson base basic-prelude bytestring containers directory hspec lens
          network-uri text
@@ -82001,6 +82635,28 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "git-config" = callPackage
+    ({ mkDerivation, base, megaparsec, smallcheck, smallcheck-series
+     , tasty, tasty-discover, tasty-hunit, tasty-smallcheck
+     , tasty-travis, text, unordered-containers
+     }:
+     mkDerivation {
+       pname = "git-config";
+       version = "0.1.1";
+       sha256 = "0vspjqscw02x3hr6n0d0d4kyjfh5lij4wy58fp4z301vmyv77vgl";
+       libraryHaskellDepends = [
+         base megaparsec text unordered-containers
+       ];
+       testHaskellDepends = [
+         base megaparsec smallcheck smallcheck-series tasty tasty-discover
+         tasty-hunit tasty-smallcheck tasty-travis text unordered-containers
+       ];
+       homepage = "https://github.com/dogonthehorizon/git-config#readme";
+       description = "A simple parser for Git configuration files";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "git-date" = callPackage
     ({ mkDerivation, base, bytestring, old-locale, QuickCheck
      , test-framework, test-framework-quickcheck2, time, utf8-string
@@ -82359,6 +83015,39 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "github_0_19" = callPackage
+    ({ mkDerivation, aeson, aeson-compat, base, base-compat
+     , base16-bytestring, binary, binary-orphans, byteable, bytestring
+     , containers, cryptohash, deepseq, deepseq-generics, exceptions
+     , file-embed, hashable, hspec, hspec-discover, http-client
+     , http-client-tls, http-link-header, http-types, iso8601-time, mtl
+     , network-uri, semigroups, text, time, tls, transformers
+     , transformers-compat, unordered-containers, vector
+     , vector-instances
+     }:
+     mkDerivation {
+       pname = "github";
+       version = "0.19";
+       sha256 = "1523p2rv4jwsbsqjc9g3qff4cy5dhdy5wzp382x5nr11rmbrpsph";
+       libraryHaskellDepends = [
+         aeson aeson-compat base base-compat base16-bytestring binary
+         binary-orphans byteable bytestring containers cryptohash deepseq
+         deepseq-generics exceptions hashable http-client http-client-tls
+         http-link-header http-types iso8601-time mtl network-uri semigroups
+         text time tls transformers transformers-compat unordered-containers
+         vector vector-instances
+       ];
+       testHaskellDepends = [
+         aeson-compat base base-compat bytestring file-embed hspec
+         unordered-containers vector
+       ];
+       testToolDepends = [ hspec-discover ];
+       homepage = "https://github.com/phadej/github";
+       description = "Access to the GitHub API, v3";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "github-backup" = callPackage
     ({ mkDerivation, base, bytestring, Cabal, containers, directory
      , exceptions, filepath, git, github, hslogger, IfElse, mtl, network
@@ -82435,27 +83124,6 @@ self: {
      }:
      mkDerivation {
        pname = "github-release";
-       version = "1.1.2";
-       sha256 = "0czc53xwg21jvd7g4ggjva0nzc2rpyf36rc4876dss9lckcc2p93";
-       isLibrary = true;
-       isExecutable = true;
-       libraryHaskellDepends = [
-         aeson base bytestring http-client http-client-tls http-types
-         mime-types optparse-generic text unordered-containers uri-templater
-       ];
-       executableHaskellDepends = [ base ];
-       homepage = "https://github.com/tfausak/github-release#readme";
-       description = "Upload files to GitHub releases";
-       license = stdenv.lib.licenses.mit;
-     }) {};
-
-  "github-release_1_1_3" = callPackage
-    ({ mkDerivation, aeson, base, bytestring, http-client
-     , http-client-tls, http-types, mime-types, optparse-generic, text
-     , unordered-containers, uri-templater
-     }:
-     mkDerivation {
-       pname = "github-release";
        version = "1.1.3";
        sha256 = "040yd8npjv54xfh4fv4i1p9x6qsa5qj1m5wblr7xjf0w090sblf0";
        isLibrary = true;
@@ -82468,7 +83136,6 @@ self: {
        homepage = "https://github.com/tfausak/github-release#readme";
        description = "Upload files to GitHub releases";
        license = stdenv.lib.licenses.mit;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "github-tools" = callPackage
@@ -83251,6 +83918,8 @@ self: {
        pname = "glirc";
        version = "2.25";
        sha256 = "1hh6zqkk1cm50n7d17i2490q2xh7hzy63krpj58rwhgpmn3ps5sb";
+       revision = "1";
+       editedCabalFile = "13bf4rcwik6lq4rv1ci9i01hpmvvbqd1xs7fixrk10qsjm31cakw";
        isLibrary = true;
        isExecutable = true;
        setupHaskellDepends = [ base Cabal filepath ];
@@ -83782,6 +84451,18 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "gmpint" = callPackage
+    ({ mkDerivation, base, recursion-schemes }:
+     mkDerivation {
+       pname = "gmpint";
+       version = "0.1.0.4";
+       sha256 = "023acr1a69b9r380zlk8bsgfjw0l4h381pk7bwar7mbv3zzsnmxn";
+       libraryHaskellDepends = [ base recursion-schemes ];
+       homepage = "https://github.com/vmchale/gmpint#readme";
+       description = "GMP integer conversions";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "gnome-desktop" = callPackage
     ({ mkDerivation, base, directory, gconf, glib, gtk, random }:
      mkDerivation {
@@ -83907,6 +84588,29 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "gnuplot_0_5_5_1" = callPackage
+    ({ mkDerivation, array, base, containers, data-accessor
+     , data-accessor-transformers, deepseq, filepath, process
+     , semigroups, temporary, time, transformers, utility-ht
+     }:
+     mkDerivation {
+       pname = "gnuplot";
+       version = "0.5.5.1";
+       sha256 = "1i0rlmk6kqv1lj71s1av64qc14qmaaplp6z9mxd9hkwjpwzyqdma";
+       isLibrary = true;
+       isExecutable = true;
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         array base containers data-accessor data-accessor-transformers
+         deepseq filepath process semigroups temporary time transformers
+         utility-ht
+       ];
+       homepage = "http://www.haskell.org/haskellwiki/Gnuplot";
+       description = "2D and 3D plots using gnuplot";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "gnutls" = callPackage
     ({ mkDerivation, base, bytestring, gnutls, monads-tf, transformers
      }:
@@ -84134,6 +84838,48 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "goggles_0_3_2" = callPackage
+    ({ mkDerivation, aeson, attoparsec, base, base64-bytestring, binary
+     , bytestring, containers, cryptonite, exceptions, filepath, hspec
+     , http-client, http-client-tls, http-types, memory, mtl, pem
+     , QuickCheck, req, scientific, stm, text, time, transformers
+     , unix-time, x509, x509-store
+     }:
+     mkDerivation {
+       pname = "goggles";
+       version = "0.3.2";
+       sha256 = "0g798gvxyqr08digpb61cvfcwg626iwmz9dqyg32w5vba332akd6";
+       libraryHaskellDepends = [
+         aeson attoparsec base base64-bytestring binary bytestring
+         containers cryptonite exceptions filepath http-client
+         http-client-tls http-types memory mtl pem req scientific stm text
+         time transformers unix-time x509 x509-store
+       ];
+       testHaskellDepends = [ base hspec QuickCheck ];
+       homepage = "https://github.com/ocramz/goggles";
+       description = "Extensible interface to Web APIs";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
+  "goggles-gcs" = callPackage
+    ({ mkDerivation, aeson, base, bytestring, cryptonite, exceptions
+     , goggles, memory, mtl, req, text, unix-time
+     }:
+     mkDerivation {
+       pname = "goggles-gcs";
+       version = "0.1.0.0";
+       sha256 = "0g23z852g7f1h8s49q4nj0y2lnm4fa0ycs4d633937i3f18bsl74";
+       libraryHaskellDepends = [
+         aeson base bytestring cryptonite exceptions goggles memory mtl req
+         text unix-time
+       ];
+       homepage = "https://github.com/ocramz/goggles-gcs";
+       description = "`goggles` interface to Google Cloud Storage";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "gogol" = callPackage
     ({ mkDerivation, aeson, base, bytestring, case-insensitive, conduit
      , conduit-extra, cryptonite, directory, exceptions, filepath
@@ -85862,10 +86608,9 @@ self: {
      }) {};
 
   "gore-and-ash-lambdacube" = callPackage
-    ({ mkDerivation, base, containers, deepseq, exceptions, GLFW-b
-     , gore-and-ash, gore-and-ash-glfw, hashable, JuicyPixels
-     , lambdacube-compiler, lambdacube-gl, lambdacube-ir, linear, mtl
-     , text, transformers, unordered-containers, vector
+    ({ mkDerivation, base, containers, deepseq, exceptions
+     , gore-and-ash, hashable, lambdacube-compiler, lambdacube-gl, mtl
+     , text, unordered-containers
      }:
      mkDerivation {
        pname = "gore-and-ash-lambdacube";
@@ -85877,11 +86622,6 @@ self: {
          base containers deepseq exceptions gore-and-ash hashable
          lambdacube-compiler lambdacube-gl mtl text unordered-containers
        ];
-       executableHaskellDepends = [
-         base containers deepseq exceptions GLFW-b gore-and-ash
-         gore-and-ash-glfw JuicyPixels lambdacube-compiler lambdacube-gl
-         lambdacube-ir linear mtl text transformers vector
-       ];
        homepage = "https://github.com/TeaspotStudio/gore-and-ash-lambdacube#readme";
        description = "Core module for Gore&Ash engine that do something";
        license = stdenv.lib.licenses.bsd3;
@@ -86768,8 +87508,8 @@ self: {
      }:
      mkDerivation {
        pname = "graphql-api";
-       version = "0.2.0";
-       sha256 = "08hsrqh4v7fmkmilwnmxpii8iqkhc0affcv3mmjmp3my0qi79xrl";
+       version = "0.3.0";
+       sha256 = "1rn47xxyz3wkflz2ji0d496r8w0jcf1a0al14gclflbyd4bzkpwy";
        libraryHaskellDepends = [
          aeson attoparsec base containers exceptions ghc-prim protolude
          QuickCheck scientific text transformers
@@ -86781,8 +87521,8 @@ self: {
        benchmarkHaskellDepends = [
          attoparsec base criterion exceptions protolude transformers
        ];
-       homepage = "https://github.com/jml/graphql-api#readme";
-       description = "Sketch of GraphQL stuff";
+       homepage = "https://github.com/haskell-graphql/graphql-api#readme";
+       description = "GraphQL API";
        license = stdenv.lib.licenses.asl20;
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
@@ -86850,9 +87590,6 @@ self: {
          base bytestring colour containers directory dlist fgl filepath
          polyparse process temporary text transformers wl-pprint-text
        ];
-       executableHaskellDepends = [
-         base bytestring directory filepath text
-       ];
        testHaskellDepends = [
          base containers fgl fgl-arbitrary filepath QuickCheck text
        ];
@@ -87665,6 +88402,7 @@ self: {
        ];
        description = "Generic implementation of Storable";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "gstreamer" = callPackage
@@ -88026,8 +88764,7 @@ self: {
 
   "gtk3" = callPackage
     ({ mkDerivation, array, base, bytestring, Cabal, cairo, containers
-     , gio, glib, gtk2hs-buildtools, gtk3, mtl, pango, text, time
-     , transformers
+     , gio, glib, gtk2hs-buildtools, gtk3, mtl, pango, text
      }:
      mkDerivation {
        pname = "gtk3";
@@ -88041,9 +88778,6 @@ self: {
          array base bytestring cairo containers gio glib mtl pango text
        ];
        libraryPkgconfigDepends = [ gtk3 ];
-       executableHaskellDepends = [
-         array base cairo text time transformers
-       ];
        homepage = "http://projects.haskell.org/gtk2hs/";
        description = "Binding to the Gtk+ 3 graphical user interface library";
        license = stdenv.lib.licenses.lgpl21;
@@ -89568,8 +90302,8 @@ self: {
        pname = "hackage-security";
        version = "0.5.2.2";
        sha256 = "0h9wag599x9ysdrgwa643phmpb1xiiwhyh2dix67fji6a5w86yjh";
-       revision = "4";
-       editedCabalFile = "154xjzmzg14zcqxzhcf0kmdmm6hwnhx19x6kddakkrylfqap14j2";
+       revision = "5";
+       editedCabalFile = "0f1ml7dvwk4xrz3gsf133n67cbxzf0sz5frxfsx9i79x1yrg9zdj";
        libraryHaskellDepends = [
          base base16-bytestring base64-bytestring bytestring Cabal
          containers cryptohash-sha256 directory ed25519 filepath ghc-prim
@@ -89604,8 +90338,8 @@ self: {
      }) {};
 
   "hackage-server" = callPackage
-    ({ mkDerivation, acid-state, aeson, alex, array, async, attoparsec
-     , base, base16-bytestring, base64-bytestring, binary, blaze-builder
+    ({ mkDerivation, acid-state, aeson, alex, array, async, base
+     , base16-bytestring, base64-bytestring, binary, blaze-builder
      , bytestring, Cabal, cereal, containers, crypto-api, csv, deepseq
      , directory, filepath, happstack-server, happy, HaXml, hscolour
      , hslogger, HStringTemplate, HTTP, lifted-base, mime-mail, mtl
@@ -89622,7 +90356,7 @@ self: {
        isExecutable = true;
        enableSeparateDataOutput = true;
        executableHaskellDepends = [
-         acid-state aeson array async attoparsec base base16-bytestring
+         acid-state aeson array async base base16-bytestring
          base64-bytestring binary blaze-builder bytestring Cabal cereal
          containers crypto-api csv deepseq directory filepath
          happstack-server HaXml hscolour hslogger HStringTemplate HTTP
@@ -90160,25 +90894,27 @@ self: {
      }) {};
 
   "hadolint" = callPackage
-    ({ mkDerivation, base, bytestring, directory, filepath, gitrev
-     , hspec, HUnit, language-docker, optparse-applicative, parsec
-     , ShellCheck, split, yaml
+    ({ mkDerivation, aeson, base, bytestring, directory, dlist
+     , filepath, gitrev, hspec, HUnit, language-docker
+     , optparse-applicative, parsec, ShellCheck, split, text, yaml
      }:
      mkDerivation {
        pname = "hadolint";
-       version = "1.3.0";
-       sha256 = "13z78q36x28h7yn282k03568hj0lvava678d7hhhp5hrbk6ni8xv";
+       version = "1.5.0";
+       sha256 = "05xhiwrq6v8v0hy08mhxbslj3ncvyi1jm8m5lv8xqngwcn3yax44";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
-         base bytestring language-docker parsec ShellCheck split
+         aeson base bytestring dlist language-docker parsec ShellCheck split
+         text
        ];
        executableHaskellDepends = [
          base directory filepath gitrev language-docker optparse-applicative
          parsec yaml
        ];
        testHaskellDepends = [
-         base bytestring hspec HUnit language-docker parsec ShellCheck split
+         aeson base bytestring hspec HUnit language-docker parsec ShellCheck
+         split
        ];
        homepage = "https://github.com/hadolint/hadolint";
        description = "Dockerfile Linter JavaScript API";
@@ -90684,7 +91420,7 @@ self: {
          time-locale-compat unordered-containers vector wai wai-app-static
          warp yaml
        ];
-       executableHaskellDepends = [ base directory filepath pandoc ];
+       executableHaskellDepends = [ base directory filepath ];
        testHaskellDepends = [
          base binary blaze-html blaze-markup bytestring containers
          cryptohash data-default deepseq directory filepath fsnotify
@@ -90858,6 +91594,19 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "hakyll-dir-list" = callPackage
+    ({ mkDerivation, base, containers, filepath, hakyll }:
+     mkDerivation {
+       pname = "hakyll-dir-list";
+       version = "0.1.1.0";
+       sha256 = "0j5amghlsjdnvi4klag6ifwwzy05v17bsf7j6lzl32hcx66a62qb";
+       libraryHaskellDepends = [ base containers filepath hakyll ];
+       homepage = "http://github.com/freylax/hakyll-dir-list";
+       description = "Allow Hakyll to create hierarchical menues from directories";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "hakyll-elm" = callPackage
     ({ mkDerivation, base, blaze-html, blaze-markup, Elm, hakyll, mtl
      }:
@@ -91597,8 +92346,8 @@ self: {
      }:
      mkDerivation {
        pname = "hapistrano";
-       version = "0.3.5.1";
-       sha256 = "1zpvwdq9dzfkq9jh1bpc5x8vh41508x0wph5a020q31rknc8llad";
+       version = "0.3.5.2";
+       sha256 = "0qabrvx93l8wmir4a0rg2iddsal455fx34vvdxj1ngbya25fspw4";
        isLibrary = true;
        isExecutable = true;
        enableSeparateDataOutput = true;
@@ -91637,7 +92386,7 @@ self: {
      }) {inherit (pkgs) libappindicator-gtk2;};
 
   "happindicator3" = callPackage
-    ({ mkDerivation, base, glib, gtk3, libappindicator-gtk3, text }:
+    ({ mkDerivation, base, glib, gtk3, libappindicator-gtk3 }:
      mkDerivation {
        pname = "happindicator3";
        version = "0.2.1";
@@ -91646,7 +92395,6 @@ self: {
        isExecutable = true;
        libraryHaskellDepends = [ base glib gtk3 ];
        libraryPkgconfigDepends = [ libappindicator-gtk3 ];
-       executableHaskellDepends = [ base gtk3 text ];
        homepage = "https://github.com/mlacorte/happindicator3";
        description = "Binding to the appindicator library";
        license = stdenv.lib.licenses.lgpl21;
@@ -91811,7 +92559,7 @@ self: {
   "happstack-contrib" = callPackage
     ({ mkDerivation, base, bytestring, directory, happstack-data
      , happstack-ixset, happstack-server, happstack-state
-     , happstack-util, HTTP, HUnit, mtl, network, old-time, syb, unix
+     , happstack-util, HTTP, mtl, network, old-time, syb, unix
      }:
      mkDerivation {
        pname = "happstack-contrib";
@@ -91824,7 +92572,6 @@ self: {
          happstack-server happstack-state happstack-util HTTP mtl network
          old-time syb unix
        ];
-       executableHaskellDepends = [ HUnit ];
        homepage = "http://happstack.com";
        description = "Web related tools and services";
        license = stdenv.lib.licenses.bsd3;
@@ -91878,8 +92625,8 @@ self: {
      , filepath, happstack, happstack-data, happstack-hsp
      , happstack-ixset, happstack-server, happstack-state
      , happstack-util, harp, hsp, hsx, html, HTTP, json, mtl, network
-     , old-time, random, RJson, syb, text, time, trhsx, utf8-string
-     , web-routes, web-routes-mtl
+     , old-time, random, RJson, syb, text, time, utf8-string, web-routes
+     , web-routes-mtl
      }:
      mkDerivation {
        pname = "happstack-facebook";
@@ -91894,7 +92641,6 @@ self: {
          network old-time random RJson syb text time utf8-string web-routes
          web-routes-mtl
        ];
-       executableToolDepends = [ trhsx ];
        homepage = "http://src.seereason.com/happstack-facebook/";
        description = "A package for building Facebook applications using Happstack";
        license = stdenv.lib.licenses.bsd3;
@@ -92182,25 +92928,6 @@ self: {
      }:
      mkDerivation {
        pname = "happstack-server-tls";
-       version = "7.1.6.4";
-       sha256 = "1wn0yv4x619sl70fy3ffby78lfjiq9d73d4rsp3mkgr6d3kn45wj";
-       libraryHaskellDepends = [
-         base bytestring extensible-exceptions happstack-server hslogger
-         HsOpenSSL network sendfile time unix
-       ];
-       librarySystemDepends = [ openssl ];
-       homepage = "http://www.happstack.com/";
-       description = "extend happstack-server with https:// support (TLS/SSL)";
-       license = stdenv.lib.licenses.bsd3;
-     }) {inherit (pkgs) openssl;};
-
-  "happstack-server-tls_7_1_6_5" = callPackage
-    ({ mkDerivation, base, bytestring, extensible-exceptions
-     , happstack-server, hslogger, HsOpenSSL, network, openssl, sendfile
-     , time, unix
-     }:
-     mkDerivation {
-       pname = "happstack-server-tls";
        version = "7.1.6.5";
        sha256 = "0hp13wxaghs6ldqpbpyf8agph7b1y488fc516z1n6bvbpzcbhbvq";
        libraryHaskellDepends = [
@@ -92211,7 +92938,6 @@ self: {
        homepage = "http://www.happstack.com/";
        description = "extend happstack-server with https:// support (TLS/SSL)";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {inherit (pkgs) openssl;};
 
   "happstack-server-tls-cryptonite" = callPackage
@@ -92344,8 +93070,10 @@ self: {
      }:
      mkDerivation {
        pname = "happy";
-       version = "1.19.8";
-       sha256 = "186ky3bly0i3cc56qk3r7j7pxh2108aackq4n2lli7jmbnb3kxsd";
+       version = "1.19.9";
+       sha256 = "138xpxdb7x62lpmgmb6b3v3vgdqqvqn4273jaap3mjmc2gla709y";
+       revision = "1";
+       editedCabalFile = "1lm706nv64cvfi3ccg7hc3217642sg0z9f9xz2ivbpzvzwwn8gj6";
        isLibrary = false;
        isExecutable = true;
        setupHaskellDepends = [ base Cabal directory filepath ];
@@ -93054,6 +93782,20 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "hashids_1_0_2_4" = callPackage
+    ({ mkDerivation, base, bytestring, containers, split }:
+     mkDerivation {
+       pname = "hashids";
+       version = "1.0.2.4";
+       sha256 = "1kzkyni9hfwpvyq9rdv62iziwiax5avzd05ghsh7dgnylv41z697";
+       libraryHaskellDepends = [ base bytestring containers split ];
+       testHaskellDepends = [ base bytestring containers split ];
+       homepage = "http://hashids.org/";
+       description = "Hashids generates short, unique, non-sequential ids from numbers";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "hashing" = callPackage
     ({ mkDerivation, array, base, bytestring, cryptonite, mtl
      , QuickCheck, template-haskell
@@ -94226,8 +94968,6 @@ self: {
        ];
        librarySystemDepends = [ open-pal open-rte openmpi ];
        libraryToolDepends = [ c2hs ];
-       executableSystemDepends = [ open-pal open-rte openmpi ];
-       executableToolDepends = [ c2hs ];
        homepage = "http://github.com/bjpop/haskell-mpi";
        description = "Distributed parallel programming in Haskell using MPI";
        license = stdenv.lib.licenses.bsd3;
@@ -94645,7 +95385,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base haskell-src-exts ];
-       executableHaskellDepends = [ base haskell-src-exts ];
        homepage = "https://github.com/achirkin/haskell-src-exts-sc#readme";
        description = "Pretty print haskell code with comments";
        license = stdenv.lib.licenses.bsd3;
@@ -96267,7 +97006,6 @@ self: {
          base data-accessor event-list haskore non-negative numeric-prelude
          random synthesizer-core synthesizer-filter utility-ht
        ];
-       executableHaskellDepends = [ base synthesizer-core utility-ht ];
        homepage = "http://www.haskell.org/haskellwiki/Synthesizer";
        description = "Music rendering coded in Haskell";
        license = "GPL";
@@ -96370,6 +97108,38 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "haskyapi" = callPackage
+    ({ mkDerivation, aeson, base, blaze-html, bytestring, containers
+     , directory, http-conduit, markdown, mtl, network, parsec
+     , persistent, persistent-sqlite, persistent-template, split
+     , tagsoup, text, time, utf8-string
+     }:
+     mkDerivation {
+       pname = "haskyapi";
+       version = "0.0.0.2";
+       sha256 = "1s5krzzmrl8p97xg8p1dimijqmyjbrdfm4i0dpp7jiipj2hzvqyq";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         aeson base blaze-html bytestring containers directory http-conduit
+         markdown mtl network parsec persistent persistent-sqlite
+         persistent-template split tagsoup text time utf8-string
+       ];
+       executableHaskellDepends = [
+         aeson base blaze-html bytestring containers directory http-conduit
+         markdown mtl network parsec persistent persistent-sqlite
+         persistent-template split tagsoup text time utf8-string
+       ];
+       testHaskellDepends = [
+         aeson base blaze-html bytestring containers directory http-conduit
+         markdown mtl network parsec persistent persistent-sqlite
+         persistent-template split tagsoup text time utf8-string
+       ];
+       homepage = "https://github.com/okue/haskyapi#readme";
+       description = "HTTP server";
+       license = stdenv.lib.licenses.mit;
+     }) {};
+
   "haslo" = callPackage
     ({ mkDerivation, base, mtl, old-time, QuickCheck, time, wtk }:
      mkDerivation {
@@ -96414,8 +97184,8 @@ self: {
        pname = "hasmin";
        version = "1.0.1";
        sha256 = "1h5ygl9qmzmbhqfb58hhm2zw850dqfkp4b8cp3bhsnangg4lgbjk";
-       revision = "2";
-       editedCabalFile = "0hav8khv14k41rf4lmh79w6ym4basrmmsjwfc5bww2qya7889d5k";
+       revision = "3";
+       editedCabalFile = "0v410xlx9riyhzxbqi2fx8qnw9i3k9cc6q24f0cz2ympl86f4019";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -96510,23 +97280,22 @@ self: {
      }) {};
 
   "hasql-class" = callPackage
-    ({ mkDerivation, base, bytestring, containers, contravariant
-     , data-default-class, doctest, generics-eot, Glob, hasql, hspec
-     , process, QuickCheck, quickcheck-instances, string-qq, text, time
-     , vector, yaml
+    ({ mkDerivation, base, bytestring, contravariant
+     , data-default-class, generics-eot, hasql, hspec, process
+     , QuickCheck, quickcheck-instances, string-qq, text, time, vector
      }:
      mkDerivation {
        pname = "hasql-class";
-       version = "0.0.1.0";
-       sha256 = "10d61avgsma6104d1bh3sfs1i4hrbpr0rhb7ihgi43xshg6wjvgl";
+       version = "0.1.0.0";
+       sha256 = "00va6klddkkr60zl9i9mx7lmryn71qbc4qfhw4q8fcwbw69bzc0f";
        libraryHaskellDepends = [
          base bytestring contravariant data-default-class generics-eot hasql
          text time vector
        ];
        testHaskellDepends = [
-         base bytestring containers contravariant data-default-class doctest
-         generics-eot Glob hasql hspec process QuickCheck
-         quickcheck-instances string-qq text time vector yaml
+         base bytestring contravariant data-default-class generics-eot hasql
+         hspec process QuickCheck quickcheck-instances string-qq text time
+         vector
        ];
        homepage = "http://github.com/turingjump/hasql-class#readme";
        description = "Encodable and Decodable classes for hasql";
@@ -96774,6 +97543,26 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "hasql-transaction_0_6" = callPackage
+    ({ mkDerivation, async, base, base-prelude, bytestring
+     , bytestring-tree-builder, contravariant, contravariant-extras
+     , hasql, mtl, rebase, transformers
+     }:
+     mkDerivation {
+       pname = "hasql-transaction";
+       version = "0.6";
+       sha256 = "00dxm78wscj88zb6wbyg48ps4a5cc41jbbknjrmxlgp0iw4hr06b";
+       libraryHaskellDepends = [
+         base base-prelude bytestring bytestring-tree-builder contravariant
+         contravariant-extras hasql mtl transformers
+       ];
+       testHaskellDepends = [ async hasql rebase ];
+       homepage = "https://github.com/nikita-volkov/hasql-transaction";
+       description = "A composable abstraction over the retryable transactions for Hasql";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "hastache" = callPackage
     ({ mkDerivation, base, blaze-builder, bytestring, containers
      , directory, filepath, HUnit, ieee754, mtl, process, syb, text
@@ -98327,6 +99116,8 @@ self: {
        pname = "heaps";
        version = "0.3.6";
        sha256 = "1cnxgmxxvl053yv93vcz5fnla4iir5g9wr697n88ysdyybbkq70q";
+       revision = "1";
+       editedCabalFile = "0k505k86zwfw1wmj5gr2qab7cq9q26f9nbf9jzfgw9qxwb17j284";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [ base ];
        testHaskellDepends = [ base directory doctest filepath ];
@@ -98336,14 +99127,14 @@ self: {
      }) {};
 
   "heapsort" = callPackage
-    ({ mkDerivation, array, base, QuickCheck }:
+    ({ mkDerivation, array, base }:
      mkDerivation {
        pname = "heapsort";
        version = "0.1.0";
        sha256 = "0fzws9fjhqsygsbwj7nvj786j16264vqvqzc97dr73y72538k9qa";
        isLibrary = true;
        isExecutable = true;
-       executableHaskellDepends = [ array base QuickCheck ];
+       executableHaskellDepends = [ array base ];
        homepage = "http://wiki.cs.pdx.edu/bartforge/heapsort";
        description = "Heapsort of MArrays as a demo of imperative programming";
        license = stdenv.lib.licenses.bsd3;
@@ -98473,22 +99264,23 @@ self: {
     ({ mkDerivation, ansi-terminal, async, base, bytestring
      , concurrent-output, containers, directory, exceptions
      , lifted-async, mmorph, monad-control, mtl, pretty-show, primitive
-     , random, resourcet, stm, template-haskell, text, th-lift, time
-     , transformers, transformers-base, unix, wl-pprint-annotated
+     , random, resourcet, semigroups, stm, template-haskell, text
+     , th-lift, time, transformers, transformers-base, unix
+     , wl-pprint-annotated
      }:
      mkDerivation {
        pname = "hedgehog";
-       version = "0.5.1";
-       sha256 = "0fx3dq45azxrhihhq6hlb89zkj3y8fmnfdrsz1wbvih9a3dhiwx7";
+       version = "0.5.2";
+       sha256 = "1nl6q4hlsqbwqjk3ywpd6hdyi3qyz34agrp9533lmkx7120jfblh";
        libraryHaskellDepends = [
          ansi-terminal async base bytestring concurrent-output containers
          directory exceptions lifted-async mmorph monad-control mtl
-         pretty-show primitive random resourcet stm template-haskell text
-         th-lift time transformers transformers-base unix
-         wl-pprint-annotated
+         pretty-show primitive random resourcet semigroups stm
+         template-haskell text th-lift time transformers transformers-base
+         unix wl-pprint-annotated
        ];
        testHaskellDepends = [
-         base containers pretty-show text transformers
+         base containers pretty-show semigroups text transformers
        ];
        homepage = "https://hedgehog.qa";
        description = "Hedgehog will eat all your bugs";
@@ -99995,8 +100787,6 @@ self: {
        libraryHaskellDepends = [ base ];
        librarySystemDepends = [ doublefann ];
        libraryPkgconfigDepends = [ fann ];
-       executableHaskellDepends = [ base ];
-       executableSystemDepends = [ doublefann ];
        description = "Haskell binding to the FANN library";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -100051,7 +100841,7 @@ self: {
      }) {};
 
   "hfmt" = callPackage
-    ({ mkDerivation, ansi-wl-pprint, base, bytestring, Cabal
+    ({ mkDerivation, ansi-wl-pprint, base, bytestring, Cabal, conduit
      , conduit-combinators, Diff, directory, exceptions, filepath
      , haskell-src-exts, hindent, hlint, HUnit, optparse-applicative
      , path, path-io, pretty, stylish-haskell, test-framework
@@ -100059,17 +100849,17 @@ self: {
      }:
      mkDerivation {
        pname = "hfmt";
-       version = "0.2.0";
-       sha256 = "1d62kby9mzld7lnfvrvhkri8lf2wgijb972wzrarbcbnkahhjnps";
+       version = "0.2.1";
+       sha256 = "06g3l0qbj1bdrxis9ryl3cgmhs129l1lfiah5kpn0xbv1h3p3id5";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
-         base bytestring Cabal conduit-combinators Diff directory exceptions
-         filepath haskell-src-exts hindent hlint HUnit path path-io pretty
-         stylish-haskell text transformers yaml
+         base bytestring Cabal conduit conduit-combinators Diff directory
+         exceptions filepath haskell-src-exts hindent hlint HUnit path
+         path-io pretty stylish-haskell text transformers yaml
        ];
        executableHaskellDepends = [
-         ansi-wl-pprint base conduit-combinators directory
+         ansi-wl-pprint base conduit conduit-combinators directory
          optparse-applicative
        ];
        testHaskellDepends = [
@@ -100153,13 +100943,13 @@ self: {
 
   "hfsevents" = callPackage
     ({ mkDerivation, base, bytestring, cereal, Cocoa, CoreServices, mtl
-     , text, unix
+     , text
      }:
      mkDerivation {
        pname = "hfsevents";
        version = "0.1.6";
        sha256 = "019zbnvfd866ch49gax0c1c93zv92142saim1hrgypz5lprz7hvl";
-       libraryHaskellDepends = [ base bytestring cereal mtl text unix ];
+       libraryHaskellDepends = [ base bytestring cereal mtl text ];
        librarySystemDepends = [ Cocoa ];
        libraryToolDepends = [ CoreServices ];
        homepage = "http://github.com/luite/hfsevents";
@@ -100530,7 +101320,6 @@ self: {
        libraryHaskellDepends = [ base transformers ];
        librarySystemDepends = [ grib_api ];
        libraryToolDepends = [ c2hs ];
-       executableHaskellDepends = [ base ];
        testHaskellDepends = [ base directory hspec ];
        homepage = "https://github.com/mjakob/hgrib";
        description = "Unofficial bindings for GRIB API";
@@ -101002,16 +101791,13 @@ self: {
        libraryHaskellDepends = [
          base blaze-html bytestring filepath mtl pcre-light text
        ];
-       executableHaskellDepends = [
-         base blaze-html bytestring filepath mtl pcre-light text
-       ];
        description = "source code highlighting";
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
   "highlighter2" = callPackage
-    ({ mkDerivation, base, blaze-html, blaze-markup, bytestring
-     , containers, filepath, mtl, pcre-light, text
+    ({ mkDerivation, base, blaze-html, bytestring, containers, filepath
+     , mtl, pcre-light, text
      }:
      mkDerivation {
        pname = "highlighter2";
@@ -101022,10 +101808,6 @@ self: {
        libraryHaskellDepends = [
          base blaze-html bytestring containers filepath mtl pcre-light text
        ];
-       executableHaskellDepends = [
-         base blaze-html blaze-markup bytestring containers filepath mtl
-         pcre-light text
-       ];
        description = "source code highlighting";
        license = stdenv.lib.licenses.bsd3;
      }) {};
@@ -101046,7 +101828,6 @@ self: {
          base blaze-html bytestring containers mtl parsec pcre-light
          utf8-string
        ];
-       executableHaskellDepends = [ base blaze-html containers filepath ];
        testHaskellDepends = [
          base blaze-html containers Diff directory filepath process
        ];
@@ -101977,8 +102758,8 @@ self: {
 
   "hlatex" = callPackage
     ({ mkDerivation, base, base-unicode-symbols, containers, derive
-     , directory, filepath, frquotes, mtl, process, template-haskell
-     , transformers, uniplate, utf8-string
+     , directory, filepath, mtl, process, template-haskell, transformers
+     , uniplate, utf8-string
      }:
      mkDerivation {
        pname = "hlatex";
@@ -101990,9 +102771,6 @@ self: {
          base base-unicode-symbols containers derive directory filepath mtl
          process template-haskell transformers uniplate utf8-string
        ];
-       executableHaskellDepends = [
-         base base-unicode-symbols containers frquotes mtl transformers
-       ];
        description = "A library to build valid LaTeX files";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -102186,8 +102964,8 @@ self: {
        pname = "hledger-iadd";
        version = "1.3.1";
        sha256 = "0z7f9bm7xkq8a9kbhf3bd6fxhfaab08ddgghpbg5z460l4lhcczv";
-       revision = "1";
-       editedCabalFile = "1kwncys0n2xbvbq6a5rgfxg955726xk8av6v9221qx8zpndf2di4";
+       revision = "2";
+       editedCabalFile = "03cc91bzxmk3hffkmda3w87rgwarpdjbs1kwafix65avhw03g7ga";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -102454,8 +103232,8 @@ self: {
      }:
      mkDerivation {
        pname = "hlint";
-       version = "2.0.15";
-       sha256 = "0k9y9dj9sq8rwkjnca4s6wv0ncba536lmcpq10vpyvy47x5dzs2d";
+       version = "2.1";
+       sha256 = "13chm0dhh1fn2iy3flnh7ahc3yzh8q0v10qxwd1739sywhykayg9";
        isLibrary = true;
        isExecutable = true;
        enableSeparateDataOutput = true;
@@ -102554,7 +103332,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base stm transformers unix X11 ];
-       executableHaskellDepends = [ base stm transformers unix X11 ];
        homepage = "https://github.com/hpdeifel/hlwm-haskell";
        description = "Bindings to the herbstluftwm window manager";
        license = stdenv.lib.licenses.bsd2;
@@ -102631,6 +103408,30 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {inherit (pkgs) openblasCompat;};
 
+  "hmatrix-backprop" = callPackage
+    ({ mkDerivation, ANum, backprop, base, finite-typelits
+     , ghc-typelits-knownnat, ghc-typelits-natnormalise, hedgehog
+     , hmatrix, hmatrix-vector-sized, microlens, microlens-platform
+     , vector, vector-sized
+     }:
+     mkDerivation {
+       pname = "hmatrix-backprop";
+       version = "0.1.0.0";
+       sha256 = "088spv7149788iwda2pyf6fc9i40vq4dfziqldgxjrnngxw9z8iv";
+       libraryHaskellDepends = [
+         ANum backprop base ghc-typelits-knownnat ghc-typelits-natnormalise
+         hmatrix hmatrix-vector-sized microlens vector vector-sized
+       ];
+       testHaskellDepends = [
+         backprop base finite-typelits hedgehog hmatrix hmatrix-vector-sized
+         microlens microlens-platform vector-sized
+       ];
+       homepage = "https://github.com/mstksg/hmatrix-backprop#readme";
+       description = "hmatrix operations lifted for backprop";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "hmatrix-banded" = callPackage
     ({ mkDerivation, base, hmatrix, liblapack, transformers }:
      mkDerivation {
@@ -102872,6 +103673,23 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "hmatrix-vector-sized" = callPackage
+    ({ mkDerivation, base, ghc-typelits-knownnat, hedgehog, hmatrix
+     , vector, vector-sized
+     }:
+     mkDerivation {
+       pname = "hmatrix-vector-sized";
+       version = "0.1.1.0";
+       sha256 = "079vq2n3w3f32dnlyxa8kn6dif0dd6nr8n1g9lnfw0d339cxqklb";
+       libraryHaskellDepends = [ base hmatrix vector vector-sized ];
+       testHaskellDepends = [
+         base ghc-typelits-knownnat hedgehog hmatrix vector vector-sized
+       ];
+       homepage = "https://github.com/mstksg/hmatrix-vector-sized#readme";
+       description = "Conversions between hmatrix and vector-sized types";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "hmeap" = callPackage
     ({ mkDerivation, array, base, bytestring, bytestring-lexing
      , delimited-text, parsec
@@ -103327,9 +104145,9 @@ self: {
      }) {};
 
   "hoauth2" = callPackage
-    ({ mkDerivation, aeson, base, bytestring, containers, exceptions
-     , http-conduit, http-types, microlens, text, unordered-containers
-     , uri-bytestring, uri-bytestring-aeson, wai, warp
+    ({ mkDerivation, aeson, base, bytestring, exceptions, http-conduit
+     , http-types, microlens, text, unordered-containers, uri-bytestring
+     , uri-bytestring-aeson
      }:
      mkDerivation {
        pname = "hoauth2";
@@ -103341,34 +104159,26 @@ self: {
          aeson base bytestring exceptions http-conduit http-types microlens
          text unordered-containers uri-bytestring uri-bytestring-aeson
        ];
-       executableHaskellDepends = [
-         aeson base bytestring containers http-conduit http-types text
-         uri-bytestring wai warp
-       ];
        homepage = "https://github.com/freizl/hoauth2";
        description = "Haskell OAuth2 authentication client";
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "hoauth2_1_6_2" = callPackage
-    ({ mkDerivation, aeson, base, bytestring, containers, exceptions
-     , http-conduit, http-types, microlens, text, unordered-containers
-     , uri-bytestring, uri-bytestring-aeson, wai, warp
+  "hoauth2_1_6_3" = callPackage
+    ({ mkDerivation, aeson, base, bytestring, exceptions, http-conduit
+     , http-types, microlens, text, unordered-containers, uri-bytestring
+     , uri-bytestring-aeson
      }:
      mkDerivation {
        pname = "hoauth2";
-       version = "1.6.2";
-       sha256 = "185yia9mdjhmhian83rrd0hm3wjpja7hawnyvzq25rnhh2g4l2ay";
+       version = "1.6.3";
+       sha256 = "165xaw7k8ii9g8ig0ifvs8c76q2s760n8g0hxyhhprz1gj586913";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
          aeson base bytestring exceptions http-conduit http-types microlens
          text unordered-containers uri-bytestring uri-bytestring-aeson
        ];
-       executableHaskellDepends = [
-         aeson base bytestring containers http-conduit http-types text
-         uri-bytestring wai warp
-       ];
        homepage = "https://github.com/freizl/hoauth2";
        description = "Haskell OAuth2 authentication client";
        license = stdenv.lib.licenses.bsd3;
@@ -103474,10 +104284,11 @@ self: {
      }:
      mkDerivation {
        pname = "hocker";
-       version = "1.0.4";
-       sha256 = "1lf8m6cd54vc436krl3j4kanmnd86r4ri45a1qp7y4qqlpplcnpf";
+       version = "1.0.5";
+       sha256 = "0xv22kiw44y72asrnk027h9gxpfhjzgdm8sbcy70s4ipn8n62hha";
        isLibrary = true;
        isExecutable = true;
+       enableSeparateDataOutput = true;
        libraryHaskellDepends = [
          aeson aeson-pretty ansi-wl-pprint async base bytestring
          concurrentoutput containers cryptonite data-fix deepseq directory
@@ -104809,19 +105620,19 @@ self: {
      }) {};
 
   "hourglass" = callPackage
-    ({ mkDerivation, base, bytestring, criterion, deepseq, mtl
-     , old-locale, tasty, tasty-hunit, tasty-quickcheck, time
+    ({ mkDerivation, base, bytestring, deepseq, gauge, mtl, old-locale
+     , tasty, tasty-hunit, tasty-quickcheck, time
      }:
      mkDerivation {
        pname = "hourglass";
-       version = "0.2.10";
-       sha256 = "104d1yd84hclprg740nkz60vx589mnm094zriw6zczbgg8nkclym";
+       version = "0.2.11";
+       sha256 = "0lag9sgj7ndrbfmab6jhszlv413agg0zzaj5r9f2fmf07wqbp9hq";
        libraryHaskellDepends = [ base deepseq ];
        testHaskellDepends = [
          base deepseq mtl old-locale tasty tasty-hunit tasty-quickcheck time
        ];
        benchmarkHaskellDepends = [
-         base bytestring criterion deepseq mtl old-locale time
+         base bytestring deepseq gauge mtl old-locale time
        ];
        homepage = "https://github.com/vincenthz/hs-hourglass";
        description = "simple performant time related library";
@@ -105018,7 +105829,7 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "hpack_0_24_0" = callPackage
+  "hpack_0_27_0" = callPackage
     ({ mkDerivation, aeson, base, bifunctors, bytestring, Cabal
      , containers, cryptonite, deepseq, directory, filepath, Glob, hspec
      , http-client, http-client-tls, http-types, HUnit, interpolate
@@ -105027,8 +105838,8 @@ self: {
      }:
      mkDerivation {
        pname = "hpack";
-       version = "0.24.0";
-       sha256 = "074pzminhv59br5w2xy3d8mhi2cwj5m10lwlqkq990w0gfcfhy46";
+       version = "0.27.0";
+       sha256 = "1vrbf2b5bin9sdm80bj0jkcwc2d9zh29jh4qjhfvcpk4ggbl8iym";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -105097,8 +105908,8 @@ self: {
        pname = "hpack-dhall";
        version = "0.1.0";
        sha256 = "1yz1ypq88lmxdz9728w8q0ag1whwzlkwcdvx8dhyav5k3ifgp2x0";
-       revision = "1";
-       editedCabalFile = "1432yrvrd0dlnn4lzyb4s5akvb85mx0anbxd1j9b4l1zl37d2bmn";
+       revision = "3";
+       editedCabalFile = "02pvzwqrs163mgxdydgv6pa1gq75xav68kpjycrxgdbpag6s9ynv";
        isLibrary = false;
        isExecutable = true;
        executableHaskellDepends = [
@@ -105111,6 +105922,7 @@ self: {
        homepage = "https://github.com/sol/hpack-dhall#readme";
        description = "Dhall support for Hpack";
        license = stdenv.lib.licenses.publicDomain;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "hpaco" = callPackage
@@ -105366,45 +106178,14 @@ self: {
 
   "hpio" = callPackage
     ({ mkDerivation, async, base, bytestring, containers, directory
-     , doctest, exceptions, filepath, hlint, hspec, monad-control
-     , monad-logger, mtl, optparse-applicative, protolude, QuickCheck
-     , text, transformers, transformers-base, unix, unix-bytestring
-     }:
-     mkDerivation {
-       pname = "hpio";
-       version = "0.9.0.3";
-       sha256 = "0cz7dxxxxfr142gr3hrq1k1x8axdgvyw7bsjsd1v9spka2i03rcd";
-       isLibrary = true;
-       isExecutable = true;
-       libraryHaskellDepends = [
-         base bytestring containers directory exceptions filepath
-         monad-control monad-logger mtl protolude QuickCheck text
-         transformers transformers-base unix unix-bytestring
-       ];
-       executableHaskellDepends = [
-         async base exceptions mtl optparse-applicative protolude text
-         transformers
-       ];
-       testHaskellDepends = [
-         base containers directory doctest exceptions filepath hlint hspec
-         protolude QuickCheck
-       ];
-       homepage = "https://github.com/quixoftic/hpio#readme";
-       description = "Monads for GPIO in Haskell";
-       license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
-     }) {};
-
-  "hpio_0_9_0_4" = callPackage
-    ({ mkDerivation, async, base, bytestring, containers, directory
      , doctest, exceptions, filepath, hspec, monad-control, monad-logger
      , mtl, optparse-applicative, protolude, QuickCheck, text
      , transformers, transformers-base, unix, unix-bytestring
      }:
      mkDerivation {
        pname = "hpio";
-       version = "0.9.0.4";
-       sha256 = "18j60xiwh18s01bbapi95h8g6ixr9brqh375qlhg600cgf0yzirx";
+       version = "0.9.0.5";
+       sha256 = "0k1n2la7c5ld13nr0j2hc1ia2i9gy4aacs2cna4rkmcnyamgg38i";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -105587,6 +106368,35 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "hprotoc_2_4_7" = callPackage
+    ({ mkDerivation, alex, array, base, binary, bytestring, containers
+     , directory, filepath, haskell-src-exts, mtl, parsec
+     , protocol-buffers, protocol-buffers-descriptor, utf8-string
+     }:
+     mkDerivation {
+       pname = "hprotoc";
+       version = "2.4.7";
+       sha256 = "0rbifp2n2vb2bhk8wgdkmp0q2dqv7vlcwsqgpl8b7xhkfn706ps5";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         array base binary bytestring containers directory filepath
+         haskell-src-exts mtl parsec protocol-buffers
+         protocol-buffers-descriptor utf8-string
+       ];
+       libraryToolDepends = [ alex ];
+       executableHaskellDepends = [
+         array base binary bytestring containers directory filepath
+         haskell-src-exts mtl parsec protocol-buffers
+         protocol-buffers-descriptor utf8-string
+       ];
+       executableToolDepends = [ alex ];
+       homepage = "https://github.com/k-bx/protocol-buffers";
+       description = "Parse Google Protocol Buffer specifications";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "hprotoc-fork" = callPackage
     ({ mkDerivation, alex, array, base, binary, bytestring, containers
      , directory, filepath, haskell-src-exts, mtl, parsec
@@ -106408,6 +107218,25 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "hs-rs-notify" = callPackage
+    ({ mkDerivation, base, filepath, notifier, process, protolude, text
+     , unix
+     }:
+     mkDerivation {
+       pname = "hs-rs-notify";
+       version = "0.1.0.3";
+       sha256 = "0nrhks103kcj8m0f20gp3bgg21pvi4v1vaif275pra4bv0bzl3nh";
+       libraryHaskellDepends = [
+         base filepath process protolude text unix
+       ];
+       librarySystemDepends = [ notifier ];
+       testHaskellDepends = [ base protolude ];
+       homepage = "https://github.com/NoRedInk/hs-rs-notify#readme";
+       description = "Experimental! Wraps this awesome rust library so you can use it in haskell. https://docs.rs/crate/notify";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {notifier = null;};
+
   "hs-scrape" = callPackage
     ({ mkDerivation, base, bytestring, containers, data-default
      , exceptions, hspec, html-conduit, lens, retry, safe, tasty
@@ -106431,8 +107260,7 @@ self: {
      }) {};
 
   "hs-server-starter" = callPackage
-    ({ mkDerivation, base, directory, http-types, HUnit, network
-     , temporary, unix, wai, warp
+    ({ mkDerivation, base, directory, HUnit, network, temporary, unix
      }:
      mkDerivation {
        pname = "hs-server-starter";
@@ -106441,7 +107269,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base directory network ];
-       executableHaskellDepends = [ base http-types network wai warp ];
        testHaskellDepends = [ base HUnit network temporary unix ];
        homepage = "https://github.com/hiratara/hs-server-starter";
        description = "Write a server supporting Server::Starter's protocol in Haskell";
@@ -106558,27 +107385,29 @@ self: {
 
   "hs2ats" = callPackage
     ({ mkDerivation, ansi-wl-pprint, base, cases, composition-prelude
-     , criterion, deepseq, haskell-src-exts, hspec, hspec-dirstream
-     , language-ats, lens, optparse-generic, system-filepath, text
+     , cpphs, criterion, deepseq, haskell-src-exts, hspec
+     , hspec-dirstream, language-ats, lens, optparse-generic
+     , system-filepath, text
      }:
      mkDerivation {
        pname = "hs2ats";
-       version = "0.2.0.4";
-       sha256 = "0yji8np53qgwfhmamfkmc4bbvkivwhrkjrwr9aqly9gyadbsw89m";
+       version = "0.2.1.5";
+       sha256 = "0jxyj9pggs4m2ypw12z5xjrc5r0cq5gxi3dllbmvvablxlwzfkv1";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
-         ansi-wl-pprint base cases composition-prelude deepseq
+         ansi-wl-pprint base cases composition-prelude cpphs deepseq
          haskell-src-exts language-ats lens optparse-generic text
        ];
        executableHaskellDepends = [ base ];
        testHaskellDepends = [
-         base hspec hspec-dirstream language-ats system-filepath
+         base hspec hspec-dirstream system-filepath
        ];
        benchmarkHaskellDepends = [ base criterion ];
        homepage = "https://github.com/vmchale/hs2ats#readme";
        description = "Create ATS types from Haskell types";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "hs2bf" = callPackage
@@ -106965,10 +107794,9 @@ self: {
 
   "hsc3-graphs" = callPackage
     ({ mkDerivation, array, base, binary, bytestring, cairo, containers
-     , data-default, directory, filepath, hashable, hls, hmt, hosc, hps
-     , hsc3, hsc3-cairo, hsc3-lang, hsc3-sf, hsc3-unsafe, hsc3-utils
-     , hsharc, MonadRandom, primes, process, random, random-shuffle
-     , sc3-rdu, she, split
+     , data-default, directory, filepath, hls, hmt, hosc, hps, hsc3
+     , hsc3-cairo, hsc3-lang, hsc3-sf, hsc3-unsafe, hsc3-utils, hsharc
+     , MonadRandom, primes, random, random-shuffle, sc3-rdu, she, split
      }:
      mkDerivation {
        pname = "hsc3-graphs";
@@ -106983,12 +107811,7 @@ self: {
          hsc3-sf hsc3-unsafe hsc3-utils hsharc MonadRandom primes random
          random-shuffle sc3-rdu she split
        ];
-       executableHaskellDepends = [
-         array base binary bytestring cairo containers directory filepath
-         hashable hls hmt hosc hps hsc3 hsc3-cairo hsc3-lang hsc3-sf
-         hsc3-unsafe hsharc MonadRandom primes process random random-shuffle
-         sc3-rdu split
-       ];
+       executableHaskellDepends = [ base ];
        homepage = "http://rd.slavepianos.org/t/hsc3-graphs";
        description = "Haskell SuperCollider Graphs";
        license = "GPL";
@@ -107072,7 +107895,6 @@ self: {
          base bytestring containers data-default directory filepath hosc
          hsc3 process time time-compat transformers
        ];
-       executableHaskellDepends = [ base data-default hosc hsc3 ];
        homepage = "https://github.com/kaoskorobase/hsc3-process";
        description = "Create and control scsynth processes";
        license = "GPL";
@@ -107116,7 +107938,7 @@ self: {
      , failure, hashtables, hosc, hsc3, hsc3-process, lifted-base
      , ListZipper, monad-control, QuickCheck, random, resourcet
      , test-framework, test-framework-quickcheck2, transformers
-     , transformers-base, unix
+     , transformers-base
      }:
      mkDerivation {
        pname = "hsc3-server";
@@ -107129,9 +107951,6 @@ self: {
          hosc hsc3 hsc3-process lifted-base ListZipper monad-control
          resourcet transformers transformers-base
        ];
-       executableHaskellDepends = [
-         base hosc hsc3 random transformers unix
-       ];
        testHaskellDepends = [
          base failure QuickCheck random test-framework
          test-framework-quickcheck2 transformers
@@ -107440,8 +108259,8 @@ self: {
      }:
      mkDerivation {
        pname = "hsdev";
-       version = "0.3.1.1";
-       sha256 = "1bj9zhkikspf73xha8vcx3ads5fp33f1ail0fns9iyra5zl0g612";
+       version = "0.3.1.2";
+       sha256 = "1abwv4987xznfv6sx8sfhk04f4s7dpjvgzwzjzi8rwxibm8az09p";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -107504,23 +108323,6 @@ self: {
     ({ mkDerivation, adns, base, containers, network }:
      mkDerivation {
        pname = "hsdns";
-       version = "1.7";
-       sha256 = "1lsw422k64b8m7s98j1i6qxll1kyzpv3bb0a2wwf7lghw74hm5j8";
-       isLibrary = true;
-       isExecutable = true;
-       libraryHaskellDepends = [ base containers network ];
-       librarySystemDepends = [ adns ];
-       executableHaskellDepends = [ base network ];
-       homepage = "http://github.com/peti/hsdns";
-       description = "Asynchronous DNS Resolver";
-       license = stdenv.lib.licenses.lgpl3;
-       maintainers = with stdenv.lib.maintainers; [ peti ];
-     }) {inherit (pkgs) adns;};
-
-  "hsdns_1_7_1" = callPackage
-    ({ mkDerivation, adns, base, containers, network }:
-     mkDerivation {
-       pname = "hsdns";
        version = "1.7.1";
        sha256 = "0i50p31zxsrkx9hv3mqcl2042lf922b1fsswmd99d66ybkl01kag";
        isLibrary = true;
@@ -107530,7 +108332,6 @@ self: {
        homepage = "http://github.com/peti/hsdns";
        description = "Asynchronous DNS Resolver";
        license = stdenv.lib.licenses.lgpl3;
-       hydraPlatforms = stdenv.lib.platforms.none;
        maintainers = with stdenv.lib.maintainers; [ peti ];
      }) {inherit (pkgs) adns;};
 
@@ -107943,7 +108744,7 @@ self: {
      }) {};
 
   "hslogger" = callPackage
-    ({ mkDerivation, base, containers, directory, HUnit, mtl, network
+    ({ mkDerivation, base, containers, directory, mtl, network
      , old-locale, process, time, unix
      }:
      mkDerivation {
@@ -107953,7 +108754,6 @@ self: {
        libraryHaskellDepends = [
          base containers directory mtl network old-locale process time unix
        ];
-       testHaskellDepends = [ base HUnit ];
        homepage = "http://software.complete.org/hslogger";
        description = "Versatile logging framework";
        license = stdenv.lib.licenses.bsd3;
@@ -108098,6 +108898,7 @@ self: {
        testHaskellDepends = [ aeson base bytestring colour containers ];
        description = "HSLuv conversion utility";
        license = stdenv.lib.licenses.gpl3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "hsmagick" = callPackage
@@ -108146,6 +108947,25 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "hsmodetweaks" = callPackage
+    ({ mkDerivation, base, containers, directory, hpack, protolude
+     , text
+     }:
+     mkDerivation {
+       pname = "hsmodetweaks";
+       version = "0.1.0.1";
+       sha256 = "1nwmfd6wvwis58z97amgzix42mcqj5nsj915593w2cw7j5sv5y17";
+       isLibrary = false;
+       isExecutable = true;
+       executableHaskellDepends = [
+         base containers directory hpack protolude text
+       ];
+       homepage = "https://github.com/mwotton/scriptable/#hsmodetweaks";
+       description = "Tool for generating .dir-locals.el for intero";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "hsmtpclient" = callPackage
     ({ mkDerivation, array, base, directory, network, old-time }:
      mkDerivation {
@@ -108450,15 +109270,15 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "hspec_2_4_7" = callPackage
+  "hspec_2_4_8" = callPackage
     ({ mkDerivation, base, call-stack, directory, hspec-core
      , hspec-discover, hspec-expectations, hspec-meta, HUnit, QuickCheck
      , stringbuilder, transformers
      }:
      mkDerivation {
        pname = "hspec";
-       version = "2.4.7";
-       sha256 = "1jvf7x43gkch4b8nxqdascqlh4rh2d1qvl44skwqkz0gw154ldan";
+       version = "2.4.8";
+       sha256 = "18pddkfz661b1nr1nziq8cnmlzxiqzzmrcrk3iwn476vi3bf1m4l";
        libraryHaskellDepends = [
          base call-stack hspec-core hspec-discover hspec-expectations HUnit
          QuickCheck transformers
@@ -108549,25 +109369,25 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "hspec-core_2_4_7" = callPackage
-    ({ mkDerivation, ansi-terminal, array, async, base, call-stack
-     , deepseq, directory, filepath, hspec-expectations, hspec-meta
-     , HUnit, process, QuickCheck, quickcheck-io, random, setenv
-     , silently, temporary, tf-random, time, transformers
+  "hspec-core_2_4_8" = callPackage
+    ({ mkDerivation, ansi-terminal, array, base, call-stack, deepseq
+     , directory, filepath, hspec-expectations, hspec-meta, HUnit
+     , process, QuickCheck, quickcheck-io, random, setenv, silently, stm
+     , temporary, tf-random, time, transformers
      }:
      mkDerivation {
        pname = "hspec-core";
-       version = "2.4.7";
-       sha256 = "0syjbx3s62shwddp75qj0nfwmfjn0yflja4bh23x161xpx1g0igx";
+       version = "2.4.8";
+       sha256 = "02zr6n7mqdncvf1braf38zjdplaxrkg11x9k8717k4yg57585ji4";
        libraryHaskellDepends = [
-         ansi-terminal array async base call-stack deepseq directory
-         filepath hspec-expectations HUnit QuickCheck quickcheck-io random
-         setenv tf-random time transformers
+         ansi-terminal array base call-stack deepseq directory filepath
+         hspec-expectations HUnit QuickCheck quickcheck-io random setenv stm
+         tf-random time transformers
        ];
        testHaskellDepends = [
-         ansi-terminal array async base call-stack deepseq directory
-         filepath hspec-expectations hspec-meta HUnit process QuickCheck
-         quickcheck-io random setenv silently temporary tf-random time
+         ansi-terminal array base call-stack deepseq directory filepath
+         hspec-expectations hspec-meta HUnit process QuickCheck
+         quickcheck-io random setenv silently stm temporary tf-random time
          transformers
        ];
        testTarget = "--test-option=--skip --test-option='Test.Hspec.Core.Runner.hspecResult runs specs in parallel'";
@@ -108612,13 +109432,13 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "hspec-discover_2_4_7" = callPackage
+  "hspec-discover_2_4_8" = callPackage
     ({ mkDerivation, base, directory, filepath, hspec-meta, QuickCheck
      }:
      mkDerivation {
        pname = "hspec-discover";
-       version = "2.4.7";
-       sha256 = "1cgj6c6f5vpn36jg2j7v80nr87x1dsf7qyvxvjw8qimjdxrcx0ba";
+       version = "2.4.8";
+       sha256 = "0llwdfpjgfpi7dr8caw0fldb9maqznmqh4awkvx72bz538gqmlka";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base directory filepath ];
@@ -109982,25 +110802,6 @@ self: {
      }:
      mkDerivation {
        pname = "hsx2hs";
-       version = "0.14.1.1";
-       sha256 = "0hymdradb2vsx7gpdwrlmkv1qg4p2r5l6pfiqc4ijyn152jrgr7b";
-       isLibrary = true;
-       isExecutable = true;
-       libraryHaskellDepends = [
-         base bytestring haskell-src-exts haskell-src-meta mtl
-         template-haskell utf8-string
-       ];
-       homepage = "https://github.com/seereason/hsx2hs";
-       description = "HSX (Haskell Source with XML) allows literal XML syntax in Haskell source code";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "hsx2hs_0_14_1_2" = callPackage
-    ({ mkDerivation, base, bytestring, haskell-src-exts
-     , haskell-src-meta, mtl, template-haskell, utf8-string
-     }:
-     mkDerivation {
-       pname = "hsx2hs";
        version = "0.14.1.2";
        sha256 = "06j2nc2yg8a8pp3c2ayxrm76fj2w2w5d2ilq91hvwwb1ikrklg5b";
        isLibrary = true;
@@ -110012,7 +110813,6 @@ self: {
        homepage = "https://github.com/seereason/hsx2hs";
        description = "HSX (Haskell Source with XML) allows literal XML syntax in Haskell source code";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "hsyscall" = callPackage
@@ -110314,6 +111114,7 @@ self: {
        homepage = "https://github.com/nikita-volkov/html-entities";
        description = "A codec library for HTML-escaped text and HTML-entities";
        license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "html-entity-map" = callPackage
@@ -110403,8 +111204,8 @@ self: {
      }:
      mkDerivation {
        pname = "html-tokenizer";
-       version = "0.6.3";
-       sha256 = "0vwjqv2fqz63ip6q2j62f54phcyrdwghsbs4c4ziz7dh35nh4ahx";
+       version = "0.6.4";
+       sha256 = "1ws1y05qxyz5zx3y7lwj10giiviqzlka9h2bqj4y3wpzjdbrd4rk";
        libraryHaskellDepends = [
          attoparsec base base-prelude html-entities semigroups text
          text-builder vector vector-builder
@@ -110649,34 +111450,6 @@ self: {
   "http-api-data" = callPackage
     ({ mkDerivation, attoparsec, attoparsec-iso8601, base, bytestring
      , Cabal, cabal-doctest, containers, directory, doctest, filepath
-     , hashable, hspec, http-types, HUnit, QuickCheck
-     , quickcheck-instances, text, time, time-locale-compat
-     , unordered-containers, uri-bytestring, uuid, uuid-types
-     }:
-     mkDerivation {
-       pname = "http-api-data";
-       version = "0.3.7.1";
-       sha256 = "1zbmf0kkfsw7pfznisi205gh7jd284gfarxsyiavd2iw26akwqwc";
-       revision = "1";
-       editedCabalFile = "0g57k71bssf81yba6xf9fcxlys8m5ax5kvrs4gvckahf5ihdxds6";
-       setupHaskellDepends = [ base Cabal cabal-doctest ];
-       libraryHaskellDepends = [
-         attoparsec attoparsec-iso8601 base bytestring containers hashable
-         http-types text time time-locale-compat unordered-containers
-         uri-bytestring uuid-types
-       ];
-       testHaskellDepends = [
-         base bytestring directory doctest filepath hspec HUnit QuickCheck
-         quickcheck-instances text time unordered-containers uuid
-       ];
-       homepage = "http://github.com/fizruk/http-api-data";
-       description = "Converting to/from HTTP API data like URL pieces, headers and query parameters";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "http-api-data_0_3_7_2" = callPackage
-    ({ mkDerivation, attoparsec, attoparsec-iso8601, base, bytestring
-     , Cabal, cabal-doctest, containers, directory, doctest, filepath
      , hashable, hspec, hspec-discover, http-types, HUnit, QuickCheck
      , quickcheck-instances, text, time, time-locale-compat
      , unordered-containers, uri-bytestring, uuid, uuid-types
@@ -110699,7 +111472,6 @@ self: {
        homepage = "http://github.com/fizruk/http-api-data";
        description = "Converting to/from HTTP API data like URL pieces, headers and query parameters";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "http-attoparsec" = callPackage
@@ -110724,35 +111496,6 @@ self: {
      }:
      mkDerivation {
        pname = "http-client";
-       version = "0.5.9";
-       sha256 = "0bccpvinzc7z5v83grjzvd3g3kdz2q5h2206l7x9jh4bvz9prblf";
-       libraryHaskellDepends = [
-         array base base64-bytestring blaze-builder bytestring
-         case-insensitive containers cookie deepseq exceptions filepath
-         ghc-prim http-types mime-types network network-uri random stm
-         streaming-commons text time transformers
-       ];
-       testHaskellDepends = [
-         async base base64-bytestring blaze-builder bytestring
-         case-insensitive containers deepseq directory hspec http-types
-         monad-control network network-uri streaming-commons text time
-         transformers zlib
-       ];
-       doCheck = false;
-       homepage = "https://github.com/snoyberg/http-client";
-       description = "An HTTP client engine";
-       license = stdenv.lib.licenses.mit;
-     }) {};
-
-  "http-client_0_5_10" = callPackage
-    ({ mkDerivation, array, async, base, base64-bytestring
-     , blaze-builder, bytestring, case-insensitive, containers, cookie
-     , deepseq, directory, exceptions, filepath, ghc-prim, hspec
-     , http-types, mime-types, monad-control, network, network-uri
-     , random, stm, streaming-commons, text, time, transformers, zlib
-     }:
-     mkDerivation {
-       pname = "http-client";
        version = "0.5.10";
        sha256 = "1hmshs97smigqy334rfkgv3vri5fas3cj8zz2gqlby9jsrp6kygm";
        libraryHaskellDepends = [
@@ -110771,7 +111514,6 @@ self: {
        homepage = "https://github.com/snoyberg/http-client";
        description = "An HTTP client engine";
        license = stdenv.lib.licenses.mit;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "http-client-auth" = callPackage
@@ -110926,37 +111668,14 @@ self: {
 
   "http-client-tls" = callPackage
     ({ mkDerivation, base, bytestring, case-insensitive, connection
-     , containers, criterion, cryptonite, data-default-class, exceptions
-     , hspec, http-client, http-types, memory, network, network-uri
-     , text, tls, transformers
-     }:
-     mkDerivation {
-       pname = "http-client-tls";
-       version = "0.3.5.1";
-       sha256 = "0n4mi8z77qaggfyq17z79cl304nf1f4h6gag60v4wjwghvmj7yn1";
-       libraryHaskellDepends = [
-         base bytestring case-insensitive connection containers cryptonite
-         data-default-class exceptions http-client http-types memory network
-         network-uri text tls transformers
-       ];
-       testHaskellDepends = [ base hspec http-client http-types ];
-       benchmarkHaskellDepends = [ base criterion http-client ];
-       doCheck = false;
-       homepage = "https://github.com/snoyberg/http-client";
-       description = "http-client backend using the connection package and tls library";
-       license = stdenv.lib.licenses.mit;
-     }) {};
-
-  "http-client-tls_0_3_5_2" = callPackage
-    ({ mkDerivation, base, bytestring, case-insensitive, connection
      , containers, cryptonite, data-default-class, exceptions, gauge
      , hspec, http-client, http-types, memory, network, network-uri
      , text, tls, transformers
      }:
      mkDerivation {
        pname = "http-client-tls";
-       version = "0.3.5.2";
-       sha256 = "1ynkwm77sb7djfflnz7v6gfli8zh1sdw4yjqpnb74slrh112ngh9";
+       version = "0.3.5.3";
+       sha256 = "0qj3pcpgbsfsc4m52dz35khhl4hf1i0nmcpa445z82d9567vy6j7";
        libraryHaskellDepends = [
          base bytestring case-insensitive connection containers cryptonite
          data-default-class exceptions http-client http-types memory network
@@ -110970,7 +111689,6 @@ self: {
        homepage = "https://github.com/snoyberg/http-client";
        description = "http-client backend using the connection package and tls library";
        license = stdenv.lib.licenses.mit;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "http-common" = callPackage
@@ -111282,8 +112000,8 @@ self: {
      }:
      mkDerivation {
        pname = "http-media";
-       version = "0.7.1.1";
-       sha256 = "0k58368im14jwsd4wpyw9kl166zbi14ccl3adjigx8yf8k61n7zz";
+       version = "0.7.1.2";
+       sha256 = "01vvrd6yb2aykha7y1c13ylnkyws2wy68vqbdb7kmbzwbdxdb4zy";
        libraryHaskellDepends = [
          base bytestring case-insensitive containers utf8-string
        ];
@@ -111298,18 +112016,18 @@ self: {
 
   "http-monad" = callPackage
     ({ mkDerivation, base, bytestring, containers, explicit-exception
-     , HTTP, lazyio, network, network-uri, parsec, transformers
-     , utility-ht
+     , HTTP, lazyio, network, network-uri, parsec, semigroups
+     , transformers, utility-ht
      }:
      mkDerivation {
        pname = "http-monad";
-       version = "0.1.1.1";
-       sha256 = "0mb34zkixyrp0bmw1q8s8g6rprq6k7wq946n8as6dkwm9aya0gmd";
+       version = "0.1.1.2";
+       sha256 = "0s2ajy2iwi7k5zrs6asp5ncyy06jnphp4ncc130cg2kpnf32yyfz";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
          base bytestring containers explicit-exception HTTP lazyio network
-         network-uri parsec transformers utility-ht
+         network-uri parsec semigroups transformers utility-ht
        ];
        description = "Monad abstraction for HTTP allowing lazy transfer and non-I/O simulation";
        license = stdenv.lib.licenses.bsd3;
@@ -111691,11 +112409,6 @@ self: {
          array base bytestring bytestring-builder case-insensitive
          containers psqueues stm
        ];
-       executableHaskellDepends = [
-         aeson aeson-pretty array base bytestring bytestring-builder
-         case-insensitive containers directory filepath hex text
-         unordered-containers vector word8
-       ];
        testHaskellDepends = [
          aeson aeson-pretty array base bytestring bytestring-builder
          case-insensitive containers directory doctest filepath Glob hex
@@ -112010,8 +112723,8 @@ self: {
     ({ mkDerivation, base, text }:
      mkDerivation {
        pname = "human-parse";
-       version = "0.1.0.2";
-       sha256 = "1p7r26b3845fbdp2lxv6pqbqrlfzna8qsh7k3b1rkj3qlbw64rym";
+       version = "0.1.0.3";
+       sha256 = "0lr2m5gci1k0x7w1i49cb6nhbnnkym4raaagn916ahf79y05jv7d";
        libraryHaskellDepends = [ base text ];
        homepage = "https://github.com/chris-martin/human";
        description = "A lawless typeclass for parsing text entered by humans";
@@ -112037,8 +112750,8 @@ self: {
     ({ mkDerivation, base, text }:
      mkDerivation {
        pname = "human-text";
-       version = "0.1.0.2";
-       sha256 = "1jq9ksszwiy0bddw5c0zx037ig0gvsc5k030h6znkvmkpcvg096q";
+       version = "0.1.0.3";
+       sha256 = "0v6wrs9mcmiwk9ladjcibw1yqpbbl0y6v9i3ni39v0byby0a2zpa";
        libraryHaskellDepends = [ base text ];
        homepage = "https://github.com/chris-martin/human";
        description = "A lawless typeclass for converting values to human-friendly text";
@@ -112107,12 +112820,12 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "hunit-dejafu_1_0_0_0" = callPackage
+  "hunit-dejafu_1_0_1_0" = callPackage
     ({ mkDerivation, base, dejafu, exceptions, HUnit }:
      mkDerivation {
        pname = "hunit-dejafu";
-       version = "1.0.0.0";
-       sha256 = "1xsfv8pdkmyplggzk0k17j1y10kbjrvb86izsnc9k2w0lmd1j6ji";
+       version = "1.0.1.0";
+       sha256 = "1vnxxyjycbz5xcfyyrl2hi2xkfqdqajlx1jbxvmq3d0w76p3zvdk";
        libraryHaskellDepends = [ base dejafu exceptions HUnit ];
        homepage = "https://github.com/barrucadu/dejafu";
        description = "Deja Fu support for the HUnit test framework";
@@ -112736,11 +113449,6 @@ self: {
          http-client http-types mtl pure-zlib semigroups servant
          servant-client text transformers unordered-containers
        ];
-       executableHaskellDepends = [
-         aeson avro base binary bytestring cache containers errors hashable
-         http-client mtl pure-zlib semigroups servant servant-client text
-         transformers unordered-containers
-       ];
        testHaskellDepends = [
          aeson avro base binary bytestring cache containers errors hashable
          hspec http-client mtl pure-zlib QuickCheck semigroups servant
@@ -112754,13 +113462,13 @@ self: {
 
   "hw-kafka-client" = callPackage
     ({ mkDerivation, base, bifunctors, bytestring, c2hs, containers
-     , either, hspec, monad-loops, rdkafka, regex-posix, temporary
-     , transformers, unix
+     , either, hspec, monad-loops, rdkafka, temporary, transformers
+     , unix
      }:
      mkDerivation {
        pname = "hw-kafka-client";
-       version = "2.3.1";
-       sha256 = "0sjr3xqpx47lwzm6kk1rjinc9k39i9zjm74160ly9i68gnjgx69i";
+       version = "2.3.3";
+       sha256 = "14g0mqwj6fr8sdq62sljzih0a9km1hxqm1zqmr9jv58znmj9f2x1";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -112768,16 +113476,13 @@ self: {
        ];
        librarySystemDepends = [ rdkafka ];
        libraryToolDepends = [ c2hs ];
-       executableHaskellDepends = [
-         base bifunctors bytestring containers temporary transformers unix
-       ];
        testHaskellDepends = [
          base bifunctors bytestring containers either hspec monad-loops
-         regex-posix
        ];
        homepage = "https://github.com/haskell-works/hw-kafka-client";
        description = "Kafka bindings for Haskell";
        license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {inherit (pkgs) rdkafka;};
 
   "hw-kafka-conduit" = callPackage
@@ -112795,9 +113500,6 @@ self: {
          base bifunctors bytestring conduit conduit-extra containers
          exceptions hw-kafka-client mtl resourcet transformers
        ];
-       executableHaskellDepends = [
-         base bifunctors bytestring conduit containers resourcet
-       ];
        testHaskellDepends = [
          base bifunctors bytestring conduit conduit-extra containers extra
          hspec hw-kafka-client mtl QuickCheck resourcet transformers
@@ -112805,6 +113507,7 @@ self: {
        homepage = "https://github.com/haskell-works/hw-kafka-conduit";
        description = "Conduit bindings for hw-kafka-client";
        license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "hw-mquery" = callPackage
@@ -114133,6 +114836,8 @@ self: {
        pname = "hyphenation";
        version = "0.7.1";
        sha256 = "1h5i07v2zlka29dj4zysc47p747j88x6z4zm3zwcr5i8yirm0p52";
+       revision = "1";
+       editedCabalFile = "04kn5pdb1f6yz959qjv3bcbqi3zs88fn6rwxv45m95lx6pzywhln";
        enableSeparateDataOutput = true;
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
@@ -115269,8 +115974,8 @@ self: {
     ({ mkDerivation, base, process }:
      mkDerivation {
        pname = "ihs";
-       version = "0.1.0.1";
-       sha256 = "0q7wa5pgf4ga7pmjwjxacqmdbhqricsv9xkzfrcg314lag8wvdgb";
+       version = "0.1.0.2";
+       sha256 = "0cprv8g7kz07s5954020ac9yfggf3d2wmwp4xa61q4sz5rs7wiwq";
        isLibrary = false;
        isExecutable = true;
        executableHaskellDepends = [ base process ];
@@ -115379,7 +116084,6 @@ self: {
          base bytestring filepath resourcet text transformers vector
        ];
        libraryPkgconfigDepends = [ imagemagick ];
-       executablePkgconfigDepends = [ imagemagick ];
        testHaskellDepends = [
          base bytestring directory filepath lifted-base QuickCheck resourcet
          tasty tasty-hunit text transformers vector
@@ -115419,8 +116123,8 @@ self: {
        pname = "imagesize-conduit";
        version = "1.1";
        sha256 = "06dc0453l7n3g05pg118y4smlzkl6p56zazpi4dr41dkg12pii9i";
-       revision = "1";
-       editedCabalFile = "1gq749v6558zkvvn8iqkd4iqv4giiysxjqb2kncarnhghkkbgbaf";
+       revision = "3";
+       editedCabalFile = "0p4zmizr01pg3d7gb0q88j1alvvlzbdvzyf1wbgajng68a4g0li9";
        libraryHaskellDepends = [
          base bytestring conduit conduit-extra exceptions
        ];
@@ -116265,6 +116969,19 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "indexed-list-literals" = callPackage
+    ({ mkDerivation, base, OneTuple }:
+     mkDerivation {
+       pname = "indexed-list-literals";
+       version = "0.1.0.1";
+       sha256 = "1l38x0s90gfsrfz43k9sx0xbv4pg93m2pfm6hy3rk52wdxrw0qad";
+       libraryHaskellDepends = [ base OneTuple ];
+       testHaskellDepends = [ base ];
+       homepage = "https://github.com/davidm-d/indexed-list-literals";
+       description = "Type safe indexed list literals";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "indextype" = callPackage
     ({ mkDerivation, base, hspec }:
      mkDerivation {
@@ -116464,40 +117181,9 @@ self: {
   "influxdb" = callPackage
     ({ mkDerivation, aeson, attoparsec, base, bytestring, clock
      , containers, foldl, http-client, http-types, HUnit, lens, mtl
-     , mwc-random, network, optional-args, scientific, tasty
-     , tasty-hunit, tasty-quickcheck, tasty-th, text, time
-     , unordered-containers, vector
-     }:
-     mkDerivation {
-       pname = "influxdb";
-       version = "1.2.2.2";
-       sha256 = "18aijaz7lv64zqkpydmny8nga48fg5lsbmphlk7b92hcfbp8vw4f";
-       isLibrary = true;
-       isExecutable = true;
-       libraryHaskellDepends = [
-         aeson attoparsec base bytestring clock containers foldl http-client
-         http-types lens network optional-args scientific text time
-         unordered-containers vector
-       ];
-       executableHaskellDepends = [
-         aeson base bytestring containers foldl http-client lens mwc-random
-         network optional-args text time vector
-       ];
-       testHaskellDepends = [
-         base http-client HUnit mtl tasty tasty-hunit tasty-quickcheck
-         tasty-th text vector
-       ];
-       homepage = "https://github.com/maoe/influxdb-haskell";
-       description = "Haskell client library for InfluxDB";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "influxdb_1_2_2_3" = callPackage
-    ({ mkDerivation, aeson, attoparsec, base, bytestring, clock
-     , containers, foldl, http-client, http-types, HUnit, lens, mtl
-     , mwc-random, network, optional-args, scientific, tasty
-     , tasty-hunit, tasty-quickcheck, tasty-th, text, time
-     , unordered-containers, vector
+     , network, optional-args, scientific, tasty, tasty-hunit
+     , tasty-quickcheck, tasty-th, text, time, unordered-containers
+     , vector
      }:
      mkDerivation {
        pname = "influxdb";
@@ -116510,10 +117196,6 @@ self: {
          http-types lens network optional-args scientific text time
          unordered-containers vector
        ];
-       executableHaskellDepends = [
-         aeson base bytestring containers foldl http-client lens mwc-random
-         network optional-args text time vector
-       ];
        testHaskellDepends = [
          base http-client HUnit mtl tasty tasty-hunit tasty-quickcheck
          tasty-th text vector
@@ -116521,7 +117203,6 @@ self: {
        homepage = "https://github.com/maoe/influxdb-haskell";
        description = "Haskell client library for InfluxDB";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "informative" = callPackage
@@ -116635,10 +117316,9 @@ self: {
 
   "inline-c_0_5_6_1" = callPackage
     ({ mkDerivation, ansi-wl-pprint, base, binary, bytestring
-     , containers, cryptohash, directory, filepath, gsl, gslcblas
-     , hashable, hspec, mtl, parsec, parsers, QuickCheck, raw-strings-qq
-     , regex-posix, template-haskell, transformers, unordered-containers
-     , vector
+     , containers, cryptohash, directory, filepath, hashable, hspec, mtl
+     , parsec, parsers, QuickCheck, raw-strings-qq, regex-posix
+     , template-haskell, transformers, unordered-containers, vector
      }:
      mkDerivation {
        pname = "inline-c";
@@ -116651,7 +117331,6 @@ self: {
          directory filepath hashable mtl parsec parsers QuickCheck
          template-haskell transformers unordered-containers vector
        ];
-       executableSystemDepends = [ gsl gslcblas ];
        testHaskellDepends = [
          ansi-wl-pprint base containers hashable hspec parsers QuickCheck
          raw-strings-qq regex-posix template-haskell transformers
@@ -116660,13 +117339,13 @@ self: {
        description = "Write Haskell source files including C code inline. No FFI required.";
        license = stdenv.lib.licenses.mit;
        hydraPlatforms = stdenv.lib.platforms.none;
-     }) {inherit (pkgs) gsl; gslcblas = null;};
+     }) {};
 
   "inline-c" = callPackage
-    ({ mkDerivation, ansi-wl-pprint, base, bytestring, containers, gsl
-     , gslcblas, hashable, hspec, mtl, parsec, parsers, QuickCheck
-     , raw-strings-qq, regex-posix, template-haskell, transformers
-     , unordered-containers, vector
+    ({ mkDerivation, ansi-wl-pprint, base, bytestring, containers
+     , hashable, hspec, mtl, parsec, parsers, QuickCheck, raw-strings-qq
+     , regex-posix, template-haskell, transformers, unordered-containers
+     , vector
      }:
      mkDerivation {
        pname = "inline-c";
@@ -116678,7 +117357,6 @@ self: {
          ansi-wl-pprint base bytestring containers hashable mtl parsec
          parsers template-haskell transformers unordered-containers vector
        ];
-       executableSystemDepends = [ gsl gslcblas ];
        testHaskellDepends = [
          ansi-wl-pprint base containers hashable hspec parsers QuickCheck
          raw-strings-qq regex-posix template-haskell transformers
@@ -116686,7 +117364,7 @@ self: {
        ];
        description = "Write Haskell source files including C code inline. No FFI required.";
        license = stdenv.lib.licenses.mit;
-     }) {inherit (pkgs) gsl; gslcblas = null;};
+     }) {};
 
   "inline-c-cpp_0_1_0_0" = callPackage
     ({ mkDerivation, base, inline-c, template-haskell }:
@@ -116802,7 +117480,7 @@ self: {
          lucid-extras plotlyhs text time
        ];
        executableHaskellDepends = [ base text ];
-       testHaskellDepends = [ base text time ];
+       testHaskellDepends = [ base text ];
        homepage = "https://github.com/diffusionkinetics/open/inliterate";
        description = "Interactive literate programming";
        license = stdenv.lib.licenses.mit;
@@ -117312,18 +117990,20 @@ self: {
   "intero" = callPackage
     ({ mkDerivation, array, base, bytestring, containers, directory
      , filepath, ghc, ghc-boot-th, ghc-paths, ghci, haskeline, hspec
-     , process, regex-compat, syb, temporary, time, transformers, unix
+     , mtl, network, process, random, regex-compat, syb, temporary, time
+     , transformers, unix
      }:
      mkDerivation {
        pname = "intero";
-       version = "0.1.24";
-       sha256 = "022ad802z5h55az357047sf6fngp08by7ms71r2kiqkzbccldqgv";
+       version = "0.1.28";
+       sha256 = "0c9hlbqjisb8y96s2rhgklc93g0jmawq3v80ksdvg9asdyfsmafs";
        isLibrary = false;
        isExecutable = true;
        enableSeparateDataOutput = true;
        executableHaskellDepends = [
          array base bytestring containers directory filepath ghc ghc-boot-th
-         ghc-paths ghci haskeline process syb time transformers unix
+         ghc-paths ghci haskeline mtl network process random syb time
+         transformers unix
        ];
        testHaskellDepends = [
          base directory filepath hspec process regex-compat temporary
@@ -117332,6 +118012,7 @@ self: {
        homepage = "https://github.com/commercialhaskell/intero";
        description = "Complete interactive development program for Haskell";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "interpol" = callPackage
@@ -117496,8 +118177,8 @@ self: {
        pname = "intervals";
        version = "0.8.1";
        sha256 = "00vyxf3ba9d7aas3npfapr53w71fslgh69fczjb25axr66fvzqww";
-       revision = "1";
-       editedCabalFile = "0im2m4acx6g638h7yz0x3qyaipfmri59q4zdq1w7n608r3i406dj";
+       revision = "2";
+       editedCabalFile = "0ia6pig8g2hg1nr0p46s3npv0gvd2cn9mkgm232slwynyb63qjkn";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [ array base distributive ghc-prim ];
        testHaskellDepends = [
@@ -117632,21 +118313,12 @@ self: {
      }) {};
 
   "intset" = callPackage
-    ({ mkDerivation, base, bits-extras, bytestring, containers
-     , criterion, deepseq, QuickCheck, test-framework
-     , test-framework-quickcheck2
-     }:
+    ({ mkDerivation, base, bits-extras, bytestring, deepseq }:
      mkDerivation {
        pname = "intset";
        version = "0.1.1.0";
        sha256 = "044nw8z2ga46mal9pr64vsc714n4dibx0k2lwgnrkk49729c7lk0";
        libraryHaskellDepends = [ base bits-extras bytestring deepseq ];
-       testHaskellDepends = [
-         base QuickCheck test-framework test-framework-quickcheck2
-       ];
-       benchmarkHaskellDepends = [
-         base bytestring containers criterion deepseq
-       ];
        homepage = "https://github.com/pxqr/intset";
        description = "Pure, mergeable, succinct Int sets";
        license = stdenv.lib.licenses.bsd3;
@@ -118195,6 +118867,27 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "iproute_1_7_2" = callPackage
+    ({ mkDerivation, appar, base, byteorder, containers, doctest, hspec
+     , network, QuickCheck, safe
+     }:
+     mkDerivation {
+       pname = "iproute";
+       version = "1.7.2";
+       sha256 = "15w56dia70hbqdmd16bbl68sjr0y3195hhykr4vb21krlr821dlp";
+       libraryHaskellDepends = [
+         appar base byteorder containers network
+       ];
+       testHaskellDepends = [
+         appar base byteorder containers doctest hspec network QuickCheck
+         safe
+       ];
+       homepage = "http://www.mew.org/~kazu/proj/iproute/";
+       description = "IP Routing Table";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "iptables-helpers" = callPackage
     ({ mkDerivation, base, containers, mtl, parsec, QuickCheck, safe
      , syb, utf8-string
@@ -118242,7 +118935,7 @@ self: {
 
   "ipython-kernel" = callPackage
     ({ mkDerivation, aeson, base, bytestring, cereal, containers
-     , directory, filepath, mtl, parsec, process, SHA, temporary, text
+     , directory, filepath, mtl, process, SHA, temporary, text
      , transformers, unordered-containers, uuid, zeromq4-haskell
      }:
      mkDerivation {
@@ -118257,9 +118950,6 @@ self: {
          process SHA temporary text transformers unordered-containers uuid
          zeromq4-haskell
        ];
-       executableHaskellDepends = [
-         base filepath mtl parsec text transformers
-       ];
        homepage = "http://github.com/gibiansky/IHaskell";
        description = "A library for creating kernels for IPython frontends";
        license = stdenv.lib.licenses.mit;
@@ -118297,17 +118987,17 @@ self: {
   "irc-client" = callPackage
     ({ mkDerivation, base, bytestring, conduit, connection, containers
      , contravariant, exceptions, irc-conduit, irc-ctcp, mtl
-     , network-conduit-tls, old-locale, profunctors, stm, stm-conduit
+     , network-conduit-tls, old-locale, profunctors, stm, stm-chans
      , text, time, tls, transformers, x509, x509-store, x509-validation
      }:
      mkDerivation {
        pname = "irc-client";
-       version = "1.0.1.0";
-       sha256 = "0c0vzmzpryjfv22kxinnqjf7rkj51dz7shi1gn8ivgcmnhf9hl57";
+       version = "1.0.1.1";
+       sha256 = "1d5xy2q5pkyn4i6d9myw27wr75xci05s446l23kdjli2ldh0g4nx";
        libraryHaskellDepends = [
          base bytestring conduit connection containers contravariant
          exceptions irc-conduit irc-ctcp mtl network-conduit-tls old-locale
-         profunctors stm stm-conduit text time tls transformers x509
+         profunctors stm stm-chans text time tls transformers x509
          x509-store x509-validation
        ];
        homepage = "https://github.com/barrucadu/irc-client";
@@ -118355,8 +119045,8 @@ self: {
      }:
      mkDerivation {
        pname = "irc-conduit";
-       version = "0.2.2.4";
-       sha256 = "118ksbf8kh0bmwk5m32qv609kggwssm3a56zc14f8bg67bkdkrc4";
+       version = "0.2.2.5";
+       sha256 = "1f9dvs4z15wym2a7dpm9h7m3ffpj8d089k6q28my6yx10mi93ksj";
        libraryHaskellDepends = [
          async base bytestring conduit conduit-extra connection irc irc-ctcp
          network-conduit-tls profunctors text time tls transformers
@@ -118367,15 +119057,15 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "irc-conduit_0_3_0_0" = callPackage
+  "irc-conduit_0_3_0_1" = callPackage
     ({ mkDerivation, async, base, bytestring, conduit, conduit-extra
      , connection, irc, irc-ctcp, network-conduit-tls, profunctors, text
      , time, tls, transformers, x509-validation
      }:
      mkDerivation {
        pname = "irc-conduit";
-       version = "0.3.0.0";
-       sha256 = "166p6a3kxrr2cgkdw39pdkc9myzn60411bpg2v23bs01np0336j4";
+       version = "0.3.0.1";
+       sha256 = "0lividbrrc2yydqp55xqji8q6wigb49skrzw9vki6iivxcszka5h";
        libraryHaskellDepends = [
          async base bytestring conduit conduit-extra connection irc irc-ctcp
          network-conduit-tls profunctors text time tls transformers
@@ -118395,6 +119085,8 @@ self: {
        pname = "irc-core";
        version = "2.3.0";
        sha256 = "08nbdnszdakbam1x0fps3n3ziqv21d8ndhmrc7za69pm97wkicjf";
+       revision = "1";
+       editedCabalFile = "1cqc9as84bckjh6yjcfh3pkj11sw35bkj848wzcv6qwjcn8kvcv9";
        libraryHaskellDepends = [
          attoparsec base base64-bytestring bytestring hashable primitive
          text time vector
@@ -118427,8 +119119,8 @@ self: {
        pname = "irc-dcc";
        version = "2.0.1";
        sha256 = "1pyj4ngh6rw0k1cd9nlrhwb6rr3jmpiwaxs6crik8gbl6f3s4234";
-       revision = "5";
-       editedCabalFile = "1m0p5pyaghwjz9rwh4jmm02hrax2yz4z0nlgjij8673hjr8ggdzz";
+       revision = "6";
+       editedCabalFile = "0fcgif6mcmp97plvvf1daiizwg2h9bniya50ldfd6ya932yh8b3c";
        libraryHaskellDepends = [
          attoparsec base binary bytestring io-streams iproute irc-ctcp mtl
          network path safe-exceptions transformers utf8-string
@@ -118570,20 +119262,21 @@ self: {
 
   "iri" = callPackage
     ({ mkDerivation, attoparsec, base, base-prelude, bug, bytestring
-     , contravariant, ip, profunctors, ptr, punycode, QuickCheck
-     , quickcheck-instances, rerebase, semigroups, tasty, tasty-hunit
-     , tasty-quickcheck, template-haskell, text, text-builder, th-lift
-     , th-lift-instances, unordered-containers, vector, vector-builder
+     , contravariant, hashable, ip, profunctors, ptr, punycode
+     , QuickCheck, quickcheck-instances, rerebase, semigroups, tasty
+     , tasty-hunit, tasty-quickcheck, template-haskell, text
+     , text-builder, th-lift, th-lift-instances, unordered-containers
+     , vector, vector-builder, vector-instances
      }:
      mkDerivation {
        pname = "iri";
-       version = "0.3";
-       sha256 = "008ydrls1gyh0jvcjc51zlgzbkq7ajd8pvyfc4zqgprv9naym9zm";
+       version = "0.3.4";
+       sha256 = "071vg01q5swwscvfsqqyk6ysqbl1yqpwnwklhj0h985sxv9zdkm6";
        libraryHaskellDepends = [
-         attoparsec base base-prelude bug bytestring contravariant ip
-         profunctors ptr punycode semigroups template-haskell text
+         attoparsec base base-prelude bug bytestring contravariant hashable
+         ip profunctors ptr punycode semigroups template-haskell text
          text-builder th-lift th-lift-instances unordered-containers vector
-         vector-builder
+         vector-builder vector-instances
        ];
        testHaskellDepends = [
          QuickCheck quickcheck-instances rerebase tasty tasty-hunit
@@ -119049,7 +119742,6 @@ self: {
        libraryHaskellDepends = [
          base bytestring containers ListLike MonadCatchIO-mtl mtl unix
        ];
-       executableHaskellDepends = [ base ];
        homepage = "http://inmachina.net/~jwlato/haskell/iteratee";
        description = "Iteratee-based I/O";
        license = stdenv.lib.licenses.bsd3;
@@ -119535,6 +120227,28 @@ self: {
        license = "GPL";
      }) {inherit (pkgs) libjack2;};
 
+  "jack_0_7_1_3" = callPackage
+    ({ mkDerivation, array, base, bytestring, enumset, event-list
+     , explicit-exception, libjack2, midi, non-negative, semigroups
+     , transformers
+     }:
+     mkDerivation {
+       pname = "jack";
+       version = "0.7.1.3";
+       sha256 = "1n0znnk3q8vic47k1vlv6mdqghrklagcwalvz1arsdfvpy74ig4c";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         array base bytestring enumset event-list explicit-exception midi
+         non-negative semigroups transformers
+       ];
+       libraryPkgconfigDepends = [ libjack2 ];
+       homepage = "http://www.haskell.org/haskellwiki/JACK";
+       description = "Bindings for the JACK Audio Connection Kit";
+       license = "GPL";
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {inherit (pkgs) libjack2;};
+
   "jack-bindings" = callPackage
     ({ mkDerivation, base, c2hs, libjack2, mtl }:
      mkDerivation {
@@ -119917,16 +120631,17 @@ self: {
 
   "jbi" = callPackage
     ({ mkDerivation, aeson, aeson-pretty, base, Cabal, directory
-     , filepath, optparse-applicative, process, tagged, text
+     , filepath, monad-parallel, optparse-applicative, process, tagged
+     , text
      }:
      mkDerivation {
        pname = "jbi";
-       version = "0.1.0.0";
-       sha256 = "13jswxfka5v8n2sdxg0p75ykhgvb351cih2zlid8x05lpiqlw87c";
+       version = "0.2.0.0";
+       sha256 = "0h08p1lra76yx0grxr08z2q83al1yn4a8rbpcahpz47cxxydwry4";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
-         aeson base Cabal directory filepath process tagged
+         aeson base Cabal directory filepath monad-parallel process tagged
        ];
        executableHaskellDepends = [
          aeson-pretty base optparse-applicative text
@@ -120540,9 +121255,8 @@ self: {
      }) {};
 
   "jsc" = callPackage
-    ({ mkDerivation, base, glib, gtk3, hslogger, jmacro, lens
-     , template-haskell, text, transformers, webkitgtk3
-     , webkitgtk3-javascriptcore
+    ({ mkDerivation, base, jmacro, lens, template-haskell, text
+     , transformers, webkitgtk3, webkitgtk3-javascriptcore
      }:
      mkDerivation {
        pname = "jsc";
@@ -120552,10 +121266,6 @@ self: {
          base jmacro lens template-haskell text transformers webkitgtk3
          webkitgtk3-javascriptcore
        ];
-       testHaskellDepends = [
-         base glib gtk3 hslogger jmacro lens template-haskell text
-         transformers webkitgtk3 webkitgtk3-javascriptcore
-       ];
        description = "High level interface for webkit-javascriptcore";
        license = stdenv.lib.licenses.mit;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -120689,6 +121399,8 @@ self: {
        pname = "json-autotype";
        version = "1.0.18";
        sha256 = "0h2aiq7k6s2qw81mrj77i86vfaci0387cwm6lbfzfag3r4993w7h";
+       revision = "1";
+       editedCabalFile = "0f67frvi5jsn47w02kqi834mkjy4kz451fic5m4i24lyykw19kvm";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -121151,7 +121863,7 @@ self: {
      }) {};
 
   "json-stream" = callPackage
-    ({ mkDerivation, aeson, base, bytestring, directory, doctest, hspec
+    ({ mkDerivation, aeson, base, bytestring, directory, hspec
      , QuickCheck, quickcheck-unicode, scientific, text
      , unordered-containers, vector
      }:
@@ -121163,8 +121875,8 @@ self: {
          aeson base bytestring scientific text unordered-containers vector
        ];
        testHaskellDepends = [
-         aeson base bytestring directory doctest hspec QuickCheck
-         quickcheck-unicode scientific text unordered-containers vector
+         aeson base bytestring directory hspec QuickCheck quickcheck-unicode
+         scientific text unordered-containers vector
        ];
        homepage = "https://github.com/ondrap/json-stream";
        description = "Incremental applicative JSON parser";
@@ -121521,6 +122233,34 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "judge" = callPackage
+    ({ mkDerivation, aeson, ansi-wl-pprint, attoparsec, base
+     , bytestring, containers, directory, filepath, mtl
+     , optparse-applicative, pointedlist, terminal-size, texmath, text
+     , transformers, unordered-containers, utf8-string, vector, yaml
+     }:
+     mkDerivation {
+       pname = "judge";
+       version = "0.1.2.0";
+       sha256 = "14lrqrzw70cjzz0skihh9w9kfgah6rb7023dbgmcqbx0m8xjiiaw";
+       isLibrary = true;
+       isExecutable = true;
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         aeson ansi-wl-pprint attoparsec base bytestring containers mtl
+         pointedlist terminal-size texmath text transformers
+         unordered-containers utf8-string vector yaml
+       ];
+       executableHaskellDepends = [
+         ansi-wl-pprint attoparsec base directory filepath
+         optparse-applicative text unordered-containers yaml
+       ];
+       homepage = "https://github.com/slakkenhuis/judge#readme";
+       description = "Tableau-based theorem prover";
+       license = stdenv.lib.licenses.gpl3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "judy" = callPackage
     ({ mkDerivation, base, bytestring, ghc-prim, hspec, Judy
      , QuickCheck
@@ -121565,8 +122305,8 @@ self: {
      }:
      mkDerivation {
        pname = "jukebox";
-       version = "0.3.1";
-       sha256 = "0dg54vbn9cxcskyc92grz39zp863ki6da8kwdz0nfkfm5xzsxlrs";
+       version = "0.3.2";
+       sha256 = "098vli26hrgkjxw3y1sfc7fi3wj72ka1dqy1k49z22rigisffbwj";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -121652,6 +122392,24 @@ self: {
        license = stdenv.lib.licenses.bsd2;
      }) {};
 
+  "justified-containers_0_3_0_0" = callPackage
+    ({ mkDerivation, base, containers, ghc-prim, hspec, QuickCheck
+     , roles, should-not-typecheck
+     }:
+     mkDerivation {
+       pname = "justified-containers";
+       version = "0.3.0.0";
+       sha256 = "11ryff281gbn46zz7vax97h0qn5xn1mk7gdjpb38xs9ns36c0c6q";
+       libraryHaskellDepends = [ base containers roles ];
+       testHaskellDepends = [
+         base containers ghc-prim hspec QuickCheck should-not-typecheck
+       ];
+       homepage = "https://github.com/matt-noonan/justified-containers";
+       description = "Keyed container types with type-checked proofs of key presence";
+       license = stdenv.lib.licenses.bsd2;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "jvm" = callPackage
     ({ mkDerivation, base, bytestring, choice, constraints, criterion
      , deepseq, distributed-closure, exceptions, hspec, jni, singletons
@@ -121782,9 +122540,8 @@ self: {
      }) {};
 
   "kafka-client" = callPackage
-    ({ mkDerivation, base, bytestring, cereal, containers, digest
-     , dlist, hspec, hspec-discover, network, process, QuickCheck
-     , snappy, temporary, time, zlib
+    ({ mkDerivation, base, bytestring, cereal, digest, dlist, hspec
+     , hspec-discover, network, QuickCheck, snappy, time, zlib
      }:
      mkDerivation {
        pname = "kafka-client";
@@ -121794,8 +122551,7 @@ self: {
          base bytestring cereal digest dlist network snappy time zlib
        ];
        testHaskellDepends = [
-         base bytestring cereal containers hspec hspec-discover network
-         process QuickCheck temporary time
+         base bytestring cereal hspec hspec-discover QuickCheck time
        ];
        homepage = "https://github.com/abhinav/kafka-client";
        description = "Low-level Haskell client library for Apache Kafka 0.7.";
@@ -122069,7 +122825,6 @@ self: {
          directory dotgen filepath netlist netlist-to-vhdl process random
          sized-types strict template-haskell
        ];
-       executableHaskellDepends = [ base ];
        homepage = "http://ittc.ku.edu/csdl/fpg/Tools/KansasLava";
        description = "Kansas Lava is a hardware simulator and VHDL generator";
        license = stdenv.lib.licenses.bsd3;
@@ -122091,7 +122846,6 @@ self: {
          ansi-terminal base bytestring data-default directory filepath
          kansas-lava network sized-types
        ];
-       executableHaskellDepends = [ base ];
        homepage = "http://ittc.ku.edu/csdl/fpg/Tools/KansasLava";
        description = "FPGA Cores Written in Kansas Lava";
        license = stdenv.lib.licenses.bsd3;
@@ -122240,8 +122994,8 @@ self: {
      }:
      mkDerivation {
        pname = "katip-elasticsearch";
-       version = "0.4.0.3";
-       sha256 = "0aji0738dz7i0lry30y6rpfbhvcpc79mfqc77nlvaplb3plw0m51";
+       version = "0.4.0.4";
+       sha256 = "0zg0f5czqff9zd0rnkj68bmxmizrl01q4wbvz43hj5j8mj0jzybj";
        libraryHaskellDepends = [
          aeson async base bloodhound bytestring enclosed-exceptions
          exceptions http-client http-types katip retry scientific stm
@@ -122263,37 +123017,21 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
-  "katip-elasticsearch_0_4_0_4" = callPackage
-    ({ mkDerivation, aeson, async, base, bloodhound, bytestring
-     , containers, criterion, deepseq, enclosed-exceptions, exceptions
-     , http-client, http-types, katip, lens, lens-aeson
-     , quickcheck-instances, random, retry, scientific, stm, stm-chans
-     , tagged, tasty, tasty-hunit, tasty-quickcheck, text, time
-     , transformers, unordered-containers, uuid, vector
+  "katip-rollbar" = callPackage
+    ({ mkDerivation, aeson, async, base, hostname, http-client, katip
+     , rollbar-hs, stm-chans, text, time
      }:
      mkDerivation {
-       pname = "katip-elasticsearch";
-       version = "0.4.0.4";
-       sha256 = "0zg0f5czqff9zd0rnkj68bmxmizrl01q4wbvz43hj5j8mj0jzybj";
+       pname = "katip-rollbar";
+       version = "0.3.0.1";
+       sha256 = "1phci2x12qmih9aaly0j1g1a07wcd80rrkwqgfy3pxnbjx6d6817";
        libraryHaskellDepends = [
-         aeson async base bloodhound bytestring enclosed-exceptions
-         exceptions http-client http-types katip retry scientific stm
-         stm-chans text time transformers unordered-containers uuid
-       ];
-       testHaskellDepends = [
-         aeson base bloodhound bytestring containers http-client http-types
-         katip lens lens-aeson quickcheck-instances scientific stm tagged
-         tasty tasty-hunit tasty-quickcheck text time transformers
-         unordered-containers vector
-       ];
-       benchmarkHaskellDepends = [
-         aeson base bloodhound criterion deepseq random text
-         unordered-containers uuid
+         aeson async base hostname http-client katip rollbar-hs stm-chans
+         text time
        ];
-       homepage = "https://github.com/Soostone/katip";
-       description = "ElasticSearch scribe for the Katip logging framework";
+       homepage = "https://github.com/joneshf/katip-rollbar#readme";
+       description = "Katip scribe that logs to Rollbar";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "katip-syslog" = callPackage
@@ -122977,8 +123715,8 @@ self: {
     ({ mkDerivation, base, hspec }:
      mkDerivation {
        pname = "key-state";
-       version = "0.0.0";
-       sha256 = "182j5kmaxwvnhaa98bkiwb62ga8ylrdyyjs9vkvh2rvm4vjildrp";
+       version = "0.1.0";
+       sha256 = "0q5pfayi02xhka2xdn2nwng1cms0lyh6pbysvpxsmbiwzq80p4kp";
        libraryHaskellDepends = [ base ];
        testHaskellDepends = [ base hspec ];
        homepage = "https://github.com/jxv/key-state#readme";
@@ -123024,7 +123762,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base udbus ];
-       executableHaskellDepends = [ base ];
        homepage = "https://github.com/lunaryorn/haskell-keyring";
        description = "Keyring access";
        license = stdenv.lib.licenses.mit;
@@ -123860,12 +124597,12 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "lackey_1_0_0" = callPackage
+  "lackey_1_0_1" = callPackage
     ({ mkDerivation, base, hspec, servant, servant-foreign, text }:
      mkDerivation {
        pname = "lackey";
-       version = "1.0.0";
-       sha256 = "0spgcfg2py1ff1zak211xsgmccpg56c9bbv14xsgjdig9k6cfyz0";
+       version = "1.0.1";
+       sha256 = "0vlic5ad1zdqhlg0jd3zgc65acq7270607blkf6qgm6bk2g3j1pr";
        libraryHaskellDepends = [ base servant servant-foreign text ];
        testHaskellDepends = [ base hspec servant servant-foreign text ];
        homepage = "https://github.com/tfausak/lackey#readme";
@@ -124421,12 +125158,10 @@ self: {
      }) {};
 
   "lambdacube-compiler" = callPackage
-    ({ mkDerivation, aeson, ansi-wl-pprint, async, base
-     , base64-bytestring, bytestring, containers, deepseq, directory
-     , exceptions, filepath, JuicyPixels, lambdacube-ir, megaparsec
-     , monad-control, mtl, optparse-applicative, patience, pretty-show
-     , process, QuickCheck, semigroups, tasty, tasty-quickcheck, text
-     , time, vect, vector, websockets
+    ({ mkDerivation, aeson, ansi-wl-pprint, base, bytestring
+     , containers, directory, exceptions, filepath, lambdacube-ir
+     , megaparsec, mtl, optparse-applicative, pretty-show, semigroups
+     , text, vector
      }:
      mkDerivation {
        pname = "lambdacube-compiler";
@@ -124440,11 +125175,7 @@ self: {
          lambdacube-ir megaparsec mtl pretty-show semigroups text vector
        ];
        executableHaskellDepends = [
-         aeson ansi-wl-pprint async base base64-bytestring bytestring
-         containers deepseq directory exceptions filepath JuicyPixels
-         lambdacube-ir megaparsec monad-control mtl optparse-applicative
-         patience pretty-show process QuickCheck semigroups tasty
-         tasty-quickcheck text time vect vector websockets
+         aeson base bytestring filepath optparse-applicative
        ];
        homepage = "http://lambdacube3d.com";
        description = "LambdaCube 3D is a DSL to program GPUs";
@@ -124527,10 +125258,8 @@ self: {
      }) {};
 
   "lambdacube-gl" = callPackage
-    ({ mkDerivation, aeson, base, base64-bytestring, bytestring
-     , containers, exceptions, GLFW-b, JuicyPixels, lambdacube-ir, mtl
-     , network, OpenGLRaw, text, time, vector, vector-algorithms
-     , wavefront, websockets
+    ({ mkDerivation, base, bytestring, containers, JuicyPixels
+     , lambdacube-ir, mtl, OpenGLRaw, vector, vector-algorithms
      }:
      mkDerivation {
        pname = "lambdacube-gl";
@@ -124542,11 +125271,6 @@ self: {
          base bytestring containers JuicyPixels lambdacube-ir mtl OpenGLRaw
          vector vector-algorithms
        ];
-       executableHaskellDepends = [
-         aeson base base64-bytestring bytestring containers exceptions
-         GLFW-b JuicyPixels lambdacube-ir mtl network OpenGLRaw text time
-         vector wavefront websockets
-       ];
        homepage = "http://lambdacube3d.com";
        description = "OpenGL 3.3 Core Profile backend for LambdaCube 3D";
        license = stdenv.lib.licenses.bsd3;
@@ -124730,16 +125454,15 @@ self: {
     ({ mkDerivation, alex, ansi-terminal, ansi-wl-pprint, array, base
      , composition-prelude, criterion, deepseq, happy, hspec
      , hspec-dirstream, lens, recursion-schemes, system-filepath
-     , unordered-containers
      }:
      mkDerivation {
        pname = "language-ats";
-       version = "0.1.1.18";
-       sha256 = "0ahby04g56wgz73r8k51v8afrvwn898crdbx9scbklh0by5cjfpj";
+       version = "0.3.0.7";
+       sha256 = "0q1nap6277w13f389jlvyp62018ywzay7rc04j6n5wmcs240inff";
        enableSeparateDataOutput = true;
        libraryHaskellDepends = [
          ansi-terminal ansi-wl-pprint array base composition-prelude deepseq
-         lens recursion-schemes unordered-containers
+         lens recursion-schemes
        ];
        libraryToolDepends = [ alex happy ];
        testHaskellDepends = [
@@ -124748,6 +125471,7 @@ self: {
        benchmarkHaskellDepends = [ base criterion ];
        description = "Parser and pretty-printer for ATS";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "language-bash" = callPackage
@@ -124771,9 +125495,8 @@ self: {
      }) {};
 
   "language-boogie" = callPackage
-    ({ mkDerivation, ansi-terminal, base, cmdargs, containers, filepath
-     , HUnit, lens, mtl, parsec, pretty, random, stream-monad, time
-     , transformers
+    ({ mkDerivation, ansi-terminal, base, cmdargs, containers, lens
+     , mtl, parsec, pretty, random, stream-monad, time, transformers
      }:
      mkDerivation {
        pname = "language-boogie";
@@ -124786,8 +125509,8 @@ self: {
          transformers
        ];
        executableHaskellDepends = [
-         ansi-terminal base cmdargs containers filepath HUnit lens mtl
-         parsec pretty random stream-monad time transformers
+         ansi-terminal base cmdargs containers lens mtl parsec pretty random
+         stream-monad time transformers
        ];
        homepage = "https://bitbucket.org/nadiapolikarpova/boogaloo";
        description = "Interpreter and language infrastructure for Boogie";
@@ -124834,6 +125557,26 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "language-c_0_7_2" = callPackage
+    ({ mkDerivation, alex, array, base, bytestring, containers
+     , directory, filepath, happy, pretty, process, syb
+     }:
+     mkDerivation {
+       pname = "language-c";
+       version = "0.7.2";
+       sha256 = "1ra9spagayal2iw996qc0vafglxgyjf04fa2sv44f5z5v3fj5bb3";
+       libraryHaskellDepends = [
+         array base bytestring containers directory filepath pretty process
+         syb
+       ];
+       libraryToolDepends = [ alex happy ];
+       testHaskellDepends = [ base directory filepath process ];
+       homepage = "http://visq.github.io/language-c/";
+       description = "Analysis and generation of C code";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "language-c-comments" = callPackage
     ({ mkDerivation, alex, array, base, language-c }:
      mkDerivation {
@@ -124861,7 +125604,6 @@ self: {
          array base containers filepath language-c-quote mainland-pretty
          template-haskell
        ];
-       testHaskellDepends = [ base language-c-quote ];
        homepage = "https://github.com/mchakravarty/language-c-inline/";
        description = "Inline C & Objective-C code in Haskell for language interoperability";
        license = stdenv.lib.licenses.bsd3;
@@ -124907,10 +125649,9 @@ self: {
      }) {};
 
   "language-conf" = callPackage
-    ({ mkDerivation, aeson, base, bytestring, deepseq, directory
-     , filepath, hspec, hspec-megaparsec, megaparsec
-     , optparse-applicative, pretty, QuickCheck, scientific, semigroups
-     , text, transformers, unordered-containers, vector, yaml
+    ({ mkDerivation, aeson, base, deepseq, directory, filepath, hspec
+     , hspec-megaparsec, megaparsec, pretty, QuickCheck, scientific
+     , semigroups, text, transformers, unordered-containers, vector
      }:
      mkDerivation {
        pname = "language-conf";
@@ -124922,10 +125663,6 @@ self: {
          aeson base deepseq directory filepath megaparsec pretty scientific
          semigroups text unordered-containers vector
        ];
-       executableHaskellDepends = [
-         aeson base bytestring filepath megaparsec optparse-applicative
-         pretty text yaml
-       ];
        testHaskellDepends = [
          aeson base directory filepath hspec hspec-megaparsec megaparsec
          pretty QuickCheck semigroups text transformers
@@ -125030,11 +125767,6 @@ self: {
          pretty ShellCheck split template-haskell text th-lift
          th-lift-instances transformers unordered-containers yaml
        ];
-       executableHaskellDepends = [
-         aeson base bytestring directory filepath free Glob mtl parsec
-         pretty ShellCheck split template-haskell text th-lift
-         th-lift-instances transformers unordered-containers yaml
-       ];
        testHaskellDepends = [
          aeson base bytestring directory filepath free Glob hspec HUnit mtl
          parsec pretty process QuickCheck ShellCheck split template-haskell
@@ -125386,9 +126118,9 @@ self: {
 
   "language-lua2" = callPackage
     ({ mkDerivation, base, containers, deepseq, Earley
-     , lexer-applicative, microlens, optparse-applicative, QuickCheck
-     , regex-applicative, semigroups, srcloc, tasty, tasty-hunit
-     , tasty-quickcheck, transformers, unordered-containers, wl-pprint
+     , lexer-applicative, microlens, QuickCheck, regex-applicative
+     , semigroups, srcloc, tasty, tasty-hunit, tasty-quickcheck
+     , transformers, unordered-containers, wl-pprint
      }:
      mkDerivation {
        pname = "language-lua2";
@@ -125401,9 +126133,6 @@ self: {
          regex-applicative semigroups srcloc transformers
          unordered-containers wl-pprint
        ];
-       executableHaskellDepends = [
-         base Earley lexer-applicative optparse-applicative srcloc wl-pprint
-       ];
        testHaskellDepends = [
          base deepseq lexer-applicative QuickCheck semigroups srcloc tasty
          tasty-hunit tasty-quickcheck unordered-containers
@@ -125557,14 +126286,14 @@ self: {
      , lens-aeson, megaparsec, memory, mtl, neat-interpolation
      , operational, optparse-applicative, parallel-io, parsec
      , pcre-utils, process, protolude, random, regex-pcre-builtin
-     , scientific, semigroups, servant, servant-client, split, stm
+     , scientific, servant, servant-client, split, stm
      , strict-base-types, temporary, text, time, transformers, unix
      , unordered-containers, vector, yaml
      }:
      mkDerivation {
        pname = "language-puppet";
-       version = "1.3.13";
-       sha256 = "1qngbjpyxd7m4jawc40095v84a8bgk4xk7an9lb1yzp739nvcln1";
+       version = "1.3.14";
+       sha256 = "1vf80dfdi2w5kwkbpqjqd9iahi7fg8qw5h243x8j286hzg3hx59d";
        isLibrary = true;
        isExecutable = true;
        enableSeparateDataOutput = true;
@@ -125574,15 +126303,15 @@ self: {
          filecache filepath formatting hashable hruby hslogger hspec
          http-api-data http-client lens lens-aeson megaparsec memory mtl
          operational parsec pcre-utils process protolude random
-         regex-pcre-builtin scientific semigroups servant servant-client
-         split stm strict-base-types text time transformers unix
-         unordered-containers vector yaml
+         regex-pcre-builtin scientific servant servant-client split stm
+         strict-base-types text time transformers unix unordered-containers
+         vector yaml
        ];
        executableHaskellDepends = [
          aeson ansi-wl-pprint base bytestring containers Glob hslogger
          http-client lens megaparsec mtl optparse-applicative parallel-io
-         regex-pcre-builtin servant-client strict-base-types text
-         transformers unordered-containers vector yaml
+         regex-pcre-builtin strict-base-types text transformers
+         unordered-containers vector yaml
        ];
        testHaskellDepends = [
          ansi-wl-pprint base Glob hslogger hspec hspec-megaparsec HUnit lens
@@ -125596,6 +126325,54 @@ self: {
        hydraPlatforms = [ "x86_64-linux" ];
      }) {};
 
+  "language-puppet_1_3_15" = callPackage
+    ({ mkDerivation, aeson, ansi-wl-pprint, attoparsec, base
+     , base16-bytestring, bytestring, case-insensitive, containers
+     , cryptonite, directory, exceptions, filecache, filepath
+     , formatting, Glob, hashable, hruby, hslogger, hspec
+     , hspec-megaparsec, http-api-data, http-client, HUnit, lens
+     , lens-aeson, megaparsec, memory, mtl, neat-interpolation
+     , operational, optparse-applicative, parallel-io, parsec
+     , pcre-utils, process, protolude, random, regex-pcre-builtin
+     , scientific, servant, servant-client, split, stm
+     , strict-base-types, temporary, text, time, transformers, unix
+     , unordered-containers, vector, yaml
+     }:
+     mkDerivation {
+       pname = "language-puppet";
+       version = "1.3.15";
+       sha256 = "0irlm003kkddxv26a9vjs4b6xwkjz7m2himxvz500yykmv3l0ajv";
+       isLibrary = true;
+       isExecutable = true;
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         aeson ansi-wl-pprint attoparsec base base16-bytestring bytestring
+         case-insensitive containers cryptonite directory exceptions
+         filecache filepath formatting hashable hruby hslogger hspec
+         http-api-data http-client lens lens-aeson megaparsec memory mtl
+         operational parsec pcre-utils process protolude random
+         regex-pcre-builtin scientific servant servant-client split stm
+         strict-base-types text time transformers unix unordered-containers
+         vector yaml
+       ];
+       executableHaskellDepends = [
+         aeson ansi-wl-pprint base bytestring containers Glob hslogger
+         http-client lens megaparsec mtl optparse-applicative parallel-io
+         regex-pcre-builtin strict-base-types text transformers
+         unordered-containers vector yaml
+       ];
+       testHaskellDepends = [
+         ansi-wl-pprint base Glob hslogger hspec hspec-megaparsec HUnit lens
+         megaparsec mtl neat-interpolation protolude scientific
+         strict-base-types temporary text transformers unix
+         unordered-containers vector
+       ];
+       homepage = "http://lpuppet.banquise.net/";
+       description = "Tools to parse and evaluate the Puppet DSL";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "language-python" = callPackage
     ({ mkDerivation, alex, array, base, containers, happy, monads-tf
      , pretty, transformers, utf8-string
@@ -126404,15 +127181,16 @@ self: {
      }) {};
 
   "lca" = callPackage
-    ({ mkDerivation, base, doctest }:
+    ({ mkDerivation, base, Cabal, cabal-doctest, doctest }:
      mkDerivation {
        pname = "lca";
-       version = "0.3";
-       sha256 = "081fk0ci5vb84w4zwah6qwbr0i78v2pr6m6nn1y226vv5w3kakza";
+       version = "0.3.1";
+       sha256 = "0kj3zsmzckczp51w70x1aqayk2fay4vcqwz8j6sdv0hdw1d093ca";
+       setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [ base ];
        testHaskellDepends = [ base doctest ];
        homepage = "http://github.com/ekmett/lca/";
-       description = "O(log n) persistent on-line lowest common ancestor calculation without preprocessing";
+       description = "O(log n) persistent online lowest common ancestor search without preprocessing";
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
@@ -126942,8 +127720,8 @@ self: {
        pname = "lens";
        version = "4.16";
        sha256 = "16wz3s62zmnmis7xs9jahyc7b75090b96ayk98c3gvzmpg7bx54z";
-       revision = "1";
-       editedCabalFile = "0pgjpixph8idgf2wp8z25cbq6jf2bddigfs7r7nbln2a1v8yli1y";
+       revision = "2";
+       editedCabalFile = "1iwp8shnis8gk01ys9bp3bn5khsi6mp0ji9b18qkg1mpp7nvggcq";
        setupHaskellDepends = [ base Cabal cabal-doctest filepath ];
        libraryHaskellDepends = [
          array base base-orphans bifunctors bytestring call-stack comonad
@@ -127013,8 +127791,8 @@ self: {
        pname = "lens-aeson";
        version = "1.0.2";
        sha256 = "1k028ycmhz7mnjlrap88fqix4nmmpyy6b88m16kv77d3r8sz04a3";
-       revision = "1";
-       editedCabalFile = "1xkxncl218ni4idq90g6bdd7vnwxshcpa1xk11fd3kc3i3j90pqs";
+       revision = "2";
+       editedCabalFile = "1nynlx0jyn5hfsjmzdd9pdj95hnfc6r7gfb3isdqs05ma8dihaws";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          aeson attoparsec base bytestring lens scientific text
@@ -127360,10 +128138,8 @@ self: {
      }:
      mkDerivation {
        pname = "lenz";
-       version = "0.2.2.1";
-       sha256 = "0w8imq8x5g71byjv8q00fp688mc02kf19n2i23b8474z6sk1mhg8";
-       revision = "2";
-       editedCabalFile = "1znj9hjyk8dqcmq2kjdvkpjrn2vqf388n7bmdhd61lkfhjqx6w3m";
+       version = "0.3.0.0";
+       sha256 = "17a3d91az0qv138q7x8wbka797z9pfxl3mbyydcr7i7p87dk48k3";
        libraryHaskellDepends = [
          base base-unicode-symbols hs-functors transformers
        ];
@@ -127401,7 +128177,7 @@ self: {
      }) {};
 
   "leveldb-haskell" = callPackage
-    ({ mkDerivation, async, base, bytestring, data-default, directory
+    ({ mkDerivation, base, bytestring, data-default, directory
      , exceptions, filepath, leveldb, mtl, QuickCheck, resourcet, tasty
      , tasty-quickcheck, temporary, transformers
      }:
@@ -127416,9 +128192,6 @@ self: {
          transformers
        ];
        librarySystemDepends = [ leveldb ];
-       executableHaskellDepends = [
-         async base bytestring data-default resourcet transformers
-       ];
        testHaskellDepends = [
          base bytestring data-default directory exceptions mtl QuickCheck
          tasty tasty-quickcheck temporary transformers
@@ -127429,9 +128202,9 @@ self: {
      }) {inherit (pkgs) leveldb;};
 
   "leveldb-haskell-fork" = callPackage
-    ({ mkDerivation, async, base, bytestring, data-default, filepath
-     , hspec, hspec-expectations, leveldb, mtl, process, QuickCheck
-     , resourcet, transformers
+    ({ mkDerivation, base, bytestring, data-default, filepath, hspec
+     , hspec-expectations, leveldb, mtl, process, QuickCheck, resourcet
+     , transformers
      }:
      mkDerivation {
        pname = "leveldb-haskell-fork";
@@ -127443,9 +128216,6 @@ self: {
          base bytestring data-default filepath resourcet transformers
        ];
        librarySystemDepends = [ leveldb ];
-       executableHaskellDepends = [
-         async base bytestring data-default resourcet transformers
-       ];
        testHaskellDepends = [
          base bytestring data-default hspec hspec-expectations mtl process
          QuickCheck transformers
@@ -127470,8 +128240,7 @@ self: {
      }) {};
 
   "levmar-chart" = callPackage
-    ({ mkDerivation, base, Chart, colour, data-accessor, levmar, random
-     }:
+    ({ mkDerivation, base, Chart, colour, data-accessor, levmar }:
      mkDerivation {
        pname = "levmar-chart";
        version = "0.2";
@@ -127479,9 +128248,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base Chart colour data-accessor levmar ];
-       executableHaskellDepends = [
-         base Chart colour data-accessor levmar random
-       ];
        description = "Plots the results of the Levenberg-Marquardt algorithm in a chart";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -127582,13 +128348,7 @@ self: {
      }) {};
 
   "lhc" = callPackage
-    ({ mkDerivation, ansi-wl-pprint, base, binary, bytestring
-     , bytestring-trie, Cabal, containers, core, derive, digest
-     , directory, extensible-exceptions, filepath, haskell98, HUnit, mtl
-     , parallel, pretty, process, QuickCheck, test-framework
-     , test-framework-hunit, test-framework-quickcheck, time, unix
-     , xhtml
-     }:
+    ({ mkDerivation }:
      mkDerivation {
        pname = "lhc";
        version = "0.10";
@@ -127596,13 +128356,6 @@ self: {
        isLibrary = false;
        isExecutable = true;
        enableSeparateDataOutput = true;
-       executableHaskellDepends = [
-         ansi-wl-pprint base binary bytestring bytestring-trie Cabal
-         containers core derive digest directory extensible-exceptions
-         filepath haskell98 HUnit mtl parallel pretty process QuickCheck
-         test-framework test-framework-hunit test-framework-quickcheck time
-         unix xhtml
-       ];
        homepage = "http://lhc.seize.it/";
        description = "LHC Haskell Compiler";
        license = stdenv.lib.licenses.publicDomain;
@@ -127899,8 +128652,8 @@ self: {
   "liblastfm" = callPackage
     ({ mkDerivation, aeson, base, bytestring, cereal, containers
      , cryptonite, hspec, hspec-expectations-lens, http-client
-     , http-client-tls, HUnit, lens, lens-aeson, network-uri
-     , profunctors, semigroups, text, transformers, xml-conduit
+     , http-client-tls, lens, lens-aeson, network-uri, profunctors
+     , semigroups, text, transformers, xml-conduit
      , xml-html-conduit-lens
      }:
      mkDerivation {
@@ -127914,8 +128667,8 @@ self: {
        ];
        testHaskellDepends = [
          aeson base bytestring cereal containers cryptonite hspec
-         hspec-expectations-lens http-client http-client-tls HUnit lens
-         lens-aeson network-uri profunctors text transformers xml-conduit
+         hspec-expectations-lens http-client http-client-tls lens lens-aeson
+         network-uri profunctors text transformers xml-conduit
          xml-html-conduit-lens
        ];
        description = "Lastfm API interface";
@@ -127984,7 +128737,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base ];
-       executableHaskellDepends = [ base ];
        homepage = "https://github.com/mainland/libltdl";
        description = "FFI interface to libltdl";
        license = stdenv.lib.licenses.bsd3;
@@ -128513,6 +129265,29 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "lifted-async_0_10_0" = callPackage
+    ({ mkDerivation, async, base, constraints, criterion, deepseq
+     , HUnit, lifted-base, monad-control, mtl, tasty, tasty-hunit
+     , tasty-th, transformers-base
+     }:
+     mkDerivation {
+       pname = "lifted-async";
+       version = "0.10.0";
+       sha256 = "0w6xgyw2d3mcv8n7wnnma5dx2slz2ngis5k45x68dh7nv1azzs37";
+       libraryHaskellDepends = [
+         async base constraints lifted-base monad-control transformers-base
+       ];
+       testHaskellDepends = [
+         async base HUnit lifted-base monad-control mtl tasty tasty-hunit
+         tasty-th
+       ];
+       benchmarkHaskellDepends = [ async base criterion deepseq ];
+       homepage = "https://github.com/maoe/lifted-async";
+       description = "Run lifted IO operations asynchronously and wait for their results";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "lifted-base" = callPackage
     ({ mkDerivation, base, criterion, HUnit, monad-control, monad-peel
      , test-framework, test-framework-hunit, transformers
@@ -128646,8 +129421,7 @@ self: {
          transformers
        ];
        testHaskellDepends = [
-         aeson api-builder base bytestring hspec http-client http-client-tls
-         http-types network text transformers
+         aeson api-builder base bytestring hspec text transformers
        ];
        homepage = "https://github.com/cmoresid/lightning-haskell#readme";
        description = "Haskell client for lightning-viz REST API";
@@ -128883,8 +129657,8 @@ self: {
        pname = "linear";
        version = "1.20.7";
        sha256 = "1dna0zf4qwqwvslz0nkkfclvbflfvf10qydnjsi20wijilkbd22b";
-       revision = "1";
-       editedCabalFile = "0ghmlkk5cy0pylx47rwr37p403ml7x6sg0sapz9c7534nzzhxq0g";
+       revision = "2";
+       editedCabalFile = "1w5194k2sqr508942xr9acfzk80avc4bwax347blw4js4vl5adwn";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          adjunctions base base-orphans binary bytes cereal containers
@@ -128909,6 +129683,8 @@ self: {
        pname = "linear-accelerate";
        version = "0.5.0.1";
        sha256 = "0khbh6z348pv2jwyfip50hvls7pqa91bwkzks4988vxh54mp2i1l";
+       revision = "1";
+       editedCabalFile = "1r0h6mk2ai11f9grcwfbq4a5j7s9zn32m4finrigar4q22xkxf2j";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          accelerate base distributive lens linear
@@ -129586,8 +130362,8 @@ self: {
      }:
      mkDerivation {
        pname = "liquid-fixpoint";
-       version = "0.7.0.6";
-       sha256 = "1sbvnj2as93dywh43zcsb23hr1mqlia5gr2sw08ynqh48dcx181p";
+       version = "0.7.0.7";
+       sha256 = "1b1pf6cgbgnd0lqn1r4lb8y6hm7qybyc45rr51kxnvqryvb9g9cz";
        configureFlags = [ "-fbuild-external" ];
        isLibrary = true;
        isExecutable = true;
@@ -129616,26 +130392,27 @@ self: {
     ({ mkDerivation, aeson, array, base, bifunctors, binary, bytestring
      , Cabal, cereal, cmdargs, containers, data-default, deepseq, Diff
      , directory, exceptions, filepath, fingertree, ghc, ghc-boot
-     , ghc-paths, ghc-prim, hashable, hpc, hscolour, liquid-fixpoint
-     , located-base, mtl, optparse-applicative, parsec, pretty, process
-     , QuickCheck, stm, syb, tagged, tasty, tasty-ant-xml, tasty-hunit
-     , tasty-rerun, template-haskell, temporary, text, text-format
-     , th-lift, time, transformers, unordered-containers, vector, z3
+     , ghc-paths, ghc-prim, gitrev, hashable, hpc, hscolour
+     , liquid-fixpoint, located-base, mtl, optparse-applicative
+     , optparse-simple, parsec, pretty, process, QuickCheck, stm, syb
+     , tagged, tasty, tasty-ant-xml, tasty-hunit, tasty-rerun
+     , template-haskell, temporary, text, text-format, th-lift, time
+     , transformers, unordered-containers, vector, z3
      }:
      mkDerivation {
        pname = "liquidhaskell";
-       version = "0.8.2.2";
-       sha256 = "0rq0fs5ydwiqi2f3pn9q4d1agbmz0z46ws2q5w8y7lrsb2mr4zf3";
+       version = "0.8.2.4";
+       sha256 = "07cbw14301pa2h4faxrjb1kfp2r5zdwpv5slm491kldzm53y8ry3";
        isLibrary = true;
        isExecutable = true;
        enableSeparateDataOutput = true;
        libraryHaskellDepends = [
          aeson array base bifunctors binary bytestring Cabal cereal cmdargs
          containers data-default deepseq Diff directory exceptions filepath
-         fingertree ghc ghc-boot ghc-paths ghc-prim hashable hpc hscolour
-         liquid-fixpoint located-base mtl parsec pretty process QuickCheck
-         syb template-haskell temporary text text-format th-lift time
-         transformers unordered-containers vector
+         fingertree ghc ghc-boot ghc-paths ghc-prim gitrev hashable hpc
+         hscolour liquid-fixpoint located-base mtl optparse-simple parsec
+         pretty process QuickCheck syb template-haskell temporary text
+         text-format th-lift time transformers unordered-containers vector
        ];
        executableHaskellDepends = [
          base cmdargs deepseq ghc ghc-boot hpc liquid-fixpoint located-base
@@ -129755,9 +130532,6 @@ self: {
        libraryHaskellDepends = [
          ansi-terminal base data-default stm terminal-size vty
        ];
-       executableHaskellDepends = [
-         ansi-terminal base data-default stm terminal-size vty
-       ];
        testHaskellDepends = [
          ansi-terminal base data-default hspec stm terminal-size vty
        ];
@@ -129875,15 +130649,15 @@ self: {
      }) {};
 
   "list-t-libcurl" = callPackage
-    ({ mkDerivation, base, base-prelude, bytestring, curlhs, either
-     , list-t, mtl-prelude, resource-pool, stm
+    ({ mkDerivation, base, base-prelude, bytestring, curlhs, list-t
+     , mtl-prelude, resource-pool, stm
      }:
      mkDerivation {
        pname = "list-t-libcurl";
-       version = "0.3.1";
-       sha256 = "0bfyz3k38ns8zak1lyyz4bkl6gd8yylwqpgwddxdpdbk9n4smj7h";
+       version = "0.3.3";
+       sha256 = "0sm1aflzh5ahnpyp0rbrx6c7pl53agd1170hffn3y9w45zp3dpq2";
        libraryHaskellDepends = [
-         base base-prelude bytestring curlhs either list-t mtl-prelude
+         base base-prelude bytestring curlhs list-t mtl-prelude
          resource-pool stm
        ];
        homepage = "https://github.com/nikita-volkov/list-t-libcurl";
@@ -130050,13 +130824,13 @@ self: {
      , concurrent-split, containers, data-accessor
      , data-accessor-transformers, event-list, explicit-exception, html
      , httpd-shed, midi, midi-alsa, network, network-uri, non-empty
-     , non-negative, parsec, pathtype, pretty, process, stm, stm-split
-     , strict, transformers, unix, utility-ht, wx, wxcore
+     , non-negative, parsec, pathtype, pretty, process, semigroups, stm
+     , stm-split, strict, transformers, unix, utility-ht, wx, wxcore
      }:
      mkDerivation {
        pname = "live-sequencer";
-       version = "0.0.6.1";
-       sha256 = "0g099sm4q7n0aiqc8qznqfcqvlnc25kzvz31qf49xblah89dzx0n";
+       version = "0.0.6.2";
+       sha256 = "12v1xfsi1cnnfakd5pzvligrpv5pfzl3vkr1gxvrigawipsj4b9f";
        isLibrary = true;
        isExecutable = true;
        enableSeparateDataOutput = true;
@@ -130065,8 +130839,8 @@ self: {
          alsa-core alsa-seq base bytestring cgi concurrent-split containers
          data-accessor data-accessor-transformers explicit-exception html
          httpd-shed midi midi-alsa network network-uri non-empty parsec
-         pathtype pretty process stm stm-split strict transformers unix
-         utility-ht wx wxcore
+         pathtype pretty process semigroups stm stm-split strict
+         transformers unix utility-ht wx wxcore
        ];
        homepage = "http://www.haskell.org/haskellwiki/Live-Sequencer";
        description = "Live coding of MIDI music";
@@ -130396,6 +131170,8 @@ self: {
        pname = "llvm-hs";
        version = "5.1.3";
        sha256 = "0swpc431w16g9yip5w67kd77ilc6yqqk526h7sl5n4sn7xlc9nnc";
+       revision = "1";
+       editedCabalFile = "0r8xgz6r2miw1l3az343jwz8f9jgzqywxnzl2xhanv05g3i462yh";
        setupHaskellDepends = [ base Cabal containers ];
        libraryHaskellDepends = [
          array attoparsec base bytestring containers exceptions llvm-hs-pure
@@ -130504,10 +131280,9 @@ self: {
      }) {};
 
   "llvm-pretty-bc-parser" = callPackage
-    ({ mkDerivation, abstract-par, array, base, bytestring, cereal
-     , containers, deepseq, directory, fgl, fgl-visualize, filepath
-     , llvm-pretty, monad-par, monadLib, pretty, process, random
-     , temporary, time, transformers, xml
+    ({ mkDerivation, array, base, bytestring, cereal, containers
+     , directory, fgl, fgl-visualize, filepath, llvm-pretty, monadLib
+     , pretty, process
      }:
      mkDerivation {
        pname = "llvm-pretty-bc-parser";
@@ -130520,9 +131295,8 @@ self: {
          pretty
        ];
        executableHaskellDepends = [
-         abstract-par array base bytestring cereal containers deepseq
-         directory fgl fgl-visualize filepath llvm-pretty monad-par monadLib
-         pretty process random temporary time transformers xml
+         array base bytestring cereal containers fgl fgl-visualize
+         llvm-pretty monadLib pretty
        ];
        testHaskellDepends = [
          base bytestring directory filepath llvm-pretty process
@@ -130533,16 +131307,17 @@ self: {
 
   "llvm-tf" = callPackage
     ({ mkDerivation, base, containers, enumset, fixed-length, llvm-ffi
-     , non-empty, storable-record, tfp, transformers, utility-ht
+     , non-empty, semigroups, storable-record, tfp, transformers
+     , utility-ht
      }:
      mkDerivation {
        pname = "llvm-tf";
-       version = "3.1.0.2";
-       sha256 = "165zz8mgygc5q8ck4s3jc26bi79pf6m42wr8g1xahr6vkjc1csjn";
+       version = "3.1.1";
+       sha256 = "0mhlz1jv81rl353qp0vbm39qz15yms9n0xlb0s27jj88yf66zks1";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
-         base containers enumset fixed-length llvm-ffi non-empty
+         base containers enumset fixed-length llvm-ffi non-empty semigroups
          storable-record tfp transformers utility-ht
        ];
        description = "Bindings to the LLVM compiler toolkit using type families";
@@ -130765,6 +131540,17 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "localization" = callPackage
+    ({ mkDerivation, base, containers, text, transformers }:
+     mkDerivation {
+       pname = "localization";
+       version = "1.0.0.20180213";
+       sha256 = "1dpmlmpmb4hbv9b5010l5fypjmas3hb4vfmcnfnrajm7wp7qzg2y";
+       libraryHaskellDepends = [ base containers text transformers ];
+       description = "Library for localization (l10n)";
+       license = stdenv.lib.licenses.gpl3;
+     }) {};
+
   "localize" = callPackage
     ({ mkDerivation, base, binary, bytestring, containers, data-default
      , directory, filepath, Glob, haskell-gettext, mtl, setlocale, text
@@ -130993,6 +131779,8 @@ self: {
        pname = "log-domain";
        version = "0.12";
        sha256 = "0zin3zgxrx8v69blqzkd5gjk0nmpmg58caqz2xa8qd4v1fjcp4bi";
+       revision = "1";
+       editedCabalFile = "0p2cmr9lpbakh4ml4mxgh4fhqmxdk78xpcnqblag1cllx9jrmk5b";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          base binary bytes cereal comonad deepseq distributive hashable
@@ -131272,31 +132060,8 @@ self: {
      }:
      mkDerivation {
        pname = "logging-effect";
-       version = "1.2.1";
-       sha256 = "1jjw2ach3mni7pnfcw29z2fw5vffhq8i8qh8sn4n4jcya2mfp7xd";
-       libraryHaskellDepends = [
-         async base exceptions free monad-control mtl semigroups stm
-         stm-delay text time transformers transformers-base wl-pprint-text
-       ];
-       benchmarkHaskellDepends = [
-         base bytestring criterion fast-logger lifted-async monad-logger
-         text time wl-pprint-text
-       ];
-       homepage = "https://github.com/ocharles/logging-effect";
-       description = "A mtl-style monad transformer for general purpose & compositional logging";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "logging-effect_1_2_2" = callPackage
-    ({ mkDerivation, async, base, bytestring, criterion, exceptions
-     , fast-logger, free, lifted-async, monad-control, monad-logger, mtl
-     , semigroups, stm, stm-delay, text, time, transformers
-     , transformers-base, wl-pprint-text
-     }:
-     mkDerivation {
-       pname = "logging-effect";
-       version = "1.2.2";
-       sha256 = "1p0czcwph777dncidsrn0nbrmhhv7f8c5ic86mnrkxj7hzym0dfw";
+       version = "1.2.3";
+       sha256 = "0822ifll474q3aqh5jjavhryrlz331p2zc5hh4zi47wviyfm8brk";
        libraryHaskellDepends = [
          async base exceptions free monad-control mtl semigroups stm
          stm-delay text time transformers transformers-base wl-pprint-text
@@ -131308,7 +132073,6 @@ self: {
        homepage = "https://github.com/ocharles/logging-effect";
        description = "A mtl-style monad transformer for general purpose & compositional logging";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "logging-effect-extra" = callPackage
@@ -131317,26 +132081,6 @@ self: {
      }:
      mkDerivation {
        pname = "logging-effect-extra";
-       version = "1.2.1";
-       sha256 = "0sk4wagknvspn45lll1sy5jx3vz1ljsjj3yabyx7cnlyf5bl3k61";
-       isLibrary = true;
-       isExecutable = true;
-       libraryHaskellDepends = [
-         base logging-effect logging-effect-extra-file
-         logging-effect-extra-handler wl-pprint-text
-       ];
-       executableHaskellDepends = [ base ];
-       homepage = "https://github.com/jship/logging-effect-extra#readme";
-       description = "Supplemental packages for `logging-effect`";
-       license = stdenv.lib.licenses.mit;
-     }) {};
-
-  "logging-effect-extra_1_2_2" = callPackage
-    ({ mkDerivation, base, logging-effect, logging-effect-extra-file
-     , logging-effect-extra-handler, wl-pprint-text
-     }:
-     mkDerivation {
-       pname = "logging-effect-extra";
        version = "1.2.2";
        sha256 = "0jra1fxz3880ds8pip1mlibiss8ihd1a9dpi3mv1py7lnc6ikjzw";
        isLibrary = true;
@@ -131349,7 +132093,6 @@ self: {
        homepage = "https://github.com/jship/logging-effect-extra#readme";
        description = "Supplemental packages for `logging-effect`";
        license = stdenv.lib.licenses.mit;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "logging-effect-extra-file" = callPackage
@@ -131358,25 +132101,6 @@ self: {
      }:
      mkDerivation {
        pname = "logging-effect-extra-file";
-       version = "1.1.1";
-       sha256 = "198mil2v6z13gv7m37lqhqpdfsgk3l231rm9anq9pj7z2x4xqcpw";
-       isLibrary = true;
-       isExecutable = true;
-       libraryHaskellDepends = [
-         base logging-effect template-haskell wl-pprint-text
-       ];
-       executableHaskellDepends = [ base logging-effect wl-pprint-text ];
-       homepage = "https://github.com/jship/logging-effect-extra#readme";
-       description = "TH splices to augment log messages with file info";
-       license = stdenv.lib.licenses.mit;
-     }) {};
-
-  "logging-effect-extra-file_1_1_2" = callPackage
-    ({ mkDerivation, base, logging-effect, template-haskell
-     , wl-pprint-text
-     }:
-     mkDerivation {
-       pname = "logging-effect-extra-file";
        version = "1.1.2";
        sha256 = "1dxi4rq734zmjf2ljlh771ivr45i2cwz94vym3gw38ji4s0k8cym";
        isLibrary = true;
@@ -131388,7 +132112,6 @@ self: {
        homepage = "https://github.com/jship/logging-effect-extra#readme";
        description = "TH splices to augment log messages with file info";
        license = stdenv.lib.licenses.mit;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "logging-effect-extra-handler" = callPackage
@@ -131397,25 +132120,6 @@ self: {
      }:
      mkDerivation {
        pname = "logging-effect-extra-handler";
-       version = "1.1.1";
-       sha256 = "1g73xyd1skh7paamnsia0x3cdayd34s12xvvxqaifm3wm19jy1rf";
-       isLibrary = true;
-       isExecutable = true;
-       libraryHaskellDepends = [
-         base exceptions logging-effect time wl-pprint-text
-       ];
-       executableHaskellDepends = [ base logging-effect wl-pprint-text ];
-       homepage = "https://github.com/jship/logging-effect-extra#readme";
-       description = "Handy logging handler combinators";
-       license = stdenv.lib.licenses.mit;
-     }) {};
-
-  "logging-effect-extra-handler_1_1_2" = callPackage
-    ({ mkDerivation, base, exceptions, logging-effect, time
-     , wl-pprint-text
-     }:
-     mkDerivation {
-       pname = "logging-effect-extra-handler";
        version = "1.1.2";
        sha256 = "1688vdlzyy8ikz2r96czyk0ganpv6h37x02sp930fmrj2qlwbvql";
        isLibrary = true;
@@ -131427,7 +132131,6 @@ self: {
        homepage = "https://github.com/jship/logging-effect-extra#readme";
        description = "Handy logging handler combinators";
        license = stdenv.lib.licenses.mit;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "logging-facade" = callPackage
@@ -132141,9 +132844,6 @@ self: {
          base containers FontyFruity gasp JuicyPixels lens linear
          lp-diagrams lucid-svg mtl optparse-applicative svg-tree text vector
        ];
-       executableHaskellDepends = [
-         base containers FontyFruity gasp lens lp-diagrams
-       ];
        description = "SVG Backend for lp-diagrams";
        license = "GPL";
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -132773,6 +133473,37 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "lxd-client_0_1_0_6" = callPackage
+    ({ mkDerivation, aeson, async, base, bimap, bytestring, connection
+     , containers, data-default, directory, either, exceptions, filepath
+     , hspec, hspec-core, http-api-data, http-client, http-client-tls
+     , http-media, http-types, mtl, network, random, semigroups, servant
+     , servant-client, text, tls, transformers, turtle, unix, uuid
+     , websockets, x509, x509-store, x509-validation
+     }:
+     mkDerivation {
+       pname = "lxd-client";
+       version = "0.1.0.6";
+       sha256 = "06w0m9h2xzkd6ynbb6kjvsaq8xj4zzfd64d31s83xb8al5pvnl4b";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         aeson async base bimap bytestring connection containers
+         data-default directory either exceptions filepath http-api-data
+         http-client http-client-tls http-media http-types mtl network
+         semigroups servant servant-client text tls transformers unix
+         websockets x509 x509-store x509-validation
+       ];
+       executableHaskellDepends = [ base ];
+       testHaskellDepends = [
+         base exceptions hspec hspec-core random text turtle uuid
+       ];
+       homepage = "https://github.com/hverr/haskell-lxd-client#readme";
+       description = "LXD client written in Haskell";
+       license = stdenv.lib.licenses.gpl3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "lxd-client-config" = callPackage
     ({ mkDerivation, aeson, base, containers, directory, filepath
      , HUnit, QuickCheck, test-framework, test-framework-hunit
@@ -132910,6 +133641,28 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "lzma-conduit_1_2_1" = callPackage
+    ({ mkDerivation, base, base-compat, bytestring, conduit, HUnit
+     , lzma, QuickCheck, resourcet, test-framework, test-framework-hunit
+     , test-framework-quickcheck2, transformers
+     }:
+     mkDerivation {
+       pname = "lzma-conduit";
+       version = "1.2.1";
+       sha256 = "0hm72da7xk9l3zxjh274yg444vf405djxqbkf3q3p2qhicmxlmg9";
+       libraryHaskellDepends = [
+         base bytestring conduit lzma resourcet transformers
+       ];
+       testHaskellDepends = [
+         base base-compat bytestring conduit HUnit QuickCheck resourcet
+         test-framework test-framework-hunit test-framework-quickcheck2
+       ];
+       homepage = "http://github.com/alphaHeavy/lzma-conduit";
+       description = "Conduit interface for lzma/xz compression";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "lzma-enumerator" = callPackage
     ({ mkDerivation, base, bindings-DSL, bytestring, enumerator, HUnit
      , lzma, mtl, QuickCheck, test-framework, test-framework-hunit
@@ -133042,18 +133795,18 @@ self: {
      }) {};
 
   "machinecell" = callPackage
-    ({ mkDerivation, base, free, hspec, mtl, profunctors, QuickCheck
-     , semigroups, transformers
+    ({ mkDerivation, base, doctest, free, hspec, mtl, profunctors
+     , QuickCheck, semigroups, transformers
      }:
      mkDerivation {
        pname = "machinecell";
-       version = "3.3.2";
-       sha256 = "0gjzn4i9iwclgpki599g52dvsipzc3iplpr8pz4d2s85nm54c9b6";
+       version = "4.0.0";
+       sha256 = "1wwrgd1ag104kdx97vii3rh9lj9lg1vg04rr98ldi2ikb90jbgwb";
        libraryHaskellDepends = [
          base free mtl profunctors semigroups transformers
        ];
        testHaskellDepends = [
-         base hspec mtl profunctors QuickCheck semigroups
+         base doctest hspec mtl profunctors QuickCheck semigroups
        ];
        homepage = "http://github.com/as-capabl/machinecell";
        description = "Arrow based stream transducers";
@@ -133070,8 +133823,8 @@ self: {
        pname = "machines";
        version = "0.6.3";
        sha256 = "1kxypm26xxd30979yrg94pnaaj3yfn180ri3y4z2xsm2m5iyiliz";
-       revision = "3";
-       editedCabalFile = "0cpy7gpli4xzlzmxfi2rpmlpb39x88zrsxrp6597lxb1cmvrixkh";
+       revision = "4";
+       editedCabalFile = "01j29cj62fvwj8fjpqqi2f8anrpqrfnfj5mb4zwpglawljw4kzdb";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          adjunctions base comonad containers distributive mtl pointed
@@ -133767,6 +134520,18 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "managed_1_0_6" = callPackage
+    ({ mkDerivation, base, transformers }:
+     mkDerivation {
+       pname = "managed";
+       version = "1.0.6";
+       sha256 = "1kbrw99yh5x5blykmx2n88mplbbi4ss1ij5j17b7asw6q0ihm9zi";
+       libraryHaskellDepends = [ base transformers ];
+       description = "A monad for managed values";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "manatee" = callPackage
     ({ mkDerivation, base, binary, cairo, containers, dbus-client
      , dbus-core, derive, directory, filepath, gtk, gtk-serialized-event
@@ -134346,6 +135111,23 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "mapquest-api" = callPackage
+    ({ mkDerivation, aeson, base, bytestring, exceptions, goggles, mtl
+     , req, text
+     }:
+     mkDerivation {
+       pname = "mapquest-api";
+       version = "0.3.1";
+       sha256 = "11bvba2yyif31srkpwc8hzgfks4528l4v2m9jgvyh5hqp4hr4cs3";
+       libraryHaskellDepends = [
+         aeson base bytestring exceptions goggles mtl req text
+       ];
+       homepage = "https://github.com/ocramz/mapquest-api";
+       description = "Bindings to the MapQuest API";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "marionetta" = callPackage
     ({ mkDerivation, base, containers, gloss, mtl, splines, vector
      , vector-space
@@ -134580,10 +135362,10 @@ self: {
      }) {};
 
   "marmalade-upload" = callPackage
-    ({ mkDerivation, aeson, base, bytestring, Cabal, data-default
-     , directory, exceptions, filepath, http-client, http-client-tls
-     , http-types, keyring, mtl, network, optparse-applicative, process
-     , shake, split, tasty, tasty-hunit, text, transformers, zip-archive
+    ({ mkDerivation, aeson, base, bytestring, data-default, directory
+     , exceptions, filepath, http-client, http-client-tls, http-types
+     , keyring, mtl, network, optparse-applicative, tasty, tasty-hunit
+     , text, transformers
      }:
      mkDerivation {
        pname = "marmalade-upload";
@@ -134596,9 +135378,8 @@ self: {
          http-types mtl network text transformers
        ];
        executableHaskellDepends = [
-         aeson base bytestring Cabal data-default directory filepath keyring
-         optparse-applicative process shake split text transformers
-         zip-archive
+         aeson base bytestring data-default directory filepath keyring
+         optparse-applicative text transformers
        ];
        testHaskellDepends = [
          aeson base exceptions tasty tasty-hunit text transformers
@@ -134716,8 +135497,8 @@ self: {
 
   "marxup" = callPackage
     ({ mkDerivation, base, configurator, containers, directory, dlist
-     , filepath, graphviz, haskell-src-exts, labeled-tree, lens
-     , lp-diagrams, mtl, parsek, pretty, process, text
+     , filepath, haskell-src-exts, labeled-tree, lens, lp-diagrams, mtl
+     , parsek, pretty, process, text
      }:
      mkDerivation {
        pname = "marxup";
@@ -134731,7 +135512,7 @@ self: {
          lens lp-diagrams mtl process text
        ];
        executableHaskellDepends = [
-         base configurator dlist graphviz lens lp-diagrams parsek pretty
+         base configurator dlist parsek pretty
        ];
        description = "Markup language preprocessor for Haskell";
        license = stdenv.lib.licenses.gpl2;
@@ -134761,6 +135542,44 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "massiv" = callPackage
+    ({ mkDerivation, base, data-default, data-default-class, deepseq
+     , ghc-prim, hspec, primitive, QuickCheck, safe-exceptions, vector
+     }:
+     mkDerivation {
+       pname = "massiv";
+       version = "0.1.0.0";
+       sha256 = "1hy87l8jv06jmgws7r28qh44ja1a4swpaki9z8dn9lviddlhiz3d";
+       libraryHaskellDepends = [
+         base data-default-class deepseq ghc-prim primitive vector
+       ];
+       testHaskellDepends = [
+         base data-default deepseq hspec QuickCheck safe-exceptions vector
+       ];
+       homepage = "https://github.com/lehins/massiv";
+       description = "Massiv (Массив) is an Array Library";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
+  "massiv-io" = callPackage
+    ({ mkDerivation, base, bytestring, data-default, deepseq, directory
+     , filepath, JuicyPixels, massiv, netpbm, process, vector
+     }:
+     mkDerivation {
+       pname = "massiv-io";
+       version = "0.1.0.0";
+       sha256 = "1qj94ypn5yzl3pjdnpddjv926d1wjcvm1n673mg4i0x5pr71w7lw";
+       revision = "1";
+       editedCabalFile = "1k6hg12q6m6gi6w6km04r6hx7zq7xfdhxz90arlm1izag3dv1ic2";
+       libraryHaskellDepends = [
+         base bytestring data-default deepseq directory filepath JuicyPixels
+         massiv netpbm process vector
+       ];
+       homepage = "https://github.com/lehins/massiv";
+       description = "Import/export of Image files into massiv Arrays";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "master-plan" = callPackage
     ({ mkDerivation, base, diagrams, diagrams-lib, diagrams-rasterific
      , hspec, megaparsec, mtl, optparse-applicative, QuickCheck
@@ -135109,28 +135928,30 @@ self: {
 
   "matterhorn" = callPackage
     ({ mkDerivation, aeson, aspell-pipe, async, base, base-compat
-     , brick, bytestring, cheapskate, checkers, config-ini, connection
-     , containers, directory, filepath, gitrev, hashable, Hclip
-     , mattermost-api, mattermost-api-qc, microlens-platform, mtl
-     , process, quickcheck-text, semigroups, skylighting, stm, stm-delay
-     , strict, string-conversions, tasty, tasty-hunit, tasty-quickcheck
-     , temporary, text, text-zipper, time, timezone-olson
-     , timezone-series, transformers, Unique, unix, unordered-containers
-     , utf8-string, vector, vty, word-wrap, xdg-basedir
+     , brick, brick-skylighting, bytestring, cheapskate, checkers
+     , config-ini, connection, containers, directory, filepath, gitrev
+     , hashable, Hclip, mattermost-api, mattermost-api-qc
+     , microlens-platform, mtl, process, quickcheck-text, semigroups
+     , skylighting, stm, stm-delay, strict, string-conversions, tasty
+     , tasty-hunit, tasty-quickcheck, temporary, text, text-zipper, time
+     , timezone-olson, timezone-series, transformers, Unique, unix
+     , unordered-containers, utf8-string, vector, vty, word-wrap
+     , xdg-basedir
      }:
      mkDerivation {
        pname = "matterhorn";
-       version = "40600.0.0";
-       sha256 = "0niha43l1p00af3qjkz5j43ksdl0a0sgagra584c8j34cl1f9akv";
+       version = "40600.1.0";
+       sha256 = "1cxbvs6w2iv4n2ig3hfy79gwcc76mv48q16r8w4jag0dswv5ry92";
        isLibrary = false;
        isExecutable = true;
        executableHaskellDepends = [
-         aeson aspell-pipe async base base-compat brick bytestring
-         cheapskate config-ini connection containers directory filepath
-         gitrev hashable Hclip mattermost-api microlens-platform mtl process
-         semigroups skylighting stm stm-delay strict temporary text
-         text-zipper time timezone-olson timezone-series transformers unix
-         unordered-containers utf8-string vector vty word-wrap xdg-basedir
+         aeson aspell-pipe async base base-compat brick brick-skylighting
+         bytestring cheapskate config-ini connection containers directory
+         filepath gitrev hashable Hclip mattermost-api microlens-platform
+         mtl process semigroups skylighting stm stm-delay strict temporary
+         text text-zipper time timezone-olson timezone-series transformers
+         unix unordered-containers utf8-string vector vty word-wrap
+         xdg-basedir
        ];
        testHaskellDepends = [
          base base-compat brick bytestring cheapskate checkers config-ini
@@ -135155,8 +135976,8 @@ self: {
      }:
      mkDerivation {
        pname = "mattermost-api";
-       version = "40600.0.0";
-       sha256 = "0s27n9a7s6bgbara2rzh689234ykl3vfpm84yg1nvc61wsrxbkql";
+       version = "40600.1.0";
+       sha256 = "00c2vbf73gg14cpjdbnly0h8dszys31n5ymmf0c43zgrv3z5wb4i";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -135164,9 +135985,6 @@ self: {
          HTTP memory microlens microlens-th network-uri pretty-show process
          stm template-haskell text time unordered-containers websockets
        ];
-       executableHaskellDepends = [
-         aeson base connection pretty-show process text unordered-containers
-       ];
        testHaskellDepends = [
          aeson base containers HUnit mtl pretty-show stm tasty tasty-hunit
          text unordered-containers
@@ -135182,8 +136000,8 @@ self: {
      }:
      mkDerivation {
        pname = "mattermost-api-qc";
-       version = "40600.0.0";
-       sha256 = "0pfmf4ja4a7vc9bnr4kc604j0b8dmcm1ggddg4m64jf355mw6nxm";
+       version = "40600.1.0";
+       sha256 = "1n2gfq4f0lmb3hbnja49j70ryrgmwkr0h69zwls3zcd7mdx5v1fr";
        libraryHaskellDepends = [
          base containers mattermost-api QuickCheck text time
        ];
@@ -135360,7 +136178,7 @@ self: {
 
   "mbox-tools" = callPackage
     ({ mkDerivation, base, bytestring, codec-mbox, containers, fclabels
-     , hsemail, mtl, parsec, process, pureMD5, random
+     , hsemail, mtl, parsec, process, pureMD5
      }:
      mkDerivation {
        pname = "mbox-tools";
@@ -135370,7 +136188,7 @@ self: {
        isExecutable = true;
        executableHaskellDepends = [
          base bytestring codec-mbox containers fclabels hsemail mtl parsec
-         process pureMD5 random
+         process pureMD5
        ];
        homepage = "https://github.com/np/mbox-tools";
        description = "A collection of tools to process mbox files";
@@ -135522,7 +136340,7 @@ self: {
      }) {};
 
   "mcpi" = callPackage
-    ({ mkDerivation, base, network, pipes, split, transformers }:
+    ({ mkDerivation, base, network, split, transformers }:
      mkDerivation {
        pname = "mcpi";
        version = "0.0.1.2";
@@ -135530,7 +136348,7 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base network split transformers ];
-       executableHaskellDepends = [ base network pipes transformers ];
+       executableHaskellDepends = [ base transformers ];
        homepage = "https://github.com/DougBurke/hmcpi";
        description = "Connect to MineCraft running on a Raspberry PI";
        license = stdenv.lib.licenses.publicDomain;
@@ -136019,17 +136837,19 @@ self: {
      }) {};
 
   "mellon-core" = callPackage
-    ({ mkDerivation, async, base, doctest, hlint, hspec, mtl
+    ({ mkDerivation, async, base, doctest, hspec, mtl, protolude
      , QuickCheck, quickcheck-instances, time, transformers
      }:
      mkDerivation {
        pname = "mellon-core";
-       version = "0.8.0.4";
-       sha256 = "03gh3ks6k3y11sga15bnknqw7j29kfhgw8zvfz87vgw5xlsva3j2";
-       libraryHaskellDepends = [ async base mtl time transformers ];
+       version = "0.8.0.6";
+       sha256 = "07dhbqw0x7vbwzkhf1wh083h4b8xrw8sv75db2s72zgjrh8igpfm";
+       libraryHaskellDepends = [
+         async base mtl protolude time transformers
+       ];
        testHaskellDepends = [
-         async base doctest hlint hspec mtl QuickCheck quickcheck-instances
-         time transformers
+         async base doctest hspec mtl protolude QuickCheck
+         quickcheck-instances time transformers
        ];
        homepage = "https://github.com/quixoftic/mellon#readme";
        description = "Control physical access devices";
@@ -136038,13 +136858,12 @@ self: {
      }) {};
 
   "mellon-gpio" = callPackage
-    ({ mkDerivation, base, hlint, hpio, mellon-core }:
+    ({ mkDerivation, base, hpio, mellon-core, protolude }:
      mkDerivation {
        pname = "mellon-gpio";
-       version = "0.8.0.4";
-       sha256 = "0b12wvv11ny3rdrd8wg236zn8yy3szm85n7qjdyiiznx2jf33rm7";
-       libraryHaskellDepends = [ base hpio mellon-core ];
-       testHaskellDepends = [ base hlint ];
+       version = "0.8.0.6";
+       sha256 = "08mr37wmg1paigbhs1wv7rpdxkhy2jiba8nd22rg1lhscc04k7g1";
+       libraryHaskellDepends = [ base hpio mellon-core protolude ];
        homepage = "https://github.com/quixoftic/mellon#readme";
        description = "GPIO support for mellon";
        license = stdenv.lib.licenses.bsd3;
@@ -136053,35 +136872,35 @@ self: {
 
   "mellon-web" = callPackage
     ({ mkDerivation, aeson, aeson-pretty, base, bytestring, doctest
-     , exceptions, hlint, hpio, hspec, hspec-wai, http-client
-     , http-client-tls, http-types, lens, lucid, mellon-core
-     , mellon-gpio, mtl, network, optparse-applicative, QuickCheck
-     , quickcheck-instances, servant, servant-client, servant-docs
-     , servant-lucid, servant-server, servant-swagger
-     , servant-swagger-ui, swagger2, text, time, transformers, wai
-     , wai-extra, warp
+     , exceptions, hpio, hspec, hspec-wai, http-client, http-client-tls
+     , http-types, lens, lucid, mellon-core, mellon-gpio, mtl, network
+     , optparse-applicative, protolude, QuickCheck, quickcheck-instances
+     , servant, servant-client, servant-docs, servant-lucid
+     , servant-server, servant-swagger, servant-swagger-ui, swagger2
+     , text, time, transformers, wai, wai-extra, warp
      }:
      mkDerivation {
        pname = "mellon-web";
-       version = "0.8.0.4";
-       sha256 = "1fyd8vkdym9rm54dbcnn9821jdmbvdyl942339m6prnc2188hkcc";
+       version = "0.8.0.6";
+       sha256 = "0hfb2gkfn9kdg8a5n6l8c7jky8d4545qqlpdzl2qv63500nr4wz3";
        isLibrary = true;
        isExecutable = true;
+       enableSeparateDataOutput = true;
        libraryHaskellDepends = [
          aeson aeson-pretty base bytestring http-client http-types lens
-         lucid mellon-core servant servant-client servant-docs servant-lucid
-         servant-server servant-swagger servant-swagger-ui swagger2 text
-         time transformers wai warp
+         lucid mellon-core protolude servant servant-client servant-docs
+         servant-lucid servant-server servant-swagger servant-swagger-ui
+         swagger2 text time transformers wai warp
        ];
        executableHaskellDepends = [
          base bytestring exceptions hpio http-client http-client-tls
          http-types mellon-core mellon-gpio mtl network optparse-applicative
-         servant-client time transformers warp
+         protolude servant-client time transformers warp
        ];
        testHaskellDepends = [
-         aeson aeson-pretty base bytestring doctest hlint hspec hspec-wai
-         http-client http-types lens lucid mellon-core network QuickCheck
-         quickcheck-instances servant servant-client servant-docs
+         aeson aeson-pretty base bytestring doctest hspec hspec-wai
+         http-client http-types lens lucid mellon-core network protolude
+         QuickCheck quickcheck-instances servant servant-client servant-docs
          servant-lucid servant-server servant-swagger servant-swagger-ui
          swagger2 text time transformers wai wai-extra warp
        ];
@@ -136137,8 +136956,8 @@ self: {
 
   "memcache-conduit" = callPackage
     ({ mkDerivation, attoparsec, attoparsec-binary, base, bytestring
-     , conduit, conduit-extra, containers, hashtables, memcache-haskell
-     , monad-control, mtl, network, resourcet, split, stm, transformers
+     , conduit, conduit-extra, memcache-haskell, mtl, network, resourcet
+     , split
      }:
      mkDerivation {
        pname = "memcache-conduit";
@@ -136150,20 +136969,14 @@ self: {
          attoparsec attoparsec-binary base bytestring conduit conduit-extra
          memcache-haskell mtl network resourcet split
        ];
-       executableHaskellDepends = [
-         base bytestring conduit conduit-extra containers hashtables
-         memcache-haskell monad-control mtl network resourcet stm
-         transformers
-       ];
        description = "Conduit library for memcache procotol";
        license = stdenv.lib.licenses.mit;
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "memcache-haskell" = callPackage
-    ({ mkDerivation, attoparsec, base, bytestring, conduit-extra
-     , containers, hashable, hashtables, HUnit, mtl, network, QuickCheck
-     , resourcet, split, stm, test-framework, test-framework-hunit
+    ({ mkDerivation, attoparsec, base, bytestring, hashable, HUnit
+     , network, QuickCheck, split, test-framework, test-framework-hunit
      , test-framework-quickcheck2, test-framework-th, transformers
      }:
      mkDerivation {
@@ -136175,10 +136988,6 @@ self: {
        libraryHaskellDepends = [
          attoparsec base bytestring hashable network split transformers
        ];
-       executableHaskellDepends = [
-         base bytestring conduit-extra containers hashtables mtl resourcet
-         stm transformers
-       ];
        testHaskellDepends = [
          base bytestring HUnit network QuickCheck split test-framework
          test-framework-hunit test-framework-quickcheck2 test-framework-th
@@ -136929,12 +137738,12 @@ self: {
     ({ mkDerivation, base, primitive, vector }:
      mkDerivation {
        pname = "microgroove";
-       version = "0.1.0.0";
-       sha256 = "0mzgx3ljf7k7b0c6kdryamcyvahhr2q1j836ghhsk58r4j67qh13";
+       version = "0.2.1.0";
+       sha256 = "1dfkiiiksb4wnf6kgxmla37w1xmmxpzim4ribjckvn58pd2hn2a0";
        libraryHaskellDepends = [ base primitive vector ];
-       homepage = "https://github.com/daig/microgroove";
+       homepage = "https://github.com/daig/microgroove#readme";
        description = "Array-backed extensible records";
-       license = stdenv.lib.licenses.bsd3;
+       license = stdenv.lib.licenses.mit;
      }) {};
 
   "microlens" = callPackage
@@ -137208,6 +138017,30 @@ self: {
        license = "GPL";
      }) {};
 
+  "midi_0_2_2_2" = callPackage
+    ({ mkDerivation, base, binary, bytestring, event-list
+     , explicit-exception, monoid-transformer, non-negative, QuickCheck
+     , random, semigroups, transformers, utility-ht
+     }:
+     mkDerivation {
+       pname = "midi";
+       version = "0.2.2.2";
+       sha256 = "0fv9980k35qv9qk73g2mp88xvhchyq0lq37cl7i26gx4f64vaz6y";
+       libraryHaskellDepends = [
+         base binary bytestring event-list explicit-exception
+         monoid-transformer non-negative QuickCheck random semigroups
+         transformers utility-ht
+       ];
+       testHaskellDepends = [
+         base bytestring event-list explicit-exception non-negative
+         QuickCheck transformers utility-ht
+       ];
+       homepage = "http://www.haskell.org/haskellwiki/MIDI";
+       description = "Handling of MIDI messages and files";
+       license = "GPL";
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "midi-alsa" = callPackage
     ({ mkDerivation, alsa-seq, base, data-accessor, midi, utility-ht }:
      mkDerivation {
@@ -137477,30 +138310,6 @@ self: {
      }:
      mkDerivation {
        pname = "milena";
-       version = "0.5.2.0";
-       sha256 = "06gx1j9bxzxnagsymgr0nzhs1s6jsr14mhh2qx38h85n5g12zpvb";
-       libraryHaskellDepends = [
-         base bytestring cereal containers digest lens lifted-base
-         monad-control mtl murmur-hash network random resource-pool
-         semigroups transformers zlib
-       ];
-       testHaskellDepends = [
-         base bytestring lens mtl network QuickCheck semigroups tasty
-         tasty-hspec tasty-quickcheck
-       ];
-       homepage = "https://github.com/adamflott/milena.git#readme";
-       description = "A Kafka client for Haskell";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "milena_0_5_2_1" = callPackage
-    ({ mkDerivation, base, bytestring, cereal, containers, digest, lens
-     , lifted-base, monad-control, mtl, murmur-hash, network, QuickCheck
-     , random, resource-pool, semigroups, tasty, tasty-hspec
-     , tasty-quickcheck, transformers, zlib
-     }:
-     mkDerivation {
-       pname = "milena";
        version = "0.5.2.1";
        sha256 = "1mylkqp8vha9gq7li5cir5h3i27zb573alxgxnvr1y938z2nimf2";
        libraryHaskellDepends = [
@@ -137515,7 +138324,6 @@ self: {
        homepage = "https://github.com/adamflott/milena.git#readme";
        description = "A Kafka client for Haskell";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "mime" = callPackage
@@ -138058,15 +138866,15 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "miso_0_12_0_0" = callPackage
+  "miso_0_13_0_0" = callPackage
     ({ mkDerivation, aeson, base, bytestring, containers, http-api-data
      , http-types, lucid, network-uri, servant, servant-lucid, text
      , transformers, vector
      }:
      mkDerivation {
        pname = "miso";
-       version = "0.12.0.0";
-       sha256 = "08d50apwcyym4crdnly97j1vwl85p9a5fr606x1mj8729pd0pwjb";
+       version = "0.13.0.0";
+       sha256 = "1sv8q5f1nkvsxk365k8njmaggi1hyp47q539is2n2xhwmsysxwla";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -138283,7 +139091,7 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "mmark_0_0_5_4" = callPackage
+  "mmark_0_0_5_5" = callPackage
     ({ mkDerivation, aeson, base, case-insensitive, containers
      , criterion, data-default-class, deepseq, dlist, email-validate
      , foldl, hashable, hspec, hspec-megaparsec, html-entity-map, lucid
@@ -138293,8 +139101,8 @@ self: {
      }:
      mkDerivation {
        pname = "mmark";
-       version = "0.0.5.4";
-       sha256 = "0qzw37cj7481vpix8wfgv3ljv10jinfymjpcbzxi4m67fxxjmsf7";
+       version = "0.0.5.5";
+       sha256 = "1j1ci1zwnp7q6bnk1cqz5g2zx4c02yr8s87v9wf8j898bky8cgwj";
        enableSeparateDataOutput = true;
        libraryHaskellDepends = [
          aeson base case-insensitive containers data-default-class deepseq
@@ -138790,6 +139598,30 @@ self: {
        license = stdenv.lib.licenses.asl20;
      }) {};
 
+  "moesocks_1_0_0_44" = callPackage
+    ({ mkDerivation, aeson, async, attoparsec, base, binary, bytestring
+     , containers, cryptohash, hslogger, HsOpenSSL, iproute, lens
+     , lens-aeson, mtl, network, optparse-applicative, random, stm
+     , strict, text, time, transformers, unordered-containers
+     }:
+     mkDerivation {
+       pname = "moesocks";
+       version = "1.0.0.44";
+       sha256 = "1j7181sjj5p6r419z9j8b8ikshhcgm2zwfbl4f1brbpyvwvs4ddz";
+       isLibrary = false;
+       isExecutable = true;
+       executableHaskellDepends = [
+         aeson async attoparsec base binary bytestring containers cryptohash
+         hslogger HsOpenSSL iproute lens lens-aeson mtl network
+         optparse-applicative random stm strict text time transformers
+         unordered-containers
+       ];
+       homepage = "https://github.com/nfjinjing/moesocks";
+       description = "A functional firewall killer";
+       license = stdenv.lib.licenses.asl20;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "mohws" = callPackage
     ({ mkDerivation, base, bytestring, containers, data-accessor
      , directory, explicit-exception, filepath, html, HTTP, network
@@ -139324,15 +140156,15 @@ self: {
      }:
      mkDerivation {
        pname = "monad-logger-prefix";
-       version = "0.1.6";
-       sha256 = "14jdx72wx6yavjjaaxx5p270vy5cdshynfbp5ss4mdi3h84rfxpv";
+       version = "0.1.7";
+       sha256 = "0k8npx31vqck3zz1kirv36ljp6i9sy7banj0xkcpw8z7siqx64vd";
        libraryHaskellDepends = [
          base exceptions monad-control monad-logger mtl resourcet text
          transformers transformers-base
        ];
        testHaskellDepends = [ base doctest Glob hspec QuickCheck ];
        benchmarkHaskellDepends = [ base criterion monad-logger ];
-       homepage = "https://github.com/sellerlabs/monad-logger-prefix#readme";
+       homepage = "https://github.com/parsonsmatt/monad-logger-prefix#readme";
        description = "Add prefixes to your monad-logger output";
        license = stdenv.lib.licenses.asl20;
      }) {};
@@ -139683,8 +140515,8 @@ self: {
     ({ mkDerivation, base, mmorph, mtl, transformers }:
      mkDerivation {
        pname = "monad-resumption";
-       version = "0.1.2.0";
-       sha256 = "09yz5cbvjlmqdlr25adxggpdz52jxyryyyrzix1pkdjr6aqpidkr";
+       version = "0.1.3.0";
+       sha256 = "0zi4p8v02shw0m471xsq1d3wbskz6jd2j92wpdi3qcd8fx4i283q";
        libraryHaskellDepends = [ base mmorph mtl transformers ];
        homepage = "https://github.com/igraves/resumption_monads";
        description = "Resumption and reactive resumption monads for Haskell";
@@ -140154,6 +140986,7 @@ self: {
        ];
        description = "A simple and fast logging monad";
        license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "monadoid" = callPackage
@@ -140216,10 +141049,9 @@ self: {
      }) {};
 
   "monarch" = callPackage
-    ({ mkDerivation, base, binary, bytestring, containers, criterion
-     , doctest, hspec, lifted-base, monad-control, mtl, network
-     , pool-conduit, stm, tokyotyrant-haskell, transformers
-     , transformers-base
+    ({ mkDerivation, base, binary, bytestring, containers, doctest
+     , lifted-base, monad-control, mtl, network, pool-conduit, stm
+     , transformers, transformers-base
      }:
      mkDerivation {
        pname = "monarch";
@@ -140229,12 +141061,7 @@ self: {
          base binary bytestring containers lifted-base monad-control mtl
          network pool-conduit stm transformers transformers-base
        ];
-       testHaskellDepends = [
-         base bytestring doctest hspec transformers
-       ];
-       benchmarkHaskellDepends = [
-         base bytestring criterion tokyotyrant-haskell
-       ];
+       testHaskellDepends = [ base doctest ];
        homepage = "https://github.com/notogawa/monarch";
        description = "Monadic interface for TokyoTyrant";
        license = stdenv.lib.licenses.bsd3;
@@ -140301,8 +141128,8 @@ self: {
      }:
      mkDerivation {
        pname = "mongoDB";
-       version = "2.3.0.1";
-       sha256 = "1snr144yk05p5l9ck5gfs4zawg2l8fd8slmzxsrd29w2x6pk7iqv";
+       version = "2.3.0.2";
+       sha256 = "10gl9116hkjvm12ysgr1pi1vlk4d9jbkxgrcql6qhyvpsgv7s7bd";
        libraryHaskellDepends = [
          array base base16-bytestring base64-bytestring binary bson
          bytestring conduit conduit-extra containers cryptohash
@@ -140322,7 +141149,7 @@ self: {
        license = stdenv.lib.licenses.asl20;
      }) {};
 
-  "mongoDB_2_3_0_2" = callPackage
+  "mongoDB_2_3_0_4" = callPackage
     ({ mkDerivation, array, base, base16-bytestring, base64-bytestring
      , binary, bson, bytestring, conduit, conduit-extra, containers
      , criterion, cryptohash, data-default-class, hashtables, hspec
@@ -140332,8 +141159,8 @@ self: {
      }:
      mkDerivation {
        pname = "mongoDB";
-       version = "2.3.0.2";
-       sha256 = "10gl9116hkjvm12ysgr1pi1vlk4d9jbkxgrcql6qhyvpsgv7s7bd";
+       version = "2.3.0.4";
+       sha256 = "0qxwk154wd2ir3z7qjn8b7p6lx34ga5r7gcpmf4yp1z8vzsbxn57";
        libraryHaskellDepends = [
          array base base16-bytestring base64-bytestring binary bson
          bytestring conduit conduit-extra containers cryptohash
@@ -140344,9 +141171,9 @@ self: {
        testHaskellDepends = [ base hspec mtl old-locale text time ];
        benchmarkHaskellDepends = [
          array base base16-bytestring base64-bytestring binary bson
-         bytestring containers criterion cryptohash hashtables lifted-base
-         monad-control mtl network nonce parsec random random-shuffle text
-         transformers-base
+         bytestring containers criterion cryptohash data-default-class
+         hashtables lifted-base monad-control mtl network nonce parsec
+         random random-shuffle text transformers-base
        ];
        homepage = "https://github.com/mongodb-haskell/mongodb";
        description = "Driver (client) for MongoDB, a free, scalable, fast, document DBMS";
@@ -140600,6 +141427,18 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "monoid-transformer_0_0_4" = callPackage
+    ({ mkDerivation, base, semigroups }:
+     mkDerivation {
+       pname = "monoid-transformer";
+       version = "0.0.4";
+       sha256 = "1243r77m5ywphwyhw7kn9vb2ha5m5zj375bd61fprdfiwi3z3as3";
+       libraryHaskellDepends = [ base semigroups ];
+       description = "Monoid counterparts to some ubiquitous monad transformers";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "monoidal-containers" = callPackage
     ({ mkDerivation, base, containers, deepseq, hashable, lens, newtype
      , unordered-containers
@@ -140910,6 +141749,39 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "morte_1_6_15" = callPackage
+    ({ mkDerivation, alex, array, base, binary, code-page, containers
+     , criterion, deepseq, Earley, http-client, http-client-tls
+     , microlens, microlens-mtl, mtl, optparse-applicative, pipes
+     , QuickCheck, system-fileio, system-filepath, tasty, tasty-hunit
+     , tasty-quickcheck, text, text-format, transformers
+     }:
+     mkDerivation {
+       pname = "morte";
+       version = "1.6.15";
+       sha256 = "04s58nb4ycfp679saj50wmxgszjrp479dp378wd982534jrglxyh";
+       isLibrary = true;
+       isExecutable = true;
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         array base binary containers deepseq Earley http-client
+         http-client-tls microlens microlens-mtl pipes system-fileio
+         system-filepath text text-format transformers
+       ];
+       libraryToolDepends = [ alex ];
+       executableHaskellDepends = [
+         base code-page optparse-applicative text text-format
+       ];
+       testHaskellDepends = [
+         base mtl QuickCheck system-filepath tasty tasty-hunit
+         tasty-quickcheck text transformers
+       ];
+       benchmarkHaskellDepends = [ base criterion system-filepath text ];
+       description = "A bare-bones calculus of constructions";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "mosaico-lib" = callPackage
     ({ mkDerivation, base, base-unicode-symbols, colour, diagrams-cairo
      , diagrams-core, diagrams-gtk, diagrams-lib, glib, gtk, JuicyPixels
@@ -141858,8 +142730,8 @@ self: {
     ({ mkDerivation, base, doctest }:
      mkDerivation {
        pname = "multi-instance";
-       version = "0.0.0.1";
-       sha256 = "09kqgh966z2n54mkrm1hbllfl8cws6s8caqlld1p8z502axmy5sk";
+       version = "0.0.0.2";
+       sha256 = "11r7wy143zy9drjrz7l57bdsbaj2fd3sjwbiz7pcmcdr1bxxga63";
        libraryHaskellDepends = [ base ];
        testHaskellDepends = [ base doctest ];
        homepage = "https://github.com/chris-martin/multi-instance#readme";
@@ -142752,26 +143624,6 @@ self: {
      }) {};
 
   "mutable-containers" = callPackage
-    ({ mkDerivation, base, containers, criterion, ghc-prim, hspec
-     , mono-traversable, primitive, QuickCheck, vector
-     }:
-     mkDerivation {
-       pname = "mutable-containers";
-       version = "0.3.3";
-       sha256 = "1svwa54prfdmhdlmv118lnkwv3jx3rx7v5x30wbdsy39n75kjyks";
-       libraryHaskellDepends = [
-         base containers ghc-prim mono-traversable primitive vector
-       ];
-       testHaskellDepends = [
-         base containers hspec primitive QuickCheck vector
-       ];
-       benchmarkHaskellDepends = [ base containers criterion ];
-       homepage = "https://github.com/snoyberg/mono-traversable";
-       description = "Abstactions and concrete implementations of mutable containers";
-       license = stdenv.lib.licenses.mit;
-     }) {};
-
-  "mutable-containers_0_3_4" = callPackage
     ({ mkDerivation, base, containers, gauge, ghc-prim, hspec
      , mono-traversable, primitive, QuickCheck, vector
      }:
@@ -142789,7 +143641,6 @@ self: {
        homepage = "https://github.com/snoyberg/mono-traversable#readme";
        description = "Abstactions and concrete implementations of mutable containers";
        license = stdenv.lib.licenses.mit;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "mutable-iter" = callPackage
@@ -142833,10 +143684,10 @@ self: {
     ({ mkDerivation, base, safe-exceptions }:
      mkDerivation {
        pname = "mvar-lock";
-       version = "0.1.0.0";
-       sha256 = "1j38hjj7nqz9f8qs0a2kvgh9v80l7ip16fm9qjl675hj479z668p";
+       version = "0.1.0.1";
+       sha256 = "0kdf7811kxwfj032d8g18za0nn9jlssh7dpvvr8kzjk01b77804r";
        libraryHaskellDepends = [ base safe-exceptions ];
-       homepage = "https://github.com/chris-martin/haskell-libraries";
+       homepage = "https://github.com/chris-martin/mvar-lock";
        description = "A trivial lock based on MVar";
        license = stdenv.lib.licenses.asl20;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -142918,10 +143769,7 @@ self: {
      }) {};
 
   "mwc-random" = callPackage
-    ({ mkDerivation, base, HUnit, math-functions, primitive, QuickCheck
-     , statistics, test-framework, test-framework-hunit
-     , test-framework-quickcheck2, time, vector
-     }:
+    ({ mkDerivation, base, math-functions, primitive, time, vector }:
      mkDerivation {
        pname = "mwc-random";
        version = "0.13.6.0";
@@ -142929,10 +143777,6 @@ self: {
        libraryHaskellDepends = [
          base math-functions primitive time vector
        ];
-       testHaskellDepends = [
-         base HUnit QuickCheck statistics test-framework
-         test-framework-hunit test-framework-quickcheck2 vector
-       ];
        doCheck = false;
        homepage = "https://github.com/bos/mwc-random";
        description = "Fast, high quality pseudo random number generation";
@@ -143004,6 +143848,32 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "mxnet-nn" = callPackage
+    ({ mkDerivation, attoparsec, attoparsec-binary, base, bytestring
+     , exceptions, ghc-prim, lens, mmorph, mtl, mxnet, resourcet
+     , streaming, streaming-bytestring, streaming-utils
+     , unordered-containers, vector
+     }:
+     mkDerivation {
+       pname = "mxnet-nn";
+       version = "0.0.1.1";
+       sha256 = "16clpl3sn4cf106hjigsyhgh15l9269yg838qarvbpigppkgb2sv";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         base lens mtl mxnet resourcet unordered-containers vector
+       ];
+       executableHaskellDepends = [
+         attoparsec attoparsec-binary base bytestring exceptions ghc-prim
+         mmorph mtl mxnet resourcet streaming streaming-bytestring
+         streaming-utils unordered-containers vector
+       ];
+       homepage = "http://github.com/pierric/mxnet-nn";
+       description = "Train a neural network with MXNet in Haskell";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "mxnet-nnvm" = callPackage
     ({ mkDerivation, base, c2hs, c2hs-extra, mxnet }:
      mkDerivation {
@@ -143487,33 +144357,38 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
-  "nakadi-client_0_4_1_0" = callPackage
+  "nakadi-client_0_5_0_0" = callPackage
     ({ mkDerivation, aeson, aeson-casing, async, base, bytestring
      , classy-prelude, conduit, conduit-combinators, conduit-extra
-     , containers, hashable, http-client, http-client-tls, http-conduit
-     , http-types, iso8601-time, lens, lens-aeson, monad-logger, mtl
+     , containers, exceptions, fast-logger, hashable, http-client
+     , http-client-tls, http-conduit, http-types, iso8601-time, lens
+     , lens-aeson, lifted-async, monad-control, monad-logger, mtl
      , random, resourcet, retry, safe-exceptions, say, scientific, split
-     , stm, tasty, tasty-hunit, template-haskell, text, time
-     , transformers, unordered-containers, uuid, vector, wai, warp
+     , stm, stm-chans, stm-conduit, tasty, tasty-hunit, template-haskell
+     , text, time, transformers, transformers-base, unliftio
+     , unliftio-core, unordered-containers, uuid, vector, wai, warp
      }:
      mkDerivation {
        pname = "nakadi-client";
-       version = "0.4.1.0";
-       sha256 = "08f2gp9fvc6dlsqb6z50rpfb8rjnlwv2001q5aixlkslhhh0jhr7";
+       version = "0.5.0.0";
+       sha256 = "10n278iqy8kp6vdx1d5rdlsbsk74m9s0fyi3w1vprrs0va92a06b";
        libraryHaskellDepends = [
          aeson aeson-casing base bytestring conduit conduit-combinators
-         conduit-extra containers hashable http-client http-client-tls
-         http-conduit http-types iso8601-time lens monad-logger mtl
-         resourcet retry safe-exceptions scientific split template-haskell
-         text time transformers unordered-containers uuid vector
+         conduit-extra containers exceptions hashable http-client
+         http-client-tls http-conduit http-types iso8601-time lens
+         monad-control monad-logger mtl resourcet retry safe-exceptions
+         scientific split template-haskell text time transformers
+         transformers-base unliftio-core unordered-containers uuid vector
        ];
        testHaskellDepends = [
          aeson aeson-casing async base bytestring classy-prelude conduit
-         conduit-combinators conduit-extra containers hashable http-client
-         http-client-tls http-conduit http-types iso8601-time lens
-         lens-aeson monad-logger mtl random resourcet retry safe-exceptions
-         say scientific split stm tasty tasty-hunit template-haskell text
-         time transformers unordered-containers uuid vector wai warp
+         conduit-combinators conduit-extra containers exceptions fast-logger
+         hashable http-client http-client-tls http-conduit http-types
+         iso8601-time lens lens-aeson lifted-async monad-control
+         monad-logger mtl random resourcet retry safe-exceptions say
+         scientific split stm stm-chans stm-conduit tasty tasty-hunit
+         template-haskell text time transformers transformers-base unliftio
+         unliftio-core unordered-containers uuid vector wai warp
        ];
        homepage = "https://github.com/mtesseract/nakadi-haskell#readme";
        description = "Client library for the Nakadi Event Broker";
@@ -143536,6 +144411,18 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "named" = callPackage
+    ({ mkDerivation, base }:
+     mkDerivation {
+       pname = "named";
+       version = "0.1.0.0";
+       sha256 = "0n26085hhqcqazwb02j5ippicl04caln935dbsq8sgkaj1imryp7";
+       libraryHaskellDepends = [ base ];
+       testHaskellDepends = [ base ];
+       description = "Named parameters (keyword arguments) for Haskell";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "named-formlet" = callPackage
     ({ mkDerivation, base, blaze-html, bytestring, containers, mtl
      , text, transformers
@@ -143933,14 +144820,41 @@ self: {
     ({ mkDerivation }:
      mkDerivation {
        pname = "nats";
-       version = "1.1.1";
-       sha256 = "1kfl2yy97nb7q0j17v96rl73xvi3z4db9bk0xychc76dax41n78k";
+       version = "1.1.2";
+       sha256 = "1v40drmhixck3pz3mdfghamh73l4rp71mzcviipv1y8jhrfxilmr";
        doHaddock = false;
        homepage = "http://github.com/ekmett/nats/";
        description = "Natural numbers";
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "nats-client" = callPackage
+    ({ mkDerivation, aeson, attoparsec, base, bytestring, containers
+     , criterion, data-default, exceptions, hedgehog, hslogger
+     , monad-control, mtl, network, random, resource-pool
+     , test-framework, text, time, transformers
+     }:
+     mkDerivation {
+       pname = "nats-client";
+       version = "0.1.0.0";
+       sha256 = "0xpxsz0y3f7mgqbbhk33yd9n7q260h3lf7brynmvqwmfbbkplkrg";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         aeson attoparsec base bytestring containers data-default exceptions
+         hslogger monad-control network random resource-pool text
+         transformers
+       ];
+       executableHaskellDepends = [ base bytestring network ];
+       testHaskellDepends = [
+         aeson base bytestring hedgehog mtl test-framework
+       ];
+       benchmarkHaskellDepends = [ base criterion time ];
+       homepage = "https://bitbucket.org/jpgneves/nats-client#readme";
+       description = "Another Haskell client for NATS (https://nats.io)";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "nats-queue" = callPackage
     ({ mkDerivation, aeson, async, base, bytestring, containers
      , dequeue, hspec, network, network-uri, random, text
@@ -144021,8 +144935,8 @@ self: {
        pname = "natural-transformation";
        version = "0.4";
        sha256 = "1by8xwjc23l6pa9l4iv7zp82dykpll3vc3hgxk0pgva724n8xhma";
-       revision = "3";
-       editedCabalFile = "0z6vmdgz9r2fbgzh2xvrw6cy5h7m1jv911jah615s6xgr52smhrf";
+       revision = "4";
+       editedCabalFile = "1zppa1fcc7pl7ak0hs3w3pkx34398nrfiiwa3w689ib08kqkdpby";
        libraryHaskellDepends = [ base ];
        testHaskellDepends = [
          base containers quickcheck-instances tasty tasty-quickcheck
@@ -144442,7 +145356,7 @@ self: {
      , monad-control-aligned, mtl, poly-arity, pred-set, pred-trie
      , regex-compat, semigroups, tasty, tasty-hspec, text, transformers
      , tries, unordered-containers, wai-middleware-content-type
-     , wai-middleware-verbs, wai-transformers, warp
+     , wai-middleware-verbs, wai-transformers
      }:
      mkDerivation {
        pname = "nested-routes";
@@ -144457,13 +145371,6 @@ self: {
          transformers tries unordered-containers wai-middleware-content-type
          wai-middleware-verbs wai-transformers
        ];
-       executableHaskellDepends = [
-         attoparsec base bytestring composition-extra errors exceptions
-         hashable hashtables HSet http-types mtl poly-arity pred-set
-         pred-trie regex-compat semigroups text transformers tries
-         unordered-containers wai-middleware-content-type
-         wai-middleware-verbs wai-transformers warp
-       ];
        testHaskellDepends = [
          attoparsec base bytestring composition-extra errors exceptions
          hashable hashtables HSet hspec hspec-wai http-types mtl poly-arity
@@ -144761,6 +145668,7 @@ self: {
        ];
        description = "Contract normaliser and simulator";
        license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "netspec" = callPackage
@@ -144901,9 +145809,7 @@ self: {
      }) {};
 
   "netwire-input-glfw" = callPackage
-    ({ mkDerivation, array, base, bytestring, containers, directory
-     , filepath, GLFW-b, mtl, netwire, netwire-input, OpenGL, stm
-     , transformers
+    ({ mkDerivation, base, containers, GLFW-b, mtl, netwire-input, stm
      }:
      mkDerivation {
        pname = "netwire-input-glfw";
@@ -144914,13 +145820,27 @@ self: {
        libraryHaskellDepends = [
          base containers GLFW-b mtl netwire-input stm
        ];
-       executableHaskellDepends = [
-         array base bytestring containers directory filepath GLFW-b mtl
-         netwire netwire-input OpenGL transformers
+       homepage = "https://www.github.com/Mokosha/netwire-input-glfw";
+       description = "GLFW instance of netwire-input";
+       license = stdenv.lib.licenses.mit;
+     }) {};
+
+  "netwire-input-glfw_0_0_8" = callPackage
+    ({ mkDerivation, base, containers, GLFW-b, mtl, netwire-input, stm
+     }:
+     mkDerivation {
+       pname = "netwire-input-glfw";
+       version = "0.0.8";
+       sha256 = "1nf0ikx6cfsm9xh4zmz64iwq4w92g0g3zalsk3zzd0a7pq74cdz9";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         base containers GLFW-b mtl netwire-input stm
        ];
        homepage = "https://www.github.com/Mokosha/netwire-input-glfw";
        description = "GLFW instance of netwire-input";
        license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "netwire-input-javascript" = callPackage
@@ -145001,7 +145921,7 @@ self: {
      }) {};
 
   "network-address" = callPackage
-    ({ mkDerivation, base, Cabal, criterion, QuickCheck, test-framework
+    ({ mkDerivation, base, Cabal, QuickCheck, test-framework
      , test-framework-quickcheck2
      }:
      mkDerivation {
@@ -145011,7 +145931,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base Cabal ];
-       executableHaskellDepends = [ base Cabal criterion ];
        testHaskellDepends = [
          base Cabal QuickCheck test-framework test-framework-quickcheck2
        ];
@@ -145204,20 +146123,6 @@ self: {
     ({ mkDerivation, base, bytestring, network, text, time, vector }:
      mkDerivation {
        pname = "network-carbon";
-       version = "1.0.10";
-       sha256 = "0fl6dxsarfrj0da3a1ajzisrnrgcjfwpag1997b0byvvkw47kspc";
-       libraryHaskellDepends = [
-         base bytestring network text time vector
-       ];
-       homepage = "http://github.com/ocharles/network-carbon";
-       description = "A Haskell implementation of the Carbon protocol (part of the Graphite monitoring tools)";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "network-carbon_1_0_11" = callPackage
-    ({ mkDerivation, base, bytestring, network, text, time, vector }:
-     mkDerivation {
-       pname = "network-carbon";
        version = "1.0.11";
        sha256 = "1nkyj9114k2b6gwdd93yfrmf9zbziymbnbh3wxnz0vnk1hl2j5yq";
        libraryHaskellDepends = [
@@ -145226,7 +146131,6 @@ self: {
        homepage = "http://github.com/ocharles/network-carbon";
        description = "A Haskell implementation of the Carbon protocol (part of the Graphite monitoring tools)";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "network-conduit" = callPackage
@@ -145511,6 +146415,8 @@ self: {
        pname = "network-msgpack-rpc";
        version = "0.0.4";
        sha256 = "0b9llxfgl2lcjlcz9ai6k6yhrlip6shd0wd56mfgbvv3lbd5n62r";
+       revision = "1";
+       editedCabalFile = "0v08258721mv2bih7h03ss0jvjx2b87kclvjn15xrksf93nbrbq2";
        libraryHaskellDepends = [
          base binary binary-conduit bytestring conduit conduit-extra
          data-default-class data-default-instances-base data-msgpack
@@ -145617,9 +146523,7 @@ self: {
      }) {};
 
   "network-service" = callPackage
-    ({ mkDerivation, base, base64-bytestring, bytestring, network
-     , network-simple
-     }:
+    ({ mkDerivation, base, base64-bytestring, bytestring, network }:
      mkDerivation {
        pname = "network-service";
        version = "0.1.0.0";
@@ -145629,9 +146533,6 @@ self: {
        libraryHaskellDepends = [
          base base64-bytestring bytestring network
        ];
-       executableHaskellDepends = [
-         base base64-bytestring bytestring network network-simple
-       ];
        homepage = "https://github.com/angerman/network-service";
        description = "Provide a service at the data type level";
        license = stdenv.lib.licenses.mit;
@@ -145854,10 +146755,9 @@ self: {
 
   "network-transport-zeromq" = callPackage
     ({ mkDerivation, async, base, binary, bytestring, containers
-     , criterion, data-accessor, distributed-process
-     , distributed-process-tests, exceptions, network, network-transport
-     , network-transport-tests, random, semigroups, stm, stm-chans
-     , tasty, tasty-hunit, test-framework, transformers, zeromq4-haskell
+     , criterion, data-accessor, distributed-process, exceptions
+     , network-transport, network-transport-tests, random, semigroups
+     , stm, stm-chans, tasty, tasty-hunit, transformers, zeromq4-haskell
      }:
      mkDerivation {
        pname = "network-transport-zeromq";
@@ -145870,13 +146770,9 @@ self: {
          network-transport random semigroups stm stm-chans transformers
          zeromq4-haskell
        ];
-       executableHaskellDepends = [
-         base binary bytestring criterion distributed-process
-       ];
        testHaskellDepends = [
-         base bytestring containers distributed-process-tests network
-         network-transport network-transport-tests stm stm-chans tasty
-         tasty-hunit test-framework zeromq4-haskell
+         base network-transport network-transport-tests tasty tasty-hunit
+         zeromq4-haskell
        ];
        benchmarkHaskellDepends = [
          base binary bytestring criterion distributed-process
@@ -146139,9 +147035,8 @@ self: {
 
   "newt" = callPackage
     ({ mkDerivation, array, base, bytestring, cmdargs, containers
-     , directory, filemanip, filepath, HUnit, mtl, process, QuickCheck
-     , safe, test-framework, test-framework-hunit
-     , test-framework-quickcheck2, text, Unixutils, uuid
+     , directory, filemanip, filepath, mtl, process, safe, text
+     , Unixutils
      }:
      mkDerivation {
        pname = "newt";
@@ -146153,11 +147048,7 @@ self: {
          array base bytestring cmdargs containers directory filemanip
          filepath mtl process safe text Unixutils
        ];
-       executableHaskellDepends = [
-         base cmdargs containers directory filepath HUnit mtl process
-         QuickCheck safe test-framework test-framework-hunit
-         test-framework-quickcheck2 Unixutils uuid
-       ];
+       executableHaskellDepends = [ base cmdargs containers mtl ];
        description = "A trivially simple app to create things from simple templates";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -146206,6 +147097,23 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "newtype-generics_0_5_2_1" = callPackage
+    ({ mkDerivation, base, criterion, hspec, hspec-discover, HUnit
+     , semigroups, transformers
+     }:
+     mkDerivation {
+       pname = "newtype-generics";
+       version = "0.5.2.1";
+       sha256 = "1wdm6mg78a5cipbvqinbh33266rgk0axxzdchpzfdxw1iz4xs4nk";
+       libraryHaskellDepends = [ base transformers ];
+       testHaskellDepends = [ base hspec HUnit ];
+       testToolDepends = [ hspec-discover ];
+       benchmarkHaskellDepends = [ base criterion semigroups ];
+       description = "A typeclass and set of functions for working with newtypes, with generics support";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "newtype-th" = callPackage
     ({ mkDerivation, base, haskell-src-meta, newtype, syb
      , template-haskell
@@ -146273,7 +147181,7 @@ self: {
      }) {};
 
   "nfc" = callPackage
-    ({ mkDerivation, base, base16-bytestring, bytestring, c2hs, nfc }:
+    ({ mkDerivation, base, bytestring, c2hs, nfc }:
      mkDerivation {
        pname = "nfc";
        version = "0.1.0";
@@ -146283,7 +147191,6 @@ self: {
        libraryHaskellDepends = [ base bytestring ];
        librarySystemDepends = [ nfc ];
        libraryToolDepends = [ c2hs ];
-       executableHaskellDepends = [ base base16-bytestring bytestring ];
        homepage = "https://github.com/centromere/nfc#readme";
        description = "libnfc bindings";
        license = stdenv.lib.licenses.publicDomain;
@@ -146316,8 +147223,8 @@ self: {
      }:
      mkDerivation {
        pname = "ngx-export";
-       version = "1.1.0";
-       sha256 = "1d3xz1jsvnr0rg5y0rpkrlwzng589abq8w5ylg7d5pmr75ih2a0n";
+       version = "1.3.0";
+       sha256 = "1x4na14387sr26lnjmxdnk8gl41pfi4xq3r5a37yl45l4gdhr5hs";
        libraryHaskellDepends = [
          async base binary bytestring deepseq monad-loops template-haskell
          unix
@@ -146474,6 +147381,46 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "nirum" = callPackage
+    ({ mkDerivation, base, blaze-html, blaze-markup, bytestring, cmark
+     , containers, directory, email-validate, filepath, fsnotify
+     , heterocephalus, hlint, hspec, hspec-core, hspec-meta, htoml
+     , interpolatedstring-perl6, megaparsec, mtl, optparse-applicative
+     , parsec, pretty, process, semigroups, semver, shakespeare, stm
+     , string-qq, template-haskell, temporary, text, turtle
+     , unordered-containers, uri
+     }:
+     mkDerivation {
+       pname = "nirum";
+       version = "0.3.0";
+       sha256 = "1s9yk0gjly0camg3crk0nk2943maizgija415lrd0b8ykgm97ax6";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         base blaze-html blaze-markup bytestring cmark containers directory
+         email-validate filepath fsnotify heterocephalus htoml
+         interpolatedstring-perl6 megaparsec mtl optparse-applicative parsec
+         pretty semver shakespeare stm template-haskell text
+         unordered-containers uri
+       ];
+       executableHaskellDepends = [
+         base blaze-html bytestring containers directory email-validate
+         filepath htoml interpolatedstring-perl6 megaparsec mtl parsec
+         pretty semver text unordered-containers
+       ];
+       testHaskellDepends = [
+         base blaze-html bytestring containers directory email-validate
+         filepath hlint hspec hspec-core hspec-meta htoml
+         interpolatedstring-perl6 megaparsec mtl parsec pretty process
+         semigroups semver string-qq temporary text turtle
+         unordered-containers
+       ];
+       homepage = "http://nirum.org/";
+       description = "IDL compiler and RPC/distributed object framework for microservices";
+       license = stdenv.lib.licenses.gpl3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "nist-beacon" = callPackage
     ({ mkDerivation, base, bytestring, http-conduit, xml }:
      mkDerivation {
@@ -146832,8 +147779,8 @@ self: {
     ({ mkDerivation, array, base, containers, regex-compat }:
      mkDerivation {
        pname = "nofib-analyse";
-       version = "8.1.0.20160428";
-       sha256 = "18af70lpf60xhmfksmhyj22awcdmy44s1klm0kmwr9f5fxs88wi6";
+       version = "8.5.0.20180213";
+       sha256 = "04jdbbkjh0kmxn25hy7rqli8cmysvx8vbdqfnfxx35w93kpsndxf";
        isLibrary = false;
        isExecutable = true;
        executableHaskellDepends = [ array base containers regex-compat ];
@@ -147053,6 +148000,19 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "non-empty-text" = callPackage
+    ({ mkDerivation, base, doctest, Glob, hspec, QuickCheck, text }:
+     mkDerivation {
+       pname = "non-empty-text";
+       version = "0.1.1";
+       sha256 = "1s2rzcaiilid2dv462hkr3mxg4gk1dqyyayvwhs5nl81y7a35krd";
+       libraryHaskellDepends = [ base text ];
+       testHaskellDepends = [ base doctest Glob hspec QuickCheck text ];
+       homepage = "https://github.com/acatton/haskell-non-empty-text#readme";
+       description = "Non empty Data.Text type";
+       license = "unknown";
+     }) {};
+
   "non-empty-zipper" = callPackage
     ({ mkDerivation, base, checkers, QuickCheck }:
      mkDerivation {
@@ -147079,6 +148039,20 @@ self: {
        license = "GPL";
      }) {};
 
+  "non-negative_0_1_2" = callPackage
+    ({ mkDerivation, base, QuickCheck, semigroups, utility-ht }:
+     mkDerivation {
+       pname = "non-negative";
+       version = "0.1.2";
+       sha256 = "0f01q916dzkl1i0v15qrw9cviycki5g3fgi6x8gs45iwbzssq52n";
+       libraryHaskellDepends = [ base QuickCheck semigroups utility-ht ];
+       testHaskellDepends = [ base QuickCheck semigroups utility-ht ];
+       homepage = "http://code.haskell.org/~thielema/non-negative/";
+       description = "Non-negative numbers";
+       license = "GPL";
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "nonce" = callPackage
     ({ mkDerivation, base, base64-bytestring, bytestring, entropy, text
      , transformers, unliftio, unliftio-core
@@ -147124,8 +148098,8 @@ self: {
     ({ mkDerivation, base }:
      mkDerivation {
        pname = "nonfree";
-       version = "0.1.0.2";
-       sha256 = "1wmh8bp06rxzakcri25sg5vpmjqci8nz6dg158c5vbs6vizj1hz0";
+       version = "0.1.0.3";
+       sha256 = "1qdrzc0r37sw2knfgr9yqp7j8bcp1fayprjjg9xwkgxsjfsqp30b";
        libraryHaskellDepends = [ base ];
        description = "Free structures sans laws";
        license = stdenv.lib.licenses.mit;
@@ -147145,19 +148119,20 @@ self: {
      }) {};
 
   "nonlinear-optimization-ad" = callPackage
-    ({ mkDerivation, ad, base, csv, nonlinear-optimization, primitive
+    ({ mkDerivation, ad, base, nonlinear-optimization, primitive
      , reflection, vector
      }:
      mkDerivation {
        pname = "nonlinear-optimization-ad";
        version = "0.2.2";
        sha256 = "07a80ggl8wxjllam1cqlamwmh61lkxag1410gj8n53hdd55slqxj";
+       revision = "1";
+       editedCabalFile = "038242cdiddjck2m995622862wd8ykla1asl9c8njbr1k0iacgbf";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
          ad base nonlinear-optimization primitive reflection vector
        ];
-       executableHaskellDepends = [ base csv ];
        homepage = "https://github.com/msakai/nonlinear-optimization-ad";
        description = "Wrapper of nonlinear-optimization package for using with AD package";
        license = stdenv.lib.licenses.gpl3;
@@ -147245,6 +148220,7 @@ self: {
        ];
        description = "Painless 3D graphics, no affiliation with gloss";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "not-gloss-examples" = callPackage
@@ -147799,6 +148775,27 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "numeric-prelude_0_4_3" = callPackage
+    ({ mkDerivation, array, base, containers, deepseq, non-negative
+     , parsec, QuickCheck, random, semigroups, storable-record
+     , utility-ht
+     }:
+     mkDerivation {
+       pname = "numeric-prelude";
+       version = "0.4.3";
+       sha256 = "0bc937gblm8rz68fr3q2ms19hqjwi20wkmn1k1c0b675c2kgky5q";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         array base containers deepseq non-negative parsec QuickCheck random
+         semigroups storable-record utility-ht
+       ];
+       homepage = "http://www.haskell.org/haskellwiki/Numeric_Prelude";
+       description = "An experimental alternative hierarchy of numeric type classes";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "numeric-qq" = callPackage
     ({ mkDerivation, base, directory, doctest, filepath, loch-th
      , placeholders, template-haskell
@@ -147819,15 +148816,13 @@ self: {
      }) {};
 
   "numeric-quest" = callPackage
-    ({ mkDerivation, array, base }:
+    ({ mkDerivation, array, base, prelude-compat }:
      mkDerivation {
        pname = "numeric-quest";
-       version = "0.2.0.1";
-       sha256 = "110v2frn085pggjzl3l8wqgr4vcdd5h29x2wak2a59x16ngjg7ga";
-       revision = "1";
-       editedCabalFile = "0bh9zzya42dbpc5c7j7fnyphm5nndib1ycbmanplgx0b707x1sda";
+       version = "0.2.0.2";
+       sha256 = "0agwfmbxyig502ac7xvf7208m0v7wdrcg7m30d1iw22c687ph5k9";
        enableSeparateDataOutput = true;
-       libraryHaskellDepends = [ array base ];
+       libraryHaskellDepends = [ array base prelude-compat ];
        homepage = "http://www.haskell.org/haskellwiki/Numeric_Quest";
        description = "Math and quantum mechanics";
        license = "GPL";
@@ -147895,20 +148890,19 @@ self: {
      }) {};
 
   "numhask-array" = callPackage
-    ({ mkDerivation, accelerate, accelerate-llvm
-     , accelerate-llvm-native, adjunctions, base, deepseq, dimensions
+    ({ mkDerivation, adjunctions, base, deepseq, dimensions
      , distributive, doctest, ghc-typelits-natnormalise, numhask
      , protolude, QuickCheck, singletons, tasty, tasty-quickcheck
      , typelits-witnesses, vector
      }:
      mkDerivation {
        pname = "numhask-array";
-       version = "0.1.0.0";
-       sha256 = "0m8xgdizpw80dxhbdx45bhn8m71a4lk2zy6ckczrly02g272mqxv";
+       version = "0.1.1.0";
+       sha256 = "0qdlc8ipjb6p5hcp7kvjspa3yjjdsjah1k5c35w6njy0ld9rdi54";
        libraryHaskellDepends = [
-         accelerate accelerate-llvm accelerate-llvm-native adjunctions base
-         deepseq dimensions distributive ghc-typelits-natnormalise numhask
-         protolude QuickCheck singletons typelits-witnesses vector
+         adjunctions base deepseq dimensions distributive
+         ghc-typelits-natnormalise numhask protolude QuickCheck singletons
+         typelits-witnesses vector
        ];
        testHaskellDepends = [
          base doctest numhask QuickCheck tasty tasty-quickcheck
@@ -147926,8 +148920,8 @@ self: {
      }:
      mkDerivation {
        pname = "numhask-histogram";
-       version = "0.0.0.1";
-       sha256 = "1a7kd8va59rzsfsxin5m785ihpka3al53kfv16cz9p7kw9bjpanf";
+       version = "0.0.1.0";
+       sha256 = "1s8z2fwgrnsaq0w9zda5rpf9dcrd51dqaq118r6pi2r7y1vwzd6k";
        libraryHaskellDepends = [
          base containers foldl numhask numhask-range protolude tdigest
        ];
@@ -148217,21 +149211,21 @@ self: {
      }) {};
 
   "o-clock" = callPackage
-    ({ mkDerivation, base, deepseq, gauge, ghc-prim, hedgehog
-     , markdown-unlit, tasty, tasty-hedgehog, tasty-hspec, tiempo
-     , time-units, transformers, type-spec
+    ({ mkDerivation, base, deepseq, doctest, gauge, ghc-prim, Glob
+     , hedgehog, markdown-unlit, tasty, tasty-hedgehog, tasty-hspec
+     , tiempo, time-units, transformers, type-spec
      }:
      mkDerivation {
        pname = "o-clock";
-       version = "0.0.0";
-       sha256 = "0nswlj9anwmhl6vgw5gpdd924niiw15plwb46wwmzrv7jsmbaiyj";
+       version = "0.1.0";
+       sha256 = "18rqy00hkqqqbhmsgkhza9blm2fl6kb29fs78ifkr2hqsya17fh6";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base ghc-prim transformers ];
        executableHaskellDepends = [ base ];
        testHaskellDepends = [
-         base hedgehog markdown-unlit tasty tasty-hedgehog tasty-hspec
-         type-spec
+         base doctest Glob hedgehog markdown-unlit tasty tasty-hedgehog
+         tasty-hspec type-spec
        ];
        benchmarkHaskellDepends = [ base deepseq gauge tiempo time-units ];
        homepage = "https://github.com/serokell/o-clock";
@@ -148353,8 +149347,7 @@ self: {
 
   "oberon0" = callPackage
     ({ mkDerivation, array, AspectAG, base, containers, ghc-prim, HList
-     , language-c, mtl, murder, template-haskell, transformers
-     , uu-parsinglib, uulib
+     , mtl, murder, template-haskell, transformers, uu-parsinglib, uulib
      }:
      mkDerivation {
        pname = "oberon0";
@@ -148366,10 +149359,6 @@ self: {
          array AspectAG base containers ghc-prim HList mtl murder
          template-haskell transformers uu-parsinglib uulib
        ];
-       executableHaskellDepends = [
-         AspectAG base containers HList language-c murder uu-parsinglib
-         uulib
-       ];
        doHaddock = false;
        homepage = "http://www.cs.uu.nl/wiki/Center/CoCoCo";
        description = "Oberon0 Compiler";
@@ -148453,28 +149442,27 @@ self: {
      }) {};
 
   "ocaml-export" = callPackage
-    ({ mkDerivation, aeson, base, bytestring, constraints, containers
-     , directory, file-embed, filepath, formatting, hspec
-     , hspec-golden-aeson, mtl, process, QuickCheck
-     , quickcheck-arbitrary-adt, servant, servant-server, split
-     , template-haskell, text, time, typelits-witnesses, wai, wai-extra
-     , warp, wl-pprint-text
+    ({ mkDerivation, aeson, base, bytestring, containers, directory
+     , file-embed, filepath, formatting, hspec, hspec-golden-aeson, mtl
+     , process, QuickCheck, quickcheck-arbitrary-adt, servant
+     , servant-server, split, template-haskell, text, time
+     , typelits-witnesses, wai, wai-extra, warp, wl-pprint-text
      }:
      mkDerivation {
        pname = "ocaml-export";
-       version = "0.5.0.0";
-       sha256 = "0xp4aiqn5p1c3frl83axjchbs5dwh4ibqqyiixvi0i1wpbi9fqka";
+       version = "0.7.0.0";
+       sha256 = "10cvzzqnv7za9albnma112cx0pr4ranjqg3r38k5x6jmj4n5s4bp";
        libraryHaskellDepends = [
          aeson base bytestring containers directory file-embed filepath
-         formatting hspec-golden-aeson mtl QuickCheck
+         formatting hspec hspec-golden-aeson mtl QuickCheck
          quickcheck-arbitrary-adt servant servant-server split
          template-haskell text time typelits-witnesses wl-pprint-text
        ];
        testHaskellDepends = [
-         aeson base bytestring constraints containers directory filepath
-         hspec hspec-golden-aeson process QuickCheck
-         quickcheck-arbitrary-adt servant servant-server template-haskell
-         text time typelits-witnesses wai wai-extra warp
+         aeson base bytestring containers directory filepath hspec
+         hspec-golden-aeson process QuickCheck quickcheck-arbitrary-adt
+         servant servant-server template-haskell text time
+         typelits-witnesses wai wai-extra warp
        ];
        homepage = "https://github.com/plow-technologies/ocaml-export#readme";
        description = "Convert Haskell types in OCaml types";
@@ -148623,15 +149611,21 @@ self: {
      }) {};
 
   "odpic-raw" = callPackage
-    ({ mkDerivation, base, c2hs, hspec, odpic, QuickCheck, text }:
+    ({ mkDerivation, base, c2hs, conduit, hspec, monad-control
+     , monad-logger, odpic, QuickCheck, resourcet, text, time
+     }:
      mkDerivation {
        pname = "odpic-raw";
-       version = "0.1.10";
-       sha256 = "0kbrlbnav9drmmm8h4228cgrml981cqmxf3dhkbiax3g0rh4gsv0";
-       libraryHaskellDepends = [ base text ];
+       version = "0.1.11";
+       sha256 = "0via5p0sfma91ny5rw87sirmp4189663ww25dfwi6jlha4d82hlh";
+       libraryHaskellDepends = [
+         base conduit monad-control resourcet text time
+       ];
        librarySystemDepends = [ odpic ];
        libraryToolDepends = [ c2hs ];
-       testHaskellDepends = [ base hspec QuickCheck ];
+       testHaskellDepends = [
+         base conduit hspec monad-logger QuickCheck resourcet
+       ];
        homepage = "https://github.com/leptonyu/odpic-raw#readme";
        description = "Oracle Database Bindings";
        license = stdenv.lib.licenses.bsd3;
@@ -149043,8 +150037,8 @@ self: {
     ({ mkDerivation, base, one-liner }:
      mkDerivation {
        pname = "one-liner-instances";
-       version = "0.1.0.0";
-       sha256 = "1v5a4szk3497razn7r2d3664w7bxbdcw9bacsc4y7vj3kim4nhca";
+       version = "0.1.1.0";
+       sha256 = "0yb5rdy735lalwrxvmvvjnpyikdqs2y2fjldjcbjj0r3d912azxn";
        libraryHaskellDepends = [ base one-liner ];
        homepage = "https://github.com/mstksg/one-liner-instances#readme";
        description = "Generics-based implementations for common typeclasses";
@@ -149096,23 +150090,6 @@ self: {
      }) {};
 
   "online" = callPackage
-    ({ mkDerivation, base, foldl, numhask, protolude, tdigest, vector
-     , vector-algorithms
-     }:
-     mkDerivation {
-       pname = "online";
-       version = "0.2.0";
-       sha256 = "13vg34h09ds49r5j6dg8kqh90iqhbadr6jv57y0766h1pmr5i8kh";
-       libraryHaskellDepends = [
-         base foldl numhask protolude tdigest vector vector-algorithms
-       ];
-       homepage = "https://github.com/tonyday567/online";
-       description = "online statistics";
-       license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
-     }) {};
-
-  "online_0_2_1_0" = callPackage
     ({ mkDerivation, base, doctest, foldl, formatting, numhask
      , optparse-generic, perf, protolude, scientific, tasty, tdigest
      , text, vector, vector-algorithms
@@ -150178,7 +151155,7 @@ self: {
 
   "opml-conduit" = callPackage
     ({ mkDerivation, base, bytestring, case-insensitive, conduit
-     , conduit-combinators, containers, data-default, hlint, lens-simple
+     , conduit-combinators, containers, data-default, lens-simple
      , mono-traversable, monoid-subclasses, mtl, parsers, QuickCheck
      , quickcheck-instances, resourcet, safe-exceptions, semigroups
      , tasty, tasty-hunit, tasty-quickcheck, text, time, timerep
@@ -150196,7 +151173,7 @@ self: {
        ];
        testHaskellDepends = [
          base bytestring conduit conduit-combinators containers data-default
-         hlint lens-simple mono-traversable mtl parsers QuickCheck
+         lens-simple mono-traversable mtl parsers QuickCheck
          quickcheck-instances resourcet semigroups tasty tasty-hunit
          tasty-quickcheck text time uri-bytestring xml-conduit
        ];
@@ -150326,6 +151303,18 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "optional-args_1_0_2" = callPackage
+    ({ mkDerivation, base }:
+     mkDerivation {
+       pname = "optional-args";
+       version = "1.0.2";
+       sha256 = "1r5hhn6xvc01grggxdyy48daibwzi0aikgidq0ahpa6bfynm8d1f";
+       libraryHaskellDepends = [ base ];
+       description = "Optional function arguments";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "options" = callPackage
     ({ mkDerivation, base, chell, chell-quickcheck, containers
      , monads-tf, transformers
@@ -151658,9 +152647,8 @@ self: {
          xml-conduit yaml
        ];
        executableHaskellDepends = [
-         aeson aeson-pretty attoparsec base bytestring containers directory
-         filepath mtl pandoc pandoc-types process syb temporary text vector
-         yaml
+         aeson aeson-pretty attoparsec base bytestring filepath pandoc
+         pandoc-types syb text yaml
        ];
        testHaskellDepends = [
          aeson base bytestring containers directory filepath mtl pandoc
@@ -151672,7 +152660,7 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "pandoc-citeproc_0_14_1_3" = callPackage
+  "pandoc-citeproc_0_14_1_4" = callPackage
     ({ mkDerivation, aeson, aeson-pretty, attoparsec, base, bytestring
      , Cabal, containers, data-default, directory, filepath, hs-bibutils
      , mtl, old-locale, pandoc, pandoc-types, parsec, process, rfc5051
@@ -151681,8 +152669,8 @@ self: {
      }:
      mkDerivation {
        pname = "pandoc-citeproc";
-       version = "0.14.1.3";
-       sha256 = "17cwa8h3jwfxrah496vlabz6mxkjys6pjl51iigllqbwj7cm34mp";
+       version = "0.14.1.4";
+       sha256 = "1agc7qh9sfhqy329w0ccbfx081001k93qk9h6br5gx2yqizwbdd0";
        isLibrary = true;
        isExecutable = true;
        enableSeparateDataOutput = true;
@@ -151694,9 +152682,8 @@ self: {
          xml-conduit yaml
        ];
        executableHaskellDepends = [
-         aeson aeson-pretty attoparsec base bytestring containers directory
-         filepath mtl pandoc pandoc-types process syb temporary text vector
-         yaml
+         aeson aeson-pretty attoparsec base bytestring filepath pandoc
+         pandoc-types syb text yaml
        ];
        testHaskellDepends = [
          aeson base bytestring containers directory filepath mtl pandoc
@@ -151850,20 +152837,24 @@ self: {
      }) {};
 
   "pandoc-include-code" = callPackage
-    ({ mkDerivation, base, filepath, mtl, pandoc-types, process, tasty
-     , tasty-hunit, text, unordered-containers
+    ({ mkDerivation, base, filepath, hspec, hspec-expectations, mtl
+     , pandoc-types, process, tasty, tasty-hspec, tasty-hunit, text
+     , unordered-containers
      }:
      mkDerivation {
        pname = "pandoc-include-code";
-       version = "1.2.0.2";
-       sha256 = "0mnk6ld2d1bka2wmz9718k8rfdbzhp4ym3axn4js4m0ka51w50h9";
+       version = "1.3.0.0";
+       sha256 = "1klmshyakhli0g9prqnllyrh9hsj67lps5b1cxh3jjlb6mxg5ic4";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
          base filepath mtl pandoc-types process text unordered-containers
        ];
        executableHaskellDepends = [ base pandoc-types ];
-       testHaskellDepends = [ base pandoc-types tasty tasty-hunit ];
+       testHaskellDepends = [
+         base hspec hspec-expectations pandoc-types tasty tasty-hspec
+         tasty-hunit
+       ];
        homepage = "https://github.com/owickstrom/pandoc-include-code";
        description = "A Pandoc filter for including code from source files";
        license = stdenv.lib.licenses.mpl20;
@@ -152671,6 +153662,8 @@ self: {
        pname = "parallel";
        version = "3.2.1.1";
        sha256 = "05rw8zhpqhx31zi6vg7zpyciaarh24j7g2p613xrpyrnksybjfrj";
+       revision = "1";
+       editedCabalFile = "12sgigg7r4nmyhbfn1p09ajf4s576yca31b7daj5zpp1mxgb5x7i";
        libraryHaskellDepends = [ array base containers deepseq ];
        description = "Parallel programming library";
        license = stdenv.lib.licenses.bsd3;
@@ -152866,13 +153859,12 @@ self: {
      }) {};
 
   "parconc-examples" = callPackage
-    ({ mkDerivation, abstract-par, accelerate, accelerate-io, array
-     , async, base, binary, bytestring, containers, deepseq, directory
+    ({ mkDerivation, abstract-par, accelerate, array, async, base
+     , binary, bytestring, containers, deepseq, directory
      , distributed-process, distributed-process-simplelocalnet
-     , distributed-static, fclabels, filepath, http-conduit, monad-par
-     , network, network-uri, normaldistribution, parallel, random, repa
-     , stm, template-haskell, time, transformers, utf8-string, vector
-     , xml
+     , distributed-static, filepath, http-conduit, monad-par, network
+     , network-uri, normaldistribution, parallel, random, repa, stm
+     , template-haskell, time, transformers, utf8-string, vector, xml
      }:
      mkDerivation {
        pname = "parconc-examples";
@@ -152881,12 +153873,12 @@ self: {
        isLibrary = false;
        isExecutable = true;
        executableHaskellDepends = [
-         abstract-par accelerate accelerate-io array async base binary
-         bytestring containers deepseq directory distributed-process
-         distributed-process-simplelocalnet distributed-static fclabels
-         filepath http-conduit monad-par network network-uri
-         normaldistribution parallel random repa stm template-haskell time
-         transformers utf8-string vector xml
+         abstract-par accelerate array async base binary bytestring
+         containers deepseq directory distributed-process
+         distributed-process-simplelocalnet distributed-static filepath
+         http-conduit monad-par network network-uri normaldistribution
+         parallel random repa stm template-haskell time transformers
+         utf8-string vector xml
        ];
        homepage = "http://github.com/simonmar/parconc-examples";
        description = "Examples to accompany the book \"Parallel and Concurrent Programming in Haskell\"";
@@ -152970,35 +153962,15 @@ self: {
      }:
      mkDerivation {
        pname = "parsec";
-       version = "3.1.11";
-       sha256 = "0vk7q9j2128q191zf1sg0ylj9s9djwayqk9747k0a5fin4f2b1vg";
-       revision = "1";
-       editedCabalFile = "0prqjj2gxlwh2qhpcck5k6cgk4har9xqxc67yzjqd44mr2xgl7ir";
-       libraryHaskellDepends = [ base bytestring mtl text ];
-       testHaskellDepends = [
-         base HUnit test-framework test-framework-hunit
-       ];
-       homepage = "https://github.com/aslatter/parsec";
-       description = "Monadic parser combinators";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "parsec_3_1_12_0" = callPackage
-    ({ mkDerivation, base, bytestring, HUnit, mtl, test-framework
-     , test-framework-hunit, text
-     }:
-     mkDerivation {
-       pname = "parsec";
-       version = "3.1.12.0";
-       sha256 = "0jav9a1hb156qd29n3sclxrb7bk477n89jshqpmlym2z2h880bc2";
+       version = "3.1.13.0";
+       sha256 = "1wc09pyn70p8z6llink10c8pqbh6ikyk554911yfwxv1g91swqbq";
        libraryHaskellDepends = [ base bytestring mtl text ];
        testHaskellDepends = [
          base HUnit mtl test-framework test-framework-hunit
        ];
-       homepage = "https://github.com/haskell/parsec";
+       homepage = "https://github.com/hvr/parsec";
        description = "Monadic parser combinators";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "parsec-extra" = callPackage
@@ -153397,6 +154369,19 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "partial-handler_1_0_3" = callPackage
+    ({ mkDerivation, base }:
+     mkDerivation {
+       pname = "partial-handler";
+       version = "1.0.3";
+       sha256 = "0cf1748zyr07zv0ffi44rf5b9f7ygdybbdcl7m7c0zj14kq2miwl";
+       libraryHaskellDepends = [ base ];
+       homepage = "https://github.com/nikita-volkov/partial-handler";
+       description = "A composable exception handler";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "partial-isomorphisms" = callPackage
     ({ mkDerivation, base, template-haskell }:
      mkDerivation {
@@ -153457,6 +154442,20 @@ self: {
        license = stdenv.lib.licenses.asl20;
      }) {};
 
+  "partial-semigroup_0_3_0_3" = callPackage
+    ({ mkDerivation, base, doctest, hedgehog }:
+     mkDerivation {
+       pname = "partial-semigroup";
+       version = "0.3.0.3";
+       sha256 = "1vsn82kpv2ny4yjj8gq8xaq8kvi55wzy8ix0k4lsppsda8j3s9rx";
+       libraryHaskellDepends = [ base ];
+       testHaskellDepends = [ base doctest hedgehog ];
+       homepage = "https://github.com/chris-martin/partial-semigroup";
+       description = "A partial binary associative operator";
+       license = stdenv.lib.licenses.asl20;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "partial-semigroup-hedgehog" = callPackage
     ({ mkDerivation, base, hedgehog, partial-semigroup }:
      mkDerivation {
@@ -153867,6 +154866,27 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "pathtype_0_8_1" = callPackage
+    ({ mkDerivation, base, deepseq, directory, old-time, QuickCheck
+     , random, semigroups, tagged, time, transformers, utility-ht
+     }:
+     mkDerivation {
+       pname = "pathtype";
+       version = "0.8.1";
+       sha256 = "03rlj8klzxqimjv44h07xbij0acr63pddxppq9yfjlyggmaxrrnm";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         base deepseq directory old-time QuickCheck semigroups tagged time
+         transformers utility-ht
+       ];
+       testHaskellDepends = [ base random ];
+       homepage = "http://hub.darcs.net/thielema/pathtype/";
+       description = "Type-safe replacement for System.FilePath etc";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "pathwalk" = callPackage
     ({ mkDerivation, base, directory, filepath, transformers }:
      mkDerivation {
@@ -154665,7 +155685,6 @@ self: {
          base hashtables haskell-src-meta ListLike monad-control mtl
          template-haskell
        ];
-       executableHaskellDepends = [ base ];
        homepage = "http://tanakh.github.com/Peggy";
        description = "The Parser Generator for Haskell";
        license = stdenv.lib.licenses.bsd3;
@@ -154719,8 +155738,8 @@ self: {
      }:
      mkDerivation {
        pname = "pencil";
-       version = "0.1.1";
-       sha256 = "0k1lcmllfcqnlyidla6icvzx41q0wsykwc7ak68m9lbri1d7g5ry";
+       version = "0.1.2";
+       sha256 = "0wgs79vsz52cnmbcfzbb3avn98ciadnispgr98h6kwhgj5pmaxbm";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -154733,6 +155752,7 @@ self: {
        homepage = "https://github.com/elben/pencil";
        description = "Static site generator";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "penn-treebank" = callPackage
@@ -154936,15 +155956,15 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
-  "perf_0_3_1_0" = callPackage
+  "perf_0_3_1_1" = callPackage
     ({ mkDerivation, base, containers, doctest, foldl, formatting
      , numhask, optparse-generic, protolude, rdtsc, scientific, tdigest
      , text, time, vector
      }:
      mkDerivation {
        pname = "perf";
-       version = "0.3.1.0";
-       sha256 = "1pr735gflp91ljfrlpba6il1l4zm260whdp4hc205jff0r0gv44c";
+       version = "0.3.1.1";
+       sha256 = "0zwv6d18sxjn7xz4z0mx43gj3bavm4vyw1sxys6zlxr6xfpka20q";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -154962,28 +155982,29 @@ self: {
      }) {};
 
   "perfect-hash-generator" = callPackage
-    ({ mkDerivation, base, containers, data-ordlist, directory
-     , filepath, hashable, HUnit, optparse-applicative, random
-     , test-framework, test-framework-hunit, unordered-containers
-     , vector
+    ({ mkDerivation, base, binary, bytestring, containers, data-ordlist
+     , directory, filepath, hashable, HUnit, optparse-applicative
+     , random, test-framework, test-framework-hunit, text
+     , unordered-containers, vector
      }:
      mkDerivation {
        pname = "perfect-hash-generator";
-       version = "0.1.0.4";
-       sha256 = "1g3z5q3wq1rzch3l6nb9x3k828hlrmqwqwyr5iz979rm0iif7yfy";
+       version = "0.2.0.6";
+       sha256 = "045iyxjnx1yzl9xqk5fv8qxjz29sg2pfndry1v24z6a5r88pcwnz";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
-         base containers data-ordlist directory filepath hashable
-         unordered-containers vector
+         base binary bytestring containers data-ordlist directory filepath
+         hashable text unordered-containers vector
        ];
        executableHaskellDepends = [
-         base containers hashable optparse-applicative random
-         unordered-containers vector
+         base binary bytestring containers hashable optparse-applicative
+         random text unordered-containers vector
        ];
        testHaskellDepends = [
-         base hashable HUnit optparse-applicative test-framework
-         test-framework-hunit unordered-containers vector
+         base binary bytestring hashable HUnit optparse-applicative
+         test-framework test-framework-hunit text unordered-containers
+         vector
        ];
        homepage = "https://github.com/kostmo/perfect-hash-generator#readme";
        description = "Perfect minimal hashing implementation in native Haskell";
@@ -155180,7 +156201,7 @@ self: {
        maintainers = with stdenv.lib.maintainers; [ psibi ];
      }) {};
 
-  "persistent_2_8_0" = callPackage
+  "persistent_2_8_1" = callPackage
     ({ mkDerivation, aeson, attoparsec, base, base64-bytestring
      , blaze-html, blaze-markup, bytestring, conduit, containers
      , fast-logger, haskell-src-meta, hspec, http-api-data
@@ -155191,8 +156212,8 @@ self: {
      }:
      mkDerivation {
        pname = "persistent";
-       version = "2.8.0";
-       sha256 = "07x73s1icxj3wbw197f7qbj1pk9gg30vk4f7yz1hxs27lzximjfh";
+       version = "2.8.1";
+       sha256 = "1mfk6mxicg12vnvc9049k55dgvcx4ss4z2219qr8wy89m2z72l1k";
        libraryHaskellDepends = [
          aeson attoparsec base base64-bytestring blaze-html blaze-markup
          bytestring conduit containers fast-logger haskell-src-meta
@@ -155411,15 +156432,15 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "persistent-mysql_2_8_0" = callPackage
+  "persistent-mysql_2_8_1" = callPackage
     ({ mkDerivation, aeson, base, blaze-builder, bytestring, conduit
      , containers, monad-logger, mysql, mysql-simple, persistent
      , resource-pool, resourcet, text, transformers, unliftio-core
      }:
      mkDerivation {
        pname = "persistent-mysql";
-       version = "2.8.0";
-       sha256 = "0sy9gl2604f3qargvgkqnhdfbnwrq81y2hrhmx4fsknpfkkypya4";
+       version = "2.8.1";
+       sha256 = "0m76hsrgv118bg6sawna6xwg30q8vl84zqa8qc9kll4hzbw2kk40";
        libraryHaskellDepends = [
          aeson base blaze-builder bytestring conduit containers monad-logger
          mysql mysql-simple persistent resource-pool resourcet text
@@ -155457,6 +156478,32 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "persistent-mysql-haskell_0_4_0" = callPackage
+    ({ mkDerivation, aeson, base, bytestring, conduit, containers
+     , io-streams, monad-logger, mysql-haskell, network, persistent
+     , persistent-template, resource-pool, resourcet, text, time, tls
+     , transformers, unliftio-core
+     }:
+     mkDerivation {
+       pname = "persistent-mysql-haskell";
+       version = "0.4.0";
+       sha256 = "1gcvfvyg0xf4m6qm78czdkqabqnx07wqkr6b6myfwy2g1frdhb0d";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         aeson base bytestring conduit containers io-streams monad-logger
+         mysql-haskell network persistent resource-pool resourcet text time
+         tls transformers unliftio-core
+       ];
+       executableHaskellDepends = [
+         base monad-logger persistent persistent-template transformers
+       ];
+       homepage = "http://www.yesodweb.com/book/persistent";
+       description = "A pure haskell backend for the persistent library using MySQL database server";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "persistent-odbc" = callPackage
     ({ mkDerivation, aeson, base, bytestring, conduit, containers
      , convertible, HDBC, HDBC-odbc, monad-control, monad-logger
@@ -155512,7 +156559,7 @@ self: {
        maintainers = with stdenv.lib.maintainers; [ psibi ];
      }) {};
 
-  "persistent-postgresql_2_8_0" = callPackage
+  "persistent-postgresql_2_8_1_1" = callPackage
     ({ mkDerivation, aeson, base, blaze-builder, bytestring, conduit
      , containers, monad-logger, persistent, postgresql-libpq
      , postgresql-simple, resource-pool, resourcet, text, time
@@ -155520,8 +156567,8 @@ self: {
      }:
      mkDerivation {
        pname = "persistent-postgresql";
-       version = "2.8.0";
-       sha256 = "0dqdgw4sayq76hdib7sf27nzwcg1lbgr4l50kdyq8xlvi8yb5mk8";
+       version = "2.8.1.1";
+       sha256 = "1ikjcd1i33nf044gcjfk2jxppjwl14vn7yd7jwjci5w0vjx6fwqi";
        libraryHaskellDepends = [
          aeson base blaze-builder bytestring conduit containers monad-logger
          persistent postgresql-libpq postgresql-simple resource-pool
@@ -155644,7 +156691,6 @@ self: {
          monad-logger old-locale persistent resource-pool resourcet text
          time transformers unordered-containers
        ];
-       executableHaskellDepends = [ base monad-logger ];
        testHaskellDepends = [
          base hspec persistent persistent-template temporary text time
          transformers
@@ -155655,7 +156701,7 @@ self: {
        maintainers = with stdenv.lib.maintainers; [ psibi ];
      }) {};
 
-  "persistent-sqlite_2_8_0" = callPackage
+  "persistent-sqlite_2_8_1" = callPackage
     ({ mkDerivation, aeson, base, bytestring, conduit, containers
      , hspec, microlens-th, monad-logger, old-locale, persistent
      , persistent-template, resource-pool, resourcet, temporary, text
@@ -155663,8 +156709,8 @@ self: {
      }:
      mkDerivation {
        pname = "persistent-sqlite";
-       version = "2.8.0";
-       sha256 = "1vdsb271d17b0ip7z6mkbcw4iggafpaaimz6zzknjc4l409yswnb";
+       version = "2.8.1";
+       sha256 = "19iqpa99r4s14r2qmimqpv3b8qz3wm9arbkniccrj8bxlw1c8a4d";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -155672,7 +156718,6 @@ self: {
          old-locale persistent resource-pool resourcet text time
          transformers unliftio-core unordered-containers
        ];
-       executableHaskellDepends = [ base monad-logger ];
        testHaskellDepends = [
          base hspec persistent persistent-template temporary text time
          transformers
@@ -155692,30 +156737,6 @@ self: {
      }:
      mkDerivation {
        pname = "persistent-template";
-       version = "2.5.3";
-       sha256 = "1b8n99l2dh4ng1pf86541q5s2is30scnsx3p3vzh0kif9myrk5cy";
-       libraryHaskellDepends = [
-         aeson aeson-compat base bytestring containers ghc-prim
-         http-api-data monad-control monad-logger path-pieces persistent
-         tagged template-haskell text transformers unordered-containers
-       ];
-       testHaskellDepends = [
-         aeson base bytestring hspec persistent QuickCheck text transformers
-       ];
-       homepage = "http://www.yesodweb.com/book/persistent";
-       description = "Type-safe, non-relational, multi-backend persistence";
-       license = stdenv.lib.licenses.mit;
-       maintainers = with stdenv.lib.maintainers; [ psibi ];
-     }) {};
-
-  "persistent-template_2_5_3_1" = callPackage
-    ({ mkDerivation, aeson, aeson-compat, base, bytestring, containers
-     , ghc-prim, hspec, http-api-data, monad-control, monad-logger
-     , path-pieces, persistent, QuickCheck, tagged, template-haskell
-     , text, transformers, unordered-containers
-     }:
-     mkDerivation {
-       pname = "persistent-template";
        version = "2.5.3.1";
        sha256 = "0449piw3n02q7dag7k1pakfmzmf3ms4wk1qmnagczpm1ckajinwd";
        libraryHaskellDepends = [
@@ -155729,7 +156750,6 @@ self: {
        homepage = "http://www.yesodweb.com/book/persistent";
        description = "Type-safe, non-relational, multi-backend persistence";
        license = stdenv.lib.licenses.mit;
-       hydraPlatforms = stdenv.lib.platforms.none;
        maintainers = with stdenv.lib.maintainers; [ psibi ];
      }) {};
 
@@ -155770,6 +156790,7 @@ self: {
        homepage = "http://www.yesodweb.com/book/persistent";
        description = "Tests for Persistent";
        license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "persistent-vector" = callPackage
@@ -156271,20 +157292,22 @@ self: {
 
   "phoityne-vscode" = callPackage
     ({ mkDerivation, aeson, base, bytestring, Cabal, cmdargs, conduit
-     , conduit-extra, ConfigFile, containers, directory, filepath
-     , fsnotify, hslogger, MissingH, mtl, parsec, process, resourcet
-     , safe, split, text, transformers
+     , conduit-extra, ConfigFile, containers, data-default, directory
+     , filepath, fsnotify, hslogger, lens, MissingH, mtl, parsec
+     , process, resourcet, safe, safe-exceptions, split, text
+     , transformers
      }:
      mkDerivation {
        pname = "phoityne-vscode";
-       version = "0.0.20.0";
-       sha256 = "1k9vh2xyk2nwck1g86lxvbrab7ap5p8p9vhh7pj98a56wkvxmv7y";
+       version = "0.0.21.0";
+       sha256 = "190gqa5zi99a9rrazbcg2xmzx5bl304vb95w8z4qilggngq1y7df";
        isLibrary = false;
        isExecutable = true;
        executableHaskellDepends = [
          aeson base bytestring Cabal cmdargs conduit conduit-extra
-         ConfigFile containers directory filepath fsnotify hslogger MissingH
-         mtl parsec process resourcet safe split text transformers
+         ConfigFile containers data-default directory filepath fsnotify
+         hslogger lens MissingH mtl parsec process resourcet safe
+         safe-exceptions split text transformers
        ];
        homepage = "https://github.com/phoityne/phoityne-vscode";
        description = "Haskell Debug Adapter for Visual Studio Code";
@@ -156823,6 +157846,41 @@ self: {
        license = stdenv.lib.licenses.asl20;
      }) {};
 
+  "pinpon" = callPackage
+    ({ mkDerivation, aeson, aeson-pretty, amazonka, amazonka-core
+     , amazonka-sns, base, bytestring, containers, doctest, exceptions
+     , hpio, http-client, http-client-tls, http-types, lens, lucid, mtl
+     , network, optparse-applicative, optparse-text, protolude
+     , resourcet, servant, servant-client, servant-docs, servant-lucid
+     , servant-server, servant-swagger, servant-swagger-ui, swagger2
+     , text, time, transformers, transformers-base, wai, warp
+     }:
+     mkDerivation {
+       pname = "pinpon";
+       version = "0.2.0.1";
+       sha256 = "0l21lh66iwqk5bq2zxpjxp04gypcpy74xj4xnxmgbj7qzcxp9xha";
+       isLibrary = true;
+       isExecutable = true;
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         aeson aeson-pretty amazonka amazonka-core amazonka-sns base
+         bytestring containers exceptions http-client http-types lens lucid
+         mtl protolude resourcet servant servant-client servant-docs
+         servant-lucid servant-server servant-swagger servant-swagger-ui
+         swagger2 text time transformers transformers-base wai warp
+       ];
+       executableHaskellDepends = [
+         amazonka amazonka-sns base bytestring containers exceptions hpio
+         http-client http-client-tls http-types lens mtl network
+         optparse-applicative optparse-text protolude servant-client text
+         time transformers warp
+       ];
+       testHaskellDepends = [ base doctest protolude ];
+       homepage = "https://github.com/quixoftic/pinpon#readme";
+       description = "A gateway for various cloud notification services";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "pipe-enumerator" = callPackage
     ({ mkDerivation, base, enumerator, pipes, transformers }:
      mkDerivation {
@@ -157165,8 +158223,8 @@ self: {
     ({ mkDerivation, async, base, contravariant, pipes, stm, void }:
      mkDerivation {
        pname = "pipes-concurrency";
-       version = "2.0.8";
-       sha256 = "0ak6vnjl12q4615waifbpdxbm96yz5yzqzwjj1zwvvb2jfk5snwz";
+       version = "2.0.9";
+       sha256 = "1br0cssp4rdfh6lhvjql9ppjvcn0v6kpg1h1f1hi8vqb0c87nvb4";
        libraryHaskellDepends = [
          async base contravariant pipes stm void
        ];
@@ -157472,6 +158530,7 @@ self: {
        homepage = "https://github.com/boothead/pipes-kafka";
        description = "Kafka in the Pipes ecosystem";
        license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "pipes-key-value-csv" = callPackage
@@ -157910,9 +158969,6 @@ self: {
        libraryHaskellDepends = [
          base bytestring pipes pipes-safe semigroups zeromq4-haskell
        ];
-       executableHaskellDepends = [
-         base bytestring pipes pipes-safe semigroups zeromq4-haskell
-       ];
        homepage = "https://github.com/peddie/pipes-zeromq4";
        description = "Pipes integration for ZeroMQ messaging";
        license = stdenv.lib.licenses.bsd3;
@@ -159085,6 +160141,18 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "poll_0_0_0_1" = callPackage
+    ({ mkDerivation, base, enumset, utility-ht }:
+     mkDerivation {
+       pname = "poll";
+       version = "0.0.0.1";
+       sha256 = "0agdl2bxw7ca05kqyc8dix4kvjdh67i91hn1scmcngjd3gz8gzmr";
+       libraryHaskellDepends = [ base enumset utility-ht ];
+       description = "Bindings to poll.h";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "poly-arity" = callPackage
     ({ mkDerivation, base, constraints }:
      mkDerivation {
@@ -159934,8 +161002,8 @@ self: {
      }:
      mkDerivation {
        pname = "postgres-embedded";
-       version = "0.1.8";
-       sha256 = "06jxpf42rkw3yasknabp6zkns9y06pakkfrazqiwq2xk6kaj8h0n";
+       version = "0.2.0";
+       sha256 = "1xaf6iqlv1adg0xcmzj6ynfq3r43qafs98z9lfk2hms28g03a71y";
        libraryHaskellDepends = [
          base directory filepath network process
        ];
@@ -160543,8 +161611,8 @@ self: {
 
   "postie" = callPackage
     ({ mkDerivation, attoparsec, base, bytestring, cprng-aes
-     , data-default-class, mtl, network, pipes, pipes-bytestring
-     , pipes-parse, stringsearch, tls, transformers, uuid
+     , data-default-class, mtl, network, pipes, pipes-parse
+     , stringsearch, tls, transformers, uuid
      }:
      mkDerivation {
        pname = "postie";
@@ -160556,9 +161624,6 @@ self: {
          attoparsec base bytestring cprng-aes data-default-class mtl network
          pipes pipes-parse stringsearch tls transformers uuid
        ];
-       executableHaskellDepends = [
-         base bytestring data-default-class pipes pipes-bytestring tls
-       ];
        description = "SMTP server library to receive emails from within Haskell programs";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -160578,7 +161643,6 @@ self: {
          aeson attoparsec base bytestring containers http-client-tls
          http-types network-api-support text
        ];
-       executableHaskellDepends = [ base text ];
        homepage = "https://github.com/apiengine/postmark";
        description = "Library for postmarkapp.com HTTP Api";
        license = stdenv.lib.licenses.bsd3;
@@ -160635,19 +161699,18 @@ self: {
      }) {};
 
   "potoki" = callPackage
-    ({ mkDerivation, attoparsec, base, base-prelude, bug, bytestring
+    ({ mkDerivation, attoparsec, base, base-prelude, bytestring
      , directory, foldl, hashable, potoki-core, profunctors, QuickCheck
      , quickcheck-instances, random, rerebase, tasty, tasty-hunit
      , tasty-quickcheck, text, unagi-chan, unordered-containers, vector
      }:
      mkDerivation {
        pname = "potoki";
-       version = "0.6.4";
-       sha256 = "1w05m47cl9x7riy27jzaxkwpaigs09bfikpqaqa6ghvx20mgx4vl";
+       version = "0.7.2";
+       sha256 = "10yl08hcfgn0l15hr6n5ga91cla050lys7jyj4w0j3s3c9k2w3gd";
        libraryHaskellDepends = [
-         attoparsec base base-prelude bug bytestring directory foldl
-         hashable potoki-core profunctors text unagi-chan
-         unordered-containers vector
+         attoparsec base base-prelude bytestring directory foldl hashable
+         potoki-core profunctors text unagi-chan unordered-containers vector
        ];
        testHaskellDepends = [
          attoparsec QuickCheck quickcheck-instances random rerebase tasty
@@ -160665,8 +161728,8 @@ self: {
      }:
      mkDerivation {
        pname = "potoki-cereal";
-       version = "0.1";
-       sha256 = "04qfs8j2kgvavacpz7x9zdza0yfl4yw56g0bca28wh7q837y073y";
+       version = "0.1.3";
+       sha256 = "1r7plcki29gr9jx61qjx752zc9zh9yy47kznrs36q7jgjhnj6mqx";
        libraryHaskellDepends = [
          base base-prelude bytestring cereal potoki potoki-core text
        ];
@@ -160683,8 +161746,8 @@ self: {
      }:
      mkDerivation {
        pname = "potoki-core";
-       version = "1.2";
-       sha256 = "06d9hs15r6gr5yj9rcpw4klj3lxfjdd09nc0zwvmg1h3klqrqfxy";
+       version = "1.3";
+       sha256 = "0z6ld13kmkvamn8y39zqw0z4mkg5wi9mmh7kdav31wy46im03b9l";
        libraryHaskellDepends = [ base deque profunctors stm ];
        testHaskellDepends = [
          QuickCheck quickcheck-instances rerebase tasty tasty-hunit
@@ -160785,6 +161848,7 @@ self: {
        homepage = "https://github.com/agrafix/powerqueue#readme";
        description = "A distributed worker backend for powerqueu";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "powerqueue-levelmem" = callPackage
@@ -160862,13 +161926,12 @@ self: {
      }) {};
 
   "pqc" = callPackage
-    ({ mkDerivation, base, ChasingBottoms, QuickCheck, random, stm }:
+    ({ mkDerivation, base, QuickCheck, random, stm }:
      mkDerivation {
        pname = "pqc";
        version = "0.8";
        sha256 = "1n71qhlxn9js5cizyqdq9f7m08m5j0354871r8b47bnzdi2kqkc4";
        libraryHaskellDepends = [ base QuickCheck random stm ];
-       testHaskellDepends = [ base ChasingBottoms ];
        homepage = "http://hub.darcs.net/shelarcy/pqc";
        description = "Parallel batch driver for QuickCheck";
        license = stdenv.lib.licenses.bsd3;
@@ -160887,6 +161950,19 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "pqueue_1_4_1_1" = callPackage
+    ({ mkDerivation, base, deepseq, QuickCheck }:
+     mkDerivation {
+       pname = "pqueue";
+       version = "1.4.1.1";
+       sha256 = "1zvwm1zcqqq5n101s1brjhgbay8rf9fviq6gxbplf40i63m57p1x";
+       libraryHaskellDepends = [ base deepseq ];
+       testHaskellDepends = [ base deepseq QuickCheck ];
+       description = "Reliable, persistent, fast priority queues";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "pqueue-mtl" = callPackage
     ({ mkDerivation, base, containers, ghc-prim, MaybeT, mtl
      , stateful-mtl, uvector
@@ -160971,8 +162047,8 @@ self: {
      }:
      mkDerivation {
        pname = "preamble";
-       version = "0.0.58";
-       sha256 = "02nqrryi2mjp4zcail23rh0ysqnc8i97wzn77bq7ksimqwzynabq";
+       version = "0.0.59";
+       sha256 = "0i9blxkdjm4fm288qr6isl3jyjrw6x6x58z6lvaj62xr3y4rqd43";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -161141,8 +162217,8 @@ self: {
     ({ mkDerivation, base, hspec, regex-pcre-builtin }:
      mkDerivation {
        pname = "prefix-expression";
-       version = "1.2.3";
-       sha256 = "0hcp7wfgqcbqlkg60zy5c1b9gyvzkr678m4qpjxsv07x33h0xgnr";
+       version = "1.2.4";
+       sha256 = "03gnfh84vpd66i8mnnx5y1ci20p7ykic9cnnsvz3bddfvwp4silr";
        libraryHaskellDepends = [ base regex-pcre-builtin ];
        testHaskellDepends = [ base hspec ];
        homepage = "https://github.com/VonFry/prefix-expression";
@@ -161168,10 +162244,9 @@ self: {
      }) {};
 
   "prefork" = callPackage
-    ({ mkDerivation, async, base, blaze-builder, bytestring, cab
-     , cmdargs, containers, data-default, directory, filepath, hspec
-     , http-types, network, process, stm, system-argv0, system-filepath
-     , unix, wai, warp
+    ({ mkDerivation, base, cab, containers, data-default, directory
+     , filepath, hspec, process, stm, system-argv0, system-filepath
+     , unix
      }:
      mkDerivation {
        pname = "prefork";
@@ -161183,10 +162258,6 @@ self: {
          base containers data-default process stm system-argv0
          system-filepath unix
        ];
-       executableHaskellDepends = [
-         async base blaze-builder bytestring cmdargs containers http-types
-         network stm unix wai warp
-       ];
        testHaskellDepends = [
          base cab containers directory filepath hspec process stm unix
        ];
@@ -161574,9 +162645,31 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "pretty-show_1_7" = callPackage
+    ({ mkDerivation, array, base, filepath, ghc-prim, happy
+     , haskell-lexer, pretty, text
+     }:
+     mkDerivation {
+       pname = "pretty-show";
+       version = "1.7";
+       sha256 = "0br7pkxqqqhby2j2v1g847lgqsrasx56g1jw3dhmjh4flzs6warq";
+       isLibrary = true;
+       isExecutable = true;
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         array base filepath ghc-prim haskell-lexer pretty text
+       ];
+       libraryToolDepends = [ happy ];
+       executableHaskellDepends = [ base ];
+       homepage = "http://wiki.github.com/yav/pretty-show";
+       description = "Tools for working with derived `Show` instances and generic inspection of values";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "pretty-simple" = callPackage
-    ({ mkDerivation, aeson, ansi-terminal, base, bytestring, containers
-     , criterion, doctest, Glob, mtl, parsec, text, transformers
+    ({ mkDerivation, ansi-terminal, base, containers, criterion
+     , doctest, Glob, mtl, parsec, text, transformers
      }:
      mkDerivation {
        pname = "pretty-simple";
@@ -161587,7 +162680,6 @@ self: {
        libraryHaskellDepends = [
          ansi-terminal base containers mtl parsec text transformers
        ];
-       executableHaskellDepends = [ aeson base bytestring text ];
        testHaskellDepends = [ base doctest Glob ];
        benchmarkHaskellDepends = [ base criterion ];
        homepage = "https://github.com/cdepillabout/pretty-simple";
@@ -161670,8 +162762,7 @@ self: {
   "prettyprinter" = callPackage
     ({ mkDerivation, ansi-wl-pprint, base, bytestring, containers
      , criterion, deepseq, doctest, mtl, pgp-wordlist, QuickCheck
-     , random, tasty, tasty-hunit, tasty-quickcheck, template-haskell
-     , text, transformers
+     , random, tasty, tasty-hunit, tasty-quickcheck, text, transformers
      }:
      mkDerivation {
        pname = "prettyprinter";
@@ -161680,7 +162771,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base text ];
-       executableHaskellDepends = [ base template-haskell text ];
        testHaskellDepends = [
          base bytestring doctest pgp-wordlist tasty tasty-hunit
          tasty-quickcheck text
@@ -161694,6 +162784,32 @@ self: {
        license = stdenv.lib.licenses.bsd2;
      }) {};
 
+  "prettyprinter_1_2_0_1" = callPackage
+    ({ mkDerivation, ansi-wl-pprint, base, bytestring, containers
+     , criterion, deepseq, doctest, mtl, pgp-wordlist, QuickCheck
+     , random, tasty, tasty-hunit, tasty-quickcheck, text, transformers
+     }:
+     mkDerivation {
+       pname = "prettyprinter";
+       version = "1.2.0.1";
+       sha256 = "0rh5bb6inq4yvv6r53sc1q3msmpvjcq8fw4sn3vwivrq44c7nf8i";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [ base text ];
+       testHaskellDepends = [
+         base bytestring doctest pgp-wordlist tasty tasty-hunit
+         tasty-quickcheck text
+       ];
+       benchmarkHaskellDepends = [
+         ansi-wl-pprint base containers criterion deepseq mtl QuickCheck
+         random text transformers
+       ];
+       homepage = "http://github.com/quchen/prettyprinter";
+       description = "A modern, easy to use, well-documented, extensible prettyprinter";
+       license = stdenv.lib.licenses.bsd2;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "prettyprinter-ansi-terminal" = callPackage
     ({ mkDerivation, ansi-terminal, base, doctest, prettyprinter, text
      }:
@@ -161716,8 +162832,8 @@ self: {
        pname = "prettyprinter-compat-annotated-wl-pprint";
        version = "1";
        sha256 = "0zpmpbpnyxqswfb7gdj0kwz7hw606fj1iwkpl1qv0xcxk6n9n99c";
-       revision = "2";
-       editedCabalFile = "175bchsbx8vws1gx83z9f0l30p95353l0gyds5b0k5b5sj4fzw13";
+       revision = "3";
+       editedCabalFile = "0vzi7id60pfj35xp61akzvfx9x6py45r5b8343i48ljpir91rvgw";
        libraryHaskellDepends = [ base prettyprinter text ];
        homepage = "http://github.com/quchen/prettyprinter";
        description = "Prettyprinter compatibility module for previous users of the annotated-wl-pprint package";
@@ -161732,6 +162848,8 @@ self: {
        pname = "prettyprinter-compat-ansi-wl-pprint";
        version = "1.0.1";
        sha256 = "0gzpjddnxl4z8pvb0lyal13jbr94dk900k8g4qwcq9fs26vnnb81";
+       revision = "1";
+       editedCabalFile = "0rzvap56ygygzs95091ipmcdc7n76sczc2dk88g4nr7zskb2nf1k";
        libraryHaskellDepends = [
          base prettyprinter prettyprinter-ansi-terminal text
        ];
@@ -161746,8 +162864,8 @@ self: {
        pname = "prettyprinter-compat-wl-pprint";
        version = "1.0.0.1";
        sha256 = "17jj8m9s3cp1s1szpy67g7wni9ssid78jqksh3aym7p6ci81y8km";
-       revision = "2";
-       editedCabalFile = "0j495j9crv6qi7rq044x6bx8688zqybx5w02cbv54w208ii1pzcl";
+       revision = "3";
+       editedCabalFile = "0cb1i1hmr6wl8lacy3w822h273lapqhp537snxgbmhf9xvfckbpr";
        libraryHaskellDepends = [ base prettyprinter text ];
        homepage = "http://github.com/quchen/prettyprinter";
        description = "Prettyprinter compatibility module for previous users of the wl-pprint package";
@@ -162166,10 +163284,8 @@ self: {
      }:
      mkDerivation {
        pname = "probable";
-       version = "0.1.2";
-       sha256 = "0lypxz3lz4gj5x98k7mwg3xagjld0qhzrxdk8l4gjxj77m00hkfz";
-       revision = "1";
-       editedCabalFile = "1iwv4ygfm53q3jyiiniqhsixps549h9c2apif10pjg5jib04yv85";
+       version = "0.1.3";
+       sha256 = "196m3v30818q034x7jdnqdwfqffx5pfj64yyw0q2blhwzkhc0f9n";
        libraryHaskellDepends = [
          base mtl mwc-random primitive statistics transformers vector
        ];
@@ -162256,24 +163372,6 @@ self: {
      }:
      mkDerivation {
        pname = "process-extras";
-       version = "0.7.3";
-       sha256 = "0hyrqz2dinvql6r9ldd2q35zkavjwqadw13zqzcwrdhq8myhawzb";
-       libraryHaskellDepends = [
-         base bytestring data-default deepseq generic-deriving ListLike mtl
-         process text
-       ];
-       testHaskellDepends = [ base HUnit ];
-       homepage = "https://github.com/seereason/process-extras";
-       description = "Process extras";
-       license = stdenv.lib.licenses.mit;
-     }) {};
-
-  "process-extras_0_7_4" = callPackage
-    ({ mkDerivation, base, bytestring, data-default, deepseq
-     , generic-deriving, HUnit, ListLike, mtl, process, text
-     }:
-     mkDerivation {
-       pname = "process-extras";
        version = "0.7.4";
        sha256 = "0klqgr37f1z2z6i0a9b0giapmq0p35l5k9kz1p7f0k1597w7agi9";
        libraryHaskellDepends = [
@@ -162284,7 +163382,6 @@ self: {
        homepage = "https://github.com/seereason/process-extras";
        description = "Process extras";
        license = stdenv.lib.licenses.mit;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "process-iterio" = callPackage
@@ -162745,7 +163842,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base io-reactive ];
-       executableHaskellDepends = [ base ];
        description = "Progressbar API";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -163162,8 +164258,8 @@ self: {
      }:
      mkDerivation {
        pname = "propellor";
-       version = "5.3.0";
-       sha256 = "09qkh6d2jbn8f5miaqh5mlxh36146wpfm61k4xdz3kdxmg78s140";
+       version = "5.3.2";
+       sha256 = "1jv4yzls8l4blnvmrrbwljx999g92gklpj52pn1r48sh40sqa7l1";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -163260,7 +164356,7 @@ self: {
      }) {};
 
   "proteaaudio" = callPackage
-    ({ mkDerivation, base, bytestring, c2hs, filepath, libpulseaudio }:
+    ({ mkDerivation, base, bytestring, c2hs, libpulseaudio }:
      mkDerivation {
        pname = "proteaaudio";
        version = "0.7.0.1";
@@ -163270,7 +164366,6 @@ self: {
        libraryHaskellDepends = [ base bytestring ];
        librarySystemDepends = [ libpulseaudio ];
        libraryToolDepends = [ c2hs ];
-       executableHaskellDepends = [ base bytestring filepath ];
        description = "Simple audio library for Windows, Linux, OSX";
        license = stdenv.lib.licenses.bsd3;
      }) {inherit (pkgs) libpulseaudio;};
@@ -163497,6 +164592,24 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "protocol-buffers_2_4_7" = callPackage
+    ({ mkDerivation, array, base, binary, bytestring, containers
+     , directory, filepath, mtl, parsec, syb, utf8-string
+     }:
+     mkDerivation {
+       pname = "protocol-buffers";
+       version = "2.4.7";
+       sha256 = "1db2r961qmrcvcqs53imjw16cawn7hjcicxhygszk0mg538v7rh9";
+       libraryHaskellDepends = [
+         array base binary bytestring containers directory filepath mtl
+         parsec syb utf8-string
+       ];
+       homepage = "https://github.com/k-bx/protocol-buffers";
+       description = "Parse Google Protocol Buffer specifications";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "protocol-buffers-descriptor" = callPackage
     ({ mkDerivation, base, bytestring, containers, protocol-buffers }:
      mkDerivation {
@@ -163512,6 +164625,22 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "protocol-buffers-descriptor_2_4_7" = callPackage
+    ({ mkDerivation, base, bytestring, containers, protocol-buffers }:
+     mkDerivation {
+       pname = "protocol-buffers-descriptor";
+       version = "2.4.7";
+       sha256 = "1k11bgwg2345y4a7ib6h3410y6088whlxc6s9iy0whpbkhwi7lq0";
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         base bytestring containers protocol-buffers
+       ];
+       homepage = "https://github.com/k-bx/protocol-buffers";
+       description = "Text.DescriptorProto.Options and code generated from the Google Protocol Buffer specification";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "protocol-buffers-descriptor-fork" = callPackage
     ({ mkDerivation, base, bytestring, containers
      , protocol-buffers-fork
@@ -163590,6 +164719,8 @@ self: {
        pname = "protolude";
        version = "0.2.1";
        sha256 = "1r2baxx6q4z75sswirlqsnyynk4i7amfmpzajggh31fbz13hxgxx";
+       revision = "1";
+       editedCabalFile = "03kaarc0k64zrkqkh9q38919pcaya7ngzjhb3pbapbjm7np2ynpd";
        libraryHaskellDepends = [
          array async base bytestring containers deepseq ghc-prim hashable
          mtl mtl-compat safe stm text transformers transformers-compat
@@ -163746,6 +164877,8 @@ self: {
        pname = "pseudo-boolean";
        version = "0.1.6.0";
        sha256 = "1v28vbhcrx0mvciazlanwyaxwav0gfjc7sxz7adgims7mj64g1ra";
+       revision = "1";
+       editedCabalFile = "11n7wcfpahbyg8lmq90vvq11fm2ls4761qf9q7pkbvd7vkm6by2n";
        libraryHaskellDepends = [
          attoparsec base bytestring bytestring-builder containers deepseq
          dlist hashable megaparsec parsec void
@@ -164181,7 +165314,6 @@ self: {
        isExecutable = true;
        libraryHaskellDepends = [ base containers stm unix ];
        librarySystemDepends = [ libpulseaudio ];
-       executableHaskellDepends = [ base ];
        description = "A low-level (incomplete) wrapper around the pulseaudio client asynchronous api";
        license = stdenv.lib.licenses.lgpl3;
      }) {inherit (pkgs) libpulseaudio;};
@@ -164466,6 +165598,29 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "purescript-tsd-gen" = callPackage
+    ({ mkDerivation, aeson, base, bytestring, containers, directory
+     , filepath, mtl, optparse-applicative, purescript, text
+     }:
+     mkDerivation {
+       pname = "purescript-tsd-gen";
+       version = "0.1.0.0";
+       sha256 = "0wnj2gvibwcdpbwz9hbn773ircp8rm85klb318933s27fl2z0zfb";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         aeson base bytestring containers directory filepath mtl purescript
+         text
+       ];
+       executableHaskellDepends = [
+         aeson base bytestring containers directory filepath mtl
+         optparse-applicative purescript text
+       ];
+       homepage = "https://github.com/minoki/purescript-tsd-gen#readme";
+       description = "TypeScript Declaration File (.d.ts) generator for PureScript";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "pursuit-client" = callPackage
     ({ mkDerivation, base, http-client, lens, taggy-lens, text, wreq }:
      mkDerivation {
@@ -164597,8 +165752,8 @@ self: {
      }:
      mkDerivation {
        pname = "pushbullet-types";
-       version = "0.4.0.0";
-       sha256 = "0fds6lhkmyfs8hrnaq29fbglcmampa4n8j93x1jkynxbp1in66z6";
+       version = "0.4.0.2";
+       sha256 = "0r6cg0g98b7zzf4sjl4mrpnwmffhz2dnba9bgjw3943xf06afnn1";
        libraryHaskellDepends = [
          aeson base http-api-data microlens microlens-th scientific text
          time unordered-containers
@@ -164634,34 +165789,8 @@ self: {
      }:
      mkDerivation {
        pname = "pusher-http-haskell";
-       version = "1.5.1.0";
-       sha256 = "1mnigsf10jxqsvjr1vbizxjrf97w3cx54xy850mj3b8i34929bmh";
-       libraryHaskellDepends = [
-         aeson base base16-bytestring bytestring cryptonite hashable
-         http-client http-types memory text time transformers
-         unordered-containers vector
-       ];
-       testHaskellDepends = [
-         aeson base base16-bytestring bytestring cryptonite hspec
-         http-client http-types QuickCheck scientific text time transformers
-         unordered-containers vector
-       ];
-       homepage = "https://github.com/pusher-community/pusher-http-haskell";
-       description = "Haskell client library for the Pusher HTTP API";
-       license = stdenv.lib.licenses.mit;
-       hydraPlatforms = stdenv.lib.platforms.none;
-     }) {};
-
-  "pusher-http-haskell_1_5_1_1" = callPackage
-    ({ mkDerivation, aeson, base, base16-bytestring, bytestring
-     , cryptonite, hashable, hspec, http-client, http-types, memory
-     , QuickCheck, scientific, text, time, transformers
-     , unordered-containers, vector
-     }:
-     mkDerivation {
-       pname = "pusher-http-haskell";
-       version = "1.5.1.1";
-       sha256 = "0j8gsarczvdidri63s162flzdkb6w0sysawairlxmmgcdbybfci5";
+       version = "1.5.1.2";
+       sha256 = "1jrb0ni157a9wa5mbqz1dmd1i7nkjh1nhjyvx52mbk530hslcnnn";
        libraryHaskellDepends = [
          aeson base base16-bytestring bytestring cryptonite hashable
          http-client http-types memory text time transformers
@@ -165133,6 +166262,24 @@ self: {
        license = stdenv.lib.licenses.publicDomain;
      }) {};
 
+  "qm-interpolated-string_0_3_0_0" = callPackage
+    ({ mkDerivation, base, bytestring, haskell-src-meta, hspec
+     , template-haskell, text
+     }:
+     mkDerivation {
+       pname = "qm-interpolated-string";
+       version = "0.3.0.0";
+       sha256 = "1brbs4qwvb16bkmcg51spjjrzc83hwgi1fbsix25vrri2myk6sz8";
+       libraryHaskellDepends = [
+         base bytestring haskell-src-meta template-haskell text
+       ];
+       testHaskellDepends = [ base hspec ];
+       homepage = "https://github.com/unclechu/haskell-qm-interpolated-string";
+       description = "Implementation of interpolated multiline strings";
+       license = stdenv.lib.licenses.publicDomain;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "qq-literals" = callPackage
     ({ mkDerivation, base, network-uri, template-haskell }:
      mkDerivation {
@@ -165609,7 +166756,6 @@ self: {
        libraryHaskellDepends = [
          ansi-terminal base readline terminal-size
        ];
-       executableHaskellDepends = [ base ];
        homepage = "https://github.com/yamadapc/haskell-questioner.git";
        description = "A package for prompting values from the command-line";
        license = stdenv.lib.licenses.mit;
@@ -165695,9 +166841,8 @@ self: {
 
   "quickbooks" = callPackage
     ({ mkDerivation, aeson, authenticate-oauth, base, bytestring
-     , doctest, email-validate, fast-logger, http-client
-     , http-client-tls, http-types, interpolate, old-locale, text, thyme
-     , yaml
+     , email-validate, fast-logger, http-client, http-client-tls
+     , http-types, interpolate, old-locale, text, thyme, yaml
      }:
      mkDerivation {
        pname = "quickbooks";
@@ -165708,7 +166853,6 @@ self: {
          http-client http-client-tls http-types interpolate old-locale text
          thyme yaml
        ];
-       testHaskellDepends = [ base doctest ];
        description = "QuickBooks API binding";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -165749,6 +166893,24 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "quickcheck-arbitrary-template" = callPackage
+    ({ mkDerivation, base, QuickCheck, safe, tasty, tasty-golden
+     , tasty-hunit, tasty-quickcheck, template-haskell
+     }:
+     mkDerivation {
+       pname = "quickcheck-arbitrary-template";
+       version = "0.2.0.0";
+       sha256 = "1bn0g3gg7cpjwap1vgvahw91yjn0v8sy1hiy60w54gdg5rrll5j9";
+       libraryHaskellDepends = [ base QuickCheck safe template-haskell ];
+       testHaskellDepends = [
+         base QuickCheck safe tasty tasty-golden tasty-hunit
+         tasty-quickcheck template-haskell
+       ];
+       homepage = "https://github.com/plow-technologies/quickcheck-arbitrary-adt#readme";
+       description = "Generate QuickCheck Gen for Sum Types";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "quickcheck-assertions" = callPackage
     ({ mkDerivation, base, hspec, ieee754, pretty-show, QuickCheck }:
      mkDerivation {
@@ -165768,23 +166930,6 @@ self: {
      }:
      mkDerivation {
        pname = "quickcheck-classes";
-       version = "0.3.1";
-       sha256 = "0xcjm55aprds4x1jlrj3izgwxpqv8z19sbiqfn8lvx6b8yc61f7f";
-       libraryHaskellDepends = [
-         aeson base prim-array primitive QuickCheck transformers
-       ];
-       testHaskellDepends = [ aeson base primitive QuickCheck vector ];
-       homepage = "https://github.com/andrewthad/quickcheck-classes#readme";
-       description = "QuickCheck common typeclasses";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "quickcheck-classes_0_3_2" = callPackage
-    ({ mkDerivation, aeson, base, prim-array, primitive, QuickCheck
-     , transformers, vector
-     }:
-     mkDerivation {
-       pname = "quickcheck-classes";
        version = "0.3.2";
        sha256 = "10z65dxm0jply0zbx1kpxpiir3z85c9133hkiqnra6sqz13njdz4";
        libraryHaskellDepends = [
@@ -165794,7 +166939,6 @@ self: {
        homepage = "https://github.com/andrewthad/quickcheck-classes#readme";
        description = "QuickCheck common typeclasses";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "quickcheck-combinators" = callPackage
@@ -165886,17 +167030,12 @@ self: {
      }) {};
 
   "quickcheck-property-monad" = callPackage
-    ({ mkDerivation, base, directory, doctest, either, filepath
-     , QuickCheck, transformers
-     }:
+    ({ mkDerivation, base, either, QuickCheck, transformers }:
      mkDerivation {
        pname = "quickcheck-property-monad";
        version = "0.2.4";
        sha256 = "0sp7592jfh6i8xsykl2lv8bspnp755fnpqvqa09dhwq6hm0r1r9c";
        libraryHaskellDepends = [ base either QuickCheck transformers ];
-       testHaskellDepends = [
-         base directory doctest filepath QuickCheck
-       ];
        homepage = "http://github.com/bennofs/quickcheck-property-monad/";
        description = "A monad for generating QuickCheck properties without Arbitrary instances";
        license = stdenv.lib.licenses.bsd3;
@@ -166115,8 +167254,7 @@ self: {
      }) {};
 
   "quickpull" = callPackage
-    ({ mkDerivation, barecheck, base, directory, filepath, QuickCheck
-     }:
+    ({ mkDerivation, base, directory, filepath, QuickCheck }:
      mkDerivation {
        pname = "quickpull";
        version = "0.4.2.2";
@@ -166124,9 +167262,7 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base directory filepath QuickCheck ];
-       executableHaskellDepends = [
-         barecheck base directory filepath QuickCheck
-       ];
+       executableHaskellDepends = [ base directory filepath QuickCheck ];
        testHaskellDepends = [ base directory filepath QuickCheck ];
        homepage = "http://www.github.com/massysett/quickpull";
        description = "Generate Main module with QuickCheck tests";
@@ -167425,8 +168561,8 @@ self: {
     ({ mkDerivation, async, base, containers, foreign-store, stm }:
      mkDerivation {
        pname = "rapid";
-       version = "0.1.3";
-       sha256 = "0n4py9ndri6xy3n2rkr78f0y146didxg3625nhm72jsqcd1qjfhn";
+       version = "0.1.4";
+       sha256 = "0f86j4r3sm74w49v9x9s58wahgcgick6z7awl6piq83iqaiy4sh7";
        libraryHaskellDepends = [
          async base containers foreign-store stm
        ];
@@ -167854,6 +168990,7 @@ self: {
        homepage = "https://github.com/tfausak/rattletrap#readme";
        description = "Parse and generate Rocket League replays";
        license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "rattletrap_4_0_5" = callPackage
@@ -168110,10 +169247,10 @@ self: {
      }:
      mkDerivation {
        pname = "rcu";
-       version = "0.2.1";
-       sha256 = "114w0nhlcg6wd9v6xg0ax74y5xbwb408b37hdkra863xr7dibdp0";
+       version = "0.2.2";
+       sha256 = "0lj88xif38zh1qkpfzyarm36khzavqsl8chjma062b1pvhhlc9lk";
        revision = "1";
-       editedCabalFile = "138vbjy6z2lh4x4icdssh0xz0rcwiw4lczcb3w375cnyjjn3b6ly";
+       editedCabalFile = "0kq7g4wplri8xnp6b1xvxd74vl60dhdkz0p3994swy7dbk8b7vic";
        isLibrary = true;
        isExecutable = true;
        setupHaskellDepends = [ base Cabal cabal-doctest ];
@@ -168258,7 +169395,6 @@ self: {
          aeson base bytestring deepseq mtl template-haskell text time
          unordered-containers
        ];
-       executableHaskellDepends = [ aeson base deepseq text time ];
        homepage = "https://bitbucket.org/wuzzeb/react-flux";
        description = "A binding to React based on the Flux application architecture for GHCJS";
        license = stdenv.lib.licenses.bsd3;
@@ -168567,16 +169703,17 @@ self: {
     ({ mkDerivation, base, containers, data-accessor, event-list
      , explicit-exception, extensible-exceptions, jack, midi
      , non-negative, random, reactive-banana-bunch, reactive-midyim
-     , transformers, utility-ht
+     , semigroups, transformers, utility-ht
      }:
      mkDerivation {
        pname = "reactive-jack";
-       version = "0.4";
-       sha256 = "13j51qg9ph4vq5v4z94q8i5lfd8sr3v6ln1740g24v90j28gh87i";
+       version = "0.4.1";
+       sha256 = "124fpfv486dm8cpgfdnrmckkk8y6ia4nwzapvnfghkslizzlbfab";
        libraryHaskellDepends = [
          base containers data-accessor event-list explicit-exception
          extensible-exceptions jack midi non-negative random
-         reactive-banana-bunch reactive-midyim transformers utility-ht
+         reactive-banana-bunch reactive-midyim semigroups transformers
+         utility-ht
        ];
        homepage = "http://www.haskell.org/haskellwiki/Reactive-balsa";
        description = "Process MIDI events via reactive-banana and JACK";
@@ -168586,16 +169723,17 @@ self: {
   "reactive-midyim" = callPackage
     ({ mkDerivation, base, containers, data-accessor
      , data-accessor-transformers, event-list, midi, non-negative
-     , random, reactive-banana-bunch, transformers, utility-ht
+     , random, reactive-banana-bunch, semigroups, transformers
+     , utility-ht
      }:
      mkDerivation {
        pname = "reactive-midyim";
-       version = "0.4.0.1";
-       sha256 = "1ck2f8nhlhcw9vyh42svp94xrnd4jcvic2kzxikw50vjcd4w6rrf";
+       version = "0.4.1";
+       sha256 = "1dx07c4d4sw7a797d1ap9ja48lhx37hbizhajgcf1qpilxgd4lvv";
        libraryHaskellDepends = [
          base containers data-accessor data-accessor-transformers event-list
-         midi non-negative random reactive-banana-bunch transformers
-         utility-ht
+         midi non-negative random reactive-banana-bunch semigroups
+         transformers utility-ht
        ];
        homepage = "http://www.haskell.org/haskellwiki/Reactive-balsa";
        description = "Process MIDI events via reactive-banana";
@@ -169123,8 +170261,8 @@ self: {
      }:
      mkDerivation {
        pname = "recursion-schemes-ext";
-       version = "1.0.0.1";
-       sha256 = "1jd3dsns2ahsbkrzcp955bbq4xyhr0rmip3y6dvsgs4qjs0jlvbi";
+       version = "1.0.0.2";
+       sha256 = "1k7jjargdhc5q7ay2r07fwd9wgcs249p1r1rr48qlw6lsccrparw";
        libraryHaskellDepends = [
          base composition-prelude lens recursion-schemes
        ];
@@ -169965,9 +171103,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base data-default exceptions lens mtl ];
-       executableHaskellDepends = [
-         base data-default exceptions lens mtl
-       ];
        homepage = "https://github.com/konn/refresht#readme";
        description = "Environment Monad with automatic resource refreshment";
        license = stdenv.lib.licenses.bsd3;
@@ -171000,8 +172135,8 @@ self: {
 
   "relational-record-examples" = callPackage
     ({ mkDerivation, base, HDBC, HDBC-session, HDBC-sqlite3
-     , persistable-record, product-isomorphic, relational-query
-     , relational-query-HDBC, relational-schemas, template-haskell, time
+     , persistable-record, relational-query, relational-query-HDBC
+     , relational-schemas, template-haskell
      }:
      mkDerivation {
        pname = "relational-record-examples";
@@ -171014,9 +172149,6 @@ self: {
          relational-query relational-query-HDBC relational-schemas
          template-haskell
        ];
-       executableHaskellDepends = [
-         base product-isomorphic relational-query template-haskell time
-       ];
        description = "Examples of Haskell Relationa Record";
        license = stdenv.lib.licenses.bsd3;
      }) {};
@@ -171614,9 +172746,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base hsndfile repa ];
-       executableHaskellDepends = [
-         base hsndfile hsndfile-vector repa vector
-       ];
        testHaskellDepends = [
          base directory filepath hsndfile hsndfile-vector repa vector
        ];
@@ -171884,6 +173013,8 @@ self: {
        pname = "req";
        version = "1.0.0";
        sha256 = "1s2yd61pw316llxyap7qwi18vrqxl6hhsmbgr79chjv5g119c087";
+       revision = "1";
+       editedCabalFile = "18bs1mcr454dgczzv8ahxps5lhba8wgls34cccg5aqdfhglprphk";
        enableSeparateDataOutput = true;
        libraryHaskellDepends = [
          aeson authenticate-oauth base blaze-builder bytestring
@@ -171928,6 +173059,26 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "req-url-extra" = callPackage
+    ({ mkDerivation, aeson, base, data-default-class, hspec, modern-uri
+     , req, text
+     }:
+     mkDerivation {
+       pname = "req-url-extra";
+       version = "0.1.0.0";
+       sha256 = "113xsf37kra3k3jhf2wh37rsgphxz24rsn3dy8zw1cwzsim2dpmk";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [ base modern-uri req ];
+       executableHaskellDepends = [
+         aeson base data-default-class modern-uri req text
+       ];
+       testHaskellDepends = [ base hspec modern-uri req ];
+       homepage = "https://github.com/rcook/req-url-extra#readme";
+       description = "Provides URI/URL helper functions for use with Req";
+       license = stdenv.lib.licenses.mit;
+     }) {};
+
   "reqcatcher" = callPackage
     ({ mkDerivation, base, http-client, http-types, HUnit, lens
      , network, tasty, tasty-hunit, text, wai, warp, wreq
@@ -172594,9 +173745,9 @@ self: {
      }) {};
 
   "rethinkdb" = callPackage
-    ({ mkDerivation, aeson, async, attoparsec, base, base64-bytestring
-     , binary, bytestring, containers, criterion, data-default, doctest
-     , mtl, network, scientific, text, time, unordered-containers
+    ({ mkDerivation, aeson, async, base, base64-bytestring, binary
+     , bytestring, containers, criterion, data-default, doctest, mtl
+     , network, scientific, text, time, unordered-containers
      , utf8-string, vector
      }:
      mkDerivation {
@@ -172610,7 +173761,6 @@ self: {
          data-default mtl network scientific text time unordered-containers
          utf8-string vector
        ];
-       executableHaskellDepends = [ attoparsec base text ];
        testHaskellDepends = [ base doctest ];
        benchmarkHaskellDepends = [ aeson async base criterion text ];
        homepage = "http://github.com/atnnn/haskell-rethinkdb";
@@ -172687,18 +173837,19 @@ self: {
 
   "retry" = callPackage
     ({ mkDerivation, base, data-default-class, exceptions, ghc-prim
-     , hspec, HUnit, mtl, QuickCheck, random, stm, time, transformers
+     , hedgehog, HUnit, mtl, random, stm, tasty, tasty-hedgehog
+     , tasty-hunit, time, transformers
      }:
      mkDerivation {
        pname = "retry";
-       version = "0.7.5.1";
-       sha256 = "116fjfxdyqrk3079hqcil0dv7r2fw6x64pjwfxhckpxqavxza7sk";
+       version = "0.7.6.0";
+       sha256 = "1p6x6djd6cvsf03pxd9ky7rpzrzs0jcapmyap8z55aziasr3xk7n";
        libraryHaskellDepends = [
          base data-default-class exceptions ghc-prim random transformers
        ];
        testHaskellDepends = [
-         base data-default-class exceptions ghc-prim hspec HUnit mtl
-         QuickCheck random stm time transformers
+         base data-default-class exceptions ghc-prim hedgehog HUnit mtl
+         random stm tasty tasty-hedgehog tasty-hunit time transformers
        ];
        homepage = "http://github.com/Soostone/retry";
        description = "Retry combinators for monadic actions that may fail";
@@ -172868,27 +174019,29 @@ self: {
      }) {};
 
   "rfc" = callPackage
-    ({ mkDerivation, aeson, aeson-diff, async, base, bifunctors, binary
-     , blaze-html, classy-prelude, containers, data-default, exceptions
-     , hedis, http-api-data, http-client-tls, http-types, lens
-     , lifted-async, markdown, monad-control, postgresql-simple
+    ({ mkDerivation, aeson, aeson-diff, base, bifunctors, binary
+     , blaze-html, classy-prelude, containers, data-default
+     , freer-simple, hedis, http-api-data, http-client, http-client-tls
+     , http-types, lens, lifted-async, markdown, monad-control
+     , natural-transformation, network-uri, postgresql-simple
      , resource-pool, servant, servant-blaze, servant-client
      , servant-docs, servant-server, servant-swagger, simple-logger
      , string-conversions, swagger2, temporary, text, time-units
-     , unordered-containers, url, uuid-types, vector, wai, wai-cors
-     , wai-extra, wreq
+     , unliftio, unliftio-core, unordered-containers, url, uuid-types
+     , vector, wai, wai-cors, wai-extra, wreq
      }:
      mkDerivation {
        pname = "rfc";
-       version = "0.0.0.17";
-       sha256 = "0aqw2b2ivk16h156baj21jg5x5via9dn645500zl53zn05py6bng";
-       libraryHaskellDepends = [
-         aeson aeson-diff async base bifunctors binary blaze-html
-         classy-prelude containers data-default exceptions hedis
-         http-api-data http-client-tls http-types lens lifted-async markdown
-         monad-control postgresql-simple resource-pool servant servant-blaze
-         servant-client servant-docs servant-server servant-swagger
-         simple-logger string-conversions swagger2 temporary text time-units
+       version = "0.0.0.24";
+       sha256 = "05spf71r2zyc9pyx5kr2jsamyzga1y46831n6fmhad98bjswgr6q";
+       libraryHaskellDepends = [
+         aeson aeson-diff base bifunctors binary blaze-html classy-prelude
+         containers data-default freer-simple hedis http-api-data
+         http-client http-client-tls http-types lens lifted-async markdown
+         monad-control natural-transformation network-uri postgresql-simple
+         resource-pool servant servant-blaze servant-client servant-docs
+         servant-server servant-swagger simple-logger string-conversions
+         swagger2 temporary text time-units unliftio unliftio-core
          unordered-containers url uuid-types vector wai wai-cors wai-extra
          wreq
        ];
@@ -172943,7 +174096,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base bytestring containers ];
-       executableHaskellDepends = [ base bytestring containers ];
        description = "Simple unicode collation as per RFC5051";
        license = stdenv.lib.licenses.bsd3;
      }) {};
@@ -173046,6 +174198,40 @@ self: {
        license = "unknown";
      }) {};
 
+  "riak_1_1_2_4" = callPackage
+    ({ mkDerivation, aeson, async, attoparsec, base, bifunctors, binary
+     , blaze-builder, bytestring, containers, criterion
+     , data-default-class, deepseq, enclosed-exceptions, exceptions
+     , hashable, HUnit, mersenne-random-pure64, monad-control, mtl
+     , network, process, protocol-buffers, pureMD5, QuickCheck, random
+     , resource-pool, riak-protobuf, semigroups, stm, tasty, tasty-hunit
+     , tasty-quickcheck, template-haskell, text, time, transformers
+     , transformers-base, unordered-containers, vector, yaml
+     }:
+     mkDerivation {
+       pname = "riak";
+       version = "1.1.2.4";
+       sha256 = "1j67p29jnw6zy3294qwsc947akdk8xawa426fvnflbba5lmzxial";
+       libraryHaskellDepends = [
+         aeson async attoparsec base bifunctors binary blaze-builder
+         bytestring containers data-default-class deepseq
+         enclosed-exceptions exceptions hashable mersenne-random-pure64
+         monad-control network protocol-buffers pureMD5 random resource-pool
+         riak-protobuf semigroups stm text time transformers
+         transformers-base unordered-containers vector
+       ];
+       testHaskellDepends = [
+         aeson base bytestring containers data-default-class HUnit mtl
+         process QuickCheck riak-protobuf semigroups tasty tasty-hunit
+         tasty-quickcheck template-haskell text yaml
+       ];
+       benchmarkHaskellDepends = [ base bytestring criterion semigroups ];
+       homepage = "http://github.com/riak-haskell-client/riak-haskell-client";
+       description = "A Haskell client for the Riak decentralized data store";
+       license = "unknown";
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "riak-protobuf" = callPackage
     ({ mkDerivation, array, base, parsec, protocol-buffers
      , protocol-buffers-descriptor
@@ -173212,17 +174398,23 @@ self: {
 
   "rio" = callPackage
     ({ mkDerivation, base, bytestring, containers, deepseq, directory
-     , exceptions, filepath, hashable, microlens, mtl, text, time
-     , typed-process, unix, unliftio, unordered-containers, vector
+     , exceptions, filepath, hashable, hspec, microlens, mtl, primitive
+     , text, time, typed-process, unix, unliftio, unordered-containers
+     , vector
      }:
      mkDerivation {
        pname = "rio";
-       version = "0.0.1.0";
-       sha256 = "006avzlv6ghwang3dhllxj7absa32sxw2qss2wdf3hxqbij6fy0b";
+       version = "0.0.2.0";
+       sha256 = "0iyfbqrgj0kcs72ibd5wm4gr51agvmqr5jg0vhay5srg86wc248l";
        libraryHaskellDepends = [
          base bytestring containers deepseq directory exceptions filepath
-         hashable microlens mtl text time typed-process unix unliftio
-         unordered-containers vector
+         hashable microlens mtl primitive text time typed-process unix
+         unliftio unordered-containers vector
+       ];
+       testHaskellDepends = [
+         base bytestring containers deepseq directory exceptions filepath
+         hashable hspec microlens mtl primitive text time typed-process unix
+         unliftio unordered-containers vector
        ];
        homepage = "https://github.com/commercialhaskell/rio#readme";
        description = "A standard library for Haskell";
@@ -173819,8 +175011,8 @@ self: {
      }:
      mkDerivation {
        pname = "rollbar";
-       version = "1.1.0";
-       sha256 = "0cad0920zs938la1p35a3pabi9il1yavnpswpvifb3qhhq8j81md";
+       version = "1.1.1";
+       sha256 = "0fwkmp55qddajbbc9dkd3y0z8x14ybvyad8pb5d7i0snxksksjrg";
        libraryHaskellDepends = [
          aeson base basic-prelude http-conduit lifted-base monad-control
          network resourcet text vector
@@ -173830,6 +175022,29 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "rollbar-hs" = callPackage
+    ({ mkDerivation, aeson, base, bytestring, case-insensitive
+     , containers, hostname, hspec, hspec-golden-aeson, http-client
+     , http-conduit, http-types, lens, lens-aeson, network, QuickCheck
+     , text, time, unordered-containers, uuid
+     }:
+     mkDerivation {
+       pname = "rollbar-hs";
+       version = "0.2.0.0";
+       sha256 = "0w4a0bl0vyzb094car4zh599j5g4zknlqia1ja0jpr62bblrkmw5";
+       libraryHaskellDepends = [
+         aeson base bytestring case-insensitive hostname http-client
+         http-conduit http-types network text time unordered-containers uuid
+       ];
+       testHaskellDepends = [
+         aeson base bytestring case-insensitive containers hspec
+         hspec-golden-aeson lens lens-aeson QuickCheck text
+       ];
+       homepage = "https://github.com/joneshf/rollbar-hs#readme";
+       description = "Core Rollbar data types and APIs";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "roller" = callPackage
     ({ mkDerivation, base, optparse-applicative, random
      , regex-applicative
@@ -173923,6 +175138,23 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "rope-utf16-splay" = callPackage
+    ({ mkDerivation, base, QuickCheck, tasty, tasty-hunit
+     , tasty-quickcheck, text
+     }:
+     mkDerivation {
+       pname = "rope-utf16-splay";
+       version = "0.2.0.0";
+       sha256 = "078hkv21maydvks57pz6z3qyz0r4s1c6ypdmlr4xlmakyldrdlc3";
+       libraryHaskellDepends = [ base text ];
+       testHaskellDepends = [
+         base QuickCheck tasty tasty-hunit tasty-quickcheck text
+       ];
+       homepage = "https://github.com/ollef/rope-utf16-splay";
+       description = "Ropes optimised for updating using UTF-16 code units and row/column pairs";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "rosa" = callPackage
     ({ mkDerivation, aeson, base, bytestring, directory, lens
      , namecoin-update, optparse-applicative, text, unordered-containers
@@ -174276,6 +175508,22 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "row-types" = callPackage
+    ({ mkDerivation, base, criterion, deepseq, hashable, text
+     , unordered-containers
+     }:
+     mkDerivation {
+       pname = "row-types";
+       version = "0.2.0.0";
+       sha256 = "158k4q6b1ca7d8fkznl09mdd29z7w5clxh48i3b3m1bcmhjmcfmh";
+       libraryHaskellDepends = [
+         base deepseq hashable text unordered-containers
+       ];
+       benchmarkHaskellDepends = [ base criterion deepseq ];
+       description = "Open Records and Variants";
+       license = stdenv.lib.licenses.mit;
+     }) {};
+
   "rowrecord" = callPackage
     ({ mkDerivation, base, containers, template-haskell }:
      mkDerivation {
@@ -174462,11 +175710,10 @@ self: {
   "rss-conduit" = callPackage
     ({ mkDerivation, atom-conduit, base, blaze-builder, bytestring
      , conduit, conduit-combinators, containers, data-default
-     , dublincore-xml-conduit, hlint, lens-simple, mono-traversable
-     , QuickCheck, quickcheck-instances, resourcet, safe
-     , safe-exceptions, singletons, tasty, tasty-hunit, tasty-quickcheck
-     , text, time, timerep, uri-bytestring, vinyl, xml-conduit
-     , xml-types
+     , dublincore-xml-conduit, lens-simple, mono-traversable, QuickCheck
+     , quickcheck-instances, resourcet, safe, safe-exceptions
+     , singletons, tasty, tasty-hunit, tasty-quickcheck, text, time
+     , timerep, uri-bytestring, vinyl, xml-conduit, xml-types
      }:
      mkDerivation {
        pname = "rss-conduit";
@@ -174479,11 +175726,10 @@ self: {
        ];
        testHaskellDepends = [
          atom-conduit base blaze-builder bytestring conduit
-         conduit-combinators data-default dublincore-xml-conduit hlint
-         lens-simple mono-traversable QuickCheck quickcheck-instances
-         resourcet safe-exceptions singletons tasty tasty-hunit
-         tasty-quickcheck text time uri-bytestring vinyl xml-conduit
-         xml-types
+         conduit-combinators data-default dublincore-xml-conduit lens-simple
+         mono-traversable QuickCheck quickcheck-instances resourcet
+         safe-exceptions singletons tasty tasty-hunit tasty-quickcheck text
+         time uri-bytestring vinyl xml-conduit xml-types
        ];
        description = "Streaming parser/renderer for the RSS standard";
        license = stdenv.lib.licenses.publicDomain;
@@ -174918,13 +176164,26 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base containers parsec text ];
-       executableHaskellDepends = [ base containers parsec text ];
        testHaskellDepends = [ base parsec QuickCheck text ];
        homepage = "https://github.com/aisamanra/s-cargot";
        description = "A flexible, extensible s-expression library";
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "s-cargot-letbind" = callPackage
+    ({ mkDerivation, base, HUnit, parsec, s-cargot, text }:
+     mkDerivation {
+       pname = "s-cargot-letbind";
+       version = "0.2.0.0";
+       sha256 = "17ll1vlx70wmzbigzk2klsd8vzkzhwi7amq6a27wpad6xcz8lm98";
+       libraryHaskellDepends = [ base s-cargot text ];
+       testHaskellDepends = [ base HUnit parsec s-cargot text ];
+       homepage = "https://github.com/GaloisInc/s-cargot-letbind";
+       description = "Enables let-binding and let-expansion for s-cargot defined S-expressions";
+       license = stdenv.lib.licenses.isc;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "s-expression" = callPackage
     ({ mkDerivation, base, derive-monoid, lens, semigroups }:
      mkDerivation {
@@ -175629,9 +176888,7 @@ self: {
      }) {};
 
   "samtools" = callPackage
-    ({ mkDerivation, base, bytestring, c2hs, filepath, process, seqloc
-     , vector, zlib
-     }:
+    ({ mkDerivation, base, bytestring, c2hs, seqloc, vector, zlib }:
      mkDerivation {
        pname = "samtools";
        version = "0.2.4.3";
@@ -175641,11 +176898,6 @@ self: {
        libraryHaskellDepends = [ base bytestring seqloc vector ];
        librarySystemDepends = [ zlib ];
        libraryToolDepends = [ c2hs ];
-       executableHaskellDepends = [
-         base bytestring filepath process seqloc vector
-       ];
-       executableSystemDepends = [ zlib ];
-       executableToolDepends = [ c2hs ];
        homepage = "http://www.ingolia-lab.org/samtools-tutorial.html";
        description = "Binding to the C samtools library";
        license = stdenv.lib.licenses.mit;
@@ -175689,8 +176941,7 @@ self: {
      }) {};
 
   "samtools-iteratee" = callPackage
-    ({ mkDerivation, base, bytestring, iteratee, monads-tf, samtools
-     , transformers
+    ({ mkDerivation, base, bytestring, iteratee, samtools, transformers
      }:
      mkDerivation {
        pname = "samtools-iteratee";
@@ -175701,9 +176952,6 @@ self: {
        libraryHaskellDepends = [
          base bytestring iteratee samtools transformers
        ];
-       executableHaskellDepends = [
-         base bytestring iteratee monads-tf samtools transformers
-       ];
        description = "Iteratee interface to SamTools library";
        license = stdenv.lib.licenses.mit;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -175718,6 +176966,8 @@ self: {
        pname = "sandi";
        version = "0.4.1";
        sha256 = "08y691z8m79qm4ajx5csmgv8f9x8q4r0bcfm8gb8x88lvg19493j";
+       revision = "1";
+       editedCabalFile = "1gk6vwydqdgz1s5glv4jlkaph7g19aqdf7yxbyq0m1afaj1rvjq9";
        libraryHaskellDepends = [
          base bytestring conduit exceptions stringsearch
        ];
@@ -176572,9 +177822,8 @@ self: {
          split syb tagsoup text time vector xml-conduit yaml
        ];
        executableHaskellDepends = [
-         aeson aeson-pretty attoparsec base bytestring containers directory
-         filepath process scholdoc scholdoc-types syb temporary text vector
-         yaml
+         aeson aeson-pretty attoparsec base bytestring filepath
+         scholdoc-types syb text yaml
        ];
        testHaskellDepends = [
          aeson base bytestring directory filepath process scholdoc
@@ -176588,8 +177837,8 @@ self: {
 
   "scholdoc-texmath" = callPackage
     ({ mkDerivation, base, bytestring, containers, directory, filepath
-     , mtl, network-uri, parsec, process, scholdoc-types, split, syb
-     , temporary, text, utf8-string, xml
+     , mtl, parsec, process, scholdoc-types, split, syb, temporary, text
+     , utf8-string, xml
      }:
      mkDerivation {
        pname = "scholdoc-texmath";
@@ -176600,7 +177849,6 @@ self: {
        libraryHaskellDepends = [
          base containers mtl parsec scholdoc-types syb xml
        ];
-       executableHaskellDepends = [ network-uri ];
        testHaskellDepends = [
          base bytestring directory filepath process split temporary text
          utf8-string xml
@@ -177006,8 +178254,8 @@ self: {
      }:
      mkDerivation {
        pname = "scotty-resource";
-       version = "0.2.0.0";
-       sha256 = "0210zl0ad80scjcl1dlz5z55g2rf0ybr7vj2qdl83niri8511794";
+       version = "0.2.0.1";
+       sha256 = "0y39sxvin9ljwk2jxnb18wr79d0ap9363vr2mh8xbc4llq0yjavj";
        libraryHaskellDepends = [
          base containers http-types scotty text transformers wai
        ];
@@ -177018,10 +178266,10 @@ self: {
      }) {};
 
   "scotty-rest" = callPackage
-    ({ mkDerivation, aeson, base, base-prelude, bytestring, convertible
-     , hspec, hspec-wai, http-date, http-media, http-types, mtl
-     , QuickCheck, scotty, sqlite-simple, string-conversions, text, time
-     , transformers, wai, wai-extra
+    ({ mkDerivation, base, base-prelude, bytestring, convertible, hspec
+     , hspec-wai, http-date, http-media, http-types, mtl, QuickCheck
+     , scotty, string-conversions, text, time, transformers, wai
+     , wai-extra
      }:
      mkDerivation {
        pname = "scotty-rest";
@@ -177034,9 +178282,6 @@ self: {
          http-types mtl scotty string-conversions text time transformers wai
          wai-extra
        ];
-       executableHaskellDepends = [
-         aeson base mtl scotty sqlite-simple text wai-extra
-       ];
        testHaskellDepends = [
          base bytestring hspec hspec-wai mtl QuickCheck scotty
          string-conversions text wai
@@ -178146,6 +179391,8 @@ self: {
        pname = "semigroupoids";
        version = "5.2.2";
        sha256 = "17i96y4iqj8clcs090lf6k0ij3j16nj14vsfwz0mm9nd6i4gbpp4";
+       revision = "1";
+       editedCabalFile = "16pf83y17jbjbqv6rqlz4icdzsv6b10vjci6pf92y7cpizzjw0sy";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          base base-orphans bifunctors comonad containers contravariant
@@ -178185,25 +179432,12 @@ self: {
     ({ mkDerivation, base }:
      mkDerivation {
        pname = "semigroups";
-       version = "0.18.3";
-       sha256 = "1jm9wnb5jmwdk4i9qbwfay69ydi76xi0qqi9zqp6wh3jd2c7qa9m";
-       libraryHaskellDepends = [ base ];
-       homepage = "http://github.com/ekmett/semigroups/";
-       description = "Anything that associates";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "semigroups_0_18_4" = callPackage
-    ({ mkDerivation, base }:
-     mkDerivation {
-       pname = "semigroups";
        version = "0.18.4";
        sha256 = "09sxd17h1kcjsjaf1am2nwpb4vaq8d0q718fbkxwysws691317jq";
        libraryHaskellDepends = [ base ];
        homepage = "http://github.com/ekmett/semigroups/";
        description = "Anything that associates";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "semigroups-actions" = callPackage
@@ -178220,10 +179454,7 @@ self: {
      }) {};
 
   "semiring" = callPackage
-    ({ mkDerivation, base, Boolean, containers, HUnit, monoids
-     , QuickCheck, test-framework, test-framework-hunit
-     , test-framework-quickcheck2
-     }:
+    ({ mkDerivation, base, Boolean, containers, monoids }:
      mkDerivation {
        pname = "semiring";
        version = "0.3";
@@ -178231,10 +179462,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base Boolean containers monoids ];
-       executableHaskellDepends = [
-         base Boolean containers HUnit monoids QuickCheck test-framework
-         test-framework-hunit test-framework-quickcheck2
-       ];
        homepage = "http://github.com/srush/SemiRings/tree/master";
        description = "Semirings, ring-like structures used for dynamic programming applications";
        license = stdenv.lib.licenses.bsd3;
@@ -178357,6 +179584,7 @@ self: {
        homepage = "https://github.com/marcelbuesing/sendgrid-v3";
        description = "Sendgrid v3 API library";
        license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "sensei" = callPackage
@@ -178414,27 +179642,6 @@ self: {
      }:
      mkDerivation {
        pname = "sensu-run";
-       version = "0.4.0.3";
-       sha256 = "05gl6dannlfx49f24lhspyygq8j37wmsyp8nrlcpcsqbrbd3k82g";
-       isLibrary = false;
-       isExecutable = true;
-       executableHaskellDepends = [
-         aeson base bytestring filepath http-client http-types lens network
-         optparse-applicative process temporary text time unix unix-compat
-         vector wreq
-       ];
-       homepage = "https://github.com/maoe/sensu-run#readme";
-       description = "A tool to send command execution results to Sensu";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "sensu-run_0_4_0_4" = callPackage
-    ({ mkDerivation, aeson, base, bytestring, filepath, http-client
-     , http-types, lens, network, optparse-applicative, process
-     , temporary, text, time, unix, unix-compat, vector, wreq
-     }:
-     mkDerivation {
-       pname = "sensu-run";
        version = "0.4.0.4";
        sha256 = "1pgzfa6ns67fq5cx7qizwjfb2gw6awx012iwhskx8s4wg9snbq5y";
        isLibrary = false;
@@ -178447,7 +179654,6 @@ self: {
        homepage = "https://github.com/maoe/sensu-run#readme";
        description = "A tool to send command execution results to Sensu";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "sentence-jp" = callPackage
@@ -178651,7 +179857,7 @@ self: {
          attoparsec base biocore bytestring cmdtheline conduit conduit-extra
          filepath hashable iteratee lifted-base monads-tf pretty QuickCheck
          random resourcet seqloc transformers transformers-base
-         unordered-containers vector
+         unordered-containers
        ];
        testHaskellDepends = [
          attoparsec base biocore bytestring conduit conduit-extra directory
@@ -178688,7 +179894,6 @@ self: {
        libraryHaskellDepends = [
          base bytestring containers ghc transformers
        ];
-       executableHaskellDepends = [ base bytestring containers ];
        homepage = "https://github.com/lukemaurer/sequent-core";
        description = "Alternative Core language for GHC plugins";
        license = stdenv.lib.licenses.bsd3;
@@ -178968,30 +180173,28 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "servant_0_12_1" = callPackage
+  "servant_0_13" = callPackage
     ({ mkDerivation, aeson, aeson-compat, attoparsec, base, base-compat
-     , bytestring, Cabal, cabal-doctest, case-insensitive, directory
-     , doctest, filemanip, filepath, hspec, hspec-discover
-     , http-api-data, http-media, http-types, mmorph, mtl
-     , natural-transformation, network-uri, QuickCheck
-     , quickcheck-instances, string-conversions, tagged, text, url
-     , vault
+     , bytestring, Cabal, cabal-doctest, case-insensitive, doctest
+     , hspec, hspec-discover, http-api-data, http-media, http-types
+     , mmorph, mtl, natural-transformation, network-uri, QuickCheck
+     , quickcheck-instances, singleton-bool, string-conversions, tagged
+     , text, vault
      }:
      mkDerivation {
        pname = "servant";
-       version = "0.12.1";
-       sha256 = "1aknvflz1zlvnmg9ik8zbnbckcy3ai89h7an2rbfm7ygqhmnh0rh";
+       version = "0.13";
+       sha256 = "0fmwcrkjlq1rnlbzdn918z54pqbwrjpgwy2isxmfykb31m2pn230";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          aeson attoparsec base base-compat bytestring case-insensitive
          http-api-data http-media http-types mmorph mtl
-         natural-transformation network-uri string-conversions tagged text
-         vault
+         natural-transformation network-uri singleton-bool
+         string-conversions tagged text vault
        ];
        testHaskellDepends = [
-         aeson aeson-compat attoparsec base base-compat bytestring directory
-         doctest filemanip filepath hspec QuickCheck quickcheck-instances
-         string-conversions text url
+         aeson aeson-compat attoparsec base base-compat bytestring doctest
+         hspec QuickCheck quickcheck-instances string-conversions text
        ];
        testToolDepends = [ hspec-discover ];
        homepage = "http://haskell-servant.readthedocs.org/";
@@ -179271,8 +180474,8 @@ self: {
      }:
      mkDerivation {
        pname = "servant-auth-token";
-       version = "0.5.1.0";
-       sha256 = "113pjs52nvi94bfx1ys4lanyvzkrlmb1p2y8sxhhb4bal917xki1";
+       version = "0.5.3.0";
+       sha256 = "04zg9a2brpca39gx0hk1s2mnccw8d5n3gxd082w31f3axji6rm3a";
        libraryHaskellDepends = [
          aeson-injector base bytestring containers http-api-data mtl
          pwstore-fast servant servant-auth-token-api servant-server text
@@ -179293,8 +180496,8 @@ self: {
      }:
      mkDerivation {
        pname = "servant-auth-token-acid";
-       version = "0.5.1.0";
-       sha256 = "1kxmgdj7bz2bbs6n9kfp28y9a9cvc2xk8345jnd4ks0iw43xjwr3";
+       version = "0.5.3.0";
+       sha256 = "1fwzsx13lvqaaxh8cfs7zi8l2a0c7kgz8gnnwgssrasnk27jsc20";
        libraryHaskellDepends = [
          acid-state aeson-injector base bytestring containers ghc-prim
          monad-control mtl safe safecopy servant-auth-token
@@ -179313,8 +180516,8 @@ self: {
      }:
      mkDerivation {
        pname = "servant-auth-token-api";
-       version = "0.5.1.0";
-       sha256 = "0kn25ldc774zx8r5hnrd7ibdm4g3769f99g8vl99x0miplpz0v0a";
+       version = "0.5.2.0";
+       sha256 = "1cb04lcqlb0iw729l97dm3xxxhwzinlsf4ipgda2dix8j29v7h5b";
        libraryHaskellDepends = [
          aeson aeson-injector base lens raw-strings-qq servant servant-docs
          servant-swagger swagger2 text
@@ -179334,8 +180537,8 @@ self: {
      }:
      mkDerivation {
        pname = "servant-auth-token-leveldb";
-       version = "0.5.1.0";
-       sha256 = "0bkprvi9zwc599ynkabjsk1m9wpbvfpmhzjx6rqj92m1nki62264";
+       version = "0.5.3.0";
+       sha256 = "0jj7px9w67d2kmcvap02ccmw6y4x9fz1mmwndhb4rjxyr1kkwkja";
        libraryHaskellDepends = [
          aeson-injector base bytestring concurrent-extra containers
          exceptions lens leveldb-haskell monad-control mtl resourcet safe
@@ -179357,8 +180560,8 @@ self: {
      }:
      mkDerivation {
        pname = "servant-auth-token-persistent";
-       version = "0.6.1.0";
-       sha256 = "1ni74vk121ncfkdjksf15g6686c2acbg22dn1srzwyngx5iwjcnc";
+       version = "0.6.3.0";
+       sha256 = "1rxcmccfj0rirjngqm3p5azrwlrcf8bfr3fm7m046b6w031cfh9y";
        libraryHaskellDepends = [
          aeson-injector base bytestring containers monad-control mtl
          persistent persistent-template servant-auth-token
@@ -179380,8 +180583,8 @@ self: {
      }:
      mkDerivation {
        pname = "servant-auth-token-rocksdb";
-       version = "0.5.1.0";
-       sha256 = "1xbnqv3b64r1xnzra2pdysjg5r9kxwxaya5rfrcgl8fz1b4n4hbb";
+       version = "0.5.3.0";
+       sha256 = "01nx1aj15kjg9g2k5vl0b0zrvih951sm06qybl28mm97kgcdiam1";
        libraryHaskellDepends = [
          aeson-injector base bytestring concurrent-extra containers
          exceptions lens monad-control mtl resourcet rocksdb-haskell safe
@@ -179409,6 +180612,22 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "servant-blaze_0_8" = callPackage
+    ({ mkDerivation, base, blaze-html, http-media, servant
+     , servant-server, wai, warp
+     }:
+     mkDerivation {
+       pname = "servant-blaze";
+       version = "0.8";
+       sha256 = "155f20pizgkhn0hczwpxwxw1i99h0l6kfwwhs2r6bmr305aqisj6";
+       libraryHaskellDepends = [ base blaze-html http-media servant ];
+       testHaskellDepends = [ base blaze-html servant-server wai warp ];
+       homepage = "http://haskell-servant.readthedocs.org/";
+       description = "Blaze-html support for servant";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "servant-cassava" = callPackage
     ({ mkDerivation, base, base-compat, bytestring, cassava, http-media
      , servant, servant-server, vector, wai, warp
@@ -179417,6 +180636,8 @@ self: {
        pname = "servant-cassava";
        version = "0.10";
        sha256 = "03jnyghwa5kjbl5j55njmp7as92flw91zs9cgdvb4jrsdy85sb4v";
+       revision = "1";
+       editedCabalFile = "165q0rvbk09z4k5zwhpx6380gakqbbz2xwvw40ahpjf46p0k9159";
        libraryHaskellDepends = [
          base base-compat bytestring cassava http-media servant vector
        ];
@@ -179431,10 +180652,9 @@ self: {
 
   "servant-checked-exceptions" = callPackage
     ({ mkDerivation, aeson, base, bytestring, deepseq, doctest, Glob
-     , hspec-wai, http-api-data, http-client, http-media
-     , natural-transformation, optparse-applicative, profunctors
-     , servant, servant-client, servant-docs, servant-server, tagged
-     , tasty, tasty-hspec, tasty-hunit, text, wai, warp
+     , hspec-wai, http-media, profunctors, servant, servant-client
+     , servant-docs, servant-server, tagged, tasty, tasty-hspec
+     , tasty-hunit, text, wai
      }:
      mkDerivation {
        pname = "servant-checked-exceptions";
@@ -179448,11 +180668,6 @@ self: {
          aeson base bytestring deepseq http-media profunctors servant
          servant-client servant-docs servant-server tagged text
        ];
-       executableHaskellDepends = [
-         aeson base http-api-data http-client natural-transformation
-         optparse-applicative servant servant-client servant-docs
-         servant-server text wai warp
-       ];
        testHaskellDepends = [
          base bytestring doctest Glob hspec-wai servant servant-server tasty
          tasty-hspec tasty-hunit wai
@@ -179462,6 +180677,32 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "servant-checked-exceptions_1_0_0_0" = callPackage
+    ({ mkDerivation, aeson, base, bytestring, deepseq, doctest, Glob
+     , hspec-wai, http-media, http-types, profunctors, servant
+     , servant-client, servant-docs, servant-server, tagged, tasty
+     , tasty-hspec, tasty-hunit, text, wai
+     }:
+     mkDerivation {
+       pname = "servant-checked-exceptions";
+       version = "1.0.0.0";
+       sha256 = "1kdjhjgk9m6giygvpd2b79qs08phjy72q2bh07f7wxkiwjbkq1k6";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         aeson base bytestring deepseq http-media http-types profunctors
+         servant servant-client servant-docs servant-server tagged text wai
+       ];
+       testHaskellDepends = [
+         base bytestring doctest Glob hspec-wai http-types servant
+         servant-server tasty tasty-hspec tasty-hunit wai
+       ];
+       homepage = "https://github.com/cdepillabout/servant-checked-exceptions";
+       description = "Checked exceptions for Servant APIs";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "servant-client" = callPackage
     ({ mkDerivation, aeson, attoparsec, base, base-compat
      , base64-bytestring, bytestring, deepseq, exceptions, generics-sop
@@ -179495,25 +180736,23 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "servant-client_0_12_0_1" = callPackage
+  "servant-client_0_13" = callPackage
     ({ mkDerivation, aeson, attoparsec, base, base-compat, bytestring
      , containers, deepseq, exceptions, generics-sop, hspec
      , hspec-discover, http-api-data, http-client, http-client-tls
      , http-media, http-types, HUnit, monad-control, mtl, network
      , QuickCheck, semigroupoids, servant, servant-client-core
-     , servant-server, text, transformers, transformers-base
+     , servant-server, stm, text, time, transformers, transformers-base
      , transformers-compat, wai, warp
      }:
      mkDerivation {
        pname = "servant-client";
-       version = "0.12.0.1";
-       sha256 = "12apsxsxqxc9xxcpn6l4y69x3q22407gni3ixxa7c0afcr5jnani";
-       revision = "1";
-       editedCabalFile = "1gwzjxlml8fyhn0acs6pyy1sp34dv2zxsm7pcp8kxck6h1n9x9yq";
+       version = "0.13";
+       sha256 = "0bfrc3j2b6mbsvbv66l7mh3klkrrfdjvaq5s834jiivaavc6zf93";
        libraryHaskellDepends = [
          aeson attoparsec base base-compat bytestring containers exceptions
          http-client http-client-tls http-media http-types monad-control mtl
-         semigroupoids servant-client-core text transformers
+         semigroupoids servant-client-core stm text time transformers
          transformers-base transformers-compat
        ];
        testHaskellDepends = [
@@ -179537,10 +180776,8 @@ self: {
      }:
      mkDerivation {
        pname = "servant-client-core";
-       version = "0.12";
-       sha256 = "0wb36sgirhyfqa32zjs6gz3fwzcim6qvhb6w6a3anpi2nlfaq355";
-       revision = "1";
-       editedCabalFile = "0sfj0sj66f4wi2r4g9hr6p0010jc8l2h05mi23r0217ncwh8y3xm";
+       version = "0.13";
+       sha256 = "1n7s47cqvahzfyyb4cwnq72a0qyrk8ybx4yj3g4lw9va2zlj78vp";
        libraryHaskellDepends = [
          base base-compat base64-bytestring bytestring containers exceptions
          generics-sop http-api-data http-media http-types mtl network-uri
@@ -179603,10 +180840,6 @@ self: {
          base bytestring containers postgresql-query postgresql-simple
          servant servant-db text
        ];
-       executableHaskellDepends = [
-         base bytestring monad-logger postgresql-query servant-db time
-         transformers-base
-       ];
        testHaskellDepends = [
          base bytestring derive hspec HUnit monad-logger
          optparse-applicative postgresql-query QuickCheck
@@ -179646,7 +180879,7 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "servant-docs_0_11_1" = callPackage
+  "servant-docs_0_11_2" = callPackage
     ({ mkDerivation, aeson, aeson-pretty, base, base-compat, bytestring
      , case-insensitive, control-monad-omega, hashable, hspec
      , hspec-discover, http-media, http-types, lens, servant
@@ -179654,8 +180887,8 @@ self: {
      }:
      mkDerivation {
        pname = "servant-docs";
-       version = "0.11.1";
-       sha256 = "1i2680jzgrlcajxmakcg1hvddkbx6fbz4vvrbz0ca660hil2vlb2";
+       version = "0.11.2";
+       sha256 = "1x6lvpvlm1lh51y2pmldrjdjjrs5qnq44m2abczr75fjjy6hla3b";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -179727,9 +180960,8 @@ self: {
      }) {};
 
   "servant-elm" = callPackage
-    ({ mkDerivation, aeson, base, Diff, directory, elm-export, hspec
-     , HUnit, interpolate, lens, mockery, process, servant
-     , servant-foreign, text, wl-pprint-text
+    ({ mkDerivation, aeson, base, Diff, elm-export, hspec, HUnit, lens
+     , servant, servant-foreign, text, wl-pprint-text
      }:
      mkDerivation {
        pname = "servant-elm";
@@ -179740,10 +180972,8 @@ self: {
        libraryHaskellDepends = [
          base elm-export lens servant servant-foreign text wl-pprint-text
        ];
-       executableHaskellDepends = [ base elm-export servant text ];
        testHaskellDepends = [
-         aeson base Diff directory elm-export hspec HUnit interpolate
-         mockery process servant text
+         aeson base Diff elm-export hspec HUnit servant text
        ];
        homepage = "http://github.com/mattjbray/servant-elm#readme";
        description = "Automatically derive Elm functions to query servant webservices";
@@ -179807,15 +181037,17 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "servant-foreign_0_10_2" = callPackage
-    ({ mkDerivation, base, hspec, hspec-discover, http-types, lens
-     , servant, text
+  "servant-foreign_0_11" = callPackage
+    ({ mkDerivation, base, base-compat, hspec, hspec-discover
+     , http-types, lens, servant, text
      }:
      mkDerivation {
        pname = "servant-foreign";
-       version = "0.10.2";
-       sha256 = "16r42df628jsw9khv5kjwb702ajwmxg4kya19acm10660c0gxygs";
-       libraryHaskellDepends = [ base http-types lens servant text ];
+       version = "0.11";
+       sha256 = "1n8cjlk16m24wdxicyp0js1lsshqf27bk5a6qykc2f8kiriw5jcf";
+       libraryHaskellDepends = [
+         base base-compat http-types lens servant text
+       ];
        testHaskellDepends = [ base hspec servant ];
        testToolDepends = [ hspec-discover ];
        description = "Helpers for generating clients for servant APIs in any programming language";
@@ -179935,9 +181167,8 @@ self: {
      }) {};
 
   "servant-jquery" = callPackage
-    ({ mkDerivation, aeson, base, charset, filepath, hspec
-     , hspec-expectations, language-ecmascript, lens, servant
-     , servant-server, stm, text, transformers, warp
+    ({ mkDerivation, base, charset, hspec, hspec-expectations
+     , language-ecmascript, lens, servant, text
      }:
      mkDerivation {
        pname = "servant-jquery";
@@ -179946,9 +181177,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base charset lens servant text ];
-       executableHaskellDepends = [
-         aeson base filepath servant servant-server stm transformers warp
-       ];
        testHaskellDepends = [
          base hspec hspec-expectations language-ecmascript lens servant
        ];
@@ -179959,10 +181187,9 @@ self: {
      }) {};
 
   "servant-js" = callPackage
-    ({ mkDerivation, aeson, base, base-compat, charset, filepath, hspec
-     , hspec-discover, hspec-expectations, language-ecmascript, lens
-     , QuickCheck, servant, servant-foreign, servant-server, stm, text
-     , transformers, warp
+    ({ mkDerivation, base, base-compat, charset, hspec, hspec-discover
+     , hspec-expectations, language-ecmascript, lens, QuickCheck
+     , servant, servant-foreign, text
      }:
      mkDerivation {
        pname = "servant-js";
@@ -179973,9 +181200,29 @@ self: {
        libraryHaskellDepends = [
          base base-compat charset lens servant servant-foreign text
        ];
-       executableHaskellDepends = [
-         aeson base filepath lens servant servant-server stm transformers
-         warp
+       testHaskellDepends = [
+         base base-compat hspec hspec-expectations language-ecmascript lens
+         QuickCheck servant text
+       ];
+       testToolDepends = [ hspec-discover ];
+       homepage = "http://haskell-servant.readthedocs.org/";
+       description = "Automatically derive javascript functions to query servant webservices";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
+  "servant-js_0_9_3_2" = callPackage
+    ({ mkDerivation, base, base-compat, charset, hspec, hspec-discover
+     , hspec-expectations, language-ecmascript, lens, QuickCheck
+     , servant, servant-foreign, text
+     }:
+     mkDerivation {
+       pname = "servant-js";
+       version = "0.9.3.2";
+       sha256 = "1p37520x85rg7rnhazby0x6qas2sh5d79gygmaa5f7jalhkyrq02";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         base base-compat charset lens servant servant-foreign text
        ];
        testHaskellDepends = [
          base base-compat hspec hspec-expectations language-ecmascript lens
@@ -179985,6 +181232,7 @@ self: {
        homepage = "http://haskell-servant.readthedocs.org/";
        description = "Automatically derive javascript functions to query servant webservices";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "servant-kotlin" = callPackage
@@ -180027,6 +181275,22 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "servant-lucid_0_8" = callPackage
+    ({ mkDerivation, base, http-media, lucid, servant, servant-server
+     , wai, warp
+     }:
+     mkDerivation {
+       pname = "servant-lucid";
+       version = "0.8";
+       sha256 = "0vkhh6n51672l3cvd64xdddnzr351j9hd80j7raqkq6k1wrygfi5";
+       libraryHaskellDepends = [ base http-media lucid servant ];
+       testHaskellDepends = [ base lucid servant-server wai warp ];
+       homepage = "http://haskell-servant.readthedocs.org/";
+       description = "Servant support for lucid";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "servant-match" = callPackage
     ({ mkDerivation, base, bytestring, hspec, http-types, network-uri
      , servant, text, utf8-string
@@ -180097,6 +181361,36 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "servant-mock_0_8_4" = callPackage
+    ({ mkDerivation, aeson, base, base-compat, bytestring
+     , bytestring-conversion, hspec, hspec-discover, hspec-wai
+     , http-types, QuickCheck, servant, servant-server, transformers
+     , wai, warp
+     }:
+     mkDerivation {
+       pname = "servant-mock";
+       version = "0.8.4";
+       sha256 = "1705fw63lrzw79w1ypcdlf35d8qxx247q8isiqh28wzmc4j3kmnr";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         base base-compat bytestring http-types QuickCheck servant
+         servant-server transformers wai
+       ];
+       executableHaskellDepends = [
+         aeson base QuickCheck servant-server warp
+       ];
+       testHaskellDepends = [
+         aeson base bytestring-conversion hspec hspec-wai QuickCheck servant
+         servant-server wai
+       ];
+       testToolDepends = [ hspec-discover ];
+       homepage = "http://haskell-servant.readthedocs.org/";
+       description = "Derive a mock server for free from your servant API types";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "servant-multipart" = callPackage
     ({ mkDerivation, base, bytestring, directory, http-client
      , http-media, lens, network, resourcet, servant, servant-docs
@@ -180104,8 +181398,8 @@ self: {
      }:
      mkDerivation {
        pname = "servant-multipart";
-       version = "0.11";
-       sha256 = "1m3mzqsg09mcdkr88rba2fq4j19kqrgmrq9nd70dwivfqbh5nvpj";
+       version = "0.11.1";
+       sha256 = "06wnmazi4f2lgk2ziyh0wjnjl5gs88rsb0f6bpphxkv7wy3agv4q";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -180156,6 +181450,22 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "servant-pagination" = callPackage
+    ({ mkDerivation, base, safe, servant, servant-server, text }:
+     mkDerivation {
+       pname = "servant-pagination";
+       version = "1.0.0";
+       sha256 = "1cxd9sqryk619ss7x55w8xh4y3dkxl0gcdr3kawryzcm64qlgyja";
+       revision = "1";
+       editedCabalFile = "0y9mg8jaag07f89krsk2n3y635rjgmcym1kx130s7hb3h3ly7713";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [ base safe servant servant-server text ];
+       homepage = "https://github.com/chordify/haskell-servant-pagination";
+       description = "Type-safe pagination for Servant APIs";
+       license = stdenv.lib.licenses.lgpl3;
+     }) {};
+
   "servant-pandoc" = callPackage
     ({ mkDerivation, base, bytestring, case-insensitive, http-media
      , lens, pandoc-types, servant-docs, string-conversions, text
@@ -180280,8 +181590,8 @@ self: {
      }:
      mkDerivation {
        pname = "servant-pushbullet-client";
-       version = "0.4.0.0";
-       sha256 = "0v2mkriwh7lara66w02kkzwlnr5y8ahb6djpsnhvch1asa5klsnk";
+       version = "0.5.0.0";
+       sha256 = "1pdqb2kff033zga35n9ycgnw3zb42b5hpap3f4fjkxfbxz5cq3zz";
        libraryHaskellDepends = [
          aeson base http-api-data http-client http-client-tls microlens
          microlens-th pushbullet-types scientific servant servant-client
@@ -180293,10 +181603,9 @@ self: {
      }) {};
 
   "servant-py" = callPackage
-    ({ mkDerivation, aeson, base, base-compat, blaze-html, bytestring
-     , charset, filepath, hspec, hspec-expectations, lens, QuickCheck
-     , servant, servant-blaze, servant-foreign, servant-server, stm
-     , text, wai, warp
+    ({ mkDerivation, aeson, base, base-compat, bytestring, charset
+     , hspec, hspec-expectations, lens, QuickCheck, servant
+     , servant-foreign, text
      }:
      mkDerivation {
        pname = "servant-py";
@@ -180307,10 +181616,6 @@ self: {
        libraryHaskellDepends = [
          aeson base bytestring charset lens servant servant-foreign text
        ];
-       executableHaskellDepends = [
-         aeson base blaze-html bytestring filepath servant servant-blaze
-         servant-foreign servant-server stm text wai warp
-       ];
        testHaskellDepends = [
          aeson base base-compat bytestring hspec hspec-expectations lens
          QuickCheck servant servant-foreign text
@@ -180331,8 +181636,8 @@ self: {
      }:
      mkDerivation {
        pname = "servant-quickcheck";
-       version = "0.0.5.0";
-       sha256 = "1867dcdm87gzq9gzz02rc9h6vcwpi24lxcxyij0aazgvfgsya6m6";
+       version = "0.0.6.0";
+       sha256 = "1llhxqnbrydikrxdd10cfk4shgbfpxvlsym0lvvvbva4vci1k8wj";
        libraryHaskellDepends = [
          aeson base base-compat bytestring case-insensitive clock
          data-default-class hspec http-client http-media http-types mtl
@@ -180342,19 +181647,19 @@ self: {
        testHaskellDepends = [
          aeson base base-compat blaze-html bytestring hspec hspec-core
          http-client QuickCheck quickcheck-io servant servant-blaze
-         servant-client servant-server transformers warp
+         servant-client servant-server text transformers warp
        ];
        testToolDepends = [ hspec-discover ];
        description = "QuickCheck entire APIs";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "servant-rawm" = callPackage
     ({ mkDerivation, base, bytestring, doctest, filepath, Glob
      , hspec-wai, http-client, http-media, http-types, lens, resourcet
      , servant, servant-client, servant-docs, servant-server, tasty
-     , tasty-hspec, tasty-hunit, text, transformers, wai, wai-app-static
-     , warp
+     , tasty-hspec, tasty-hunit, transformers, wai, wai-app-static, warp
      }:
      mkDerivation {
        pname = "servant-rawm";
@@ -180367,11 +181672,6 @@ self: {
          resourcet servant-client servant-docs servant-server wai
          wai-app-static
        ];
-       executableHaskellDepends = [
-         base bytestring http-client http-media http-types servant
-         servant-client servant-docs servant-server text transformers wai
-         warp
-       ];
        testHaskellDepends = [
          base bytestring doctest Glob hspec-wai http-client http-media
          http-types servant servant-client servant-server tasty tasty-hspec
@@ -180430,6 +181730,23 @@ self: {
        homepage = "https://github.com/joneshf/servant-ruby#readme";
        description = "Generate a Ruby client from a Servant API with Net::HTTP";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
+  "servant-ruby_0_7_0_0" = callPackage
+    ({ mkDerivation, base, casing, doctest, lens, QuickCheck
+     , servant-foreign, text
+     }:
+     mkDerivation {
+       pname = "servant-ruby";
+       version = "0.7.0.0";
+       sha256 = "0r39ixsmqslbygd38bvz61a7n0r7g54zfrcgjfn506599ybianm9";
+       libraryHaskellDepends = [ base casing lens servant-foreign text ];
+       testHaskellDepends = [ base doctest QuickCheck ];
+       homepage = "https://github.com/joneshf/servant-ruby#readme";
+       description = "Generate a Ruby client from a Servant API with Net::HTTP";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "servant-scotty" = callPackage
@@ -180491,29 +181808,27 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "servant-server_0_12" = callPackage
+  "servant-server_0_13" = callPackage
     ({ mkDerivation, aeson, attoparsec, base, base-compat
      , base64-bytestring, bytestring, Cabal, cabal-doctest, containers
-     , directory, doctest, exceptions, filemanip, filepath, hspec
-     , hspec-discover, hspec-wai, http-api-data, http-types
-     , monad-control, mtl, network, network-uri, parsec, QuickCheck
-     , resourcet, safe, servant, should-not-typecheck, split
-     , string-conversions, system-filepath, tagged, temporary, text
-     , transformers, transformers-base, transformers-compat, wai
-     , wai-app-static, wai-extra, warp, word8
+     , directory, doctest, exceptions, filepath, hspec, hspec-discover
+     , hspec-wai, http-api-data, http-media, http-types, monad-control
+     , mtl, network, network-uri, parsec, QuickCheck, resourcet, safe
+     , servant, should-not-typecheck, split, string-conversions
+     , system-filepath, tagged, temporary, text, transformers
+     , transformers-base, transformers-compat, wai, wai-app-static
+     , wai-extra, warp, word8
      }:
      mkDerivation {
        pname = "servant-server";
-       version = "0.12";
-       sha256 = "1iiwk4d945z4xkxm3hn4d9ybi04n1ig4niip7vk3xp0wzikk7wk5";
-       revision = "1";
-       editedCabalFile = "1b0vqzbaaz3bqzdh640rss5xsyl0s5q42xccfdmzmpn559w3p81r";
+       version = "0.13";
+       sha256 = "09hqihij87h031qcr4swsn82fsv8v1qklqc2hl0is8rd8bzi2cjy";
        isLibrary = true;
        isExecutable = true;
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          aeson attoparsec base base-compat base64-bytestring bytestring
-         containers exceptions filepath http-api-data http-types
+         containers exceptions filepath http-api-data http-media http-types
          monad-control mtl network network-uri resourcet safe servant split
          string-conversions system-filepath tagged text transformers
          transformers-base transformers-compat wai wai-app-static warp word8
@@ -180521,10 +181836,10 @@ self: {
        executableHaskellDepends = [ aeson base servant text wai warp ];
        testHaskellDepends = [
          aeson base base-compat base64-bytestring bytestring directory
-         doctest exceptions filemanip filepath hspec hspec-wai http-types
-         mtl network parsec QuickCheck resourcet safe servant
-         should-not-typecheck string-conversions temporary text transformers
-         transformers-compat wai wai-extra warp
+         doctest exceptions hspec hspec-wai http-types mtl network parsec
+         QuickCheck resourcet safe servant should-not-typecheck
+         string-conversions temporary text transformers transformers-compat
+         wai wai-extra warp
        ];
        testToolDepends = [ hspec-discover ];
        homepage = "http://haskell-servant.readthedocs.org/";
@@ -180600,7 +181915,7 @@ self: {
     ({ mkDerivation, base, blaze-html, bytestring, containers
      , directory, doctest, filepath, Glob, hspec-wai, http-media
      , semigroups, servant, servant-blaze, servant-server, tasty
-     , tasty-hspec, tasty-hunit, template-haskell, text, wai, warp
+     , tasty-hspec, tasty-hunit, template-haskell, text, wai
      }:
      mkDerivation {
        pname = "servant-static-th";
@@ -180613,7 +181928,6 @@ self: {
          semigroups servant servant-blaze servant-server template-haskell
          text
        ];
-       executableHaskellDepends = [ base servant-server wai warp ];
        testHaskellDepends = [
          base blaze-html bytestring directory doctest filepath Glob
          hspec-wai servant servant-blaze servant-server tasty tasty-hspec
@@ -180675,6 +181989,34 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "servant-swagger_1_1_5" = callPackage
+    ({ mkDerivation, aeson, aeson-qq, base, bytestring, Cabal
+     , cabal-doctest, directory, doctest, filepath, hspec
+     , hspec-discover, http-media, insert-ordered-containers, lens
+     , QuickCheck, servant, singleton-bool, swagger2, text, time
+     , unordered-containers
+     }:
+     mkDerivation {
+       pname = "servant-swagger";
+       version = "1.1.5";
+       sha256 = "02m51kgwa2cp72wfq6a96zncywryrnxq778jh2cqmpzjrhml8yjg";
+       setupHaskellDepends = [ base Cabal cabal-doctest ];
+       libraryHaskellDepends = [
+         aeson base bytestring hspec http-media insert-ordered-containers
+         lens QuickCheck servant singleton-bool swagger2 text
+         unordered-containers
+       ];
+       testHaskellDepends = [
+         aeson aeson-qq base directory doctest filepath hspec lens
+         QuickCheck servant swagger2 text time
+       ];
+       testToolDepends = [ hspec-discover ];
+       homepage = "https://github.com/haskell-servant/servant-swagger";
+       description = "Generate Swagger specification for your servant API";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "servant-swagger-ui" = callPackage
     ({ mkDerivation, aeson, base, base-compat, blaze-markup, bytestring
      , directory, file-embed, filepath, http-media, lens, servant
@@ -180703,6 +182045,33 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "servant-swagger-ui_0_2_5_3_9_1" = callPackage
+    ({ mkDerivation, aeson, base, base-compat, blaze-markup, bytestring
+     , directory, file-embed, filepath, http-media, lens, servant
+     , servant-blaze, servant-server, servant-swagger, swagger2
+     , template-haskell, text, transformers, transformers-compat, wai
+     , wai-app-static, warp
+     }:
+     mkDerivation {
+       pname = "servant-swagger-ui";
+       version = "0.2.5.3.9.1";
+       sha256 = "1fbznhlzh9xnnhxsazan46w5x439a31lglb8mh7j945axyh7l09m";
+       libraryHaskellDepends = [
+         base blaze-markup bytestring directory file-embed filepath
+         http-media servant servant-blaze servant-server servant-swagger
+         swagger2 template-haskell text transformers transformers-compat
+         wai-app-static
+       ];
+       testHaskellDepends = [
+         aeson base base-compat lens servant servant-server servant-swagger
+         swagger2 text transformers transformers-compat wai warp
+       ];
+       homepage = "https://github.com/phadej/servant-swagger-ui#readme";
+       description = "Servant swagger ui";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "servant-websockets" = callPackage
     ({ mkDerivation, aeson, async, base, bytestring, conduit
      , exceptions, resourcet, servant-server, text, wai, wai-websockets
@@ -180758,8 +182127,8 @@ self: {
        pname = "servant-yaml";
        version = "0.1.0.0";
        sha256 = "011jxvr2i65bf0kmdn0sxkqgfz628a0sfhzphr1rqsmh8sqdj5y9";
-       revision = "17";
-       editedCabalFile = "1525b9dm2g8r2xrisciypi0ihm3rmbs3g3f9nvg01qwa3q1sxf70";
+       revision = "18";
+       editedCabalFile = "038paj9z77rx6jc06vg5f4f9gvwaq73ggw7ppgrw6vwhsl4nd84q";
        libraryHaskellDepends = [
          base bytestring http-media servant yaml
        ];
@@ -181210,6 +182579,25 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "set-cover_0_0_9" = callPackage
+    ({ mkDerivation, base, containers, enummapset, psqueues, semigroups
+     , utility-ht
+     }:
+     mkDerivation {
+       pname = "set-cover";
+       version = "0.0.9";
+       sha256 = "1qbk5y2pg6jlclszd2nras5240r0ahapsibykkcqrxhgq0hgvsxg";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         base containers enummapset psqueues semigroups utility-ht
+       ];
+       homepage = "http://hub.darcs.net/thielema/set-cover/";
+       description = "Solve exact set cover problems like Sudoku, 8 Queens, Soma Cube, Tetris Cube";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "set-extra" = callPackage
     ({ mkDerivation, base, containers, mtl, syb }:
      mkDerivation {
@@ -181489,9 +182877,7 @@ self: {
      }) {};
 
   "sexpr" = callPackage
-    ({ mkDerivation, base, base64-string, binary, bytestring, pretty
-     , QuickCheck, random
-     }:
+    ({ mkDerivation, base, base64-string, binary, bytestring, pretty }:
      mkDerivation {
        pname = "sexpr";
        version = "0.2.1";
@@ -181501,7 +182887,6 @@ self: {
        libraryHaskellDepends = [
          base base64-string binary bytestring pretty
        ];
-       executableHaskellDepends = [ QuickCheck random ];
        description = "S-expression printer and parser";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -181778,20 +183163,56 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "shake_0_16_2" = callPackage
+    ({ mkDerivation, base, binary, bytestring, deepseq, directory
+     , extra, filepath, hashable, js-flot, js-jquery, primitive, process
+     , QuickCheck, random, time, transformers, unix
+     , unordered-containers, utf8-string
+     }:
+     mkDerivation {
+       pname = "shake";
+       version = "0.16.2";
+       sha256 = "07drp370pd794f0lbs2512dhkr3himndafyfngvxad6m4m6nri18";
+       isLibrary = true;
+       isExecutable = true;
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         base binary bytestring deepseq directory extra filepath hashable
+         js-flot js-jquery primitive process random time transformers unix
+         unordered-containers utf8-string
+       ];
+       executableHaskellDepends = [
+         base binary bytestring deepseq directory extra filepath hashable
+         js-flot js-jquery primitive process random time transformers unix
+         unordered-containers utf8-string
+       ];
+       testHaskellDepends = [
+         base binary bytestring deepseq directory extra filepath hashable
+         js-flot js-jquery primitive process QuickCheck random time
+         transformers unix unordered-containers utf8-string
+       ];
+       homepage = "http://shakebuild.com";
+       description = "Build system library, like Make, but more accurate dependencies";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "shake-ats" = callPackage
-    ({ mkDerivation, base, binary, directory, hs2ats, language-ats
-     , shake, shake-ext, text
+    ({ mkDerivation, base, binary, dependency, directory, hs2ats
+     , language-ats, lens, shake, shake-ext, text
      }:
      mkDerivation {
        pname = "shake-ats";
-       version = "1.1.0.2";
-       sha256 = "0k15mpd72mmlnshgm2df042kqwzgk49ylf5rb99sdb9sjn0yrdbm";
+       version = "1.5.0.1";
+       sha256 = "0gyaysqi2hxa782g34njpsjm6kpxixmqqd7v5pwna5bri9pwykmq";
        libraryHaskellDepends = [
-         base binary directory hs2ats language-ats shake shake-ext text
+         base binary dependency directory hs2ats language-ats lens shake
+         shake-ext text
        ];
        homepage = "https://github.com/vmchale/shake-ats#readme";
        description = "Utilities for building ATS projects with shake";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "shake-cabal-build" = callPackage
@@ -181812,16 +183233,15 @@ self: {
      }) {};
 
   "shake-ext" = callPackage
-    ({ mkDerivation, base, Cabal, composition-prelude, directory
-     , language-ats, mtl, shake, text
+    ({ mkDerivation, base, Cabal, directory, mtl, shake
+     , template-haskell, text
      }:
      mkDerivation {
        pname = "shake-ext";
-       version = "2.1.0.2";
-       sha256 = "0ii1l76ms3b2c6pgclrgpfgpjsmxw5ax9gi7g60jyby9s5cgbgmc";
+       version = "2.5.0.0";
+       sha256 = "0bsl49x7y1mif4h3yp4k8p5n39d410nm0awxdpiwvan9pnz692df";
        libraryHaskellDepends = [
-         base Cabal composition-prelude directory language-ats mtl shake
-         text
+         base Cabal directory mtl shake template-haskell text
        ];
        homepage = "https://hub.darcs.net/vmchale/shake-ext";
        description = "Helper functions for linting with shake";
@@ -181960,8 +183380,8 @@ self: {
      }:
      mkDerivation {
        pname = "shakers";
-       version = "0.0.40";
-       sha256 = "0jlihrgg0c2ksbj2dkzsp6c83m66dxdsy3993xpa018idjsm3cf9";
+       version = "0.0.41";
+       sha256 = "0djg61fv6g0xskk72a06kva70a6zvdwlsfhdnw6fsk69h0vlidrc";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -181982,8 +183402,8 @@ self: {
      }:
      mkDerivation {
        pname = "shakespeare";
-       version = "2.0.14.1";
-       sha256 = "02pahbvibll4jmbq6p5vxr2r4mmrfx3h0c8v6qbj4rlq96lc6a23";
+       version = "2.0.15";
+       sha256 = "1vk4b19zvwy4mpwaq9z3l3kfmz75gfyf7alhh0y112gspgpccm23";
        libraryHaskellDepends = [
          aeson base blaze-html blaze-markup bytestring containers directory
          exceptions ghc-prim parsec process scientific template-haskell text
@@ -182376,6 +183796,21 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "shellout" = callPackage
+    ({ mkDerivation, async, base, stm, text, typed-process }:
+     mkDerivation {
+       pname = "shellout";
+       version = "0.1.0.0";
+       sha256 = "0cinrxwr4jclx37c3h9r1swkj6l78z7fmja6242z53ai1kjqj9kp";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [ async base stm text typed-process ];
+       executableHaskellDepends = [ async base stm text typed-process ];
+       homepage = "https://github.com/loganmac/shellout#readme";
+       description = "A threaded manager for Haskell that can run and stream external process output/err/exits";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "shelltestrunner" = callPackage
     ({ mkDerivation, base, cmdargs, Diff, directory, filemanip
      , filepath, HUnit, parsec, pretty-show, process, regex-tdfa, safe
@@ -182508,6 +183943,21 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "shimmer" = callPackage
+    ({ mkDerivation, base, bytestring, containers, filepath, haskeline
+     , text, vector
+     }:
+     mkDerivation {
+       pname = "shimmer";
+       version = "0.1.1";
+       sha256 = "10n9dq9445anb2n85xasl1l8qx40p5bnm12xj47n6wbmxhd75fvh";
+       libraryHaskellDepends = [
+         base bytestring containers filepath haskeline text vector
+       ];
+       description = "The Reflective Lambda Machine";
+       license = stdenv.lib.licenses.mit;
+     }) {};
+
   "shine" = callPackage
     ({ mkDerivation, base, ghcjs-dom, ghcjs-prim, keycode, mtl, time
      , transformers
@@ -182954,6 +184404,8 @@ self: {
        pname = "sign";
        version = "0.4.3";
        sha256 = "0i3m3zylss4nxmf290wmc8ldck0pnx0m5z4y8nhxnz51adlmp1bp";
+       revision = "1";
+       editedCabalFile = "112xj46k2fzhxiqsnh2fs7fmfrhs6k4q65jxw8mkn58mwl9sr86f";
        libraryHaskellDepends = [
          base containers deepseq hashable lattices universe-base
        ];
@@ -183611,23 +185063,6 @@ self: {
      }:
      mkDerivation {
        pname = "simple-sendfile";
-       version = "0.2.26";
-       sha256 = "0z2r971bjy9wwv9rhnzh0ldd0z9zvqwyrq9yhz7m4lnf0k0wqq6z";
-       libraryHaskellDepends = [ base bytestring network unix ];
-       testHaskellDepends = [
-         base bytestring conduit conduit-extra directory hspec HUnit network
-         process resourcet unix
-       ];
-       description = "Cross platform library for the sendfile system call";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "simple-sendfile_0_2_27" = callPackage
-    ({ mkDerivation, base, bytestring, conduit, conduit-extra
-     , directory, hspec, HUnit, network, process, resourcet, unix
-     }:
-     mkDerivation {
-       pname = "simple-sendfile";
        version = "0.2.27";
        sha256 = "1bwwqzcm56m2w4ymsa054sxmpbj76h9pvb0jf8zxp8lr41cp51gn";
        libraryHaskellDepends = [ base bytestring network unix ];
@@ -183637,7 +185072,6 @@ self: {
        ];
        description = "Cross platform library for the sendfile system call";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "simple-server" = callPackage
@@ -183708,7 +185142,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base mtl parsec pretty ];
-       executableHaskellDepends = [ base mtl parsec pretty ];
        testHaskellDepends = [
          base HUnit mtl parsec pretty test-framework test-framework-hunit
        ];
@@ -183806,8 +185239,8 @@ self: {
      }:
      mkDerivation {
        pname = "simple-vec3";
-       version = "0.2";
-       sha256 = "107nw2dw3f3famp1msqzf7d8v8kpiw1xza024yf53zzbx1z9ia35";
+       version = "0.3.1";
+       sha256 = "0csmwaqb3slvh0bqlh2pcjvl5rswaq92lx5d8glzznn0chxnpns4";
        libraryHaskellDepends = [ base QuickCheck vector vector-th-unbox ];
        testHaskellDepends = [
          base QuickCheck tasty tasty-quickcheck tasty-th vector
@@ -183819,6 +185252,7 @@ self: {
        homepage = "https://github.com/dzhus/simple-vec3#readme";
        description = "Three-dimensional vectors of doubles with basic operations";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "simple-zipper" = callPackage
@@ -184107,6 +185541,19 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "singleton-bool_0_1_3" = callPackage
+    ({ mkDerivation, base }:
+     mkDerivation {
+       pname = "singleton-bool";
+       version = "0.1.3";
+       sha256 = "1i29dl0f45rk280qfrcjcfbkshb7h3y0s2ndw2d7drwlcbl4p2if";
+       libraryHaskellDepends = [ base ];
+       homepage = "https://github.com/phadej/singleton-bool#readme";
+       description = "Type level booleans";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "singleton-dict" = callPackage
     ({ mkDerivation, base, singletons }:
      mkDerivation {
@@ -184389,8 +185836,7 @@ self: {
      }) {};
 
   "sized-types" = callPackage
-    ({ mkDerivation, array, base, base-compat, containers, QuickCheck
-     , singletons
+    ({ mkDerivation, array, base, base-compat, containers, singletons
      }:
      mkDerivation {
        pname = "sized-types";
@@ -184403,8 +185849,6 @@ self: {
        libraryHaskellDepends = [
          array base base-compat containers singletons
        ];
-       executableHaskellDepends = [ base base-compat ];
-       testHaskellDepends = [ base QuickCheck ];
        homepage = "http://www.ittc.ku.edu/csdl/fpg/Tools";
        description = "Sized types in Haskell using the GHC Nat kind";
        license = stdenv.lib.licenses.bsd3;
@@ -184636,11 +186080,6 @@ self: {
          bytestring case-insensitive containers directory filepath hxt mtl
          regex-pcre-builtin safe text utf8-string
        ];
-       executableHaskellDepends = [
-         aeson base base64-bytestring binary blaze-html bytestring
-         case-insensitive containers directory filepath hxt pretty-show
-         regex-pcre-builtin safe text utf8-string
-       ];
        testHaskellDepends = [
          aeson base bytestring containers Diff directory filepath HUnit
          pretty-show QuickCheck random tasty tasty-golden tasty-hunit
@@ -184673,11 +186112,6 @@ self: {
          blaze-html bytestring case-insensitive colour containers directory
          filepath hxt mtl regex-pcre-builtin safe text utf8-string
        ];
-       executableHaskellDepends = [
-         aeson ansi-terminal base base64-bytestring binary blaze-html
-         bytestring case-insensitive colour containers directory filepath
-         hxt pretty-show regex-pcre-builtin safe text utf8-string
-       ];
        testHaskellDepends = [
          aeson base bytestring containers Diff directory filepath HUnit
          pretty-show QuickCheck random tasty tasty-golden tasty-hunit
@@ -184817,7 +186251,7 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
-  "slack-web_0_2_0_2" = callPackage
+  "slack-web_0_2_0_3" = callPackage
     ({ mkDerivation, aeson, base, containers, errors, hspec
      , http-api-data, http-client, http-client-tls, megaparsec, mtl
      , servant, servant-client, servant-client-core, text, time
@@ -184825,8 +186259,8 @@ self: {
      }:
      mkDerivation {
        pname = "slack-web";
-       version = "0.2.0.2";
-       sha256 = "18hp8s5qcl2756p6sdx98d49p6bjk44616z9mcpd2ic9gcrs60q5";
+       version = "0.2.0.3";
+       sha256 = "1zxs697fmcgwrbrkzh7qgmrxcc6l75m1p300zinzqxvxv3zvk5l6";
        libraryHaskellDepends = [
          aeson base containers errors http-api-data http-client
          http-client-tls megaparsec mtl servant servant-client
@@ -185553,6 +186987,8 @@ self: {
        pname = "snap";
        version = "1.1.0.0";
        sha256 = "166ilpc4dd4020mmqn2lrfs3j5dl4a2mvqag1sz4mx7jcndrjbc8";
+       revision = "2";
+       editedCabalFile = "05k5fgb31xvz733j3d4hqbhzbjlglv1m4f020mdnm1q7qg4a81nq";
        libraryHaskellDepends = [
          aeson attoparsec base bytestring cereal clientsession configurator
          containers directory directory-tree dlist filepath hashable heist
@@ -185701,18 +187137,14 @@ self: {
      }) {};
 
   "snap-cors" = callPackage
-    ({ mkDerivation, attoparsec, base, bytestring, case-insensitive
-     , hashable, network, network-uri, snap, text, unordered-containers
-     }:
+    ({ mkDerivation, snap-core }:
      mkDerivation {
        pname = "snap-cors";
-       version = "1.2.11";
-       sha256 = "0d5gmii970z9nr4fp911xar6b6798dmjhnxhvids420why5k3gc1";
-       libraryHaskellDepends = [
-         attoparsec base bytestring case-insensitive hashable network
-         network-uri snap text unordered-containers
-       ];
-       homepage = "http://github.com/ocharles/snap-cors";
+       version = "1.3.0";
+       sha256 = "182l2wfkjanxa5n2g5ypsvdgvigfnk5f4n0am37c26lgk3n6zi9a";
+       libraryHaskellDepends = [ snap-core ];
+       doHaddock = false;
+       homepage = "https://github.com/ocharles/snap-cors";
        description = "Add CORS headers to Snap applications";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -185740,8 +187172,8 @@ self: {
      }:
      mkDerivation {
        pname = "snap-error-collector";
-       version = "1.1.4";
-       sha256 = "0k9nddbqdd6c12vrl5pqsl02pv38bhcxk5j02sq8lx7pk05w0mam";
+       version = "1.1.5";
+       sha256 = "0xpz24f2h1rzqs9j15skz1cmk18mh472zsix620shp3qjlma3da4";
        libraryHaskellDepends = [
          async base containers lifted-base monad-loops snap stm time
          transformers
@@ -185903,13 +187335,6 @@ self: {
          io-streams-haproxy lifted-base mtl network old-locale
          openssl-streams snap-core text time unix unix-compat vector
        ];
-       executableHaskellDepends = [
-         attoparsec base blaze-builder bytestring bytestring-builder
-         case-insensitive clock containers directory HsOpenSSL io-streams
-         io-streams-haproxy lifted-base mtl network old-locale
-         openssl-streams snap-core text time transformers unix unix-compat
-         vector
-       ];
        testHaskellDepends = [
          attoparsec base base16-bytestring blaze-builder bytestring
          bytestring-builder case-insensitive clock containers deepseq
@@ -186525,10 +187950,9 @@ self: {
      }) {};
 
   "snaplet-redis" = callPackage
-    ({ mkDerivation, aeson, base, bytestring, cereal, clientsession
-     , configurator, hedis, heist, lens, monad-control, mtl, network
-     , snap, snap-core, snap-server, text, time, transformers
-     , unordered-containers, xmlhtml
+    ({ mkDerivation, base, bytestring, cereal, clientsession
+     , configurator, hedis, lens, mtl, network, snap, snap-core, text
+     , time, transformers, unordered-containers
      }:
      mkDerivation {
        pname = "snaplet-redis";
@@ -186540,10 +187964,6 @@ self: {
          base bytestring cereal clientsession configurator hedis lens mtl
          network snap snap-core text time transformers unordered-containers
        ];
-       executableHaskellDepends = [
-         aeson base bytestring hedis heist lens monad-control mtl snap
-         snap-core snap-server text time xmlhtml
-       ];
        homepage = "https://github.com/dzhus/snaplet-redis#readme";
        description = "Redis support for Snap Framework";
        license = stdenv.lib.licenses.bsd3;
@@ -187753,6 +189173,25 @@ self: {
        license = "GPL";
      }) {};
 
+  "sox_0_2_3" = callPackage
+    ({ mkDerivation, base, containers, explicit-exception
+     , extensible-exceptions, process, sample-frame, semigroups
+     , transformers, unix, utility-ht
+     }:
+     mkDerivation {
+       pname = "sox";
+       version = "0.2.3";
+       sha256 = "145dmcj9vj58wrndidarnr7bbkybvzyda88awrxw4p3iqy8s2xb0";
+       libraryHaskellDepends = [
+         base containers explicit-exception extensible-exceptions process
+         sample-frame semigroups transformers unix utility-ht
+       ];
+       homepage = "http://www.haskell.org/haskellwiki/Sox";
+       description = "Play, write, read, convert audio signals using Sox";
+       license = "GPL";
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "soxlib" = callPackage
     ({ mkDerivation, base, bytestring, containers, explicit-exception
      , extensible-exceptions, sample-frame, sox, storablevector
@@ -187908,21 +189347,21 @@ self: {
 
   "sparkle" = callPackage
     ({ mkDerivation, base, binary, bytestring, Cabal, choice
-     , distributed-closure, filepath, inline-java, jni, jvm
+     , constraints, distributed-closure, filepath, inline-java, jni, jvm
      , jvm-streaming, process, regex-tdfa, singletons, streaming, text
      , vector, zip-archive
      }:
      mkDerivation {
        pname = "sparkle";
-       version = "0.7.2.1";
-       sha256 = "1bfgj1a43aj4nwzq1471l2sb9il7sh0czc22fhmd8mhpbz6wlnsp";
+       version = "0.7.3";
+       sha256 = "1wxp0wdmcvkypnayv128f2bgcdh7ka1b6ap7w5743v1gpxzkqb8b";
        isLibrary = true;
        isExecutable = true;
        enableSeparateDataOutput = true;
        setupHaskellDepends = [ base Cabal inline-java ];
        libraryHaskellDepends = [
-         base binary bytestring choice distributed-closure inline-java jni
-         jvm jvm-streaming singletons streaming text vector
+         base binary bytestring choice constraints distributed-closure
+         inline-java jni jvm jvm-streaming singletons streaming text vector
        ];
        executableHaskellDepends = [
          base bytestring filepath process regex-tdfa text zip-archive
@@ -188021,6 +189460,30 @@ self: {
        license = stdenv.lib.licenses.gpl3;
      }) {};
 
+  "sparse-linear-algebra_0_2_9_9" = callPackage
+    ({ mkDerivation, base, containers, exceptions, hspec
+     , matrix-market-attoparsec, mtl, mwc-random, primitive, QuickCheck
+     , scientific, transformers, vector, vector-algorithms
+     }:
+     mkDerivation {
+       pname = "sparse-linear-algebra";
+       version = "0.2.9.9";
+       sha256 = "1n3cxrmj5v0l5g1x1zb017sd59whpr6kfkzw3pckl1f93yh0jhf1";
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         base containers exceptions hspec mtl primitive QuickCheck
+         transformers vector vector-algorithms
+       ];
+       testHaskellDepends = [
+         base containers exceptions hspec matrix-market-attoparsec mtl
+         mwc-random primitive QuickCheck scientific
+       ];
+       homepage = "https://github.com/ocramz/sparse-linear-algebra";
+       description = "Numerical computing in native Haskell";
+       license = stdenv.lib.licenses.gpl3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "sparsebit" = callPackage
     ({ mkDerivation, base, haskell98 }:
      mkDerivation {
@@ -188093,6 +189556,7 @@ self: {
        ];
        description = "3d math including quaternions/euler angles/dcms and utility functions";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "spawn" = callPackage
@@ -189379,7 +190843,6 @@ self: {
        isExecutable = true;
        enableSeparateDataOutput = true;
        libraryHaskellDepends = [ base iproute text ];
-       executableHaskellDepends = [ base ];
        testHaskellDepends = [
          base HUnit iproute QuickCheck test-framework test-framework-hunit
          test-framework-quickcheck2 text unix
@@ -189647,10 +191110,10 @@ self: {
      }:
      mkDerivation {
        pname = "stack";
-       version = "1.6.3";
-       sha256 = "0ylika6qf7agj07wh47xjirhg74l63lx80q0xm41yd9g5ssk9cbj";
-       revision = "3";
-       editedCabalFile = "0sqhg84iyh8rmsls5lgk0and68rxkp6m4668z42y5zzy810xgd4i";
+       version = "1.6.5";
+       sha256 = "0f5a0znxwmib03vhqkw0yiv89a82z43wlm7zwfyx30gfz6iqqp7f";
+       revision = "1";
+       editedCabalFile = "11bmzlf3gxbz2gij0l2999a296z4c12l27f7jfyfka8l1k15d6b1";
        isLibrary = true;
        isExecutable = true;
        setupHaskellDepends = [ base Cabal filepath ];
@@ -190228,8 +191691,8 @@ self: {
      }:
      mkDerivation {
        pname = "stackage2nix";
-       version = "0.5.0";
-       sha256 = "0nqn2sbzig6n3jdzzi8p8kpfmd8npawn448aw9x7zixxav10xz9x";
+       version = "0.6.1";
+       sha256 = "0wqa6lrn2l38grg4h24ihacchavsyglbvlmlsfh4s9h1300dngab";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -190659,6 +192122,26 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "static-text" = callPackage
+    ({ mkDerivation, base, bytestring, doctest, doctest-discover, tasty
+     , tasty-hunit, template-haskell, text, vector
+     }:
+     mkDerivation {
+       pname = "static-text";
+       version = "0.2";
+       sha256 = "1rilg9izmw29s33abz5prhzkfay1c482n3y7zbcxjbssvc5c2vhz";
+       libraryHaskellDepends = [
+         base bytestring template-haskell text vector
+       ];
+       testHaskellDepends = [
+         base bytestring doctest doctest-discover tasty tasty-hunit
+         template-haskell
+       ];
+       homepage = "https://github.com/dzhus/static-text#readme";
+       description = "Lists, Texts, ByteStrings and Vectors of statically known length";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "staticanalysis" = callPackage
     ({ mkDerivation, base, MissingH }:
      mkDerivation {
@@ -190857,8 +192340,7 @@ self: {
        ];
        executableHaskellDepends = [ base ];
        testHaskellDepends = [
-         base bytestring Cabal filepath hspec http-client http-client-tls
-         QuickCheck semigroups text
+         base bytestring Cabal filepath hspec QuickCheck semigroups text
        ];
        homepage = "https://github.com/debug-ito/staversion";
        description = "What version is the package X in stackage lts-Y.ZZ?";
@@ -191055,11 +192537,10 @@ self: {
 
   "stgi" = callPackage
     ({ mkDerivation, ansi-terminal, ansi-wl-pprint, base, containers
-     , deepseq, doctest, parsers, prettyprinter
-     , prettyprinter-ansi-terminal, QuickCheck, semigroups, smallcheck
-     , tasty, tasty-html, tasty-hunit, tasty-quickcheck, tasty-rerun
-     , tasty-smallcheck, template-haskell, text, th-lift, transformers
-     , trifecta
+     , deepseq, parsers, prettyprinter, prettyprinter-ansi-terminal
+     , QuickCheck, semigroups, smallcheck, tasty, tasty-html
+     , tasty-hunit, tasty-quickcheck, tasty-rerun, tasty-smallcheck
+     , template-haskell, text, th-lift, transformers, trifecta
      }:
      mkDerivation {
        pname = "stgi";
@@ -191074,9 +192555,9 @@ self: {
        ];
        executableHaskellDepends = [ ansi-terminal base semigroups text ];
        testHaskellDepends = [
-         ansi-wl-pprint base containers deepseq doctest prettyprinter
-         QuickCheck semigroups smallcheck tasty tasty-html tasty-hunit
-         tasty-quickcheck tasty-rerun tasty-smallcheck template-haskell text
+         ansi-wl-pprint base containers deepseq prettyprinter QuickCheck
+         semigroups smallcheck tasty tasty-html tasty-hunit tasty-quickcheck
+         tasty-rerun tasty-smallcheck template-haskell text
        ];
        homepage = "https://github.com/quchen/stgi#readme";
        description = "Educational implementation of the STG (Spineless Tagless G-machine)";
@@ -191115,26 +192596,12 @@ self: {
     ({ mkDerivation, array, base }:
      mkDerivation {
        pname = "stm";
-       version = "2.4.4.1";
-       sha256 = "111kpy1d6f5c0bggh6hyfm86q5p8bq1qbqf6dw2x4l4dxnar16cg";
-       revision = "1";
-       editedCabalFile = "0kzw4rw9fgmc4qyxmm1lwifdyrx5r1356150xm14vy4mp86diks9";
-       libraryHaskellDepends = [ array base ];
-       description = "Software Transactional Memory";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "stm_2_4_5_0" = callPackage
-    ({ mkDerivation, array, base }:
-     mkDerivation {
-       pname = "stm";
        version = "2.4.5.0";
        sha256 = "19sr11a0hqikhvf561b38phz6k3zg9s157a0f5ffvghk7wcdpmri";
        libraryHaskellDepends = [ array base ];
        homepage = "https://wiki.haskell.org/Software_transactional_memory";
        description = "Software Transactional Memory";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "stm-channelize" = callPackage
@@ -191203,6 +192670,33 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "stm-conduit_4_0_0" = callPackage
+    ({ mkDerivation, async, base, cereal, cereal-conduit, conduit
+     , conduit-extra, directory, doctest, exceptions, HUnit, monad-loops
+     , QuickCheck, resourcet, stm, stm-chans, test-framework
+     , test-framework-hunit, test-framework-quickcheck2, transformers
+     , unliftio
+     }:
+     mkDerivation {
+       pname = "stm-conduit";
+       version = "4.0.0";
+       sha256 = "0paapljn7nqfzrx889y0n8sszci38mdiaxkgr0bb00ph9246rr7z";
+       libraryHaskellDepends = [
+         async base cereal cereal-conduit conduit conduit-extra directory
+         exceptions monad-loops resourcet stm stm-chans transformers
+         unliftio
+       ];
+       testHaskellDepends = [
+         base conduit directory doctest HUnit QuickCheck resourcet stm
+         stm-chans test-framework test-framework-hunit
+         test-framework-quickcheck2 transformers unliftio
+       ];
+       homepage = "https://github.com/cgaebel/stm-conduit";
+       description = "Introduces conduits to channels, and promotes using conduits concurrently";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "stm-containers" = callPackage
     ({ mkDerivation, async, base, base-prelude, containers, criterion
      , focus, free, hashable, hashtables, HTF, list-t, loch-th, mtl
@@ -191573,6 +193067,23 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "storable-record_0_0_4" = callPackage
+    ({ mkDerivation, base, semigroups, transformers, utility-ht }:
+     mkDerivation {
+       pname = "storable-record";
+       version = "0.0.4";
+       sha256 = "0hjs1km0fc9ch0i1rbycxia5w3939hk4p4md73ikgg4aipqb5zyf";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         base semigroups transformers utility-ht
+       ];
+       homepage = "http://code.haskell.org/~thielema/storable-record/";
+       description = "Elegant definition of Storable instances for records";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "storable-static-array" = callPackage
     ({ mkDerivation, array, base, tagged, vector }:
      mkDerivation {
@@ -191623,6 +193134,31 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "storablevector_0_2_13" = callPackage
+    ({ mkDerivation, base, bytestring, deepseq, non-negative
+     , QuickCheck, random, sample-frame, semigroups, syb, transformers
+     , unsafe, utility-ht
+     }:
+     mkDerivation {
+       pname = "storablevector";
+       version = "0.2.13";
+       sha256 = "1zmr738vwnhnyxbikayqnaz31ilv2qlmscp6iqgl7adcfbal4dzq";
+       libraryHaskellDepends = [
+         base deepseq non-negative QuickCheck semigroups syb transformers
+         unsafe utility-ht
+       ];
+       testHaskellDepends = [
+         base bytestring QuickCheck random utility-ht
+       ];
+       benchmarkHaskellDepends = [
+         base deepseq sample-frame unsafe utility-ht
+       ];
+       homepage = "http://www.haskell.org/haskellwiki/Storable_Vector";
+       description = "Fast, packed, strict storable arrays with a list interface like ByteString";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "storablevector-carray" = callPackage
     ({ mkDerivation, base, carray, storablevector, utility-ht }:
      mkDerivation {
@@ -191636,9 +193172,7 @@ self: {
      }) {};
 
   "storablevector-streamfusion" = callPackage
-    ({ mkDerivation, base, binary, bytestring, old-time, storablevector
-     , stream-fusion, utility-ht
-     }:
+    ({ mkDerivation, base, storablevector, stream-fusion, utility-ht }:
      mkDerivation {
        pname = "storablevector-streamfusion";
        version = "0.0";
@@ -191648,9 +193182,6 @@ self: {
        libraryHaskellDepends = [
          base storablevector stream-fusion utility-ht
        ];
-       executableHaskellDepends = [
-         base binary bytestring old-time stream-fusion
-       ];
        homepage = "http://www.haskell.org/haskellwiki/Storable_Vector";
        description = "Conversion between storablevector and stream-fusion lists with fusion";
        license = stdenv.lib.licenses.bsd3;
@@ -191758,10 +193289,6 @@ self: {
          aeson aeson-pretty base bytestring hashable lens template-haskell
          text unordered-containers
        ];
-       executableHaskellDepends = [
-         aeson aeson-pretty base bytestring hashable lens template-haskell
-         text unordered-containers
-       ];
        testHaskellDepends = [
          aeson aeson-pretty base bytestring hashable hspec hspec-discover
          lens template-haskell text unordered-containers
@@ -191771,28 +193298,24 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "stratosphere_0_15_1" = callPackage
-    ({ mkDerivation, aeson, aeson-pretty, base, bytestring, hashable
-     , hspec, hspec-discover, lens, template-haskell, text
+  "stratosphere_0_15_2" = callPackage
+    ({ mkDerivation, aeson, aeson-pretty, base, bytestring, containers
+     , hashable, hspec, hspec-discover, lens, template-haskell, text
      , unordered-containers
      }:
      mkDerivation {
        pname = "stratosphere";
-       version = "0.15.1";
-       sha256 = "13221ynzcaj6hilvbcllnjf1ixv6zmsp7jnhp1ishmj42z5qarbl";
+       version = "0.15.2";
+       sha256 = "00mna9w4021a1ydxyysx0wd333hby4sx3fpl1vygmcyjfibwiqmc";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
-         aeson aeson-pretty base bytestring hashable lens template-haskell
-         text unordered-containers
-       ];
-       executableHaskellDepends = [
-         aeson aeson-pretty base bytestring hashable lens template-haskell
-         text unordered-containers
+         aeson aeson-pretty base bytestring containers hashable lens
+         template-haskell text unordered-containers
        ];
        testHaskellDepends = [
-         aeson aeson-pretty base bytestring hashable hspec hspec-discover
-         lens template-haskell text unordered-containers
+         aeson aeson-pretty base bytestring containers hashable hspec
+         hspec-discover lens template-haskell text unordered-containers
        ];
        homepage = "https://github.com/frontrowed/stratosphere#readme";
        description = "EDSL for AWS CloudFormation";
@@ -192058,31 +193581,6 @@ self: {
 
   "streaming-commons" = callPackage
     ({ mkDerivation, array, async, base, blaze-builder, bytestring
-     , criterion, deepseq, directory, hspec, network, process
-     , QuickCheck, random, stm, text, transformers, unix, zlib
-     }:
-     mkDerivation {
-       pname = "streaming-commons";
-       version = "0.1.18";
-       sha256 = "1jw3y3clh2l0kmsrkhhn6n1b8i8gnwz5cwbczj1kq00sj3xjxbr7";
-       libraryHaskellDepends = [
-         array async base blaze-builder bytestring directory network process
-         random stm text transformers unix zlib
-       ];
-       testHaskellDepends = [
-         array async base blaze-builder bytestring deepseq hspec network
-         QuickCheck text unix zlib
-       ];
-       benchmarkHaskellDepends = [
-         base blaze-builder bytestring criterion deepseq text
-       ];
-       homepage = "https://github.com/fpco/streaming-commons";
-       description = "Common lower-level functions needed by various streaming data libraries";
-       license = stdenv.lib.licenses.mit;
-     }) {};
-
-  "streaming-commons_0_1_19" = callPackage
-    ({ mkDerivation, array, async, base, blaze-builder, bytestring
      , deepseq, directory, gauge, hspec, network, process, QuickCheck
      , random, stm, text, transformers, unix, zlib
      }:
@@ -192104,7 +193602,6 @@ self: {
        homepage = "https://github.com/fpco/streaming-commons";
        description = "Common lower-level functions needed by various streaming data libraries";
        license = stdenv.lib.licenses.mit;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "streaming-concurrency" = callPackage
@@ -192134,8 +193631,8 @@ self: {
      }:
      mkDerivation {
        pname = "streaming-conduit";
-       version = "0.1.2.0";
-       sha256 = "1vzw0lfj8l4ic1fcw0iqiwygg4zrfxw9xdjbl7qpkfsjsbjqyg2q";
+       version = "0.1.2.2";
+       sha256 = "0g2x8a6gksc1na3qn1fnd9c7cckn4r54x11x4rxnmy2v04sv0h8z";
        libraryHaskellDepends = [
          base bytestring conduit streaming streaming-bytestring transformers
        ];
@@ -192291,8 +193788,8 @@ self: {
      }:
      mkDerivation {
        pname = "streaming-with";
-       version = "0.2.0.0";
-       sha256 = "02cdjmq7dxqfpqs73v7c63iwavbwb56fdd3pk4qs91vm6d0lfbrp";
+       version = "0.2.1.0";
+       sha256 = "04i4k7n37qblf9yxdj0bl1qr0arpkv2l06kx7f8aqf1xa7vvxz9i";
        libraryHaskellDepends = [
          base exceptions managed streaming-bytestring temporary transformers
        ];
@@ -192454,14 +193951,14 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "strict-base-types_0_6_0" = callPackage
+  "strict-base-types_0_6_1" = callPackage
     ({ mkDerivation, aeson, base, bifunctors, binary, deepseq, ghc-prim
      , hashable, lens, QuickCheck, strict
      }:
      mkDerivation {
        pname = "strict-base-types";
-       version = "0.6.0";
-       sha256 = "01i8v4l47xp5f4i9czlwg1kk4lvnfmxhgqlcnacirrp0pfjmrq7p";
+       version = "0.6.1";
+       sha256 = "0yihvjijag9g55ihrgqj0vwn6ksvscj3r0n2zzxz2qbxrhx6m1pq";
        libraryHaskellDepends = [
          aeson base bifunctors binary deepseq ghc-prim hashable lens
          QuickCheck strict
@@ -192627,6 +194124,19 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "string-class_0_1_7_0" = callPackage
+    ({ mkDerivation, base, bytestring, tagged, text }:
+     mkDerivation {
+       pname = "string-class";
+       version = "0.1.7.0";
+       sha256 = "1s0bj0wvwriw4516za6ar7w7zsz5mmnf1dba0ch239n27rb00nwf";
+       libraryHaskellDepends = [ base bytestring tagged text ];
+       homepage = "https://github.com/string-class/string-class";
+       description = "String class library";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "string-combinators" = callPackage
     ({ mkDerivation, base }:
      mkDerivation {
@@ -192699,6 +194209,7 @@ self: {
        ];
        description = "Tools for working with isomorphisms of strings";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "string-qq" = callPackage
@@ -192779,6 +194290,24 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "string-transform_1_0_0" = callPackage
+    ({ mkDerivation, base, bytestring, tasty, tasty-hunit
+     , tasty-smallcheck, text, utf8-string
+     }:
+     mkDerivation {
+       pname = "string-transform";
+       version = "1.0.0";
+       sha256 = "0556blv06jl973pnkcab36bsa3kjzjhzs396q31qmkqnqlpday4d";
+       libraryHaskellDepends = [ base bytestring text utf8-string ];
+       testHaskellDepends = [
+         base bytestring tasty tasty-hunit tasty-smallcheck text utf8-string
+       ];
+       homepage = "https://github.com/ncaq/string-transform#readme";
+       description = "simple and easy haskell string transform wrapper";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "string-typelits" = callPackage
     ({ mkDerivation, base, template-haskell, type-combinators
      , type-combinators-quote
@@ -192819,6 +194348,19 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "stringbuilder_0_5_1" = callPackage
+    ({ mkDerivation, base, hspec, QuickCheck }:
+     mkDerivation {
+       pname = "stringbuilder";
+       version = "0.5.1";
+       sha256 = "1fh3csx1wcssn8xyvl4ip4aprh9l4qyz2kk8mgjvqvc0vb2bsy6q";
+       libraryHaskellDepends = [ base ];
+       testHaskellDepends = [ base hspec QuickCheck ];
+       description = "A writer monad for multi-line string literals";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "stringlike" = callPackage
     ({ mkDerivation, base, bytestring, QuickCheck, quickcheck-instances
      , test-framework, test-framework-quickcheck2, text
@@ -193248,9 +194790,9 @@ self: {
     ({ mkDerivation, array, base, bytestring, containers, contravariant
      , criterion, deepseq, directory, doctest, filepath, free, ghc
      , ghc-prim, hashable, hlint, hybrid-vectors, lens, monad-st
-     , MonadRandom, mwc-random, parallel, primitive, QuickCheck
-     , semigroups, tasty, tasty-quickcheck, tasty-th, transformers
-     , unordered-containers, vector, vector-algorithms
+     , MonadRandom, parallel, primitive, QuickCheck, semigroups, tasty
+     , tasty-quickcheck, tasty-th, transformers, unordered-containers
+     , vector, vector-algorithms
      }:
      mkDerivation {
        pname = "structures";
@@ -193267,7 +194809,7 @@ self: {
          unordered-containers
        ];
        benchmarkHaskellDepends = [
-         array base containers criterion deepseq MonadRandom mwc-random
+         array base containers criterion deepseq MonadRandom
          unordered-containers vector
        ];
        homepage = "http://github.com/ekmett/structures";
@@ -193367,6 +194909,31 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "stylish-cabal" = callPackage
+    ({ mkDerivation, ansi-wl-pprint, base, Cabal, containers, deepseq
+     , hlint, hspec, hspec-core, hspec-expectations-pretty-diff
+     , optparse-applicative, split
+     }:
+     mkDerivation {
+       pname = "stylish-cabal";
+       version = "0.1.0.0";
+       sha256 = "131qvb6cdfmxzxvz3mxxnapc5826ybxs62zz439cjz29n1r6p0bd";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         ansi-wl-pprint base Cabal deepseq split
+       ];
+       executableHaskellDepends = [
+         ansi-wl-pprint base optparse-applicative
+       ];
+       testHaskellDepends = [
+         ansi-wl-pprint base Cabal containers hlint hspec hspec-core
+         hspec-expectations-pretty-diff
+       ];
+       description = "Format Cabal files";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "stylish-haskell" = callPackage
     ({ mkDerivation, aeson, base, bytestring, containers, directory
      , filepath, haskell-src-exts, HUnit, mtl, optparse-applicative
@@ -194007,6 +195574,33 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "superevent" = callPackage
+    ({ mkDerivation, aeson, async, base, bytestring, conduit
+     , containers, contravariant, hashable, hasql, hasql-migration
+     , hasql-pool, hasql-transaction, hspec, mtl, QuickCheck, random
+     , stm, string-qq, temporary, text, time, timespan, transformers
+     , unordered-containers, uuid, vector
+     }:
+     mkDerivation {
+       pname = "superevent";
+       version = "0.1.0.1";
+       sha256 = "0bda6fpljydp9i3sdyb8n0sy0dbfnryz83hpmnz59jarhhzw6nxd";
+       libraryHaskellDepends = [
+         aeson async base bytestring conduit containers contravariant
+         hashable hasql hasql-migration hasql-pool hasql-transaction mtl
+         random stm string-qq text time timespan transformers
+         unordered-containers uuid vector
+       ];
+       testHaskellDepends = [
+         aeson async base conduit hspec mtl QuickCheck stm temporary text
+         transformers uuid vector
+       ];
+       homepage = "https://github.com/agrafix/superevent#readme";
+       description = "A simple opinionated event store implementation";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "supermonad" = callPackage
     ({ mkDerivation, base, containers, fgl, ghc, mtl, QuickCheck
      , transformers
@@ -194303,34 +195897,6 @@ self: {
      }:
      mkDerivation {
        pname = "swagger-petstore";
-       version = "0.0.1.7";
-       sha256 = "07p2hd35wg5g1r3lmhffvjch5vy6idmhdv21k1g8v3131apgjpxy";
-       libraryHaskellDepends = [
-         aeson base base64-bytestring bytestring case-insensitive containers
-         deepseq exceptions http-api-data http-client http-client-tls
-         http-media http-types iso8601-time katip microlens mtl network
-         random safe-exceptions text time transformers unordered-containers
-         vector
-       ];
-       testHaskellDepends = [
-         aeson base bytestring containers hspec iso8601-time mtl QuickCheck
-         semigroups text time transformers unordered-containers vector
-       ];
-       homepage = "https://github.com/swagger-api/swagger-codegen#readme";
-       description = "Auto-generated swagger-petstore API Client";
-       license = stdenv.lib.licenses.mit;
-     }) {};
-
-  "swagger-petstore_0_0_1_8" = callPackage
-    ({ mkDerivation, aeson, base, base64-bytestring, bytestring
-     , case-insensitive, containers, deepseq, exceptions, hspec
-     , http-api-data, http-client, http-client-tls, http-media
-     , http-types, iso8601-time, katip, microlens, mtl, network
-     , QuickCheck, random, safe-exceptions, semigroups, text, time
-     , transformers, unordered-containers, vector
-     }:
-     mkDerivation {
-       pname = "swagger-petstore";
        version = "0.0.1.8";
        sha256 = "1rslv21lg7jfc6vb8yyb6kkg3cma2300h4hld3m8zwfxgzcq79h7";
        libraryHaskellDepends = [
@@ -194347,7 +195913,6 @@ self: {
        homepage = "https://github.com/swagger-api/swagger-codegen#readme";
        description = "Auto-generated swagger-petstore API Client";
        license = stdenv.lib.licenses.mit;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "swagger-test" = callPackage
@@ -194392,6 +195957,8 @@ self: {
        pname = "swagger2";
        version = "2.2";
        sha256 = "0byzfz52mbnxcmspmk4s43bhprfwrjnh2mkpyfrdir64axqx7yf6";
+       revision = "1";
+       editedCabalFile = "0dhs44zhb2yh4yxw88yvlijcd255ppm1ch7dz7pn7sdv1wr6kxq5";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          aeson base base-compat bytestring containers generics-sop hashable
@@ -194513,8 +196080,8 @@ self: {
      }:
      mkDerivation {
        pname = "sws";
-       version = "0.4.0.1";
-       sha256 = "072njwc5b5jmlh50520nd9ck60xhni6mk3x7c9m8c0bv3h67rnn8";
+       version = "0.4.1.0";
+       sha256 = "1xcbmwpwp2nvi7adihkddpgi9pkdc7q7ly08vm57r56lcpzvs70p";
        isLibrary = false;
        isExecutable = true;
        executableHaskellDepends = [
@@ -194677,8 +196244,8 @@ self: {
      }:
      mkDerivation {
        pname = "symantic";
-       version = "6.3.0.20170807";
-       sha256 = "1w2yyy35w9k3p53x9a51hn5cfja74i6g62jcw2l1bq5cgaakfjgn";
+       version = "6.3.1.20180213";
+       sha256 = "16bbby4lcyna842gvf95ss8fvsp5kgzpn996yxzv3jjhxg00ls5d";
        libraryHaskellDepends = [
          base containers mono-traversable symantic-document symantic-grammar
          text transformers
@@ -194692,8 +196259,8 @@ self: {
     ({ mkDerivation, ansi-terminal, base, text }:
      mkDerivation {
        pname = "symantic-document";
-       version = "0.0.0.20170623";
-       sha256 = "0va9q2lp6vp81sm0vfm10s7ybp34i89bk6p2ry2f0fcr0lhb09i0";
+       version = "0.0.0.20180213";
+       sha256 = "0f3rr8117cr78nkcw7kpddcpisbmvsyw03ym7cq6ms0z8zqynwpm";
        libraryHaskellDepends = [ ansi-terminal base text ];
        description = "Document symantics";
        license = stdenv.lib.licenses.gpl3;
@@ -194705,8 +196272,8 @@ self: {
      }:
      mkDerivation {
        pname = "symantic-grammar";
-       version = "0.2.0.20170709";
-       sha256 = "0vr0j7v2l9sfw8fcfdrhdcb9imgzklmm7p8n6jh9vlshl2d9piwy";
+       version = "0.3.0.20180213";
+       sha256 = "0kqy27c4ix16v7n7zqhc57alrg1n1xksdf7ijsbvpjs4597vpwih";
        libraryHaskellDepends = [ base text ];
        testHaskellDepends = [
          base megaparsec tasty tasty-hunit text transformers
@@ -194717,21 +196284,22 @@ self: {
      }) {};
 
   "symantic-lib" = callPackage
-    ({ mkDerivation, base, containers, ghc-prim, megaparsec
+    ({ mkDerivation, base, bytestring, containers, megaparsec
      , monad-classes, mono-traversable, symantic, symantic-grammar
-     , tasty, tasty-hunit, text, transformers
+     , tasty, tasty-golden, tasty-hunit, text, transformers
      }:
      mkDerivation {
        pname = "symantic-lib";
-       version = "0.0.2.20170703";
-       sha256 = "0ar1ikm42a0apy222y6ii7mjd7fr7n2kpyycyhfznc902jknxk2w";
+       version = "0.0.3.20180213";
+       sha256 = "17y4rmw9l4j3j9g2i60las3q6y7rlklzr48xr8arkhi0i5zi1qw2";
        libraryHaskellDepends = [
-         base containers ghc-prim monad-classes mono-traversable symantic
-         symantic-grammar text transformers
+         base containers mono-traversable symantic symantic-grammar text
+         transformers
        ];
        testHaskellDepends = [
-         base containers megaparsec monad-classes mono-traversable symantic
-         symantic-grammar tasty tasty-hunit text transformers
+         base bytestring containers megaparsec monad-classes
+         mono-traversable symantic symantic-grammar tasty tasty-golden
+         tasty-hunit text transformers
        ];
        description = "Symantics for common types";
        license = stdenv.lib.licenses.gpl3;
@@ -195128,10 +196696,9 @@ self: {
 
   "synthesizer" = callPackage
     ({ mkDerivation, array, base, binary, bytestring, containers
-     , directory, event-list, filepath, gnuplot, non-negative
-     , numeric-prelude, numeric-quest, old-time, process, QuickCheck
-     , random, sox, storable-record, storablevector, transformers
-     , utility-ht
+     , event-list, filepath, gnuplot, non-negative, numeric-prelude
+     , numeric-quest, process, QuickCheck, random, sox, storable-record
+     , storablevector, transformers, utility-ht
      }:
      mkDerivation {
        pname = "synthesizer";
@@ -195144,7 +196711,6 @@ self: {
          non-negative numeric-prelude numeric-quest process QuickCheck
          random sox storable-record storablevector transformers utility-ht
        ];
-       executableHaskellDepends = [ directory old-time ];
        homepage = "http://www.haskell.org/haskellwiki/Synthesizer";
        description = "Audio signal processing coded in Haskell";
        license = "GPL";
@@ -195172,25 +196738,26 @@ self: {
        homepage = "http://www.haskell.org/haskellwiki/Synthesizer";
        description = "Control synthesizer effects via ALSA/MIDI";
        license = "GPL";
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "synthesizer-core" = callPackage
     ({ mkDerivation, array, base, binary, bytestring, containers
      , deepseq, directory, event-list, explicit-exception, filepath
      , non-empty, non-negative, numeric-prelude, numeric-quest, old-time
-     , process, QuickCheck, random, sample-frame-np, sox
+     , process, QuickCheck, random, sample-frame-np, semigroups, sox
      , storable-record, storable-tuple, storablevector, timeit
      , transformers, utility-ht
      }:
      mkDerivation {
        pname = "synthesizer-core";
-       version = "0.8.1.2";
-       sha256 = "0ii0nd76l9la9j148wvaxxzh12269ajmy314v1bk737mz5n126dk";
+       version = "0.8.2";
+       sha256 = "0r8lik2gmaxn1ay0wyjvq2r51jb8vy99hypvrnhbc6hsjybdh8aa";
        libraryHaskellDepends = [
          array base binary bytestring containers deepseq event-list
          explicit-exception filepath non-empty non-negative numeric-prelude
-         numeric-quest process QuickCheck random sample-frame-np sox
-         storable-record storable-tuple storablevector transformers
+         numeric-quest process QuickCheck random sample-frame-np semigroups
+         sox storable-record storable-tuple storablevector transformers
          utility-ht
        ];
        testHaskellDepends = [
@@ -195209,19 +196776,19 @@ self: {
 
   "synthesizer-dimensional" = callPackage
     ({ mkDerivation, base, bytestring, event-list, non-negative
-     , numeric-prelude, random, sox, storable-record, storablevector
-     , synthesizer-core, transformers, utility-ht
+     , numeric-prelude, random, semigroups, sox, storable-record
+     , storablevector, synthesizer-core, transformers, utility-ht
      }:
      mkDerivation {
        pname = "synthesizer-dimensional";
-       version = "0.8.0.2";
-       sha256 = "17d1q57bs7qkd0688qn47fh5m22nfamihdh35sahdl9jf68cb1yn";
+       version = "0.8.1";
+       sha256 = "0a8frn0k4dc0kh71arcqpc1z4dilr8c7yqpp6j80llh12lrcp6f4";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
-         base bytestring event-list non-negative numeric-prelude random sox
-         storable-record storablevector synthesizer-core transformers
-         utility-ht
+         base bytestring event-list non-negative numeric-prelude random
+         semigroups sox storable-record storablevector synthesizer-core
+         transformers utility-ht
        ];
        homepage = "http://www.haskell.org/haskellwiki/Synthesizer";
        description = "Audio signal processing with static physical dimensions";
@@ -195299,19 +196866,19 @@ self: {
   "synthesizer-midi" = callPackage
     ({ mkDerivation, array, base, containers, data-accessor
      , data-accessor-transformers, deepseq, event-list, midi
-     , non-negative, numeric-prelude, sox, storable-record
+     , non-negative, numeric-prelude, semigroups, sox, storable-record
      , storablevector, synthesizer-core, synthesizer-dimensional
      , transformers, utility-ht
      }:
      mkDerivation {
        pname = "synthesizer-midi";
-       version = "0.6.0.4";
-       sha256 = "1xbzqhshhqa8i29gmj503p2bgxzm4sm7rz3kkbw2i4l0vpas2zb0";
+       version = "0.6.1";
+       sha256 = "02z6sywk047vn2is9fq9nr4agdy9xis9ydbl15pmrb0vlmvpx3qr";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
          array base containers data-accessor data-accessor-transformers
-         deepseq event-list midi non-negative numeric-prelude sox
+         deepseq event-list midi non-negative numeric-prelude semigroups sox
          storable-record storablevector synthesizer-core
          synthesizer-dimensional transformers utility-ht
        ];
@@ -195322,6 +196889,7 @@ self: {
        homepage = "http://www.haskell.org/haskellwiki/Synthesizer";
        description = "Render audio signals from MIDI files or realtime messages";
        license = "GPL";
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "sys-auth-smbclient" = callPackage
@@ -195489,8 +197057,8 @@ self: {
     ({ mkDerivation, attoparsec, base, process, text }:
      mkDerivation {
        pname = "system-info";
-       version = "0.1.0.13";
-       sha256 = "0ym1j9bjjv7aa3v1zqklljfyq19agv3imghglfii0qk7mrlyya9d";
+       version = "0.3.0.0";
+       sha256 = "05zp1kddydl9fqbhfpkjvxqfi6l9i1qhif5sziz3d0mymnyrzvpp";
        libraryHaskellDepends = [ attoparsec base process text ];
        testHaskellDepends = [ base ];
        homepage = "https://github.com/ChaosGroup/system-info";
@@ -195675,11 +197243,6 @@ self: {
          template-haskell
        ];
        librarySystemDepends = [ libossp_uuid ];
-       executableHaskellDepends = [
-         base binary bytestring containers murmur-hash parsec
-         template-haskell
-       ];
-       executableSystemDepends = [ libossp_uuid ];
        homepage = "http://github.com/solidsnack/system-uuid/";
        description = "Bindings to system UUID functions";
        license = stdenv.lib.licenses.bsd3;
@@ -196077,7 +197640,6 @@ self: {
          base bytestring containers data-accessor explicit-exception
          non-empty transformers utility-ht xml-basic
        ];
-       executableHaskellDepends = [ base xml-basic ];
        testHaskellDepends = [ base xml-basic ];
        benchmarkHaskellDepends = [
          base bytestring containers data-accessor explicit-exception
@@ -196550,9 +198112,7 @@ self: {
      }) {};
 
   "takusen-oracle" = callPackage
-    ({ mkDerivation, base, clntsh, mtl, old-time, QuickCheck, random
-     , time
-     }:
+    ({ mkDerivation, base, clntsh, mtl, old-time, time }:
      mkDerivation {
        pname = "takusen-oracle";
        version = "0.9.4.1";
@@ -196561,9 +198121,6 @@ self: {
        isExecutable = true;
        libraryHaskellDepends = [ base mtl old-time time ];
        librarySystemDepends = [ clntsh ];
-       executableHaskellDepends = [
-         base mtl old-time QuickCheck random time
-       ];
        homepage = "https://github.com/paulrzcz/takusen-oracle.git";
        description = "Database library with left-fold interface for Oracle";
        license = stdenv.lib.licenses.bsd3;
@@ -196742,21 +198299,22 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "tar-conduit_0_2_1" = callPackage
+  "tar-conduit_0_2_3" = callPackage
     ({ mkDerivation, base, bytestring, conduit, conduit-combinators
-     , containers, criterion, deepseq, directory, filepath, hspec, unix
-     , weigh
+     , containers, criterion, deepseq, directory, filepath, hspec
+     , QuickCheck, safe-exceptions, text, unix, weigh
      }:
      mkDerivation {
        pname = "tar-conduit";
-       version = "0.2.1";
-       sha256 = "09mpkr05f6vwhrk3r8fafs8rsgc10dkkgws356ciy3rz9y8xfjw2";
+       version = "0.2.3";
+       sha256 = "1is2q5662zrrxgb2dm2n1qa1aqdrwf4g7il5jdpxhri28m7pp7jp";
        libraryHaskellDepends = [
-         base bytestring conduit-combinators directory filepath unix
+         base bytestring conduit conduit-combinators directory filepath
+         safe-exceptions text unix
        ];
        testHaskellDepends = [
          base bytestring conduit conduit-combinators containers deepseq
-         directory filepath hspec weigh
+         directory filepath hspec QuickCheck weigh
        ];
        benchmarkHaskellDepends = [
          base bytestring conduit conduit-combinators containers criterion
@@ -196939,18 +198497,17 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "tasty_1_0_0_1" = callPackage
-    ({ mkDerivation, ansi-terminal, async, base, clock, containers
-     , deepseq, mtl, optparse-applicative, stm, tagged, unbounded-delays
-     , unix
+  "tasty_1_0_1" = callPackage
+    ({ mkDerivation, ansi-terminal, async, base, clock, containers, mtl
+     , optparse-applicative, stm, tagged, unbounded-delays, unix
      }:
      mkDerivation {
        pname = "tasty";
-       version = "1.0.0.1";
-       sha256 = "0ggqffw9kbb6nlq1pplk131qzxndqqzqyf4s2p7576nljx11a7qf";
+       version = "1.0.1";
+       sha256 = "1jf53dd7ilwqfj27ndx2dgs76a7s0saakqxm9cr6bb42a0jnzqij";
        libraryHaskellDepends = [
-         ansi-terminal async base clock containers deepseq mtl
-         optparse-applicative stm tagged unbounded-delays unix
+         ansi-terminal async base clock containers mtl optparse-applicative
+         stm tagged unbounded-delays unix
        ];
        homepage = "https://github.com/feuerbach/tasty";
        description = "Modern and extensible testing framework";
@@ -196965,24 +198522,6 @@ self: {
      }:
      mkDerivation {
        pname = "tasty-ant-xml";
-       version = "1.1.2";
-       sha256 = "10k8092iz8klx7wa3ajfny8zvrxv3clz330v3qz3k7dmbj596nhq";
-       libraryHaskellDepends = [
-         base containers directory filepath generic-deriving ghc-prim mtl
-         stm tagged tasty transformers xml
-       ];
-       homepage = "http://github.com/ocharles/tasty-ant-xml";
-       description = "Render tasty output to XML for Jenkins";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "tasty-ant-xml_1_1_3" = callPackage
-    ({ mkDerivation, base, containers, directory, filepath
-     , generic-deriving, ghc-prim, mtl, stm, tagged, tasty, transformers
-     , xml
-     }:
-     mkDerivation {
-       pname = "tasty-ant-xml";
        version = "1.1.3";
        sha256 = "0nxrvxk83mv29yhywswg21q156zdzs02xrwqambnz78pldsrbk4n";
        libraryHaskellDepends = [
@@ -196992,7 +198531,6 @@ self: {
        homepage = "http://github.com/ocharles/tasty-ant-xml";
        description = "Render tasty output to XML for Jenkins";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "tasty-auto" = callPackage
@@ -197029,12 +198567,12 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "tasty-dejafu_1_0_0_1" = callPackage
+  "tasty-dejafu_1_0_1_0" = callPackage
     ({ mkDerivation, base, dejafu, random, tagged, tasty }:
      mkDerivation {
        pname = "tasty-dejafu";
-       version = "1.0.0.1";
-       sha256 = "1b06x1z6bc010w4nfz7hf5qb35z6cwa8bz35qd4526qnxqf88qf5";
+       version = "1.0.1.0";
+       sha256 = "1japzchg9sxy08rjj9vvr3qxil1bzhn3i3qxr00pf0qpxnd5ssmc";
        libraryHaskellDepends = [ base dejafu random tagged tasty ];
        homepage = "https://github.com/barrucadu/dejafu";
        description = "Deja Fu support for the Tasty test framework";
@@ -197121,6 +198659,28 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "tasty-golden_2_3_1_3" = callPackage
+    ({ mkDerivation, async, base, bytestring, containers, deepseq
+     , directory, filepath, mtl, optparse-applicative, process, tagged
+     , tasty, tasty-hunit, temporary, temporary-rc
+     }:
+     mkDerivation {
+       pname = "tasty-golden";
+       version = "2.3.1.3";
+       sha256 = "1xri8bnj22gzxkxz4hi2vqx0aaz51ww3zz9ac0ig0lw653kbj61p";
+       libraryHaskellDepends = [
+         async base bytestring containers deepseq directory filepath mtl
+         optparse-applicative process tagged tasty temporary
+       ];
+       testHaskellDepends = [
+         base directory filepath process tasty tasty-hunit temporary-rc
+       ];
+       homepage = "https://github.com/feuerbach/tasty-golden";
+       description = "Golden tests support for tasty";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "tasty-groundhog-converters" = callPackage
     ({ mkDerivation, aeson, base, bimap, bytestring, containers
      , groundhog, groundhog-converters, groundhog-sqlite, groundhog-th
@@ -197159,6 +198719,24 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "tasty-hedgehog_0_1_0_2" = callPackage
+    ({ mkDerivation, base, hedgehog, tagged, tasty
+     , tasty-expected-failure
+     }:
+     mkDerivation {
+       pname = "tasty-hedgehog";
+       version = "0.1.0.2";
+       sha256 = "0cjdi0kpwpb4m5ad1y47x52336xfza4m82h5zg76r75f7fvzzh8x";
+       libraryHaskellDepends = [ base hedgehog tagged tasty ];
+       testHaskellDepends = [
+         base hedgehog tasty tasty-expected-failure
+       ];
+       homepage = "https://github.com/qfpl/tasty-hedghog";
+       description = "Integrates the hedgehog testing library with the tasty testing framework";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "tasty-hspec" = callPackage
     ({ mkDerivation, base, hspec, hspec-core, QuickCheck, tasty
      , tasty-quickcheck, tasty-smallcheck
@@ -197367,15 +198945,19 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "tasty-quickcheck_0_9_2" = callPackage
-    ({ mkDerivation, base, pcre-light, QuickCheck, random, tagged
-     , tasty, tasty-hunit
+  "tasty-quickcheck_0_10" = callPackage
+    ({ mkDerivation, base, optparse-applicative, pcre-light, QuickCheck
+     , random, tagged, tasty, tasty-hunit
      }:
      mkDerivation {
        pname = "tasty-quickcheck";
-       version = "0.9.2";
-       sha256 = "0wsqm4fjxnh64sjlccjapvgvw4dhl603qpxl79g3sa3fmgg0m4n5";
-       libraryHaskellDepends = [ base QuickCheck random tagged tasty ];
+       version = "0.10";
+       sha256 = "0vr6szbbz3s5461i0zr8zpq347zfvidfzv5gf3xwxhm0yk731z8h";
+       revision = "1";
+       editedCabalFile = "1ndkkywcqgb2wj339vgckjv5915da5kd4ixlkaww9fsba3qsrnwx";
+       libraryHaskellDepends = [
+         base optparse-applicative QuickCheck random tagged tasty
+       ];
        testHaskellDepends = [ base pcre-light tasty tasty-hunit ];
        homepage = "https://github.com/feuerbach/tasty";
        description = "QuickCheck support for the Tasty test framework";
@@ -197389,23 +198971,6 @@ self: {
      }:
      mkDerivation {
        pname = "tasty-rerun";
-       version = "1.1.9";
-       sha256 = "0piwv5nrqvwnzp76xpsjlncrl2cd9jsxxb1ghkaijn2fi2c63akd";
-       libraryHaskellDepends = [
-         base containers mtl optparse-applicative reducers split stm tagged
-         tasty transformers
-       ];
-       homepage = "http://github.com/ocharles/tasty-rerun";
-       description = "Run tests by filtering the test tree depending on the result of previous test runs";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "tasty-rerun_1_1_10" = callPackage
-    ({ mkDerivation, base, containers, mtl, optparse-applicative
-     , reducers, split, stm, tagged, tasty, transformers
-     }:
-     mkDerivation {
-       pname = "tasty-rerun";
        version = "1.1.10";
        sha256 = "1776fx700wlc9spn0dh3x4nh44x2yg33z9zyqzqlpwrhrkpaz91b";
        libraryHaskellDepends = [
@@ -197415,7 +198980,6 @@ self: {
        homepage = "http://github.com/ocharles/tasty-rerun";
        description = "Run tests by filtering the test tree depending on the result of previous test runs";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "tasty-silver" = callPackage
@@ -197630,7 +199194,6 @@ self: {
          base bytestring containers inline-c repa sdl2 vector
        ];
        librarySystemDepends = [ tcod ];
-       executableHaskellDepends = [ base ];
        homepage = "https://github.com/ncrashed/tcod-haskell#readme";
        description = "Bindings to libtcod roguelike engine";
        license = stdenv.lib.licenses.bsd3;
@@ -199246,24 +200809,21 @@ self: {
      }) {};
 
   "testbench" = callPackage
-    ({ mkDerivation, base, bytestring, cassava, containers, criterion
-     , deepseq, dlist, HUnit, optparse-applicative, process, resourcet
-     , statistics, streaming, streaming-bytestring, streaming-cassava
-     , temporary, transformers, weigh
+    ({ mkDerivation, base, bytestring, cassava, criterion, deepseq
+     , dlist, HUnit, optparse-applicative, process, statistics
+     , streaming, streaming-cassava, streaming-with, temporary
+     , transformers, weigh
      }:
      mkDerivation {
        pname = "testbench";
-       version = "0.2.1.0";
-       sha256 = "0pka1vmzh4x0pzwlrxzzsjaxjd7py43m5ph3barwfrbjkqbyjzj6";
+       version = "0.2.1.1";
+       sha256 = "0ps4q86258j41iv3xisxw3154xgxg0dmk3khc4ibr1k0dbvkr8r6";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
          base bytestring cassava criterion deepseq dlist HUnit
-         optparse-applicative process resourcet statistics streaming
-         streaming-bytestring streaming-cassava temporary transformers weigh
-       ];
-       executableHaskellDepends = [
-         base bytestring containers criterion HUnit
+         optparse-applicative process statistics streaming streaming-cassava
+         streaming-with temporary transformers weigh
        ];
        description = "Create tests and benchmarks together";
        license = stdenv.lib.licenses.mit;
@@ -199420,8 +200980,8 @@ self: {
 
   "texmath" = callPackage
     ({ mkDerivation, base, bytestring, containers, directory, filepath
-     , mtl, network-uri, pandoc-types, parsec, process, split, syb
-     , temporary, text, utf8-string, xml
+     , mtl, pandoc-types, parsec, process, split, syb, temporary, text
+     , utf8-string, xml
      }:
      mkDerivation {
        pname = "texmath";
@@ -199432,7 +200992,6 @@ self: {
        libraryHaskellDepends = [
          base containers mtl pandoc-types parsec syb xml
        ];
-       executableHaskellDepends = [ network-uri ];
        testHaskellDepends = [
          base bytestring directory filepath process split temporary text
          utf8-string xml
@@ -199801,29 +201360,6 @@ self: {
      }) {};
 
   "text-ldap" = callPackage
-    ({ mkDerivation, attoparsec, base, base64-bytestring, bytestring
-     , containers, dlist, QuickCheck, quickcheck-simple, random
-     , transformers
-     }:
-     mkDerivation {
-       pname = "text-ldap";
-       version = "0.1.1.10";
-       sha256 = "13wjarsshp64cc632bqmckx664a57w7cnlm8gs7rfp1bcm7vdnjk";
-       isLibrary = true;
-       isExecutable = true;
-       libraryHaskellDepends = [
-         attoparsec base base64-bytestring bytestring containers dlist
-         transformers
-       ];
-       executableHaskellDepends = [ base bytestring ];
-       testHaskellDepends = [
-         base bytestring QuickCheck quickcheck-simple random
-       ];
-       description = "Parser and Printer for LDAP text data stream";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "text-ldap_0_1_1_11" = callPackage
     ({ mkDerivation, attoparsec, base, bytestring, containers, dlist
      , memory, QuickCheck, quickcheck-simple, random, transformers
      }:
@@ -199842,7 +201378,6 @@ self: {
        ];
        description = "Parser and Printer for LDAP text data stream";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "text-lens" = callPackage
@@ -200102,8 +201637,8 @@ self: {
      }:
      mkDerivation {
        pname = "text-replace";
-       version = "0.0.0.1";
-       sha256 = "15qf0pwjhaa2zwdzixil5q1iqs5cwlazggzsgwwq553jlggbf063";
+       version = "0.0.0.2";
+       sha256 = "1qd3i8sj6z0vgb2yn345wh16w0lvmqdvywrkpcdsmbc00j8cwkjq";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base containers ];
@@ -200812,19 +202347,6 @@ self: {
     ({ mkDerivation, base, ghc-prim, template-haskell }:
      mkDerivation {
        pname = "th-lift";
-       version = "0.7.7";
-       sha256 = "1dfb0z42vrmdx579lkam07ic03d3v5y19339a3ca0bwpprpzmihn";
-       libraryHaskellDepends = [ base ghc-prim template-haskell ];
-       testHaskellDepends = [ base ghc-prim template-haskell ];
-       homepage = "http://github.com/mboes/th-lift";
-       description = "Derive Template Haskell's Lift class for datatypes";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "th-lift_0_7_8" = callPackage
-    ({ mkDerivation, base, ghc-prim, template-haskell }:
-     mkDerivation {
-       pname = "th-lift";
        version = "0.7.8";
        sha256 = "0ay10b78x3969rpqqrgzy8srkl6iby2cljbf3mm17na8x22k7y1c";
        libraryHaskellDepends = [ base ghc-prim template-haskell ];
@@ -200832,7 +202354,6 @@ self: {
        homepage = "http://github.com/mboes/th-lift";
        description = "Derive Template Haskell's Lift class for datatypes";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "th-lift-instances" = callPackage
@@ -200883,20 +202404,23 @@ self: {
      }) {};
 
   "th-printf" = callPackage
-    ({ mkDerivation, attoparsec, base, bytestring, hspec, HUnit
-     , QuickCheck, template-haskell, text, transformers
+    ({ mkDerivation, ansi-wl-pprint, attoparsec, base, bytestring
+     , charset, containers, criterion, hspec, HUnit, QuickCheck
+     , template-haskell, text, transformers, trifecta, utf8-string
      }:
      mkDerivation {
        pname = "th-printf";
-       version = "0.3.1";
-       sha256 = "089grlpavvqv90graa9rdwg9x1ph484g5bj7sfjklqy8mgwwqg7a";
+       version = "0.5.0";
+       sha256 = "1fn1l503x3y5dgv8wsgyxhm66dyvdvfalzmwmsqf86sy643qjpw6";
        libraryHaskellDepends = [
-         attoparsec base bytestring template-haskell text transformers
+         ansi-wl-pprint attoparsec base charset containers template-haskell
+         text transformers trifecta utf8-string
        ];
        testHaskellDepends = [
          base bytestring hspec HUnit QuickCheck template-haskell text
        ];
-       homepage = "https://github.com/joelteon/th-printf";
+       benchmarkHaskellDepends = [ base criterion text ];
+       homepage = "https://github.com/pikajude/th-printf";
        description = "Compile-time printf";
        license = stdenv.lib.licenses.mit;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -201405,8 +202929,8 @@ self: {
      }:
      mkDerivation {
        pname = "threadscope";
-       version = "0.2.9";
-       sha256 = "1ayn5ahfkdh367m8x0xwr8f5pqy8z41wmc60b78a1d3p44j86aq7";
+       version = "0.2.10";
+       sha256 = "1wmj5a7kfyj8msi9gfvd48rr4vpl4ggd251yrj09ly5la98zs8pv";
        isLibrary = false;
        isExecutable = true;
        enableSeparateDataOutput = true;
@@ -201452,10 +202976,6 @@ self: {
          base bifunctors casing containers generics-sop profunctors text
          threepenny-gui
        ];
-       executableHaskellDepends = [
-         base bifunctors casing containers generics-sop profunctors text
-         threepenny-gui
-       ];
        homepage = "https://github.com/pepeiborra/threepenny-editors";
        description = "Composable algebraic editors";
        license = stdenv.lib.licenses.bsd3;
@@ -201486,6 +203006,32 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "threepenny-gui_0_8_2_1" = callPackage
+    ({ mkDerivation, aeson, async, base, bytestring, containers
+     , data-default, deepseq, exceptions, file-embed, filepath, hashable
+     , network-uri, safe, snap-core, snap-server, stm, template-haskell
+     , text, transformers, unordered-containers, vault, vector
+     , websockets, websockets-snap
+     }:
+     mkDerivation {
+       pname = "threepenny-gui";
+       version = "0.8.2.1";
+       sha256 = "0ky9nsrihiqbg1sizz7yhrif672l1gr5p4nqn9lxcchlf4d2hyl2";
+       isLibrary = true;
+       isExecutable = true;
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         aeson async base bytestring containers data-default deepseq
+         exceptions file-embed filepath hashable network-uri safe snap-core
+         snap-server stm template-haskell text transformers
+         unordered-containers vault vector websockets websockets-snap
+       ];
+       homepage = "http://wiki.haskell.org/Threepenny-gui";
+       description = "GUI framework that uses the web browser as a display";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "threepenny-gui-contextmenu" = callPackage
     ({ mkDerivation, base, threepenny-gui }:
      mkDerivation {
@@ -202347,14 +203893,14 @@ self: {
   "time-warp" = callPackage
     ({ mkDerivation, ansi-terminal, array, async, attoparsec, base
      , binary, binary-conduit, bytestring, conduit, conduit-extra
-     , containers, data-default, data-msgpack, deepseq, directory
-     , exceptions, extra, formatting, hashable, hslogger, hspec, lens
-     , lifted-base, log-warper, mmorph, monad-control, monad-loops
-     , MonadRandom, mtl, network, optparse-simple, pqueue, QuickCheck
-     , quickcheck-instances, random, resourcet, safe, semigroups
-     , serokell-util, slave-thread, stm, stm-chans, stm-conduit
-     , streaming-commons, template-haskell, text, text-format, time
-     , time-units, transformers, transformers-base, unordered-containers
+     , containers, data-default, data-msgpack, deepseq, exceptions
+     , extra, formatting, hashable, hspec, lens, lifted-base, log-warper
+     , mmorph, monad-control, monad-loops, MonadRandom, mtl, network
+     , pqueue, QuickCheck, quickcheck-instances, random, safe
+     , semigroups, serokell-util, slave-thread, stm, stm-chans
+     , stm-conduit, streaming-commons, template-haskell, text
+     , text-format, time, time-units, transformers, transformers-base
+     , unordered-containers
      }:
      mkDerivation {
        pname = "time-warp";
@@ -202372,14 +203918,6 @@ self: {
          streaming-commons template-haskell text text-format time time-units
          transformers transformers-base unordered-containers
        ];
-       executableHaskellDepends = [
-         async attoparsec base binary binary-conduit bytestring conduit
-         conduit-extra containers data-default data-msgpack directory
-         exceptions extra formatting hslogger hspec lens log-warper
-         monad-control monad-loops MonadRandom mtl optparse-simple
-         QuickCheck random resourcet serokell-util stm text text-format time
-         time-units transformers unordered-containers
-       ];
        testHaskellDepends = [
          async base data-default data-msgpack exceptions hspec lens
          log-warper mtl QuickCheck random serokell-util stm text text-format
@@ -202430,6 +203968,19 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "timeit_2_0" = callPackage
+    ({ mkDerivation, base }:
+     mkDerivation {
+       pname = "timeit";
+       version = "2.0";
+       sha256 = "1sliqpvl501rlcj6s0lhmsf5ym24j4h881wzc1f1wdyvg3jz8kd1";
+       libraryHaskellDepends = [ base ];
+       homepage = "https://github.com/merijn/timeit";
+       description = "Time monadic computations with an IO base";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "timelens" = callPackage
     ({ mkDerivation, base, lens, time }:
      mkDerivation {
@@ -202522,10 +204073,6 @@ self: {
          base containers focus hashable list-t stm stm-containers time
          unordered-containers
        ];
-       executableHaskellDepends = [
-         base containers focus hashable list-t stm stm-containers time
-         unordered-containers
-       ];
        testHaskellDepends = [
          base containers focus hashable list-t QuickCheck
          quickcheck-instances stm stm-containers tasty tasty-hunit
@@ -202878,8 +204425,8 @@ self: {
     ({ mkDerivation, base, c2hs, text }:
      mkDerivation {
        pname = "tinyfiledialogs";
-       version = "0.2.0.0";
-       sha256 = "16vzn532204vs39lfsf7q20zkhncqgk1vzqls9x2cy8kzdzrqlm4";
+       version = "0.2.1.0";
+       sha256 = "1nbsbzh33q4py5164lsif08ll98ysiz5d2ysvz4lcrf4jh9vgggg";
        libraryHaskellDepends = [ base text ];
        libraryToolDepends = [ c2hs ];
        homepage = "https://github.com/mtolly/tinyfiledialogs";
@@ -203039,12 +204586,12 @@ self: {
      }) {};
 
   "tkyprof" = callPackage
-    ({ mkDerivation, aeson, attoparsec, base, blaze-builder, bytestring
-     , cmdargs, conduit, conduit-extra, containers, data-default
-     , directory, exceptions, filepath, http-types, mtl, resourcet
-     , rosezipper, shakespeare, stm, template-haskell, text, time
-     , transformers, unordered-containers, vector, wai, wai-extra, warp
-     , web-routes, yesod, yesod-core, yesod-form, yesod-static
+    ({ mkDerivation, aeson, attoparsec, base, bytestring, cmdargs
+     , conduit, conduit-extra, containers, data-default, directory
+     , exceptions, filepath, http-types, mtl, resourcet, rosezipper
+     , shakespeare, stm, template-haskell, text, time, transformers
+     , unordered-containers, vector, wai, wai-extra, warp, web-routes
+     , yesod, yesod-core, yesod-form, yesod-static
      }:
      mkDerivation {
        pname = "tkyprof";
@@ -203054,12 +204601,11 @@ self: {
        isExecutable = true;
        enableSeparateDataOutput = true;
        executableHaskellDepends = [
-         aeson attoparsec base blaze-builder bytestring cmdargs conduit
-         conduit-extra containers data-default directory exceptions filepath
-         http-types mtl resourcet rosezipper shakespeare stm
-         template-haskell text time transformers unordered-containers vector
-         wai wai-extra warp web-routes yesod yesod-core yesod-form
-         yesod-static
+         aeson attoparsec base bytestring cmdargs conduit conduit-extra
+         containers data-default directory exceptions filepath http-types
+         mtl resourcet rosezipper shakespeare stm template-haskell text time
+         transformers unordered-containers vector wai wai-extra warp
+         web-routes yesod yesod-core yesod-form yesod-static
        ];
        homepage = "https://github.com/maoe/tkyprof";
        description = "A web-based visualizer for GHC Profiling Reports";
@@ -203498,9 +205044,20 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "tokenizer-monad" = callPackage
+    ({ mkDerivation, base, text }:
+     mkDerivation {
+       pname = "tokenizer-monad";
+       version = "0.1.0.0";
+       sha256 = "1n31n3wql93ljjgzfxpl5qd7kdb3dmr00yw0sz0wkkfgh2id1m99";
+       libraryHaskellDepends = [ base text ];
+       description = "An efficient and easy-to-use tokenizer monad";
+       license = stdenv.lib.licenses.gpl3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "toktok" = callPackage
-    ({ mkDerivation, base, bytestring, containers, criterion, filepath
-     , gf, haskell98, HUnit, iconv, progression, QuickCheck
+    ({ mkDerivation, base, bytestring, containers, gf, haskell98, iconv
      }:
      mkDerivation {
        pname = "toktok";
@@ -203509,10 +205066,7 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base containers haskell98 ];
-       executableHaskellDepends = [
-         base bytestring criterion filepath gf HUnit iconv progression
-         QuickCheck
-       ];
+       executableHaskellDepends = [ base bytestring gf iconv ];
        license = "GPL";
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
@@ -203831,18 +205385,17 @@ self: {
      }) {toxcore = null;};
 
   "toysolver" = callPackage
-    ({ mkDerivation, array, attoparsec, base, bytestring
-     , bytestring-builder, clock, containers, criterion, data-default
-     , data-default-class, data-interval, deepseq, directory
-     , extended-reals, filepath, finite-field, ghc-prim, hashable
-     , hashtables, haskeline, heaps, intern, lattices, log-domain, loop
-     , megaparsec, mtl, multiset, mwc-random, OptDir, parsec
-     , prettyclass, primes, primitive, process, pseudo-boolean, queue
-     , QuickCheck, scientific, semigroups, sign, split, stm, tasty
-     , tasty-hunit, tasty-quickcheck, tasty-th, template-haskell
-     , temporary, text, time, transformers, transformers-compat
-     , unbounded-delays, unordered-containers, vector, vector-space
-     , xml-conduit
+    ({ mkDerivation, array, base, bytestring, bytestring-builder, clock
+     , containers, criterion, data-default, data-default-class
+     , data-interval, deepseq, directory, extended-reals, filepath
+     , finite-field, ghc-prim, hashable, hashtables, haskeline, heaps
+     , intern, lattices, log-domain, loop, megaparsec, mtl, multiset
+     , mwc-random, OptDir, parsec, prettyclass, primes, primitive
+     , process, pseudo-boolean, queue, QuickCheck, scientific
+     , semigroups, sign, stm, tasty, tasty-hunit, tasty-quickcheck
+     , tasty-th, template-haskell, temporary, text, time, transformers
+     , transformers-compat, unbounded-delays, unordered-containers
+     , vector, vector-space, xml-conduit
      }:
      mkDerivation {
        pname = "toysolver";
@@ -203861,11 +205414,11 @@ self: {
          vector-space xml-conduit
        ];
        executableHaskellDepends = [
-         array attoparsec base bytestring bytestring-builder clock
-         containers data-default data-default-class directory filepath
-         haskeline intern megaparsec mtl mwc-random OptDir parsec process
-         pseudo-boolean scientific split temporary text time transformers
-         transformers-compat unbounded-delays unordered-containers vector
+         array base bytestring bytestring-builder clock containers
+         data-default data-default-class directory filepath haskeline intern
+         megaparsec mtl mwc-random OptDir parsec process pseudo-boolean
+         scientific temporary text time transformers transformers-compat
+         unbounded-delays vector
        ];
        testHaskellDepends = [
          array base bytestring bytestring-builder containers
@@ -204782,19 +206335,20 @@ self: {
      }) {};
 
   "treemap" = callPackage
-    ({ mkDerivation, base, containers, deepseq, semigroups, strict
-     , tasty, tasty-hunit, text, transformers
+    ({ mkDerivation, base, containers, deepseq, mono-traversable
+     , semigroups, strict, tasty, tasty-hunit, text, transformers
      }:
      mkDerivation {
        pname = "treemap";
-       version = "2.0.0.20161218";
-       sha256 = "18xhsih3q9vmakzjk3mhb9ckp9m7vs16dikf9ry4yhfsyv2v57vh";
+       version = "2.4.0.20180213";
+       sha256 = "1yf0ihawdp51n6j1j5b4s7f1xxsyg0spaamhwpd8pmm0fncr8c2s";
        libraryHaskellDepends = [
-         base containers deepseq semigroups strict transformers
+         base containers deepseq mono-traversable semigroups strict
+         transformers
        ];
        testHaskellDepends = [
-         base containers semigroups strict tasty tasty-hunit text
-         transformers
+         base containers mono-traversable semigroups strict tasty
+         tasty-hunit text transformers
        ];
        description = "A tree of Data.Map.";
        license = stdenv.lib.licenses.gpl3;
@@ -204851,6 +206405,17 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "treeseq" = callPackage
+    ({ mkDerivation, base, containers }:
+     mkDerivation {
+       pname = "treeseq";
+       version = "1.0.0.20180213";
+       sha256 = "105gj9s8gp4xc4i7ank8m6pjc80kywl7vn53qdxfrndaljv4kark";
+       libraryHaskellDepends = [ base containers ];
+       description = "Library for a multi-way tree (rose tree), using Seq (finger tree) for forests";
+       license = stdenv.lib.licenses.gpl3;
+     }) {};
+
   "treeviz" = callPackage
     ({ mkDerivation, base, containers, mtl, QuickCheck, random }:
      mkDerivation {
@@ -204860,10 +206425,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base containers mtl QuickCheck random ];
-       executableHaskellDepends = [
-         base containers mtl QuickCheck random
-       ];
-       testHaskellDepends = [ base containers mtl QuickCheck random ];
        homepage = "http://www.haskell.org/haskellwiki/Treeviz";
        description = "Visualization of computation decomposition trees";
        license = stdenv.lib.licenses.bsd3;
@@ -204952,8 +206513,8 @@ self: {
        pname = "trifecta";
        version = "1.7.1.1";
        sha256 = "13n6a3fdxngnzsjnhfrzigv1c2g0xm6lqkjcnirpc37sd0rpby31";
-       revision = "2";
-       editedCabalFile = "1pbywxk2aw0bkhkhhcdqhxnkvyxxnrj13qahlzf2ivd5awmynmqp";
+       revision = "3";
+       editedCabalFile = "18n50vn8znpwci2f333wsqzr8zkj35ki5z8bs9a2717yhzyha4k8";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          ansi-terminal ansi-wl-pprint array base blaze-builder blaze-html
@@ -205269,8 +206830,8 @@ self: {
      }) {};
 
   "tsparse" = callPackage
-    ({ mkDerivation, base, Decimal, parsec, pretty, process, random
-     , split, time
+    ({ mkDerivation, base, Decimal, parsec, pretty, process, split
+     , time
      }:
      mkDerivation {
        pname = "tsparse";
@@ -205281,9 +206842,6 @@ self: {
        libraryHaskellDepends = [
          base Decimal parsec pretty process split time
        ];
-       executableHaskellDepends = [
-         base Decimal parsec pretty process random split time
-       ];
        homepage = "http://www.github.com/massysett/tsparse";
        description = "Parses U.S. federal Thrift Savings Plan PDF quarterly statements";
        license = stdenv.lib.licenses.bsd3;
@@ -205410,23 +206968,23 @@ self: {
      }) {};
 
   "tttool" = callPackage
-    ({ mkDerivation, aeson, base, binary, bytestring, containers
-     , directory, executable-path, filepath, hashable, haskeline, HPDF
-     , JuicyPixels, mtl, natural-sort, optparse-applicative, parsec
-     , process, random, split, spool, template-haskell, time, vector
-     , yaml, zlib
+    ({ mkDerivation, aeson, base, base64-bytestring, binary, blaze-svg
+     , bytestring, containers, directory, executable-path, filepath
+     , hashable, haskeline, HPDF, JuicyPixels, mtl, natural-sort
+     , optparse-applicative, parsec, process, random, split, spool
+     , template-haskell, text, time, vector, yaml, zlib
      }:
      mkDerivation {
        pname = "tttool";
-       version = "1.7.0.3";
-       sha256 = "0r8ha8wgzlf2ymyxylj16hfshf8w5dl13cwmdkl6ih2niwkzk9ch";
+       version = "1.8";
+       sha256 = "0j4lgkjg28i7wlz5rnlrii6mzx2bqsagrg3wiiw1z2ncik6qm472";
        isLibrary = false;
        isExecutable = true;
        executableHaskellDepends = [
-         aeson base binary bytestring containers directory executable-path
-         filepath hashable haskeline HPDF JuicyPixels mtl natural-sort
-         optparse-applicative parsec process random split spool
-         template-haskell time vector yaml zlib
+         aeson base base64-bytestring binary blaze-svg bytestring containers
+         directory executable-path filepath hashable haskeline HPDF
+         JuicyPixels mtl natural-sort optparse-applicative parsec process
+         random split spool template-haskell text time vector yaml zlib
        ];
        homepage = "https://github.com/entropia/tip-toi-reveng";
        description = "Working with files for the Tiptoi® pen";
@@ -205656,12 +207214,17 @@ self: {
      }) {};
 
   "turingMachine" = callPackage
-    ({ mkDerivation, base, containers }:
+    ({ mkDerivation, base, containers, hspec, hspecVariant, mtl
+     , QuickCheck, QuickCheckVariant
+     }:
      mkDerivation {
        pname = "turingMachine";
-       version = "0.1.3.0";
-       sha256 = "1z7sgvnfdj70lqd330pmv3ms8mxxd0xh8pp41hxggg95kxqmbci6";
-       libraryHaskellDepends = [ base containers ];
+       version = "1.0.0.0";
+       sha256 = "04lpvqandjqwwy494a5mb4nvig8lw3fn9ncrb8d2gkfklxga17gp";
+       libraryHaskellDepends = [ base containers mtl ];
+       testHaskellDepends = [
+         base containers hspec hspecVariant QuickCheck QuickCheckVariant
+       ];
        homepage = "https://github.com/sanjorgek/turingMachine";
        description = "An implementation of Turing Machine and Automaton";
        license = stdenv.lib.licenses.gpl3;
@@ -205721,7 +207284,7 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "turtle_1_5_1" = callPackage
+  "turtle_1_5_3" = callPackage
     ({ mkDerivation, ansi-wl-pprint, async, base, bytestring, clock
      , containers, criterion, directory, doctest, exceptions, foldl
      , hostname, managed, optional-args, optparse-applicative, process
@@ -205730,8 +207293,8 @@ self: {
      }:
      mkDerivation {
        pname = "turtle";
-       version = "1.5.1";
-       sha256 = "06yya57w3i598b6h3gkhv8zs0a3f1az12x8viy16sgdbgwph8scm";
+       version = "1.5.3";
+       sha256 = "0pxhi3y051y8yll8bc4dv7sz2wbhf70lr8saxsassjw71hrhgs3s";
        libraryHaskellDepends = [
          ansi-wl-pprint async base bytestring clock containers directory
          exceptions foldl hostname managed optional-args
@@ -205790,20 +207353,16 @@ self: {
      }) {};
 
   "twee" = callPackage
-    ({ mkDerivation, base, containers, dlist, ghc-prim, jukebox, pretty
-     , primitive, split, transformers
+    ({ mkDerivation, base, containers, jukebox, pretty, split, twee-lib
      }:
      mkDerivation {
        pname = "twee";
-       version = "2.0";
-       sha256 = "18raccm4glf0gysj625wiwkk2b295863g0hgypc9335cxb65n8k0";
-       isLibrary = true;
+       version = "2.1.1";
+       sha256 = "08mhq7yr66hgs6p01wx935xr59pm427qxyz8qd9f00lbgkhjbvzc";
+       isLibrary = false;
        isExecutable = true;
-       libraryHaskellDepends = [
-         base containers dlist ghc-prim pretty primitive transformers
-       ];
        executableHaskellDepends = [
-         base containers jukebox pretty split
+         base containers jukebox pretty split twee-lib
        ];
        homepage = "http://github.com/nick8325/twee";
        description = "An equational theorem prover";
@@ -205811,6 +207370,22 @@ self: {
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "twee-lib" = callPackage
+    ({ mkDerivation, base, containers, dlist, ghc-prim, pretty
+     , primitive, transformers, vector
+     }:
+     mkDerivation {
+       pname = "twee-lib";
+       version = "2.1.1";
+       sha256 = "00c9qwx27qsljpvvywljssncw805qd2aq8vwcyqqawjcpbyrxf0d";
+       libraryHaskellDepends = [
+         base containers dlist ghc-prim pretty primitive transformers vector
+       ];
+       homepage = "http://github.com/nick8325/twee";
+       description = "An equational theorem prover";
+       license = stdenv.lib.licenses.bsd3;
+     }) {};
+
   "tweet-hs" = callPackage
     ({ mkDerivation, aeson, ansi-wl-pprint, authenticate-oauth, base
      , bytestring, composition-prelude, containers, criterion
@@ -205820,8 +207395,8 @@ self: {
      }:
      mkDerivation {
        pname = "tweet-hs";
-       version = "1.0.1.33";
-       sha256 = "0r1aq1w3nis3rqd94yrg2idkqbcrzs0dsnvbrmrny65b7l50zzbk";
+       version = "1.0.1.35";
+       sha256 = "1rg7yn5072dr8kpd5m3c4p1brq9sbs2npvvyqkjpvfxsbyziblw7";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -206098,6 +207673,7 @@ self: {
        homepage = "https://github.com/markandrus/twilio-haskell";
        description = "Twilio REST API library for Haskell";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "twill" = callPackage
@@ -206694,8 +208270,8 @@ self: {
     ({ mkDerivation, base, data-default, nats, numericpeano, text }:
      mkDerivation {
        pname = "type-iso";
-       version = "0.1.0.0";
-       sha256 = "03qs8frsj0a2jxpk1rrmhaivf68hg8dhjn4s3q85h4zrsxwfskjx";
+       version = "1.0.0.0";
+       sha256 = "11xcadzvvp9y7gm54k0nfsnx0hfr3g5bd8g8f8mlfqy24p0mq1m1";
        libraryHaskellDepends = [
          base data-default nats numericpeano text
        ];
@@ -206883,8 +208459,8 @@ self: {
      }:
      mkDerivation {
        pname = "type-of-html";
-       version = "1.3.2.1";
-       sha256 = "1c7yj9fh9dxkif2f116cjjgz2prdz1a3xaqni5m9gmvy2y5gvbdn";
+       version = "1.3.3.0";
+       sha256 = "0q3r2imr63nv7l08w6q850xqak4gwzvk43qv1vq8x9qwdaf1nisv";
        libraryHaskellDepends = [
          base bytestring double-conversion ghc-prim text
        ];
@@ -207507,6 +209083,29 @@ self: {
        license = stdenv.lib.licenses.asl20;
      }) {};
 
+  "tzdata_0_1_20180122_0" = callPackage
+    ({ mkDerivation, base, bytestring, containers, deepseq, HUnit
+     , test-framework, test-framework-hunit, test-framework-th, unix
+     , vector
+     }:
+     mkDerivation {
+       pname = "tzdata";
+       version = "0.1.20180122.0";
+       sha256 = "17fv2jvmbplyaxw4jpq78kqws4cmwc53mlnnjw70vmagx52xh6x3";
+       enableSeparateDataOutput = true;
+       libraryHaskellDepends = [
+         base bytestring containers deepseq vector
+       ];
+       testHaskellDepends = [
+         base bytestring HUnit test-framework test-framework-hunit
+         test-framework-th unix
+       ];
+       homepage = "https://github.com/nilcons/haskell-tzdata";
+       description = "Time zone database (as files and as a module)";
+       license = stdenv.lib.licenses.asl20;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "u2f" = callPackage
     ({ mkDerivation, aeson, asn1-encoding, asn1-types, base
      , base64-bytestring, binary, bytestring, cryptohash, cryptonite
@@ -207681,9 +209280,7 @@ self: {
      }) {};
 
   "udev" = callPackage
-    ({ mkDerivation, base, bytestring, libudev, posix-paths, select
-     , unix
-     }:
+    ({ mkDerivation, base, bytestring, libudev, posix-paths, unix }:
      mkDerivation {
        pname = "udev";
        version = "0.1.0.0";
@@ -207692,7 +209289,6 @@ self: {
        isExecutable = true;
        libraryHaskellDepends = [ base bytestring posix-paths unix ];
        libraryPkgconfigDepends = [ libudev ];
-       executableHaskellDepends = [ base bytestring select ];
        homepage = "https://github.com/pxqr/udev";
        description = "libudev bindings";
        license = stdenv.lib.licenses.bsd3;
@@ -208300,6 +209896,22 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "unicode_0_0_1" = callPackage
+    ({ mkDerivation, base, containers, semigroups, utility-ht }:
+     mkDerivation {
+       pname = "unicode";
+       version = "0.0.1";
+       sha256 = "10cv8kk3c028bylkjz8jx0xhmkzrjbmhm1hhbdsyvszl9mfykga9";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [ base containers semigroups ];
+       testHaskellDepends = [ base containers utility-ht ];
+       homepage = "http://hub.darcs.net/thielema/unicode/";
+       description = "Construct and transform unicode characters";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "unicode-names" = callPackage
     ({ mkDerivation, array, base, containers, unicode-properties }:
      mkDerivation {
@@ -208584,38 +210196,40 @@ self: {
      }) {};
 
   "unique-logic" = callPackage
-    ({ mkDerivation, base, non-empty, QuickCheck, transformers
-     , utility-ht
+    ({ mkDerivation, base, explicit-exception, non-empty, QuickCheck
+     , semigroups, transformers, utility-ht
      }:
      mkDerivation {
        pname = "unique-logic";
-       version = "0.3";
-       sha256 = "0pjkqvam73d6xy528r9zf75km2yr997in902174raj6kw3kgdl41";
-       libraryHaskellDepends = [ base transformers utility-ht ];
+       version = "0.4";
+       sha256 = "0lza0g7mvij6fj07nfyrgl7vy6hpqmmmzbnxylq71jb4a90sn28j";
+       libraryHaskellDepends = [
+         base explicit-exception transformers utility-ht
+       ];
        testHaskellDepends = [
-         base non-empty QuickCheck transformers utility-ht
+         base non-empty QuickCheck semigroups transformers utility-ht
        ];
-       homepage = "http://code.haskell.org/~thielema/unique-logic/";
+       homepage = "http://hub.darcs.net/thielema/unique-logic/";
        description = "Solve simple simultaneous equations";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "unique-logic-tf" = callPackage
-    ({ mkDerivation, base, containers, explicit-exception, non-empty
-     , QuickCheck, transformers, utility-ht
+    ({ mkDerivation, base, containers, data-ref, non-empty, QuickCheck
+     , semigroups, transformers, utility-ht
      }:
      mkDerivation {
        pname = "unique-logic-tf";
-       version = "0.4.1.2";
-       sha256 = "1gdcp5fh5krhpcmzsbzkd8sk7y41cjdcfvv5zcaafw19pbrh81nh";
+       version = "0.5";
+       sha256 = "05v9ky3lrh4yzjsfgxa2sz44l7dlsvi5iv4h9rnsj2sd3hj2xcsa";
        libraryHaskellDepends = [
-         base containers explicit-exception transformers utility-ht
+         base containers data-ref semigroups transformers utility-ht
        ];
        testHaskellDepends = [
          base non-empty QuickCheck transformers utility-ht
        ];
-       homepage = "http://code.haskell.org/~thielema/unique-logic-tf/";
+       homepage = "http://hub.darcs.net/thielema/unique-logic-tf/";
        description = "Solve simple simultaneous equations";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -208956,22 +210570,21 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "universum_1_0_4_1" = callPackage
+  "universum_1_0_1" = callPackage
     ({ mkDerivation, base, bytestring, containers, criterion, deepseq
-     , doctest, ghc-prim, Glob, hashable, microlens, microlens-mtl, mtl
+     , ghc-prim, hashable, microlens, microlens-mtl, mtl
      , safe-exceptions, semigroups, stm, text, text-format, transformers
      , type-operators, unordered-containers, utf8-string, vector
      }:
      mkDerivation {
        pname = "universum";
-       version = "1.0.4.1";
-       sha256 = "1xsachyf52km3awrpqmqhlwncz55mbc29xjwvsci01vrd6swz9c0";
+       version = "1.0.1";
+       sha256 = "1pa8qnr9px5qfwhpxj15wnqaf5x063ih87mx78fcks95xaqf648k";
        libraryHaskellDepends = [
          base bytestring containers deepseq ghc-prim hashable microlens
          microlens-mtl mtl safe-exceptions stm text text-format transformers
          type-operators unordered-containers utf8-string vector
        ];
-       testHaskellDepends = [ base doctest Glob ];
        benchmarkHaskellDepends = [
          base containers criterion deepseq hashable mtl semigroups text
          unordered-containers
@@ -209020,7 +210633,7 @@ self: {
      }) {};
 
   "unix-fcntl" = callPackage
-    ({ mkDerivation, base, foreign-var, unix }:
+    ({ mkDerivation, base, foreign-var }:
      mkDerivation {
        pname = "unix-fcntl";
        version = "0.0.0";
@@ -209028,7 +210641,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base foreign-var ];
-       executableHaskellDepends = [ base foreign-var unix ];
        homepage = "https://github.com/maoe/unix-fcntl";
        description = "Comprehensive bindings to fcntl(2)";
        license = stdenv.lib.licenses.bsd3;
@@ -209263,6 +210875,31 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "unordered-containers_0_2_9_0" = callPackage
+    ({ mkDerivation, base, bytestring, ChasingBottoms, containers
+     , criterion, deepseq, deepseq-generics, hashable, hashmap, HUnit
+     , mtl, QuickCheck, random, test-framework, test-framework-hunit
+     , test-framework-quickcheck2
+     }:
+     mkDerivation {
+       pname = "unordered-containers";
+       version = "0.2.9.0";
+       sha256 = "0l4264p0av12cc6i8gls13q8y27x12z2ar4x34n3x59y99fcnc37";
+       libraryHaskellDepends = [ base deepseq hashable ];
+       testHaskellDepends = [
+         base ChasingBottoms containers hashable HUnit QuickCheck
+         test-framework test-framework-hunit test-framework-quickcheck2
+       ];
+       benchmarkHaskellDepends = [
+         base bytestring containers criterion deepseq deepseq-generics
+         hashable hashmap mtl random
+       ];
+       homepage = "https://github.com/tibbe/unordered-containers";
+       description = "Efficient hashing-based container types";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "unordered-containers-rematch" = callPackage
     ({ mkDerivation, base, hashable, hspec, HUnit, rematch
      , unordered-containers
@@ -209379,7 +211016,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base ];
-       executableHaskellDepends = [ base ];
        homepage = "http://github.com/konn/unsafely";
        description = "Flexible access control for unsafe operations and instances";
        license = stdenv.lib.licenses.bsd3;
@@ -210992,6 +212628,19 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "validity_0_4_0_4" = callPackage
+    ({ mkDerivation, base }:
+     mkDerivation {
+       pname = "validity";
+       version = "0.4.0.4";
+       sha256 = "1iva60sfaqnkwdk5b2w6skvsg6096x24bjyd5h057n9dlbimiblx";
+       libraryHaskellDepends = [ base ];
+       homepage = "https://github.com/NorfairKing/validity#readme";
+       description = "Validity typeclass";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "validity-aeson" = callPackage
     ({ mkDerivation, aeson, base, validity, validity-scientific
      , validity-text, validity-unordered-containers, validity-vector
@@ -211069,6 +212718,19 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "validity-text_0_2_0_1" = callPackage
+    ({ mkDerivation, base, bytestring, text, validity }:
+     mkDerivation {
+       pname = "validity-text";
+       version = "0.2.0.1";
+       sha256 = "1r96nn0y7hgm49y79kf3n86960z7gbz2mw4wcnsi9qlccnjq5qk4";
+       libraryHaskellDepends = [ base bytestring text validity ];
+       homepage = "https://github.com/NorfairKing/validity#readme";
+       description = "Validity instances for text";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "validity-time" = callPackage
     ({ mkDerivation, base, time, validity }:
      mkDerivation {
@@ -211284,6 +212946,23 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "vault_0_3_1_0" = callPackage
+    ({ mkDerivation, base, containers, hashable, semigroups
+     , unordered-containers
+     }:
+     mkDerivation {
+       pname = "vault";
+       version = "0.3.1.0";
+       sha256 = "17wp9i64k5ms4bqwjwqjj7llcbmyvgf81sah7w3zdqfsqd1shq6r";
+       libraryHaskellDepends = [
+         base containers hashable semigroups unordered-containers
+       ];
+       homepage = "https://github.com/HeinrichApfelmus/vault";
+       description = "a persistent store for values of arbitrary types";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "vault-tool" = callPackage
     ({ mkDerivation, aeson, base, bytestring, http-client
      , http-client-tls, http-types, text, unordered-containers
@@ -211529,6 +213208,7 @@ self: {
        homepage = "https://github.com/phadej/vec";
        description = "Vec: length-indexed (sized) list";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "vect" = callPackage
@@ -211619,8 +213299,8 @@ self: {
      }) {};
 
   "vector-algorithms" = callPackage
-    ({ mkDerivation, base, bytestring, containers, mtl, mwc-random
-     , primitive, QuickCheck, vector
+    ({ mkDerivation, base, bytestring, containers, primitive
+     , QuickCheck, vector
      }:
      mkDerivation {
        pname = "vector-algorithms";
@@ -211631,7 +213311,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base bytestring primitive vector ];
-       executableHaskellDepends = [ base mtl mwc-random vector ];
        testHaskellDepends = [
          base bytestring containers QuickCheck vector
        ];
@@ -211658,26 +213337,6 @@ self: {
      }:
      mkDerivation {
        pname = "vector-binary-instances";
-       version = "0.2.3.5";
-       sha256 = "0niad09lbxz3cj20qllyj92lwbc013ihw4lby8fv07x5xjx5a4p1";
-       revision = "1";
-       editedCabalFile = "0yk61mifvcc31vancsfsd0vskqh5k3a3znx1rbz8wzcs4ijjzh48";
-       libraryHaskellDepends = [ base binary vector ];
-       testHaskellDepends = [ base binary tasty tasty-quickcheck vector ];
-       benchmarkHaskellDepends = [
-         base binary bytestring criterion deepseq vector
-       ];
-       homepage = "https://github.com/bos/vector-binary-instances";
-       description = "Instances of Data.Binary and Data.Serialize for vector";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "vector-binary-instances_0_2_4" = callPackage
-    ({ mkDerivation, base, binary, bytestring, criterion, deepseq
-     , tasty, tasty-quickcheck, vector
-     }:
-     mkDerivation {
-       pname = "vector-binary-instances";
        version = "0.2.4";
        sha256 = "1y236jb72iab9ska1mc48z6yb0xgwmj45laaqdyjxksd84z7hbrb";
        libraryHaskellDepends = [ base binary vector ];
@@ -211688,7 +213347,6 @@ self: {
        homepage = "https://github.com/bos/vector-binary-instances";
        description = "Instances of Data.Binary and Data.Serialize for vector";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "vector-buffer" = callPackage
@@ -211737,8 +213395,8 @@ self: {
      }) {};
 
   "vector-bytestring" = callPackage
-    ({ mkDerivation, base, bytestring, criterion, deepseq, directory
-     , ghc-prim, primitive, QuickCheck, random, vector
+    ({ mkDerivation, base, bytestring, deepseq, directory, ghc-prim
+     , primitive, QuickCheck, random, vector
      }:
      mkDerivation {
        pname = "vector-bytestring";
@@ -211749,7 +213407,6 @@ self: {
        libraryHaskellDepends = [
          base bytestring deepseq ghc-prim primitive vector
        ];
-       executableHaskellDepends = [ base bytestring criterion deepseq ];
        testHaskellDepends = [ base directory QuickCheck random ];
        homepage = "https://github.com/basvandijk/vector-bytestring";
        description = "ByteStrings as type synonyms of Storable Vectors of Word8s";
@@ -211986,8 +213643,8 @@ self: {
        pname = "vector-space-points";
        version = "0.2.1.2";
        sha256 = "0jqiy7b3hy21c0imqxbzvcx0hxy33bh97bv47bpv099dx32d7spy";
-       revision = "2";
-       editedCabalFile = "0jnnzhwkc82flvaxqc1vv30d8vpdwnyi82614c34j79m51wcmvya";
+       revision = "3";
+       editedCabalFile = "07jrxmjw7yzrgkncam4axy3b3j5iha1d632kyd24n805b6p7vym3";
        libraryHaskellDepends = [ base vector-space ];
        description = "A type for points, as distinct from vectors";
        license = stdenv.lib.licenses.bsd3;
@@ -212160,7 +213817,6 @@ self: {
        libraryHaskellDepends = [
          aeson base containers text unordered-containers vector verdict
        ];
-       executableHaskellDepends = [ aeson base containers verdict ];
        testHaskellDepends = [
          aeson base containers hspec unordered-containers vector verdict
        ];
@@ -212304,6 +213960,7 @@ self: {
        ];
        homepage = "https://github.com/andrewthad/vicinity#readme";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "viewprof" = callPackage
@@ -212948,6 +214605,42 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "vty_5_20" = callPackage
+    ({ mkDerivation, base, blaze-builder, bytestring, Cabal, containers
+     , deepseq, directory, filepath, hashable, HUnit, microlens
+     , microlens-mtl, microlens-th, mtl, parallel, parsec, QuickCheck
+     , quickcheck-assertions, random, smallcheck, stm, string-qq
+     , terminfo, test-framework, test-framework-hunit
+     , test-framework-smallcheck, text, transformers, unix, utf8-string
+     , vector
+     }:
+     mkDerivation {
+       pname = "vty";
+       version = "5.20";
+       sha256 = "0l9xlk4z8xlkd7qzhzkj4l0qb2gwl27mabr2hhkpz3yfv7z6j0a3";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         base blaze-builder bytestring containers deepseq directory filepath
+         hashable microlens microlens-mtl microlens-th mtl parallel parsec
+         stm terminfo text transformers unix utf8-string vector
+       ];
+       executableHaskellDepends = [
+         base containers microlens microlens-mtl mtl
+       ];
+       testHaskellDepends = [
+         base blaze-builder bytestring Cabal containers deepseq HUnit
+         microlens microlens-mtl mtl QuickCheck quickcheck-assertions random
+         smallcheck stm string-qq terminfo test-framework
+         test-framework-hunit test-framework-smallcheck text unix
+         utf8-string vector
+       ];
+       homepage = "https://github.com/jtdaugherty/vty";
+       description = "A simple terminal UI library";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "vty-examples" = callPackage
     ({ mkDerivation, array, base, bytestring, Cabal, containers
      , data-default, deepseq, lens, mtl, parallel, parsec, QuickCheck
@@ -212985,9 +214678,9 @@ self: {
      }) {};
 
   "vty-ui" = callPackage
-    ({ mkDerivation, array, base, bytestring, containers, data-default
-     , directory, filepath, mtl, QuickCheck, random, regex-base, stm
-     , text, time, unix, vector, vty
+    ({ mkDerivation, array, base, containers, data-default, directory
+     , filepath, mtl, QuickCheck, random, regex-base, stm, text, unix
+     , vector, vty
      }:
      mkDerivation {
        pname = "vty-ui";
@@ -213000,9 +214693,7 @@ self: {
          array base containers data-default directory filepath mtl
          regex-base stm text unix vector vty
        ];
-       executableHaskellDepends = [
-         base bytestring mtl QuickCheck random text time vty
-       ];
+       executableHaskellDepends = [ base QuickCheck random text vty ];
        homepage = "http://jtdaugherty.github.com/vty-ui/";
        description = "An interactive terminal user interface library for Vty";
        license = stdenv.lib.licenses.bsd3;
@@ -213157,8 +214848,8 @@ self: {
      }:
      mkDerivation {
        pname = "wai-app-file-cgi";
-       version = "3.1.3";
-       sha256 = "0fxgan4r10rvq2mwh7d66shxmxmyqs7z824f3s0yzyl4gysivkkg";
+       version = "3.1.4";
+       sha256 = "1gcrfcvll4lpd8qrpcai00cn2zs8ql46z1chlqkbi7jk31r14qy0";
        libraryHaskellDepends = [
          array attoparsec attoparsec-conduit base blaze-builder blaze-html
          bytestring case-insensitive conduit conduit-extra containers
@@ -213879,8 +215570,7 @@ self: {
     ({ mkDerivation, async, base, base-prelude, bytestring, conduit
      , conduit-extra, consul-haskell, enclosed-exceptions, http-client
      , http-types, monad-control, monad-logger, network, process
-     , resourcet, text, transformers, void, wai, wai-app-static
-     , wai-conduit, wai-extra, warp
+     , resourcet, text, transformers, void, wai, wai-conduit
      }:
      mkDerivation {
        pname = "wai-middleware-consul";
@@ -213894,10 +215584,6 @@ self: {
          monad-control monad-logger network process resourcet text
          transformers void wai wai-conduit
        ];
-       executableHaskellDepends = [
-         async base base-prelude monad-logger transformers wai
-         wai-app-static wai-extra warp
-       ];
        homepage = "https://github.com/fpco/wai-middleware-consul";
        description = "Wai Middleware for Consul";
        license = stdenv.lib.licenses.mit;
@@ -214054,9 +215740,6 @@ self: {
          cryptohash http-client http-types mtl old-locale time transformers
          word8
        ];
-       executableHaskellDepends = [
-         base bytestring http-client transformers
-       ];
        description = "WAI HMAC Authentication Middleware Client";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -214150,8 +215833,8 @@ self: {
      }:
      mkDerivation {
        pname = "wai-middleware-rollbar";
-       version = "0.8.2";
-       sha256 = "08bzikcfgrni328mmxwxsr4kbsc5bjjacbxm18hs74b8n4g5f1qd";
+       version = "0.8.3";
+       sha256 = "17ys7ddpfa0sbjh79k240zqk2v7nlh0v7hrgr7kanal3pk7mvwvm";
        libraryHaskellDepends = [
          aeson base bytestring case-insensitive hostname http-client
          http-conduit http-types network text time unordered-containers uuid
@@ -214166,24 +215849,17 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "wai-middleware-rollbar_0_8_3" = callPackage
-    ({ mkDerivation, aeson, base, bytestring, case-insensitive
-     , containers, hostname, hspec, hspec-golden-aeson, http-client
-     , http-conduit, http-types, lens, lens-aeson, network, QuickCheck
-     , text, time, unordered-containers, uuid, wai
+  "wai-middleware-rollbar_0_10_0" = callPackage
+    ({ mkDerivation, aeson, base, bytestring, hostname, http-client
+     , http-conduit, http-types, rollbar-hs, text, time, uuid, wai
      }:
      mkDerivation {
        pname = "wai-middleware-rollbar";
-       version = "0.8.3";
-       sha256 = "17ys7ddpfa0sbjh79k240zqk2v7nlh0v7hrgr7kanal3pk7mvwvm";
+       version = "0.10.0";
+       sha256 = "1905cgmcgmsy0v2c84q33aharlklffqxhr6bwr1zvi138c9bivd6";
        libraryHaskellDepends = [
-         aeson base bytestring case-insensitive hostname http-client
-         http-conduit http-types network text time unordered-containers uuid
-         wai
-       ];
-       testHaskellDepends = [
-         aeson base bytestring case-insensitive containers hspec
-         hspec-golden-aeson lens lens-aeson QuickCheck text
+         aeson base bytestring hostname http-client http-conduit http-types
+         rollbar-hs text time uuid wai
        ];
        homepage = "https://github.com/joneshf/wai-middleware-rollbar#readme";
        description = "Middleware that communicates to Rollbar";
@@ -214298,9 +215974,8 @@ self: {
 
   "wai-middleware-verbs" = callPackage
     ({ mkDerivation, base, errors, exceptions, hashable, http-types
-     , mmorph, monad-logger, mtl, resourcet, text, transformers
+     , mmorph, monad-logger, mtl, resourcet, transformers
      , transformers-base, unordered-containers, wai
-     , wai-middleware-content-type, wai-transformers, warp
      }:
      mkDerivation {
        pname = "wai-middleware-verbs";
@@ -214312,11 +215987,6 @@ self: {
          base errors exceptions hashable http-types mmorph monad-logger mtl
          resourcet transformers transformers-base unordered-containers wai
        ];
-       executableHaskellDepends = [
-         base errors exceptions hashable http-types mmorph monad-logger mtl
-         resourcet text transformers transformers-base unordered-containers
-         wai wai-middleware-content-type wai-transformers warp
-       ];
        description = "Route different middleware responses based on the incoming HTTP verb";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -214774,7 +216444,7 @@ self: {
   "waitra" = callPackage
     ({ mkDerivation, aeson, base, bytestring, directory, filepath
      , http-types, regex-applicative, tasty, tasty-hunit
-     , template-haskell, text, wai, wai-app-static, wai-extra, warp
+     , template-haskell, text, wai, wai-extra
      }:
      mkDerivation {
        pname = "waitra";
@@ -214788,7 +216458,6 @@ self: {
          aeson base bytestring directory filepath http-types
          regex-applicative template-haskell text wai
        ];
-       executableHaskellDepends = [ aeson base wai wai-app-static warp ];
        testHaskellDepends = [
          aeson base http-types tasty tasty-hunit wai wai-extra
        ];
@@ -214919,7 +216588,7 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "warp_3_2_15" = callPackage
+  "warp_3_2_17" = callPackage
     ({ mkDerivation, array, async, auto-update, base, blaze-builder
      , bytestring, case-insensitive, containers, directory, doctest
      , gauge, ghc-prim, hashable, hspec, http-client, http-date
@@ -214929,8 +216598,8 @@ self: {
      }:
      mkDerivation {
        pname = "warp";
-       version = "3.2.15";
-       sha256 = "10l2qk4qn6vf898fp4ahdyhn49f8zjhlczxv0d93wkc695m59his";
+       version = "3.2.17";
+       sha256 = "1frdwc7icadizbwlp0b1gxq95h9a6ds9cdq9rzqqsn4yq2jcbirb";
        libraryHaskellDepends = [
          array async auto-update base blaze-builder bytestring
          case-insensitive containers ghc-prim hashable http-date http-types
@@ -215012,10 +216681,28 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "warp-tls_3_2_4_2" = callPackage
+    ({ mkDerivation, base, bytestring, cryptonite, data-default-class
+     , network, streaming-commons, tls, tls-session-manager, wai, warp
+     }:
+     mkDerivation {
+       pname = "warp-tls";
+       version = "3.2.4.2";
+       sha256 = "08g74490mpaghrvkb5z6pa6b6bby1a83js52pg5jlm9b5zfwcj2w";
+       libraryHaskellDepends = [
+         base bytestring cryptonite data-default-class network
+         streaming-commons tls tls-session-manager wai warp
+       ];
+       homepage = "http://github.com/yesodweb/wai";
+       description = "HTTP over TLS support for Warp via the TLS package";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "warp-tls-uid" = callPackage
     ({ mkDerivation, base, bytestring, certificate, conduit
-     , crypto-random, http-types, network, network-conduit, pem, tls
-     , tls-extra, unix, wai, warp
+     , crypto-random, network, network-conduit, pem, tls, tls-extra
+     , unix, wai, warp
      }:
      mkDerivation {
        pname = "warp-tls-uid";
@@ -215027,15 +216714,32 @@ self: {
          base bytestring certificate conduit crypto-random network
          network-conduit pem tls tls-extra unix wai warp
        ];
-       executableHaskellDepends = [
-         base bytestring certificate conduit crypto-random http-types
-         network network-conduit pem tls tls-extra unix wai warp
-       ];
        description = "set group and user id before running server";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "warped" = callPackage
+    ({ mkDerivation, aeson, base, blaze-builder, conduit, http-types
+     , lifted-async, monad-control, preamble, shakers, uuid, wai
+     , wai-conduit, wai-cors, warp
+     }:
+     mkDerivation {
+       pname = "warped";
+       version = "0.0.3";
+       sha256 = "11iw5shjclns2d8baj98scm4jc773fxyzbjwbvvs6scan9d31z7m";
+       isLibrary = true;
+       isExecutable = true;
+       libraryHaskellDepends = [
+         aeson base blaze-builder conduit http-types lifted-async
+         monad-control preamble uuid wai wai-conduit wai-cors warp
+       ];
+       executableHaskellDepends = [ base shakers ];
+       homepage = "https://github.com/swift-nav/warped";
+       description = "Warp and Wai Library";
+       license = stdenv.lib.licenses.mit;
+     }) {};
+
   "watchdog" = callPackage
     ({ mkDerivation, base, mtl, time }:
      mkDerivation {
@@ -215206,9 +216910,7 @@ self: {
      }) {};
 
   "wcwidth" = callPackage
-    ({ mkDerivation, attoparsec, base, bytestring, containers
-     , setlocale, utf8-string
-     }:
+    ({ mkDerivation, base, containers }:
      mkDerivation {
        pname = "wcwidth";
        version = "0.0.2";
@@ -215216,9 +216918,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base containers ];
-       executableHaskellDepends = [
-         attoparsec base bytestring containers setlocale utf8-string
-       ];
        homepage = "http://github.com/solidsnack/wcwidth/";
        description = "Native wcwidth";
        license = stdenv.lib.licenses.bsd3;
@@ -215425,27 +217124,6 @@ self: {
      }:
      mkDerivation {
        pname = "web-routes";
-       version = "0.27.13";
-       sha256 = "10b0hs7mmvs9ay3ik93s8xd7zlx8pyz20626nrha4mwyixgkmc59";
-       revision = "1";
-       editedCabalFile = "1s8ax7r8l0484730p36c3gn3n28zhl2p1nwjnprsbhcxd83yq4dh";
-       libraryHaskellDepends = [
-         base blaze-builder bytestring exceptions ghc-prim http-types mtl
-         parsec split text utf8-string
-       ];
-       testHaskellDepends = [ base hspec HUnit QuickCheck text ];
-       homepage = "http://www.happstack.com/docs/crashcourse/index.html#web-routes";
-       description = "portable, type-safe URL routing";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "web-routes_0_27_14" = callPackage
-    ({ mkDerivation, base, blaze-builder, bytestring, exceptions
-     , ghc-prim, hspec, http-types, HUnit, mtl, parsec, QuickCheck
-     , split, text, utf8-string
-     }:
-     mkDerivation {
-       pname = "web-routes";
        version = "0.27.14";
        sha256 = "1m5ywqy2c9v478ybyrzqc407zdqcg18p5587mrq34v7bnjk27rak";
        revision = "1";
@@ -215458,7 +217136,6 @@ self: {
        homepage = "http://www.happstack.com/docs/crashcourse/index.html#web-routes";
        description = "portable, type-safe URL routing";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "web-routes-boomerang" = callPackage
@@ -215573,21 +217250,6 @@ self: {
      }:
      mkDerivation {
        pname = "web-routes-wai";
-       version = "0.24.3";
-       sha256 = "070gldklv52gpvas676nw9igr4d3cd1f23prlmd2qjrjn3qvhdq7";
-       libraryHaskellDepends = [
-         base bytestring http-types text wai web-routes
-       ];
-       description = "Library for maintaining correctness of URLs within an application";
-       license = stdenv.lib.licenses.bsd3;
-     }) {};
-
-  "web-routes-wai_0_24_3_1" = callPackage
-    ({ mkDerivation, base, bytestring, http-types, text, wai
-     , web-routes
-     }:
-     mkDerivation {
-       pname = "web-routes-wai";
        version = "0.24.3.1";
        sha256 = "0j9h22nsj7zf5qpf4i07jdcih00r2fivdilvj8wsylk4d23x27wf";
        libraryHaskellDepends = [
@@ -215595,7 +217257,6 @@ self: {
        ];
        description = "Library for maintaining correctness of URLs within an application";
        license = stdenv.lib.licenses.bsd3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "web-routing" = callPackage
@@ -216069,10 +217730,6 @@ self: {
          case-insensitive containers entropy network random SHA
          streaming-commons text
        ];
-       executableHaskellDepends = [
-         attoparsec base base64-bytestring binary blaze-builder bytestring
-         case-insensitive containers entropy network random SHA text
-       ];
        testHaskellDepends = [
          attoparsec base base64-bytestring binary blaze-builder bytestring
          case-insensitive containers entropy HUnit network QuickCheck random
@@ -216092,7 +217749,7 @@ self: {
 
   "websockets-rpc" = callPackage
     ({ mkDerivation, aeson, async, base, bytestring, containers
-     , exceptions, hashable, monad-control, MonadRandom, mtl, QuickCheck
+     , exceptions, hashable, monad-control, mtl, QuickCheck
      , quickcheck-instances, stm, tasty, tasty-quickcheck, text
      , transformers, unordered-containers, uuid, wai-transformers
      , websockets, websockets-simple
@@ -216109,10 +217766,6 @@ self: {
          unordered-containers uuid wai-transformers websockets
          websockets-simple
        ];
-       executableHaskellDepends = [
-         aeson async base exceptions MonadRandom mtl wai-transformers
-         websockets websockets-simple
-       ];
        testHaskellDepends = [
          aeson base QuickCheck quickcheck-instances tasty tasty-quickcheck
        ];
@@ -216230,9 +217883,8 @@ self: {
      }) {};
 
   "weigh" = callPackage
-    ({ mkDerivation, base, bytestring-trie, containers, deepseq, mtl
-     , process, random, split, template-haskell, temporary
-     , unordered-containers
+    ({ mkDerivation, base, deepseq, mtl, process, split
+     , template-haskell, temporary
      }:
      mkDerivation {
        pname = "weigh";
@@ -216241,9 +217893,7 @@ self: {
        libraryHaskellDepends = [
          base deepseq mtl process split template-haskell temporary
        ];
-       testHaskellDepends = [
-         base bytestring-trie containers deepseq random unordered-containers
-       ];
+       testHaskellDepends = [ base deepseq ];
        homepage = "https://github.com/fpco/weigh#readme";
        description = "Measure allocations of a Haskell functions/values";
        license = stdenv.lib.licenses.bsd3;
@@ -216664,14 +218314,14 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
-  "wild-bind-x11_0_2_0_0" = callPackage
+  "wild-bind-x11_0_2_0_1" = callPackage
     ({ mkDerivation, async, base, containers, fold-debounce, hspec, mtl
      , semigroups, stm, text, time, transformers, wild-bind, X11
      }:
      mkDerivation {
        pname = "wild-bind-x11";
-       version = "0.2.0.0";
-       sha256 = "0x7zy76x9zmh6pjv6yhkb53l6pkn4wh76x34adx538fyf6a8mk6b";
+       version = "0.2.0.1";
+       sha256 = "0g02kv710yr8qzh48dcwzyn1aak9hz3ny2pq7v24g40kc7c6pd4d";
        libraryHaskellDepends = [
          base containers fold-debounce mtl semigroups stm text transformers
          wild-bind X11
@@ -216874,23 +218524,6 @@ self: {
      }:
      mkDerivation {
        pname = "withdependencies";
-       version = "0.2.4.1";
-       sha256 = "16mxhm0as0598z4w4rhfqxbnasjnzlzsb5nj12b7m8hdg5cg3x6a";
-       libraryHaskellDepends = [
-         base conduit containers mtl profunctors
-       ];
-       testHaskellDepends = [ base conduit hspec HUnit mtl ];
-       homepage = "https://github.com/bartavelle/withdependencies";
-       description = "Run computations that depend on one or more elements in a stream";
-       license = stdenv.lib.licenses.gpl3;
-     }) {};
-
-  "withdependencies_0_2_4_2" = callPackage
-    ({ mkDerivation, base, conduit, containers, hspec, HUnit, mtl
-     , profunctors
-     }:
-     mkDerivation {
-       pname = "withdependencies";
        version = "0.2.4.2";
        sha256 = "04pk5giqlnls1p62fz9p0sb1288c9qk3ivsq2kb5207cjifyslgz";
        libraryHaskellDepends = [
@@ -216900,7 +218533,6 @@ self: {
        homepage = "https://github.com/bartavelle/withdependencies";
        description = "Run computations that depend on one or more elements in a stream";
        license = stdenv.lib.licenses.gpl3;
-       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "witherable" = callPackage
@@ -217191,8 +218823,8 @@ self: {
      }:
      mkDerivation {
        pname = "wolf";
-       version = "0.3.41";
-       sha256 = "06w55qgsp2jvic8f70rr7dl4shqx64hiqr15vk104vvf7xiy2asr";
+       version = "0.3.42";
+       sha256 = "078pzdwhdxgqd5lszwszzcwxla17a51ikcvvas6791lvwx1ddg0d";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -217543,18 +219175,13 @@ self: {
      }) {};
 
   "workflow-windows" = callPackage
-    ({ mkDerivation, base, c-storable-deriving, doctest, free, hspec
-     , QuickCheck, StateVar, transformers, workflow-types
-     }:
+    ({ mkDerivation, base, doctest, hspec, QuickCheck }:
      mkDerivation {
        pname = "workflow-windows";
        version = "0.0.0";
        sha256 = "14pzzm7c17sg76lmxjaw0d5avgpafgj4q66diqmh502mx8k2z4jc";
        isLibrary = true;
        isExecutable = true;
-       libraryHaskellDepends = [
-         base c-storable-deriving free StateVar transformers workflow-types
-       ];
        executableHaskellDepends = [ base ];
        testHaskellDepends = [ base doctest hspec QuickCheck ];
        homepage = "http://github.com/sboosali/workflow-windows#readme";
@@ -218081,6 +219708,7 @@ self: {
        homepage = "https://github.com/MarcFontaine/wsjtx-udp";
        description = "WSJT-X UDP protocol";
        license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
   "wtk" = callPackage
@@ -218814,8 +220442,6 @@ self: {
        libraryHaskellDepends = [ base glib ];
        libraryPkgconfigDepends = [ libxfconf ];
        libraryToolDepends = [ gtk2hs-buildtools ];
-       executablePkgconfigDepends = [ libxfconf ];
-       executableToolDepends = [ gtk2hs-buildtools ];
        homepage = "http://patch-tag.com/r/obbele/xfconf/home";
        description = "FFI bindings to xfconf";
        license = stdenv.lib.licenses.gpl3;
@@ -219066,7 +220692,7 @@ self: {
      }) {};
 
   "xleb" = callPackage
-    ({ mkDerivation, base, containers, mtl, pretty-show, xml }:
+    ({ mkDerivation, base, containers, mtl, xml }:
      mkDerivation {
        pname = "xleb";
        version = "0.1.0";
@@ -219076,7 +220702,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base containers mtl xml ];
-       executableHaskellDepends = [ base pretty-show xml ];
        homepage = "https://github.com/aisamanra/xleb";
        description = "A simple monadic language for parsing XML structures";
        license = stdenv.lib.licenses.bsd3;
@@ -219088,8 +220713,8 @@ self: {
      }:
      mkDerivation {
        pname = "xls";
-       version = "0.1.0";
-       sha256 = "1w23dqrzc532vgzsmjkks1hm1r0i4jnj1bfxak9c71j9svna50n5";
+       version = "0.1.1";
+       sha256 = "0a09zw90xiaklr68w932md38s95jzwid914lw7frnf3qd8j12xq9";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [
@@ -219268,6 +220893,23 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "xml-basic_0_1_3" = callPackage
+    ({ mkDerivation, base, containers, data-accessor
+     , explicit-exception, semigroups, utility-ht
+     }:
+     mkDerivation {
+       pname = "xml-basic";
+       version = "0.1.3";
+       sha256 = "0ma3bjjsvijknmdnywfk5ch9v5pymxbmkwgzzq58iiv26hkd3n4q";
+       libraryHaskellDepends = [
+         base containers data-accessor explicit-exception semigroups
+         utility-ht
+       ];
+       description = "Basics for XML/HTML representation and processing";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "xml-catalog" = callPackage
     ({ mkDerivation, base, bytestring, conduit, containers, text
      , transformers, uri-conduit, xml-conduit
@@ -219358,8 +221000,8 @@ self: {
 
   "xml-conduit-parse" = callPackage
     ({ mkDerivation, base, conduit, conduit-parse, containers
-     , data-default, exceptions, hlint, parsers, resourcet, tasty
-     , tasty-hunit, text, xml-conduit, xml-types
+     , data-default, exceptions, parsers, resourcet, tasty, tasty-hunit
+     , text, xml-conduit, xml-types
      }:
      mkDerivation {
        pname = "xml-conduit-parse";
@@ -219370,8 +221012,8 @@ self: {
          xml-conduit xml-types
        ];
        testHaskellDepends = [
-         base conduit conduit-parse data-default hlint parsers resourcet
-         tasty tasty-hunit
+         base conduit conduit-parse data-default parsers resourcet tasty
+         tasty-hunit
        ];
        homepage = "https://github.com/k0ral/xml-conduit-parse";
        description = "Streaming XML parser based on conduits";
@@ -220300,7 +221942,6 @@ self: {
          base composition-prelude containers process transformers X11 xmonad
          xmonad-contrib
        ];
-       executableHaskellDepends = [ base ];
        testHaskellDepends = [ base hspec xmonad ];
        homepage = "https://hub.darcs.net/vmchale/xmonad-vanessa";
        description = "Custom xmonad, which builds with stack or cabal";
@@ -220953,8 +222594,8 @@ self: {
      }:
      mkDerivation {
        pname = "yaml-combinators";
-       version = "1.1";
-       sha256 = "045zi5lipnjw161xz2awr5zwnzhiszsrrpwin64q4r5pxjkh7ala";
+       version = "1.1.1";
+       sha256 = "0zrvg0ccqn20gj8bbnc3xnlmbvf226qq7synx3q962cw95l53cyl";
        libraryHaskellDepends = [
          aeson base bytestring generics-sop scientific text transformers
          unordered-containers vector yaml
@@ -221136,7 +222777,7 @@ self: {
      }) {};
 
   "yampa-canvas" = callPackage
-    ({ mkDerivation, base, blank-canvas, stm, text, time, Yampa }:
+    ({ mkDerivation, base, blank-canvas, stm, time, Yampa }:
      mkDerivation {
        pname = "yampa-canvas";
        version = "0.2.2";
@@ -221146,7 +222787,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base blank-canvas stm time Yampa ];
-       executableHaskellDepends = [ base blank-canvas text Yampa ];
        description = "blank-canvas frontend for Yampa";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -221173,7 +222813,7 @@ self: {
 
   "yampa-glut" = callPackage
     ({ mkDerivation, base, GLUT, newtype, OpenGL, vector-space
-     , vector-space-opengl, Yampa-core
+     , Yampa-core
      }:
      mkDerivation {
        pname = "yampa-glut";
@@ -221184,16 +222824,32 @@ self: {
        libraryHaskellDepends = [
          base GLUT newtype OpenGL vector-space Yampa-core
        ];
-       executableHaskellDepends = [
-         base GLUT newtype OpenGL vector-space vector-space-opengl
-         Yampa-core
-       ];
        homepage = "https://github.com/ony/yampa-glut";
        description = "Connects Yampa and GLUT";
        license = stdenv.lib.licenses.gpl3;
        hydraPlatforms = stdenv.lib.platforms.none;
      }) {};
 
+  "yampa-sdl2" = callPackage
+    ({ mkDerivation, base, colour, linear, sdl2, sdl2-gfx, StateVar
+     , text, Yampa
+     }:
+     mkDerivation {
+       pname = "yampa-sdl2";
+       version = "0.0.1.1";
+       sha256 = "0p162kaznv4mk8x3zvkb7vnjwsqn8gydblpxijqsjgzc3qbi5mwq";
+       libraryHaskellDepends = [
+         base colour linear sdl2 sdl2-gfx StateVar text Yampa
+       ];
+       testHaskellDepends = [
+         base colour linear sdl2 sdl2-gfx StateVar text Yampa
+       ];
+       homepage = "https://github.com/Simre1/YampaSDL2#readme";
+       description = "Yampa and SDL2 made easy";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "yampa2048" = callPackage
     ({ mkDerivation, base, gloss, random, Yampa }:
      mkDerivation {
@@ -221211,8 +222867,8 @@ self: {
 
   "yandex-translate" = callPackage
     ({ mkDerivation, aeson, base, bytestring, data-default-class
-     , exceptions, hspec, hspec-core, lens, lens-aeson, text
-     , transformers, unordered-containers, wreq
+     , exceptions, lens, lens-aeson, text, transformers
+     , unordered-containers, wreq
      }:
      mkDerivation {
        pname = "yandex-translate";
@@ -221222,9 +222878,6 @@ self: {
          aeson base bytestring data-default-class exceptions lens lens-aeson
          text transformers unordered-containers wreq
        ];
-       testHaskellDepends = [
-         base data-default-class hspec hspec-core lens text transformers
-       ];
        description = "Bindings to Yandex translate API";
        license = stdenv.lib.licenses.mit;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -221643,7 +223296,7 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "yesod-auth_1_6_0" = callPackage
+  "yesod-auth_1_6_1" = callPackage
     ({ mkDerivation, aeson, authenticate, base, base16-bytestring
      , base64-bytestring, binary, blaze-builder, blaze-html
      , blaze-markup, byteable, bytestring, conduit, conduit-extra
@@ -221656,8 +223309,8 @@ self: {
      }:
      mkDerivation {
        pname = "yesod-auth";
-       version = "1.6.0";
-       sha256 = "1whjf9hddlv2rymy5frgck6pb9l408lywdnnylnzmkrvrpvlm2nh";
+       version = "1.6.1";
+       sha256 = "09mp8kb2b1wz28ks1zc3chfm7qs5k6cp1aw84p03vrdi1rj1841i";
        libraryHaskellDepends = [
          aeson authenticate base base16-bytestring base64-bytestring binary
          blaze-builder blaze-html blaze-markup byteable bytestring conduit
@@ -221971,11 +223624,10 @@ self: {
      }) {};
 
   "yesod-auth-oauth2" = callPackage
-    ({ mkDerivation, aeson, authenticate, base, bytestring, containers
-     , hoauth2, hspec, http-client, http-conduit, http-types
-     , lifted-base, load-env, microlens, network-uri, random, text
-     , transformers, uri-bytestring, vector, warp, yesod, yesod-auth
-     , yesod-core, yesod-form
+    ({ mkDerivation, aeson, authenticate, base, bytestring, hoauth2
+     , hspec, http-client, http-conduit, http-types, lifted-base
+     , microlens, network-uri, random, text, transformers
+     , uri-bytestring, vector, yesod-auth, yesod-core, yesod-form
      }:
      mkDerivation {
        pname = "yesod-auth-oauth2";
@@ -221988,9 +223640,6 @@ self: {
          http-types lifted-base microlens network-uri random text
          transformers uri-bytestring vector yesod-auth yesod-core yesod-form
        ];
-       executableHaskellDepends = [
-         base containers http-conduit load-env text warp yesod yesod-auth
-       ];
        testHaskellDepends = [ base hspec uri-bytestring ];
        homepage = "http://github.com/thoughtbot/yesod-auth-oauth2";
        description = "OAuth 2.0 authentication plugins";
@@ -222257,7 +223906,7 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "yesod-core_1_6_0" = callPackage
+  "yesod-core_1_6_1" = callPackage
     ({ mkDerivation, aeson, async, auto-update, base, blaze-html
      , blaze-markup, byteable, bytestring, case-insensitive, cereal
      , clientsession, conduit, conduit-extra, containers, cookie
@@ -222271,8 +223920,8 @@ self: {
      }:
      mkDerivation {
        pname = "yesod-core";
-       version = "1.6.0";
-       sha256 = "0xhg4kjskjpwffnfykhszqyhg9d785r5pnziklswdi6g0qy0zv4z";
+       version = "1.6.1";
+       sha256 = "1dymck6s9a1cfpp6ib2smxhb4axklj4r08m10z4zqc05s63ch81r";
        libraryHaskellDepends = [
          aeson auto-update base blaze-html blaze-markup byteable bytestring
          case-insensitive cereal clientsession conduit conduit-extra
@@ -222578,7 +224227,7 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "yesod-form_1_6_0" = callPackage
+  "yesod-form_1_6_1" = callPackage
     ({ mkDerivation, aeson, attoparsec, base, blaze-builder, blaze-html
      , blaze-markup, byteable, bytestring, containers, data-default
      , email-validate, hspec, network-uri, persistent, resourcet
@@ -222587,8 +224236,8 @@ self: {
      }:
      mkDerivation {
        pname = "yesod-form";
-       version = "1.6.0";
-       sha256 = "0vvj56pjfaqn7lys8gbb8p7bgnbi67l9a5786gqc3jc1q0b50x8n";
+       version = "1.6.1";
+       sha256 = "05pnsgnhcsq74w91r74p8psh567yxbmyhddj04mnrfzlzzm19zxq";
        libraryHaskellDepends = [
          aeson attoparsec base blaze-builder blaze-html blaze-markup
          byteable bytestring containers data-default email-validate
@@ -222665,6 +224314,24 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
+  "yesod-gitrepo_0_3_0" = callPackage
+    ({ mkDerivation, base, directory, http-types, process, temporary
+     , text, unliftio, wai, yesod-core
+     }:
+     mkDerivation {
+       pname = "yesod-gitrepo";
+       version = "0.3.0";
+       sha256 = "07lqhih9jcb5rdjdkjsrg7s9l5f3y9lrsxa1rc1c8gxw0v2nfg5h";
+       libraryHaskellDepends = [
+         base directory http-types process temporary text unliftio wai
+         yesod-core
+       ];
+       homepage = "https://github.com/snoyberg/yesod-gitrepo#readme";
+       description = "Host content provided by a Git repo";
+       license = stdenv.lib.licenses.mit;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "yesod-gitrev" = callPackage
     ({ mkDerivation, aeson, base, gitrev, template-haskell, yesod-core
      }:
@@ -222718,11 +224385,9 @@ self: {
      }) {};
 
   "yesod-job-queue" = callPackage
-    ({ mkDerivation, aeson, api-field-json-th, base, bytestring
-     , classy-prelude-yesod, cron, file-embed, hedis, lens
-     , monad-control, monad-logger, persistent-sqlite, resourcet, stm
-     , text, time, transformers, uuid, yesod, yesod-core
-     , yesod-persistent
+    ({ mkDerivation, aeson, api-field-json-th, base, bytestring, cron
+     , file-embed, hedis, lens, monad-control, monad-logger, stm, text
+     , time, transformers, uuid, yesod, yesod-core, yesod-persistent
      }:
      mkDerivation {
        pname = "yesod-job-queue";
@@ -222735,10 +224400,6 @@ self: {
          monad-control monad-logger stm text time transformers uuid yesod
          yesod-core yesod-persistent
        ];
-       executableHaskellDepends = [
-         base classy-prelude-yesod hedis monad-logger persistent-sqlite
-         resourcet yesod yesod-core
-       ];
        testHaskellDepends = [ base ];
        homepage = "https://github.com/nakaji-dayo/yesod-job-queue#readme";
        description = "Background jobs library for Yesod";
@@ -222783,14 +224444,9 @@ self: {
      }) {};
 
   "yesod-mangopay" = callPackage
-    ({ mkDerivation, aeson, base, bytestring, conduit, conduit-extra
-     , containers, country-codes, data-default, directory, fast-logger
-     , hamlet, hjsmin, http-conduit, http-types, lifted-base, mangopay
-     , monad-control, monad-logger, persistent, persistent-postgresql
-     , persistent-template, resourcet, shakespeare, template-haskell
-     , text, time, wai, wai-extra, wai-logger, warp, yaml, yesod
-     , yesod-auth, yesod-core, yesod-form, yesod-persistent
-     , yesod-static
+    ({ mkDerivation, base, containers, http-conduit, http-types
+     , lifted-base, mangopay, persistent-template, text, time, yesod
+     , yesod-core
      }:
      mkDerivation {
        pname = "yesod-mangopay";
@@ -222802,15 +224458,6 @@ self: {
          base containers http-conduit http-types lifted-base mangopay
          persistent-template text time yesod yesod-core
        ];
-       executableHaskellDepends = [
-         aeson base bytestring conduit conduit-extra containers
-         country-codes data-default directory fast-logger hamlet hjsmin
-         http-conduit lifted-base mangopay monad-control monad-logger
-         persistent persistent-postgresql persistent-template resourcet
-         shakespeare template-haskell text time wai wai-extra wai-logger
-         warp yaml yesod yesod-auth yesod-core yesod-form yesod-persistent
-         yesod-static
-       ];
        homepage = "https://github.com/prowdsponsor/mangopay";
        description = "Yesod library for MangoPay API access";
        license = stdenv.lib.licenses.bsd3;
@@ -222819,16 +224466,16 @@ self: {
 
   "yesod-markdown" = callPackage
     ({ mkDerivation, base, blaze-html, blaze-markup, bytestring
-     , directory, hspec, pandoc, persistent, shakespeare, texmath, text
+     , directory, hspec, pandoc, persistent, shakespeare, text
      , xss-sanitize, yesod-core, yesod-form
      }:
      mkDerivation {
        pname = "yesod-markdown";
-       version = "0.11.4";
-       sha256 = "05m9h70s50bl1s2xbzbnfa2xy3aizq5cjsfi3rqj4fal0ralqbpa";
+       version = "0.12.0";
+       sha256 = "0hqpshgjx3agci4wxgzi6v3s8y0q5d4x18gkqlf204a3fynm0fmh";
        libraryHaskellDepends = [
          base blaze-html blaze-markup bytestring directory pandoc persistent
-         shakespeare texmath text xss-sanitize yesod-core yesod-form
+         shakespeare text xss-sanitize yesod-core yesod-form
        ];
        testHaskellDepends = [ base blaze-html hspec text ];
        homepage = "http://github.com/pbrisbin/yesod-markdown";
@@ -222924,8 +224571,7 @@ self: {
 
   "yesod-paginator" = callPackage
     ({ mkDerivation, base, data-default, hspec, persistent, resourcet
-     , text, transformers, wai-extra, warp, yesod, yesod-core
-     , yesod-test
+     , text, transformers, wai-extra, yesod, yesod-core, yesod-test
      }:
      mkDerivation {
        pname = "yesod-paginator";
@@ -222936,7 +224582,6 @@ self: {
        libraryHaskellDepends = [
          base persistent resourcet text transformers yesod
        ];
-       executableHaskellDepends = [ base warp yesod ];
        testHaskellDepends = [
          base data-default hspec wai-extra yesod-core yesod-test
        ];
@@ -223494,8 +225139,7 @@ self: {
     ({ mkDerivation, aeson, base, blaze-builder, blaze-markup
      , bytestring, data-default, directory, filepath, hamlet, hspec
      , HUnit, language-javascript, mime-types, shakespeare
-     , template-haskell, text, yesod, yesod-core, yesod-static
-     , yesod-test
+     , template-haskell, text, yesod-core, yesod-static, yesod-test
      }:
      mkDerivation {
        pname = "yesod-static-angular";
@@ -223508,9 +225152,6 @@ self: {
          directory filepath hamlet language-javascript mime-types
          shakespeare template-haskell text yesod-core yesod-static
        ];
-       executableHaskellDepends = [
-         base data-default shakespeare yesod yesod-static
-       ];
        testHaskellDepends = [
          base bytestring hamlet hspec HUnit shakespeare template-haskell
          text yesod-core yesod-static yesod-test
@@ -223575,23 +225216,23 @@ self: {
        license = stdenv.lib.licenses.mit;
      }) {};
 
-  "yesod-test_1_6_0" = callPackage
+  "yesod-test_1_6_1" = callPackage
     ({ mkDerivation, attoparsec, base, blaze-builder, blaze-html
      , blaze-markup, bytestring, case-insensitive, conduit, containers
      , cookie, hspec, hspec-core, html-conduit, http-types, HUnit
-     , network, persistent, pretty-show, text, time, transformers
-     , unliftio, wai, wai-extra, xml-conduit, xml-types, yesod-core
-     , yesod-form
+     , network, persistent, pretty-show, semigroups, text, time
+     , transformers, unliftio, wai, wai-extra, xml-conduit, xml-types
+     , yesod-core, yesod-form
      }:
      mkDerivation {
        pname = "yesod-test";
-       version = "1.6.0";
-       sha256 = "0xdl20qm0h6dx6cbzp0d9n0qmpfz3wrn5lwwy2zrpx7bgb967fq6";
+       version = "1.6.1";
+       sha256 = "1lwckkbm5i0fj8ixa396v7h683kdvbmxdrwc62y3qbi7hlz2iars";
        libraryHaskellDepends = [
          attoparsec base blaze-builder blaze-html blaze-markup bytestring
          case-insensitive conduit containers cookie hspec-core html-conduit
-         http-types HUnit network persistent pretty-show text time
-         transformers wai wai-extra xml-conduit xml-types yesod-core
+         http-types HUnit network persistent pretty-show semigroups text
+         time transformers wai wai-extra xml-conduit xml-types yesod-core
        ];
        testHaskellDepends = [
          base bytestring containers hspec html-conduit http-types HUnit text
@@ -224386,7 +226027,6 @@ self: {
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base bindings-DSL ieee754 ];
-       executableHaskellDepends = [ base ];
        description = "Bindings to Facebook's Yoga layout library";
        license = stdenv.lib.licenses.bsd3;
        hydraPlatforms = stdenv.lib.platforms.none;
@@ -224660,8 +226300,8 @@ self: {
      }:
      mkDerivation {
        pname = "z3";
-       version = "4.1.2";
-       sha256 = "09wph5hp5835npfib07852x4d122p8nh35cbwyr80a83a77l7yym";
+       version = "4.2.0";
+       sha256 = "1rzdsn54508y6w965a8y2g118ylx6588gxbdi3dd9ihqh9mdzg31";
        isLibrary = true;
        isExecutable = true;
        libraryHaskellDepends = [ base containers mtl ];
@@ -225150,6 +226790,8 @@ self: {
        pname = "zip";
        version = "0.2.0";
        sha256 = "18r3n1q4acn8fp3hcb47zr43nmpiab3j7r5m06j7csgm17x93vsr";
+       revision = "1";
+       editedCabalFile = "1lq4v58kq4mwqczbdly4xnhg0pwsn4a5jmsdm38l2svri3by1hbb";
        libraryHaskellDepends = [
          base bytestring bzlib-conduit case-insensitive cereal conduit
          conduit-extra containers digest exceptions filepath monad-control
@@ -225165,6 +226807,33 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {};
 
+  "zip_1_0_0" = callPackage
+    ({ mkDerivation, base, bytestring, bzlib-conduit, case-insensitive
+     , cereal, conduit, conduit-extra, containers, digest, directory
+     , dlist, exceptions, filepath, hspec, monad-control, mtl
+     , QuickCheck, resourcet, temporary, text, time, transformers
+     , transformers-base
+     }:
+     mkDerivation {
+       pname = "zip";
+       version = "1.0.0";
+       sha256 = "166iqyrmghlwwnka1gyxqjh875x7d3h0jnljlaslfvkfjhvb9ym9";
+       libraryHaskellDepends = [
+         base bytestring bzlib-conduit case-insensitive cereal conduit
+         conduit-extra containers digest directory dlist exceptions filepath
+         monad-control mtl resourcet text time transformers
+         transformers-base
+       ];
+       testHaskellDepends = [
+         base bytestring conduit containers directory dlist exceptions
+         filepath hspec QuickCheck temporary text time transformers
+       ];
+       homepage = "https://github.com/mrkkrp/zip";
+       description = "Operations on zip archives";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {};
+
   "zip-archive" = callPackage
     ({ mkDerivation, array, base, binary, bytestring, containers
      , digest, directory, filepath, HUnit, mtl, old-time, pretty
@@ -225180,7 +226849,6 @@ self: {
          array base binary bytestring containers digest directory filepath
          mtl old-time pretty text time unix zlib
        ];
-       executableHaskellDepends = [ base bytestring directory ];
        testHaskellDepends = [
          base bytestring directory filepath HUnit old-time process temporary
          time unix
@@ -225191,6 +226859,33 @@ self: {
        license = stdenv.lib.licenses.bsd3;
      }) {inherit (pkgs) unzip; inherit (pkgs) zip;};
 
+  "zip-archive_0_3_2_3" = callPackage
+    ({ mkDerivation, array, base, binary, bytestring, Cabal, containers
+     , digest, directory, filepath, HUnit, mtl, old-time, pretty
+     , process, temporary, text, time, unix, unzip, zlib
+     }:
+     mkDerivation {
+       pname = "zip-archive";
+       version = "0.3.2.3";
+       sha256 = "1b3zll9j3w57kxnng09c5xcj0d18ldj9i3f8qks4kyyrsgyviw9x";
+       isLibrary = true;
+       isExecutable = true;
+       setupHaskellDepends = [ base Cabal ];
+       libraryHaskellDepends = [
+         array base binary bytestring containers digest directory filepath
+         mtl old-time pretty text time unix zlib
+       ];
+       libraryToolDepends = [ unzip ];
+       testHaskellDepends = [
+         base bytestring directory filepath HUnit old-time process temporary
+         time unix
+       ];
+       homepage = "http://github.com/jgm/zip-archive";
+       description = "Library for creating and modifying zip archives";
+       license = stdenv.lib.licenses.bsd3;
+       hydraPlatforms = stdenv.lib.platforms.none;
+     }) {inherit (pkgs) unzip;};
+
   "zip-conduit" = callPackage
     ({ mkDerivation, base, bytestring, cereal, conduit, conduit-extra
      , criterion, digest, directory, filepath, hpc, HUnit, LibZip, mtl
@@ -225296,6 +226991,8 @@ self: {
        pname = "zippers";
        version = "0.2.5";
        sha256 = "11f0jx0dbm2y9y5hnpakdvk9fmsm3awr2lcxp46dyma6arr7f4id";
+       revision = "1";
+       editedCabalFile = "0nndhvgkv1v8zg906cblnxb5xiz0ghmvwdwnsn85pyp0rjplcv1k";
        setupHaskellDepends = [ base Cabal cabal-doctest ];
        libraryHaskellDepends = [
          base lens profunctors semigroupoids semigroups
diff --git a/pkgs/development/haskell-modules/make-package-set.nix b/pkgs/development/haskell-modules/make-package-set.nix
index 0f866a96e71e..2c628eff5622 100644
--- a/pkgs/development/haskell-modules/make-package-set.nix
+++ b/pkgs/development/haskell-modules/make-package-set.nix
@@ -112,7 +112,7 @@ let
       sha256Arg = if isNull sha256 then "--sha256=" else ''--sha256="${sha256}"'';
     in pkgs.buildPackages.stdenv.mkDerivation {
       name = "cabal2nix-${name}";
-      nativeBuildInputs = [ pkgs.buildPackages.haskellPackages.cabal2nix ];
+      nativeBuildInputs = [ pkgs.buildPackages.cabal2nix ];
       preferLocalBuild = true;
       phases = ["installPhase"];
       LANG = "en_US.UTF-8";
diff --git a/pkgs/development/haskell-modules/with-packages-wrapper.nix b/pkgs/development/haskell-modules/with-packages-wrapper.nix
index aa0090e4cff5..d858787f43cd 100644
--- a/pkgs/development/haskell-modules/with-packages-wrapper.nix
+++ b/pkgs/development/haskell-modules/with-packages-wrapper.nix
@@ -56,7 +56,6 @@ symlinkJoin {
   # as a dedicated drv attribute, like `compiler-name`
   name = ghc.name + "-with-packages";
   paths = paths ++ [ghc];
-  extraOutputsToInstall = [ "out" "doc" ];
   postBuild = ''
     . ${makeWrapper}/nix-support/setup-hook
 
diff --git a/pkgs/development/idris-modules/build-builtin-package.nix b/pkgs/development/idris-modules/build-builtin-package.nix
index 6de3f8b16669..44efa97a5319 100644
--- a/pkgs/development/idris-modules/build-builtin-package.nix
+++ b/pkgs/development/idris-modules/build-builtin-package.nix
@@ -1,4 +1,4 @@
-# Build one of the packages that come with idris
+# Build one of the packages that comes with idris
 # name: The name of the package
 # deps: The dependencies of the package
 { idris, build-idris-package, lib }: name: deps:
@@ -6,20 +6,16 @@ let
   inherit (builtins.parseDrvName idris.name) version;
 in
 build-idris-package {
-  name = "${name}-${version}";
-
-  propagatedBuildInputs = deps;
 
+  inherit name version;
   inherit (idris) src;
 
+  idrisDeps = deps;
+
   postUnpack = ''
     sourceRoot=$sourceRoot/libs/${name}
   '';
 
-  postPatch = ''
-    sed -i ${name}.ipkg -e "/^opts/ s|-i \\.\\./|-i $IDRIS_LIBRARY_PATH/|g"
-  '';
-
   meta = idris.meta // {
     description = "${name} builtin Idris library";
   };
diff --git a/pkgs/development/idris-modules/build-idris-package.nix b/pkgs/development/idris-modules/build-idris-package.nix
index 0048634f5b45..0416e76afa9e 100644
--- a/pkgs/development/idris-modules/build-idris-package.nix
+++ b/pkgs/development/idris-modules/build-idris-package.nix
@@ -1,23 +1,46 @@
 # Build an idris package
-#
-# args: Additional arguments to pass to mkDerivation. Generally should include at least
-#       name and src.
-{ stdenv, idris, gmp }: args: stdenv.mkDerivation ({
-  buildPhase = ''
-    idris --build *.ipkg
+{ stdenv, idrisPackages, gmp }:
+  { idrisDeps ? []
+  , name
+  , version
+  , src
+  , meta
+  , extraBuildInputs ? []
+  , postUnpack ? ""
+  , doCheck ? true
+  }:
+let
+  idris-with-packages = idrisPackages.with-packages idrisDeps;
+in
+stdenv.mkDerivation ({
+
+  name = "${name}-${version}";
+
+  inherit postUnpack src doCheck meta;
+
+
+  # Some packages use the style
+  # opts = -i ../../path/to/package
+  # rather than the declarative pkgs attribute so we have to rewrite the path.
+  postPatch = ''
+    sed -i *.ipkg -e "/^opts/ s|-i \\.\\./|-i ${idris-with-packages}/libs/|g"
   '';
 
-  doCheck = true;
+  buildPhase = ''
+    ${idris-with-packages}/bin/idris --build *.ipkg
+  '';
 
   checkPhase = ''
     if grep -q test *.ipkg; then
-      idris --testpkg *.ipkg
+      ${idris-with-packages}/bin/idris --testpkg *.ipkg
     fi
   '';
 
   installPhase = ''
-    idris --install *.ipkg --ibcsubdir $IBCSUBDIR
+    ${idris-with-packages}/bin/idris --install *.ipkg --ibcsubdir $out/libs
   '';
 
-  buildInputs = [ gmp idris ];
-} // args)
+  buildInputs = [ gmp ] ++ extraBuildInputs;
+
+  propagatedBuildInputs = idrisDeps;
+})
diff --git a/pkgs/development/idris-modules/default.nix b/pkgs/development/idris-modules/default.nix
index 16f6c65b094a..35ee20e96224 100644
--- a/pkgs/development/idris-modules/default.nix
+++ b/pkgs/development/idris-modules/default.nix
@@ -25,14 +25,8 @@
       pruviloj = [ self.prelude self.base ];
     };
 
-    files = builtins.filter (n: n != "default") (pkgs.lib.mapAttrsToList (name: type: let
-      m = builtins.match "(.*)\\.nix" name;
-    in if m == null then "default" else builtins.head m) (builtins.readDir ./.));
-  in (builtins.listToAttrs (map (name: {
-    inherit name;
-
-    value = callPackage (./. + "/${name}.nix") {};
-  }) files)) // {
+  in
+    {
     inherit idris-no-deps callPackage;
     # See #10450 about why we have to wrap the executable
     idris =
@@ -40,7 +34,28 @@
           idris-no-deps
           { path = [ pkgs.gcc ]; lib = [pkgs.gmp]; };
 
+
+    with-packages = callPackage ./with-packages.nix {} ;
+
+    build-builtin-package = callPackage ./build-builtin-package.nix {};
+
+    build-idris-package = callPackage ./build-idris-package.nix {};
+
+    # Libraries
+
     # A list of all of the libraries that come with idris
     builtins = pkgs.lib.mapAttrsToList (name: value: value) builtins_;
+
+    httpclient = callPackage ./httpclient.nix {};
+
+    lightyear = callPackage ./lightyear.nix {};
+
+    optparse = callPackage ./optparse.nix {};
+
+    wl-pprint = callPackage ./wl-pprint.nix {};
+
+    specdris = callPackage ./specdris.nix {};
+
+
   } // builtins_;
 in fix' (extends overrides idrisPackages)
diff --git a/pkgs/development/idris-modules/httpclient.nix b/pkgs/development/idris-modules/httpclient.nix
index ec41956b9634..13c33d04da51 100644
--- a/pkgs/development/idris-modules/httpclient.nix
+++ b/pkgs/development/idris-modules/httpclient.nix
@@ -1,17 +1,20 @@
-{ pkgs
+{ curl
 , build-idris-package
 , fetchFromGitHub
 , lightyear
 , contrib
+, effects
+, prelude
+, base
 , lib
 , idris
 }:
 
 let
-  date = "2016-12-20";
 in
 build-idris-package {
-  name = "httpclient-${date}";
+  name = "httpclient";
+  version = "2016-12-20";
 
   src = fetchFromGitHub {
     owner = "justjoheinz";
@@ -20,11 +23,14 @@ build-idris-package {
     sha256 = "0sy0q7gri9lwbqdmx9720pby3w1470w7wzn62bf2rir532219hhl";
   };
 
-  propagatedBuildInputs = [ pkgs.curl lightyear contrib ];
+  idrisDeps = [ prelude base effects lightyear contrib ];
+
+  extraBuildInputs = [ curl ];
 
   meta = {
     description = "HTTP Client for Idris";
     homepage = https://github.com/justjoheinz/idris-httpclient;
     inherit (idris.meta) platforms;
+    broken = true;
   };
 }
diff --git a/pkgs/development/idris-modules/idris-wrapper.nix b/pkgs/development/idris-modules/idris-wrapper.nix
index 155098a46252..fcd02c4da246 100644
--- a/pkgs/development/idris-modules/idris-wrapper.nix
+++ b/pkgs/development/idris-modules/idris-wrapper.nix
@@ -10,8 +10,5 @@ symlinkJoin {
     wrapProgram $out/bin/idris \
       --suffix PATH : ${ stdenv.lib.makeBinPath path } \
       --suffix LIBRARY_PATH : ${stdenv.lib.makeLibraryPath lib}
-
-    mkdir -p $out/nix-support
-    substituteAll ${./setup-hook.sh} $out/nix-support/setup-hook
       '';
   }
diff --git a/pkgs/development/idris-modules/lightyear.nix b/pkgs/development/idris-modules/lightyear.nix
index 27828e6f41f6..e217e76e2a78 100644
--- a/pkgs/development/idris-modules/lightyear.nix
+++ b/pkgs/development/idris-modules/lightyear.nix
@@ -10,8 +10,11 @@
 let
   date = "2017-09-10";
 in
-build-idris-package {
-  name = "lightyear-${date}";
+build-idris-package  {
+  name = "lightyear";
+  version = date;
+
+  idrisDeps = [ prelude base effects ];
 
   src = fetchFromGitHub {
     owner = "ziman";
@@ -20,8 +23,6 @@ build-idris-package {
     sha256 = "05x66abhpbdm6yr0afbwfk6w04ysdk78gylj5alhgwhy4jqakv29";
   };
 
-  propagatedBuildInputs = [ prelude base effects ];
-
   meta = {
     description = "Parser combinators for Idris";
     homepage = https://github.com/ziman/lightyear;
diff --git a/pkgs/development/idris-modules/setup-hook.sh b/pkgs/development/idris-modules/setup-hook.sh
deleted file mode 100644
index 30a487ea80d4..000000000000
--- a/pkgs/development/idris-modules/setup-hook.sh
+++ /dev/null
@@ -1,16 +0,0 @@
-# Library import path
-export IDRIS_LIBRARY_PATH=$PWD/idris-libs
-mkdir -p $IDRIS_LIBRARY_PATH
-
-# Library install path
-export IBCSUBDIR=$out/lib/@name@
-mkdir -p $IBCSUBDIR
-
-addIdrisLibs () {
-  if [ -d $1/lib/@name@ ]; then
-    ln -sv $1/lib/@name@/* $IDRIS_LIBRARY_PATH
-  fi
-}
-
-# All run-time deps
-addEnvHooks 1 addIdrisLibs
diff --git a/pkgs/development/idris-modules/specdris.nix b/pkgs/development/idris-modules/specdris.nix
index e6ca49aa489a..e20af3752371 100644
--- a/pkgs/development/idris-modules/specdris.nix
+++ b/pkgs/development/idris-modules/specdris.nix
@@ -11,7 +11,8 @@ let
   date = "2017-11-11";
 in
 build-idris-package {
-  name = "specdris-${date}";
+  name = "specdris";
+  version = date;
 
   src = fetchgit {
     url = "https://github.com/pheymann/specdris";
@@ -19,21 +20,10 @@ build-idris-package {
     sha256 = "4813c4be1d4c3dd1dad35964b085f83cf9fb44b16824257c72b468d4bafd0e4f";
   };
 
-  propagatedBuildInputs = [ prelude base effects ];
+  idrisDeps = [ prelude base effects idris ];
 
-  buildPhase = ''
-    ${idris}/bin/idris --build specdris.ipkg
-  '';
-
-  checkPhase = ''
-      cd test/
-      ${idris}/bin/idris --testpkg test.ipkg
-      cd ../
-    '';
-
-  installPhase = ''
-    ${idris}/bin/idris --install specdris.ipkg --ibcsubdir $IBCSUBDIR
-  '';
+  # The tests attribute is very strange as the tests are a different ipkg
+  doCheck = false;
 
   meta = {
     description = "A testing library for Idris";
diff --git a/pkgs/development/idris-modules/with-packages.nix b/pkgs/development/idris-modules/with-packages.nix
index d4638670f699..1631555eee4a 100644
--- a/pkgs/development/idris-modules/with-packages.nix
+++ b/pkgs/development/idris-modules/with-packages.nix
@@ -1,46 +1,20 @@
 # Build a version of idris with a set of packages visible
 # packages: The packages visible to idris
-{ stdenv, idris }: packages: stdenv.mkDerivation {
-  inherit (idris) name;
+{ stdenv, idris, symlinkJoin, makeWrapper }: packages:
 
-  buildInputs = packages;
+let paths = stdenv.lib.closePropagation packages;
+in
+symlinkJoin {
 
-  preHook = ''
-    mkdir -p $out/lib/${idris.name}
+  name = idris.name + "-with-packages";
 
-    installIdrisLib () {
-      if [ -d $1/lib/${idris.name} ]; then
-        ln -fsv $1/lib/${idris.name}/* $out/lib/${idris.name}
-      fi
-    }
+  paths = paths ++ [idris] ;
 
-    envHostTargetHooks+=(installIdrisLib)
-  '';
+  buildInputs = [ makeWrapper ];
 
-  unpackPhase = ''
-    cat >idris.c <<EOF
-    #include <stdlib.h>
-    #include <unistd.h>
-    #include <stdio.h>
+  postBuild = ''
+    wrapProgram $out/bin/idris \
+      --set IDRIS_LIBRARY_PATH $out/libs
+      '';
 
-    int main (int argc, char ** argv) {
-      /* idris currently only supports a single library path, so respect it if the user set it */
-      setenv("IDRIS_LIBRARY_PATH", "$out/lib/${idris.name}", 0);
-      execv("${idris}/bin/idris", argv);
-      perror("executing ${idris}/bin/idris");
-      return 127;
-    }
-    EOF
-  '';
-
-  buildPhase = ''
-    $CC -O3 -o idris idris.c
-  '';
-
-  installPhase = ''
-    mkdir -p $out/bin
-    mv idris $out/bin
-  '';
-
-  stripAllList = [ "bin" ];
 }
diff --git a/pkgs/development/idris-modules/wl-pprint.nix b/pkgs/development/idris-modules/wl-pprint.nix
index 12e9b28d81c0..7e6d77a19a21 100644
--- a/pkgs/development/idris-modules/wl-pprint.nix
+++ b/pkgs/development/idris-modules/wl-pprint.nix
@@ -6,7 +6,8 @@
 , idris
 }:
 build-idris-package {
-  name = "wl-pprint-2016-09-28";
+  pkName = "wl-pprint";
+  version = "2016-09-28";
 
   src = fetchFromGitHub {
     owner = "shayan-najd";
@@ -19,7 +20,7 @@ build-idris-package {
   # updating this package again.
   doCheck = false;
 
-  propagatedBuildInputs = [ prelude base ];
+  idrisDeps = [ prelude base ];
 
   meta = {
     description = "Wadler-Leijen pretty-printing library";
diff --git a/pkgs/development/interpreters/clojure/default.nix b/pkgs/development/interpreters/clojure/default.nix
index 5aaa18e5ac68..7aac606fdfb2 100644
--- a/pkgs/development/interpreters/clojure/default.nix
+++ b/pkgs/development/interpreters/clojure/default.nix
@@ -1,25 +1,28 @@
-{ stdenv, fetchurl, jdk, makeWrapper }:
+{ stdenv, fetchurl, jdk, rlwrap, makeWrapper }:
 
-let version = "1.9.0.273"; in
-
-stdenv.mkDerivation {
+stdenv.mkDerivation rec {
   name = "clojure-${version}";
+  version = "1.9.0.329";
 
   src = fetchurl {
     url = "https://download.clojure.org/install/clojure-tools-${version}.tar.gz";
-    sha256 = "0xmrq3xvr002jgq8m1j0y5ld0rcr49608g3gqxgyxzjqswacglb4";
+    sha256 = "1g1mi75285z977vrqbihmmmrmdcnznxbw3r6wkzh571sc1yyrlrj";
   };
 
-  buildInputs = [ jdk makeWrapper ];
+  buildInputs = [ makeWrapper ];
+
+  outputs = [ "out" "prefix" ];
 
   installPhase = ''
-    pwd
-    ls -la
-    mkdir -p $out/libexec $out/bin
-    cp -f deps.edn example-deps.edn $out
-    cp -f clojure-tools-${version}.jar $out/libexec
-    sed -i -e "s@PREFIX@$out@g" clojure
-    cp -f clj clojure $out/bin
+    mkdir -p $prefix/libexec
+    cp clojure-tools-${version}.jar $prefix/libexec
+    cp {,example-}deps.edn $prefix
+
+    substituteInPlace clojure --replace PREFIX $prefix
+
+    install -Dt $out/bin clj clojure
+    wrapProgram $out/bin/clj --suffix PATH ${rlwrap}/bin
+    wrapProgram $out/bin/clojure --suffix PATH ${jdk}/bin
   '';
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/interpreters/dart/default.nix b/pkgs/development/interpreters/dart/default.nix
index 3d19f7ba2911..17f124e79890 100644
--- a/pkgs/development/interpreters/dart/default.nix
+++ b/pkgs/development/interpreters/dart/default.nix
@@ -1,26 +1,51 @@
-{ stdenv, fetchurl, unzip }:
+{ stdenv, fetchurl, unzip, version }:
 
 let
-  version = "1.16.1";
+
+  sources = let
+
+    base = "https://storage.googleapis.com/dart-archive/channels";
+    stable = "${base}/stable/release";
+    dev = "${base}/dev/release";
+
+  in {
+    "1.16.1-x86_64-linux" = fetchurl {
+      url = "${stable}/${version}/sdk/dartsdk-linux-x64-release.zip";
+      sha256 = "01cbnc8hd2wwprmivppmzvld9ps644k16wpgqv31h1596l5p82n2";
+    };
+    "1.16.1-i686-linux" = fetchurl {
+      url = "${stable}/${version}/sdk/dartsdk-linux-ia32-release.zip";
+      sha256 = "0jfwzc3jbk4n5j9ka59s9bkb25l5g85fl1nf676mvj36swcfykx3";
+    };
+    "1.24.3-x86_64-linux" = fetchurl {
+      url = "${stable}/${version}/sdk/dartsdk-linux-x64-release.zip";
+      sha256 = "e323c97c35e6bc5d955babfe2e235a5484a82bb1e4870fa24562c8b9b800559b";
+    };
+    "1.24.3-i686-linux" = fetchurl {
+      url = "${stable}/${version}/sdk/dartsdk-linux-ia32-release.zip";
+      sha256 = "d67b8f8f9186e7d460320e6bce25ab343c014b6af4b2f61369ee83755d4da528";
+    };
+    "2.0.0-dev.26.0-x86_64-linux" = fetchurl {
+      url = "${dev}/${version}/sdk/dartsdk-linux-x64-release.zip";
+      sha256 = "18360489a7914d5df09b34934393e16c7627ba673c1e9ab5cfd11cd1d58fd7df";
+    };
+    "2.0.0-dev.26.0-i686-linux" = fetchurl {
+      url = "${dev}/${version}/sdk/dartsdk-linux-ia32-release.zip";
+      sha256 = "83ba8b64c76f48d8de4e0eb887e49b7960053f570d27e7ea438cc0bac789955e";
+    };
+  };
+
 in
+
 stdenv.mkDerivation {
+
   name = "dart-${version}";
 
   nativeBuildInputs = [
     unzip
   ];
-  
-  src =
-    if stdenv.system == "x86_64-linux" then
-      fetchurl {
-        url = "https://storage.googleapis.com/dart-archive/channels/stable/release/${version}/sdk/dartsdk-linux-x64-release.zip";
-        sha256 = "01cbnc8hd2wwprmivppmzvld9ps644k16wpgqv31h1596l5p82n2";
-      }
-    else
-      fetchurl {
-        url = "https://storage.googleapis.com/dart-archive/channels/stable/release/${version}/sdk/dartsdk-linux-ia32-release.zip";
-        sha256 = "0jfwzc3jbk4n5j9ka59s9bkb25l5g85fl1nf676mvj36swcfykx3";
-      };
+
+  src = sources."${version}-${stdenv.system}" or (throw "unsupported version/system: ${version}/${stdenv.system}");
 
   installPhase = ''
     mkdir -p $out
diff --git a/pkgs/development/interpreters/duktape/default.nix b/pkgs/development/interpreters/duktape/default.nix
new file mode 100644
index 000000000000..c54a9d204cba
--- /dev/null
+++ b/pkgs/development/interpreters/duktape/default.nix
@@ -0,0 +1,31 @@
+{ stdenv, fetchurl }:
+
+stdenv.mkDerivation rec {
+  name = "duktape-${version}";
+  version = "2.2.0";
+  src = fetchurl {
+    url = "http://duktape.org/duktape-${version}.tar.xz";
+    sha256 = "050csp065ll67dck94s0vdad5r5ck4jwsz1fn1y0fcvn88325xv2";
+  };
+
+  buildPhase = ''
+    make -f Makefile.sharedlibrary
+    make -f Makefile.cmdline
+  '';
+  installPhase = ''
+    install -d $out/bin
+    install -m755 duk $out/bin/
+    install -d $out/lib
+    install -m755 libduktape* $out/lib/
+  '';
+  enableParallelBuilding = true;
+
+  meta = with stdenv.lib; {
+    description = "An embeddable Javascript engine, with a focus on portability and compact footprint";
+    homepage = "http://duktape.org/";
+    downloadPage = "http://duktape.org/download.html";
+    license = licenses.mit;
+    maintainers = [ maintainers.fgaz ];
+    platforms = platforms.linux;
+  };
+}
diff --git a/pkgs/development/interpreters/gnu-apl/default.nix b/pkgs/development/interpreters/gnu-apl/default.nix
index 4d38545a44f0..2f5ce0e76350 100644
--- a/pkgs/development/interpreters/gnu-apl/default.nix
+++ b/pkgs/development/interpreters/gnu-apl/default.nix
@@ -12,6 +12,9 @@ stdenv.mkDerivation rec {
 
   buildInputs = [ readline gettext ncurses ];
 
+  # Needed with GCC 7
+  NIX_CFLAGS_COMPILE = "-Wno-error=int-in-bool-context";
+
   patchPhase = optionalString stdenv.isDarwin ''
     substituteInPlace src/LApack.cc --replace "malloc.h" "malloc/malloc.h"
   '';
diff --git a/pkgs/development/interpreters/lua-5/5.1.nix b/pkgs/development/interpreters/lua-5/5.1.nix
index 1981c15c5f3e..1c4fcd2811d1 100644
--- a/pkgs/development/interpreters/lua-5/5.1.nix
+++ b/pkgs/development/interpreters/lua-5/5.1.nix
@@ -33,7 +33,7 @@ stdenv.mkDerivation rec {
     makeFlagsArray=( INSTALL_TOP=$out INSTALL_MAN=$out/share/man/man1 PLAT=macosx CFLAGS="-DLUA_USE_LINUX -fno-common -O2" LDFLAGS="" CC="$CC" )
     installFlagsArray=( TO_BIN="lua luac" TO_LIB="liblua.5.1.5.dylib" INSTALL_DATA='cp -d' )
   '' else ''
-    makeFlagsArray=( INSTALL_TOP=$out INSTALL_MAN=$out/share/man/man1 PLAT=linux CFLAGS="-DLUA_USE_LINUX -O2 -fPIC" LDFLAGS="-fPIC" )
+    makeFlagsArray=( INSTALL_TOP=$out INSTALL_MAN=$out/share/man/man1 PLAT=linux CFLAGS="-DLUA_USE_LINUX -O2 -fPIC" LDFLAGS="-fPIC" CC="$CC" AR="$AR q" RANLIB="$RANLIB" )
     installFlagsArray=( TO_BIN="lua luac" TO_LIB="liblua.a liblua.so liblua.so.5.1 liblua.so.5.1.5" INSTALL_DATA='cp -d' )
   '';
 
diff --git a/pkgs/development/interpreters/python/build-python-package.nix b/pkgs/development/interpreters/python/build-python-package.nix
index 12d17b2e8322..6a07a006c6b5 100644
--- a/pkgs/development/interpreters/python/build-python-package.nix
+++ b/pkgs/development/interpreters/python/build-python-package.nix
@@ -6,7 +6,7 @@
 , wrapPython
 , setuptools
 , unzip
-, ensureNewerSourcesHook
+, ensureNewerSourcesForZipFilesHook
 , toPythonModule
 , namePrefix
 , bootstrapped-pip
@@ -19,7 +19,7 @@ let
   wheel-specific = import ./build-python-package-wheel.nix { };
   common = import ./build-python-package-common.nix { inherit python bootstrapped-pip; };
   mkPythonDerivation = import ./mk-python-derivation.nix {
-    inherit lib python wrapPython setuptools unzip ensureNewerSourcesHook toPythonModule namePrefix;
+    inherit lib python wrapPython setuptools unzip ensureNewerSourcesForZipFilesHook toPythonModule namePrefix;
   };
 in
 
diff --git a/pkgs/development/interpreters/python/cpython/2.7/default.nix b/pkgs/development/interpreters/python/cpython/2.7/default.nix
index 1cb739b4d29f..61f17a959bd9 100644
--- a/pkgs/development/interpreters/python/cpython/2.7/default.nix
+++ b/pkgs/development/interpreters/python/cpython/2.7/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, hostPlatform, fetchurl
+{ stdenv, hostPlatform, buildPlatform, buildPackages, fetchurl
 , bzip2
 , gdbm
 , fetchpatch
@@ -88,7 +88,6 @@ let
       # only works for GCC and Apple Clang. This makes distutils to call C++
       # compiler when needed.
       ./python-2.7-distutils-C++.patch
-
     ];
 
   preConfigure = ''
@@ -117,6 +116,28 @@ let
     "ac_cv_func_bind_textdomain_codeset=yes"
   ] ++ optionals stdenv.isDarwin [
     "--disable-toolbox-glue"
+  ] ++ optionals (hostPlatform != buildPlatform) [
+    "PYTHON_FOR_BUILD=${getBin buildPackages.python}/bin/python"
+    "ac_cv_buggy_getaddrinfo=no"
+    # Assume little-endian IEEE 754 floating point when cross compiling
+    "ac_cv_little_endian_double=yes"
+    "ac_cv_big_endian_double=no"
+    "ac_cv_mixed_endian_double=no"
+    "ac_cv_x87_double_rounding=yes"
+    "ac_cv_tanh_preserves_zero_sign=yes"
+    # Generally assume that things are present and work
+    "ac_cv_posix_semaphores_enabled=yes"
+    "ac_cv_broken_sem_getvalue=no"
+    "ac_cv_wchar_t_signed=yes"
+    "ac_cv_rshift_extends_sign=yes"
+    "ac_cv_broken_nice=no"
+    "ac_cv_broken_poll=no"
+    "ac_cv_working_tzset=yes"
+    "ac_cv_have_long_long_format=yes"
+    "ac_cv_have_size_t_format=yes"
+    "ac_cv_computed_gotos=yes"
+    "ac_cv_file__dev_ptmx=yes"
+    "ac_cv_file__dev_ptc=yes"
   ];
 
   postConfigure = if hostPlatform.isCygwin then ''
@@ -131,6 +152,9 @@ let
     ++ [ db gdbm ncurses sqlite readline ]
     ++ optionals x11Support [ tcl tk xlibsWrapper libX11 ]
     ++ optionals stdenv.isDarwin ([ CF ] ++ optional (configd != null) configd);
+  nativeBuildInputs =
+    optionals (hostPlatform != buildPlatform)
+    [ buildPackages.stdenv.cc buildPackages.python ];
 
   mkPaths = paths: {
     C_INCLUDE_PATH = makeSearchPathOutput "dev" "include" paths;
@@ -144,7 +168,7 @@ in stdenv.mkDerivation {
     name = "python-${version}";
     pythonVersion = majorVersion;
 
-    inherit majorVersion version src patches buildInputs
+    inherit majorVersion version src patches buildInputs nativeBuildInputs
             preConfigure configureFlags;
 
     LDFLAGS = stdenv.lib.optionalString (!stdenv.isDarwin) "-lgcc_s";
@@ -187,7 +211,8 @@ in stdenv.mkDerivation {
         # Determinism: Windows installers were not deterministic.
         # We're also not interested in building Windows installers.
         find "$out" -name 'wininst*.exe' | xargs -r rm -f
-
+      '' + optionalString (stdenv.hostPlatform == stdenv.buildPlatform)
+      ''
         # Determinism: rebuild all bytecode
         # We exclude lib2to3 because that's Python 2 code which fails
         # We rebuild three times, once for each optimization level
diff --git a/pkgs/development/interpreters/python/cpython/3.6/default.nix b/pkgs/development/interpreters/python/cpython/3.6/default.nix
index f48f2c19026c..fb58d0871ecb 100644
--- a/pkgs/development/interpreters/python/cpython/3.6/default.nix
+++ b/pkgs/development/interpreters/python/cpython/3.6/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, fetchpatch
+{ stdenv, fetchurl, fetchpatch, buildPackages
 , glibc
 , bzip2
 , expat
@@ -39,12 +39,15 @@ let
     ++ optionals x11Support [ tcl tk libX11 xproto ]
     ++ optionals stdenv.isDarwin [ CF configd ];
 
+  nativeBuildInputs =
+    optional (stdenv.hostPlatform != stdenv.buildPlatform) buildPackages.python3;
+
 in stdenv.mkDerivation {
   name = "python3-${version}";
   pythonVersion = majorVersion;
   inherit majorVersion version;
 
-  inherit buildInputs;
+  inherit buildInputs nativeBuildInputs;
 
   src = fetchurl {
     url = "https://www.python.org/ftp/python/${majorVersion}.${minorVersion}/Python-${version}.tar.xz";
@@ -87,6 +90,27 @@ in stdenv.mkDerivation {
     "--without-ensurepip"
     "--with-system-expat"
     "--with-system-ffi"
+  ] ++ optionals (stdenv.hostPlatform != stdenv.buildPlatform) [
+    "ac_cv_buggy_getaddrinfo=no"
+    # Assume little-endian IEEE 754 floating point when cross compiling
+    "ac_cv_little_endian_double=yes"
+    "ac_cv_big_endian_double=no"
+    "ac_cv_mixed_endian_double=no"
+    "ac_cv_x87_double_rounding=yes"
+    "ac_cv_tanh_preserves_zero_sign=yes"
+    # Generally assume that things are present and work
+    "ac_cv_posix_semaphores_enabled=yes"
+    "ac_cv_broken_sem_getvalue=no"
+    "ac_cv_wchar_t_signed=yes"
+    "ac_cv_rshift_extends_sign=yes"
+    "ac_cv_broken_nice=no"
+    "ac_cv_broken_poll=no"
+    "ac_cv_working_tzset=yes"
+    "ac_cv_have_long_long_format=yes"
+    "ac_cv_have_size_t_format=yes"
+    "ac_cv_computed_gotos=yes"
+    "ac_cv_file__dev_ptmx=yes"
+    "ac_cv_file__dev_ptc=yes"
   ];
 
   preConfigure = ''
@@ -139,7 +163,7 @@ in stdenv.mkDerivation {
     for i in $out/lib/python${majorVersion}/_sysconfigdata*.py $out/lib/python${majorVersion}/config-${majorVersion}m*/Makefile; do
       sed -i $i -e "s|-I/nix/store/[^ ']*||g" -e "s|-L/nix/store/[^ ']*||g" -e "s|$TMPDIR|/no-such-path|g"
     done
-
+  '' + optionalString (stdenv.hostPlatform == stdenv.buildPlatform) ''
     # Determinism: rebuild all bytecode
     # We exclude lib2to3 because that's Python 2 code which fails
     # We rebuild three times, once for each optimization level
diff --git a/pkgs/development/interpreters/python/mk-python-derivation.nix b/pkgs/development/interpreters/python/mk-python-derivation.nix
index d9cff16f448f..96a9cdf0c615 100644
--- a/pkgs/development/interpreters/python/mk-python-derivation.nix
+++ b/pkgs/development/interpreters/python/mk-python-derivation.nix
@@ -5,7 +5,7 @@
 , wrapPython
 , setuptools
 , unzip
-, ensureNewerSourcesHook
+, ensureNewerSourcesForZipFilesHook
 # Whether the derivation provides a Python module or not.
 , toPythonModule
 , namePrefix
@@ -69,7 +69,7 @@ toPythonModule (python.stdenv.mkDerivation (builtins.removeAttrs attrs [
 
   name = namePrefix + name;
 
-  nativeBuildInputs = [ (ensureNewerSourcesHook { year = "1980"; }) ]
+  nativeBuildInputs = [ ensureNewerSourcesForZipFilesHook ]
     ++ nativeBuildInputs;
 
   buildInputs = [ wrapPython ]
diff --git a/pkgs/development/interpreters/racket/default.nix b/pkgs/development/interpreters/racket/default.nix
index 2397cce97eab..e3aa3e8a6f5c 100644
--- a/pkgs/development/interpreters/racket/default.nix
+++ b/pkgs/development/interpreters/racket/default.nix
@@ -4,6 +4,7 @@
 , libpng, libtool, mpfr, openssl, pango, poppler
 , readline, sqlite
 , disableDocs ? false
+, CoreFoundation
 }:
 
 let
@@ -35,16 +36,25 @@ stdenv.mkDerivation rec {
   name = "racket-${version}";
   version = "6.12";
 
-  src = fetchurl {
-    url = "https://mirror.racket-lang.org/installers/${version}/${name}-src.tgz";
+  src = (stdenv.lib.makeOverridable ({ name, sha256 }:
+    fetchurl rec {
+      url = "https://mirror.racket-lang.org/installers/${version}/${name}-src.tgz";
+      inherit sha256;
+    }
+  )) {
+    inherit name;
     sha256 = "0cwcypzjfl9py1s695mhqkiapff7c1w29llsmdj7qgn58wl0apk5";
   };
 
   FONTCONFIG_FILE = fontsConf;
   LD_LIBRARY_PATH = libPath;
-  NIX_LDFLAGS = stdenv.lib.optionalString stdenv.cc.isGNU "-lgcc_s";
+  NIX_LDFLAGS = stdenv.lib.concatStringsSep " " [
+    (stdenv.lib.optionalString (stdenv.cc.isGNU && ! stdenv.isDarwin) "-lgcc_s")
+    (stdenv.lib.optionalString stdenv.isDarwin "-framework CoreFoundation")
+  ];
 
-  buildInputs = [ fontconfig libffi libtool makeWrapper sqlite ];
+  buildInputs = [ fontconfig libffi libtool makeWrapper sqlite ]
+    ++ stdenv.lib.optionals stdenv.isDarwin [ CoreFoundation ];
 
   preConfigure = ''
     unset AR
diff --git a/pkgs/development/interpreters/racket/minimal.nix b/pkgs/development/interpreters/racket/minimal.nix
new file mode 100644
index 000000000000..c63d0040cfee
--- /dev/null
+++ b/pkgs/development/interpreters/racket/minimal.nix
@@ -0,0 +1,19 @@
+{ racket
+}:
+
+racket.overrideAttrs (oldAttrs: rec {
+  name = "racket-minimal-${oldAttrs.version}";
+  src = oldAttrs.src.override {
+    inherit name;
+    sha256 = "0c565jy2y3gjl5lncd5adjsrj8c24p4i062kphv26ni5q1nn5ip5";
+  };
+
+  meta = oldAttrs.meta // {
+    description = "Racket without bundled packages, such as Dr. Racket.";
+    longDescription = ''The essential package racket-libs is included,
+      as well as libraries that live in collections. In particular, raco
+      and the pkg library are still bundled.
+    '';
+    platforms = [ "x86_64-linux" "aarch64-linux" "x86_64-darwin" ];
+  };
+})
diff --git a/pkgs/development/interpreters/ruby/default.nix b/pkgs/development/interpreters/ruby/default.nix
index 9d82810900f0..4ebc488d9988 100644
--- a/pkgs/development/interpreters/ruby/default.nix
+++ b/pkgs/development/interpreters/ruby/default.nix
@@ -1,4 +1,5 @@
-{ stdenv, lib, fetchurl, fetchpatch, fetchFromSavannah, fetchFromGitHub
+{ stdenv, buildPackages, lib
+, fetchurl, fetchpatch, fetchFromSavannah, fetchFromGitHub
 , zlib, openssl, gdbm, ncurses, readline, groff, libyaml, libffi, autoreconfHook, bison
 , autoconf, darwin ? null
 , buildEnv, bundler, bundix, Foundation
@@ -22,6 +23,12 @@ let
   # Contains the ruby version heuristics
   rubyVersion = import ./ruby-version.nix { inherit lib; };
 
+  # Needed during postInstall
+  buildRuby =
+    if stdenv.hostPlatform == stdenv.buildPlatform
+    then "$out/bin/ruby"
+    else "${buildPackages.ruby}/bin/ruby";
+
   generic = { version, sha256 }: let
     ver = version;
     tag = ver.gitTag;
@@ -30,7 +37,8 @@ let
     isRuby25 = ver.majMin == "2.5";
     baseruby = self.override { useRailsExpress = false; };
     self = lib.makeOverridable (
-      { stdenv, lib, fetchurl, fetchpatch, fetchFromSavannah, fetchFromGitHub
+  { stdenv, buildPackages, lib
+      , fetchurl, fetchpatch, fetchFromSavannah, fetchFromGitHub
       , useRailsExpress ? true
       , zlib, zlibSupport ? true
       , openssl, opensslSupport ? true
@@ -65,9 +73,13 @@ let
             unpackdir rubySrc;
 
         # Have `configure' avoid `/usr/bin/nroff' in non-chroot builds.
-        NROFF = "${groff}/bin/nroff";
+        NROFF = if docSupport then "${groff}/bin/nroff" else null;
 
-        nativeBuildInputs = ops useRailsExpress [ autoreconfHook bison ];
+        nativeBuildInputs =
+             ops useRailsExpress [ autoreconfHook bison ]
+          ++ ops (stdenv.buildPlatform != stdenv.hostPlatform) [
+               buildPackages.ruby
+             ];
         buildInputs =
              (op fiddleSupport libffi)
           ++ (ops cursesSupport [ ncurses readline ])
@@ -87,8 +99,6 @@ let
 
         enableParallelBuilding = true;
 
-        hardeningDisable = lib.optional isRuby20 "format";
-
         patches =
           (import ./patchsets.nix {
             inherit patchSet useRailsExpress ops;
@@ -100,16 +110,9 @@ let
           pushd ${sourceRoot}/rubygems
           patch -p1 < ${rubygemsPatch}
           popd
-        '' + opString isRuby21 ''
-          rm "$sourceRoot/enc/unicode/name2ctype.h"
         '';
 
-        postPatch = if isRuby21 then ''
-          rm tool/config_files.rb
-          cp ${config}/config.guess tool/
-          cp ${config}/config.sub tool/
-        ''
-        else if isRuby25 then ''
+        postPatch = if isRuby25 then ''
           sed -i configure.ac -e '/config.guess/d'
           cp ${config}/config.guess tool/
           cp ${config}/config.sub tool/
@@ -129,21 +132,28 @@ let
             "--with-out-ext=tk"
             # on yosemite, "generating encdb.h" will hang for a very long time without this flag
             "--with-setjmp-type=setjmp"
-          ];
+          ]
+          ++ op (stdenv.hostPlatform != stdenv.buildPlatform)
+             "--with-baseruby=${buildRuby}";
+
+        preInstall = ''
+          # Ruby installs gems here itself now.
+          mkdir -pv "$out/${passthru.gemPath}"
+          export GEM_HOME="$out/${passthru.gemPath}"
+        '';
 
         installFlags = stdenv.lib.optionalString docSupport "install-doc";
         # Bundler tries to create this directory
         postInstall = ''
           # Update rubygems
           pushd rubygems
-          $out/bin/ruby setup.rb
+          ${buildRuby} setup.rb
           popd
 
           # Remove unnecessary groff reference from runtime closure, since it's big
           sed -i '/NROFF/d' $out/lib/ruby/*/*/rbconfig.rb
 
           # Bundler tries to create this directory
-          mkdir -pv $out/${passthru.gemPath}
           mkdir -p $out/nix-support
           cat > $out/nix-support/setup-hook <<EOF
           addGemPath() {
@@ -189,31 +199,7 @@ let
     ) args; in self;
 
 in {
-  ruby_2_0_0 = generic {
-    version = rubyVersion "2" "0" "0" "p648";
-    sha256 = {
-      src = "1y3n4c6xw2wki7pyjpq5zpbgxnw5i3jc8mcpj6rk7hs995mvv446";
-      git = "0ncjfq4hfqj9kcr8pbll6kypwnmcgs8w7l4466qqfyv7jj3yjd76";
-    };
-  };
-
-  ruby_2_1_10 = generic {
-    version = rubyVersion "2" "1" "10" "";
-    sha256 = {
-      src = "086x66w51lg41abjn79xb7f6xsryymkcc3nvakmkjnjyg96labpv";
-      git = "133phd5r5y0np5lc9nqif93l7yb13yd52aspyl6c46z5jhvhyvfi";
-    };
-  };
-
-  ruby_2_2_9 = generic {
-    version = rubyVersion "2" "2" "9" "";
-    sha256 = {
-      src = "19m1ximl7vcrsvq595dgrjh4yb6kar944095wbywqh7waiqcfirg";
-      git = "03qrjh55098wcqh2khxryzkzfqkznjrcdgwf27r2bgcycbg5ca5q";
-    };
-  };
-
-  ruby_2_3_6 = generic {
+  ruby_2_3 = generic {
     version = rubyVersion "2" "3" "6" "";
     sha256 = {
       src = "07jpa7fw1gyf069m7alf2b0zm53qm08w2ns45mhzmvgrg4r528l3";
@@ -221,7 +207,7 @@ in {
     };
   };
 
-  ruby_2_4_3 = generic {
+  ruby_2_4 = generic {
     version = rubyVersion "2" "4" "3" "";
     sha256 = {
       src = "161smb52q19r9lrzy22b3bhnkd0z8wjffm0qsfkml14j5ic7a0zx";
@@ -229,7 +215,7 @@ in {
     };
   };
 
-  ruby_2_5_0 = generic {
+  ruby_2_5 = generic {
     version = rubyVersion "2" "5" "0" "";
     sha256 = {
       src = "1azj0d2lzziw6iml7bx3sxpxzcdmfwfq3yhm7djyp20q1xiz7rj6";
diff --git a/pkgs/development/interpreters/ruby/patchsets.nix b/pkgs/development/interpreters/ruby/patchsets.nix
index 55f4a9ef237b..fc79761252f2 100644
--- a/pkgs/development/interpreters/ruby/patchsets.nix
+++ b/pkgs/development/interpreters/ruby/patchsets.nix
@@ -1,29 +1,6 @@
 { patchSet, useRailsExpress, ops, patchLevel }:
 
 rec {
-  "2.0.0" = [
-    ./ssl_v3.patch
-    ./rand-egd.patch
-  ] ++ ops useRailsExpress [
-    "${patchSet}/patches/ruby/2.0.0/p${patchLevel}/railsexpress/01-zero-broken-tests.patch"
-    "${patchSet}/patches/ruby/2.0.0/p${patchLevel}/railsexpress/02-railsexpress-gc.patch"
-    "${patchSet}/patches/ruby/2.0.0/p${patchLevel}/railsexpress/03-display-more-detailed-stack-trace.patch"
-    "${patchSet}/patches/ruby/2.0.0/p${patchLevel}/railsexpress/04-show-full-backtrace-on-stack-overflow.patch"
-  ];
-  "2.1.10" = [
-    ./rand-egd.patch
-  ] ++ ops useRailsExpress [
-    # 2.1.10 patchsets are not available, but 2.1.8 patchsets apply
-    "${patchSet}/patches/ruby/2.1.8/railsexpress/01-zero-broken-tests.patch"
-    "${patchSet}/patches/ruby/2.1.8/railsexpress/02-improve-gc-stats.patch"
-    "${patchSet}/patches/ruby/2.1.8/railsexpress/03-display-more-detailed-stack-trace.patch"
-    "${patchSet}/patches/ruby/2.1.8/railsexpress/04-show-full-backtrace-on-stack-overflow.patch"
-    "${patchSet}/patches/ruby/2.1.8/railsexpress/05-funny-falcon-stc-density.patch"
-    "${patchSet}/patches/ruby/2.1.8/railsexpress/06-funny-falcon-stc-pool-allocation.patch"
-    "${patchSet}/patches/ruby/2.1.8/railsexpress/07-aman-opt-aset-aref-str.patch"
-    "${patchSet}/patches/ruby/2.1.8/railsexpress/08-funny-falcon-method-cache.patch"
-    "${patchSet}/patches/ruby/2.1.8/railsexpress/09-heap-dump-support.patch"
-  ];
   "2.2.9" = ops useRailsExpress [
     "${patchSet}/patches/ruby/2.2/head/railsexpress/01-zero-broken-tests.patch"
     "${patchSet}/patches/ruby/2.2/head/railsexpress/02-improve-gc-stats.patch"
diff --git a/pkgs/development/interpreters/ruby/rand-egd.patch b/pkgs/development/interpreters/ruby/rand-egd.patch
deleted file mode 100644
index e4f6452000c2..000000000000
--- a/pkgs/development/interpreters/ruby/rand-egd.patch
+++ /dev/null
@@ -1,42 +0,0 @@
-diff --git a/ext/openssl/extconf.rb b/ext/openssl/extconf.rb
-index e272cba..3a1fa71 100644
---- a/ext/openssl/extconf.rb
-+++ b/ext/openssl/extconf.rb
-@@ -87,6 +87,7 @@
- have_func("PEM_def_callback")
- have_func("PKCS5_PBKDF2_HMAC")
- have_func("PKCS5_PBKDF2_HMAC_SHA1")
-+have_func("RAND_egd")
- have_func("X509V3_set_nconf")
- have_func("X509V3_EXT_nconf_nid")
- have_func("X509_CRL_add0_revoked")
-diff --git a/ext/openssl/ossl_rand.c b/ext/openssl/ossl_rand.c
-index 29cbf8c..27466fe 100644
---- a/ext/openssl/ossl_rand.c
-+++ b/ext/openssl/ossl_rand.c
-@@ -148,6 +148,7 @@ ossl_rand_pseudo_bytes(VALUE self, VALUE len)
-     return str;
- }
- 
-+#ifdef HAVE_RAND_EGD
- /*
-  *  call-seq:
-  *     egd(filename) -> true
-@@ -186,6 +187,7 @@ ossl_rand_egd_bytes(VALUE self, VALUE filename, VALUE len)
-     }
-     return Qtrue;
- }
-+#endif /* HAVE_RAND_EGD */
- 
- /*
-  *  call-seq:
-@@ -219,7 +221,9 @@ Init_ossl_rand(void)
-     DEFMETH(mRandom, "write_random_file", ossl_rand_write_file, 1);
-     DEFMETH(mRandom, "random_bytes", ossl_rand_bytes, 1);
-     DEFMETH(mRandom, "pseudo_bytes", ossl_rand_pseudo_bytes, 1);
-+#ifdef HAVE_RAND_EGD
-     DEFMETH(mRandom, "egd", ossl_rand_egd, 1);
-     DEFMETH(mRandom, "egd_bytes", ossl_rand_egd_bytes, 2);
-+#endif /* HAVE_RAND_EGD */
-     DEFMETH(mRandom, "status?", ossl_rand_status, 0)
- }
diff --git a/pkgs/development/interpreters/ruby/rubygems-src.nix b/pkgs/development/interpreters/ruby/rubygems-src.nix
index 99870e6ba2ca..cb36c96a4c52 100644
--- a/pkgs/development/interpreters/ruby/rubygems-src.nix
+++ b/pkgs/development/interpreters/ruby/rubygems-src.nix
@@ -1,6 +1,6 @@
 { fetchurl
-, version ? "2.6.13"
-, sha256 ? "1j98ww8cz9y4wwshg7p4i4acrmls3ywkyj1nlkh4k3bywwm50hfh"
+, version ? "2.7.6"
+, sha256 ? "1sqy6z1kngq91nxmv1hw4xhw1ycwx9s76hfbpcdlgkm9haji9xv7"
 }:
 fetchurl {
   url = "http://production.cf.rubygems.org/rubygems/rubygems-${version}.tgz";
diff --git a/pkgs/development/interpreters/ruby/ssl_v3.patch b/pkgs/development/interpreters/ruby/ssl_v3.patch
deleted file mode 100644
index faa402165751..000000000000
--- a/pkgs/development/interpreters/ruby/ssl_v3.patch
+++ /dev/null
@@ -1,16 +0,0 @@
---- a/ext/openssl/ossl_ssl.c  2015-11-26 16:41:03.775058140 +0000
-+++ b/ext/openssl/ossl_ssl.c  2015-11-26 16:40:56.191907346 +0000
-@@ -138,9 +138,12 @@
-     OSSL_SSL_METHOD_ENTRY(SSLv2_server),
-     OSSL_SSL_METHOD_ENTRY(SSLv2_client),
- #endif
-+#if defined(HAVE_SSLV3_METHOD) && defined(HAVE_SSLV3_SERVER_METHOD) && \
-+        defined(HAVE_SSLV3_CLIENT_METHOD)
-     OSSL_SSL_METHOD_ENTRY(SSLv3),
-     OSSL_SSL_METHOD_ENTRY(SSLv3_server),
-     OSSL_SSL_METHOD_ENTRY(SSLv3_client),
-+#endif
-     OSSL_SSL_METHOD_ENTRY(SSLv23),
-     OSSL_SSL_METHOD_ENTRY(SSLv23_server),
-     OSSL_SSL_METHOD_ENTRY(SSLv23_client),
-
diff --git a/pkgs/development/interpreters/spidermonkey/17.nix b/pkgs/development/interpreters/spidermonkey/17.nix
index da5fc193a222..9c47ebe79b6e 100644
--- a/pkgs/development/interpreters/spidermonkey/17.nix
+++ b/pkgs/development/interpreters/spidermonkey/17.nix
@@ -18,6 +18,16 @@ stdenv.mkDerivation rec {
 
   postUnpack = "sourceRoot=\${sourceRoot}/js/src";
 
+  patches = [
+    (fetchurl {
+      name = "jsoptparse-gcc7.patch";
+      url = "https://src.fedoraproject.org/cgit/rpms/mozjs17.git/plain/"
+          + "mozjs17.0.0-gcc7.patch?id=43b846629a299f";
+      sha256 = "17plyaq0jwf9wli4zlgvh4ri3zyk6nj1fiakh3wnd37nsl90raf9";
+    })
+  ];
+  patchFlags = "-p3";
+
   postPatch = ''
     # Fixes an issue with version detection under perl 5.22.x
     sed -i 's/(defined\((@TEMPLATE_FILE)\))/\1/' config/milestone.pl
diff --git a/pkgs/development/java-modules/build-maven-package.nix b/pkgs/development/java-modules/build-maven-package.nix
index b3c3e1732e0d..499b2c65b770 100644
--- a/pkgs/development/java-modules/build-maven-package.nix
+++ b/pkgs/development/java-modules/build-maven-package.nix
@@ -13,8 +13,8 @@ in stdenv.mkDerivation rec {
 
   propagatedBuildInput = [ maven ] ++ flatDeps;
 
-  find = ''find ${foldl' (x: y: x + " " + y) "" (map (x: x + "/m2") flatDeps)} -type d -printf '%P\n' | xargs -I {} mkdir -p $out/m2/{}'';
-  copy = ''cp -rsfu ${foldl' (x: y: x + " " + y) "" (map (x: x + "/m2/*") flatDeps)} $out/m2'';
+  find = ''find ${concatStringsSep " " (map (x: x + "/m2") flatDeps)} -type d -printf '%P\n' | xargs -I {} mkdir -p $out/m2/{}'';
+  copy = ''cp -rsfu ${concatStringsSep " " (map (x: x + "/m2/*") flatDeps)} $out/m2'';
 
   phases = [ "unpackPhase" "buildPhase" ];
 
diff --git a/pkgs/development/libraries/SDL/default.nix b/pkgs/development/libraries/SDL/default.nix
index e71ad14b11fd..82051854799c 100644
--- a/pkgs/development/libraries/SDL/default.nix
+++ b/pkgs/development/libraries/SDL/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, fetchpatch, pkgconfig, audiofile, libcap
+{ stdenv, fetchurl, fetchpatch, pkgconfig, audiofile, libcap, libiconv
 , openglSupport ? false, mesa_noglu, mesa_glu
 , alsaSupport ? true, alsaLib
 , x11Support ? hostPlatform == buildPlatform, libXext, libICE, libXrandr
@@ -40,7 +40,8 @@ stdenv.mkDerivation rec {
   buildInputs = let
     notMingw = !hostPlatform.isMinGW;
   in optional notMingw audiofile
-  ++ optionals stdenv.isDarwin [ OpenGL CoreAudio CoreServices AudioUnit Kernel ];
+  ++ optionals stdenv.isDarwin [ OpenGL CoreAudio CoreServices AudioUnit Kernel ]
+  ++ [ libiconv ];
 
   # XXX: By default, SDL wants to dlopen() PulseAudio, in which case
   # we must arrange to add it to its RPATH; however, `patchelf' seems
@@ -78,7 +79,7 @@ stdenv.mkDerivation rec {
     # Ticket: https://bugs.freedesktop.org/show_bug.cgi?id=27222
     (fetchpatch {
       name = "SDL_SetGamma.patch";
-      url = "http://pkgs.fedoraproject.org/cgit/rpms/SDL.git/plain/SDL-1.2.15-x11-Bypass-SetGammaRamp-when-changing-gamma.patch?id=04a3a7b1bd88c2d5502292fad27e0e02d084698d";
+      url = "http://src.fedoraproject.org/cgit/rpms/SDL.git/plain/SDL-1.2.15-x11-Bypass-SetGammaRamp-when-changing-gamma.patch?id=04a3a7b1bd88c2d5502292fad27e0e02d084698d";
       sha256 = "0x52s4328kilyq43i7psqkqg7chsfwh0aawr50j566nzd7j51dlv";
     })
     # Fix a build failure on OS X Mavericks
diff --git a/pkgs/development/libraries/SDL2/default.nix b/pkgs/development/libraries/SDL2/default.nix
index d75aea726e10..6b6c9599c282 100644
--- a/pkgs/development/libraries/SDL2/default.nix
+++ b/pkgs/development/libraries/SDL2/default.nix
@@ -8,6 +8,7 @@
 , ibusSupport ? false, ibus
 , pulseaudioSupport ? true, libpulseaudio
 , AudioUnit, Cocoa, CoreAudio, CoreServices, ForceFeedback, OpenGL
+, libiconv
 }:
 
 # OSS is no longer supported, for it's much crappier than ALSA and
@@ -41,7 +42,8 @@ stdenv.mkDerivation rec {
   # Since `libpulse*.la' contain `-lgdbm', PulseAudio must be propagated.
   propagatedBuildInputs = lib.optionals x11Support [ libICE libXi libXScrnSaver libXcursor libXinerama libXext libXrandr libXxf86vm ] ++
     lib.optionals waylandSupport [ wayland wayland-protocols libxkbcommon ] ++
-    lib.optional pulseaudioSupport libpulseaudio;
+    lib.optional pulseaudioSupport libpulseaudio
+    ++ [ libiconv ];
 
   buildInputs = [ audiofile ] ++
     lib.optional openglSupport mesa_noglu ++
diff --git a/pkgs/development/libraries/acl/default.nix b/pkgs/development/libraries/acl/default.nix
index dc9e4e6ff18b..3c6f42e5cbf8 100644
--- a/pkgs/development/libraries/acl/default.nix
+++ b/pkgs/development/libraries/acl/default.nix
@@ -20,13 +20,14 @@ stdenv.mkDerivation rec {
     sed -e '/^\/\//d' -i include/acl.h
   '';
 
-  configureFlags = "MAKE=make MSGFMT=msgfmt MSGMERGE=msgmerge XGETTEXT=xgettext ZIP=gzip ECHO=echo SED=sed AWK=gawk";
+  configureFlags = [ "MAKE=make" "MSGFMT=msgfmt" "MSGMERGE=msgmerge" "XGETTEXT=xgettext" "ZIP=gzip" "ECHO=echo" "SED=sed" "AWK=gawk" ];
 
-  installTargets = "install install-lib install-dev";
+  installTargets = [ "install" "install-lib" "install-dev" ];
 
-  meta = {
-    homepage = http://savannah.nongnu.org/projects/acl;
+  meta = with stdenv.lib; {
+    homepage = "http://savannah.nongnu.org/projects/acl";
     description = "Library and tools for manipulating access control lists";
-    platforms = stdenv.lib.platforms.linux;
+    platforms = platforms.linux;
+    license = licenses.gpl2Plus;
   };
 }
diff --git a/pkgs/development/libraries/appstream-glib/default.nix b/pkgs/development/libraries/appstream-glib/default.nix
index d177c3acfa71..dc5de2b382a1 100644
--- a/pkgs/development/libraries/appstream-glib/default.nix
+++ b/pkgs/development/libraries/appstream-glib/default.nix
@@ -1,30 +1,49 @@
-{ stdenv, fetchFromGitHub, pkgconfig, gettext, gtk3, glib
-, gtk_doc, libarchive, gobjectIntrospection
-, sqlite, libsoup, gcab, attr, acl, docbook_xsl
+{ stdenv, fetchFromGitHub, substituteAll, pkgconfig, gettext, gtk3, glib
+, gtk_doc, libarchive, gobjectIntrospection, libxslt, pngquant
+, sqlite, libsoup, gcab, attr, acl, docbook_xsl, docbook_xml_dtd_42
 , libuuid, json_glib, meson, gperf, ninja
 }:
 stdenv.mkDerivation rec {
-  name = "appstream-glib-0.7.2";
+  name = "appstream-glib-0.7.6";
+
+  outputs = [ "out" "dev" "man" ];
+  outputBin = "dev";
 
   src = fetchFromGitHub {
     owner = "hughsie";
     repo = "appstream-glib";
     rev = stdenv.lib.replaceStrings ["." "-"] ["_" "_"] name;
-    sha256 = "1jvwfida12d2snc8p9lpbpqzrixw2naaiwfmsrldwkrxsj3i19pl";
+    sha256 = "1nzm6w9n7fb2m06w88gwszaqf74bnip87ay0ca59wajq6y4mpfgv";
   };
 
-  nativeBuildInputs = [ meson pkgconfig ninja ];
-  buildInputs = [ glib gtk_doc gettext sqlite libsoup
-                  gcab attr acl docbook_xsl libuuid json_glib
-                  libarchive gobjectIntrospection gperf ];
+  nativeBuildInputs = [
+    meson pkgconfig ninja gtk_doc libxslt docbook_xsl docbook_xml_dtd_42
+  ];
+  buildInputs = [
+    glib gettext sqlite libsoup
+    gcab attr acl libuuid json_glib
+    libarchive gobjectIntrospection gperf
+  ];
   propagatedBuildInputs = [ gtk3 ];
-  mesonFlags = [ "-Denable-rpm=false" "-Denable-stemmer=false" "-Denable-dep11=false" ];
+
+  patches = [
+    (substituteAll {
+      src = ./paths.patch;
+      pngquant= "${pngquant}/bin/pngquant";
+    })
+  ];
+
+  mesonFlags = [
+    "-Drpm=false"
+    "-Dstemmer=false"
+    "-Ddep11=false"
+  ];
 
   meta = with stdenv.lib; {
     description = "Objects and helper methods to read and write AppStream metadata";
-    homepage    = https://github.com/hughsie/appstream-glib;
-    license     = licenses.lgpl21Plus;
-    platforms   = platforms.linux;
+    homepage = https://people.freedesktop.org/~hughsient/appstream-glib/;
+    license = licenses.lgpl2Plus;
+    platforms = platforms.linux;
     maintainers = with maintainers; [ lethalman matthewbauer ];
   };
 }
diff --git a/pkgs/development/libraries/appstream-glib/paths.patch b/pkgs/development/libraries/appstream-glib/paths.patch
new file mode 100644
index 000000000000..5c6396988a17
--- /dev/null
+++ b/pkgs/development/libraries/appstream-glib/paths.patch
@@ -0,0 +1,11 @@
+--- a/libappstream-builder/asb-utils.c
++++ b/libappstream-builder/asb-utils.c
+@@ -294,7 +294,7 @@
+ {
+ 	g_autofree gchar *standard_error = NULL;
+ 	gint exit_status = 0;
+-	const gchar *argv[] = { "/usr/bin/pngquant", "--skip-if-larger",
++	const gchar *argv[] = { "@pngquant@", "--skip-if-larger",
+ 				"--strip", "--ext", ".png",
+ 				"--force", "--speed", "1", filename, NULL };
+ 	if (!g_file_test (argv[0], G_FILE_TEST_IS_EXECUTABLE))
diff --git a/pkgs/development/libraries/appstream/default.nix b/pkgs/development/libraries/appstream/default.nix
index b79f274b9c3a..61ee182ce627 100644
--- a/pkgs/development/libraries/appstream/default.nix
+++ b/pkgs/development/libraries/appstream/default.nix
@@ -1,37 +1,55 @@
-{ stdenv, fetchFromGitHub, cmake, pkgconfig, gettext, intltool
-, xmlto, docbook_xsl, docbook_xml_dtd_45
-, glib, xapian, libxml2, libyaml, gobjectIntrospection
+{ stdenv, fetchpatch, fetchFromGitHub, meson, ninja, pkgconfig, gettext
+, xmlto, docbook_xsl, docbook_xml_dtd_45, libxslt
+, libstemmer, glib, xapian, libxml2, libyaml, gobjectIntrospection
 , pcre, itstool
 }:
 
 stdenv.mkDerivation rec {
   name = "appstream-${version}";
-  version = "0.10.6";
+  version = "0.11.8";
 
   src = fetchFromGitHub {
-    owner = "ximion";
-    repo = "appstream";
-    rev = "APPSTREAM_0_10_6";
-    sha256 = "1fg7zxx2qhkyj7fmcpwbf80b72d16kyi8dadi111kf00sgzfbiyy";
+    owner  = "ximion";
+    repo   = "appstream";
+    rev    = "APPSTREAM_${stdenv.lib.replaceStrings ["."] ["_"] version}";
+    sha256 = "07vzz57g1p5byj2jfg17y5n3il0g07d9wkiynzwra71mcxar1p08";
   };
 
+  patches = [
+    # drop this in version 0.11.9 and above
+    (fetchpatch {
+      name   = "define-location-and-soname.patch";
+      url    = "https://github.com/ximion/appstream/commit/3e58f9c9.patch";
+      sha256 = "1ffgbdfg80yq5vahjrvdd4f8xsp32ksm9vyasfmc7hzhx294s78w";
+    })
+  ];
+
   nativeBuildInputs = [
-    cmake pkgconfig gettext intltool
-    xmlto docbook_xsl docbook_xml_dtd_45
+    meson ninja pkgconfig gettext
+    libxslt xmlto docbook_xsl docbook_xml_dtd_45
     gobjectIntrospection itstool
   ];
 
-  buildInputs = [ pcre glib xapian libxml2 libyaml ];
+  buildInputs = [ libstemmer pcre glib xapian libxml2 libyaml ];
 
-  cmakeFlags = ''
-    -DSTEMMING=off
-    '';
+  prePatch = ''
+    substituteInPlace meson.build \
+      --replace /usr/include ${libstemmer}/include
+
+    substituteInPlace data/meson.build \
+      --replace /etc $out/etc
+  '';
+
+  mesonFlags = [
+    "-Dapidocs=false"
+    "-Ddocs=false"
+    "-Dgir=false"
+  ];
 
   meta = with stdenv.lib; {
     description = "Software metadata handling library";
     homepage    = https://www.freedesktop.org/wiki/Distributions/AppStream/;
-    longDescription =
-    ''
+    longDescription = ''
       AppStream is a cross-distro effort for building Software-Center applications
       and enhancing metadata provided by software components.  It provides
       specifications for meta-information which is shipped by upstream projects and
diff --git a/pkgs/development/libraries/appstream/qt.nix b/pkgs/development/libraries/appstream/qt.nix
new file mode 100644
index 000000000000..beff83f2365b
--- /dev/null
+++ b/pkgs/development/libraries/appstream/qt.nix
@@ -0,0 +1,25 @@
+{ stdenv, appstream, qtbase, qttools }:
+
+stdenv.mkDerivation rec {
+  name = "appstream-qt-${version}";
+  inherit (appstream) version src patches prePatch;
+
+  buildInputs = appstream.buildInputs ++ [ appstream qtbase ];
+
+  nativeBuildInputs = appstream.nativeBuildInputs ++ [ qttools ];
+
+  mesonFlags = appstream.mesonFlags ++ [ "-Dqt=true" ];
+
+  postInstall = ''
+    rm -rf $out/{bin,etc,include/appstream,lib/pkgconfig,lib/libappstream.so*,share}
+  '';
+
+  preFixup = ''
+    patchelf --add-needed ${appstream}/lib/libappstream.so.4 \
+      $out/lib/libAppStreamQt.so
+  '';
+
+  meta = appstream.meta // {
+    description = "Software metadata handling library - Qt";
+ };
+}
diff --git a/pkgs/development/libraries/aspell/default.nix b/pkgs/development/libraries/aspell/default.nix
index cccd93e5d4dd..d0e93337a390 100644
--- a/pkgs/development/libraries/aspell/default.nix
+++ b/pkgs/development/libraries/aspell/default.nix
@@ -1,5 +1,6 @@
-{stdenv, fetchurl, perl
-, searchNixProfiles ? true}:
+{ stdenv, fetchurl, fetchpatch, perl
+, searchNixProfiles ? true
+}:
 
 stdenv.mkDerivation rec {
   name = "aspell-0.60.6.1";
@@ -9,10 +10,16 @@ stdenv.mkDerivation rec {
     sha256 = "1qgn5psfyhbrnap275xjfrzppf5a83fb67gpql0kfqv37al869gm";
   };
 
-  patchPhase = ''
+  patches = [
+    (fetchpatch { # remove in >= 0.60.7
+      name = "gcc-7.patch";
+      url = "https://github.com/GNUAspell/aspell/commit/8089fa02122fed0a.diff";
+      sha256 = "1b3p1zy2lqr2fknddckm58hyk95hw4scf6hzjny1v9iaic2p37ix";
+    })
+  ] ++ stdenv.lib.optional searchNixProfiles ./data-dirs-from-nix-profiles.patch;
+
+  postPatch = ''
     patch interfaces/cc/aspell.h < ${./clang.patch}
-  '' + stdenv.lib.optionalString searchNixProfiles ''
-    patch -p1 < ${./data-dirs-from-nix-profiles.patch}
   '';
 
   nativeBuildInputs = [ perl ];
diff --git a/pkgs/development/libraries/aspell/dictionaries.nix b/pkgs/development/libraries/aspell/dictionaries.nix
index 8d97d6db2f1c..096ac80e5a70 100644
--- a/pkgs/development/libraries/aspell/dictionaries.nix
+++ b/pkgs/development/libraries/aspell/dictionaries.nix
@@ -1,32 +1,113 @@
-{stdenv, fetchurl, aspell, which}:
+{lib, stdenv, fetchurl, aspell, which}:
+
+with lib;
+
+/* HOWTO:
+
+   * Add some of these to your profile or systemPackages.
+
+     ~~~~
+     environment.systemPackages = [
+       aspell
+       aspellDicts.en
+       aspellDicts.en-computers
+       aspellDicts.en-science
+     ];
+     ~~~~
+
+   * Rebuild and switch to the new profile.
+   * Add something like
+
+     ~~~~
+     master en_US
+     extra-dicts en-computers.rws
+     add-extra-dicts en_US-science.rws
+     ~~~~
+
+     to `/etc/aspell.conf` or `~/.aspell.conf`.
+   * Check that `aspell -a` starts without errors.
+   * (optional) Check your config with `aspell dump config | grep -vE '^(#|$)'`.
+   * Enjoy.
+
+*/
 
 let
 
   /* Function to compile an Aspell dictionary.  Fortunately, they all
      build in the exact same way. */
   buildDict =
-    {shortName, fullName, src, postInstall ? ""}:
+    {shortName, fullName, ...}@args:
 
-    stdenv.mkDerivation {
+    stdenv.mkDerivation ({
       name = "aspell-dict-${shortName}";
 
-      inherit src;
-
       buildInputs = [aspell which];
 
       dontAddPrefix = true;
 
       preBuild = "makeFlagsArray=(dictdir=$out/lib/aspell datadir=$out/lib/aspell)";
 
-      inherit postInstall;
-
       meta = {
         description = "Aspell dictionary for ${fullName}";
         platforms = stdenv.lib.platforms.all;
-      };
-    };
-
-in {
+      } // (args.meta or {});
+    } // removeAttrs args [ "meta" ]);
+
+  /* Function to compile txt dict files into Aspell dictionaries. */
+  buildTxtDict =
+    {langInputs ? [], ...}@args:
+    buildDict ({
+      propagatedUserEnvPackages = langInputs;
+
+      preBuild = ''
+        # Aspell can't handle multiple data-dirs
+        # Copy everything we might possibly need
+        ${concatMapStringsSep "\n" (p: ''
+          cp -a ${p}/lib/aspell/* .
+        '') ([ aspell ] ++ langInputs)}
+        export ASPELL_CONF="data-dir $(pwd)"
+
+        aspell-create() {
+          target=$1
+          shift
+          echo building $target
+          aspell create "$@" master ./$target.rws
+        }
+
+        words-only() {
+          awk -F'\t' '{print $1}' | sort | uniq
+        }
+
+        # drop comments
+        aspell-affix() {
+          words-only \
+            | grep -v '#' \
+            | aspell-create "$@"
+        }
+
+        # Hack: drop comments and words with affixes
+        aspell-plain() {
+          words-only \
+            | grep -v '#' \
+            | grep -v '/' \
+            | aspell-create "$@"
+        }
+
+        aspell-install() {
+          install -d $out/lib/aspell
+          for a in "$@"; do
+            echo installing $a
+            install -t $out/lib/aspell $a.rws
+          done
+        }
+      '';
+
+      phases = [ "preBuild" "buildPhase" "installPhase" ];
+    } // args);
+
+in rec {
+
+  ### Languages
 
   ca = buildDict {
     shortName = "ca-2.1.5-1";
@@ -230,4 +311,53 @@ in {
     };
   };
 
+  ### Jargons
+
+  en-computers = buildTxtDict rec {
+    shortName = "en-computers";
+    fullName = "English Computer Jargon";
+
+    src = fetchurl {
+      url = https://mrsatterly.com/computer.dic;
+      sha256 = "1vzk7cdvcm9r1c6mgxpabrdcpvghdv9mjmnf6iq5wllcif5nsw2b";
+    };
+
+    langInputs = [ en ];
+
+    buildPhase = "cat $src | aspell-affix en-computers --dont-validate-words --lang=en";
+    installPhase = "aspell-install en-computers";
+
+    meta = {
+      homepage = https://mrsatterly.com/spelling.html;
+    };
+  };
+
+  en-science = buildTxtDict rec {
+    shortName = "en-science";
+    fullName = "English Scientific Jargon";
+
+    src1 = fetchurl {
+      url = http://jpetrie.net/wp-content/uploads/custom_scientific_US.txt;
+      sha256 = "1psqm094zl4prk2f8h18jv0d471hxykzd1zdnrlx7gzrzy6pz5r3";
+    };
+
+    src2 = fetchurl {
+      url = http://jpetrie.net/wp-content/uploads/custom_scientific_UK.txt;
+      sha256 = "17ss1sdr3k70zbyx2z9xf74345slrp41gbkpih8axrmg4x92fgm1";
+    };
+
+    langInputs = [ en ];
+
+    buildPhase = ''
+      cat $src1 | aspell-plain en_US-science --dont-validate-words --lang=en
+      cat $src2 | aspell-plain en_GB-science --dont-validate-words --lang=en
+    '';
+    installPhase = "aspell-install en_US-science en_GB-science";
+
+    meta = {
+      homepage = http://www.jpetrie.net/scientific-word-list-for-spell-checkersspelling-dictionaries/;
+    };
+
+  };
+
 }
diff --git a/pkgs/development/libraries/attr/default.nix b/pkgs/development/libraries/attr/default.nix
index 6a94cb0c0e23..0bfeaf81a81d 100644
--- a/pkgs/development/libraries/attr/default.nix
+++ b/pkgs/development/libraries/attr/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, gettext }:
+{ stdenv, fetchurl, gettext, hostPlatform }:
 
 stdenv.mkDerivation rec {
   name = "attr-2.4.47";
@@ -12,13 +12,16 @@ stdenv.mkDerivation rec {
 
   nativeBuildInputs = [ gettext ];
 
-  configureFlags = "MAKE=make MSGFMT=msgfmt MSGMERGE=msgmerge XGETTEXT=xgettext ECHO=echo SED=sed AWK=gawk";
+  configureFlags = [ "MAKE=make" "MSGFMT=msgfmt" "MSGMERGE=msgmerge" "XGETTEXT=xgettext" "ECHO=echo" "SED=sed" "AWK=gawk" ];
 
-  installTargets = "install install-lib install-dev";
+  installTargets = [ "install" "install-lib" "install-dev" ];
 
-  meta = {
-    homepage = http://savannah.nongnu.org/projects/attr/;
+  patches = if (hostPlatform.libc == "musl") then [ ./fix-headers-musl.patch ] else null;
+
+  meta = with stdenv.lib; {
+    homepage = "http://savannah.nongnu.org/projects/attr/";
     description = "Library and tools for manipulating extended attributes";
-    platforms = stdenv.lib.platforms.linux;
+    platforms = platforms.linux;
+    license = licenses.gpl2Plus;
   };
 }
diff --git a/pkgs/development/libraries/attr/fix-headers-musl.patch b/pkgs/development/libraries/attr/fix-headers-musl.patch
new file mode 100644
index 000000000000..e969f640eeef
--- /dev/null
+++ b/pkgs/development/libraries/attr/fix-headers-musl.patch
@@ -0,0 +1,54 @@
+--- attr-2.4.47/include/xattr.h
++++ attr-2.4.47/include/xattr.h
+@@ -31,33 +31,37 @@
+ #define XATTR_REPLACE 0x2       /* set value, fail if attr does not exist */
+ 
+ 
+-__BEGIN_DECLS
++#ifdef __cplusplus
++extern "C" {
++#endif
+ 
+ extern int setxattr (const char *__path, const char *__name,
+-		      const void *__value, size_t __size, int __flags) __THROW;
++		      const void *__value, size_t __size, int __flags);
+ extern int lsetxattr (const char *__path, const char *__name,
+-		      const void *__value, size_t __size, int __flags) __THROW;
++		      const void *__value, size_t __size, int __flags);
+ extern int fsetxattr (int __filedes, const char *__name,
+-		      const void *__value, size_t __size, int __flags) __THROW;
++		      const void *__value, size_t __size, int __flags);
+ 
+ extern ssize_t getxattr (const char *__path, const char *__name,
+-				void *__value, size_t __size) __THROW;
++				void *__value, size_t __size);
+ extern ssize_t lgetxattr (const char *__path, const char *__name,
+-				void *__value, size_t __size) __THROW;
++				void *__value, size_t __size);
+ extern ssize_t fgetxattr (int __filedes, const char *__name,
+-				void *__value, size_t __size) __THROW;
++				void *__value, size_t __size);
+ 
+ extern ssize_t listxattr (const char *__path, char *__list,
+-				size_t __size) __THROW;
++				size_t __size);
+ extern ssize_t llistxattr (const char *__path, char *__list,
+-				size_t __size) __THROW;
++				size_t __size);
+ extern ssize_t flistxattr (int __filedes, char *__list,
+-				size_t __size) __THROW;
++				size_t __size);
+ 
+-extern int removexattr (const char *__path, const char *__name) __THROW;
+-extern int lremovexattr (const char *__path, const char *__name) __THROW;
+-extern int fremovexattr (int __filedes,   const char *__name) __THROW;
++extern int removexattr (const char *__path, const char *__name);
++extern int lremovexattr (const char *__path, const char *__name);
++extern int fremovexattr (int __filedes,   const char *__name);
+ 
+-__END_DECLS
++#ifdef __cplusplus
++}
++#endif
+ 
+ #endif	/* __XATTR_H__ */
diff --git a/pkgs/development/libraries/aws-sdk-cpp/default.nix b/pkgs/development/libraries/aws-sdk-cpp/default.nix
index 47d9e7dba4ce..cd42652e091a 100644
--- a/pkgs/development/libraries/aws-sdk-cpp/default.nix
+++ b/pkgs/development/libraries/aws-sdk-cpp/default.nix
@@ -3,6 +3,7 @@
   apis ? ["*"]
 , # Whether to enable AWS' custom memory management.
   customMemoryManagement ? true
+, darwin
 }:
 
 let
@@ -29,10 +30,15 @@ in stdenv.mkDerivation rec {
   separateDebugInfo = stdenv.isLinux;
 
   nativeBuildInputs = [ cmake curl ];
-  buildInputs = [ zlib curl openssl ];
+  buildInputs = [ zlib curl openssl ]
+    ++ lib.optionals (stdenv.isDarwin &&
+                        ((builtins.elem "text-to-speech" apis) ||
+                         (builtins.elem "*" apis)))
+         (with darwin.apple_sdk.frameworks; [ CoreAudio AudioToolbox ]);
 
   cmakeFlags =
     lib.optional (!customMemoryManagement) "-DCUSTOM_MEMORY_MANAGEMENT=0"
+    ++ lib.optional (stdenv.buildPlatform != stdenv.hostPlatform) "-DENABLE_TESTING=OFF"
     ++ lib.optional (apis != ["*"])
       "-DBUILD_ONLY=${lib.concatStringsSep ";" apis}";
 
@@ -52,6 +58,8 @@ in stdenv.mkDerivation rec {
       rm aws-cpp-sdk-core-tests/aws/auth/AWSCredentialsProviderTest.cpp
     '';
 
+  NIX_CFLAGS_COMPILE = [ "-Wno-error=noexcept-type" ];
+
   meta = {
     description = "A C++ interface for Amazon Web Services";
     homepage = https://github.com/awslabs/aws-sdk-cpp;
diff --git a/pkgs/development/libraries/bctoolbox/default.nix b/pkgs/development/libraries/bctoolbox/default.nix
index 69faf913abfe..5439c7657e08 100644
--- a/pkgs/development/libraries/bctoolbox/default.nix
+++ b/pkgs/development/libraries/bctoolbox/default.nix
@@ -2,13 +2,13 @@
 stdenv.mkDerivation rec {
   name = "${baseName}-${version}";
   baseName = "bctoolbox";
-  version = "0.2.0";
+  version = "0.6.0";
   buildInputs = [cmake mbedtls bcunit srtp];
   src = fetchFromGitHub {
     owner = "BelledonneCommunications";
     repo = "${baseName}";
     rev = "${version}";
-    sha256 = "09mjqdfjxy4jy1z68b2i99hgkbnhhk7vnbfhj9sdpd1p3jk2ha33";
+    sha256 = "1cxx243wyzkd4xnvpyqf97n0rjhfckpvw1vhwnbwshq3q6fra909";
   };
 
   meta = {
diff --git a/pkgs/development/libraries/belcard/default.nix b/pkgs/development/libraries/belcard/default.nix
new file mode 100644
index 000000000000..8805dc74a26c
--- /dev/null
+++ b/pkgs/development/libraries/belcard/default.nix
@@ -0,0 +1,24 @@
+{ stdenv, fetchurl, cmake, fetchFromGitHub, bctoolbox, belr }:
+
+stdenv.mkDerivation rec {
+  baseName = "belcard";
+  version = "1.0.2";
+  name = "${baseName}-${version}";
+
+  src = fetchFromGitHub {
+    owner = "BelledonneCommunications";
+    repo = "${baseName}";
+    rev = "${version}";
+    sha256 = "1pwji83vpsdrfma24rnj3rz1x0a0g6zk3v4xjnip7zf2ys3zcnlk";
+  };
+
+  buildInputs = [ bctoolbox belr ];
+  nativeBuildInputs = [ cmake ];
+
+  meta = with stdenv.lib;{
+    description = "Belcard is a C++ library to manipulate VCard standard format";
+    homepage = https://github.com/BelledonneCommunications/belcard;
+    license = licenses.lgpl21;
+    platforms = platforms.all;
+  };
+}
diff --git a/pkgs/development/libraries/belle-sip/default.nix b/pkgs/development/libraries/belle-sip/default.nix
index b055b2358a54..003fce0ea8c3 100644
--- a/pkgs/development/libraries/belle-sip/default.nix
+++ b/pkgs/development/libraries/belle-sip/default.nix
@@ -4,14 +4,14 @@
 
 stdenv.mkDerivation rec {
   baseName = "belle-sip";
-  version = "1.5.0";
+  version = "1.6.3";
   name = "${baseName}-${version}";
 
   src = fetchFromGitHub {
     owner = "BelledonneCommunications";
     repo = "${baseName}";
     rev = "${version}";
-    sha256 = "0hnm64hwgq003wicz6c485fryjfhi820fgin8ndknq60kvwxsrzn";
+    sha256 = "0q70db1klvhca1af29bm9paka3gyii5hfbzrj4178gclsg7cj8fk";
   };
 
   nativeBuildInputs = [ jre cmake ];
diff --git a/pkgs/development/libraries/belr/default.nix b/pkgs/development/libraries/belr/default.nix
new file mode 100644
index 000000000000..214abb21f2cd
--- /dev/null
+++ b/pkgs/development/libraries/belr/default.nix
@@ -0,0 +1,24 @@
+{ stdenv, fetchurl, cmake, fetchFromGitHub, bctoolbox }:
+
+stdenv.mkDerivation rec {
+  baseName = "belr";
+  version = "0.1.3";
+  name = "${baseName}-${version}";
+
+  src = fetchFromGitHub {
+    owner = "BelledonneCommunications";
+    repo = "${baseName}";
+    rev = "${version}";
+    sha256 = "0mf8lsyq1z3b5p47c00lnwc8n7v9nzs1fd2g9c9hnz6fjd2ka44w";
+  };
+
+  buildInputs = [ bctoolbox ];
+  nativeBuildInputs = [ cmake ];
+
+  meta = with stdenv.lib;{
+    description = "Belr is Belledonne Communications' language recognition library";
+    homepage = https://github.com/BelledonneCommunications/belr;
+    license = licenses.lgpl21;
+    platforms = platforms.all;
+  };
+}
diff --git a/pkgs/development/libraries/boehm-gc/default.nix b/pkgs/development/libraries/boehm-gc/default.nix
index b79900288c97..d4e91deb7449 100644
--- a/pkgs/development/libraries/boehm-gc/default.nix
+++ b/pkgs/development/libraries/boehm-gc/default.nix
@@ -1,17 +1,17 @@
-{ lib, stdenv, fetchurl, pkgconfig, libatomic_ops, enableLargeConfig ? false
+{ lib, stdenv, fetchurl, fetchpatch, pkgconfig, libatomic_ops, enableLargeConfig ? false
 , buildPlatform, hostPlatform
 }:
 
 stdenv.mkDerivation rec {
   name = "boehm-gc-${version}";
-  version = "7.6.2";
+  version = "7.6.4";
 
   src = fetchurl {
     urls = [
       "http://www.hboehm.info/gc/gc_source/gc-${version}.tar.gz"
       "https://github.com/ivmai/bdwgc/releases/download/v${version}/gc-${version}.tar.gz"
     ];
-    sha256 = "07nli9hgdzc09qzw169sn7gchkrn5kqgyniv2rspcy1xaq2j04dx";
+    sha256 = "076dzsqqyxd3nlzs0z277vvhqjp8nv5dqi763s0m90zr6ljiyk5r";
   };
 
   buildInputs = [ libatomic_ops ];
@@ -20,9 +20,21 @@ stdenv.mkDerivation rec {
   outputs = [ "out" "dev" "doc" ];
   separateDebugInfo = stdenv.isLinux;
 
+  preConfigure = stdenv.lib.optionalString (stdenv.hostPlatform.libc == "musl") ''
+    export NIX_CFLAGS_COMPILE+="-D_GNU_SOURCE -DUSE_MMAP -DHAVE_DL_ITERATE_PHDR"
+  '';
+
+  patches = [ (fetchpatch {
+    url = "https://raw.githubusercontent.com/gentoo/musl/85b6a600996bdd71162b357e9ba93d8559342432/dev-libs/boehm-gc/files/boehm-gc-7.6.0-sys_select.patch";
+    sha256 = "1gydwlklvci30f5dpp5ccw2p2qpph5y41r55wx9idamjlq66fbb3";
+  }) ] ++
+    # https://github.com/ivmai/bdwgc/pull/208
+    lib.optional hostPlatform.isRiscV ./riscv.patch;
+
   configureFlags =
     [ "--enable-cplusplus" ]
-    ++ lib.optional enableLargeConfig "--enable-large-config";
+    ++ lib.optional enableLargeConfig "--enable-large-config"
+    ++ lib.optional (stdenv.hostPlatform.libc == "musl") "--disable-static";
 
   doCheck = true; # not cross;
 
diff --git a/pkgs/development/libraries/boehm-gc/riscv.patch b/pkgs/development/libraries/boehm-gc/riscv.patch
new file mode 100644
index 000000000000..249137d0a0dc
--- /dev/null
+++ b/pkgs/development/libraries/boehm-gc/riscv.patch
@@ -0,0 +1,53 @@
+diff --git a/include/private/gcconfig.h b/include/private/gcconfig.h
+index a8e55dd2..439cc88d 100644
+--- a/include/private/gcconfig.h
++++ b/include/private/gcconfig.h
+@@ -650,6 +650,15 @@
+ #   endif
+ #   define mach_type_known
+ # endif
++# if defined(__riscv) && defined(LINUX)
++#   if __riscv_xlen == 32
++#     define RISCV32
++#     define mach_type_known
++#   elif __riscv_xlen == 64
++#     define RISCV64
++#     define mach_type_known
++#   endif
++# endif
+ 
+ # if defined(SN_TARGET_PSP2)
+ #   define mach_type_known
+@@ -2970,6 +2979,32 @@
+ #   endif
+ # endif
+ 
++# ifdef RISCV32
++#   define CPP_WORDSZ 32
++#   define MACH_TYPE "RISC-V 32"
++#   define ALIGNMENT 4
++#   ifdef LINUX
++#     define OS_TYPE "LINUX"
++      extern int __data_start[];
++#     define DATASTART ((ptr_t)__data_start)
++#     define LINUX_STACKBOTTOM
++#     define DYNAMIC_LOADING
++#   endif
++# endif
++
++# ifdef RISCV64
++#   define CPP_WORDSZ 64
++#   define MACH_TYPE "RISC-V 64"
++#   define ALIGNMENT 8
++#   ifdef LINUX
++#     define OS_TYPE "LINUX"
++      extern int __data_start[];
++#     define DATASTART ((ptr_t)__data_start)
++#     define LINUX_STACKBOTTOM
++#     define DYNAMIC_LOADING
++#   endif
++# endif
++
+ #if defined(__GLIBC__) && !defined(DONT_USE_LIBC_PRIVATES)
+   /* Use glibc's stack-end marker. */
+ # define USE_LIBC_PRIVATES
diff --git a/pkgs/development/libraries/boost/generic.nix b/pkgs/development/libraries/boost/generic.nix
index c2a59431ac04..14ea512afbd2 100644
--- a/pkgs/development/libraries/boost/generic.nix
+++ b/pkgs/development/libraries/boost/generic.nix
@@ -144,7 +144,7 @@ stdenv.mkDerivation {
 
   postFixup = ''
     # Make boost header paths relative so that they are not runtime dependencies
-    find "$dev/include" \( -name '*.hpp' -or -name '*.h' -or -name '*.ipp' \) \
+    cd "$dev" && find include \( -name '*.hpp' -or -name '*.h' -or -name '*.ipp' \) \
       -exec sed '1i#line 1 "{}"' -i '{}' \;
   '' + optionalString (hostPlatform.libc == "msvcrt") ''
     $RANLIB "$out/lib/"*.a
diff --git a/pkgs/development/libraries/bzrtp/default.nix b/pkgs/development/libraries/bzrtp/default.nix
new file mode 100644
index 000000000000..cdc660ca3f32
--- /dev/null
+++ b/pkgs/development/libraries/bzrtp/default.nix
@@ -0,0 +1,24 @@
+{ stdenv, fetchurl, cmake, fetchFromGitHub, bctoolbox, sqlite }:
+
+stdenv.mkDerivation rec {
+  baseName = "bzrtp";
+  version = "1.0.6";
+  name = "${baseName}-${version}";
+
+  src = fetchFromGitHub {
+    owner = "BelledonneCommunications";
+    repo = "${baseName}";
+    rev = "${version}";
+    sha256 = "0438zzxp82bj5fmvqnwlljkgrz9ab5qm5lgpwwgmg1cp78bp2l45";
+  };
+
+  buildInputs = [ bctoolbox sqlite ];
+  nativeBuildInputs = [ cmake ];
+
+  meta = with stdenv.lib; {
+    description = "BZRTP is an opensource implementation of ZRTP keys exchange protocol";
+    homepage = https://github.com/BelledonneCommunications/bzrtp;
+    license = licenses.lgpl21;
+    platforms = platforms.all;
+  };
+}
diff --git a/pkgs/development/libraries/cpp-gsl/default.nix b/pkgs/development/libraries/cpp-gsl/default.nix
new file mode 100644
index 000000000000..ecd86354ee82
--- /dev/null
+++ b/pkgs/development/libraries/cpp-gsl/default.nix
@@ -0,0 +1,29 @@
+{ stdenv, fetchFromGitHub, cmake, catch }:
+
+stdenv.mkDerivation rec {
+  pname = "GSL-unstable";
+  version = "2017-02-15";
+  name = "${pname}-${version}";
+
+  src = fetchFromGitHub {
+    owner = "Microsoft";
+    repo = "GSL";
+    rev = "c87c123d1b3e64ae2cf725584f0c004da4d90f1c";
+    sha256 = "0h8py468bvxnydkjs352d7a9s8hk0ihc7msjkcnzj2d7nzp5nsc1";
+  };
+
+  nativeBuildInputs = [ cmake catch ];
+
+  meta = with stdenv.lib; {
+    homepage = https://github.com/Microsoft/GSL;
+    description = "C++ Core Guideline support library";
+    longDescription = ''
+     The Guideline Support Library (GSL) contains functions and types that are suggested for
+     use by the C++ Core Guidelines maintained by the Standard C++ Foundation.
+     This package contains Microsoft's implementation of GSL.
+    '';
+    platforms = stdenv.lib.platforms.unix;
+    license = licenses.mit;
+    maintainers = with maintainers; [ yuriaisaka ];
+  };
+}
diff --git a/pkgs/development/libraries/cutee/default.nix b/pkgs/development/libraries/cutee/default.nix
index eb19283caeaf..ba1d02380e29 100644
--- a/pkgs/development/libraries/cutee/default.nix
+++ b/pkgs/development/libraries/cutee/default.nix
@@ -19,7 +19,7 @@ stdenv.mkDerivation rec {
 
   meta = with stdenv.lib; {
     description = "C++ Unit Testing Easy Environment";
-    homepage    = http://codesink.org/cutee_unit_testing.html;
+    homepage    = http://www.codesink.org/cutee_unit_testing.html;
     license     = licenses.gpl2Plus;
     maintainers = with maintainers; [ leenaars];
     platforms = platforms.linux;
diff --git a/pkgs/development/libraries/dbus-cplusplus/default.nix b/pkgs/development/libraries/dbus-cplusplus/default.nix
index ee7afbbf2522..051405811438 100644
--- a/pkgs/development/libraries/dbus-cplusplus/default.nix
+++ b/pkgs/development/libraries/dbus-cplusplus/default.nix
@@ -10,11 +10,26 @@ stdenv.mkDerivation rec {
     sha256 = "0qafmy2i6dzx4n1dqp6pygyy6gjljnb7hwjcj2z11c1wgclsq4dw";
   };
 
-  patches = [( fetchurl {
-    url = http://sources.gentoo.org/cgi-bin/viewvc.cgi/gentoo-x86/dev-libs/dbus-c%2B%2B/files/dbus-c%2B%2B-0.9.0-gcc-4.7.patch;
-    name = "gcc-4.7.patch";
-    sha256 = "0rwcz9pvc13b3yfr0lkifnfz0vb5q6dg240bzgf37ni4s8rpc72g";
-  })];
+  patches = [
+    (fetchurl {
+      name = "gcc-4.7.patch";
+      url = "http://sources.gentoo.org/cgi-bin/viewvc.cgi/gentoo-x86/dev-libs/"
+          + "dbus-c%2B%2B/files/dbus-c%2B%2B-0.9.0-gcc-4.7.patch";
+      sha256 = "0rwcz9pvc13b3yfr0lkifnfz0vb5q6dg240bzgf37ni4s8rpc72g";
+    })
+    (fetchurl {
+      name = "writechar.patch"; # since gcc7
+      url = "https://src.fedoraproject.org/cgit/rpms/dbus-c++.git/plain/"
+          + "dbus-c++-writechar.patch?id=7f371172f5c";
+      sha256 = "1kkg4gbpm4hp87l25zw2a3r9c58g7vvgzcqgiman734i66zsbb9l";
+    })
+    (fetchurl {
+      name = "threading.patch"; # since gcc7
+      url = "https://src.fedoraproject.org/cgit/rpms/dbus-c++.git/plain/"
+          + "dbus-c++-threading.patch?id=7f371172f5c";
+      sha256 = "1h362anx3wyxm5lq0v8girmip1jmkdbijrmbrq7k5pp47zkhwwrq";
+    })
+  ];
 
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ dbus glib expat ];
diff --git a/pkgs/development/libraries/ffmpeg-full/default.nix b/pkgs/development/libraries/ffmpeg-full/default.nix
index 780008c95001..689b13a394dc 100644
--- a/pkgs/development/libraries/ffmpeg-full/default.nix
+++ b/pkgs/development/libraries/ffmpeg-full/default.nix
@@ -231,11 +231,11 @@ assert nvenc -> nvidia-video-sdk != null && nonfreeLicensing;
 
 stdenv.mkDerivation rec {
   name = "ffmpeg-full-${version}";
-  version = "3.4.1";
+  version = "3.4.2";
 
   src = fetchurl {
     url = "https://www.ffmpeg.org/releases/ffmpeg-${version}.tar.xz";
-    sha256 = "1h4iz7q10wj04awr2wvmp60n7b09pfwrgwbbw9sgl7klcf52fxss";
+    sha256 = "0h6prjn1ijkzzhkyj8mazp0wpx7m0n9ycadjxagf9czqirbyk4ib";
   };
 
   prePatch = ''
diff --git a/pkgs/development/libraries/ffmpeg/3.4.nix b/pkgs/development/libraries/ffmpeg/3.4.nix
index f4cda16424c3..98cbfdf43f6c 100644
--- a/pkgs/development/libraries/ffmpeg/3.4.nix
+++ b/pkgs/development/libraries/ffmpeg/3.4.nix
@@ -6,7 +6,7 @@
 
 callPackage ./generic.nix (args // rec {
   version = "${branch}";
-  branch = "3.4.1";
-  sha256 = "0b2aaxx8l7g3pvs4zd3mzig44cc73savrxzfm6w0lnaa2lh3wi7k";
+  branch = "3.4.2";
+  sha256 = "0nkq4451masmzlx3p4vprqwc0sl2iwqxbzjrngmvj29q4azp00zb";
   darwinFrameworks = [ Cocoa CoreMedia ];
 })
diff --git a/pkgs/development/libraries/fftw/default.nix b/pkgs/development/libraries/fftw/default.nix
index 36c824c75287..701209971074 100644
--- a/pkgs/development/libraries/fftw/default.nix
+++ b/pkgs/development/libraries/fftw/default.nix
@@ -29,7 +29,7 @@ stdenv.mkDerivation rec {
     # all x86_64 have sse2
     # however, not all float sizes fit
     ++ optional (stdenv.isx86_64 && (precision == "single" || precision == "double") )  "--enable-sse2"
-    ++ optional stdenv.cc.isGNU "--enable-openmp"
+    ++ optional (stdenv.cc.isGNU && !stdenv.hostPlatform.isMusl) "--enable-openmp"
     # doc generation causes Fortran wrapper generation which hard-codes gcc
     ++ optional (!withDoc) "--disable-doc";
 
diff --git a/pkgs/development/libraries/fontconfig/make-fonts-cache.nix b/pkgs/development/libraries/fontconfig/make-fonts-cache.nix
index 9aa1a905ec98..8b534edd2498 100644
--- a/pkgs/development/libraries/fontconfig/make-fonts-cache.nix
+++ b/pkgs/development/libraries/fontconfig/make-fonts-cache.nix
@@ -24,4 +24,8 @@ runCommand "fc-cache"
 
     mkdir -p $out
     fc-cache -sv
+
+    # This is not a cache dir in the normal sense -- it won't be automatically
+    # recreated.
+    rm "$out/CACHEDIR.TAG"
   ''
diff --git a/pkgs/development/libraries/gamin/default.nix b/pkgs/development/libraries/gamin/default.nix
index e6b1875a9e0c..2dd32b6f1100 100644
--- a/pkgs/development/libraries/gamin/default.nix
+++ b/pkgs/development/libraries/gamin/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, python, pkgconfig, glib }:
+{ stdenv, fetchurl, fetchpatch, python, pkgconfig, glib }:
 
 stdenv.mkDerivation (rec {
   name = "gamin-0.1.10";
@@ -18,7 +18,12 @@ stdenv.mkDerivation (rec {
 
   patches = [ ./deadlock.patch ]
     ++ map fetchurl (import ./debian-patches.nix)
-    ++ stdenv.lib.optional stdenv.cc.isClang ./returnval.patch;
+    ++ stdenv.lib.optional stdenv.cc.isClang ./returnval.patch
+    ++ stdenv.lib.optional stdenv.hostPlatform.isMusl (fetchpatch {
+      name = "fix-pthread-mutex.patch";
+      url = "https://git.alpinelinux.org/cgit/aports/plain/main/gamin/fix-pthread-mutex.patch?h=3.4-stable&id=a1a836b089573752c1b0da7d144c0948b04e8ea8";
+      sha256 = "13igdbqsxb3sz0h417k6ifmq2n4siwqspj6slhc7fdl5wd1fxmdz";
+    });
 
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/libraries/gcab/default.nix b/pkgs/development/libraries/gcab/default.nix
index 38a36fc4e546..0758d1252274 100644
--- a/pkgs/development/libraries/gcab/default.nix
+++ b/pkgs/development/libraries/gcab/default.nix
@@ -1,16 +1,24 @@
-{ stdenv, fetchurl, intltool, gobjectIntrospection, pkgconfig }:
+{ stdenv, fetchurl, gettext, gobjectIntrospection, pkgconfig, meson, ninja, glibcLocales, git, vala, glib, zlib }:
 
 stdenv.mkDerivation rec {
   name = "gcab-${version}";
-  version = "0.7";
+  version = "1.1";
+
+  LC_ALL = "en_US.UTF-8";
 
   src = fetchurl {
     url = "mirror://gnome/sources/gcab/${version}/${name}.tar.xz";
-    sha256 = "1vxdsiky3492zlyrym02sdwf09y19rl2z5h5iin7qm0wizw5wvm1";
+    sha256 = "0l19sr6pg0cfcddmi5n79d08mjjbhn427ip5jlsy9zddq9r24aqr";
   };
 
-  nativeBuildInputs = [ pkgconfig ];
-  buildInputs = [ intltool gobjectIntrospection ];
+  nativeBuildInputs = [ meson ninja glibcLocales git pkgconfig vala gettext gobjectIntrospection ];
+
+  buildInputs = [ glib zlib ];
+
+  mesonFlags = [
+    "-Ddocs=false"
+    "-Dtests=false"
+  ];
 
   meta = with stdenv.lib; {
     platforms = platforms.linux;
diff --git a/pkgs/development/libraries/geis/default.nix b/pkgs/development/libraries/geis/default.nix
index 6e043f5994df..5796425e4385 100644
--- a/pkgs/development/libraries/geis/default.nix
+++ b/pkgs/development/libraries/geis/default.nix
@@ -1,14 +1,20 @@
 { stdenv, fetchurl
 , pkgconfig
-, python3
+, python3Packages
+, wrapGAppsHook
+, atk
 , dbus_libs
 , evemu
 , frame
+, gdk_pixbuf
+, gobjectIntrospection
 , grail
+, gtk3
 , libX11
 , libXext
 , libXi
 , libXtst
+, pango
 , xorgserver
 }:
 
@@ -25,8 +31,23 @@ stdenv.mkDerivation rec {
 
   NIX_CFLAGS_COMPILE = "-Wno-format -Wno-misleading-indentation -Wno-error";
 
-  nativeBuildInputs = [ pkgconfig ];
-  buildInputs = [ python3 dbus_libs evemu frame grail libX11 libXext libXi libXtst xorgserver ];
+  pythonPath = with python3Packages;
+    [ pygobject3  ];
+
+  nativeBuildInputs = [ pkgconfig wrapGAppsHook python3Packages.wrapPython];
+  buildInputs = [ atk dbus_libs evemu frame gdk_pixbuf gobjectIntrospection grail
+    gtk3 libX11 libXext libXi libXtst pango python3Packages.python xorgserver
+  ];
+
+  patchPhase = ''
+    substituteInPlace python/geis/geis_v2.py --replace \
+      "ctypes.util.find_library(\"geis\")" "'$out/lib/libgeis.so'"
+  '';
+
+  preFixup = ''
+    buildPythonPath "$out $pythonPath"
+    gappsWrapperArgs+=(--set PYTHONPATH "$program_PYTHONPATH")
+  '';
 
   meta = {
     description = "A library for input gesture recognition";
diff --git a/pkgs/development/libraries/getdns/default.nix b/pkgs/development/libraries/getdns/default.nix
new file mode 100644
index 000000000000..382bdb17247c
--- /dev/null
+++ b/pkgs/development/libraries/getdns/default.nix
@@ -0,0 +1,41 @@
+{ stdenv, fetchurl, libtool, unbound, libidn, m4, file
+, openssl, doxygen, autoreconfHook, automake }:
+
+stdenv.mkDerivation rec {
+  pname = "getdns";
+  name = "${pname}-${version}";
+  version = "1.3.0";
+
+  src = fetchurl {
+    url = "https://getdnsapi.net/releases/${pname}-1-3-0/${pname}-${version}.tar.gz";
+    sha256 = "920fa2e07c72fd0e5854db1820fa777108009fc5cb702f9aa5155ef58b12adb1";
+  };
+
+  nativeBuildInputs = [ libtool m4 autoreconfHook automake file ];
+
+  buildInputs = [ unbound libidn openssl doxygen ];
+
+  patchPhase = ''
+    substituteInPlace m4/acx_openssl.m4 \
+      --replace /usr/local/ssl ${openssl.dev}
+    '';
+
+  meta = with stdenv.lib; {
+    description = "A modern asynchronous DNS API";
+    longDescription = ''
+      getdns is an implementation of a modern asynchronous DNS API; the
+      specification was originally edited by Paul Hoffman. It is intended to make all
+      types of DNS information easily available to application developers and non-DNS
+      experts. DNSSEC offers a unique global infrastructure for establishing and
+      enhancing cryptographic trust relations. With the development of this API the
+      developers intend to offer application developers a modern and flexible
+      interface that enables end-to-end trust in the DNS architecture, and which will
+      inspire application developers to implement innovative security solutions in
+      their applications.
+'';
+    homepage = https://getdnsapi.net;
+    maintainers = with maintainers; [ leenaars ];
+    license = licenses.bsd3;
+    platforms = platforms.all;
+  };
+}
diff --git a/pkgs/development/libraries/glibc/2.27.nix b/pkgs/development/libraries/glibc/2.27.nix
new file mode 100644
index 000000000000..bb057ae899e7
--- /dev/null
+++ b/pkgs/development/libraries/glibc/2.27.nix
@@ -0,0 +1,101 @@
+{ stdenv, callPackage
+, withLinuxHeaders ? true
+, installLocales ? true
+, profilingLibraries ? false
+, withGd ? false
+}:
+
+assert stdenv.cc.isGNU;
+
+callPackage ./common-2.27.nix { inherit stdenv; } {
+    name = "glibc" + stdenv.lib.optionalString withGd "-gd";
+
+    inherit withLinuxHeaders profilingLibraries installLocales withGd;
+
+    NIX_NO_SELF_RPATH = true;
+
+    postConfigure = ''
+      # Hack: get rid of the `-static' flag set by the bootstrap stdenv.
+      # This has to be done *after* `configure' because it builds some
+      # test binaries.
+      export NIX_CFLAGS_LINK=
+      export NIX_LDFLAGS_BEFORE=
+
+      export NIX_DONT_SET_RPATH=1
+      unset CFLAGS
+
+      # Apparently --bindir is not respected.
+      makeFlagsArray+=("bindir=$bin/bin" "sbindir=$bin/sbin" "rootsbindir=$bin/sbin")
+    '';
+
+    # The stackprotector and fortify hardening flags are autodetected by glibc
+    # and enabled by default if supported. Setting it for every gcc invocation
+    # does not work.
+    hardeningDisable = [ "stackprotector" "fortify" ];
+
+    # When building glibc from bootstrap-tools, we need libgcc_s at RPATH for
+    # any program we run, because the gcc will have been placed at a new
+    # store path than that determined when built (as a source for the
+    # bootstrap-tools tarball)
+    # Building from a proper gcc staying in the path where it was installed,
+    # libgcc_s will not be at {gcc}/lib, and gcc's libgcc will be found without
+    # any special hack.
+    preInstall = ''
+      if [ -f ${stdenv.cc.cc}/lib/libgcc_s.so.1 ]; then
+          mkdir -p $out/lib
+          cp ${stdenv.cc.cc}/lib/libgcc_s.so.1 $out/lib/libgcc_s.so.1
+          # the .so It used to be a symlink, but now it is a script
+          cp -a ${stdenv.cc.cc}/lib/libgcc_s.so $out/lib/libgcc_s.so
+      fi
+    '';
+
+    postInstall = ''
+      if test -n "$installLocales"; then
+          make -j''${NIX_BUILD_CORES:-1} -l''${NIX_BUILD_CORES:-1} localedata/install-locales
+      fi
+
+      test -f $out/etc/ld.so.cache && rm $out/etc/ld.so.cache
+
+      if test -n "$linuxHeaders"; then
+          # Include the Linux kernel headers in Glibc, except the `scsi'
+          # subdirectory, which Glibc provides itself.
+          (cd $dev/include && \
+           ln -sv $(ls -d $linuxHeaders/include/* | grep -v scsi\$) .)
+      fi
+
+      # Fix for NIXOS-54 (ldd not working on x86_64).  Make a symlink
+      # "lib64" to "lib".
+      if test -n "$is64bit"; then
+          ln -s lib $out/lib64
+      fi
+
+      # Get rid of more unnecessary stuff.
+      rm -rf $out/var $bin/bin/sln
+
+      # For some reason these aren't stripped otherwise and retain reference
+      # to bootstrap-tools; on cross-arm this stripping would break objects.
+      if [ -z "$crossConfig" ]; then
+        for i in "$out"/lib/*.a; do
+            [ "$i" = "$out/lib/libm.a" ] || strip -S "$i"
+        done
+      fi
+
+      # Put libraries for static linking in a separate output.  Note
+      # that libc_nonshared.a and libpthread_nonshared.a are required
+      # for dynamically-linked applications.
+      mkdir -p $static/lib
+      mv $out/lib/*.a $static/lib
+      mv $static/lib/lib*_nonshared.a $out/lib
+      # Some of *.a files are linker scripts where moving broke the paths.
+      sed "/^GROUP/s|$out/lib/lib|$static/lib/lib|g" \
+        -i "$static"/lib/*.a
+
+      # Work around a Nix bug: hard links across outputs cause a build failure.
+      cp $bin/bin/getconf $bin/bin/getconf_
+      mv $bin/bin/getconf_ $bin/bin/getconf
+    '';
+
+    separateDebugInfo = true;
+
+    meta.description = "The GNU C Library";
+  }
diff --git a/pkgs/development/libraries/glibc/common-2.27.nix b/pkgs/development/libraries/glibc/common-2.27.nix
new file mode 100644
index 000000000000..6c443ebbb932
--- /dev/null
+++ b/pkgs/development/libraries/glibc/common-2.27.nix
@@ -0,0 +1,210 @@
+/* Build configuration used to build glibc, Info files, and locale
+   information.  */
+
+{ stdenv, lib
+, buildPlatform, hostPlatform
+, buildPackages
+, fetchurl
+, linuxHeaders ? null
+, gd ? null, libpng ? null
+, bison
+}:
+
+{ name
+, withLinuxHeaders ? false
+, profilingLibraries ? false
+, installLocales ? false
+, withGd ? false
+, meta
+, ...
+} @ args:
+
+let
+  version = "2.27";
+  patchSuffix = "";
+  sha256 = "0wpwq7gsm7sd6ysidv0z575ckqdg13cr2njyfgrbgh4f65adwwji";
+  cross = if buildPlatform != hostPlatform then hostPlatform else null;
+in
+
+assert withLinuxHeaders -> linuxHeaders != null;
+assert withGd -> gd != null && libpng != null;
+
+stdenv.mkDerivation ({
+  inherit  installLocales;
+  linuxHeaders = if withLinuxHeaders then linuxHeaders else null;
+
+  # The host/target system.
+  crossConfig = if cross != null then cross.config else null;
+
+  inherit (stdenv) is64bit;
+
+  enableParallelBuilding = true;
+
+  patches =
+    [
+      /* Have rpcgen(1) look for cpp(1) in $PATH.  */
+      ./rpcgen-path.patch
+
+      /* Allow NixOS and Nix to handle the locale-archive. */
+      ./nix-locale-archive-2.27.patch
+
+      /* Don't use /etc/ld.so.cache, for non-NixOS systems.  */
+      ./dont-use-system-ld-so-cache-2.27.patch
+
+      /* Don't use /etc/ld.so.preload, but /etc/ld-nix.so.preload.  */
+      ./dont-use-system-ld-so-preload.patch
+
+      /* The command "getconf CS_PATH" returns the default search path
+         "/bin:/usr/bin", which is inappropriate on NixOS machines. This
+         patch extends the search path by "/run/current-system/sw/bin". */
+      ./fix_path_attribute_in_getconf.patch
+
+      /* Allow running with RHEL 6 -like kernels.  The patch adds an exception
+        for glibc to accept 2.6.32 and to tag the ELFs as 2.6.32-compatible
+        (otherwise the loader would refuse libc).
+        Note that glibc will fully work only on their heavily patched kernels
+        and we lose early mismatch detection on 2.6.32.
+
+        On major glibc updates we should check that the patched kernel supports
+        all the required features.  ATM it's verified up to glibc-2.26-131.
+        # HOWTO: check glibc sources for changes in kernel requirements
+        git log -p glibc-2.25.. sysdeps/unix/sysv/linux/x86_64/kernel-features.h sysdeps/unix/sysv/linux/kernel-features.h
+        # get kernel sources (update the URL)
+        mkdir tmp && cd tmp
+        curl http://vault.centos.org/6.9/os/Source/SPackages/kernel-2.6.32-696.el6.src.rpm | rpm2cpio - | cpio -idmv
+        tar xf linux-*.bz2
+        # check syscall presence, for example
+        less linux-*?/arch/x86/kernel/syscall_table_32.S
+       */
+      ./allow-kernel-2.6.32.patch
+    ]
+    ++ lib.optional stdenv.isx86_64 ./fix-x64-abi.patch;
+
+  postPatch =
+    ''
+      # Needed for glibc to build with the gnumake 3.82
+      # http://comments.gmane.org/gmane.linux.lfs.support/31227
+      sed -i 's/ot \$/ot:\n\ttouch $@\n$/' manual/Makefile
+
+      # nscd needs libgcc, and we don't want it dynamically linked
+      # because we don't want it to depend on bootstrap-tools libs.
+      echo "LDFLAGS-nscd += -static-libgcc" >> nscd/Makefile
+    '';
+
+  configureFlags =
+    [ "-C"
+      "--enable-add-ons"
+      "--enable-obsolete-nsl"
+      "--enable-obsolete-rpc"
+      "--sysconfdir=/etc"
+      "--enable-stackguard-randomization"
+      (if withLinuxHeaders
+       then "--with-headers=${linuxHeaders}/include"
+       else "--without-headers")
+      (if profilingLibraries
+       then "--enable-profile"
+       else "--disable-profile")
+    ] ++ lib.optionals withLinuxHeaders [
+      "--enable-kernel=3.2.0" # can't get below with glibc >= 2.26
+    ] ++ lib.optionals (cross != null) [
+      (if cross ? float && cross.float == "soft" then "--without-fp" else "--with-fp")
+    ] ++ lib.optionals (cross != null) [
+      "--with-__thread"
+    ] ++ lib.optionals (cross == null && stdenv.isArm) [
+      "--host=arm-linux-gnueabi"
+      "--build=arm-linux-gnueabi"
+
+      # To avoid linking with -lgcc_s (dynamic link)
+      # so the glibc does not depend on its compiler store path
+      "libc_cv_as_needed=no"
+    ] ++ lib.optional withGd "--with-gd";
+
+  installFlags = [ "sysconfdir=$(out)/etc" ];
+
+  outputs = [ "out" "bin" "dev" "static" ];
+
+  depsBuildBuild = [ buildPackages.stdenv.cc ];
+  nativeBuildInputs = [ bison ];
+  buildInputs = lib.optionals withGd [ gd libpng ];
+
+  # Needed to install share/zoneinfo/zone.tab.  Set to impure /bin/sh to
+  # prevent a retained dependency on the bootstrap tools in the stdenv-linux
+  # bootstrap.
+  BASH_SHELL = "/bin/sh";
+}
+
+// (removeAttrs args [ "withLinuxHeaders" "withGd" ]) //
+
+{
+  name = name + "-${version}${patchSuffix}";
+
+  src = fetchurl {
+    url = "mirror://gnu/glibc/glibc-${version}.tar.xz";
+    inherit sha256;
+  };
+
+  # Remove absolute paths from `configure' & co.; build out-of-tree.
+  preConfigure = ''
+    export PWD_P=$(type -tP pwd)
+    for i in configure io/ftwtest-sh; do
+        # Can't use substituteInPlace here because replace hasn't been
+        # built yet in the bootstrap.
+        sed -i "$i" -e "s^/bin/pwd^$PWD_P^g"
+    done
+
+    mkdir ../build
+    cd ../build
+
+    configureScript="`pwd`/../$sourceRoot/configure"
+
+    ${lib.optionalString (stdenv.cc.libc != null)
+      ''makeFlags="$makeFlags BUILD_LDFLAGS=-Wl,-rpath,${stdenv.cc.libc}/lib"''
+    }
+
+
+  '' + lib.optionalString (cross != null) ''
+    sed -i s/-lgcc_eh//g "../$sourceRoot/Makeconfig"
+
+    cat > config.cache << "EOF"
+    libc_cv_forced_unwind=yes
+    libc_cv_c_cleanup=yes
+    libc_cv_gnu89_inline=yes
+    EOF
+  '';
+
+  preBuild = lib.optionalString withGd "unset NIX_DONT_SET_RPATH";
+
+  meta = {
+    homepage = http://www.gnu.org/software/libc/;
+    description = "The GNU C Library";
+
+    longDescription =
+      '' Any Unix-like operating system needs a C library: the library which
+         defines the "system calls" and other basic facilities such as
+         open, malloc, printf, exit...
+
+         The GNU C library is used as the C library in the GNU system and
+         most systems with the Linux kernel.
+      '';
+
+    license = lib.licenses.lgpl2Plus;
+
+    maintainers = [ lib.maintainers.eelco ];
+    platforms = lib.platforms.linux;
+  } // meta;
+
+  passthru = { inherit version; };
+}
+
+// lib.optionalAttrs (cross != null) {
+  preInstall = null; # clobber the native hook
+
+  dontStrip = true;
+
+  separateDebugInfo = false; # this is currently broken for crossDrv
+
+  # To avoid a dependency on the build system 'bash'.
+  preFixup = ''
+    rm -f $bin/bin/{ldd,tzselect,catchsegv,xtrace}
+  '';
+})
diff --git a/pkgs/development/libraries/glibc/common.nix b/pkgs/development/libraries/glibc/common.nix
index b17d4effb1eb..d40733adf874 100644
--- a/pkgs/development/libraries/glibc/common.nix
+++ b/pkgs/development/libraries/glibc/common.nix
@@ -222,6 +222,6 @@ stdenv.mkDerivation ({
 
   # To avoid a dependency on the build system 'bash'.
   preFixup = ''
-    rm $bin/bin/{ldd,tzselect,catchsegv,xtrace}
+    rm -f $bin/bin/{ldd,tzselect,catchsegv,xtrace}
   '';
 })
diff --git a/pkgs/development/libraries/glibc/dont-use-system-ld-so-cache-2.27.patch b/pkgs/development/libraries/glibc/dont-use-system-ld-so-cache-2.27.patch
new file mode 100644
index 000000000000..f84b1049adf8
--- /dev/null
+++ b/pkgs/development/libraries/glibc/dont-use-system-ld-so-cache-2.27.patch
@@ -0,0 +1,46 @@
+diff -Naur glibc-2.27-orig/elf/ldconfig.c glibc-2.27/elf/ldconfig.c
+--- glibc-2.27-orig/elf/ldconfig.c	2018-02-01 11:17:18.000000000 -0500
++++ glibc-2.27/elf/ldconfig.c	2018-02-17 22:43:17.232175182 -0500
+@@ -51,7 +51,7 @@
+ #endif
+ 
+ #ifndef LD_SO_CONF
+-# define LD_SO_CONF SYSCONFDIR "/ld.so.conf"
++# define LD_SO_CONF PREFIX "/etc/ld.so.conf"
+ #endif
+ 
+ /* Get libc version number.  */
+diff -Naur glibc-2.27-orig/elf/Makefile glibc-2.27/elf/Makefile
+--- glibc-2.27-orig/elf/Makefile	2018-02-01 11:17:18.000000000 -0500
++++ glibc-2.27/elf/Makefile	2018-02-17 22:44:50.334006750 -0500
+@@ -559,13 +559,13 @@
+ 
+ $(objpfx)ldconfig: $(ldconfig-modules:%=$(objpfx)%.o)
+ 
+-SYSCONF-FLAGS := -D'SYSCONFDIR="$(sysconfdir)"'
+-CFLAGS-ldconfig.c += $(SYSCONF-FLAGS) -D'LIBDIR="$(libdir)"' \
++PREFIX-FLAGS := -D'PREFIX="$(prefix)"'
++CFLAGS-ldconfig.c += $(PREFIX-FLAGS) -D'LIBDIR="$(libdir)"' \
+ 		    -D'SLIBDIR="$(slibdir)"'
+ libof-ldconfig = ldconfig
+-CFLAGS-dl-cache.c += $(SYSCONF-FLAGS)
+-CFLAGS-cache.c += $(SYSCONF-FLAGS)
+-CFLAGS-rtld.c += $(SYSCONF-FLAGS)
++CFLAGS-dl-cache.c += $(PREFIX-FLAGS)
++CFLAGS-cache.c += $(PREFIX-FLAGS)
++CFLAGS-rtld.c += $(PREFIX-FLAGS)
+ 
+ cpp-srcs-left := $(all-rtld-routines:=.os)
+ lib := rtld
+diff -Naur glibc-2.27-orig/sysdeps/generic/dl-cache.h glibc-2.27/sysdeps/generic/dl-cache.h
+--- glibc-2.27-orig/sysdeps/generic/dl-cache.h	2018-02-01 11:17:18.000000000 -0500
++++ glibc-2.27/sysdeps/generic/dl-cache.h	2018-02-17 22:45:20.471598816 -0500
+@@ -28,7 +28,7 @@
+ #endif
+ 
+ #ifndef LD_SO_CACHE
+-# define LD_SO_CACHE SYSCONFDIR "/ld.so.cache"
++# define LD_SO_CACHE PREFIX "/etc/ld.so.cache"
+ #endif
+ 
+ #ifndef add_system_dir
diff --git a/pkgs/development/libraries/glibc/locales.nix b/pkgs/development/libraries/glibc/locales.nix
index debd7b39c86a..7090c5ceceec 100644
--- a/pkgs/development/libraries/glibc/locales.nix
+++ b/pkgs/development/libraries/glibc/locales.nix
@@ -6,7 +6,7 @@
    https://sourceware.org/git/?p=glibc.git;a=blob;f=localedata/SUPPORTED
 */
 
-{ stdenv, callPackage, writeText
+{ stdenv, buildPackages, callPackage, writeText
 , allLocales ? true, locales ? [ "en_US.UTF-8/UTF-8" ]
 }:
 
@@ -26,7 +26,7 @@ callPackage ./common.nix { inherit stdenv; } {
   # $TMPDIR/nix/store/...-glibc-.../lib/locale/locale-archive.
   buildPhase =
     ''
-      mkdir -p $TMPDIR/"${stdenv.cc.libc.out}/lib/locale"
+      mkdir -p $TMPDIR/"${buildPackages.stdenv.cc.libc.out}/lib/locale"
 
       # Hack to allow building of the locales (needed since glibc-2.12)
       sed -i -e 's,^$(rtld-prefix) $(common-objpfx)locale/localedef,localedef --prefix='$TMPDIR',' ../glibc-2*/localedata/Makefile
diff --git a/pkgs/development/libraries/glibc/nix-locale-archive-2.27.patch b/pkgs/development/libraries/glibc/nix-locale-archive-2.27.patch
new file mode 100644
index 000000000000..1b3590db4fdd
--- /dev/null
+++ b/pkgs/development/libraries/glibc/nix-locale-archive-2.27.patch
@@ -0,0 +1,118 @@
+diff -Naur glibc-2.27-orig/locale/loadarchive.c glibc-2.27/locale/loadarchive.c
+--- glibc-2.27-orig/locale/loadarchive.c	2018-02-01 11:17:18.000000000 -0500
++++ glibc-2.27/locale/loadarchive.c	2018-02-17 22:32:25.680169462 -0500
+@@ -123,6 +123,23 @@
+   return MAX (namehash_end, MAX (string_end, locrectab_end));
+ }
+ 
++static int
++open_locale_archive (void)
++{
++  int fd = -1;
++  char *versioned_path = getenv ("LOCAL_ARCHIVE_2_27");
++  char *path = getenv ("LOCAL_ARCHIVE");
++  if (versioned_path)
++    fd = __open_nocancel (versioned_path, O_RDONLY|O_LARGEFILE|O_CLOEXEC);
++  if (path && fd < 0)
++    fd = __open_nocancel (path, O_RDONLY|O_LARGEFILE|O_CLOEXEC);
++  if (fd < 0)
++    fd = __open_nocancel (archfname, O_RDONLY|O_LARGEFILE|O_CLOEXEC);
++  if (fd < 0)
++    fd = __open_nocancel ("/usr/lib/locale/locale-archive", O_RDONLY|O_LARGEFILE|O_CLOEXEC);
++  return fd;
++}
++
+ 
+ /* Find the locale *NAMEP in the locale archive, and return the
+    internalized data structure for its CATEGORY data.  If this locale has
+@@ -202,7 +219,7 @@
+       archmapped = &headmap;
+ 
+       /* The archive has never been opened.  */
+-      fd = __open_nocancel (archfname, O_RDONLY|O_LARGEFILE|O_CLOEXEC);
++      fd = open_locale_archive ();
+       if (fd < 0)
+ 	/* Cannot open the archive, for whatever reason.  */
+ 	return NULL;
+@@ -397,8 +414,7 @@
+ 	  if (fd == -1)
+ 	    {
+ 	      struct stat64 st;
+-	      fd = __open_nocancel (archfname,
+-				    O_RDONLY|O_LARGEFILE|O_CLOEXEC);
++	      fd = open_locale_archive ();
+ 	      if (fd == -1)
+ 		/* Cannot open the archive, for whatever reason.  */
+ 		return NULL;
+diff -Naur glibc-2.27-orig/locale/programs/locale.c glibc-2.27/locale/programs/locale.c
+--- glibc-2.27-orig/locale/programs/locale.c	2018-02-01 11:17:18.000000000 -0500
++++ glibc-2.27/locale/programs/locale.c	2018-02-17 22:36:39.726293213 -0500
+@@ -633,6 +633,24 @@
+ 
+ 
+ static int
++open_locale_archive (void)
++{
++  int fd = -1;
++  char *versioned_path = getenv ("LOCAL_ARCHIVE_2_27");
++  char *path = getenv ("LOCAL_ARCHIVE");
++  if (versioned_path)
++    fd = open64 (versioned_path, O_RDONLY);
++  if (path && fd < 0)
++    fd = open64 (path, O_RDONLY);
++  if (fd < 0)
++    fd = open64 (ARCHIVE_NAME, O_RDONLY);
++  if (fd < 0)
++    fd = open64 ("/usr/lib/locale/locale-archive", O_RDONLY);
++  return fd;
++}
++
++
++static int
+ write_archive_locales (void **all_datap, char *linebuf)
+ {
+   struct stat64 st;
+@@ -644,7 +662,7 @@
+   int fd, ret = 0;
+   uint32_t cnt;
+ 
+-  fd = open64 (ARCHIVE_NAME, O_RDONLY);
++  fd = open_locale_archive ();
+   if (fd < 0)
+     return 0;
+ 
+diff -Naur glibc-2.27-orig/locale/programs/locarchive.c glibc-2.27/locale/programs/locarchive.c
+--- glibc-2.27-orig/locale/programs/locarchive.c	2018-02-01 11:17:18.000000000 -0500
++++ glibc-2.27/locale/programs/locarchive.c	2018-02-17 22:40:51.245293975 -0500
+@@ -117,6 +117,22 @@
+ }
+ 
+ 
++static int
++open_locale_archive (const char * archivefname, int flags)
++{
++  int fd = -1;
++  char *versioned_path = getenv ("LOCAL_ARCHIVE_2_27");
++  char *path = getenv ("LOCAL_ARCHIVE");
++  if (versioned_path)
++    fd = open64 (versioned_path, flags);
++  if (path && fd < 0)
++    fd = open64 (path, flags);
++  if (fd < 0)
++    fd = open64 (archivefname, flags);
++  return fd;
++}
++
++
+ static void
+ create_archive (const char *archivefname, struct locarhandle *ah)
+ {
+@@ -578,7 +594,7 @@
+   while (1)
+     {
+       /* Open the archive.  We must have exclusive write access.  */
+-      fd = open64 (archivefname, readonly ? O_RDONLY : O_RDWR);
++      fd = open_locale_archive (archivefname, readonly ? O_RDONLY : O_RDWR);
+       if (fd == -1)
+ 	{
+ 	  /* Maybe the file does not yet exist? If we are opening
diff --git a/pkgs/development/libraries/gnutls-kdh/generic.nix b/pkgs/development/libraries/gnutls-kdh/generic.nix
index 0e8457a8c54b..e7e0672490d0 100644
--- a/pkgs/development/libraries/gnutls-kdh/generic.nix
+++ b/pkgs/development/libraries/gnutls-kdh/generic.nix
@@ -84,7 +84,7 @@ stdenv.mkDerivation {
        layer. It adds TLS-KDH ciphers: Kerberos + Diffie-Hellman.
     '';
 
-    homepage = http://www.gnu.org/software/gnutls://github.com/arpa2/gnutls-kdh;
+    homepage = https://github.com/arpa2/gnutls-kdh;
     license = licenses.lgpl21Plus;
     maintainers = with maintainers; [ leenaars ];
     platforms = platforms.all;
diff --git a/pkgs/development/libraries/granite/default.nix b/pkgs/development/libraries/granite/default.nix
index 4e41545687a9..8243775c6bc1 100644
--- a/pkgs/development/libraries/granite/default.nix
+++ b/pkgs/development/libraries/granite/default.nix
@@ -1,22 +1,42 @@
-{ stdenv, fetchurl, perl, cmake, vala, pkgconfig, gobjectIntrospection, glib, gtk3, gnome3, gettext }:
+{ stdenv, fetchFromGitHub, perl, cmake, ninja, vala, pkgconfig, gobjectIntrospection, glib, gtk3, gnome3, gettext }:
 
 stdenv.mkDerivation rec {
-  majorVersion = "0.4";
-  minorVersion = "1";
-  name = "granite-${majorVersion}.${minorVersion}";
-  src = fetchurl {
-    url = "https://launchpad.net/granite/${majorVersion}/${majorVersion}.${minorVersion}/+download/${name}.tar.xz";
-    sha256 = "177h5h1q4qd7g99mzbczvz78j8c9jf4f1gwdj9f6imbc7r913d4b";
+  name = "granite-${version}";
+  version = "0.5";
+
+  src = fetchFromGitHub {
+    owner = "elementary";
+    repo = "granite";
+    rev = version;
+    sha256 = "15l8z1jkqhvappnr8jww27lfy3dwqybgsxk5iccyvnvzpjdh2s0h";
   };
-  cmakeFlags = "-DINTROSPECTION_GIRDIR=share/gir-1.0/ -DINTROSPECTION_TYPELIBDIR=lib/girepository-1.0";
-  nativeBuildInputs = [ pkgconfig ];
-  buildInputs = [perl cmake vala gobjectIntrospection glib gtk3 gnome3.libgee gettext];
-  meta = {
+
+  cmakeFlags = [
+    "-DINTROSPECTION_GIRDIR=share/gir-1.0/"
+    "-DINTROSPECTION_TYPELIBDIR=lib/girepository-1.0"
+  ];
+
+  nativeBuildInputs = [
+    vala
+    pkgconfig
+    cmake
+    ninja
+    perl
+    gettext
+    gobjectIntrospection
+  ];
+  buildInputs = [
+    glib
+    gtk3
+    gnome3.libgee
+  ];
+
+  meta = with stdenv.lib; {
     description = "An extension to GTK+ used by elementary OS";
     longDescription = "An extension to GTK+ that provides several useful widgets and classes to ease application development. Designed for elementary OS.";
-    homepage = https://launchpad.net/granite;
-    license = stdenv.lib.licenses.lgpl3;
-    platforms = stdenv.lib.platforms.linux;
-    maintainers = [ stdenv.lib.maintainers.vozz ];
+    homepage = https://github.com/elementary/granite;
+    license = licenses.lgpl3;
+    platforms = platforms.linux;
+    maintainers = [ maintainers.vozz ];
   };
 }
diff --git a/pkgs/development/libraries/grpc/default.nix b/pkgs/development/libraries/grpc/default.nix
index 4e6fe783dc2c..f33e52867c56 100644
--- a/pkgs/development/libraries/grpc/default.nix
+++ b/pkgs/development/libraries/grpc/default.nix
@@ -1,19 +1,26 @@
 { stdenv, fetchurl, cmake, zlib, c-ares, pkgconfig, openssl, protobuf, gflags }:
 
-stdenv.mkDerivation rec
-  { name = "grpc-1.8.3";
-    src = fetchurl
-      { url = "https://github.com/grpc/grpc/archive/v1.8.3.tar.gz";
-        sha256 = "14ichjllvhkbv8sjh9j5njnagpqw2sl12n41ga90jnj7qvfwwjy1";
-      };
-    nativeBuildInputs = [ cmake pkgconfig ];
-    buildInputs = [ zlib c-ares c-ares.cmake-config openssl protobuf gflags ];
-    cmakeFlags =
-      [ "-DgRPC_ZLIB_PROVIDER=package"
-        "-DgRPC_CARES_PROVIDER=package"
-        "-DgRPC_SSL_PROVIDER=package"
-        "-DgRPC_PROTOBUF_PROVIDER=package"
-        "-DgRPC_GFLAGS_PROVIDER=package"
-      ];
-    enableParallelBuilds = true;
-  }
+stdenv.mkDerivation rec {
+  version = "1.9.1";
+  name = "grpc-${version}";
+  src = fetchurl {
+    url = "https://github.com/grpc/grpc/archive/v${version}.tar.gz";
+    sha256 = "0h2w0dckxydngva9kl7dpilif8k9zi2ajnlanscr7s5kkza3dhps";
+  };
+  nativeBuildInputs = [ cmake pkgconfig ];
+  buildInputs = [ zlib c-ares c-ares.cmake-config openssl protobuf gflags ];
+  cmakeFlags =
+    [ "-DgRPC_ZLIB_PROVIDER=package"
+      "-DgRPC_CARES_PROVIDER=package"
+      "-DgRPC_SSL_PROVIDER=package"
+      "-DgRPC_PROTOBUF_PROVIDER=package"
+      "-DgRPC_GFLAGS_PROVIDER=package"
+    ];
+  enableParallelBuilds = true;
+
+  meta = with stdenv.lib; {
+    description = "The C based gRPC (C++, Python, Ruby, Objective-C, PHP, C#)";
+    license = licenses.asl20;
+    homepage = https://grpc.io/;
+  };
+}
diff --git a/pkgs/development/libraries/hunspell/default.nix b/pkgs/development/libraries/hunspell/default.nix
index dfb45aa598d7..ecbfbb7da0b8 100644
--- a/pkgs/development/libraries/hunspell/default.nix
+++ b/pkgs/development/libraries/hunspell/default.nix
@@ -1,12 +1,12 @@
 { stdenv, fetchurl, ncurses, readline, autoreconfHook }:
 
 stdenv.mkDerivation rec {
-  version = "1.6.1";
+  version = "1.6.2";
   name = "hunspell-${version}";
 
   src = fetchurl {
     url = "https://github.com/hunspell/hunspell/archive/v${version}.tar.gz";
-    sha256 = "0j9c20sj7bgd6f77193g1ihy8w905byk2gdhdc0r9dsh7irr7x9h";
+    sha256 = "1i7lsv2cm0713ia3j5wjkcrhpfp3lqpjpwp4d3v18n7ycaqcxn9w";
   };
 
   outputs = [ "bin" "dev" "out" "man" ];
diff --git a/pkgs/development/libraries/hwloc/default.nix b/pkgs/development/libraries/hwloc/default.nix
index c0745cb9e687..ad39a4fde319 100644
--- a/pkgs/development/libraries/hwloc/default.nix
+++ b/pkgs/development/libraries/hwloc/default.nix
@@ -1,8 +1,9 @@
 { stdenv, fetchurl, pkgconfig, expat, ncurses, pciutils, numactl
-, cairo, libX11
-, x11Support ? (!stdenv.isCygwin)
+, x11Support ? false, libX11 ? null, cairo ? null
 }:
 
+assert x11Support -> libX11 != null && cairo != null;
+
 with stdenv.lib;
 
 stdenv.mkDerivation rec {
diff --git a/pkgs/development/libraries/icu/60.nix b/pkgs/development/libraries/icu/60.nix
new file mode 100644
index 000000000000..e56135b15c62
--- /dev/null
+++ b/pkgs/development/libraries/icu/60.nix
@@ -0,0 +1,4 @@
+import ./base.nix {
+  version = "60.2";
+  sha256 = "065l3n0q9wqaw8dz20x82srshhm6i987fr9ync5xf9mr6n7ylwzh";
+}
diff --git a/pkgs/development/libraries/icu/base.nix b/pkgs/development/libraries/icu/base.nix
index 6d9a9725cc2e..2c8392c8bac8 100644
--- a/pkgs/development/libraries/icu/base.nix
+++ b/pkgs/development/libraries/icu/base.nix
@@ -26,7 +26,7 @@ stdenv.mkDerivation {
   '';
 
   # https://sourceware.org/glibc/wiki/Release/2.26#Removal_of_.27xlocale.h.27
-  postPatch = if stdenv ? glibc
+  postPatch = if (stdenv.hostPlatform.libc == "glibc" || stdenv.hostPlatform.libc == "musl")
     then "substituteInPlace i18n/digitlst.cpp --replace '<xlocale.h>' '<locale.h>'"
     else null; # won't find locale_t on darwin
 
diff --git a/pkgs/development/libraries/isl/0.11.1.nix b/pkgs/development/libraries/isl/0.11.1.nix
index 63140dba37f7..e2d7d7ffd034 100644
--- a/pkgs/development/libraries/isl/0.11.1.nix
+++ b/pkgs/development/libraries/isl/0.11.1.nix
@@ -4,7 +4,7 @@ stdenv.mkDerivation rec {
   name = "isl-0.11.1"; # CLooG 0.16.3 fails to build with ISL 0.08.
 
   src = fetchurl {
-    url = "http://pkgs.fedoraproject.org/repo/pkgs/gcc/isl-0.11.1.tar.bz2/bce1586384d8635a76d2f017fb067cd2/isl-0.11.1.tar.bz2";
+    url = "http://src.fedoraproject.org/repo/pkgs/gcc/isl-0.11.1.tar.bz2/bce1586384d8635a76d2f017fb067cd2/isl-0.11.1.tar.bz2";
     sha256 = "13d9cqa5rzhbjq0xf0b2dyxag7pqa72xj9dhsa03m8ccr1a4npq9";
   };
 
diff --git a/pkgs/development/libraries/java/libmatthew-java/default.nix b/pkgs/development/libraries/java/libmatthew-java/default.nix
index df4a19efd2c4..3b28c3a2bd57 100644
--- a/pkgs/development/libraries/java/libmatthew-java/default.nix
+++ b/pkgs/development/libraries/java/libmatthew-java/default.nix
@@ -3,7 +3,7 @@
 stdenv.mkDerivation {
   name = "libmatthew-java-0.8";
   src = fetchurl {
-    url = http://pkgs.fedoraproject.org/repo/pkgs/libmatthew-java/libmatthew-java-0.8.tar.gz/8455b8751083ce25c99c2840609271f5/libmatthew-java-0.8.tar.gz;
+    url = http://src.fedoraproject.org/repo/pkgs/libmatthew-java/libmatthew-java-0.8.tar.gz/8455b8751083ce25c99c2840609271f5/libmatthew-java-0.8.tar.gz;
     sha256 = "1yldkhsdzm0a41a0i881bin2jklhp85y3ah245jd6fz3npcx7l85";
   };
   JAVA_HOME=jdk;
diff --git a/pkgs/development/libraries/json-c/0.11.nix b/pkgs/development/libraries/json-c/0.11.nix
index 029921ee08c0..8c4eab9ede6e 100644
--- a/pkgs/development/libraries/json-c/0.11.nix
+++ b/pkgs/development/libraries/json-c/0.11.nix
@@ -6,6 +6,9 @@ stdenv.mkDerivation rec {
     url    = "https://github.com/json-c/json-c/archive/json-c-0.11-20130402.tar.gz";
     sha256 = "1m8fy7lbahv1r7yqbhw4pl057sxmmgjihm1fsvc3h66710s2i24r";
   };
+
+  NIX_CFLAGS_COMPILE = [ "-Wno-error=implicit-fallthrough" ];
+
   meta = with stdenv.lib; {
     description = "A JSON implementation in C";
     homepage    = https://github.com/json-c/json-c/wiki;
diff --git a/pkgs/development/libraries/json-c/default.nix b/pkgs/development/libraries/json-c/default.nix
index b8c72d9669e0..7317efc53f86 100644
--- a/pkgs/development/libraries/json-c/default.nix
+++ b/pkgs/development/libraries/json-c/default.nix
@@ -11,6 +11,9 @@ stdenv.mkDerivation rec {
 
   nativeBuildInputs = [ autoreconfHook ]; # won't configure without it, no idea why
 
+  # probably OK after update: https://github.com/json-c/json-c/pull/365
+  NIX_CFLAGS_COMPILE = [ "-Wno-error=implicit-fallthrough" ];
+
   # compatibility hack (for mypaint at least)
   postInstall = ''
     ln -s json-c.pc "$dev/lib/pkgconfig/json.pc"
diff --git a/pkgs/development/libraries/kde-frameworks/fetch.sh b/pkgs/development/libraries/kde-frameworks/fetch.sh
index 119abbe9f530..d4901ba4233b 100644
--- a/pkgs/development/libraries/kde-frameworks/fetch.sh
+++ b/pkgs/development/libraries/kde-frameworks/fetch.sh
@@ -1 +1 @@
-WGET_ARGS=( https://download.kde.org/stable/frameworks/5.42/ -A '*.tar.xz' )
+WGET_ARGS=( https://download.kde.org/stable/frameworks/5.43/ -A '*.tar.xz' )
diff --git a/pkgs/development/libraries/kde-frameworks/kglobalaccel.nix b/pkgs/development/libraries/kde-frameworks/kglobalaccel.nix
index 05fde45f17d2..ae945ab73384 100644
--- a/pkgs/development/libraries/kde-frameworks/kglobalaccel.nix
+++ b/pkgs/development/libraries/kde-frameworks/kglobalaccel.nix
@@ -13,8 +13,4 @@ mkDerivation {
     qtx11extras
   ];
   propagatedBuildInputs = [ qtbase ];
-  postPatch = ''
-    sed -i src/runtime/org.kde.kglobalaccel.service.in \
-        -e "s|@CMAKE_INSTALL_PREFIX@|''${!outputBin}|"
-  '';
 }
diff --git a/pkgs/development/libraries/kde-frameworks/plasma-framework.nix b/pkgs/development/libraries/kde-frameworks/plasma-framework.nix
index a2a90e448d49..44005ec7d282 100644
--- a/pkgs/development/libraries/kde-frameworks/plasma-framework.nix
+++ b/pkgs/development/libraries/kde-frameworks/plasma-framework.nix
@@ -4,7 +4,7 @@
   kactivities, karchive, kconfig, kconfigwidgets, kcoreaddons, kdbusaddons,
   kdeclarative, kglobalaccel, kguiaddons, ki18n, kiconthemes, kio,
   knotifications, kpackage, kservice, kwayland, kwindowsystem, kxmlgui,
-  qtbase, qtdeclarative, qtscript, qtx11extras, kirigami2
+  qtbase, qtdeclarative, qtscript, qtx11extras, kirigami2, qtquickcontrols2
 }:
 
 mkDerivation {
@@ -15,6 +15,7 @@ mkDerivation {
     kactivities karchive kconfig kconfigwidgets kcoreaddons kdbusaddons
     kdeclarative kglobalaccel kguiaddons ki18n kiconthemes kio knotifications
     kwayland kwindowsystem kxmlgui qtdeclarative qtscript qtx11extras kirigami2
+    qtquickcontrols2
   ];
   propagatedBuildInputs = [ kpackage kservice qtbase ];
 }
diff --git a/pkgs/development/libraries/kde-frameworks/srcs.nix b/pkgs/development/libraries/kde-frameworks/srcs.nix
index f8d4bcf5c8f9..af01f6faef64 100644
--- a/pkgs/development/libraries/kde-frameworks/srcs.nix
+++ b/pkgs/development/libraries/kde-frameworks/srcs.nix
@@ -3,611 +3,627 @@
 
 {
   attica = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/attica-5.42.0.tar.xz";
-      sha256 = "0icjsk5sbri6nwybb2301wc6ysc1h4p35rxqp0adifyksq8akyxd";
-      name = "attica-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/attica-5.43.0.tar.xz";
+      sha256 = "1vvf5d0dnfm69gahrhndy9jqxk7hkh5vj6z9pyprpl3zp5z1ki1a";
+      name = "attica-5.43.0.tar.xz";
     };
   };
   baloo = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/baloo-5.42.0.tar.xz";
-      sha256 = "18yknkcls1ypsp8n5l254bhlffiq4as5w1wgcjzhnf49cacys8nl";
-      name = "baloo-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/baloo-5.43.0.tar.xz";
+      sha256 = "095z6w5qyq4z2hkdxq0vizfgv1v6g9w960wrh78b6bi1bf4ig2np";
+      name = "baloo-5.43.0.tar.xz";
     };
   };
   bluez-qt = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/bluez-qt-5.42.0.tar.xz";
-      sha256 = "0pbb0nn70hbsnp9q8jvqr3s85gh4bnnh1mp8xfkia2hp4c63ws9f";
-      name = "bluez-qt-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/bluez-qt-5.43.0.tar.xz";
+      sha256 = "04bsrp0biyn7b630hywk82rwn8kl8c2rwh8iwhjz35b51jjqm2b5";
+      name = "bluez-qt-5.43.0.tar.xz";
     };
   };
   breeze-icons = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/breeze-icons-5.42.0.tar.xz";
-      sha256 = "0mrj0b022yfy669qqby09k4ij6aqyky23gpnjcp85df9saq0x44r";
-      name = "breeze-icons-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/breeze-icons-5.43.0.tar.xz";
+      sha256 = "19yy6pcqjfbjxlkkf4g1hcgl3lv4m640sl26nblrydn9qyj5iniy";
+      name = "breeze-icons-5.43.0.tar.xz";
     };
   };
   extra-cmake-modules = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/extra-cmake-modules-5.42.0.tar.xz";
-      sha256 = "1ml6s3ssr5izm3vnzlg5gn2nkcbz5l5nmapvyr4ml7n0089b43a3";
-      name = "extra-cmake-modules-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/extra-cmake-modules-5.43.0.tar.xz";
+      sha256 = "1zgzjh5q1ppgfzj4mhprgd4848iwjnzqsnilb0dk5rgdrvfsamsp";
+      name = "extra-cmake-modules-5.43.0.tar.xz";
     };
   };
   frameworkintegration = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/frameworkintegration-5.42.0.tar.xz";
-      sha256 = "17fyny3c5chv7bipr19ayfjmd1amp2nms4ba5r7mwjp97xkphry7";
-      name = "frameworkintegration-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/frameworkintegration-5.43.0.tar.xz";
+      sha256 = "0qjpk4lslpxqj5aisczm5kl201g4z3grgjhx38r1ih4hyp805vw0";
+      name = "frameworkintegration-5.43.0.tar.xz";
     };
   };
   kactivities = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kactivities-5.42.0.tar.xz";
-      sha256 = "0z0ac426npq99s1b8yzrqkjjjc34nbxlpw8pw388yj7fa41hw21r";
-      name = "kactivities-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kactivities-5.43.0.tar.xz";
+      sha256 = "0rmmyjfgz8ybvdgpbqndsn0gxizxpmwhvglnnl8ia1s4sna6sjby";
+      name = "kactivities-5.43.0.tar.xz";
     };
   };
   kactivities-stats = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kactivities-stats-5.42.0.tar.xz";
-      sha256 = "0si70hayf4brr83jzdjdsfvp8nc1sb7vdk0q532liafhf8hw9mq8";
-      name = "kactivities-stats-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kactivities-stats-5.43.0.tar.xz";
+      sha256 = "1rrn1dxsiyvyf3pa5fyxa0sfbamv5c6g95s4f144xwrx2b130rh1";
+      name = "kactivities-stats-5.43.0.tar.xz";
     };
   };
   kapidox = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kapidox-5.42.0.tar.xz";
-      sha256 = "0izyd66p5403gl09l7irzy97mb9b14n4zyjrwap800zjlpwh41pz";
-      name = "kapidox-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kapidox-5.43.0.tar.xz";
+      sha256 = "0c358ply0qzg269vxyg6py6l8z5j8l4h6apqcynyql4dbbbm8941";
+      name = "kapidox-5.43.0.tar.xz";
     };
   };
   karchive = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/karchive-5.42.0.tar.xz";
-      sha256 = "1vq2ngdxmdl6hzjwdcrv66ban8v9s5jiqwy1mgdqv4ak14l31qbi";
-      name = "karchive-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/karchive-5.43.0.tar.xz";
+      sha256 = "1f3pqhpdgn00ni05iflyydkmsf3vd403ma5f42zj00kh30l9lqqf";
+      name = "karchive-5.43.0.tar.xz";
     };
   };
   kauth = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kauth-5.42.0.tar.xz";
-      sha256 = "04kqb2hhr9lkpkxiaqlnyk0kmk6p89z5fgp5i5g83hsi8maz7swi";
-      name = "kauth-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kauth-5.43.0.tar.xz";
+      sha256 = "05w8vx45mrf32kzcyjmay1k9dw3j8axbrrp6infg0hhfsgk04w1f";
+      name = "kauth-5.43.0.tar.xz";
     };
   };
   kbookmarks = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kbookmarks-5.42.0.tar.xz";
-      sha256 = "08q413mr5ib04gwnqznvm9vkkfmnh16rgf6rqdvclnci9w7ml5x2";
-      name = "kbookmarks-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kbookmarks-5.43.0.tar.xz";
+      sha256 = "0i7rfahn32m6xpbwra5m5nnpgq8l56jm0ijsq6f80cx8ww3nkcq5";
+      name = "kbookmarks-5.43.0.tar.xz";
     };
   };
   kcmutils = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kcmutils-5.42.0.tar.xz";
-      sha256 = "1q67b0m6w3xvm22kq8b0b0rib1jzf25gf6dz7h286987zfbbs5n7";
-      name = "kcmutils-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kcmutils-5.43.0.tar.xz";
+      sha256 = "1dshx859k64yp00s5xx7z6x0wlawxyq41rg795nqizhk2s76agr2";
+      name = "kcmutils-5.43.0.tar.xz";
     };
   };
   kcodecs = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kcodecs-5.42.0.tar.xz";
-      sha256 = "0b19z432r9dnyjknvwffhcmrg969yhydjvy4qrkrf22026f4smwc";
-      name = "kcodecs-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kcodecs-5.43.0.tar.xz";
+      sha256 = "0ncrzxvy2l324yvlzha9hkyp5qq75wfb9cbnxb5mygispxhrgh2v";
+      name = "kcodecs-5.43.0.tar.xz";
     };
   };
   kcompletion = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kcompletion-5.42.0.tar.xz";
-      sha256 = "0yqci2v0dk5v1mz4n3gca599a7mpihy563zc6sl8hsa30ld8li0f";
-      name = "kcompletion-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kcompletion-5.43.0.tar.xz";
+      sha256 = "065nzw26ps367lf3m1j6x95swk0f6grap71wjjv688gablcaz699";
+      name = "kcompletion-5.43.0.tar.xz";
     };
   };
   kconfig = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kconfig-5.42.0.tar.xz";
-      sha256 = "08gg0d20c09j7hyxm8ydpzk2yf30c87g9ag7a9nfykrmi6cqirdq";
-      name = "kconfig-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kconfig-5.43.0.tar.xz";
+      sha256 = "1na1b2dsajl9b9rn2990fd8cqqaj2iwddrxjacbf0ib5mray1sr2";
+      name = "kconfig-5.43.0.tar.xz";
     };
   };
   kconfigwidgets = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kconfigwidgets-5.42.0.tar.xz";
-      sha256 = "191zm24q2n001b65hcnfh2639k4iqhxwdmgdw29php3n2648xq4z";
-      name = "kconfigwidgets-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kconfigwidgets-5.43.0.tar.xz";
+      sha256 = "1qxv8m614y0j687gwcsqqkwcdwsbbwc7ivwx6l9djll4r7r1d43w";
+      name = "kconfigwidgets-5.43.0.tar.xz";
     };
   };
   kcoreaddons = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kcoreaddons-5.42.0.tar.xz";
-      sha256 = "17qv7r6z72mm9a0hyx5dgk90ikhhgm41bkvnq2hjal0py2lsnrs9";
-      name = "kcoreaddons-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kcoreaddons-5.43.0.tar.xz";
+      sha256 = "10pgja1v2x5q6jyajld3yq116g1m90djnbf6p35i6n9ng65h0zy6";
+      name = "kcoreaddons-5.43.0.tar.xz";
     };
   };
   kcrash = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kcrash-5.42.0.tar.xz";
-      sha256 = "049y0xdyw37y0qid3d3plj8szfys5gw98j7lhcakiini8mn5cins";
-      name = "kcrash-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kcrash-5.43.0.tar.xz";
+      sha256 = "1hvfhr3s0igc1n37w5fxx0jivsgvcdvpa5iywnkk4g1r1l6snx1b";
+      name = "kcrash-5.43.0.tar.xz";
     };
   };
   kdbusaddons = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kdbusaddons-5.42.0.tar.xz";
-      sha256 = "1613pc3r70jnzvpwm1xjdbdsmcpx28jwvcs2qq9swlywr5qr9hbd";
-      name = "kdbusaddons-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kdbusaddons-5.43.0.tar.xz";
+      sha256 = "1h4m6ra1cangvqyzmkxkh1fld4rlvxnzz8wny53drgbyrsq2xxv5";
+      name = "kdbusaddons-5.43.0.tar.xz";
     };
   };
   kdeclarative = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kdeclarative-5.42.0.tar.xz";
-      sha256 = "1w604jy6vg2247vggz0ivl7wy2h5iapkz2z86mah3aw99f7dqa22";
-      name = "kdeclarative-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kdeclarative-5.43.0.tar.xz";
+      sha256 = "0jbm2ih9hzpnfaqc867fvwr414q78f9jjk6yyf1cjgq8vx8rmjq1";
+      name = "kdeclarative-5.43.0.tar.xz";
     };
   };
   kded = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kded-5.42.0.tar.xz";
-      sha256 = "0w25dl4pnvby28gz0yvij32vi9n3p8si4nm4x45j7zsi2cb70j4l";
-      name = "kded-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kded-5.43.0.tar.xz";
+      sha256 = "1kfli2f4hxc9a0hk75kgln3x374y4av6hfajhncwyq37zd4wxq3r";
+      name = "kded-5.43.0.tar.xz";
     };
   };
   kdelibs4support = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/portingAids/kdelibs4support-5.42.0.tar.xz";
-      sha256 = "0aiig8akn6bdxrqdl96xjjy2pxw8hhfrsalbkkzyhh06j794snfb";
-      name = "kdelibs4support-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/portingAids/kdelibs4support-5.43.0.tar.xz";
+      sha256 = "1rwk436vpny3sq12bjqwapjicc3inyrq6dn34a6mr6gjcd5p2mch";
+      name = "kdelibs4support-5.43.0.tar.xz";
     };
   };
   kdesignerplugin = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kdesignerplugin-5.42.0.tar.xz";
-      sha256 = "004axa1fkj954d65x7l9z8dmw04209hb368rwa4gjzb8naf13ib6";
-      name = "kdesignerplugin-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kdesignerplugin-5.43.0.tar.xz";
+      sha256 = "0pk95vsgj67jw0qaalcrfvzkr9flxh6shkkmlaxclrz6yhnf9axz";
+      name = "kdesignerplugin-5.43.0.tar.xz";
     };
   };
   kdesu = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kdesu-5.42.0.tar.xz";
-      sha256 = "0402p1h7wifk6sppg7ca9w0zfjllbhc1j5gsxj7ypq55g94np7hx";
-      name = "kdesu-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kdesu-5.43.0.tar.xz";
+      sha256 = "1mll18ms5zk7i4lpkj6qdcxwaf0h52h9mi47y882hzqkvvbnk4d6";
+      name = "kdesu-5.43.0.tar.xz";
     };
   };
   kdewebkit = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kdewebkit-5.42.0.tar.xz";
-      sha256 = "1csd4p996im7ygxc5rfdkzgdpngjgzyqakj12rl9rnfbsd15i8kb";
-      name = "kdewebkit-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kdewebkit-5.43.0.tar.xz";
+      sha256 = "0yi7dv77flz7z1yjzlvrfvlybp7knz808hpfbr6hxgrp1gwi7h6b";
+      name = "kdewebkit-5.43.0.tar.xz";
     };
   };
   kdnssd = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kdnssd-5.42.0.tar.xz";
-      sha256 = "1k1rz62h3mafliik5n0k98dc56b5v2v6qyqj40696mcyc2d1yvll";
-      name = "kdnssd-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kdnssd-5.43.0.tar.xz";
+      sha256 = "0d58aaii1r2x3nmw9s2hnk178sr54yvrqi22ry3xm3v7yvx9jr3b";
+      name = "kdnssd-5.43.0.tar.xz";
     };
   };
   kdoctools = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kdoctools-5.42.0.tar.xz";
-      sha256 = "1bby3avdllch1mji0mxzcix8q5yir5a0i6wpjs5lwckv1glh6kmz";
-      name = "kdoctools-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kdoctools-5.43.0.tar.xz";
+      sha256 = "1llif166p17ffjwsgvb0n9lq8ip3if0hqma9zm9jpghm5j21q1jh";
+      name = "kdoctools-5.43.0.tar.xz";
     };
   };
   kemoticons = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kemoticons-5.42.0.tar.xz";
-      sha256 = "0f6an1bwxnga41a2b35b2pdcni4p0hh76k4jvanl3g046v07f2wr";
-      name = "kemoticons-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kemoticons-5.43.0.tar.xz";
+      sha256 = "161n9xg82gxvl4a4by328llxz0x4w643vcxi88414zg1bm1z1cfb";
+      name = "kemoticons-5.43.0.tar.xz";
     };
   };
   kfilemetadata = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kfilemetadata-5.42.0.tar.xz";
-      sha256 = "03wk38q3sq354ykz9dwbgykn73ldf94ryx6hxvpr66bq3a59jmwz";
-      name = "kfilemetadata-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kfilemetadata-5.43.0.tar.xz";
+      sha256 = "1lxbj8fnaf6sybxgyq6h1qnic65l0mdhhxlw1djd16c7ih7ghrnq";
+      name = "kfilemetadata-5.43.0.tar.xz";
     };
   };
   kglobalaccel = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kglobalaccel-5.42.0.tar.xz";
-      sha256 = "0nlza73i0qd79yhwhpnvgbh2xa9lvd1n2xg25p3bvfzwidcfdxg6";
-      name = "kglobalaccel-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kglobalaccel-5.43.0.tar.xz";
+      sha256 = "00ygkszkklaz7k4hkshcb5gfynha8rncwvj7z9jvhd9chmwkiffc";
+      name = "kglobalaccel-5.43.0.tar.xz";
     };
   };
   kguiaddons = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kguiaddons-5.42.0.tar.xz";
-      sha256 = "193i8b4f13dkgp88m3pk9wzi0dhx7qmsnmpizxia3457gg016wn7";
-      name = "kguiaddons-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kguiaddons-5.43.0.tar.xz";
+      sha256 = "0z6sf4pr4ykhlzdckyfap2f41y2chrl2kwlrb4djflfxf7q2xcqr";
+      name = "kguiaddons-5.43.0.tar.xz";
+    };
+  };
+  kholidays = {
+    version = "5.43.0";
+    src = fetchurl {
+      url = "${mirror}/stable/frameworks/5.43/kholidays-5.43.0.tar.xz";
+      sha256 = "0zkjh7y0gdwakil6dj0z8yi2zzczzvdfhmnsd54s5yn0fvv37xbk";
+      name = "kholidays-5.43.0.tar.xz";
     };
   };
   khtml = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/portingAids/khtml-5.42.0.tar.xz";
-      sha256 = "1bfslndxvad0zgzr22w2mz1xwavix9bh5qrrv8dpshlh043bwr3l";
-      name = "khtml-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/portingAids/khtml-5.43.0.tar.xz";
+      sha256 = "034aycdi7i6pvwkwz632nzk3vp8040hlvmzpp38nsy4idl4klh46";
+      name = "khtml-5.43.0.tar.xz";
     };
   };
   ki18n = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/ki18n-5.42.0.tar.xz";
-      sha256 = "1rpriflb2a48j94zxgh63l6rzq4nlnlkvy89ns1vkdw42bnqrjx9";
-      name = "ki18n-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/ki18n-5.43.0.tar.xz";
+      sha256 = "1zspxv6z4a3rarrn9n38g7rp0gc48bl4kih91m3r2nkap83jb04a";
+      name = "ki18n-5.43.0.tar.xz";
     };
   };
   kiconthemes = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kiconthemes-5.42.0.tar.xz";
-      sha256 = "1nbxxpf8bv835xl35b17rk8s3zs110bh31078kqqh7dhvwzlxic7";
-      name = "kiconthemes-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kiconthemes-5.43.0.tar.xz";
+      sha256 = "105c892d4np4lshmd5f5x74m1ib3fbmvwgjzf6j317mq261r3rsw";
+      name = "kiconthemes-5.43.0.tar.xz";
     };
   };
   kidletime = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kidletime-5.42.0.tar.xz";
-      sha256 = "019r41r28pcrcn1kwxsll53za705jkc9n23b6sr2lplgjk05bcxh";
-      name = "kidletime-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kidletime-5.43.0.tar.xz";
+      sha256 = "1jm2rdbzffnw0fv1pzfyz5lvzaa3x2pfp12zm9kl7skyj39z5vbj";
+      name = "kidletime-5.43.0.tar.xz";
     };
   };
   kimageformats = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kimageformats-5.42.0.tar.xz";
-      sha256 = "1k67yrmszx7azjzrg478rimbz991lghx4d6dmg22p6dknajd78a6";
-      name = "kimageformats-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kimageformats-5.43.0.tar.xz";
+      sha256 = "1bn4rx5xx68m101n3ba774pd8qddaw3bwf2bc7zp7gi6d8bprh9i";
+      name = "kimageformats-5.43.0.tar.xz";
     };
   };
   kinit = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kinit-5.42.0.tar.xz";
-      sha256 = "05vpac41pw1n8y58l2z08vyknzv950x8dxxw66dnymm2v31w07ia";
-      name = "kinit-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kinit-5.43.0.tar.xz";
+      sha256 = "1jrzr4kv84rvf214wszd2zdnvlx2qxvr1ah9f564h23vvdrg79gd";
+      name = "kinit-5.43.0.tar.xz";
     };
   };
   kio = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kio-5.42.0.tar.xz";
-      sha256 = "1526a89x11ank55dp3rfp7xd04w8x7prjg3y6i7n2q9nabwhw7gc";
-      name = "kio-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kio-5.43.0.tar.xz";
+      sha256 = "1mbjld1kh5hhslfm4rx9nddghkcgrxbw2pf39c7niq0r1llx5v76";
+      name = "kio-5.43.0.tar.xz";
     };
   };
   kirigami2 = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kirigami2-5.42.0.tar.xz";
-      sha256 = "11gqn7amp0r9bgh8ldgisfc2lrkzkn5mq2a1madf24nvjbkvqnqv";
-      name = "kirigami2-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kirigami2-5.43.0.tar.xz";
+      sha256 = "0vshabb1q5pjscw0g57l7lpaal69g1mdpf01w0yskmbiqnzzpjl0";
+      name = "kirigami2-5.43.0.tar.xz";
     };
   };
   kitemmodels = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kitemmodels-5.42.0.tar.xz";
-      sha256 = "0mcdzdqwmvf9pwirsrnjbhrgqphnfmanbl9zij4qsmin8n866mhc";
-      name = "kitemmodels-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kitemmodels-5.43.0.tar.xz";
+      sha256 = "1yw7h7g0knlljizsf9cir196v22cqhlaazmrbm6jqz198g47sqdd";
+      name = "kitemmodels-5.43.0.tar.xz";
     };
   };
   kitemviews = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kitemviews-5.42.0.tar.xz";
-      sha256 = "1j1q0b08f8mnfc3r2a7rplyb2nv9f0aq5a3fxskinvg70c6y248w";
-      name = "kitemviews-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kitemviews-5.43.0.tar.xz";
+      sha256 = "19w6xhhxr7w40baw6i6lfq0fd7bahxfzr7pj10mrwb5i6bcbsk1h";
+      name = "kitemviews-5.43.0.tar.xz";
     };
   };
   kjobwidgets = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kjobwidgets-5.42.0.tar.xz";
-      sha256 = "1m3csdl7wh18ywv5p0qpbjpixvflgjcq3yvk3vlvh0sxxlwcz8k4";
-      name = "kjobwidgets-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kjobwidgets-5.43.0.tar.xz";
+      sha256 = "1kri6z737abwsglh29bh4kckbf1ici8n162lcyvw8b3w91l4dyc6";
+      name = "kjobwidgets-5.43.0.tar.xz";
     };
   };
   kjs = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/portingAids/kjs-5.42.0.tar.xz";
-      sha256 = "1m26sb2qyrcgmpkw76k2yv5my2pkhld96vw6aaqm77q90faw734g";
-      name = "kjs-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/portingAids/kjs-5.43.0.tar.xz";
+      sha256 = "1jdqdy1kxarv6k31yd0k280jyfy7y3qwgd9c7is7aya1ns46nx59";
+      name = "kjs-5.43.0.tar.xz";
     };
   };
   kjsembed = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/portingAids/kjsembed-5.42.0.tar.xz";
-      sha256 = "10w4w4ncwr245bv1ii4sh154w91ghfz0l60k89j50lsydpcqcp3a";
-      name = "kjsembed-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/portingAids/kjsembed-5.43.0.tar.xz";
+      sha256 = "11hcwwhkrl7sns4s36nxnp550n9xvky1rkrissm0mqh76309g6hy";
+      name = "kjsembed-5.43.0.tar.xz";
     };
   };
   kmediaplayer = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/portingAids/kmediaplayer-5.42.0.tar.xz";
-      sha256 = "1k1pjc0cz36gs0pl2pxw8f9f82xkbqyy320nfyhan5waxbl1qd5n";
-      name = "kmediaplayer-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/portingAids/kmediaplayer-5.43.0.tar.xz";
+      sha256 = "1q1s5v3fqnmxx58ixgdhkhrgkrdxy8mq8hg4ll7l6038lgycfsxf";
+      name = "kmediaplayer-5.43.0.tar.xz";
     };
   };
   knewstuff = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/knewstuff-5.42.0.tar.xz";
-      sha256 = "0i2gmyp67xzf2m5wnv7v574q3gsp1yxfflv1jgl0wy57vchwn9g6";
-      name = "knewstuff-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/knewstuff-5.43.0.tar.xz";
+      sha256 = "1v3wzydi1jqb9an2bnxzfhwxhlb2lj8l735mdhym4859njj8x7w7";
+      name = "knewstuff-5.43.0.tar.xz";
     };
   };
   knotifications = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/knotifications-5.42.0.tar.xz";
-      sha256 = "0awmwypmd104vhaj2v9k83niflxj26d4mbl6mzfcj75lgka6kffc";
-      name = "knotifications-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/knotifications-5.43.0.tar.xz";
+      sha256 = "0kgn5h38z9xd5a210w989j3z0khs4l9ahf19lqfara1ziwl4gaiv";
+      name = "knotifications-5.43.0.tar.xz";
     };
   };
   knotifyconfig = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/knotifyconfig-5.42.0.tar.xz";
-      sha256 = "1h07bjj71611v6912m5ajli6qszh9w925zqbk3vih8rn6pd2s3mc";
-      name = "knotifyconfig-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/knotifyconfig-5.43.0.tar.xz";
+      sha256 = "0nrjxs263sp64h9pmrmr7fjkbpkalzr6crpyq0aqclciwfjpj326";
+      name = "knotifyconfig-5.43.0.tar.xz";
     };
   };
   kpackage = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kpackage-5.42.0.tar.xz";
-      sha256 = "10amhh07x8d0jkyylb19cyzjs71k8dq1y8isfahqzb2kd43vijqa";
-      name = "kpackage-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kpackage-5.43.0.tar.xz";
+      sha256 = "1nr7zkqp7zbvyrhc7iqznyqnfhmnqhhaqs30ig4gwsagq3x2a02b";
+      name = "kpackage-5.43.0.tar.xz";
     };
   };
   kparts = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kparts-5.42.0.tar.xz";
-      sha256 = "1mb5gp2ckmmrb4ym7cqvyl81wnp7cryk85gmizl7cnn69svlf40h";
-      name = "kparts-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kparts-5.43.0.tar.xz";
+      sha256 = "09i2ds6xgkbm9k9nd9yj1p3qw9xl3a25lh97ln9c39ccx32i32wd";
+      name = "kparts-5.43.0.tar.xz";
     };
   };
   kpeople = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kpeople-5.42.0.tar.xz";
-      sha256 = "050km3rpx58acx2341si46lxc2hywa59m8rwd849c2dnsxw3w1hm";
-      name = "kpeople-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kpeople-5.43.0.tar.xz";
+      sha256 = "0xi6sxprqvmjc30cw1rfpryahid9dswql6b1wrdv5wsmci8k4xmq";
+      name = "kpeople-5.43.0.tar.xz";
     };
   };
   kplotting = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kplotting-5.42.0.tar.xz";
-      sha256 = "109b9grshrwralyp8ilkbf1k0akaggygqh6wafqdf0ris0ps13l9";
-      name = "kplotting-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kplotting-5.43.0.tar.xz";
+      sha256 = "0d5mf5xaysw837ninvdx1hfra8qjaxd9lcm28fyjfm506iq8v09f";
+      name = "kplotting-5.43.0.tar.xz";
     };
   };
   kpty = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kpty-5.42.0.tar.xz";
-      sha256 = "07s16zxs03ixy7yxy9fda83yqhcgqzx42gnvwjwkyc8q05njmma6";
-      name = "kpty-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kpty-5.43.0.tar.xz";
+      sha256 = "09m02ramzk6jc9scnsvcm2sgnia2vmnnfgmjsddspc2kp1aj2km8";
+      name = "kpty-5.43.0.tar.xz";
     };
   };
   kross = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/portingAids/kross-5.42.0.tar.xz";
-      sha256 = "1aqqwby6jslimpvx42d4n6gjsjc8l82gmsq5ajpv9zkkk91dqfqi";
-      name = "kross-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/portingAids/kross-5.43.0.tar.xz";
+      sha256 = "05px64msss6as0pbrpl6l4y2n97kayphxqhwfilgsj9yjmyhm46h";
+      name = "kross-5.43.0.tar.xz";
     };
   };
   krunner = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/krunner-5.42.0.tar.xz";
-      sha256 = "0xh9kss67l09am1ilsr9zyx1yhlmaq3g9x60hw0sx7h7wrl6zsw6";
-      name = "krunner-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/krunner-5.43.0.tar.xz";
+      sha256 = "1wiaaz7wc2ls0gxyyws7cw6gmphkzayhdz1xxsyn4bzrc1h3z7dw";
+      name = "krunner-5.43.0.tar.xz";
     };
   };
   kservice = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kservice-5.42.0.tar.xz";
-      sha256 = "0z8zfpd00ndvkm1klp8l4mrcksshhyg280zgmg3gffz5rgh3gwri";
-      name = "kservice-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kservice-5.43.0.tar.xz";
+      sha256 = "1mdxd8kxawlhrsnd9lrx6cx9p8gvvsr9mx2d1s0bi90kapfqyqi3";
+      name = "kservice-5.43.0.tar.xz";
     };
   };
   ktexteditor = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/ktexteditor-5.42.0.tar.xz";
-      sha256 = "020y3j6vm15sfpiwainr3qsx9i93j15mrvq523wmbmdj1z36yrh2";
-      name = "ktexteditor-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/ktexteditor-5.43.0.tar.xz";
+      sha256 = "1rhw1y0js2vjjp7c9f539lvqvci4nrgdicaypw3p5ndg8vsw2xag";
+      name = "ktexteditor-5.43.0.tar.xz";
     };
   };
   ktextwidgets = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/ktextwidgets-5.42.0.tar.xz";
-      sha256 = "088azbv95ycwxmxxw4l63i2l14fmn8l473pb4djh2mvz1ypfqayk";
-      name = "ktextwidgets-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/ktextwidgets-5.43.0.tar.xz";
+      sha256 = "0h5bxf1a9mik2p2xhnm7nnr0r54s6zf4cby4qd8nlwl292dyf8gy";
+      name = "ktextwidgets-5.43.0.tar.xz";
     };
   };
   kunitconversion = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kunitconversion-5.42.0.tar.xz";
-      sha256 = "0219pna4l3vvhyf5acsc87n48jzdnws6kwyhaiy3hy1pzrilv32l";
-      name = "kunitconversion-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kunitconversion-5.43.0.tar.xz";
+      sha256 = "14syfc9vybmaais740xmb79g7ffpyanwkb2blar88zm810dpshqd";
+      name = "kunitconversion-5.43.0.tar.xz";
     };
   };
   kwallet = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kwallet-5.42.0.tar.xz";
-      sha256 = "1kv3v7593srfn0wd7qp4rhvb30rxp7d2qmlwi0n4nc9s6v59pabn";
-      name = "kwallet-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kwallet-5.43.0.tar.xz";
+      sha256 = "01mxl06nbpgkp6dva1kvqcbhjahgjqkbql6rhwgdyhb4asabnsmj";
+      name = "kwallet-5.43.0.tar.xz";
     };
   };
   kwayland = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kwayland-5.42.0.tar.xz";
-      sha256 = "0wr6ygppahxsx3dh71h2wmybv7z7iyqdv7wn80cxb0mp4zpyinh7";
-      name = "kwayland-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kwayland-5.43.0.tar.xz";
+      sha256 = "0glp9bnv53jjycwni0ywd7apr0jps3j0hpzs14y2v9bp4mwjgaji";
+      name = "kwayland-5.43.0.tar.xz";
     };
   };
   kwidgetsaddons = {
-    version = "5.42.1";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kwidgetsaddons-5.42.1.tar.xz";
-      sha256 = "0h0vfrfl5zi01fpvmd825kazzlyawz3i66qrfkymdrnvqmfzcmlg";
-      name = "kwidgetsaddons-5.42.1.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kwidgetsaddons-5.43.0.tar.xz";
+      sha256 = "15x7k953jj6vqmb2bbw4wad2n10akkg4i5n0gmkj4fsaiag359sr";
+      name = "kwidgetsaddons-5.43.0.tar.xz";
     };
   };
   kwindowsystem = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kwindowsystem-5.42.0.tar.xz";
-      sha256 = "15k6x0f93qxka3mz7qfzak2ibdd88q77pz6akil8s3g41zsg2dqv";
-      name = "kwindowsystem-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kwindowsystem-5.43.0.tar.xz";
+      sha256 = "0zcrls3m9np2a9r5n7fry03ll6vrj36abjh2sajm531z657xmxjd";
+      name = "kwindowsystem-5.43.0.tar.xz";
     };
   };
   kxmlgui = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kxmlgui-5.42.0.tar.xz";
-      sha256 = "0kfxjx8wrhkys5bydnv84nqxc2jqvv92zb2l6zpi0km5ggmia5y0";
-      name = "kxmlgui-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kxmlgui-5.43.0.tar.xz";
+      sha256 = "1jncpyfvanyl02zx8zi2mmwbx86yaq9k7k40vh716dswbh2idzd3";
+      name = "kxmlgui-5.43.0.tar.xz";
     };
   };
   kxmlrpcclient = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/kxmlrpcclient-5.42.0.tar.xz";
-      sha256 = "0ciip27ilsfk9s3gslpbi06v8i6ipdbmcig2jf43z3amsxpq0ncn";
-      name = "kxmlrpcclient-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/kxmlrpcclient-5.43.0.tar.xz";
+      sha256 = "0c99wq7kqaqvafppcai47q8w9n21ncfmrc562cvhyqnx9qr9n5vn";
+      name = "kxmlrpcclient-5.43.0.tar.xz";
     };
   };
   modemmanager-qt = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/modemmanager-qt-5.42.0.tar.xz";
-      sha256 = "0q6qzn60z55h0gyc9xwdfaq45mjpk3zrr6d4qqjjfkqsr3866sfx";
-      name = "modemmanager-qt-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/modemmanager-qt-5.43.0.tar.xz";
+      sha256 = "16h8af046jlhn31dg1y3ajpniidkijf0wy0qa7z6bpqw01vj4l6w";
+      name = "modemmanager-qt-5.43.0.tar.xz";
     };
   };
   networkmanager-qt = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/networkmanager-qt-5.42.0.tar.xz";
-      sha256 = "03hhvx8d52mfgbhd4gn0vhsk9k1fv1pvq24ixxdgs2mw44v884xq";
-      name = "networkmanager-qt-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/networkmanager-qt-5.43.0.tar.xz";
+      sha256 = "0pkm02bg201xcxyn2cbw1w3gag9ig4g5yz4wbd2db6qzvficmfqc";
+      name = "networkmanager-qt-5.43.0.tar.xz";
     };
   };
   oxygen-icons5 = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/oxygen-icons5-5.42.0.tar.xz";
-      sha256 = "0pnav9h0xmvbaamzpcyznjjv25slz8maszshx7sj7h07b5a23x46";
-      name = "oxygen-icons5-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/oxygen-icons5-5.43.0.tar.xz";
+      sha256 = "13c80jnc6h2z9bbwwzq1b8jsn80n4bs0zzr2xsbzsfbl5sw0hwpc";
+      name = "oxygen-icons5-5.43.0.tar.xz";
     };
   };
   plasma-framework = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/plasma-framework-5.42.0.tar.xz";
-      sha256 = "079c8h0lmbkfr3srj5m8a40b50kyrxbgmy1n66329l8js9xrvaah";
-      name = "plasma-framework-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/plasma-framework-5.43.0.tar.xz";
+      sha256 = "1v7far0jz0b0rvx4jzqsq2pp1diny5c2qz67jyxnqlfgsba8y466";
+      name = "plasma-framework-5.43.0.tar.xz";
     };
   };
   prison = {
-    version = "5.42.0";
+    version = "5.43.0";
+    src = fetchurl {
+      url = "${mirror}/stable/frameworks/5.43/prison-5.43.0.tar.xz";
+      sha256 = "018kj3xgl5wr3nhrasxmwvk6fh63fdwlz78z1rzyd78jx95wpaqc";
+      name = "prison-5.43.0.tar.xz";
+    };
+  };
+  purpose = {
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/prison-5.42.0.tar.xz";
-      sha256 = "0bhg2fjdwsv7mk16jh1nc3miwggz1dl9l99l2f20xvi75hn7rryg";
-      name = "prison-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/purpose-5.43.0.tar.xz";
+      sha256 = "1vk796f3w2arqaql16yy012211vxgz6awa8kg0p1zrxbid43x757";
+      name = "purpose-5.43.0.tar.xz";
     };
   };
   qqc2-desktop-style = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/qqc2-desktop-style-5.42.0.tar.xz";
-      sha256 = "1arlfhcshfs11pgf87jzjgln1p711zlx0v0q014740mbzb9g5wnk";
-      name = "qqc2-desktop-style-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/qqc2-desktop-style-5.43.0.tar.xz";
+      sha256 = "0q6v1si1c8dlvq5f303dd4n1qqrn9kw0r51dl37px6rvy2n16d0w";
+      name = "qqc2-desktop-style-5.43.0.tar.xz";
     };
   };
   solid = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/solid-5.42.0.tar.xz";
-      sha256 = "10lr8paaq6vaiqn833kzcdc3kkyv8j9fdchy7h8pvi9ajjjwq0lq";
-      name = "solid-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/solid-5.43.0.tar.xz";
+      sha256 = "0q62z23dml6rndgmkg6r09gsi0in8c4gbgv66dw47v02spsnp7v9";
+      name = "solid-5.43.0.tar.xz";
     };
   };
   sonnet = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/sonnet-5.42.0.tar.xz";
-      sha256 = "1r3amddmy0nm8klw0jzvb8bl1l9hkrx50d8j0zq2lbjy36h3yliw";
-      name = "sonnet-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/sonnet-5.43.0.tar.xz";
+      sha256 = "0i5vxaw124093fi7fi8gjyi08xgxpkpb68lrpsxqdikadvx6nwaa";
+      name = "sonnet-5.43.0.tar.xz";
     };
   };
   syntax-highlighting = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/syntax-highlighting-5.42.0.tar.xz";
-      sha256 = "1iwiym50859jki4x41rfdmbd14jiq5lr2hdg46pjkyw17njdjd60";
-      name = "syntax-highlighting-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/syntax-highlighting-5.43.0.tar.xz";
+      sha256 = "0a1xrpk3wavcq6d3cld33l05g5xlhz635vwcc6i1092gsgdns7k1";
+      name = "syntax-highlighting-5.43.0.tar.xz";
     };
   };
   threadweaver = {
-    version = "5.42.0";
+    version = "5.43.0";
     src = fetchurl {
-      url = "${mirror}/stable/frameworks/5.42/threadweaver-5.42.0.tar.xz";
-      sha256 = "1isqlpnfxzxyz7mdm7yfrafgnx09mcndicdgdw3mi4r4misbrrbn";
-      name = "threadweaver-5.42.0.tar.xz";
+      url = "${mirror}/stable/frameworks/5.43/threadweaver-5.43.0.tar.xz";
+      sha256 = "0mmnf6lirvqwlrijpn5vqd8l9pk74dpsbr81y6kyfmx31mj36jjx";
+      name = "threadweaver-5.43.0.tar.xz";
     };
   };
 }
diff --git a/pkgs/development/libraries/kyotocabinet/default.nix b/pkgs/development/libraries/kyotocabinet/default.nix
index 57eaf74d2908..935f52eeb71c 100644
--- a/pkgs/development/libraries/kyotocabinet/default.nix
+++ b/pkgs/development/libraries/kyotocabinet/default.nix
@@ -26,7 +26,7 @@ stdenv.mkDerivation rec {
 
   patches = [(fetchurl {
     name = "gcc6.patch";
-    url = "http://pkgs.fedoraproject.org/rpms/kyotocabinet/raw/master/f/kyotocabinet-1.2.76-gcc6.patch";
+    url = "http://src.fedoraproject.org/rpms/kyotocabinet/raw/master/f/kyotocabinet-1.2.76-gcc6.patch";
     sha256 = "1h5k38mkiq7lz8nd2gbn7yvimcz49g3z7phn1cr560bzjih8rz23";
   })];
 
diff --git a/pkgs/development/libraries/libassuan/default.nix b/pkgs/development/libraries/libassuan/default.nix
index 94369449ff3d..827d3de79ea8 100644
--- a/pkgs/development/libraries/libassuan/default.nix
+++ b/pkgs/development/libraries/libassuan/default.nix
@@ -1,4 +1,4 @@
-{ fetchurl, stdenv, pth, libgpgerror }:
+{ fetchurl, stdenv, gettext, pth, libgpgerror }:
 
 stdenv.mkDerivation rec {
   name = "libassuan-2.5.1";
@@ -11,7 +11,8 @@ stdenv.mkDerivation rec {
   outputs = [ "out" "dev" "info" ];
   outputBin = "dev"; # libassuan-config
 
-  buildInputs = [ libgpgerror pth ];
+  buildInputs = [ libgpgerror pth ]
+    ++ stdenv.lib.optional stdenv.isDarwin gettext;
 
   doCheck = true;
 
@@ -20,18 +21,16 @@ stdenv.mkDerivation rec {
     sed -i 's,#include <gpg-error.h>,#include "${libgpgerror.dev}/include/gpg-error.h",g' $dev/include/assuan.h
   '';
 
-  meta = {
+  meta = with stdenv.lib; {
     description = "IPC library used by GnuPG and related software";
-
     longDescription = ''
       Libassuan is a small library implementing the so-called Assuan
       protocol.  This protocol is used for IPC between most newer
       GnuPG components.  Both, server and client side functions are
       provided.
     '';
-
     homepage = http://gnupg.org;
-    license = stdenv.lib.licenses.lgpl2Plus;
-    platforms = stdenv.lib.platforms.all;
+    license = licenses.lgpl2Plus;
+    platforms = platforms.all;
   };
 }
diff --git a/pkgs/development/libraries/libatomic_ops/default.nix b/pkgs/development/libraries/libatomic_ops/default.nix
index 3aae754be405..714e9361440c 100644
--- a/pkgs/development/libraries/libatomic_ops/default.nix
+++ b/pkgs/development/libraries/libatomic_ops/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, autoconf, automake, libtool }:
+{ stdenv, fetchurl, autoconf, automake, libtool, hostPlatform }:
 
 stdenv.mkDerivation rec {
   name = "libatomic_ops-${version}";
@@ -12,6 +12,9 @@ stdenv.mkDerivation rec {
     sha256 ="1rif2hjscq5mh639nsnjhb90c01gnmy1sbmj6x6hsn1xmpnj95r1";
   };
 
+  # https://github.com/ivmai/libatomic_ops/pull/32
+  patches = if hostPlatform.isRiscV then [ ./riscv.patch ] else null;
+
   nativeBuildInputs = stdenv.lib.optionals stdenv.isCygwin [ autoconf automake libtool ];
 
   preConfigure = stdenv.lib.optionalString stdenv.isCygwin ''
diff --git a/pkgs/development/libraries/libatomic_ops/riscv.patch b/pkgs/development/libraries/libatomic_ops/riscv.patch
new file mode 100644
index 000000000000..27f2408c34c6
--- /dev/null
+++ b/pkgs/development/libraries/libatomic_ops/riscv.patch
@@ -0,0 +1,40 @@
+diff -Naur libatomic_ops-7.6.2-orig/src/atomic_ops/sysdeps/gcc/riscv.h libatomic_ops-7.6.2/src/atomic_ops/sysdeps/gcc/riscv.h
+--- libatomic_ops-7.6.2-orig/src/atomic_ops/sysdeps/gcc/riscv.h	1969-12-31 19:00:00.000000000 -0500
++++ libatomic_ops-7.6.2/src/atomic_ops/sysdeps/gcc/riscv.h	2018-02-18 00:48:53.581721375 -0500
+@@ -0,0 +1 @@
++#include "generic.h"
+diff -Naur libatomic_ops-7.6.2-orig/src/atomic_ops.h libatomic_ops-7.6.2/src/atomic_ops.h
+--- libatomic_ops-7.6.2-orig/src/atomic_ops.h	2017-12-24 03:31:12.000000000 -0500
++++ libatomic_ops-7.6.2/src/atomic_ops.h	2018-02-18 00:48:53.580721359 -0500
+@@ -352,6 +352,9 @@
+ # if defined(__tile__)
+ #   include "atomic_ops/sysdeps/gcc/tile.h"
+ # endif
++# if defined(__riscv)
++#   include "atomic_ops/sysdeps/gcc/riscv.h"
++# endif
+ #endif /* __GNUC__ && !AO_USE_PTHREAD_DEFS */
+ 
+ #if (defined(__IBMC__) || defined(__IBMCPP__)) && !defined(__GNUC__) \
+diff -Naur libatomic_ops-7.6.2-orig/src/Makefile.am libatomic_ops-7.6.2/src/Makefile.am
+--- libatomic_ops-7.6.2-orig/src/Makefile.am	2017-12-24 03:31:12.000000000 -0500
++++ libatomic_ops-7.6.2/src/Makefile.am	2018-02-18 00:48:53.579721342 -0500
+@@ -92,6 +92,7 @@
+           atomic_ops/sysdeps/gcc/mips.h \
+           atomic_ops/sysdeps/gcc/nios2.h \
+           atomic_ops/sysdeps/gcc/powerpc.h \
++          atomic_ops/sysdeps/gcc/riscv.h \
+           atomic_ops/sysdeps/gcc/s390.h \
+           atomic_ops/sysdeps/gcc/sh.h \
+           atomic_ops/sysdeps/gcc/sparc.h \
+diff -Naur libatomic_ops-7.6.2-orig/src/Makefile.in libatomic_ops-7.6.2/src/Makefile.in
+--- libatomic_ops-7.6.2-orig/src/Makefile.in	2017-12-24 03:32:23.000000000 -0500
++++ libatomic_ops-7.6.2/src/Makefile.in	2018-02-18 00:49:14.005062121 -0500
+@@ -446,6 +446,7 @@
+           atomic_ops/sysdeps/gcc/mips.h \
+           atomic_ops/sysdeps/gcc/nios2.h \
+           atomic_ops/sysdeps/gcc/powerpc.h \
++          atomic_ops/sysdeps/gcc/riscv.h \
+           atomic_ops/sysdeps/gcc/s390.h \
+           atomic_ops/sysdeps/gcc/sh.h \
+           atomic_ops/sysdeps/gcc/sparc.h \
diff --git a/pkgs/development/libraries/libav/default.nix b/pkgs/development/libraries/libav/default.nix
index 6a80a856df3c..a069894f6c8c 100644
--- a/pkgs/development/libraries/libav/default.nix
+++ b/pkgs/development/libraries/libav/default.nix
@@ -28,9 +28,9 @@ let inherit (stdenv.lib) optional optionals hasPrefix; in
 let
   result = {
     # e.g. https://libav.org/releases/libav-11.11.tar.xz.sha1
-    libav_0_8 = libavFun "0.8.20" "0c7a2417c3a01eb74072691bb93ce802ae1be08f";
-    libav_11  = libavFun "11.11"  "d7444fa4f135bdd7347cc962ab4b5228796b0f23";
-    libav_12  = libavFun "12.2"   "3784b15f88076ca0ab8fb6b0377e975b83a5c9f5";
+    libav_0_8 = libavFun "0.8.21" "d858f65128dad0bac1a8c3a51e5cbb27a7c79b3f";
+    libav_11  = libavFun "11.12"  "61d5dcab5fde349834af193a572b12a5fd6a4d42";
+    libav_12  = libavFun "12.3"   "386c18c8b857f23dfcf456ce40370716130211d9";
   };
 
   libavFun = version : sha1 : stdenv.mkDerivation rec {
@@ -125,7 +125,6 @@ let
       license = with licenses; if enableUnfree then unfree #ToDo: redistributable or not?
         else if enableGPL then gpl2Plus else lgpl21Plus;
       platforms = with platforms; linux ++ darwin;
-      maintainers = [ maintainers.vcunat ];
     };
   }; # libavFun
 
diff --git a/pkgs/development/libraries/libbfd/default.nix b/pkgs/development/libraries/libbfd/default.nix
index 5bcf243155b0..018239a3e778 100644
--- a/pkgs/development/libraries/libbfd/default.nix
+++ b/pkgs/development/libraries/libbfd/default.nix
@@ -1,5 +1,5 @@
 { stdenv
-, fetchurl, autoreconfHook264, bison, binutils-raw
+, fetchurl, fetchpatch, gnu-config, autoreconfHook264, bison, binutils-raw
 , libiberty, zlib
 }:
 
@@ -11,6 +11,10 @@ stdenv.mkDerivation rec {
 
   patches = binutils-raw.bintools.patches ++ [
     ../../tools/misc/binutils/build-components-separately.patch
+    (fetchpatch {
+      url = "https://raw.githubusercontent.com/mxe/mxe/e1d4c144ee1994f70f86cf7fd8168fe69bd629c6/src/bfd-1-disable-subdir-doc.patch";
+      sha256 = "0pzb3i74d1r7lhjan376h59a7kirw15j7swwm8pz3zy9lkdqkj6q";
+    })
   ];
 
   # We just want to build libbfd
@@ -18,6 +22,14 @@ stdenv.mkDerivation rec {
     cd bfd
   '';
 
+  postAutoreconf = ''
+    echo "Updating config.guess and config.sub from ${gnu-config}"
+    cp -f ${gnu-config}/config.{guess,sub} ../
+  '';
+
+  # We update these ourselves
+  dontUpdateAutotoolsGnuConfigScripts = true;
+
   nativeBuildInputs = [ autoreconfHook264 bison ];
   buildInputs = [ libiberty zlib ];
 
diff --git a/pkgs/development/libraries/libbsd/darwin.patch b/pkgs/development/libraries/libbsd/darwin.patch
index a9ac414e93df..4bddec6b0ffd 100644
--- a/pkgs/development/libraries/libbsd/darwin.patch
+++ b/pkgs/development/libraries/libbsd/darwin.patch
@@ -1,5 +1,5 @@
 diff --git a/configure.ac b/configure.ac
-index c909878..60c540e 100644
+index 88ccd91..0857782 100644
 --- a/configure.ac
 +++ b/configure.ac
 @@ -59,7 +59,7 @@ AS_CASE([$host_os],
@@ -31,7 +31,7 @@ index c909878..60c540e 100644
 +		os_is_macosx=false
 +		nonLinuxOS=false
 +		;;
-+esac
++esac		
 +AM_CONDITIONAL([IS_DARWIN], [test x$os_is_macosx = xtrue])
 +AM_COND_IF([IS_DARWIN],
 +	[AC_DEFINE([IS_DARWIN], [1], [Get HostOS Type is Darwin])])
@@ -58,7 +58,7 @@ index 45b3b15..d0d4043 100644
  #include <sys/types.h>
  #include <stdint.h>
 diff --git a/include/bsd/stdio.h b/include/bsd/stdio.h
-index 4b69983..8e2ac75 100644
+index 4b69983..c75151b 100644
 --- a/include/bsd/stdio.h
 +++ b/include/bsd/stdio.h
 @@ -48,12 +48,16 @@
@@ -69,37 +69,60 @@ index 4b69983..8e2ac75 100644
  /* XXX: The function requires cooperation from the system libc to store the
   * line buffer in the FILE struct itself. */
  char *fgetln(FILE *fp, size_t *lenp)
- 	LIBBSD_DEPRECATED("This functions cannot be safely ported, "
- 	                  "use getline(3) instead, as it is supported "
- 	                  "by GNU and POSIX.1-2008.");
+-	LIBBSD_DEPRECATED("This functions cannot be safely ported, "
+-	                  "use getline(3) instead, as it is supported "
+-	                  "by GNU and POSIX.1-2008.");
++	__attribute__((deprecated("This functions cannot be safely ported, "
++	                          "use getline(3) instead, as it is supported "
++	                          "by GNU and POSIX.1-2008.")));
 +#else
 +char *fgetln(FILE *fp, size_t *lenp);
 +#endif
  
  /*
   * Note: We diverge from the FreeBSD, OpenBSD and DragonFlyBSD declarations,
+diff --git a/include/bsd/stdlib.h b/include/bsd/stdlib.h
+index ebc9638..6cd7943 100644
+--- a/include/bsd/stdlib.h
++++ b/include/bsd/stdlib.h
+@@ -67,9 +67,11 @@ int sradixsort(const unsigned char **base, int nmemb,
+                const unsigned char *table, unsigned endbyte);
+ 
+ void *reallocf(void *ptr, size_t size);
+-#if defined(_GNU_SOURCE) && defined(__GLIBC__) && !__GLIBC_PREREQ(2, 26)
++#if defined(_GNU_SOURCE) && defined(__GLIBC__) && defined(__GLIBC_PREREQ)
++#if !__GLIBC_PREREQ(2, 26)
+ void *reallocarray(void *ptr, size_t nmemb, size_t size);
+ #endif
++#endif
+ 
+ long long strtonum(const char *nptr, long long minval, long long maxval,
+                    const char **errstr);
 diff --git a/include/bsd/string.h b/include/bsd/string.h
-index ee2f953..a3ab077 100644
+index 6798bf6..6baaa14 100644
 --- a/include/bsd/string.h
 +++ b/include/bsd/string.h
-@@ -37,11 +37,14 @@
+@@ -37,6 +37,12 @@
  #include <sys/types.h>
  
  __BEGIN_DECLS
--size_t strlcpy(char *dst, const char *src, size_t siz);
--size_t strlcat(char *dst, const char *src, size_t siz);
- char *strnstr(const char *str, const char *find, size_t str_len);
 +#if defined(darwin) || defined(__APPLE__) || defined(MACOSX)
 +size_t bsd_strlcpy(char *dst, const char *src, size_t siz);
 +size_t bsd_strlcat(char *dst, const char *src, size_t siz);
++char *bsd_strnstr(const char *str, const char *find, size_t str_len);
 +void bsd_strmode(mode_t mode, char *str);
 +#else
- void strmode(mode_t mode, char *str);
--
-+#endif
+ size_t strlcpy(char *dst, const char *src, size_t siz);
+ size_t strlcat(char *dst, const char *src, size_t siz);
+ char *strnstr(const char *str, const char *find, size_t str_len);
+@@ -45,6 +51,7 @@ void strmode(mode_t mode, char *str);
+ #if defined(_GNU_SOURCE) && defined(__GLIBC__) && !__GLIBC_PREREQ(2, 25)
  void explicit_bzero(void *buf, size_t len);
+ #endif
++#endif
  __END_DECLS
  
+ #endif
 diff --git a/src/Makefile.am b/src/Makefile.am
 index ad83dbf..0f2a7ee 100644
 --- a/src/Makefile.am
@@ -519,18 +542,17 @@ index 462535a..e7eb46f 100644
 +}
  #endif
 diff --git a/src/funopen.c b/src/funopen.c
-index 1e05c7e..ed8ce85 100644
+index 1e05c7e..75e61ea 100644
 --- a/src/funopen.c
 +++ b/src/funopen.c
-@@ -137,7 +137,7 @@ funopen(const void *cookie,
- 
- 	return fopencookie(cookiewrap, mode, funcswrap);
- }
--#elif defined(__MUSL__)
-+#elif defined(__MUSL__) || defined(darwin) || defined(__APPLE__) || defined(MACOSX)
- /*
-  * This is unimplementable on musl based systems, and upstream has stated
+@@ -143,6 +143,7 @@ funopen(const void *cookie,
   * they will not add the needed support to implement it. Just ignore this
+  * interface there, as it has never been provided anyway.
+  */
++#elif defined(darwin) || defined(__APPLE__) || defined(MACOSX)
+ #else
+ #error "Function funopen() needs to be ported or disabled."
+ #endif
 diff --git a/src/getentropy.c b/src/getentropy.c
 index 3f11a1e..8a23a07 100644
 --- a/src/getentropy.c
@@ -563,13 +585,15 @@ index 4f368a1..ab22fc1 100644
  #define SHA512_DIGEST_LENGTH		64
  
 diff --git a/src/hash/sha512c.c b/src/hash/sha512c.c
-index b3c8d5e..4fade0f 100644
+index b3c8d5e..f69013d 100644
 --- a/src/hash/sha512c.c
 +++ b/src/hash/sha512c.c
-@@ -25,7 +25,11 @@
+@@ -25,7 +25,13 @@
   */
  
  #include <sys/cdefs.h>
++__FBSDID("$FreeBSD$");
++
 +#if defined(darwin) || defined(__APPLE__) || defined(MACOSX)
 +#include <machine/endian.h>
 +#else
@@ -579,24 +603,25 @@ index b3c8d5e..4fade0f 100644
  
  #include <string.h>
 diff --git a/src/nlist.c b/src/nlist.c
-index 0932f59..a3ba2be 100644
+index 0932f59..598a329 100644
 --- a/src/nlist.c
 +++ b/src/nlist.c
-@@ -27,6 +27,8 @@
+@@ -27,6 +27,10 @@
   * SUCH DAMAGE.
   */
  
 +#if !defined(darwin) && !defined(__APPLE__) && !defined(MACOSX)
-+
++#if defined(LIBC_SCCS) && !defined(lint)
++static char sccsid[] = "@(#)nlist.c	8.1 (Berkeley) 6/4/93";
++#endif /* LIBC_SCCS and not lint */
  #include <sys/cdefs.h>
  
  #include <sys/param.h>
-@@ -265,3 +267,5 @@ nlist(const char *name, struct nlist *list)
+@@ -265,3 +269,4 @@ nlist(const char *name, struct nlist *list)
  	(void)close(fd);
  	return (n);
  }
-+
-+#endif
++#endif /* _NLIST_DO_ELF */
 diff --git a/src/setproctitle.c b/src/setproctitle.c
 index 038ac7d..d0ef01b 100644
 --- a/src/setproctitle.c
diff --git a/pkgs/development/libraries/libclc/default.nix b/pkgs/development/libraries/libclc/default.nix
index c5ba65e7b6d7..a83a3c672c0f 100644
--- a/pkgs/development/libraries/libclc/default.nix
+++ b/pkgs/development/libraries/libclc/default.nix
@@ -1,16 +1,22 @@
-{ stdenv, fetchFromGitHub, python2, llvm_4, clang }:
+{ stdenv, fetchFromGitHub, python, llvmPackages }:
+
+let
+  llvm = llvmPackages.llvm;
+  clang = llvmPackages.clang;
+in
 
 stdenv.mkDerivation {
-  name = "libclc-2017-02-25";
+  name = "libclc-2017-11-29";
 
   src = fetchFromGitHub {
     owner = "llvm-mirror";
     repo = "libclc";
-    rev = "17648cd846390e294feafef21c32c7106eac1e24";
-    sha256 = "1c20jyh3sdwd9r37zs4vvppmsx8vhf2xbx0cxsrc27bhx5245p0s";
+    rev = "d6384415ab854c68777dd77451aa2bc0d959da99";
+    sha256 = "10fqrlnqlknh58x7pfsbg9r07fblfg2mgq2m4fr1jbb836ncn3wh";
   };
 
-  buildInputs = [ python2 llvm_4 clang ];
+  nativeBuildInputs = [ python ];
+  buildInputs = [ llvm clang ];
 
   postPatch = ''
     sed -i 's,llvm_clang =.*,llvm_clang = "${clang}/bin/clang",' configure.py
@@ -18,7 +24,7 @@ stdenv.mkDerivation {
   '';
 
   configurePhase = ''
-    ${python2.interpreter} ./configure.py --prefix=$out
+    ${python.interpreter} ./configure.py --prefix=$out
   '';
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/libraries/libdaemon/default.nix b/pkgs/development/libraries/libdaemon/default.nix
index af832a70a73b..59e576fd3923 100644
--- a/pkgs/development/libraries/libdaemon/default.nix
+++ b/pkgs/development/libraries/libdaemon/default.nix
@@ -1,6 +1,6 @@
 {stdenv, fetchurl}:
 
-stdenv.mkDerivation rec {
+stdenv.mkDerivation (rec {
   name = "libdaemon-0.14";
 
   src = fetchurl {
@@ -24,4 +24,8 @@ stdenv.mkDerivation rec {
     platforms = stdenv.lib.platforms.unix;
     maintainers = [ ];
   };
-}
+} // stdenv.lib.optionalAttrs stdenv.hostPlatform.isMusl {
+  # This patch should be applied unconditionally, but doing so will cause mass rebuild.
+  patches = ./fix-includes.patch;
+})
+
diff --git a/pkgs/development/libraries/libdaemon/fix-includes.patch b/pkgs/development/libraries/libdaemon/fix-includes.patch
new file mode 100644
index 000000000000..51c5133afede
--- /dev/null
+++ b/pkgs/development/libraries/libdaemon/fix-includes.patch
@@ -0,0 +1,13 @@
+--- libdaemon-0.14.orig/examples/testd.c
++++ libdaemon-0.14/examples/testd.c
+@@ -21,9 +21,9 @@
+ #include <signal.h>
+ #include <errno.h>
+ #include <string.h>
++#include <unistd.h>
+ #include <sys/types.h>
+ #include <sys/time.h>
+-#include <sys/unistd.h>
+ #include <sys/select.h>
+ 
+ #include <libdaemon/dfork.h>
diff --git a/pkgs/development/libraries/libexecinfo/default.nix b/pkgs/development/libraries/libexecinfo/default.nix
new file mode 100644
index 000000000000..a61d51aa6b72
--- /dev/null
+++ b/pkgs/development/libraries/libexecinfo/default.nix
@@ -0,0 +1,46 @@
+{ stdenv, fetchurl, fetchpatch }:
+
+stdenv.mkDerivation rec {
+  name = "libexecinfo-${version}";
+  version = "1.1";
+
+  src = fetchurl {
+    url = "http://distcache.freebsd.org/local-distfiles/itetcu/${name}.tar.bz2";
+    sha256 = "07wvlpc1jk1sj4k5w53ml6wagh0zm9kv2l1jngv8xb7xww9ik8n9";
+  };
+
+  patches = [
+    (fetchpatch {
+      name = "10-execinfo.patch";
+      url = https://git.alpinelinux.org/cgit/aports/plain/main/libexecinfo/10-execinfo.patch?id=730cdcef6901750f4029d4c3b8639ce02ee3ead1;
+      sha256 = "0lnphrad4vspyljnvmm62dyxj98vgp3wabj4w3vfzfph7j8piw7g";
+    })
+    (fetchpatch {
+      name = "20-define-gnu-source.patch";
+      url = https://git.alpinelinux.org/cgit/aports/plain/main/libexecinfo/20-define-gnu-source.patch?id=730cdcef6901750f4029d4c3b8639ce02ee3ead1;
+      sha256 = "1mp8mc639b0h2s69m5z6s2h3q3n1zl298j9j0plzj7f979j76302";
+    })
+    (fetchpatch {
+      name = "30-linux-makefile.patch";
+      url = https://git.alpinelinux.org/cgit/aports/plain/main/libexecinfo/30-linux-makefile.patch?id=730cdcef6901750f4029d4c3b8639ce02ee3ead1;
+      sha256 = "1jwjz22z5cjy5h2bfghn62yl9ar8jiqhdvbwrcfavv17ihbhwcaf";
+    })
+  ];
+
+  makeFlags = [ "CC:=$(CC)" "AR:=$(AR)" ];
+
+  patchFlags = "-p0";
+
+  installPhase = ''
+    install -Dm644 execinfo.h stacktraverse.h -t $out/include
+    install -Dm755 libexecinfo.{a,so.1} -t $out/lib
+    ln -s $out/lib/libexecinfo.so{.1,}
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Quick-n-dirty BSD licensed clone of the GNU libc backtrace facility";
+    license = licenses.bsd2;
+    homepage = https://www.freshports.org/devel/libexecinfo;
+    maintainers = with maintainers; [ dtzWill ];
+  };
+}
diff --git a/pkgs/development/libraries/libffi/default.nix b/pkgs/development/libraries/libffi/default.nix
index e48db6c9928b..1339be451c29 100644
--- a/pkgs/development/libraries/libffi/default.nix
+++ b/pkgs/development/libraries/libffi/default.nix
@@ -1,4 +1,4 @@
-{ fetchurl, stdenv, dejagnu, doCheck ? false
+{ stdenv, fetchurl, fetchpatch,  dejagnu, doCheck ? false
 , buildPlatform, hostPlatform
 }:
 
@@ -10,11 +10,28 @@ stdenv.mkDerivation rec {
     sha256 = "0dya49bnhianl0r65m65xndz6ls2jn1xngyn72gd28ls3n7bnvnh";
   };
 
-  patches = stdenv.lib.optional stdenv.isCygwin ./3.2.1-cygwin.patch ++
-    stdenv.lib.optional stdenv.isAarch64 (fetchurl {
+  patches = stdenv.lib.optional stdenv.isCygwin ./3.2.1-cygwin.patch
+    ++ stdenv.lib.optional stdenv.isAarch64 (fetchpatch {
       url = https://src.fedoraproject.org/rpms/libffi/raw/ccffc1700abfadb0969495a6e51b964117fc03f6/f/libffi-aarch64-rhbz1174037.patch;
       sha256 = "1vpirrgny43hp0885rswgv3xski8hg7791vskpbg3wdjdpb20wbc";
-    });
+    })
+    ++ stdenv.lib.optional hostPlatform.isMusl (fetchpatch {
+      name = "gnu-linux-define.patch";
+      url = "https://git.alpinelinux.org/cgit/aports/plain/main/libffi/gnu-linux-define.patch?id=bb024fd8ec6f27a76d88396c9f7c5c4b5800d580";
+      sha256 = "11pvy3xkhyvnjfyy293v51f1xjy3x0azrahv1nw9y9mw8bifa2j2";
+    })
+    ++ stdenv.lib.optionals stdenv.isMips [
+      (fetchpatch {
+        name = "0001-mips-Use-compiler-internal-define-for-linux.patch";
+        url = "http://cgit.openembedded.org/openembedded-core/plain/meta/recipes-support/libffi/libffi/0001-mips-Use-compiler-internal-define-for-linux.patch?id=318e33a708378652edcf61ce7d9d7f3a07743000";
+        sha256 = "1gc53lw90p6hc0cmhj3csrwincfz7va5ss995ksw5gm0yrr9mrvb";
+      })
+      (fetchpatch {
+        name = "0001-mips-fix-MIPS-softfloat-build-issue.patch";
+        url = "http://cgit.openembedded.org/openembedded-core/plain/meta/recipes-support/libffi/libffi/0001-mips-fix-MIPS-softfloat-build-issue.patch?id=318e33a708378652edcf61ce7d9d7f3a07743000";
+        sha256 = "0l8xgdciqalg4z9rcwyk87h8fdxpfv4hfqxwsy2agpnpszl5jjdq";
+      })
+    ];
 
   outputs = [ "out" "dev" "man" "info" ];
 
diff --git a/pkgs/development/libraries/libgcrypt/default.nix b/pkgs/development/libraries/libgcrypt/default.nix
index 397000fc7d24..45564d64861d 100644
--- a/pkgs/development/libraries/libgcrypt/default.nix
+++ b/pkgs/development/libraries/libgcrypt/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, libgpgerror, enableCapabilities ? false, libcap }:
+{ stdenv, fetchurl, gettext, libgpgerror, enableCapabilities ? false, libcap }:
 
 assert enableCapabilities -> stdenv.isLinux;
 
@@ -20,6 +20,7 @@ stdenv.mkDerivation rec {
   hardeningDisable = stdenv.lib.optional stdenv.cc.isClang "fortify";
 
   buildInputs = [ libgpgerror ]
+    ++ stdenv.lib.optional stdenv.isDarwin gettext
     ++ stdenv.lib.optional enableCapabilities libcap;
 
   # Make sure libraries are correct for .pc and .la files
diff --git a/pkgs/development/libraries/libgpg-error/default.nix b/pkgs/development/libraries/libgpg-error/default.nix
index 9faf7a404585..e6cb62330c4e 100644
--- a/pkgs/development/libraries/libgpg-error/default.nix
+++ b/pkgs/development/libraries/libgpg-error/default.nix
@@ -9,7 +9,11 @@ stdenv.mkDerivation rec {
     sha256 = "1li95ni122fzinzlmxbln63nmgij63irxfvi52ws4zfbzv3am4sg";
   };
 
-  postPatch = "sed '/BUILD_TIMESTAMP=/s/=.*/=1970-01-01T00:01+0000/' -i ./configure";
+  postPatch = ''
+    sed '/BUILD_TIMESTAMP=/s/=.*/=1970-01-01T00:01+0000/' -i ./configure
+  '' + stdenv.lib.optionalString stdenv.hostPlatform.isMusl ''
+    ln -s lock-obj-pub.x86_64-pc-linux-musl.h src/syscfg/lock-obj-pub.linux-musl.h
+  '';
 
   outputs = [ "out" "dev" "info" ];
   outputBin = "dev"; # deps want just the lib, most likely
diff --git a/pkgs/development/libraries/libiconv/default.nix b/pkgs/development/libraries/libiconv/default.nix
index 899465124100..21abf7f8c079 100644
--- a/pkgs/development/libraries/libiconv/default.nix
+++ b/pkgs/development/libraries/libiconv/default.nix
@@ -2,7 +2,7 @@
 , buildPlatform, hostPlatform
 }:
 
-assert !stdenv.isLinux || hostPlatform != buildPlatform; # TODO: improve on cross
+# assert !stdenv.isLinux || hostPlatform != buildPlatform; # TODO: improve on cross
 
 stdenv.mkDerivation rec {
   name = "libiconv-${version}";
diff --git a/pkgs/development/libraries/libidn/default.nix b/pkgs/development/libraries/libidn/default.nix
index df92693de5a6..54d669f1913b 100644
--- a/pkgs/development/libraries/libidn/default.nix
+++ b/pkgs/development/libraries/libidn/default.nix
@@ -10,7 +10,8 @@ stdenv.mkDerivation rec {
 
   outputs = [ "bin" "dev" "out" "info" "devdoc" ];
 
-  doCheck = (stdenv.buildPlatform == stdenv.hostPlatform) && !stdenv.isDarwin;
+  # broken with gcc-7
+  #doCheck = !stdenv.isDarwin && !stdenv.hostPlatform.isMusl;
 
   hardeningDisable = [ "format" ];
 
diff --git a/pkgs/development/libraries/libksba/default.nix b/pkgs/development/libraries/libksba/default.nix
index 8bff5a21cd09..3f7a4bed9cc9 100644
--- a/pkgs/development/libraries/libksba/default.nix
+++ b/pkgs/development/libraries/libksba/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, libgpgerror }:
+{ stdenv, fetchurl, gettext, libgpgerror }:
 
 stdenv.mkDerivation rec {
   name = "libksba-1.3.5";
@@ -10,6 +10,7 @@ stdenv.mkDerivation rec {
 
   outputs = [ "out" "dev" "info" ];
 
+  buildInputs = stdenv.lib.optional stdenv.isDarwin gettext;
   propagatedBuildInputs = [ libgpgerror ];
 
   postInstall = ''
diff --git a/pkgs/development/libraries/libmemcached/default.nix b/pkgs/development/libraries/libmemcached/default.nix
index 086ba8f32d21..15e642832df6 100644
--- a/pkgs/development/libraries/libmemcached/default.nix
+++ b/pkgs/development/libraries/libmemcached/default.nix
@@ -17,11 +17,14 @@ stdenv.mkDerivation rec {
     ++ stdenv.lib.optional stdenv.isDarwin (fetchpatch {
       url = "https://raw.githubusercontent.com/Homebrew/homebrew/bfd4a0a4626b61c2511fdf573bcbbc6bbe86340e/Library/Formula/libmemcached.rb";
       sha256 = "1gjf3vd7hiyzxjvlg2zfc3y2j0lyr6nhbws4xb5dmin3csyp8qb8";
-    });
+    })
+    ++ stdenv.lib.optional stdenv.hostPlatform.isMusl ./musl-fixes.patch;
 
   buildInputs = [ libevent ];
   propagatedBuildInputs = [ cyrus_sasl ];
 
+  NIX_CFLAGS_COMPILE = [ "-fpermissive"/*gcc7*/ ];
+
   meta = with stdenv.lib; {
     homepage = http://libmemcached.org;
     description = "Open source C/C++ client library and tools for the memcached server";
diff --git a/pkgs/development/libraries/libmemcached/musl-fixes.patch b/pkgs/development/libraries/libmemcached/musl-fixes.patch
new file mode 100644
index 000000000000..eb2a6bc980eb
--- /dev/null
+++ b/pkgs/development/libraries/libmemcached/musl-fixes.patch
@@ -0,0 +1,58 @@
+diff --git a/libhashkit/fnv_64.cc b/libhashkit/fnv_64.cc
+index 68e4dd0..64656b7 100644
+--- a/libhashkit/fnv_64.cc
++++ b/libhashkit/fnv_64.cc
+@@ -37,8 +37,9 @@
+ 
+ 
+ #include <libhashkit/common.h>
++#include <limits.h>
+ 
+-#if __WORDSIZE == 64 && defined(HAVE_FNV64_HASH)
++#if (LONG_BITS == 64) && defined(HAVE_FNV64_HASH)
+ 
+ /* FNV hash'es lifted from Dustin Sallings work */
+ static uint64_t FNV_64_INIT= 0xcbf29ce484222325;
+diff --git a/libhashkit/has.cc b/libhashkit/has.cc
+index 843e32e..4153e5e 100644
+--- a/libhashkit/has.cc
++++ b/libhashkit/has.cc
+@@ -37,6 +37,7 @@
+ 
+ 
+ #include <libhashkit/common.h>
++#include <limits.h>
+ 
+ bool libhashkit_has_algorithm(const hashkit_hash_algorithm_t algo)
+ {
+@@ -44,7 +45,7 @@ bool libhashkit_has_algorithm(const hashkit_hash_algorithm_t algo)
+   {
+   case HASHKIT_HASH_FNV1_64:
+   case HASHKIT_HASH_FNV1A_64:
+-#if __WORDSIZE == 64 && defined(HAVE_FNV64_HASH)
++#if (LONG_BITS == 64) && defined(HAVE_FNV64_HASH)
+     return true;
+ #else
+     return false;
+diff --git a/libtest/cmdline.cc b/libtest/cmdline.cc
+index 29a22de..161c646 100644
+--- a/libtest/cmdline.cc
++++ b/libtest/cmdline.cc
+@@ -61,7 +61,7 @@ using namespace libtest;
+ #include <algorithm>
+ #include <stdexcept>
+ 
+-#ifndef __USE_GNU
++#ifndef _GNU_SOURCE
+ static char **environ= NULL;
+ #endif
+ 
+@@ -201,7 +201,7 @@ Application::error_t Application::run(const char *args[])
+ 
+   fatal_assert(posix_spawnattr_setsigmask(&spawnattr, &mask) == 0);
+ 
+-#if defined(POSIX_SPAWN_USEVFORK) || defined(__linux__)
++#if defined(POSIX_SPAWN_USEVFORK) || defined(__GLIBC__)
+   // Use USEVFORK on linux
+   flags |= POSIX_SPAWN_USEVFORK;
+ #endif
diff --git a/pkgs/development/libraries/libmpc/default.nix b/pkgs/development/libraries/libmpc/default.nix
index 97366d24c36e..106f6fe6c37c 100644
--- a/pkgs/development/libraries/libmpc/default.nix
+++ b/pkgs/development/libraries/libmpc/default.nix
@@ -1,23 +1,20 @@
 { stdenv, fetchurl
 , gmp, mpfr
-, buildPlatform, hostPlatform
 }:
 
 let
-  version = "1.0.3";
+  version = "1.1.0";
 in
 stdenv.mkDerivation rec {
   name = "libmpc-${version}"; # to avoid clash with the MPD client
 
   src = fetchurl {
-    url = "https://ftp.gnu.org/gnu/mpc/mpc-${version}.tar.gz";
-    sha256 = "1hzci2zrrd7v3g1jk35qindq05hbl0bhjcyyisq9z209xb3fqzb1";
+    url = "mirror://gnu/mpc/mpc-${version}.tar.gz";
+    sha256 = "0biwnhjm3rx3hc0rfpvyniky4lpzsvdcwhmcn7f0h4iw2hwcb1b9";
   };
 
   buildInputs = [ gmp mpfr ];
 
-  CFLAGS = "-I${gmp.dev}/include";
-
   doCheck = true; # not cross;
 
   meta = {
diff --git a/pkgs/development/libraries/libmwaw/default.nix b/pkgs/development/libraries/libmwaw/default.nix
index e1ac659683c9..35137a09cd9c 100644
--- a/pkgs/development/libraries/libmwaw/default.nix
+++ b/pkgs/development/libraries/libmwaw/default.nix
@@ -3,11 +3,11 @@ let
   s = # Generated upstream information
   rec {
     baseName="libmwaw";
-    version="0.3.10";
+    version="0.3.13";
     name="${baseName}-${version}";
-    hash="087j6kx03ggvqwpl944nnf75qkvi9bag8b0z59phg66gbz0s0imj";
-    url="https://netcologne.dl.sourceforge.net/project/libmwaw/libmwaw/libmwaw-0.3.10/libmwaw-0.3.10.tar.xz";
-    sha256="087j6kx03ggvqwpl944nnf75qkvi9bag8b0z59phg66gbz0s0imj";
+    hash="1sjs3nc39im232h5bf81w3il8ivd7w2bc2qssxf7k74g8hlcfmfv";
+    url="mirror://sourceforge/libmwaw/libmwaw/libmwaw-0.3.13/libmwaw-0.3.13.tar.xz";
+    sha256="1sjs3nc39im232h5bf81w3il8ivd7w2bc2qssxf7k74g8hlcfmfv";
   };
 
   nativeBuildInputs = [ pkgconfig ];
diff --git a/pkgs/development/libraries/libnet/default.nix b/pkgs/development/libraries/libnet/default.nix
index a93c16d784de..f642ad5ccfab 100644
--- a/pkgs/development/libraries/libnet/default.nix
+++ b/pkgs/development/libraries/libnet/default.nix
@@ -9,6 +9,8 @@ stdenv.mkDerivation rec {
     sha256 = "0qsapqa7dzq9f6lb19kzilif0pj82b64fjv5bq086hflb9w81hvj";
   };
 
+  patches = [ ./fix-includes.patch ];
+
   meta = with stdenv.lib; {
     homepage = https://github.com/sam-github/libnet;
     description = "Portable framework for low-level network packet construction";
diff --git a/pkgs/development/libraries/libnet/fix-includes.patch b/pkgs/development/libraries/libnet/fix-includes.patch
new file mode 100644
index 000000000000..5eb86bc37b79
--- /dev/null
+++ b/pkgs/development/libraries/libnet/fix-includes.patch
@@ -0,0 +1,29 @@
+--- libnet-1.1.6.orig/src/libnet_link_linux.c
++++ libnet-1.1.6/src/libnet_link_linux.c
+@@ -30,26 +30,15 @@
+ #include <sys/time.h>
+ 
+ #include <net/if.h>
+-#if (__GLIBC__)
+ #include <netinet/if_ether.h>
+ #include <net/if_arp.h>
+-#else
+-#include <linux/if_arp.h>
+-#include <linux/if_ether.h>
+-#endif
+ 
+ #if (HAVE_PACKET_SOCKET)
+ #ifndef SOL_PACKET
+ #define SOL_PACKET 263
+ #endif  /* SOL_PACKET */
+-#if __GLIBC__ >= 2 && __GLIBC_MINOR >= 1
+ #include <netpacket/packet.h>
+ #include <net/ethernet.h>     /* the L2 protocols */
+-#else
+-#include <asm/types.h>
+-#include <linux/if_packet.h>
+-#include <linux/if_ether.h>   /* The L2 protocols */
+-#endif
+ #endif  /* HAVE_PACKET_SOCKET */
+ 
+ #include "../include/libnet.h"
diff --git a/pkgs/development/libraries/libnfnetlink/Use-stdlib-uint-instead-of-u_int.patch b/pkgs/development/libraries/libnfnetlink/Use-stdlib-uint-instead-of-u_int.patch
new file mode 100644
index 000000000000..074bef42b97a
--- /dev/null
+++ b/pkgs/development/libraries/libnfnetlink/Use-stdlib-uint-instead-of-u_int.patch
@@ -0,0 +1,499 @@
+From patchwork Fri Apr  3 22:04:46 2015
+Content-Type: text/plain; charset="utf-8"
+MIME-Version: 1.0
+Content-Transfer-Encoding: 7bit
+Subject: Use stdlib uint* instead of u_int*
+From: Nathan McSween <nwmcsween@gmail.com>
+X-Patchwork-Id: 458131
+X-Patchwork-Delegate: pablo@netfilter.org
+Message-Id: <1428098686-17843-1-git-send-email-nwmcsween@gmail.com>
+To: netfilter-devel@vger.kernel.org
+Cc: Nathan McSween <nwmcsween@gmail.com>
+Date: Fri,  3 Apr 2015 22:04:46 +0000
+
+Signed-off-by: Nathan McSween <nwmcsween@gmail.com>
+---
+ include/libnfnetlink/libnfnetlink.h           | 25 +++++-----
+ include/libnfnetlink/linux_nfnetlink.h        | 11 +++--
+ include/libnfnetlink/linux_nfnetlink_compat.h |  6 ++-
+ src/iftable.c                                 |  9 ++--
+ src/iftable.h                                 |  6 ++-
+ src/libnfnetlink.c                            | 71 ++++++++++++++-------------
+ src/rtnl.c                                    |  5 +-
+ src/rtnl.h                                    |  3 +-
+ 8 files changed, 73 insertions(+), 63 deletions(-)
+
+diff --git a/include/libnfnetlink/libnfnetlink.h b/include/libnfnetlink/libnfnetlink.h
+index 1d8c49d..cd0be3d 100644
+--- a/include/libnfnetlink/libnfnetlink.h
++++ b/include/libnfnetlink/libnfnetlink.h
+@@ -15,6 +15,7 @@
+ #define aligned_u64 unsigned long long __attribute__((aligned(8)))
+ #endif
+ 
++#include <stdint.h>
+ #include <sys/socket.h>	/* for sa_family_t */
+ #include <linux/netlink.h>
+ #include <libnfnetlink/linux_nfnetlink.h>
+@@ -55,7 +56,7 @@ struct nfnlhdr {
+ struct nfnl_callback {
+ 	int (*call)(struct nlmsghdr *nlh, struct nfattr *nfa[], void *data);
+ 	void *data;
+-	u_int16_t attr_count;
++	uint16_t attr_count;
+ };
+ 
+ struct nfnl_handle;
+@@ -69,7 +70,7 @@ extern struct nfnl_handle *nfnl_open(void);
+ extern int nfnl_close(struct nfnl_handle *);
+ 
+ extern struct nfnl_subsys_handle *nfnl_subsys_open(struct nfnl_handle *, 
+-						   u_int8_t, u_int8_t, 
++						   uint8_t, uint8_t,
+ 						   unsigned int);
+ extern void nfnl_subsys_close(struct nfnl_subsys_handle *);
+ 
+@@ -88,8 +89,8 @@ extern int nfnl_sendiov(const struct nfnl_handle *nfnlh,
+ 			const struct iovec *iov, unsigned int num,
+ 			unsigned int flags);
+ extern void nfnl_fill_hdr(struct nfnl_subsys_handle *, struct nlmsghdr *,
+-			  unsigned int, u_int8_t, u_int16_t, u_int16_t,
+-			  u_int16_t);
++			  unsigned int, uint8_t, uint16_t, uint16_t,
++			  uint16_t);
+ extern __attribute__((deprecated)) int
+ nfnl_talk(struct nfnl_handle *, struct nlmsghdr *, pid_t,
+           unsigned, struct nlmsghdr *,
+@@ -103,8 +104,8 @@ nfnl_listen(struct nfnl_handle *,
+ /* receiving */
+ extern ssize_t nfnl_recv(const struct nfnl_handle *h, unsigned char *buf, size_t len);
+ extern int nfnl_callback_register(struct nfnl_subsys_handle *,
+-				  u_int8_t type, struct nfnl_callback *cb);
+-extern int nfnl_callback_unregister(struct nfnl_subsys_handle *, u_int8_t type);
++				  uint8_t type, struct nfnl_callback *cb);
++extern int nfnl_callback_unregister(struct nfnl_subsys_handle *, uint8_t type);
+ extern int nfnl_handle_packet(struct nfnl_handle *, char *buf, int len);
+ 
+ /* parsing */
+@@ -180,12 +181,12 @@ extern int nfnl_query(struct nfnl_handle *h, struct nlmsghdr *nlh);
+ 
+ /* nfnl attribute handling functions */
+ extern int nfnl_addattr_l(struct nlmsghdr *, int, int, const void *, int);
+-extern int nfnl_addattr8(struct nlmsghdr *, int, int, u_int8_t);
+-extern int nfnl_addattr16(struct nlmsghdr *, int, int, u_int16_t);
+-extern int nfnl_addattr32(struct nlmsghdr *, int, int, u_int32_t);
++extern int nfnl_addattr8(struct nlmsghdr *, int, int, uint8_t);
++extern int nfnl_addattr16(struct nlmsghdr *, int, int, uint16_t);
++extern int nfnl_addattr32(struct nlmsghdr *, int, int, uint32_t);
+ extern int nfnl_nfa_addattr_l(struct nfattr *, int, int, const void *, int);
+-extern int nfnl_nfa_addattr16(struct nfattr *, int, int, u_int16_t);
+-extern int nfnl_nfa_addattr32(struct nfattr *, int, int, u_int32_t);
++extern int nfnl_nfa_addattr16(struct nfattr *, int, int, uint16_t);
++extern int nfnl_nfa_addattr32(struct nfattr *, int, int, uint32_t);
+ extern int nfnl_parse_attr(struct nfattr **, int, struct nfattr *, int);
+ #define nfnl_parse_nested(tb, max, nfa) \
+ 	nfnl_parse_attr((tb), (max), NFA_DATA((nfa)), NFA_PAYLOAD((nfa)))
+@@ -197,7 +198,7 @@ extern int nfnl_parse_attr(struct nfattr **, int, struct nfattr *, int);
+ ({	(tail)->nfa_len = (void *) NLMSG_TAIL(nlh) - (void *) tail; })
+ 
+ extern void nfnl_build_nfa_iovec(struct iovec *iov, struct nfattr *nfa, 
+-				 u_int16_t type, u_int32_t len,
++				 uint16_t type, uint32_t len,
+ 				 unsigned char *val);
+ extern unsigned int nfnl_rcvbufsiz(const struct nfnl_handle *h, 
+ 				   unsigned int size);
+diff --git a/include/libnfnetlink/linux_nfnetlink.h b/include/libnfnetlink/linux_nfnetlink.h
+index 76a8550..7b843c6 100644
+--- a/include/libnfnetlink/linux_nfnetlink.h
++++ b/include/libnfnetlink/linux_nfnetlink.h
+@@ -1,5 +1,6 @@
+ #ifndef _NFNETLINK_H
+ #define _NFNETLINK_H
++#include <stdint.h>
+ #include <linux/types.h>
+ #include <libnfnetlink/linux_nfnetlink_compat.h>
+ 
+@@ -25,9 +26,9 @@ enum nfnetlink_groups {
+ /* General form of address family dependent message.
+  */
+ struct nfgenmsg {
+-	u_int8_t  nfgen_family;		/* AF_xxx */
+-	u_int8_t  version;		/* nfnetlink version */
+-	u_int16_t    res_id;		/* resource id */
++	uint8_t  nfgen_family;		/* AF_xxx */
++	uint8_t  version;		/* nfnetlink version */
++	uint16_t    res_id;		/* resource id */
+ };
+ 
+ #define NFNETLINK_V0	0
+@@ -59,7 +60,7 @@ struct nfnl_callback
+ 	int (*call)(struct sock *nl, struct sk_buff *skb, 
+ 		struct nlmsghdr *nlh, struct nlattr *cda[]);
+ 	const struct nla_policy *policy;	/* netlink attribute policy */
+-	const u_int16_t attr_count;		/* number of nlattr's */
++	const uint16_t attr_count;		/* number of nlattr's */
+ };
+ 
+ struct nfnetlink_subsystem
+@@ -76,7 +77,7 @@ extern int nfnetlink_subsys_unregister(const struct nfnetlink_subsystem *n);
+ extern int nfnetlink_has_listeners(unsigned int group);
+ extern int nfnetlink_send(struct sk_buff *skb, u32 pid, unsigned group, 
+ 			  int echo);
+-extern int nfnetlink_unicast(struct sk_buff *skb, u_int32_t pid, int flags);
++extern int nfnetlink_unicast(struct sk_buff *skb, uint32_t pid, int flags);
+ 
+ #define MODULE_ALIAS_NFNL_SUBSYS(subsys) \
+ 	MODULE_ALIAS("nfnetlink-subsys-" __stringify(subsys))
+diff --git a/include/libnfnetlink/linux_nfnetlink_compat.h b/include/libnfnetlink/linux_nfnetlink_compat.h
+index e145176..cd094fc 100644
+--- a/include/libnfnetlink/linux_nfnetlink_compat.h
++++ b/include/libnfnetlink/linux_nfnetlink_compat.h
+@@ -3,6 +3,8 @@
+ #ifndef __KERNEL__
+ /* Old nfnetlink macros for userspace */
+ 
++#include <stdint.h>
++
+ /* nfnetlink groups: Up to 32 maximum */
+ #define NF_NETLINK_CONNTRACK_NEW 		0x00000001
+ #define NF_NETLINK_CONNTRACK_UPDATE		0x00000002
+@@ -20,8 +22,8 @@
+ 
+ struct nfattr
+ {
+-	u_int16_t nfa_len;
+-	u_int16_t nfa_type;	/* we use 15 bits for the type, and the highest
++	uint16_t nfa_len;
++	uint16_t nfa_type;	/* we use 15 bits for the type, and the highest
+ 				 * bit to indicate whether the payload is nested */
+ };
+ 
+diff --git a/src/iftable.c b/src/iftable.c
+index 5976ed8..3411c4c 100644
+--- a/src/iftable.c
++++ b/src/iftable.c
+@@ -9,6 +9,7 @@
+ /* IFINDEX handling */
+ 
+ #include <unistd.h>
++#include <stdint.h>
+ #include <stdlib.h>
+ #include <stdio.h>
+ #include <string.h>
+@@ -27,10 +28,10 @@
+ struct ifindex_node {
+ 	struct list_head head;
+ 
+-	u_int32_t	index;
+-	u_int32_t	type;
+-	u_int32_t	alen;
+-	u_int32_t	flags;
++	uint32_t	index;
++	uint32_t	type;
++	uint32_t	alen;
++	uint32_t	flags;
+ 	char		addr[8];
+ 	char		name[16];
+ };
+diff --git a/src/iftable.h b/src/iftable.h
+index 8df7f24..0cc5335 100644
+--- a/src/iftable.h
++++ b/src/iftable.h
+@@ -1,8 +1,10 @@
+ #ifndef _IFTABLE_H
+ #define _IFTABLE_H
+ 
+-int iftable_delete(u_int32_t dst, u_int32_t mask, u_int32_t gw, u_int32_t oif);
+-int iftable_insert(u_int32_t dst, u_int32_t mask, u_int32_t gw, u_int32_t oif);
++#include <stdint.h>
++
++int iftable_delete(uint32_t dst, uint32_t mask, uint32_t gw, uint32_t oif);
++int iftable_insert(uint32_t dst, uint32_t mask, uint32_t gw, uint32_t oif);
+ 
+ int iftable_init(void);
+ void iftable_fini(void);
+diff --git a/src/libnfnetlink.c b/src/libnfnetlink.c
+index 398b7d7..b8958dc 100644
+--- a/src/libnfnetlink.c
++++ b/src/libnfnetlink.c
+@@ -36,6 +36,7 @@
+  * 	minor cleanups
+  */
+ 
++#include <stdint.h>
+ #include <stdlib.h>
+ #include <stdio.h>
+ #include <unistd.h>
+@@ -72,9 +73,9 @@
+ 
+ struct nfnl_subsys_handle {
+ 	struct nfnl_handle 	*nfnlh;
+-	u_int32_t		subscriptions;
+-	u_int8_t		subsys_id;
+-	u_int8_t		cb_count;
++	uint32_t		subscriptions;
++	uint8_t		subsys_id;
++	uint8_t		cb_count;
+ 	struct nfnl_callback 	*cb;	/* array of callbacks */
+ };
+ 
+@@ -86,11 +87,11 @@ struct nfnl_handle {
+ 	int			fd;
+ 	struct sockaddr_nl	local;
+ 	struct sockaddr_nl	peer;
+-	u_int32_t		subscriptions;
+-	u_int32_t		seq;
+-	u_int32_t		dump;
+-	u_int32_t		rcv_buffer_size;	/* for nfnl_catch */
+-	u_int32_t		flags;
++	uint32_t		subscriptions;
++	uint32_t		seq;
++	uint32_t		dump;
++	uint32_t		rcv_buffer_size;	/* for nfnl_catch */
++	uint32_t		flags;
+ 	struct nlmsghdr 	*last_nlhdr;
+ 	struct nfnl_subsys_handle subsys[NFNL_MAX_SUBSYS+1];
+ };
+@@ -145,7 +146,7 @@ unsigned int nfnl_portid(const struct nfnl_handle *h)
+ static int recalc_rebind_subscriptions(struct nfnl_handle *nfnlh)
+ {
+ 	int i, err;
+-	u_int32_t new_subscriptions = nfnlh->subscriptions;
++	uint32_t new_subscriptions = nfnlh->subscriptions;
+ 
+ 	for (i = 0; i < NFNL_MAX_SUBSYS; i++)
+ 		new_subscriptions |= nfnlh->subsys[i].subscriptions;
+@@ -273,8 +274,8 @@ void nfnl_set_rcv_buffer_size(struct nfnl_handle *h, unsigned int size)
+  * a valid address that points to a nfnl_subsys_handle structure is returned.
+  */
+ struct nfnl_subsys_handle *
+-nfnl_subsys_open(struct nfnl_handle *nfnlh, u_int8_t subsys_id,
+-		 u_int8_t cb_count, u_int32_t subscriptions)
++nfnl_subsys_open(struct nfnl_handle *nfnlh, uint8_t subsys_id,
++		 uint8_t cb_count, uint32_t subscriptions)
+ {
+ 	struct nfnl_subsys_handle *ssh;
+ 
+@@ -435,10 +436,10 @@ int nfnl_sendiov(const struct nfnl_handle *nfnlh, const struct iovec *iov,
+  */
+ void nfnl_fill_hdr(struct nfnl_subsys_handle *ssh,
+ 		    struct nlmsghdr *nlh, unsigned int len, 
+-		    u_int8_t family,
+-		    u_int16_t res_id,
+-		    u_int16_t msg_type,
+-		    u_int16_t msg_flags)
++		    uint8_t family,
++		    uint16_t res_id,
++		    uint16_t msg_type,
++		    uint16_t msg_flags)
+ {
+ 	assert(ssh);
+ 	assert(nlh);
+@@ -849,14 +850,14 @@ int nfnl_nfa_addattr_l(struct nfattr *nfa, int maxlen, int type,
+ }
+ 
+ /**
+- * nfnl_addattr8 - Add u_int8_t attribute to nlmsghdr
++ * nfnl_addattr8 - Add uint8_t attribute to nlmsghdr
+  *
+  * @n: netlink message header to which attribute is to be added
+  * @maxlen: maximum length of netlink message header
+  * @type: type of new attribute
+  * @data: content of new attribute
+  */
+-int nfnl_addattr8(struct nlmsghdr *n, int maxlen, int type, u_int8_t data)
++int nfnl_addattr8(struct nlmsghdr *n, int maxlen, int type, uint8_t data)
+ {
+ 	assert(n);
+ 	assert(maxlen > 0);
+@@ -866,7 +867,7 @@ int nfnl_addattr8(struct nlmsghdr *n, int maxlen, int type, u_int8_t data)
+ }
+ 
+ /**
+- * nfnl_nfa_addattr16 - Add u_int16_t attribute to struct nfattr 
++ * nfnl_nfa_addattr16 - Add uint16_t attribute to struct nfattr
+  *
+  * @nfa: struct nfattr
+  * @maxlen: maximal length of nfattr buffer
+@@ -875,7 +876,7 @@ int nfnl_addattr8(struct nlmsghdr *n, int maxlen, int type, u_int8_t data)
+  *
+  */
+ int nfnl_nfa_addattr16(struct nfattr *nfa, int maxlen, int type, 
+-		       u_int16_t data)
++		       uint16_t data)
+ {
+ 	assert(nfa);
+ 	assert(maxlen > 0);
+@@ -885,7 +886,7 @@ int nfnl_nfa_addattr16(struct nfattr *nfa, int maxlen, int type,
+ }
+ 
+ /**
+- * nfnl_addattr16 - Add u_int16_t attribute to nlmsghdr
++ * nfnl_addattr16 - Add uint16_t attribute to nlmsghdr
+  *
+  * @n: netlink message header to which attribute is to be added
+  * @maxlen: maximum length of netlink message header
+@@ -894,7 +895,7 @@ int nfnl_nfa_addattr16(struct nfattr *nfa, int maxlen, int type,
+  *
+  */
+ int nfnl_addattr16(struct nlmsghdr *n, int maxlen, int type,
+-		   u_int16_t data)
++		   uint16_t data)
+ {
+ 	assert(n);
+ 	assert(maxlen > 0);
+@@ -904,7 +905,7 @@ int nfnl_addattr16(struct nlmsghdr *n, int maxlen, int type,
+ }
+ 
+ /**
+- * nfnl_nfa_addattr32 - Add u_int32_t attribute to struct nfattr 
++ * nfnl_nfa_addattr32 - Add uint32_t attribute to struct nfattr
+  *
+  * @nfa: struct nfattr
+  * @maxlen: maximal length of nfattr buffer
+@@ -913,7 +914,7 @@ int nfnl_addattr16(struct nlmsghdr *n, int maxlen, int type,
+  *
+  */
+ int nfnl_nfa_addattr32(struct nfattr *nfa, int maxlen, int type, 
+-		       u_int32_t data)
++		       uint32_t data)
+ {
+ 	assert(nfa);
+ 	assert(maxlen > 0);
+@@ -923,7 +924,7 @@ int nfnl_nfa_addattr32(struct nfattr *nfa, int maxlen, int type,
+ }
+ 
+ /**
+- * nfnl_addattr32 - Add u_int32_t attribute to nlmsghdr
++ * nfnl_addattr32 - Add uint32_t attribute to nlmsghdr
+  *
+  * @n: netlink message header to which attribute is to be added
+  * @maxlen: maximum length of netlink message header
+@@ -932,7 +933,7 @@ int nfnl_nfa_addattr32(struct nfattr *nfa, int maxlen, int type,
+  *
+  */
+ int nfnl_addattr32(struct nlmsghdr *n, int maxlen, int type,
+-		   u_int32_t data)
++		   uint32_t data)
+ {
+ 	assert(n);
+ 	assert(maxlen > 0);
+@@ -980,7 +981,7 @@ int nfnl_parse_attr(struct nfattr *tb[], int max, struct nfattr *nfa, int len)
+  *
+  */ 
+ void nfnl_build_nfa_iovec(struct iovec *iov, struct nfattr *nfa, 
+-			  u_int16_t type, u_int32_t len, unsigned char *val)
++			  uint16_t type, uint32_t len, unsigned char *val)
+ {
+ 	assert(iov);
+ 	assert(nfa);
+@@ -1115,7 +1116,7 @@ struct nlmsghdr *nfnl_get_msg_next(struct nfnl_handle *h,
+  * appropiately.
+  */
+ int nfnl_callback_register(struct nfnl_subsys_handle *ssh,
+-			   u_int8_t type, struct nfnl_callback *cb)
++			   uint8_t type, struct nfnl_callback *cb)
+ {
+ 	assert(ssh);
+ 	assert(cb);
+@@ -1138,7 +1139,7 @@ int nfnl_callback_register(struct nfnl_subsys_handle *ssh,
+  * On sucess, 0 is returned. On error, -1 is returned and errno is
+  * set appropiately.
+  */
+-int nfnl_callback_unregister(struct nfnl_subsys_handle *ssh, u_int8_t type)
++int nfnl_callback_unregister(struct nfnl_subsys_handle *ssh, uint8_t type)
+ {
+ 	assert(ssh);
+ 
+@@ -1161,8 +1162,8 @@ int nfnl_check_attributes(const struct nfnl_handle *h,
+ 	assert(nfa);
+ 
+ 	int min_len;
+-	u_int8_t type = NFNL_MSG_TYPE(nlh->nlmsg_type);
+-	u_int8_t subsys_id = NFNL_SUBSYS_ID(nlh->nlmsg_type);
++	uint8_t type = NFNL_MSG_TYPE(nlh->nlmsg_type);
++	uint8_t subsys_id = NFNL_SUBSYS_ID(nlh->nlmsg_type);
+ 	const struct nfnl_subsys_handle *ssh;
+ 	struct nfnl_callback *cb;
+ 
+@@ -1212,8 +1213,8 @@ static int __nfnl_handle_msg(struct nfnl_handle *h, struct nlmsghdr *nlh,
+ 			     int len)
+ {
+ 	struct nfnl_subsys_handle *ssh;
+-	u_int8_t type = NFNL_MSG_TYPE(nlh->nlmsg_type);
+-	u_int8_t subsys_id = NFNL_SUBSYS_ID(nlh->nlmsg_type);
++	uint8_t type = NFNL_MSG_TYPE(nlh->nlmsg_type);
++	uint8_t subsys_id = NFNL_SUBSYS_ID(nlh->nlmsg_type);
+ 	int err = 0;
+ 
+ 	if (subsys_id > NFNL_MAX_SUBSYS)
+@@ -1243,7 +1244,7 @@ int nfnl_handle_packet(struct nfnl_handle *h, char *buf, int len)
+ {
+ 
+ 	while (len >= NLMSG_SPACE(0)) {
+-		u_int32_t rlen;
++		uint32_t rlen;
+ 		struct nlmsghdr *nlh = (struct nlmsghdr *)buf;
+ 
+ 		if (nlh->nlmsg_len < sizeof(struct nlmsghdr)
+@@ -1285,8 +1286,8 @@ static int nfnl_is_error(struct nfnl_handle *h, struct nlmsghdr *nlh)
+ static int nfnl_step(struct nfnl_handle *h, struct nlmsghdr *nlh)
+ {
+ 	struct nfnl_subsys_handle *ssh;
+-	u_int8_t type = NFNL_MSG_TYPE(nlh->nlmsg_type);
+-	u_int8_t subsys_id = NFNL_SUBSYS_ID(nlh->nlmsg_type);
++	uint8_t type = NFNL_MSG_TYPE(nlh->nlmsg_type);
++	uint8_t subsys_id = NFNL_SUBSYS_ID(nlh->nlmsg_type);
+ 
+ 	/* Is this an error message? */
+ 	if (nfnl_is_error(h, nlh)) {
+diff --git a/src/rtnl.c b/src/rtnl.c
+index 7b4ac7d..34802fe 100644
+--- a/src/rtnl.c
++++ b/src/rtnl.c
+@@ -11,6 +11,7 @@
+ /* rtnetlink - routing table netlink interface */
+ 
+ #include <unistd.h>
++#include <stdint.h>
+ #include <stdlib.h>
+ #include <string.h>
+ #include <errno.h>
+@@ -30,7 +31,7 @@
+ #define rtnl_log(x, ...)
+ 
+ static inline struct rtnl_handler *
+-find_handler(struct rtnl_handle *rtnl_handle, u_int16_t type)
++find_handler(struct rtnl_handle *rtnl_handle, uint16_t type)
+ {
+ 	struct rtnl_handler *h;
+ 	for (h = rtnl_handle->handlers; h; h = h->next) {
+@@ -41,7 +42,7 @@ find_handler(struct rtnl_handle *rtnl_handle, u_int16_t type)
+ }
+ 
+ static int call_handler(struct rtnl_handle *rtnl_handle,
+-			u_int16_t type,
++			uint16_t type,
+ 			struct nlmsghdr *hdr)
+ {
+ 	struct rtnl_handler *h = find_handler(rtnl_handle, type);
+diff --git a/src/rtnl.h b/src/rtnl.h
+index 0c403dc..9858ae5 100644
+--- a/src/rtnl.h
++++ b/src/rtnl.h
+@@ -1,13 +1,14 @@
+ #ifndef _RTNL_H
+ #define _RTNL_H
+ 
++#include <stdint.h>
+ #include <linux/types.h>
+ #include <linux/rtnetlink.h>
+ 
+ struct rtnl_handler {
+ 	struct rtnl_handler *next;
+ 
+-	u_int16_t	nlmsg_type;
++	uint16_t	nlmsg_type;
+ 	int		(*handlefn)(struct nlmsghdr *h, void *arg);
+ 	void		*arg;
+ };
diff --git a/pkgs/development/libraries/libnfnetlink/default.nix b/pkgs/development/libraries/libnfnetlink/default.nix
index be60612a4ff2..5395b5b2e99c 100644
--- a/pkgs/development/libraries/libnfnetlink/default.nix
+++ b/pkgs/development/libraries/libnfnetlink/default.nix
@@ -8,6 +8,10 @@ stdenv.mkDerivation rec {
     sha256 = "06mm2x4b01k3m7wnrxblk9j0mybyr4pfz28ml7944xhjx6fy2w7j";
   };
 
+  patches = [
+    ./Use-stdlib-uint-instead-of-u_int.patch
+  ];
+
   meta = {
     description = "Low-level library for netfilter related kernel/userspace communication";
     longDescription = ''
diff --git a/pkgs/development/libraries/libnsl/cdefs.patch b/pkgs/development/libraries/libnsl/cdefs.patch
new file mode 100644
index 000000000000..dbbe800a3479
--- /dev/null
+++ b/pkgs/development/libraries/libnsl/cdefs.patch
@@ -0,0 +1,30 @@
+--- a/src/rpcsvc/nislib.h
++++ b/src/rpcsvc/nislib.h
+@@ -19,6 +19,7 @@
+ #ifndef	__RPCSVC_NISLIB_H__
+ #define	__RPCSVC_NISLIB_H__
+ 
++#include <sys/cdefs.h>
+ #include <features.h>
+ 
+ __BEGIN_DECLS
+--- a/src/rpcsvc/ypclnt.h
++++ b/src/rpcsvc/ypclnt.h
+@@ -20,6 +20,7 @@
+ #ifndef	__RPCSVC_YPCLNT_H__
+ #define	__RPCSVC_YPCLNT_H__
+ 
++#include <sys/cdefs.h>
+ #include <features.h>
+ 
+ /* Some defines */
+--- a/src/rpcsvc/ypupd.h
++++ b/src/rpcsvc/ypupd.h
+@@ -33,6 +33,7 @@
+ #ifndef __RPCSVC_YPUPD_H__
+ #define __RPCSVC_YPUPD_H__
+ 
++#include <sys/cdefs.h>
+ #include <features.h>
+ 
+ #include <rpc/rpc.h>
diff --git a/pkgs/development/libraries/libnsl/default.nix b/pkgs/development/libraries/libnsl/default.nix
index d4af280c3cd8..9e8a46b2e6b3 100644
--- a/pkgs/development/libraries/libnsl/default.nix
+++ b/pkgs/development/libraries/libnsl/default.nix
@@ -14,6 +14,8 @@ stdenv.mkDerivation rec {
   nativeBuildInputs = [ autoreconfHook pkgconfig ];
   buildInputs = [ libtirpc ];
 
+  patches = stdenv.lib.optionals stdenv.hostPlatform.isMusl [ ./cdefs.patch ./nis_h.patch ];
+
   meta = with stdenv.lib; {
     description = "Client interface library for NIS(YP) and NIS+";
     homepage = https://github.com/thkukuk/libnsl;
diff --git a/pkgs/development/libraries/libnsl/nis_h.patch b/pkgs/development/libraries/libnsl/nis_h.patch
new file mode 100644
index 000000000000..199259df2e8d
--- /dev/null
+++ b/pkgs/development/libraries/libnsl/nis_h.patch
@@ -0,0 +1,45 @@
+--- a/src/rpcsvc/nis.h
++++ b/src/rpcsvc/nis.h
+@@ -32,6 +32,7 @@
+ #ifndef _RPCSVC_NIS_H
+ #define _RPCSVC_NIS_H 1
+ 
++#include <sys/cdefs.h>
+ #include <features.h>
+ #include <rpc/rpc.h>
+ #include <rpcsvc/nis_tags.h>
+@@ -56,6 +57,34 @@
+  *                                              <kukuk@suse.de>
+  */
+ 
++#ifndef rawmemchr
++#define rawmemchr(s,c) memchr((s),(size_t)-1,(c))
++#endif
++
++#ifndef __asprintf
++#define __asprintf asprintf
++#endif
++
++#ifndef __mempcpy
++#define __mempcpy mempcpy
++#endif
++
++#ifndef __strtok_r
++#define __strtok_r strtok_r
++#endif
++
++#ifndef __always_inline
++#define __always_inline __attribute__((__always_inline__))
++#endif
++
++#ifndef TEMP_FAILURE_RETRY
++#define TEMP_FAILURE_RETRY(exp) ({ \
++typeof (exp) _rc; \
++ do { \
++  _rc = (exp); \
++ } while (_rc == -1 && errno == EINTR); \
++ _rc; })
++#endif
+ 
+ #ifndef __nis_object_h
+ #define __nis_object_h
diff --git a/pkgs/development/libraries/libproxy/default.nix b/pkgs/development/libraries/libproxy/default.nix
index 614890e929f7..bf9e2d079cd6 100644
--- a/pkgs/development/libraries/libproxy/default.nix
+++ b/pkgs/development/libraries/libproxy/default.nix
@@ -1,5 +1,6 @@
-{ stdenv, lib, fetchFromGitHub, pkgconfig, cmake
-, dbus, networkmanager, spidermonkey_38, pcre, python2, python3 }:
+{ stdenv, lib, fetchFromGitHub, pkgconfig, cmake, zlib
+, dbus, networkmanager, spidermonkey_38, pcre, python2, python3
+, SystemConfiguration, CoreFoundation, JavaScriptCore }:
 
 stdenv.mkDerivation rec {
   name = "libproxy-${version}";
@@ -16,7 +17,10 @@ stdenv.mkDerivation rec {
 
   nativeBuildInputs = [ pkgconfig cmake ];
 
-  buildInputs = [ dbus networkmanager spidermonkey_38 pcre python2 python3 ];
+  buildInputs = [ pcre python2 python3 zlib ]
+        ++ (if stdenv.hostPlatform.isDarwin
+            then [ SystemConfiguration CoreFoundation JavaScriptCore ]
+            else [ spidermonkey_38 dbus networkmanager ]);
 
   preConfigure = ''
     cmakeFlagsArray+=(
@@ -27,7 +31,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = with stdenv.lib; {
-    platforms = platforms.linux;
+    platforms = platforms.linux ++ platforms.darwin;
     license = licenses.lgpl21;
     homepage = http://libproxy.github.io/libproxy/;
     description = "A library that provides automatic proxy configuration management";
diff --git a/pkgs/development/libraries/librevenge/default.nix b/pkgs/development/libraries/librevenge/default.nix
index 3523eb5c37bc..2c6e792ae8ce 100644
--- a/pkgs/development/libraries/librevenge/default.nix
+++ b/pkgs/development/libraries/librevenge/default.nix
@@ -21,11 +21,10 @@ stdenv.mkDerivation {
     inherit (s) url sha256;
   };
 
-  # Clang generates warnings in Boost's header files
+  # Clang and gcc-7 generate warnings, and
   # -Werror causes these warnings to be interpreted as errors
   # Simplest solution: disable -Werror
-  configureFlags = if stdenv.cc.isClang
-    then [ "--disable-werror" ] else null;
+  configureFlags = [ "--disable-werror" ];
 
   # Fix an issue with boost 1.59
   # This is fixed upstream so please remove this when updating
diff --git a/pkgs/development/libraries/librsvg/default.nix b/pkgs/development/libraries/librsvg/default.nix
index 09a0f4444b54..cf43bb951929 100644
--- a/pkgs/development/libraries/librsvg/default.nix
+++ b/pkgs/development/libraries/librsvg/default.nix
@@ -1,16 +1,22 @@
 { lib, stdenv, fetchurl, pkgconfig, glib, gdk_pixbuf, pango, cairo, libxml2, libgsf
-, bzip2, libcroco, libintlOrEmpty, darwin
+, bzip2, libcroco, libintlOrEmpty, darwin, rust
 , withGTK ? false, gtk3 ? null
 , gobjectIntrospection ? null, enableIntrospection ? false }:
 
 # no introspection by default, it's too big
 
+let
+  version = "2.42.2";
+  releaseVersion = (lib.concatStringsSep "." (lib.lists.take 2
+    (lib.splitString "." version)));
+
+in
 stdenv.mkDerivation rec {
-  name = "librsvg-2.40.19";
+  name = "librsvg-${version}";
 
   src = fetchurl {
-    url    = "mirror://gnome/sources/librsvg/2.40/librsvg-2.40.18.tar.xz";
-    sha256 = "0k2nbd4g31qinkdfd8r5c5ih2ixl85fbkgkqqh9747lwr24c9j5z";
+    url    = "mirror://gnome/sources/librsvg/${releaseVersion}/${name}.tar.xz";
+    sha256 = "0c550a0bffef768a436286116c03d9f6cd3f97f5021c13e7f093b550fac12562";
   };
 
   NIX_LDFLAGS = if stdenv.isDarwin then "-lintl" else null;
@@ -22,7 +28,7 @@ stdenv.mkDerivation rec {
 
   propagatedBuildInputs = [ glib gdk_pixbuf cairo ] ++ lib.optional withGTK gtk3;
 
-  nativeBuildInputs = [ pkgconfig ]
+  nativeBuildInputs = [ pkgconfig rust.rustc rust.cargo ]
     ++ lib.optionals stdenv.isDarwin (with darwin.apple_sdk.frameworks; [
       ApplicationServices
     ]);
diff --git a/pkgs/development/libraries/libtasn1/default.nix b/pkgs/development/libraries/libtasn1/default.nix
index ccdc3aba6118..cc5b19f7a595 100644
--- a/pkgs/development/libraries/libtasn1/default.nix
+++ b/pkgs/development/libraries/libtasn1/default.nix
@@ -1,21 +1,13 @@
 { stdenv, fetchurl, perl, texinfo }:
 
 stdenv.mkDerivation rec {
-  name = "libtasn1-4.12";
+  name = "libtasn1-4.13";
 
   src = fetchurl {
     url = "mirror://gnu/libtasn1/${name}.tar.gz";
-    sha256 = "0ls7jdq3y5fnrwg0pzhq11m21r8pshac2705bczz6mqjc8pdllv7";
+    sha256 = "1jlc1iahj8k3haz28j55nzg7sgni5h41vqy461i1bpbx6668wlky";
   };
 
-  patches = [
-    (fetchurl {
-      name = "CVE-2017-10790.patch";
-      url = "https://git.savannah.gnu.org/gitweb/?p=libtasn1.git;a=patch;h=d8d805e1f2e6799bb2dff4871a8598dc83088a39";
-      sha256 = "1v5w0dazp9qc2v7pc8b6g7s4dz5ak10hzrn35hx66q76yzrrzp7i";
-    })
-  ];
-
   outputs = [ "out" "dev" "devdoc" ];
   outputBin = "dev";
 
diff --git a/pkgs/development/libraries/libunique/default.nix b/pkgs/development/libraries/libunique/default.nix
index a5adaa9ac179..1bef76836542 100644
--- a/pkgs/development/libraries/libunique/default.nix
+++ b/pkgs/development/libraries/libunique/default.nix
@@ -13,7 +13,8 @@ stdenv.mkDerivation rec {
     ./1.1.6-fix-test.patch
     ./1.1.6-G_CONST_RETURN.patch
     ./1.1.6-include-terminator.patch
-  ];
+  ]
+    ++ [ ./gcc7-bug.patch ];
 
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ glib gtk2 dbus_glib ];
@@ -24,7 +25,7 @@ stdenv.mkDerivation rec {
   doCheck = true;
 
   meta = {
-    homepage = http://live.gnome.org/LibUnique;
+    homepage = https://wiki.gnome.org/Attic/LibUnique;
     description = "A library for writing single instance applications";
     license = stdenv.lib.licenses.lgpl21;
     platforms = stdenv.lib.platforms.linux;
diff --git a/pkgs/development/libraries/libunique/gcc7-bug.patch b/pkgs/development/libraries/libunique/gcc7-bug.patch
new file mode 100644
index 000000000000..2b0587510bc0
--- /dev/null
+++ b/pkgs/development/libraries/libunique/gcc7-bug.patch
@@ -0,0 +1,18 @@
+gcc-7 newly detects this class of bugs.
+In this particular case it's clear that the inention was
+to detect if the string is non-NULL *and* non-empty.
+
+
+diff --git a/unique/uniqueapp.c b/unique/uniqueapp.c
+index b40a86c..66a7226 100644
+--- a/unique/uniqueapp.c
++++ b/unique/uniqueapp.c
+@@ -176,7 +176,7 @@ set_startup_id (UniqueBackend *backend,
+ {
+   gchar *id;
+ 
+-  if (startup_id && startup_id != '\0')
++  if (startup_id && *startup_id != '\0')
+     id = g_strdup (startup_id);
+   else
+     {
diff --git a/pkgs/development/libraries/libunistring/default.nix b/pkgs/development/libraries/libunistring/default.nix
index e1b8c04b4ce5..8d1f5115bdf0 100644
--- a/pkgs/development/libraries/libunistring/default.nix
+++ b/pkgs/development/libraries/libunistring/default.nix
@@ -17,7 +17,7 @@ stdenv.mkDerivation rec {
     "--with-libiconv-prefix=${libiconv}"
   ];
 
-  doCheck = true;
+  doCheck = !stdenv.hostPlatform.isMusl;
 
   enableParallelBuilding = true;
 
diff --git a/pkgs/development/libraries/libunwind/backtrace-only-with-glibc.patch b/pkgs/development/libraries/libunwind/backtrace-only-with-glibc.patch
new file mode 100644
index 000000000000..5fcaa72c0c01
--- /dev/null
+++ b/pkgs/development/libraries/libunwind/backtrace-only-with-glibc.patch
@@ -0,0 +1,45 @@
+From 04437142399662b576bd55a85485c6dcc14d0812 Mon Sep 17 00:00:00 2001
+From: Khem Raj <raj.khem at gmail.com>
+Date: Thu, 31 Dec 2015 06:44:07 +0000
+Subject: [PATCH] backtrace: Use only with glibc and uclibc
+
+backtrace API is glibc specific not linux specific
+so make it behave so.
+
+Signed-off-by: Khem Raj <raj.khem at gmail.com>
+---
+Upstream-Status: Pending
+
+ tests/test-coredump-unwind.c | 4 +++-
+ 1 file changed, 3 insertions(+), 1 deletion(-)
+
+diff --git a/tests/test-coredump-unwind.c b/tests/test-coredump-unwind.c
+index 5254708..8767b42 100644
+--- a/tests/test-coredump-unwind.c
++++ b/tests/test-coredump-unwind.c
+@@ -57,7 +57,9 @@
+ #include <grp.h>
+ 
+ /* For SIGSEGV handler code */
++#ifdef __GLIBC__
+ #include <execinfo.h>
++#endif
+ #include <sys/ucontext.h>
+ 
+ #include <libunwind-coredump.h>
+@@ -238,11 +240,11 @@ void handle_sigsegv(int sig, siginfo_t *info, void *ucontext)
+ 			ip);
+ 
+   {
++#ifdef __GLIBC__
+     /* glibc extension */
+     void *array[50];
+     int size;
+     size = backtrace(array, 50);
+-#ifdef __linux__
+     backtrace_symbols_fd(array, size, 2);
+ #endif
+   }
+-- 
+2.6.4
+
diff --git a/pkgs/development/libraries/libunwind/default.nix b/pkgs/development/libraries/libunwind/default.nix
index 8565bc75ff9f..6afdac3fdf5c 100644
--- a/pkgs/development/libraries/libunwind/default.nix
+++ b/pkgs/development/libraries/libunwind/default.nix
@@ -11,6 +11,7 @@ stdenv.mkDerivation rec {
 
   patches = [
     ./version-1.2.1.patch
+    ./backtrace-only-with-glibc.patch
   ];
 
   nativeBuildInputs = [ autoreconfHook ];
diff --git a/pkgs/development/libraries/libusb/default.nix b/pkgs/development/libraries/libusb/default.nix
index 1fd3cb39bbff..4704a1e5c331 100644
--- a/pkgs/development/libraries/libusb/default.nix
+++ b/pkgs/development/libraries/libusb/default.nix
@@ -14,6 +14,8 @@ stdenv.mkDerivation {
     sha256 = "0nn5icrfm9lkhzw1xjvaks9bq3w6mjg86ggv3fn7kgi4nfvg8kj0";
   };
 
+  patches = stdenv.lib.optional stdenv.hostPlatform.isMusl ./fix-headers.patch;
+
   meta = {
     platforms = stdenv.lib.platforms.unix;
   };
diff --git a/pkgs/development/libraries/libusb/fix-headers.patch b/pkgs/development/libraries/libusb/fix-headers.patch
new file mode 100644
index 000000000000..ea9cbc34978e
--- /dev/null
+++ b/pkgs/development/libraries/libusb/fix-headers.patch
@@ -0,0 +1,10 @@
+--- libusb-compat-0.1.5.orig/libusb/usb.h
++++ libusb-compat-0.1.5/libusb/usb.h
+@@ -25,6 +25,7 @@
+ #ifndef __USB_H__
+ #define __USB_H__
+ 
++#include <sys/types.h>
+ #include <unistd.h>
+ #include <stdlib.h>
+ #include <limits.h>
diff --git a/pkgs/development/libraries/libuv/default.nix b/pkgs/development/libraries/libuv/default.nix
index 4075505f8dd8..59fd95eefeee 100644
--- a/pkgs/development/libraries/libuv/default.nix
+++ b/pkgs/development/libraries/libuv/default.nix
@@ -2,14 +2,14 @@
 , ApplicationServices, CoreServices }:
 
 stdenv.mkDerivation rec {
-  version = "1.18.0";
+  version = "1.19.1";
   name = "libuv-${version}";
 
   src = fetchFromGitHub {
     owner = "libuv";
     repo = "libuv";
     rev = "v${version}";
-    sha256 = "0s71c2y4ll3vp463hsdk74q4hr7wprkxc2a4agw3za2hhzcb95pd";
+    sha256 = "020jap4xvjns1rgb2kvpf1nib3f2d5fyqh04afgkk32hiag0kn66";
   };
 
   postPatch = let
diff --git a/pkgs/development/libraries/libwps/default.nix b/pkgs/development/libraries/libwps/default.nix
index 73fe5b55ab45..37ff9d098c5c 100644
--- a/pkgs/development/libraries/libwps/default.nix
+++ b/pkgs/development/libraries/libwps/default.nix
@@ -12,6 +12,8 @@ stdenv.mkDerivation rec {
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ boost librevenge zlib ];
 
+  NIX_CFLAGS_COMPILE = [ "-Wno-error=implicit-fallthrough" ]; # newly detected by gcc-7
+
   meta = with stdenv.lib; {
     homepage = http://libwps.sourceforge.net/;
     description = "Microsoft Works document format import filter library";
diff --git a/pkgs/development/libraries/libxml2/default.nix b/pkgs/development/libraries/libxml2/default.nix
index b19f4a2953f1..c4f3ff1efdd5 100644
--- a/pkgs/development/libraries/libxml2/default.nix
+++ b/pkgs/development/libraries/libxml2/default.nix
@@ -36,7 +36,8 @@ in stdenv.mkDerivation rec {
 
   enableParallelBuilding = true;
 
-  doCheck = (stdenv.hostPlatform == stdenv.buildPlatform) && !stdenv.isDarwin;
+  doCheck = (stdenv.hostPlatform == stdenv.buildPlatform) && !stdenv.isDarwin &&
+    hostPlatform.libc != "musl";
 
   crossAttrs = lib.optionalAttrs (hostPlatform.libc == "msvcrt") {
     # creating the DLL is broken ATM
diff --git a/pkgs/development/libraries/libyaml-cpp/default.nix b/pkgs/development/libraries/libyaml-cpp/default.nix
index f02843707265..fc4c280d47c2 100644
--- a/pkgs/development/libraries/libyaml-cpp/default.nix
+++ b/pkgs/development/libraries/libyaml-cpp/default.nix
@@ -2,28 +2,26 @@
 
 stdenv.mkDerivation rec {
   name = "libyaml-cpp-${version}";
-  version = "0.5.3";
+  version = "0.6.1";
 
   src = fetchFromGitHub {
     owner = "jbeder";
     repo = "yaml-cpp";
-    rev = "release-${version}";
-    sha256 = "0qr286q8mwbr4cxz0y0rf045zc071qh3cb804by6w1ydlqciih8a";
+    rev = "yaml-cpp-${version}";
+    sha256 = "16x53p9gfch7gpyg865j7m1zhqsixx2hbbd206ffjv0ip8cjipjf";
   };
 
   outputs = [ "out" "dev" ];
 
-  buildInputs = [ cmake boost ];
+  nativeBuildInputs = [ cmake ];
 
   cmakeFlags = "-DBUILD_SHARED_LIBS=ON";
 
-  enableParallelBuilding = true;
-
   meta = with stdenv.lib; {
     inherit (src.meta) homepage;
     description = "A YAML parser and emitter for C++";
     license = licenses.mit;
     platforms = platforms.unix;
-    maintainers = with maintainers; [ wkennington ];
+    maintainers = with maintainers; [ andir ];
   };
 }
diff --git a/pkgs/development/libraries/mbedtls/darwin_dylib.patch b/pkgs/development/libraries/mbedtls/darwin_dylib.patch
new file mode 100644
index 000000000000..bc6992d6e779
--- /dev/null
+++ b/pkgs/development/libraries/mbedtls/darwin_dylib.patch
@@ -0,0 +1,28 @@
+diff --git a/library/Makefile b/library/Makefile
+index 28f9231..ad9cc32 100644
+--- a/library/Makefile
++++ b/library/Makefile
+@@ -103,9 +103,9 @@ libmbedtls.so: libmbedtls.$(SOEXT_TLS)
+ 	echo "  LN    $@ -> $<"
+ 	ln -sf $< $@
+ 
+-libmbedtls.dylib: $(OBJS_TLS)
++libmbedtls.dylib: $(OBJS_TLS) libmbedx509.dylib
+ 	echo "  LD    $@"
+-	$(CC) -dynamiclib $(LOCAL_LDFLAGS) $(LDFLAGS) -o $@ $(OBJS_TLS)
++	$(CC) -dynamiclib -L. -lmbedcrypto -lmbedx509 $(LOCAL_LDFLAGS) $(LDFLAGS) -o $@ $(OBJS_TLS)
+ 
+ libmbedtls.dll: $(OBJS_TLS) libmbedx509.dll
+ 	echo "  LD    $@"
+@@ -126,9 +126,9 @@ libmbedx509.so: libmbedx509.$(SOEXT_X509)
+ 	echo "  LN    $@ -> $<"
+ 	ln -sf $< $@
+ 
+-libmbedx509.dylib: $(OBJS_X509)
++libmbedx509.dylib: $(OBJS_X509) libmbedcrypto.dylib
+ 	echo "  LD    $@"
+-	$(CC) -dynamiclib $(LOCAL_LDFLAGS) $(LDFLAGS) -o $@ $(OBJS_X509)
++	$(CC) -dynamiclib -L. -lmbedcrypto  $(LOCAL_LDFLAGS) $(LDFLAGS) -o $@ $(OBJS_X509)
+ 
+ libmbedx509.dll: $(OBJS_X509) libmbedcrypto.dll
+ 	echo "  LD    $@"
diff --git a/pkgs/development/libraries/mbedtls/default.nix b/pkgs/development/libraries/mbedtls/default.nix
index 82d867fedf04..f84e00dfadf7 100644
--- a/pkgs/development/libraries/mbedtls/default.nix
+++ b/pkgs/development/libraries/mbedtls/default.nix
@@ -12,19 +12,21 @@ stdenv.mkDerivation rec {
 
   nativeBuildInputs = [ perl ];
 
-  patchPhase = stdenv.lib.optionalString stdenv.isDarwin ''
+  patches = stdenv.lib.optionals stdenv.isDarwin [ ./darwin_dylib.patch ];
+
+  postPatch = ''
+    patchShebangs .
+  '' + stdenv.lib.optionalString stdenv.isDarwin ''
     substituteInPlace library/Makefile --replace "-soname" "-install_name"
     substituteInPlace tests/scripts/run-test-suites.pl --replace "LD_LIBRARY_PATH" "DYLD_LIBRARY_PATH"
     # Necessary for install_name_tool below
     echo "LOCAL_LDFLAGS += -headerpad_max_install_names" >> programs/Makefile
   '';
 
-  postPatch = ''
-    patchShebangs .
-  '';
-
   makeFlags = [
     "SHARED=1"
+  ] ++ stdenv.lib.optionals stdenv.isDarwin [
+    "DLEXT=dylib"
   ];
 
   installFlags = [
@@ -32,14 +34,14 @@ stdenv.mkDerivation rec {
   ];
 
   postInstall = stdenv.lib.optionalString stdenv.isDarwin ''
-      install_name_tool -change libmbedcrypto.so.0 $out/lib/libmbedcrypto.so.0 $out/lib/libmbedtls.so.10
-      install_name_tool -change libmbedcrypto.so.0 $out/lib/libmbedcrypto.so.0 $out/lib/libmbedx509.so.0
-      install_name_tool -change libmbedx509.so.0 $out/lib/libmbedx509.so.0 $out/lib/libmbedtls.so.10
+      install_name_tool -change libmbedcrypto.dylib $out/lib/libmbedcrypto.dylib $out/lib/libmbedtls.dylib
+      install_name_tool -change libmbedcrypto.dylib $out/lib/libmbedcrypto.dylib $out/lib/libmbedx509.dylib
+      install_name_tool -change libmbedx509.dylib $out/lib/libmbedx509.dylib $out/lib/libmbedtls.dylib
 
       for exe in $out/bin/*; do
-          install_name_tool -change libmbedtls.so.10 $out/lib/libmbedtls.so.10 $exe
-          install_name_tool -change libmbedx509.so.0 $out/lib/libmbedx509.so.0 $exe
-          install_name_tool -change libmbedcrypto.so.0 $out/lib/libmbedcrypto.so.0 $exe
+          install_name_tool -change libmbedtls.dylib $out/lib/libmbedtls.dylib $exe
+          install_name_tool -change libmbedx509.dylib $out/lib/libmbedx509.dylib $exe
+          install_name_tool -change libmbedcrypto.dylib $out/lib/libmbedcrypto.dylib $exe
       done
   '';
 
diff --git a/pkgs/development/libraries/mediastreamer/default.nix b/pkgs/development/libraries/mediastreamer/default.nix
index 06cc53abb564..90f154367643 100644
--- a/pkgs/development/libraries/mediastreamer/default.nix
+++ b/pkgs/development/libraries/mediastreamer/default.nix
@@ -1,22 +1,29 @@
 { stdenv, fetchurl, pkgconfig, intltool, alsaLib, libpulseaudio, speex, gsm
 , libopus, ffmpeg, libX11, libXv, mesa, glew, libtheora, libvpx, SDL, libupnp
 , ortp, libv4l, libpcap, srtp, fetchFromGitHub, cmake, bctoolbox, doxygen
-, python, libXext, libmatroska, openssl
+, python, libXext, libmatroska, openssl, fetchpatch
 }:
 
 stdenv.mkDerivation rec {
   baseName = "mediastreamer2";
-  version = "2.14.0";
+  version = "2.16.1";
   name = "${baseName}-${version}";
 
   src = fetchFromGitHub {
     owner = "BelledonneCommunications";
     repo = "${baseName}";
     rev = "${version}";
-    sha256 = "1b59rzsaw54mhy4pz9hndmim4rgidkn7s6c4iyl34mz58lwxpmqp";
+    sha256 = "02745bzl2r1jqvdqzyv94fjd4w92zr976la4c4nfvsy52waqah7j";
   };
 
-  patches = [ ./plugins_dir.patch ];
+  patches = [
+    (fetchpatch {
+      name = "allow-build-without-git.patch";
+      url = "https://github.com/BelledonneCommunications/mediastreamer2/commit/de3a24b795d7a78e78eab6b974e7ec5abf2259ac.patch";
+      sha256 = "1zqkrab42n4dha0knfsyj4q0wc229ma125gk9grj67ps7r7ipscy";
+    })
+    ./plugins_dir.patch
+  ];
 
   nativeBuildInputs = [ pkgconfig intltool cmake doxygen python ];
 
diff --git a/pkgs/development/libraries/mesa/default.nix b/pkgs/development/libraries/mesa/default.nix
index 8df248e3e461..fa3336c4cea0 100644
--- a/pkgs/development/libraries/mesa/default.nix
+++ b/pkgs/development/libraries/mesa/default.nix
@@ -92,7 +92,7 @@ stdenv.mkDerivation {
   patches = [
     ./glx_ro_text_segm.patch # fix for grsecurity/PaX
     ./symlink-drivers.patch
-  ];
+  ] ++ stdenv.lib.optional stdenv.hostPlatform.isMusl ./musl-fixes.patch;
 
   outputs = [ "out" "dev" "drivers" "osmesa" ];
 
diff --git a/pkgs/development/libraries/mesa/musl-fixes.patch b/pkgs/development/libraries/mesa/musl-fixes.patch
new file mode 100644
index 000000000000..60140d445ae8
--- /dev/null
+++ b/pkgs/development/libraries/mesa/musl-fixes.patch
@@ -0,0 +1,22 @@
+--- ./src/gallium/winsys/svga/drm/vmw_screen.h.orig
++++ ./src/gallium/winsys/svga/drm/vmw_screen.h
+@@ -34,7 +34,7 @@
+ #ifndef VMW_SCREEN_H_
+ #define VMW_SCREEN_H_
+ 
+-
++#include <sys/stat.h>
+ #include "pipe/p_compiler.h"
+ #include "pipe/p_state.h"
+ 
+--- a/src/util/u_endian.h.orig	2016-11-04 12:16:00.480356454 +0100
++++ b/src/util/u_endian.h	2016-11-04 12:16:11.984347944 +0100
+@@ -27,7 +27,7 @@
+ #ifndef U_ENDIAN_H
+ #define U_ENDIAN_H
+ 
+-#if defined(__GLIBC__) || defined(ANDROID) || defined(__CYGWIN__)
++#if defined(__linux__) || defined(ANDROID) || defined(__CYGWIN__)
+ #include <endian.h>
+ 
+ #if __BYTE_ORDER == __LITTLE_ENDIAN
diff --git a/pkgs/development/libraries/mimetic/default.nix b/pkgs/development/libraries/mimetic/default.nix
index fc48c85f23c7..7a06f9277c95 100644
--- a/pkgs/development/libraries/mimetic/default.nix
+++ b/pkgs/development/libraries/mimetic/default.nix
@@ -14,7 +14,7 @@ stdenv.mkDerivation rec {
 
   meta = with stdenv.lib; {
     description = "MIME handling library";
-    homepage    = http://codesink.org/mimetic_mime_library.html;
+    homepage    = http://www.codesink.org/mimetic_mime_library.html;
     license     = licenses.mit;
     maintainers = with maintainers; [ leenaars];
     platforms = platforms.linux;
diff --git a/pkgs/development/libraries/mp4v2/default.nix b/pkgs/development/libraries/mp4v2/default.nix
index 736c31b442a5..a5542ebb659a 100644
--- a/pkgs/development/libraries/mp4v2/default.nix
+++ b/pkgs/development/libraries/mp4v2/default.nix
@@ -8,11 +8,19 @@ stdenv.mkDerivation rec {
     sha256 = "0f438bimimsvxjbdp4vsr8hjw2nwggmhaxgcw07g2z361fkbj683";
   };
 
-  # From Handbrake
-  # mp4v2 doesn't seem to be actively maintained any more :-/
   patches = [
+    # From Handbrake
+    # mp4v2 doesn't seem to be actively maintained any more :-/
     ./A02-meaningful-4gb-warning.patch
+
+    (fetchurl {
+      name = "gcc-7.patch";
+      url = "https://src.fedoraproject.org/cgit/rpms/libmp4v2.git/plain/"
+          + "0004-Fix-GCC7-build.patch?id=d7aeedabb";
+      sha256 = "0sbn0il7lmk77yrjyb4f0a3z3h8gsmdkscvz5n9hmrrrhrwf672w";
+    })
   ];
+
   # `faac' expects `mp4.h'.
   postInstall = "ln -s mp4v2/mp4v2.h $out/include/mp4.h";
 
diff --git a/pkgs/development/libraries/mpfr/default.nix b/pkgs/development/libraries/mpfr/default.nix
index fe364f22f9a3..4aac5a927092 100644
--- a/pkgs/development/libraries/mpfr/default.nix
+++ b/pkgs/development/libraries/mpfr/default.nix
@@ -1,17 +1,15 @@
 { stdenv, fetchurl, gmp
-, buildPlatform, hostPlatform
+, hostPlatform
 }:
 
 stdenv.mkDerivation rec {
-  name = "mpfr-3.1.3";
+  name = "mpfr-3.1.6";
 
   src = fetchurl {
-    url = "mirror://gnu/mpfr/${name}.tar.bz2";
-    sha256 = "1z8akfw9wbmq91vrx04bw86mmnxw2sw5qm5cr8ix5b3w2mcv8fzn";
+    url = "mirror://gnu/mpfr/${name}.tar.xz";
+    sha256 = "0l598h9klpgkz2bp0rxiqb90mkqh9f2f81n5rpy191j00hdaqqks";
   };
 
-  patches = [ ./upstream.patch ];
-
   outputs = [ "out" "dev" "doc" "info" ];
 
   # mpfr.h requires gmp.h
diff --git a/pkgs/development/libraries/ncurses/default.nix b/pkgs/development/libraries/ncurses/default.nix
index 0dd7b37e1a66..d63536e75f06 100644
--- a/pkgs/development/libraries/ncurses/default.nix
+++ b/pkgs/development/libraries/ncurses/default.nix
@@ -11,23 +11,21 @@
 }:
 
 stdenv.mkDerivation rec {
-  version = if abiVersion == "5" then "5.9" else "6.0-20171125";
-  name = "ncurses-${version}";
+  version = "6.0-20171125";
+  name = "ncurses-${version}" + lib.optionalString (abiVersion == "5") "-abi5-compat";
 
-  src = fetchurl (if abiVersion == "5" then {
-    url = "mirror://gnu/ncurses/${name}.tar.gz";
-    sha256 = "0fsn7xis81za62afan0vvm38bvgzg5wfmv1m86flqcj0nj7jjilh";
-  } else {
+  src = fetchurl {
     urls = [
-      "ftp://ftp.invisible-island.net/ncurses/current/${name}.tgz"
-      "https://invisible-mirror.net/archives/ncurses/current/${name}.tgz"
+      # Remove this mirror on next upgrade, it's only needed because upstream took ncurses-6.0-20171125.tgz down!
+      "http://bld1.alpinelinux.org/distfiles/v3.5/ncurses-${version}.tgz"
+
+      "ftp://ftp.invisible-island.net/ncurses/current/ncurses-${version}.tgz"
+      "https://invisible-mirror.net/archives/ncurses/current/ncurses-${version}.tgz"
     ];
     sha256 = "11adzj0k82nlgpfrflabvqn2m7fmhp2y6pd7ivmapynxqb9vvb92";
-  });
+  };
 
-  # Unnecessarily complicated in order to avoid mass-rebuilds
-  patches = lib.optional (!stdenv.cc.isClang || abiVersion == "5") ./clang.patch
-    ++ lib.optional (stdenv.cc.isGNU && abiVersion == "5") ./gcc-5.patch;
+  patches = lib.optional (!stdenv.cc.isClang) ./clang.patch;
 
   outputs = [ "out" "dev" "man" ];
   setOutputFlags = false; # some aren't supported
@@ -37,7 +35,8 @@ stdenv.mkDerivation rec {
     "--without-debug"
     "--enable-pc-files"
     "--enable-symlinks"
-  ] ++ lib.optional unicode "--enable-widec";
+  ] ++ lib.optional unicode "--enable-widec"
+    ++ lib.optional (abiVersion == "5") "--with-abi-version=5";
 
   # Only the C compiler, and explicitly not C++ compiler needs this flag on solaris:
   CFLAGS = lib.optionalString stdenv.isSunOS "-D_XOPEN_SOURCE_EXTENDED";
diff --git a/pkgs/development/libraries/ncurses/gcc-5.patch b/pkgs/development/libraries/ncurses/gcc-5.patch
deleted file mode 100644
index 2448229b88e1..000000000000
--- a/pkgs/development/libraries/ncurses/gcc-5.patch
+++ /dev/null
@@ -1,46 +0,0 @@
-https://bugs.gentoo.org/545114
-
-extracted from the upstream change (which had many unrelated commits in one)
-
-From 97bb4678dc03e753290b39bbff30ba2825df9517 Mon Sep 17 00:00:00 2001
-From: "Thomas E. Dickey" <dickey@invisible-island.net>
-Date: Sun, 7 Dec 2014 03:10:09 +0000
-Subject: [PATCH] ncurses 5.9 - patch 20141206
-
-+ modify MKlib_gen.sh to work around change in development version of
-  gcc introduced here:
-	  https://gcc.gnu.org/ml/gcc-patches/2014-06/msg02185.html
-	  https://gcc.gnu.org/ml/gcc-patches/2014-07/msg00236.html
-  (reports by Marcus Shawcroft, Maohui Lei).
-
-diff --git a/ncurses/base/MKlib_gen.sh b/ncurses/base/MKlib_gen.sh
-index d8cc3c9..b91398c 100755
---- a/ncurses/base/MKlib_gen.sh
-+++ b/ncurses/base/MKlib_gen.sh
-@@ -474,11 +474,22 @@ sed -n -f $ED1 \
- 	-e 's/gen_$//' \
- 	-e 's/  / /g' >>$TMP
- 
-+cat >$ED1 <<EOF
-+s/  / /g
-+s/^ //
-+s/ $//
-+s/P_NCURSES_BOOL/NCURSES_BOOL/g
-+EOF
-+
-+# A patch discussed here:
-+#	https://gcc.gnu.org/ml/gcc-patches/2014-06/msg02185.html
-+# introduces spurious #line markers.  Work around that by ignoring the system's
-+# attempt to define "bool" and using our own symbol here.
-+sed -e 's/bool/P_NCURSES_BOOL/g' $TMP > $ED2
-+cat $ED2 >$TMP
-+
- $preprocessor $TMP 2>/dev/null \
--| sed \
--	-e 's/  / /g' \
--	-e 's/^ //' \
--	-e 's/_Bool/NCURSES_BOOL/g' \
-+| sed -f $ED1 \
- | $AWK -f $AW2 \
- | sed -f $ED3 \
- | sed \
diff --git a/pkgs/development/libraries/nettle/generic.nix b/pkgs/development/libraries/nettle/generic.nix
index 9633dacd68f2..3af93469cf16 100644
--- a/pkgs/development/libraries/nettle/generic.nix
+++ b/pkgs/development/libraries/nettle/generic.nix
@@ -1,4 +1,4 @@
-{ stdenv, gmp, gnum4
+{ stdenv, buildPackages, gmp, gnum4
 
 # Version specific args
 , version, src
@@ -12,7 +12,8 @@ stdenv.mkDerivation (rec {
   outputs = [ "out" "dev" ];
   outputBin = "dev";
 
-  buildInputs = [ gnum4 ];
+  depsBuildBuild = [ buildPackages.stdenv.cc ];
+  nativeBuildInputs = [ gnum4 ];
   propagatedBuildInputs = [ gmp ];
 
   doCheck = (stdenv.system != "i686-cygwin" && !stdenv.isDarwin);
diff --git a/pkgs/development/libraries/nix-plugins/default.nix b/pkgs/development/libraries/nix-plugins/default.nix
index 2dcc7e9a53dd..8ccaf726e6b0 100644
--- a/pkgs/development/libraries/nix-plugins/default.nix
+++ b/pkgs/development/libraries/nix-plugins/default.nix
@@ -1,5 +1,5 @@
-{ stdenv, fetchFromGitHub, nix, boehmgc }:
-let version = "2.0.7"; in
+{ stdenv, fetchFromGitHub, nix, cmake, pkgconfig }:
+let version = "3.0.1"; in
 stdenv.mkDerivation {
   name = "nix-plugins-${version}";
 
@@ -7,12 +7,12 @@ stdenv.mkDerivation {
     owner = "shlevy";
     repo = "nix-plugins";
     rev = version;
-    sha256 = "1q4ydp2w114wbfm41m4qgrabha7ifa17xyz5dr137vvnj6njp4vs";
+    sha256 = "1pmk2m0kc6a3jqygm5cy1fl5gbcy0ghc2xs4ww0gh20walrys82r";
   };
 
-  buildFlags = [ "NIX_INCLUDE=${nix.dev}/include" "GC_INCLUDE=${boehmgc.dev}/include" ];
+  nativeBuildInputs = [ cmake pkgconfig ];
 
-  installFlags = [ "PREFIX=$(out)" ];
+  buildInputs = [ nix ];
 
   meta = {
     description = "Collection of miscellaneous plugins for the nix expression language";
diff --git a/pkgs/development/libraries/npth/default.nix b/pkgs/development/libraries/npth/default.nix
index dc4f4926e9d5..a600938cdbb2 100644
--- a/pkgs/development/libraries/npth/default.nix
+++ b/pkgs/development/libraries/npth/default.nix
@@ -8,6 +8,8 @@ stdenv.mkDerivation rec {
     sha256 = "1hmkkp6vzyrh8v01c2ynzf9vwikyagp7p1lxhbnr4ysk3w66jji9";
   };
 
+  doCheck = true;
+
   meta = with stdenv.lib; {
     description = "The New GNU Portable Threads Library";
     longDescription = ''
diff --git a/pkgs/development/libraries/nspr/default.nix b/pkgs/development/libraries/nspr/default.nix
index 2930de508e99..ccb04024f643 100644
--- a/pkgs/development/libraries/nspr/default.nix
+++ b/pkgs/development/libraries/nspr/default.nix
@@ -16,6 +16,9 @@ stdenv.mkDerivation {
 
   preConfigure = ''
     cd nspr
+  '' + stdenv.lib.optionalString stdenv.isDarwin ''
+    substituteInPlace configure --replace '@executable_path/' "$out/lib/"
+    substituteInPlace configure.in --replace '@executable_path/' "$out/lib/"
   '';
 
   configureFlags = [
diff --git a/pkgs/development/libraries/nss/default.nix b/pkgs/development/libraries/nss/default.nix
index 8d799e2c13a0..a8f36af5df58 100644
--- a/pkgs/development/libraries/nss/default.nix
+++ b/pkgs/development/libraries/nss/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, nspr, perl, zlib, sqlite }:
+{ stdenv, fetchurl, nspr, perl, zlib, sqlite, fixDarwinDylibNames }:
 
 let
 
@@ -16,7 +16,8 @@ in stdenv.mkDerivation rec {
     sha256 = "186x33wsk4mzjz7dzbn8p0py9a0nzkgzpfkdv4rlyy5gghv5vhd3";
   };
 
-  buildInputs = [ perl zlib sqlite ];
+  buildInputs = [ perl zlib sqlite ]
+    ++ stdenv.lib.optional stdenv.isDarwin fixDarwinDylibNames;
 
   propagatedBuildInputs = [ nspr ];
 
@@ -33,6 +34,10 @@ in stdenv.mkDerivation rec {
 
   patchFlags = "-p0";
 
+  postPatch = stdenv.lib.optionalString stdenv.isDarwin ''
+    substituteInPlace nss/coreconf/Darwin.mk --replace '@executable_path/$(notdir $@)' "$out/lib/\$(notdir \$@)"
+  '';
+
   outputs = [ "out" "dev" "tools" ];
 
   preConfigure = "cd nss";
diff --git a/pkgs/development/libraries/ocl-icd/default.nix b/pkgs/development/libraries/ocl-icd/default.nix
index 6c3a77cfaf5e..75dda07494d9 100644
--- a/pkgs/development/libraries/ocl-icd/default.nix
+++ b/pkgs/development/libraries/ocl-icd/default.nix
@@ -9,14 +9,16 @@ stdenv.mkDerivation rec {
     sha256 = "0f14gpa13sdm0kzqv5yycp4pschbmi6n5fj7wl4ilspzsrqcgqr2";
   };
 
-  buildInputs = [ ruby opencl-headers ];
+  nativeBuildInputs = [ ruby ];
+
+  buildInputs = [ opencl-headers ];
 
   postPatch = ''
     sed -i 's,"/etc/OpenCL/vendors","${mesa_noglu.driverLink}/etc/OpenCL/vendors",g' ocl_icd_loader.c
   '';
 
   meta = with stdenv.lib; {
-    description = "OpenCL ICD Loader";
+    description = "OpenCL ICD Loader for ${opencl-headers.name}";
     homepage    = https://forge.imag.fr/projects/ocl-icd/;
     license     = licenses.bsd2;
     platforms = platforms.linux;
diff --git a/pkgs/development/libraries/opencl-headers/default.nix b/pkgs/development/libraries/opencl-headers/default.nix
index 717bb5ad0eed..9ce8bb618bf9 100644
--- a/pkgs/development/libraries/opencl-headers/default.nix
+++ b/pkgs/development/libraries/opencl-headers/default.nix
@@ -1,22 +1,24 @@
-{ stdenv, fetchFromGitHub }:
+{ stdenv, fetchFromGitHub
+, version # "12" for "1.2", "22" for "2.2" and so on
+}:
 
 stdenv.mkDerivation rec {
-  name = "opencl-headers-2.1-2016-11-29";
+  name = "opencl-headers-${version}-2017-07-18";
 
   src = fetchFromGitHub {
     owner = "KhronosGroup";
     repo = "OpenCL-Headers";
-    rev = "abb29588550c77f8340a6c3683531407013bf26b";
-    sha256 = "0zjznq65i4b2h4k36qfbbzq1acf2jdd9vygjv5az1yk7qgsp4jj7";
+    rev = "f039db6764d52388658ef15c30b2237bbda49803";
+    sha256 = "0z04i330zr8czak2624q71aajdcq7ly8mb5bgala5m235qjpsrh7";
   };
 
   installPhase = ''
     mkdir -p $out/include/CL
-    cp * $out/include/CL
+    cp opencl${version}/CL/* $out/include/CL
   '';
 
   meta = with stdenv.lib; {
-    description = "Khronos OpenCL headers";
+    description = "Khronos OpenCL headers version ${version}";
     homepage = https://www.khronos.org/registry/cl/;
     license = licenses.mit;
     platforms = platforms.unix;
diff --git a/pkgs/development/libraries/openmpi/default.nix b/pkgs/development/libraries/openmpi/default.nix
index c2f79753bd19..9aca076c5dcb 100644
--- a/pkgs/development/libraries/openmpi/default.nix
+++ b/pkgs/development/libraries/openmpi/default.nix
@@ -1,4 +1,4 @@
-{stdenv, fetchurl, gfortran, perl, rdma-core
+{ stdenv, fetchurl, gfortran, perl, libnl, rdma-core, zlib
 
 # Enable the Sun Grid Engine bindings
 , enableSGE ? false
@@ -7,44 +7,48 @@
 , enablePrefix ? false
 }:
 
-with stdenv.lib;
-
 let
-  majorVersion = "1.10";
+  majorVersion = "3.0";
+  minorVersion = "0";
 
 in stdenv.mkDerivation rec {
-  name = "openmpi-${majorVersion}.7";
+  name = "openmpi-${majorVersion}.${minorVersion}";
 
   src = fetchurl {
     url = "http://www.open-mpi.org/software/ompi/v${majorVersion}/downloads/${name}.tar.bz2";
-    sha256 = "142s1vny9gllkq336yafxayjgcirj2jv0ddabj879jgya7hyr2d0";
+    sha256 = "1mw2d94k6mp4scg1wnkj50vdh734fy5m2ygyrj65s4mh3prbz6gn";
   };
 
-  buildInputs = [ gfortran ]
-    ++ optional (stdenv.isLinux || stdenv.isFreeBSD) rdma-core;
+  postPatch = ''
+    patchShebangs ./
+  '';
+
+  buildInputs = with stdenv; [ gfortran zlib ]
+    ++ lib.optional isLinux libnl
+    ++ lib.optional (isLinux || isFreeBSD) rdma-core;
 
   nativeBuildInputs = [ perl ];
 
-  configureFlags = []
-    ++ optional enableSGE "--with-sge"
-    ++ optional enablePrefix "--enable-mpirun-prefix-by-default"
+  configureFlags = with stdenv; [ "--disable-mca-dso" ]
+    ++ lib.optional isLinux  "--with-libnl=${libnl.dev}"
+    ++ lib.optional enableSGE "--with-sge"
+    ++ lib.optional enablePrefix "--enable-mpirun-prefix-by-default"
     ;
 
   enableParallelBuilding = true;
 
-  preBuild = ''
-    patchShebangs ompi/mpi/fortran/base/gen-mpi-sizeof.pl
-  '';
-
   postInstall = ''
-		rm -f $out/lib/*.la
+    rm -f $out/lib/*.la
    '';
 
-  meta = {
+  doCheck = true;
+
+  meta = with stdenv.lib; {
     homepage = http://www.open-mpi.org/;
-    description = "Open source MPI-2 implementation";
-    longDescription = "The Open MPI Project is an open source MPI-2 implementation that is developed and maintained by a consortium of academic, research, and industry partners. Open MPI is therefore able to combine the expertise, technologies, and resources from all across the High Performance Computing community in order to build the best MPI library available. Open MPI offers advantages for system and software vendors, application developers and computer science researchers.";
-    maintainers = [ ];
+    description = "Open source MPI-3 implementation";
+    longDescription = "The Open MPI Project is an open source MPI-3 implementation that is developed and maintained by a consortium of academic, research, and industry partners. Open MPI is therefore able to combine the expertise, technologies, and resources from all across the High Performance Computing community in order to build the best MPI library available. Open MPI offers advantages for system and software vendors, application developers and computer science researchers.";
+    maintainers = with maintainers; [ markuskowa ];
+    license = licenses.bsd3;
     platforms = platforms.unix;
   };
 }
diff --git a/pkgs/development/libraries/openssl/default.nix b/pkgs/development/libraries/openssl/default.nix
index 775e6056dffc..af6a540b97c0 100644
--- a/pkgs/development/libraries/openssl/default.nix
+++ b/pkgs/development/libraries/openssl/default.nix
@@ -24,6 +24,12 @@ let
       ++ optional (versionOlder version "1.0.2" && hostPlatform.isDarwin)
            ./darwin-arch.patch;
 
+  postPatch = if (versionAtLeast version "1.1.0" && stdenv.hostPlatform.isMusl) then ''
+    substituteInPlace crypto/async/arch/async_posix.h \
+      --replace '!defined(__ANDROID__) && !defined(__OpenBSD__)' \
+                '!defined(__ANDROID__) && !defined(__OpenBSD__) && 0'
+  '' else null;
+
     outputs = [ "bin" "dev" "out" "man" ];
     setOutputFlags = false;
     separateDebugInfo = hostPlatform.isLinux;
@@ -49,6 +55,10 @@ let
     # TODO(@Ericson2314): Make unconditional on mass rebuild
     ${if buildPlatform != hostPlatform then "configurePlatforms" else null} = [];
 
+    preConfigure = ''
+      patchShebangs Configure
+    '';
+
     configureFlags = [
       "shared"
       "--libdir=lib"
diff --git a/pkgs/development/libraries/ortp/default.nix b/pkgs/development/libraries/ortp/default.nix
index f05811f34813..5dc5df8e95b9 100644
--- a/pkgs/development/libraries/ortp/default.nix
+++ b/pkgs/development/libraries/ortp/default.nix
@@ -2,14 +2,14 @@
 
 stdenv.mkDerivation rec {
   baseName = "ortp";
-  version = "0.27.0";
+  version = "1.0.2";
   name = "${baseName}-${version}";
 
   src = fetchFromGitHub {
     owner = "BelledonneCommunications";
     repo = "${baseName}";
     rev = "${version}";
-    sha256 = "0gjaaph4pamay9gn1yn7ky5wyzhj93r53rwak7h8s48vf08fqyv7";
+    sha256 = "12cwv593bsdnxs0zfcp07vwyk7ghlz2wv7vdbs1ksv293w3vj2rv";
   };
 
   buildInputs = [ bctoolbox ];
diff --git a/pkgs/development/libraries/pcre/default.nix b/pkgs/development/libraries/pcre/default.nix
index b34c9ff31f2c..2ea5e923bad0 100644
--- a/pkgs/development/libraries/pcre/default.nix
+++ b/pkgs/development/libraries/pcre/default.nix
@@ -24,8 +24,7 @@ in stdenv.mkDerivation rec {
 
   outputs = [ "bin" "dev" "out" "doc" "man" ];
 
-  configureFlags = [
-    "--enable-jit"
+  configureFlags = optional (!hostPlatform.isRiscV) "--enable-jit" ++ [
     "--enable-unicode-properties"
     "--disable-cpp"
   ]
diff --git a/pkgs/development/libraries/pipewire/default.nix b/pkgs/development/libraries/pipewire/default.nix
new file mode 100644
index 000000000000..3bd94c977e84
--- /dev/null
+++ b/pkgs/development/libraries/pipewire/default.nix
@@ -0,0 +1,47 @@
+{ stdenv, fetchFromGitHub, meson, ninja, pkgconfig, doxygen, graphviz, valgrind
+, glib, dbus, gst_all_1, v4l_utils, alsaLib, ffmpeg, libjack2, libudev, libva, xlibs
+, sbc, SDL2
+}:
+
+let
+  version = "0.1.8";
+in stdenv.mkDerivation rec {
+  name = "pipewire-${version}";
+
+  src = fetchFromGitHub {
+    owner = "PipeWire";
+    repo = "pipewire";
+    rev = version;
+    sha256 = "1nim8d1lsf6yxk97piwmsz686w84b09lk6cagbyjr9m3k2hwybqn";
+  };
+
+  outputs = [ "out" "dev" "doc" ];
+
+  nativeBuildInputs = [
+    meson ninja pkgconfig doxygen graphviz valgrind
+  ];
+  buildInputs = [
+    glib dbus gst_all_1.gst-plugins-base gst_all_1.gstreamer v4l_utils
+    alsaLib ffmpeg libjack2 libudev libva xlibs.libX11 sbc SDL2
+  ];
+
+  patches = [
+    ./fix-paths.patch
+  ];
+
+  mesonFlags = [
+    "-Denable_docs=true"
+    "-Denable_gstreamer=true"
+  ];
+
+  doCheck = true;
+  checkPhase = "meson test";
+
+  meta = with stdenv.lib; {
+    description = "Server and user space API to deal with multimedia pipelines";
+    homepage = http://pipewire.org/;
+    license = licenses.lgpl21;
+    platforms = platforms.linux;
+    maintainers = with maintainers; [ jtojnar ];
+  };
+}
diff --git a/pkgs/development/libraries/pipewire/fix-paths.patch b/pkgs/development/libraries/pipewire/fix-paths.patch
new file mode 100644
index 000000000000..5a07c6271e14
--- /dev/null
+++ b/pkgs/development/libraries/pipewire/fix-paths.patch
@@ -0,0 +1,8 @@
+--- a/src/daemon/systemd/user/meson.build
++++ b/src/daemon/systemd/user/meson.build
+@@ -1,4 +1,4 @@
+-systemd_user_services_dir = systemd.get_pkgconfig_variable('systemduserunitdir')
++systemd_user_services_dir = join_paths(get_option('prefix'), 'etc', 'systemd', 'user')
+ 
+ install_data(sources : 'pipewire.socket', install_dir : systemd_user_services_dir)
+ 
diff --git a/pkgs/development/libraries/pixman/default.nix b/pkgs/development/libraries/pixman/default.nix
index dc378711d36b..6b891bdb38c2 100644
--- a/pkgs/development/libraries/pixman/default.nix
+++ b/pkgs/development/libraries/pixman/default.nix
@@ -1,16 +1,25 @@
-{ fetchurl, stdenv, pkgconfig, libpng, glib /*just passthru*/ }:
+{ stdenv, fetchurl, fetchpatch, autoconf, automake, libtool, pkgconfig, libpng, glib /*just passthru*/ }:
 
 stdenv.mkDerivation rec {
-  name = "pixman-0.34.0";
+  name = "pixman-${version}";
+  version = "0.34.0";
 
   src = fetchurl {
     url = "mirror://xorg/individual/lib/${name}.tar.bz2";
     sha256 = "184lazwdpv67zrlxxswpxrdap85wminh1gmq1i5lcz6iycw39fir";
   };
 
-  patches = [];
+  patches = stdenv.lib.optionals stdenv.cc.isClang [
+    (fetchpatch {
+      name = "builtin-shuffle.patch";
+      url = https://patchwork.freedesktop.org/patch/177506/raw;
+      sha256 = "0rvraq93769dy2im2m022rz99fcdxprgc2fbmasnddcwrqy1x3xr";
+    })
+  ];
+
+  nativeBuildInputs = [ pkgconfig ]
+    ++ stdenv.lib.optionals stdenv.cc.isClang [ autoconf automake libtool ];
 
-  nativeBuildInputs = [ pkgconfig ];
   buildInputs = stdenv.lib.optional doCheck libpng;
 
   configureFlags = stdenv.lib.optional stdenv.isArm "--disable-arm-iwmmxt";
diff --git a/pkgs/development/libraries/polkit/default.nix b/pkgs/development/libraries/polkit/default.nix
index aef627f8f1fe..6bf9bcb954c1 100644
--- a/pkgs/development/libraries/polkit/default.nix
+++ b/pkgs/development/libraries/polkit/default.nix
@@ -26,18 +26,26 @@ stdenv.mkDerivation rec {
 
   patches = [
     (fetchpatch {
-      url = "http://pkgs.fedoraproject.org/cgit/rpms/polkit.git/plain/polkit-0.113-agent-leaks.patch?id=fa6fd575804de92886c95d3bc2b7eb2abcd13760";
+      url = "http://src.fedoraproject.org/cgit/rpms/polkit.git/plain/polkit-0.113-agent-leaks.patch?id=fa6fd575804de92886c95d3bc2b7eb2abcd13760";
       sha256 = "1cxnhj0y30g7ldqq1y6zwsbdwcx7h97d3mpd3h5jy7dhg3h9ym91";
     })
     (fetchpatch {
-      url = "http://pkgs.fedoraproject.org/cgit/rpms/polkit.git/plain/polkit-0.113-polkitpermission-leak.patch?id=fa6fd575804de92886c95d3bc2b7eb2abcd13760";
+      url = "http://src.fedoraproject.org/cgit/rpms/polkit.git/plain/polkit-0.113-polkitpermission-leak.patch?id=fa6fd575804de92886c95d3bc2b7eb2abcd13760";
       sha256 = "1h1rkd4avqyyr8q6836zzr3w10jf521gcqnvhrhzwdpgp1ay4si7";
     })
     (fetchpatch {
-      url = "http://pkgs.fedoraproject.org/cgit/rpms/polkit.git/plain/polkit-0.113-itstool.patch?id=fa6fd575804de92886c95d3bc2b7eb2abcd13760";
+      url = "http://src.fedoraproject.org/cgit/rpms/polkit.git/plain/polkit-0.113-itstool.patch?id=fa6fd575804de92886c95d3bc2b7eb2abcd13760";
       sha256 = "0bxmjwp8ahy1y5g1l0kxmld0l3mlvb2l0i5n1qabia3d5iyjkyfh";
     })
-  ];
+  ]
+  # Could be applied uncondtionally but don't want to trigger rebuild
+  # https://bugs.freedesktop.org/show_bug.cgi?id=50145
+  ++ stdenv.lib.optional stdenv.hostPlatform.isMusl (fetchpatch {
+    name = "netgroup-optional.patch";
+    url = "https://bugs.freedesktop.org/attachment.cgi?id=118753";
+    sha256 = "1zq51dhmqi9zi86bj9dq4i4pxlxm41k3k4a091j07bd78cjba038";
+  });
+
 
   outputs = [ "bin" "dev" "out" ]; # small man pages in $bin
 
diff --git a/pkgs/development/libraries/ppl/default.nix b/pkgs/development/libraries/ppl/default.nix
index 73eda630e449..566d88dcdb56 100644
--- a/pkgs/development/libraries/ppl/default.nix
+++ b/pkgs/development/libraries/ppl/default.nix
@@ -1,4 +1,4 @@
-{ fetchurl, stdenv, gmpxx, perl, gnum4 }:
+{ fetchurl, fetchpatch, stdenv, gmpxx, perl, gnum4 }:
 
 let version = "1.2"; in
 
@@ -10,6 +10,12 @@ stdenv.mkDerivation rec {
     sha256 = "1wgxcbgmijgk11df43aiqfzv31r3bkxmgb4yl68g21194q60nird";
   };
 
+  patches = [(fetchpatch {
+    name = "ppl.patch";
+    url = "http://www.cs.unipr.it/git/gitweb.cgi?p=ppl/ppl.git;a=patch;h=c39f6a07b51f89e365b05ba4147aa2aa448febd7";
+    sha256 = "1zj90hm25pkgvk4jlkfzh18ak9b98217gbidl3731fdccbw6hr87";
+  })];
+
   nativeBuildInputs = [ perl gnum4 ];
   propagatedBuildInputs = [ gmpxx ];
 
diff --git a/pkgs/development/libraries/psol/default.nix b/pkgs/development/libraries/psol/default.nix
index dd6037e68329..270c24dc01f4 100644
--- a/pkgs/development/libraries/psol/default.nix
+++ b/pkgs/development/libraries/psol/default.nix
@@ -1,5 +1,5 @@
 { callPackage }:
 callPackage ./generic.nix {} {
-  version = "1.13.35.1"; # Latest beta, 2017-11-08
-  sha256  = "126823gpr3rdqakwixmr887rbvwhksr3xg14jnyzlp84q4hg1p0n";
+  version = "1.13.35.2"; # Latest stable, 2018-02-05
+  sha256  = "0xi2srf9gx0x2sz9r45zb35k2n0iv457if1lqzvbanls3f935cmr";
 }
diff --git a/pkgs/development/libraries/qpdf/default.nix b/pkgs/development/libraries/qpdf/default.nix
index e2c80e445e76..42c4b028aa83 100644
--- a/pkgs/development/libraries/qpdf/default.nix
+++ b/pkgs/development/libraries/qpdf/default.nix
@@ -1,13 +1,13 @@
 { stdenv, fetchurl, libjpeg, zlib, perl }:
 
-let version = "7.0.0";
+let version = "7.1.1";
 in
 stdenv.mkDerivation rec {
   name = "qpdf-${version}";
 
   src = fetchurl {
     url = "mirror://sourceforge/qpdf/qpdf/${version}/${name}.tar.gz";
-    sha256 = "0py6p27fx4qrwq9mvcybna42b0bdi359x38lzmggxl5a9khqvl7y";
+    sha256 = "1ypjxm74dhn9c4mj027zzkh0z4kpw9xiqwh3pjmmghm502hby3ca";
   };
 
   nativeBuildInputs = [ perl ];
diff --git a/pkgs/development/libraries/qt-4.x/4.8/clang-5-darwin.patch b/pkgs/development/libraries/qt-4.x/4.8/clang-5-darwin.patch
new file mode 100644
index 000000000000..7b181f3ad896
--- /dev/null
+++ b/pkgs/development/libraries/qt-4.x/4.8/clang-5-darwin.patch
@@ -0,0 +1,13 @@
+diff --git a/src/gui/text/qfontengine_coretext.mm b/src/gui/text/qfontengine_coretext.mm
+index 204d685..e05179e 100644
+--- a/src/gui/text/qfontengine_coretext.mm
++++ b/src/gui/text/qfontengine_coretext.mm
+@@ -886,7 +886,7 @@ void QCoreTextFontEngine::getUnscaledGlyph(glyph_t glyph, QPainterPath *path, gl
+ 
+ QFixed QCoreTextFontEngine::emSquareSize() const
+ {
+-    return QFixed::QFixed(int(CTFontGetUnitsPerEm(ctfont)));
++    return QFixed(int(CTFontGetUnitsPerEm(ctfont)));
+ }
+ 
+ QFontEngine *QCoreTextFontEngine::cloneWithSize(qreal pixelSize) const
diff --git a/pkgs/development/libraries/qt-4.x/4.8/default.nix b/pkgs/development/libraries/qt-4.x/4.8/default.nix
index 488306fc1ce2..8b3fd8c66781 100644
--- a/pkgs/development/libraries/qt-4.x/4.8/default.nix
+++ b/pkgs/development/libraries/qt-4.x/4.8/default.nix
@@ -68,6 +68,7 @@ stdenv.mkDerivation rec {
     [ ./glib-2.32.patch
       ./libressl.patch
       ./parallel-configure.patch
+      ./clang-5-darwin.patch
       ./qt-4.8.7-unixmake-darwin.patch
       (substituteAll {
         src = ./dlopen-absolute-paths.diff;
@@ -106,7 +107,13 @@ stdenv.mkDerivation rec {
     ++ stdenv.lib.optional stdenv.isAarch64 (fetchpatch {
         url = "https://src.fedoraproject.org/rpms/qt/raw/ecf530486e0fb7fe31bad26805cde61115562b2b/f/qt-aarch64.patch";
         sha256 = "1fbjh78nmafqmj7yk67qwjbhl3f6ylkp6x33b1dqxfw9gld8b3gl";
-      });
+      })
+    ++ stdenv.lib.optionals stdenv.hostPlatform.isMusl [
+        ./qt-musl.patch
+        ./qt-musl-iconv-no-bom.patch
+        ./patch-qthread-stacksize.diff
+        ./qsettings-recursive-global-mutex.patch
+      ];
 
   preConfigure = ''
     export LD_LIBRARY_PATH="`pwd`/lib:$LD_LIBRARY_PATH"
@@ -169,13 +176,14 @@ stdenv.mkDerivation rec {
   enableParallelBuilding = true;
 
   NIX_CFLAGS_COMPILE =
-    optionalString stdenv.isLinux "-std=gnu++98" # gnu++ in (Obj)C flags is no good on Darwin
-    + optionalString (stdenv.isFreeBSD || stdenv.isDarwin)
-      " -I${glib.dev}/include/glib-2.0 -I${glib.out}/lib/glib-2.0/include"
-    + optionalString stdenv.isDarwin " -I${libcxx}/include/c++/v1";
-
-  NIX_LDFLAGS = optionalString (stdenv.isFreeBSD || stdenv.isDarwin)
-    "-lglib-2.0";
+    # with gcc7 the warnings blow the log over Hydra's limit
+    [ "-Wno-expansion-to-defined" "-Wno-unused-local-typedefs" ]
+    ++ optional stdenv.isLinux "-std=gnu++98" # gnu++ in (Obj)C flags is no good on Darwin
+    ++ optionals (stdenv.isFreeBSD || stdenv.isDarwin)
+      [ "-I${glib.dev}/include/glib-2.0" "-I${glib.out}/lib/glib-2.0/include" ]
+    ++ optional stdenv.isDarwin "-I${libcxx}/include/c++/v1";
+
+  NIX_LDFLAGS = optionalString (stdenv.isFreeBSD || stdenv.isDarwin) "-lglib-2.0";
 
   preBuild = optionalString stdenv.isDarwin ''
     # resolve "extra qualification on member" error
diff --git a/pkgs/development/libraries/qt-4.x/4.8/patch-qthread-stacksize.diff b/pkgs/development/libraries/qt-4.x/4.8/patch-qthread-stacksize.diff
new file mode 100644
index 000000000000..53a4c70ac3ae
--- /dev/null
+++ b/pkgs/development/libraries/qt-4.x/4.8/patch-qthread-stacksize.diff
@@ -0,0 +1,54 @@
+--- a/src/corelib/thread/qthread_unix.cpp.orig	2015-11-23 19:05:40.000000000 +0100
++++ b/src/corelib/thread/qthread_unix.cpp	2015-11-24 11:22:31.000000000 +0100
+@@ -79,6 +79,7 @@
+ #endif
+ 
++#include <sys/resource.h> // getrlimit/setrlimit
+ #if defined(Q_OS_MAC)
+ # ifdef qDebug
+ #   define old_qDebug qDebug
+ #   undef qDebug
+@@ -649,6 +650,43 @@
+ #endif // QT_HAS_THREAD_PRIORITY_SCHEDULING
+ 
+ 
++    if (d->stackSize == 0) {
++        // Fix the default (too small) stack size for threads on OS X,
++        // which also affects the thread pool.
++        // See also:
++        // https://bugreports.qt.io/browse/QTBUG-2568
++        // This fix can also be found in Chromium:
++        // https://chromium.googlesource.com/chromium/src.git/+/master/base/threading/platform_thread_mac.mm#186
++
++        // The Mac OS X default for a pthread stack size is 512kB.
++        // Libc-594.1.4/pthreads/pthread.c's pthread_attr_init uses
++        // DEFAULT_STACK_SIZE for this purpose.
++        //
++        // 512kB isn't quite generous enough for some deeply recursive threads that
++        // otherwise request the default stack size by specifying 0. Here, adopt
++        // glibc's behavior as on Linux, which is to use the current stack size
++        // limit (ulimit -s) as the default stack size. See
++        // glibc-2.11.1/nptl/nptl-init.c's __pthread_initialize_minimal_internal. To
++        // avoid setting the limit below the Mac OS X default or the minimum usable
++        // stack size, these values are also considered. If any of these values
++        // can't be determined, or if stack size is unlimited (ulimit -s unlimited),
++        // stack_size is left at 0 to get the system default.
++        //
++        // Mac OS X normally only applies ulimit -s to the main thread stack. On
++        // contemporary OS X and Linux systems alike, this value is generally 8MB
++        // or in that neighborhood.
++        size_t default_stack_size = 0;
++        struct rlimit stack_rlimit;
++        if (pthread_attr_getstacksize(&attr, &default_stack_size) == 0 &&
++            getrlimit(RLIMIT_STACK, &stack_rlimit) == 0 &&
++            stack_rlimit.rlim_cur != RLIM_INFINITY) {
++            default_stack_size =
++                    std::max(std::max(default_stack_size,
++                                      static_cast<size_t>(PTHREAD_STACK_MIN)),
++                             static_cast<size_t>(stack_rlimit.rlim_cur));
++        }
++        d->stackSize = default_stack_size;
++    }
+     if (d->stackSize > 0) {
+ #if defined(_POSIX_THREAD_ATTR_STACKSIZE) && (_POSIX_THREAD_ATTR_STACKSIZE-0 > 0)
+         int code = pthread_attr_setstacksize(&attr, d->stackSize);
diff --git a/pkgs/development/libraries/qt-4.x/4.8/qsettings-recursive-global-mutex.patch b/pkgs/development/libraries/qt-4.x/4.8/qsettings-recursive-global-mutex.patch
new file mode 100644
index 000000000000..229123c54f76
--- /dev/null
+++ b/pkgs/development/libraries/qt-4.x/4.8/qsettings-recursive-global-mutex.patch
@@ -0,0 +1,17 @@
+Calling qsettings before constructing qapplications causes a dead-lock.
+
+http://sourceforge.net/tracker/?func=detail&aid=3168620&group_id=4932&atid=104932
+http://developer.qt.nokia.com/forums/viewthread/10365
+
+
+--- ./src/corelib/io/qsettings.cpp.orig
++++ ./src/corelib/io/qsettings.cpp
+@@ -122,7 +122,7 @@
+ Q_GLOBAL_STATIC(ConfFileCache, unusedCacheFunc)
+ Q_GLOBAL_STATIC(PathHash, pathHashFunc)
+ Q_GLOBAL_STATIC(CustomFormatVector, customFormatVectorFunc)
+-Q_GLOBAL_STATIC(QMutex, globalMutex)
++Q_GLOBAL_STATIC_WITH_ARGS(QMutex, globalMutex, (QMutex::Recursive))
+ static QSettings::Format globalDefaultFormat = QSettings::NativeFormat;
+ 
+ #ifndef Q_OS_WIN
diff --git a/pkgs/development/libraries/qt-4.x/4.8/qt-musl-iconv-no-bom.patch b/pkgs/development/libraries/qt-4.x/4.8/qt-musl-iconv-no-bom.patch
new file mode 100644
index 000000000000..35380ad6714d
--- /dev/null
+++ b/pkgs/development/libraries/qt-4.x/4.8/qt-musl-iconv-no-bom.patch
@@ -0,0 +1,11 @@
+--- qt-everywhere-opensource-src-4.8.5/src/corelib/codecs/qiconvcodec.cpp.orig
++++ qt-everywhere-opensource-src-4.8.5/src/corelib/codecs/qiconvcodec.cpp
+@@ -62,7 +62,7 @@
+ #elif defined(Q_OS_AIX)
+ #  define NO_BOM
+ #  define UTF16 "UCS-2"
+-#elif defined(Q_OS_FREEBSD) || defined(Q_OS_MAC)
++#elif defined(Q_OS_FREEBSD) || defined(Q_OS_MAC) || (defined(Q_OS_LINUX) && !defined(__GLIBC__))
+ #  define NO_BOM
+ #  if Q_BYTE_ORDER == Q_BIG_ENDIAN
+ #    define UTF16 "UTF-16BE"
diff --git a/pkgs/development/libraries/qt-4.x/4.8/qt-musl.patch b/pkgs/development/libraries/qt-4.x/4.8/qt-musl.patch
new file mode 100644
index 000000000000..90b9ccda08c9
--- /dev/null
+++ b/pkgs/development/libraries/qt-4.x/4.8/qt-musl.patch
@@ -0,0 +1,14 @@
+--- qt-everywhere-opensource-src-4.8.5/mkspecs/linux-g++/qplatformdefs.h.orig
++++ qt-everywhere-opensource-src-4.8.5/mkspecs/linux-g++/qplatformdefs.h
+@@ -86,11 +86,7 @@
+ 
+ #undef QT_SOCKLEN_T
+ 
+-#if defined(__GLIBC__) && (__GLIBC__ >= 2)
+ #define QT_SOCKLEN_T            socklen_t
+-#else
+-#define QT_SOCKLEN_T            int
+-#endif
+ 
+ #if defined(_XOPEN_SOURCE) && (_XOPEN_SOURCE >= 500)
+ #define QT_SNPRINTF		::snprintf
diff --git a/pkgs/development/libraries/qt-5/5.10/default.nix b/pkgs/development/libraries/qt-5/5.10/default.nix
index cf66e60d5696..eeff34568332 100644
--- a/pkgs/development/libraries/qt-5/5.10/default.nix
+++ b/pkgs/development/libraries/qt-5/5.10/default.nix
@@ -101,10 +101,11 @@ let
       qtxmlpatterns = callPackage ../modules/qtxmlpatterns.nix {};
 
       env = callPackage ../qt-env.nix {};
-      full = env "qt-${qtbase.version}" ([
+      full = env "qt-full-${qtbase.version}" ([
         qtcharts qtconnectivity qtdeclarative qtdoc qtgraphicaleffects
-        qtimageformats qtlocation qtmultimedia qtquickcontrols qtscript
-        qtsensors qtserialport qtsvg qttools qttranslations qtwebsockets
+        qtimageformats qtlocation qtmultimedia qtquickcontrols qtquickcontrols2
+        qtscript qtsensors qtserialport qtsvg qttools qttranslations
+        qtvirtualkeyboard qtwebchannel qtwebengine qtwebkit qtwebsockets
         qtx11extras qtxmlpatterns
       ] ++ optional (!stdenv.isDarwin) qtwayland
         ++ optional (stdenv.isDarwin) qtmacextras);
diff --git a/pkgs/development/libraries/qt-5/5.10/qtbase-darwin.patch b/pkgs/development/libraries/qt-5/5.10/qtbase-darwin.patch
index e85a284f3bb6..fa389fe55c2f 100644
--- a/pkgs/development/libraries/qt-5/5.10/qtbase-darwin.patch
+++ b/pkgs/development/libraries/qt-5/5.10/qtbase-darwin.patch
@@ -1,3 +1,16 @@
+diff --git a/src/platformsupport/fontdatabases/mac/qfontengine_coretext.mm b/src/platformsupport/fontdatabases/mac/qfontengine_coretext.mm
+index 66baf16..89794ef 100644
+--- a/src/platformsupport/fontdatabases/mac/qfontengine_coretext.mm
++++ b/src/platformsupport/fontdatabases/mac/qfontengine_coretext.mm
+@@ -830,7 +830,7 @@ void QCoreTextFontEngine::getUnscaledGlyph(glyph_t glyph, QPainterPath *path, gl
+ 
+ QFixed QCoreTextFontEngine::emSquareSize() const
+ {
+-    return QFixed::QFixed(int(CTFontGetUnitsPerEm(ctfont)));
++    return QFixed(int(CTFontGetUnitsPerEm(ctfont)));
+ }
+ 
+ QFontEngine *QCoreTextFontEngine::cloneWithSize(qreal pixelSize) const
 diff --git a/src/plugins/bearer/corewlan/qcorewlanengine.mm b/src/plugins/bearer/corewlan/qcorewlanengine.mm
 index 341d3bccf2..3368234c26 100644
 --- a/src/plugins/bearer/corewlan/qcorewlanengine.mm
diff --git a/pkgs/development/libraries/qt-5/5.6/default.nix b/pkgs/development/libraries/qt-5/5.6/default.nix
index 1200884a30ce..8793b2bb9f01 100644
--- a/pkgs/development/libraries/qt-5/5.6/default.nix
+++ b/pkgs/development/libraries/qt-5/5.6/default.nix
@@ -113,7 +113,7 @@ let
       qtxmlpatterns = callPackage ../modules/qtxmlpatterns.nix {};
 
       env = callPackage ../qt-env.nix {};
-      full = env "qt-${qtbase.version}" [
+      full = env "qt-full-${qtbase.version}" [
         qtconnectivity qtdeclarative qtdoc qtgraphicaleffects qtimageformats
         qtlocation qtmultimedia qtquickcontrols qtquickcontrols2 qtscript
         qtsensors qtserialport qtsvg qttools qttranslations qtwayland
diff --git a/pkgs/development/libraries/qt-5/5.9/default.nix b/pkgs/development/libraries/qt-5/5.9/default.nix
index 9afa818c36e3..5afcdaa430e5 100644
--- a/pkgs/development/libraries/qt-5/5.9/default.nix
+++ b/pkgs/development/libraries/qt-5/5.9/default.nix
@@ -37,7 +37,7 @@ let
   srcs = import ./srcs.nix { inherit fetchurl; inherit mirror; };
 
   patches = {
-    qtbase = [ ./qtbase.patch ];
+    qtbase = [ ./qtbase.patch ] ++ optional stdenv.isDarwin ./qtbase-darwin.patch;
     qtdeclarative = [ ./qtdeclarative.patch ];
     qtscript = [ ./qtscript.patch ];
     qtserialport = [ ./qtserialport.patch ];
@@ -101,11 +101,12 @@ let
       qtxmlpatterns = callPackage ../modules/qtxmlpatterns.nix {};
 
       env = callPackage ../qt-env.nix {};
-      full = env "qt-${qtbase.version}" ([
+      full = env "qt-full-${qtbase.version}" ([
         qtcharts qtconnectivity qtdeclarative qtdoc qtgraphicaleffects
-        qtimageformats qtlocation qtmultimedia qtquickcontrols qtscript
-        qtsensors qtserialport qtsvg qttools qttranslations qtwebsockets
-        qtx11extras qtxmlpatterns qtvirtualkeyboard
+        qtimageformats qtlocation qtmultimedia qtquickcontrols qtquickcontrols2
+        qtscript qtsensors qtserialport qtsvg qttools qttranslations
+        qtvirtualkeyboard qtwebchannel qtwebengine qtwebkit qtwebsockets
+        qtx11extras qtxmlpatterns
       ] ++ optional (!stdenv.isDarwin) qtwayland
         ++ optional (stdenv.isDarwin) qtmacextras);
 
diff --git a/pkgs/development/libraries/qt-5/5.9/qtbase-darwin.patch b/pkgs/development/libraries/qt-5/5.9/qtbase-darwin.patch
new file mode 100644
index 000000000000..1c3a9b05cb24
--- /dev/null
+++ b/pkgs/development/libraries/qt-5/5.9/qtbase-darwin.patch
@@ -0,0 +1,48 @@
+diff --git a/src/platformsupport/fontdatabases/mac/qfontengine_coretext.mm b/src/platformsupport/fontdatabases/mac/qfontengine_coretext.mm
+index 66baf16..89794ef 100644
+--- a/src/platformsupport/fontdatabases/mac/qfontengine_coretext.mm
++++ b/src/platformsupport/fontdatabases/mac/qfontengine_coretext.mm
+@@ -830,7 +830,7 @@ void QCoreTextFontEngine::getUnscaledGlyph(glyph_t glyph, QPainterPath *path, gl
+ 
+ QFixed QCoreTextFontEngine::emSquareSize() const
+ {
+-    return QFixed::QFixed(int(CTFontGetUnitsPerEm(ctfont)));
++    return QFixed(int(CTFontGetUnitsPerEm(ctfont)));
+ }
+ 
+ QFontEngine *QCoreTextFontEngine::cloneWithSize(qreal pixelSize) const
+diff --git a/src/plugins/bearer/corewlan/qcorewlanengine.mm b/src/plugins/bearer/corewlan/qcorewlanengine.mm
+index 341d3bc..3368234 100644
+--- a/src/plugins/bearer/corewlan/qcorewlanengine.mm
++++ b/src/plugins/bearer/corewlan/qcorewlanengine.mm
+@@ -287,7 +287,7 @@ void QScanThread::getUserConfigurations()
+     QMacAutoReleasePool pool;
+     userProfiles.clear();
+ 
+-    NSArray<NSString *> *wifiInterfaces = [CWWiFiClient interfaceNames];
++    NSArray *wifiInterfaces = [CWWiFiClient interfaceNames];
+     for (NSString *ifName in wifiInterfaces) {
+ 
+         CWInterface *wifiInterface = [[CWWiFiClient sharedWiFiClient] interfaceWithName:ifName];
+@@ -602,7 +602,7 @@ void QCoreWlanEngine::doRequestUpdate()
+ 
+     QMacAutoReleasePool pool;
+ 
+-    NSArray<NSString *> *wifiInterfaces = [CWWiFiClient interfaceNames];
++    NSArray *wifiInterfaces = [CWWiFiClient interfaceNames];
+     for (NSString *ifName in wifiInterfaces) {
+             scanThread->interfaceName = QString::fromNSString(ifName);
+             scanThread->start();
+diff --git a/src/plugins/platforms/cocoa/qcocoawindow.mm b/src/plugins/platforms/cocoa/qcocoawindow.mm
+index 5cd4beb..84919e6 100644
+--- a/src/plugins/platforms/cocoa/qcocoawindow.mm
++++ b/src/plugins/platforms/cocoa/qcocoawindow.mm
+@@ -320,7 +320,7 @@ static void qt_closePopups()
+ + (void)applicationActivationChanged:(NSNotification*)notification
+ {
+     const id sender = self;
+-    NSEnumerator<NSWindow*> *windowEnumerator = nullptr;
++    NSEnumerator *windowEnumerator = nullptr;
+     NSApplication *application = [NSApplication sharedApplication];
+ 
+ #if QT_MACOS_PLATFORM_SDK_EQUAL_OR_ABOVE(__MAC_10_12)
diff --git a/pkgs/development/libraries/qt-5/modules/qtwebkit.nix b/pkgs/development/libraries/qt-5/modules/qtwebkit.nix
index 4dce9c4e22e5..6834b7ce87b6 100644
--- a/pkgs/development/libraries/qt-5/modules/qtwebkit.nix
+++ b/pkgs/development/libraries/qt-5/modules/qtwebkit.nix
@@ -31,7 +31,8 @@ qtModule {
   '';
 
   NIX_CFLAGS_COMPILE =
-    optionals flashplayerFix
+    [ "-Wno-expansion-to-defined" ] # with gcc7 this warning blows the log over Hydra's limit
+    ++ optionals flashplayerFix
       [
         ''-DNIXPKGS_LIBGTK2="${getLib gtk2}/lib/libgtk-x11-2.0"''
         ''-DNIXPKGS_LIBGDK2="${getLib gdk_pixbuf}/lib/libgdk-x11-2.0"''
diff --git a/pkgs/development/libraries/qt-5/qt-env.nix b/pkgs/development/libraries/qt-5/qt-env.nix
index 728761689b42..49585f601d14 100644
--- a/pkgs/development/libraries/qt-5/qt-env.nix
+++ b/pkgs/development/libraries/qt-5/qt-env.nix
@@ -13,9 +13,9 @@ buildEnv {
     cat >"$out/bin/qt.conf" <<EOF
     [Paths]
     Prefix = $out
-    Plugins = $qtPluginPrefix
-    Qml2Imports = $qtQmlPrefix
-    Documentation = $qtDocPrefix
+    Plugins = ${qtbase.qtPluginPrefix}
+    Qml2Imports = ${qtbase.qtQmlPrefix}
+    Documentation = ${qtbase.qtDocPrefix}
     EOF
   '';
 }
diff --git a/pkgs/development/libraries/qtscriptgenerator/qt-4.8.patch b/pkgs/development/libraries/qtscriptgenerator/qt-4.8.patch
index 0b02b0097252..8fe643e2c98f 100644
--- a/pkgs/development/libraries/qtscriptgenerator/qt-4.8.patch
+++ b/pkgs/development/libraries/qtscriptgenerator/qt-4.8.patch
@@ -1,4 +1,4 @@
-Origin: http://pkgs.fedoraproject.org/gitweb/?p=qtscriptgenerator.git;a=blob_plain;f=qtscriptgenerator-src-0.1.0-no_QFileOpenEvent.patch;h=f397b5ab13bcfc268e6d7b7ba4c6bc66ae38b5c0;hb=HEAD
+Origin: http://src.fedoraproject.org/gitweb/?p=qtscriptgenerator.git;a=blob_plain;f=qtscriptgenerator-src-0.1.0-no_QFileOpenEvent.patch;h=f397b5ab13bcfc268e6d7b7ba4c6bc66ae38b5c0;hb=HEAD
 diff -up qtscriptgenerator-src-0.1.0/generator/typesystem_gui-common.xml.no_QFileOpenEvent qtscriptgenerator-src-0.1.0/generator/typesystem_gui-common.xml
 --- qtscriptgenerator-src-0.1.0/generator/typesystem_gui-common.xml.no_QFileOpenEvent	2011-12-22 11:34:52.615149619 -0600
 +++ qtscriptgenerator-src-0.1.0/generator/typesystem_gui-common.xml	2011-12-22 11:35:31.808659632 -0600
diff --git a/pkgs/development/libraries/quickder/default.nix b/pkgs/development/libraries/quickder/default.nix
index 73bd9e863cde..77e76ad638ab 100644
--- a/pkgs/development/libraries/quickder/default.nix
+++ b/pkgs/development/libraries/quickder/default.nix
@@ -1,32 +1,53 @@
-{ stdenv, fetchFromGitHub, fetchurl, hexio, python, which, asn2quickder, bash }:
+{ stdenv, fetchFromGitHub, fetchurl, python2Packages, hexio
+, which, cmake, bash, arpa2cm, git, asn2quickder, pkgconfig }:
 
 stdenv.mkDerivation rec {
   pname = "quickder";
   name = "${pname}-${version}";
-  version = "1.0-RC2";
+  version = "1.2-6";
 
   src = fetchFromGitHub {
-    sha256 = "1nzk8x6qzpvli8bf74dc2qya63nlppqjrnkaxvjxr2dbqb8qcrqd";
+    sha256 = "00wifjydgmqw2i5vmr049visc3shjqccgzqynkmmhkjhs86ghzr6";
     rev = "version-${version}";
     owner = "vanrein";
     repo = "quick-der";
   };
 
-  buildInputs = [ which asn2quickder bash ];
+  buildInputs = with python2Packages; [
+    arpa2cm
+    asn1ate
+    bash
+    cmake
+    git
+    hexio
+    pyparsing
+    python
+    six
+    which
+    asn1ate
+    asn2quickder
+    pkgconfig
+  ];
 
-  patchPhase = ''
-    substituteInPlace Makefile \
-      --replace 'lib tool test rfc' 'lib test rfc'
-    substituteInPlace ./rfc/Makefile \
-      --replace 'ASN2QUICKDER_CMD = ' 'ASN2QUICKDER_CMD = ${asn2quickder}/bin/asn2quickder #'
-    '';
+  postPatch = ''
+    substituteInPlace ./CMakeLists.txt \
+      --replace "get_version_from_git" "set (Quick-DER_VERSION 1.2) #"
+    substituteInPlace ./CMakeLists.txt \
+      --replace \$\{ARPA2CM_TOOLCHAIN_DIR} "$out/share/ARPA2CM/toolchain/"
+    patchShebangs python/scripts/
+  '';
 
-  installFlags = "ASN2QUICKDER_DIR=${asn2quickder}/bin ASN2QUICKDER_CMD=${asn2quickder}/bin/asn2quickder";
-  installPhase = ''
-    mkdir -p $out/lib $out/man
-    make DESTDIR=$out PREFIX=/ all
-    make DESTDIR=$out PREFIX=/ install
-    '';
+  cmakeFlags = [
+    "-DNO_TESTING=ON"
+    "-DARPA2CM_TOOLCHAIN_DIR=$out/share/ARPA2CM/toolchain/"
+    "-DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON"
+    "-DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON"
+    "-DPACKAGE_NO_PACKAGE_REGISTRY=ON"
+  ];
+
+  preConfigure = ''
+    export PREFIX=$out
+  '';
 
   meta = with stdenv.lib; {
     description = "Quick (and Easy) DER, a Library for parsing ASN.1";
diff --git a/pkgs/development/libraries/rocksdb/default.nix b/pkgs/development/libraries/rocksdb/default.nix
index a791c8994856..b37a9bc04c39 100644
--- a/pkgs/development/libraries/rocksdb/default.nix
+++ b/pkgs/development/libraries/rocksdb/default.nix
@@ -1,4 +1,7 @@
-{ stdenv, fetchFromGitHub, fixDarwinDylibNames
+{ stdenv
+, fetchFromGitHub
+, fixDarwinDylibNames
+, which, perl
 
 # Optional Arguments
 , snappy ? null, google-gflags ? null, zlib ? null, bzip2 ? null, lz4 ? null
@@ -15,15 +18,16 @@ let
 in
 stdenv.mkDerivation rec {
   name = "rocksdb-${version}";
-  version = "5.1.2";
+  version = "5.10.2";
 
   src = fetchFromGitHub {
     owner = "facebook";
     repo = "rocksdb";
     rev = "v${version}";
-    sha256 = "1smahz67gcd86nkdqaml78lci89dza131mlj5472r4sxjdxsx277";
+    sha256 = "00qnd56v4qyzxg0b3ya3flf2jhbbfaibj1y53bd5ciaw3af6zxnd";
   };
-
+  
+  nativeBuildInputs = [ which perl ];
   buildInputs = [ snappy google-gflags zlib bzip2 lz4 malloc fixDarwinDylibNames ];
 
   postPatch = ''
@@ -39,16 +43,20 @@ stdenv.mkDerivation rec {
 
   ${if enableLite then "LIBNAME" else null} = "librocksdb_lite";
   ${if enableLite then "CXXFLAGS" else null} = "-DROCKSDB_LITE=1";
-
-  buildFlags = [
+  
+  buildAndInstallFlags = [
+    "USE_RTTI=1"
     "DEBUG_LEVEL=0"
+    "DISABLE_WARNING_AS_ERROR=1"     
+  ];
+
+  buildFlags = buildAndInstallFlags ++ [
     "shared_lib"
     "static_lib"
   ];
 
-  installFlags = [
+  installFlags = buildAndInstallFlags ++ [
     "INSTALL_PATH=\${out}"
-    "DEBUG_LEVEL=0"
     "install-shared"
     "install-static"
   ];
@@ -66,6 +74,6 @@ stdenv.mkDerivation rec {
     description = "A library that provides an embeddable, persistent key-value store for fast storage";
     license = licenses.bsd3;
     platforms = platforms.allBut [ "i686-linux" ];
-    maintainers = with maintainers; [ wkennington ];
+    maintainers = with maintainers; [ adev wkennington ];
   };
 }
diff --git a/pkgs/development/libraries/science/biology/htslib/default.nix b/pkgs/development/libraries/science/biology/htslib/default.nix
index b3c6d9f26d47..2144a7f78935 100644
--- a/pkgs/development/libraries/science/biology/htslib/default.nix
+++ b/pkgs/development/libraries/science/biology/htslib/default.nix
@@ -3,11 +3,11 @@
 stdenv.mkDerivation rec {
   name = "${pname}-${version}";
   pname = "htslib";
-  version = "1.6";
+  version = "1.7";
 
   src = fetchurl {
     url = "https://github.com/samtools/htslib/releases/download/${version}/${name}.tar.bz2";
-    sha256 = "1jsca3hg4rbr6iqq6imkj4lsvgl8g9768bcmny3hlff2w25vx24m";
+    sha256 = "be3d4e25c256acdd41bebb8a7ad55e89bb18e2fc7fc336124b1e2c82ae8886c6";
   };
 
   # perl is only used during the check phase.
diff --git a/pkgs/development/libraries/science/math/caffe2/default.nix b/pkgs/development/libraries/science/math/caffe2/default.nix
new file mode 100644
index 000000000000..b055acba9f15
--- /dev/null
+++ b/pkgs/development/libraries/science/math/caffe2/default.nix
@@ -0,0 +1,140 @@
+{ stdenv, lib, config, fetchFromGitHub
+, cmake
+, glog, google-gflags, gtest
+, protobuf, snappy
+, python, future, six, python-protobuf, numpy, pydot
+, eigen3
+, doxygen
+, useCuda ? (config.cudaSupport or false), cudatoolkit ? null
+, useCudnn ? (config.cudnnSupport or false), cudnn ? null
+, useOpenmp ? false, openmp ? null
+, useOpencv3 ? true, opencv3 ? null
+, useLeveldb ? false, leveldb ? null
+, useLmdb ? true, lmdb ? null
+, useRocksdb ? false, rocksdb ? null
+, useZeromq ? false, zeromq ? null
+, useMpi ? false, mpi ? null
+# TODO: distributed computations
+#, useGloo ? false
+#, useNccl ? false
+#, useNnpack ? false
+}:
+
+assert useCuda -> cudatoolkit != null;
+assert useCudnn -> (useCuda && cudnn != null);
+assert useOpencv3 -> opencv3 != null;
+assert useLeveldb -> leveldb != null;
+assert useLmdb -> lmdb != null;
+assert useRocksdb -> rocksdb != null;
+assert useZeromq -> zeromq != null;
+assert useMpi -> mpi != null;
+
+let
+  # Third party modules that caffe2 holds as git submodules.
+  # Download them and create symlinks from caffe2/third_party.
+  installExtraSrc = extra: ''
+    rmdir "third_party/${extra.dst}"
+    ln -s "${extra.src}" "third_party/${extra.dst}"
+  '';
+
+  cub = {
+    src = fetchFromGitHub rec {
+      owner  = "NVlabs";
+      repo   = "cub";
+      rev    = "v1.7.4";
+      sha256 = "0ksd5n1lxqhm5l5cd2lps4cszhjkf6gmzahaycs7nxb06qci8c66";
+    };
+    dst = "cub";
+  };
+
+  pybind11 = {
+    src = fetchFromGitHub {
+      owner  = "pybind";
+      repo   = "pybind11";
+      rev    = "86e2ad4f77442c3350f9a2476650da6bee253c52";
+      sha256 = "05gi58dirvc8fgm0avpydvidzsbh2zrzgfaq671ym09f6dz0bcgz";
+    };
+    dst = "pybind11";
+  };
+in
+
+stdenv.mkDerivation rec {
+  name = "caffe2-${version}";
+  version = "0.8.1";
+  src = fetchFromGitHub {
+    owner = "caffe2";
+    repo = "caffe2";
+    rev = "v${version}";
+    sha256 = "18y7zjc69j6n5642l9caddl641b0djf3pjn4wacdsc1wk1jiyqk8";
+  };
+
+  nativeBuildInputs = [ cmake doxygen gtest ];
+  outputs = [ "bin" "out" ];
+  propagatedBuildOutputs = [ ]; # otherwise propagates out -> bin cycle
+
+  buildInputs = [ glog google-gflags protobuf snappy eigen3 ]
+    ++ lib.optional useCuda cudatoolkit
+    ++ lib.optional useCudnn cudnn
+    ++ lib.optional useOpenmp openmp
+    ++ lib.optional useOpencv3 opencv3
+    ++ lib.optional useLeveldb leveldb
+    ++ lib.optional useLmdb lmdb
+    ++ lib.optional useRocksdb rocksdb
+    ++ lib.optional useZeromq zeromq
+  ;
+  propagatedBuildInputs = [ numpy future six python-protobuf pydot ];
+
+  patches = lib.optional stdenv.cc.isClang [ ./update_clang_cvtsh_bugfix.patch ];
+
+  cmakeFlags = [ ''-DBUILD_TEST=OFF''
+                 ''-DBUILD_PYTHON=ON''
+                 ''-DUSE_CUDA=${if useCuda then ''ON''else ''OFF''}''
+                 ''-DUSE_OPENMP=${if useOpenmp then ''ON''else ''OFF''}''
+                 ''-DUSE_OPENCV=${if useOpencv3 then ''ON''else ''OFF''}''
+                 ''-DUSE_MPI=${if useMpi then ''ON''else ''OFF''}''
+                 ''-DUSE_LEVELDB=${if useLeveldb then ''ON''else ''OFF''}''
+                 ''-DUSE_LMDB=${if useLmdb then ''ON''else ''OFF''}''
+                 ''-DUSE_ROCKSDB=${if useRocksdb then ''ON''else ''OFF''}''
+                 ''-DUSE_ZMQ=${if useZeromq  then ''ON''else ''OFF''}''
+                 ''-DUSE_GLOO=OFF''
+                 ''-DUSE_NNPACK=OFF''
+                 ''-DUSE_NCCL=OFF''
+                 ''-DUSE_REDIS=OFF''
+                 ''-DUSE_FFMPEG=OFF''
+               ]
+               ++ lib.optional useCuda [
+                 ''-DCUDA_TOOLKIT_ROOT_DIR=${cudatoolkit}''
+                 ''-DCUDA_FAST_MATH=ON''
+                 ''-DCUDA_HOST_COMPILER=${cudatoolkit.cc}/bin/gcc''
+               ];
+
+  preConfigure = ''
+    ${installExtraSrc cub}
+    ${installExtraSrc pybind11}
+    # XXX hack
+    export NIX_CFLAGS_COMPILE="-I ${eigen3}/include/eigen3/ $NIX_CFLAGS_COMPILE"
+  '';
+
+  postInstall = ''
+    moveToOutput "bin" "$bin"
+    mkdir -p $out/lib/${python.libPrefix}
+    ln -s $out/ $out/${python.sitePackages}
+  '';
+
+  doCheck = false;
+  enableParallelBuilding = true;
+
+  meta = {
+    homepage = https://caffe2.ai/;
+    description = "A new lightweight, modular, and scalable deep learning framework";
+    longDescription = ''
+      Caffe2 aims to provide an easy and straightforward way for you to experiment
+      with deep learning and leverage community contributions of new models and
+      algorithms. You can bring your creations to scale using the power of GPUs in the
+      cloud or to the masses on mobile with Caffe2's cross-platform libraries.
+    '';
+    platforms = with stdenv.lib.platforms; linux ++ darwin;
+    license = stdenv.lib.licenses.asl20;
+    maintainers = with stdenv.lib.maintainers; [ yuriaisaka ];
+  };
+}
diff --git a/pkgs/development/libraries/science/math/caffe2/update_clang_cvtsh_bugfix.patch b/pkgs/development/libraries/science/math/caffe2/update_clang_cvtsh_bugfix.patch
new file mode 100644
index 000000000000..d908cb6ba80b
--- /dev/null
+++ b/pkgs/development/libraries/science/math/caffe2/update_clang_cvtsh_bugfix.patch
@@ -0,0 +1,55 @@
+diff --git a/caffe2/perfkernels/cvtsh_ss_bugfix.h b/caffe2/perfkernels/cvtsh_ss_bugfix.h
+index bd06681..00172b7 100644
+--- a/caffe2/perfkernels/cvtsh_ss_bugfix.h
++++ b/caffe2/perfkernels/cvtsh_ss_bugfix.h
+@@ -1,10 +1,36 @@
++/**
++ * Copyright (c) 2016-present, Facebook, Inc.
++ *
++ * Licensed under the Apache License, Version 2.0 (the "License");
++ * you may not use this file except in compliance with the License.
++ * You may obtain a copy of the License at
++ *
++ *     http://www.apache.org/licenses/LICENSE-2.0
++ *
++ * Unless required by applicable law or agreed to in writing, software
++ * distributed under the License is distributed on an "AS IS" BASIS,
++ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
++ * See the License for the specific language governing permissions and
++ * limitations under the License.
++ */
++
+ #pragma once
+ 
+-#if defined(__APPLE__) && (__clang_major__ < 8)
++// Apple clang was fixed in 8.1
++#if defined(__apple_build_version__) && ((__clang_major__ < 8) || ((__clang_major__ == 8) && (__clang_minor__ < 1)))
++#define __APPLE_NEED_FIX 1
++#endif
++
++// Regular clang was fixed in 3.9
++#if defined(__clang__) && (__clang_major__ < 4) && (__clang_minor__ < 9)
++#define __CLANG_NEED_FIX 1
++#endif
++
++#if __APPLE_NEED_FIX || __CLANG_NEED_FIX
+ 
+ #include <emmintrin.h>
+ 
+-// This version of apple clang has a bug that _cvtsh_ss is not defined, see
++// This version of clang has a bug that _cvtsh_ss is not defined, see
+ // https://reviews.llvm.org/D16177
+ static __inline float
+     __attribute__((__always_inline__, __nodebug__, __target__("f16c")))
+@@ -15,7 +41,10 @@ _cvtsh_ss(unsigned short a)
+   return r[0];
+ }
+ 
+-#endif // defined(__APPLE__) && (__clang_major__ < 8)
++#endif // __APPLE_NEED_FIX || __CLANG_NEED_FIX
++
++#undef __APPLE_NEED_FIX
++#undef __CLANG_NEED_FIX
+ 
+ #ifdef _MSC_VER
+ 
diff --git a/pkgs/development/libraries/science/math/openblas/default.nix b/pkgs/development/libraries/science/math/openblas/default.nix
index 42eaf71942e7..07d2a04c5e20 100644
--- a/pkgs/development/libraries/science/math/openblas/default.nix
+++ b/pkgs/development/libraries/science/math/openblas/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, gfortran, perl, which, config, coreutils
+{ stdenv, fetchurl, fetchpatch, gfortran, perl, which, config, coreutils
 # Most packages depending on openblas expect integer width to match
 # pointer width, but some expect to use 32-bit integers always
 # (for compatibility with reference BLAS).
@@ -115,9 +115,16 @@ stdenv.mkDerivation {
       "NUM_THREADS=64"
       "INTERFACE64=${if blas64 then "1" else "0"}"
       "NO_STATIC=1"
-    ]
+    ] ++ stdenv.lib.optional (stdenv.hostPlatform.libc == "musl") "NO_AFFINITY=1"
     ++ mapAttrsToList (var: val: var + "=" + val) config;
 
+  patches = stdenv.lib.optional (stdenv.hostPlatform.libc != "glibc")
+    # https://github.com/xianyi/OpenBLAS/pull/1247
+    (fetchpatch {
+      url = "https://github.com/xianyi/OpenBLAS/commit/88a35ff457f55e527e0e8a503a0dc61976c1846d.patch";
+      sha256 = "1a3qrhvl5hp06c53fjqghq4zgf6ls7narm06l0shcvs57hznh09n";
+    });
+
   doCheck = true;
   checkTarget = "tests";
 
diff --git a/pkgs/development/libraries/spice/default.nix b/pkgs/development/libraries/spice/default.nix
index 808bfd4f811d..c8e98d3d28ed 100644
--- a/pkgs/development/libraries/spice/default.nix
+++ b/pkgs/development/libraries/spice/default.nix
@@ -17,12 +17,12 @@ stdenv.mkDerivation rec {
     # the following three patches fix CVE-2016-9577 and CVE-2016-9578
     (fetchpatch {
       name = "0001-Prevent-possible-DoS-attempts-during-protocol-handsh.patch";
-      url = "http://pkgs.fedoraproject.org/cgit/rpms/spice.git/plain/0001-Prevent-possible-DoS-attempts-during-protocol-handsh.patch?id=d919d639ae5f83a9735a04d843eed675f9357c0d";
+      url = "http://src.fedoraproject.org/cgit/rpms/spice.git/plain/0001-Prevent-possible-DoS-attempts-during-protocol-handsh.patch?id=d919d639ae5f83a9735a04d843eed675f9357c0d";
       sha256 = "11x5566lx5zyl7f39glwsgpzkxb7hpcshx8va5ab3imrns07130q";
     })
     (fetchpatch {
       name = "0002-Prevent-integer-overflows-in-capability-checks.patch";
-      url = "http://pkgs.fedoraproject.org/cgit/rpms/spice.git/plain/0002-Prevent-integer-overflows-in-capability-checks.patch?id=d919d639ae5f83a9735a04d843eed675f9357c0d";
+      url = "http://src.fedoraproject.org/cgit/rpms/spice.git/plain/0002-Prevent-integer-overflows-in-capability-checks.patch?id=d919d639ae5f83a9735a04d843eed675f9357c0d";
       sha256 = "1r1bhq98w93cvvrlrz6jwdfsy261xl3xqs0ppchaa2igyxvxv5z5";
     })
     (fetchpatch {
diff --git a/pkgs/development/libraries/stfl/default.nix b/pkgs/development/libraries/stfl/default.nix
index 1430c3aa9c29..8a8680a498a0 100644
--- a/pkgs/development/libraries/stfl/default.nix
+++ b/pkgs/development/libraries/stfl/default.nix
@@ -13,8 +13,9 @@ stdenv.mkDerivation rec {
   buildPhase = ''
     sed -i s/gcc/cc/g Makefile
     sed -i s%ncursesw/ncurses.h%ncurses.h% stfl_internals.h
-  '' + ( stdenv.lib.optionalString stdenv.isDarwin ''
+  '' + stdenv.lib.optionalString (stdenv.hostPlatform.libc != "glibc") ''
     sed -i 's/LDLIBS += -lncursesw/LDLIBS += -lncursesw -liconv/' Makefile
+  '' + ( stdenv.lib.optionalString stdenv.isDarwin ''
     sed -i s/-soname/-install_name/ Makefile
   '' ) + ''
     make
diff --git a/pkgs/development/libraries/tbb/default.nix b/pkgs/development/libraries/tbb/default.nix
index 13b1970866e7..182fbb35d499 100644
--- a/pkgs/development/libraries/tbb/default.nix
+++ b/pkgs/development/libraries/tbb/default.nix
@@ -16,6 +16,8 @@ with stdenv.lib; stdenv.mkDerivation rec {
     optional (stdver != null) "stdver=${stdver}"
   );
 
+  patches = stdenv.lib.optional stdenv.hostPlatform.isMusl ./glibc-struct-mallinfo.patch;
+
   installPhase = ''
     mkdir -p $out/{lib,share/doc}
     cp "build/"*release*"/"*${stdenv.hostPlatform.extensions.sharedLibrary}* $out/lib/
diff --git a/pkgs/development/libraries/tbb/glibc-struct-mallinfo.patch b/pkgs/development/libraries/tbb/glibc-struct-mallinfo.patch
new file mode 100644
index 000000000000..64056ecb1462
--- /dev/null
+++ b/pkgs/development/libraries/tbb/glibc-struct-mallinfo.patch
@@ -0,0 +1,43 @@
+From b577153a10c98f4e13405dc93ea2ab1a7b990e07 Mon Sep 17 00:00:00 2001
+From: David Huffman <storedbox+alpine@outlook.com>
+Date: Wed, 6 Jan 2016 07:09:30 -0500
+Subject: [PATCH] hard-code glibc's definition of struct mallinfo
+
+---
+ src/tbbmalloc/proxy.h | 20 ++++++++++++++++++++
+ 1 file changed, 20 insertions(+)
+
+diff --git a/src/tbbmalloc/proxy.h b/src/tbbmalloc/proxy.h
+index 781cadc..e1ea1ae 100644
+--- a/src/tbbmalloc/proxy.h
++++ b/src/tbbmalloc/proxy.h
+@@ -32,6 +32,26 @@
+ 
+ #include <stddef.h>
+ 
++// The following definition was taken from /usr/include/malloc.h as provided by
++// the glibc-devel-2.19-17.4.x86_64 package on openSUSE Leap 42.1; it is
++// made available under the GNU Lesser General Public License v2.1 or later.
++// See <https://www.gnu.org/licenses>.
++//
++// Copyright (C) 1996-2014 Free Software Foundation, Inc.
++struct mallinfo
++{
++  int arena;    /* non-mmapped space allocated from system */
++  int ordblks;  /* number of free chunks */
++  int smblks;   /* number of fastbin blocks */
++  int hblks;    /* number of mmapped regions */
++  int hblkhd;   /* space in mmapped regions */
++  int usmblks;  /* maximum total allocated space */
++  int fsmblks;  /* space available in freed fastbin blocks */
++  int uordblks; /* total allocated space */
++  int fordblks; /* total free space */
++  int keepcost; /* top-most, releasable (via malloc_trim) space */
++};
++
+ extern "C" {
+     void * scalable_malloc(size_t size);
+     void * scalable_calloc(size_t nobj, size_t size);
+-- 
+2.6.2
+
diff --git a/pkgs/development/libraries/ti-rpc/default.nix b/pkgs/development/libraries/ti-rpc/default.nix
index 0156c64306c7..d34a6dca7832 100644
--- a/pkgs/development/libraries/ti-rpc/default.nix
+++ b/pkgs/development/libraries/ti-rpc/default.nix
@@ -1,4 +1,4 @@
-{ fetchurl, stdenv, autoreconfHook, libkrb5 }:
+{ fetchurl, fetchpatch, stdenv, autoreconfHook, libkrb5 }:
 
 stdenv.mkDerivation rec {
   name = "libtirpc-1.0.2";
@@ -8,6 +8,12 @@ stdenv.mkDerivation rec {
     sha256 = "1xchbxy0xql7yl7z4n1icj8r7dmly46i22fvm00vdjq64zlmqg3j";
   };
 
+  patches = stdenv.lib.optional stdenv.hostPlatform.isMusl
+    (fetchpatch {
+      url = "https://raw.githubusercontent.com/openembedded/openembedded-core/2be873301420ec6ca2c70d899b7c49a7e2b0954d/meta/recipes-extended/libtirpc/libtirpc/0001-replace-__bzero-with-memset-API.patch";
+      sha256 = "1jmbn0j2bnjp0j9z5vzz5xiwyv3kd28w5pixbqsy2lz6q8nii7cf";
+    });
+
   postPatch = ''
     sed '1i#include <stdint.h>' -i src/xdr_sizeof.c
   '';
diff --git a/pkgs/development/libraries/tinyxml-2/default.nix b/pkgs/development/libraries/tinyxml-2/default.nix
index 9011d33e9222..7f1b3ebcbf5b 100644
--- a/pkgs/development/libraries/tinyxml-2/default.nix
+++ b/pkgs/development/libraries/tinyxml-2/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "tinyxml-2-${version}";
-  version = "4.0.1";
+  version = "6.0.0";
 
   src = fetchFromGitHub {
     repo = "tinyxml2";
     owner = "leethomason";
     rev = version;
-    sha256 = "1a0skfi8rzk53qcxbv88qlvhlqzvsvg4hm20dnx4zw7vrn6anr9y";
+    sha256 = "031fmhpah449h3rkyamzzdpzccrrfrvjb4qn6vx2vjm47jwc54qv";
   };
 
   nativeBuildInputs = [ cmake ];
diff --git a/pkgs/development/libraries/udunits/default.nix b/pkgs/development/libraries/udunits/default.nix
index b8ffc16f9052..b02ac8852371 100644
--- a/pkgs/development/libraries/udunits/default.nix
+++ b/pkgs/development/libraries/udunits/default.nix
@@ -3,10 +3,10 @@
 }:
 
 stdenv.mkDerivation rec {
-    name = "udunits-2.2.24";
+    name = "udunits-2.2.26";
     src = fetchurl {
         url = "ftp://ftp.unidata.ucar.edu/pub/udunits/${name}.tar.gz";
-        sha256 = "15bz2wv46wiwdzai8770gzy05prgj120x6j2hmihavv5y89cbfi0";
+        sha256 = "0v9mqw4drnkzkm57331ail6yvs9485jmi37s40lhvmf7r5lli3rn";
     };
 
     nativeBuildInputs = [ bison flex file ];
diff --git a/pkgs/development/libraries/unibilium/default.nix b/pkgs/development/libraries/unibilium/default.nix
index 53207f855418..7c92e7224f9e 100644
--- a/pkgs/development/libraries/unibilium/default.nix
+++ b/pkgs/development/libraries/unibilium/default.nix
@@ -1,21 +1,21 @@
-{ stdenv, lib, fetchFromGitHub, libtool, pkgconfig }:
+{ stdenv, lib, fetchFromGitHub, libtool, pkgconfig, perl }:
 
 stdenv.mkDerivation rec {
   name = "unibilium-${version}";
 
-  version = "1.2.1";
+  version = "2.0.0";
 
   src = fetchFromGitHub {
     owner = "mauke";
     repo = "unibilium";
     rev = "v${version}";
-    sha256 = "11mbfijdrvbmdlmxs8j4vij78ki0vna89yg3r9n9g1i6j45hiq2r";
+    sha256 = "1wa9a32wzqnxqh1jh554afj13dzjr6mw2wzqzw8d08nza9pg2ra2";
   };
 
   makeFlags = [ "PREFIX=$(out)" ]
     ++ stdenv.lib.optional stdenv.isDarwin "LIBTOOL=${libtool}/bin/libtool";
 
-  nativeBuildInputs = [ pkgconfig ];
+  nativeBuildInputs = [ pkgconfig perl ];
   buildInputs = [ libtool ];
 
   meta = with lib; {
diff --git a/pkgs/development/libraries/uriparser/default.nix b/pkgs/development/libraries/uriparser/default.nix
index 6b5c48a6105d..9b4e3a74afe1 100644
--- a/pkgs/development/libraries/uriparser/default.nix
+++ b/pkgs/development/libraries/uriparser/default.nix
@@ -2,11 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "uriparser-${version}";
-  version = "0.8.4";
+  version = "0.8.5";
 
   src = fetchurl {
     url = "mirror://sourceforge/project/uriparser/Sources/${version}/${name}.tar.bz2";
-    sha256 = "08vvcmg4mcpi2gyrq043c9mfcy3mbrw6lhp86698hx392fjcsz6f";
+    sha256 = "1p9c6lr39rjl4bbzi7wl2nsg72gcz8qhicxh9v043qyr0dfcvsjq";
   };
 
 
diff --git a/pkgs/development/libraries/usbredir/default.nix b/pkgs/development/libraries/usbredir/default.nix
index 4735375de1f9..507c494ea27d 100644
--- a/pkgs/development/libraries/usbredir/default.nix
+++ b/pkgs/development/libraries/usbredir/default.nix
@@ -10,7 +10,8 @@ stdenv.mkDerivation rec {
   };
 
   # Works around bunch of "format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'uint64_t {aka long long unsigned int}'" warnings
-  NIX_CFLAGS_COMPILE = stdenv.lib.optionalString (!stdenv.is64bit) "-Wno-error=format";
+  NIX_CFLAGS_COMPILE = stdenv.lib.optional (!stdenv.is64bit) "-Wno-error=format"
+    ++ [ "-Wno-error=format-truncation" ]; # newly detected with gcc-7
 
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ libusb ];
diff --git a/pkgs/development/libraries/webkitgtk/2.4.nix b/pkgs/development/libraries/webkitgtk/2.4.nix
index 6669b562400f..18d20bf9c780 100644
--- a/pkgs/development/libraries/webkitgtk/2.4.nix
+++ b/pkgs/development/libraries/webkitgtk/2.4.nix
@@ -53,6 +53,8 @@ stdenv.mkDerivation rec {
     ./quartz-webcore.patch
     ./libc++.patch
     ./plugin-none.patch
+  ] ++ optionals stdenv.hostPlatform.isMusl [
+    ./fix-execinfo.patch
   ];
 
   configureFlags = with stdenv.lib; [
diff --git a/pkgs/development/libraries/webkitgtk/fix-execinfo.patch b/pkgs/development/libraries/webkitgtk/fix-execinfo.patch
new file mode 100644
index 000000000000..eb825312f3be
--- /dev/null
+++ b/pkgs/development/libraries/webkitgtk/fix-execinfo.patch
@@ -0,0 +1,20 @@
+--- webkitgtk-2.2.0.orig/Source/WTF/wtf/Assertions.cpp
++++ webkitgtk-2.2.0/Source/WTF/wtf/Assertions.cpp
+@@ -64,7 +64,7 @@
+ #include <windows.h>
+ #endif
+ 
+-#if OS(DARWIN) || (OS(LINUX) && !defined(__UCLIBC__))
++#if OS(DARWIN) || (OS(LINUX) && defined(__GLIBC__) && !defined(__UCLIBC__))
+ #include <cxxabi.h>
+ #include <dlfcn.h>
+ #include <execinfo.h>
+@@ -242,7 +242,7 @@
+ 
+ void WTFGetBacktrace(void** stack, int* size)
+ {
+-#if OS(DARWIN) || (OS(LINUX) && !defined(__UCLIBC__))
++#if OS(DARWIN) || (OS(LINUX) && defined(__GLIBC__) && !defined(__UCLIBC__))
+     *size = backtrace(stack, *size);
+ #elif OS(WINDOWS) && !OS(WINCE)
+     // The CaptureStackBackTrace function is available in XP, but it is not defined
diff --git a/pkgs/development/libraries/webrtc-audio-processing/default.nix b/pkgs/development/libraries/webrtc-audio-processing/default.nix
index f5d49290484f..b5a3aed91d90 100644
--- a/pkgs/development/libraries/webrtc-audio-processing/default.nix
+++ b/pkgs/development/libraries/webrtc-audio-processing/default.nix
@@ -12,6 +12,8 @@ stdenv.mkDerivation rec {
   # signal_processing/filter_ar_fast_q12_armv7.S:88: Error: selected processor does not support `sbfx r11,r6,#12,#16' in ARM mode
   patchPhase = stdenv.lib.optionalString stdenv.isArm ''
     substituteInPlace configure --replace 'armv7*|armv8*' 'disabled'
+  '' + stdenv.lib.optionalString stdenv.hostPlatform.isMusl ''
+    substituteInPlace webrtc/base/checks.cc --replace 'defined(__UCLIBC__)' 1
   '';
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/libraries/wildmidi/default.nix b/pkgs/development/libraries/wildmidi/default.nix
index 9d22833e1c04..06a4e48827ed 100644
--- a/pkgs/development/libraries/wildmidi/default.nix
+++ b/pkgs/development/libraries/wildmidi/default.nix
@@ -1,11 +1,11 @@
 { stdenv, fetchurl, cmake, alsaLib, freepats }:
 
 stdenv.mkDerivation rec {
-  name = "wildmidi-0.3.9";
+  name = "wildmidi-0.4.2";
 
   src = fetchurl {
     url = "https://github.com/Mindwerks/wildmidi/archive/${name}.tar.gz";
-    sha256 = "1fbcsvzn8akvvy7vg6vmnikcc8gh405b4gp1r016bq7yginljwwp";
+    sha256 = "178hm2wh5h7apkcb1a0dyla2ia8569php8ikz62rh0g6dp5l67am";
   };
 
   nativeBuildInputs = [ cmake ];
diff --git a/pkgs/development/lisp-modules/clwrapper/cl-wrapper.sh b/pkgs/development/lisp-modules/clwrapper/cl-wrapper.sh
index a1cfae0e6069..522d2c252684 100755
--- a/pkgs/development/lisp-modules/clwrapper/cl-wrapper.sh
+++ b/pkgs/development/lisp-modules/clwrapper/cl-wrapper.sh
@@ -1,4 +1,4 @@
-#!@stdenv_shell@
+#!@bash@/bin/bash
 # Part of NixPkgs package collection
 # This script can be used at your option under the same license as NixPkgs or
 # under MIT/X11 license
diff --git a/pkgs/development/lisp-modules/clwrapper/common-lisp.sh b/pkgs/development/lisp-modules/clwrapper/common-lisp.sh
index 9f5a2b806891..88948e3253df 100755
--- a/pkgs/development/lisp-modules/clwrapper/common-lisp.sh
+++ b/pkgs/development/lisp-modules/clwrapper/common-lisp.sh
@@ -1,3 +1,3 @@
-#! /bin/sh
+#!@bash@/bin/bash
 
 source "@out@"/bin/cl-wrapper.sh "${NIX_LISP_COMMAND:-$(@ls@ "@lisp@/bin"/* | @head@ -n 1)}" "$@"
diff --git a/pkgs/development/lisp-modules/clwrapper/default.nix b/pkgs/development/lisp-modules/clwrapper/default.nix
index fb4a090c702a..c834ab7a305b 100644
--- a/pkgs/development/lisp-modules/clwrapper/default.nix
+++ b/pkgs/development/lisp-modules/clwrapper/default.nix
@@ -1,4 +1,4 @@
-{stdenv, fetchurl, asdf, which, lisp ? null}:
+{stdenv, fetchurl, asdf, which, bash, lisp ? null}:
 stdenv.mkDerivation {
   name = "cl-wrapper-script";
 
@@ -36,7 +36,7 @@ stdenv.mkDerivation {
 
   buildInputs = [which];
 
-  inherit asdf lisp;
+  inherit asdf lisp bash;
   stdenv_shell = stdenv.shell;
 
   setupHook = ./setup-hook.sh;
diff --git a/pkgs/development/lisp-modules/lisp-packages.nix b/pkgs/development/lisp-modules/lisp-packages.nix
index d0731fc574ad..c63a9b3a054d 100644
--- a/pkgs/development/lisp-modules/lisp-packages.nix
+++ b/pkgs/development/lisp-modules/lisp-packages.nix
@@ -24,8 +24,8 @@ let lispPackages = rec {
       quicklispdist = pkgs.fetchurl {
         # Will usually be replaced with a fresh version anyway, but needs to be
         # a valid distinfo.txt
-        url = "http://beta.quicklisp.org/dist/quicklisp/2017-07-25/distinfo.txt";
-        sha256 = "165fd4a10zc3mxyy7wr4i2r3n6fzd1wd2hgzfyp32xlc41qj2ajf";
+        url = "http://beta.quicklisp.org/dist/quicklisp/2018-01-31/distinfo.txt";
+        sha256 = "0z28yz205cl8pa8lbflw9072mywg69jx0gf091rhx2wjjf9h14qy";
       };
       buildPhase = '' true; '';
       postInstall = ''
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/_3bmd.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/_3bmd.nix
index 6a40dda0c1cd..a5fddd417fa1 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/_3bmd.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/_3bmd.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''_3bmd'';
-  version = ''20161204-git'';
+  version = ''20171019-git'';
 
   description = ''markdown processor in CL using esrap parser.'';
 
   deps = [ args."alexandria" args."esrap" args."split-sequence" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/3bmd/2016-12-04/3bmd-20161204-git.tgz'';
-    sha256 = ''158rymq6ra9ipmkqrqmgr4ay5m46cdxxha03622svllhyf7xzypx'';
+    url = ''http://beta.quicklisp.org/archive/3bmd/2017-10-19/3bmd-20171019-git.tgz'';
+    sha256 = ''1lrh1ypn9wrjcayi9vc706knac1vsxlrzlsxq73apdc7jx4wzywz'';
   };
 
   packageName = "3bmd";
@@ -18,12 +18,12 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM 3bmd DESCRIPTION markdown processor in CL using esrap parser. SHA256
-    158rymq6ra9ipmkqrqmgr4ay5m46cdxxha03622svllhyf7xzypx URL
-    http://beta.quicklisp.org/archive/3bmd/2016-12-04/3bmd-20161204-git.tgz MD5
-    b80864c74437e0cfb66663e9bbf08fed NAME 3bmd FILENAME _3bmd DEPS
+    1lrh1ypn9wrjcayi9vc706knac1vsxlrzlsxq73apdc7jx4wzywz URL
+    http://beta.quicklisp.org/archive/3bmd/2017-10-19/3bmd-20171019-git.tgz MD5
+    d691962a511f2edc15f4fc228ecdf546 NAME 3bmd FILENAME _3bmd DEPS
     ((NAME alexandria FILENAME alexandria) (NAME esrap FILENAME esrap)
      (NAME split-sequence FILENAME split-sequence))
-    DEPENDENCIES (alexandria esrap split-sequence) VERSION 20161204-git
+    DEPENDENCIES (alexandria esrap split-sequence) VERSION 20171019-git
     SIBLINGS
     (3bmd-ext-code-blocks 3bmd-ext-definition-lists 3bmd-ext-tables
      3bmd-ext-wiki-links 3bmd-youtube-tests 3bmd-youtube)
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/alexandria.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/alexandria.nix
index 334ff7e82d65..9b9486e9758c 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/alexandria.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/alexandria.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''alexandria'';
-  version = ''20170630-git'';
+  version = ''20170830-git'';
 
   description = ''Alexandria is a collection of portable public domain utilities.'';
 
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/alexandria/2017-06-30/alexandria-20170630-git.tgz'';
-    sha256 = ''1ch7987ijs5gz5dk3i02bqgb2bn7s9p3sfsrwq4fp1sxykwr9fis'';
+    url = ''http://beta.quicklisp.org/archive/alexandria/2017-08-30/alexandria-20170830-git.tgz'';
+    sha256 = ''0vprl8kg5qahwp8zyc26bk0qpdynga9hbv5qnlvk3cclfpvm8kl9'';
   };
 
   packageName = "alexandria";
@@ -19,8 +19,8 @@ rec {
 }
 /* (SYSTEM alexandria DESCRIPTION
     Alexandria is a collection of portable public domain utilities. SHA256
-    1ch7987ijs5gz5dk3i02bqgb2bn7s9p3sfsrwq4fp1sxykwr9fis URL
-    http://beta.quicklisp.org/archive/alexandria/2017-06-30/alexandria-20170630-git.tgz
-    MD5 ce5427881c909981192f870cb52ff59f NAME alexandria FILENAME alexandria
-    DEPS NIL DEPENDENCIES NIL VERSION 20170630-git SIBLINGS (alexandria-tests)
+    0vprl8kg5qahwp8zyc26bk0qpdynga9hbv5qnlvk3cclfpvm8kl9 URL
+    http://beta.quicklisp.org/archive/alexandria/2017-08-30/alexandria-20170830-git.tgz
+    MD5 13ea5af7055094a87dec1e45090f894a NAME alexandria FILENAME alexandria
+    DEPS NIL DEPENDENCIES NIL VERSION 20170830-git SIBLINGS (alexandria-tests)
     PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/array-utils.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/array-utils.nix
index f7adf3b3494e..7c618a9fffb2 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/array-utils.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/array-utils.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''array-utils'';
-  version = ''20170630-git'';
+  version = ''20180131-git'';
 
   description = ''A few utilities for working with arrays.'';
 
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/array-utils/2017-06-30/array-utils-20170630-git.tgz'';
-    sha256 = ''1nj42w2q11qdg65cviaj514pcql1gi729mcsj5g2vy17pr298zgb'';
+    url = ''http://beta.quicklisp.org/archive/array-utils/2018-01-31/array-utils-20180131-git.tgz'';
+    sha256 = ''01vjb146lb1dp77xcpinq4r1jv2fvl3gzj50x9i04b5mhfaqpkd0'';
   };
 
   packageName = "array-utils";
@@ -18,8 +18,8 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM array-utils DESCRIPTION A few utilities for working with arrays.
-    SHA256 1nj42w2q11qdg65cviaj514pcql1gi729mcsj5g2vy17pr298zgb URL
-    http://beta.quicklisp.org/archive/array-utils/2017-06-30/array-utils-20170630-git.tgz
-    MD5 550b37bc0eccfafa889de00b59c422dc NAME array-utils FILENAME array-utils
-    DEPS NIL DEPENDENCIES NIL VERSION 20170630-git SIBLINGS (array-utils-test)
+    SHA256 01vjb146lb1dp77xcpinq4r1jv2fvl3gzj50x9i04b5mhfaqpkd0 URL
+    http://beta.quicklisp.org/archive/array-utils/2018-01-31/array-utils-20180131-git.tgz
+    MD5 339670a03dd7d865cd045a6556d705c6 NAME array-utils FILENAME array-utils
+    DEPS NIL DEPENDENCIES NIL VERSION 20180131-git SIBLINGS (array-utils-test)
     PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/babel-streams.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/babel-streams.nix
index e96c18a81209..4f438eb734a8 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/babel-streams.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/babel-streams.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''babel-streams'';
-  version = ''babel-20170630-git'';
+  version = ''babel-20171227-git'';
 
   description = ''Some useful streams based on Babel's encoding code'';
 
   deps = [ args."alexandria" args."babel" args."trivial-features" args."trivial-gray-streams" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/babel/2017-06-30/babel-20170630-git.tgz'';
-    sha256 = ''0w1jfzdklk5zz9vgplr2a0vc6gybrwl8wa72nj6xs4ihp7spf0lx'';
+    url = ''http://beta.quicklisp.org/archive/babel/2017-12-27/babel-20171227-git.tgz'';
+    sha256 = ''166y6j9ma1vxzy5bcwnbi37zwgn2zssx5x1q7zr63kyj2caiw2rf'';
   };
 
   packageName = "babel-streams";
@@ -19,12 +19,12 @@ rec {
 }
 /* (SYSTEM babel-streams DESCRIPTION
     Some useful streams based on Babel's encoding code SHA256
-    0w1jfzdklk5zz9vgplr2a0vc6gybrwl8wa72nj6xs4ihp7spf0lx URL
-    http://beta.quicklisp.org/archive/babel/2017-06-30/babel-20170630-git.tgz
-    MD5 aa7eff848b97bb7f7aa6bdb43a081964 NAME babel-streams FILENAME
+    166y6j9ma1vxzy5bcwnbi37zwgn2zssx5x1q7zr63kyj2caiw2rf URL
+    http://beta.quicklisp.org/archive/babel/2017-12-27/babel-20171227-git.tgz
+    MD5 8ea39f73873847907a8bb67f99f16ecd NAME babel-streams FILENAME
     babel-streams DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME trivial-features FILENAME trivial-features)
      (NAME trivial-gray-streams FILENAME trivial-gray-streams))
     DEPENDENCIES (alexandria babel trivial-features trivial-gray-streams)
-    VERSION babel-20170630-git SIBLINGS (babel-tests babel) PARASITES NIL) */
+    VERSION babel-20171227-git SIBLINGS (babel-tests babel) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/babel.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/babel.nix
index d5b31daa33ab..4cba3e86e068 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/babel.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/babel.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''babel'';
-  version = ''20170630-git'';
+  version = ''20171227-git'';
 
   description = ''Babel, a charset conversion library.'';
 
   deps = [ args."alexandria" args."trivial-features" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/babel/2017-06-30/babel-20170630-git.tgz'';
-    sha256 = ''0w1jfzdklk5zz9vgplr2a0vc6gybrwl8wa72nj6xs4ihp7spf0lx'';
+    url = ''http://beta.quicklisp.org/archive/babel/2017-12-27/babel-20171227-git.tgz'';
+    sha256 = ''166y6j9ma1vxzy5bcwnbi37zwgn2zssx5x1q7zr63kyj2caiw2rf'';
   };
 
   packageName = "babel";
@@ -18,10 +18,10 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM babel DESCRIPTION Babel, a charset conversion library. SHA256
-    0w1jfzdklk5zz9vgplr2a0vc6gybrwl8wa72nj6xs4ihp7spf0lx URL
-    http://beta.quicklisp.org/archive/babel/2017-06-30/babel-20170630-git.tgz
-    MD5 aa7eff848b97bb7f7aa6bdb43a081964 NAME babel FILENAME babel DEPS
+    166y6j9ma1vxzy5bcwnbi37zwgn2zssx5x1q7zr63kyj2caiw2rf URL
+    http://beta.quicklisp.org/archive/babel/2017-12-27/babel-20171227-git.tgz
+    MD5 8ea39f73873847907a8bb67f99f16ecd NAME babel FILENAME babel DEPS
     ((NAME alexandria FILENAME alexandria)
      (NAME trivial-features FILENAME trivial-features))
-    DEPENDENCIES (alexandria trivial-features) VERSION 20170630-git SIBLINGS
+    DEPENDENCIES (alexandria trivial-features) VERSION 20171227-git SIBLINGS
     (babel-streams babel-tests) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/caveman.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/caveman.nix
index 1c6dadb8fb41..e60f60a303bf 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/caveman.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/caveman.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''caveman'';
-  version = ''20170630-git'';
+  version = ''20171019-git'';
 
   description = ''Web Application Framework for Common Lisp'';
 
-  deps = [ args."anaphora" args."cl-emb" args."cl-ppcre" args."cl-project" args."cl-syntax" args."cl-syntax-annot" args."clack-v1-compat" args."do-urlencode" args."local-time" args."myway" ];
+  deps = [ args."alexandria" args."anaphora" args."babel" args."babel-streams" args."bordeaux-threads" args."circular-streams" args."cl-annot" args."cl-ansi-text" args."cl-colors" args."cl-emb" args."cl-fad" args."cl-ppcre" args."cl-project" args."cl-syntax" args."cl-syntax-annot" args."cl-utilities" args."clack-v1-compat" args."dexador" args."do-urlencode" args."http-body" args."lack" args."let-plus" args."local-time" args."map-set" args."marshal" args."myway" args."named-readtables" args."prove" args."quri" args."split-sequence" args."trivial-backtrace" args."trivial-features" args."trivial-gray-streams" args."trivial-types" args."usocket" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/caveman/2017-06-30/caveman-20170630-git.tgz'';
-    sha256 = ''0wpjnskcvrgvqn9gbr43yqnpcxfmdggbiyaxz9rrhgcis2rwjkj2'';
+    url = ''http://beta.quicklisp.org/archive/caveman/2017-10-19/caveman-20171019-git.tgz'';
+    sha256 = ''0yjhjhjnq7l6z4fj9l470hgsa609adm216fss5xsf43pljv2h5ra'';
   };
 
   packageName = "caveman";
@@ -18,20 +18,42 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM caveman DESCRIPTION Web Application Framework for Common Lisp SHA256
-    0wpjnskcvrgvqn9gbr43yqnpcxfmdggbiyaxz9rrhgcis2rwjkj2 URL
-    http://beta.quicklisp.org/archive/caveman/2017-06-30/caveman-20170630-git.tgz
-    MD5 774f85fa78792bde012bad78efff4b53 NAME caveman FILENAME caveman DEPS
-    ((NAME anaphora FILENAME anaphora) (NAME cl-emb FILENAME cl-emb)
-     (NAME cl-ppcre FILENAME cl-ppcre) (NAME cl-project FILENAME cl-project)
-     (NAME cl-syntax FILENAME cl-syntax)
+    0yjhjhjnq7l6z4fj9l470hgsa609adm216fss5xsf43pljv2h5ra URL
+    http://beta.quicklisp.org/archive/caveman/2017-10-19/caveman-20171019-git.tgz
+    MD5 41318d26a0825e504042fa693959feaf NAME caveman FILENAME caveman DEPS
+    ((NAME alexandria FILENAME alexandria) (NAME anaphora FILENAME anaphora)
+     (NAME babel FILENAME babel) (NAME babel-streams FILENAME babel-streams)
+     (NAME bordeaux-threads FILENAME bordeaux-threads)
+     (NAME circular-streams FILENAME circular-streams)
+     (NAME cl-annot FILENAME cl-annot)
+     (NAME cl-ansi-text FILENAME cl-ansi-text)
+     (NAME cl-colors FILENAME cl-colors) (NAME cl-emb FILENAME cl-emb)
+     (NAME cl-fad FILENAME cl-fad) (NAME cl-ppcre FILENAME cl-ppcre)
+     (NAME cl-project FILENAME cl-project) (NAME cl-syntax FILENAME cl-syntax)
      (NAME cl-syntax-annot FILENAME cl-syntax-annot)
+     (NAME cl-utilities FILENAME cl-utilities)
      (NAME clack-v1-compat FILENAME clack-v1-compat)
-     (NAME do-urlencode FILENAME do-urlencode)
-     (NAME local-time FILENAME local-time) (NAME myway FILENAME myway))
+     (NAME dexador FILENAME dexador) (NAME do-urlencode FILENAME do-urlencode)
+     (NAME http-body FILENAME http-body) (NAME lack FILENAME lack)
+     (NAME let-plus FILENAME let-plus) (NAME local-time FILENAME local-time)
+     (NAME map-set FILENAME map-set) (NAME marshal FILENAME marshal)
+     (NAME myway FILENAME myway)
+     (NAME named-readtables FILENAME named-readtables)
+     (NAME prove FILENAME prove) (NAME quri FILENAME quri)
+     (NAME split-sequence FILENAME split-sequence)
+     (NAME trivial-backtrace FILENAME trivial-backtrace)
+     (NAME trivial-features FILENAME trivial-features)
+     (NAME trivial-gray-streams FILENAME trivial-gray-streams)
+     (NAME trivial-types FILENAME trivial-types)
+     (NAME usocket FILENAME usocket))
     DEPENDENCIES
-    (anaphora cl-emb cl-ppcre cl-project cl-syntax cl-syntax-annot
-     clack-v1-compat do-urlencode local-time myway)
-    VERSION 20170630-git SIBLINGS
+    (alexandria anaphora babel babel-streams bordeaux-threads circular-streams
+     cl-annot cl-ansi-text cl-colors cl-emb cl-fad cl-ppcre cl-project
+     cl-syntax cl-syntax-annot cl-utilities clack-v1-compat dexador
+     do-urlencode http-body lack let-plus local-time map-set marshal myway
+     named-readtables prove quri split-sequence trivial-backtrace
+     trivial-features trivial-gray-streams trivial-types usocket)
+    VERSION 20171019-git SIBLINGS
     (caveman-middleware-dbimanager caveman-test caveman2-db caveman2-test
      caveman2)
     PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/chunga.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/chunga.nix
index 6a4fd0defb99..4a533220caf5 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/chunga.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/chunga.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''chunga'';
-  version = ''1.1.6'';
+  version = ''20180131-git'';
 
   description = '''';
 
   deps = [ args."trivial-gray-streams" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/chunga/2014-12-17/chunga-1.1.6.tgz'';
-    sha256 = ''1ivdfi9hjkzp2anhpjm58gzrjpn6mdsp35km115c1j1c4yhs9lzg'';
+    url = ''http://beta.quicklisp.org/archive/chunga/2018-01-31/chunga-20180131-git.tgz'';
+    sha256 = ''0crlv6n6al7j9b40dpfjd13870ih5hzwra29xxfg3zg2zy2kdnrq'';
   };
 
   packageName = "chunga";
@@ -18,8 +18,8 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM chunga DESCRIPTION NIL SHA256
-    1ivdfi9hjkzp2anhpjm58gzrjpn6mdsp35km115c1j1c4yhs9lzg URL
-    http://beta.quicklisp.org/archive/chunga/2014-12-17/chunga-1.1.6.tgz MD5
-    75f5c4f9dec3a8a181ed5ef7e5d700b5 NAME chunga FILENAME chunga DEPS
+    0crlv6n6al7j9b40dpfjd13870ih5hzwra29xxfg3zg2zy2kdnrq URL
+    http://beta.quicklisp.org/archive/chunga/2018-01-31/chunga-20180131-git.tgz
+    MD5 044b684535b11b1eee1cf939bec6e14a NAME chunga FILENAME chunga DEPS
     ((NAME trivial-gray-streams FILENAME trivial-gray-streams)) DEPENDENCIES
-    (trivial-gray-streams) VERSION 1.1.6 SIBLINGS NIL PARASITES NIL) */
+    (trivial-gray-streams) VERSION 20180131-git SIBLINGS NIL PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/circular-streams.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/circular-streams.nix
index b25e131be559..8d2254e4bdcb 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/circular-streams.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/circular-streams.nix
@@ -5,7 +5,7 @@ rec {
 
   description = ''Circularly readable streams for Common Lisp'';
 
-  deps = [ args."alexandria" args."fast-io" args."static-vectors" args."trivial-gray-streams" ];
+  deps = [ args."alexandria" args."babel" args."cffi" args."cffi-grovel" args."fast-io" args."static-vectors" args."trivial-features" args."trivial-gray-streams" ];
 
   src = fetchurl {
     url = ''http://beta.quicklisp.org/archive/circular-streams/2016-12-04/circular-streams-20161204-git.tgz'';
@@ -23,8 +23,13 @@ rec {
     http://beta.quicklisp.org/archive/circular-streams/2016-12-04/circular-streams-20161204-git.tgz
     MD5 2383f3b82fa3335d9106e1354a678db8 NAME circular-streams FILENAME
     circular-streams DEPS
-    ((NAME alexandria FILENAME alexandria) (NAME fast-io FILENAME fast-io)
+    ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
+     (NAME cffi FILENAME cffi) (NAME cffi-grovel FILENAME cffi-grovel)
+     (NAME fast-io FILENAME fast-io)
      (NAME static-vectors FILENAME static-vectors)
+     (NAME trivial-features FILENAME trivial-features)
      (NAME trivial-gray-streams FILENAME trivial-gray-streams))
-    DEPENDENCIES (alexandria fast-io static-vectors trivial-gray-streams)
+    DEPENDENCIES
+    (alexandria babel cffi cffi-grovel fast-io static-vectors trivial-features
+     trivial-gray-streams)
     VERSION 20161204-git SIBLINGS (circular-streams-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl+ssl.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl+ssl.nix
index 8a8a26a2e9bc..0243709f3fe1 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl+ssl.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl+ssl.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl+ssl'';
-  version = ''cl+ssl-20170725-git'';
+  version = ''cl+ssl-20171227-git'';
 
   parasites = [ "openssl-1.1.0" ];
 
@@ -10,8 +10,8 @@ rec {
   deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."flexi-streams" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."uiop" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl+ssl/2017-07-25/cl+ssl-20170725-git.tgz'';
-    sha256 = ''1p5886l5bwz4bj2xy8mpsjswg103b8saqdnw050a4wk9shpj1j69'';
+    url = ''http://beta.quicklisp.org/archive/cl+ssl/2017-12-27/cl+ssl-20171227-git.tgz'';
+    sha256 = ''1m6wcyccjyrz44mq0v1gvmpi44i9phknym5pimmicx3jvjyr37s4'';
   };
 
   packageName = "cl+ssl";
@@ -20,9 +20,9 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM cl+ssl DESCRIPTION Common Lisp interface to OpenSSL. SHA256
-    1p5886l5bwz4bj2xy8mpsjswg103b8saqdnw050a4wk9shpj1j69 URL
-    http://beta.quicklisp.org/archive/cl+ssl/2017-07-25/cl+ssl-20170725-git.tgz
-    MD5 3458c83f442395e0492c7e9b9720a1f2 NAME cl+ssl FILENAME cl+ssl DEPS
+    1m6wcyccjyrz44mq0v1gvmpi44i9phknym5pimmicx3jvjyr37s4 URL
+    http://beta.quicklisp.org/archive/cl+ssl/2017-12-27/cl+ssl-20171227-git.tgz
+    MD5 d00ce843db6038e6ff33d19668b5e038 NAME cl+ssl FILENAME cl+ssl DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
      (NAME cffi FILENAME cffi) (NAME flexi-streams FILENAME flexi-streams)
@@ -33,5 +33,5 @@ rec {
     DEPENDENCIES
     (alexandria babel bordeaux-threads cffi flexi-streams trivial-features
      trivial-garbage trivial-gray-streams uiop)
-    VERSION cl+ssl-20170725-git SIBLINGS (cl+ssl.test) PARASITES
+    VERSION cl+ssl-20171227-git SIBLINGS (cl+ssl.test) PARASITES
     (openssl-1.1.0)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-async-repl.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-async-repl.nix
index 8a323e3dcc96..9291be14e33a 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-async-repl.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-async-repl.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-async-repl'';
-  version = ''cl-async-20160825-git'';
+  version = ''cl-async-20171130-git'';
 
   description = ''REPL integration for CL-ASYNC.'';
 
   deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."cffi-grovel" args."cl-async" args."cl-async-base" args."cl-async-util" args."cl-libuv" args."cl-ppcre" args."fast-io" args."static-vectors" args."trivial-features" args."trivial-gray-streams" args."vom" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-async/2016-08-25/cl-async-20160825-git.tgz'';
-    sha256 = ''104x6vw9zrmzz3sipmzn0ygil6ccyy8gpvvjxak2bfxbmxcl09pa'';
+    url = ''http://beta.quicklisp.org/archive/cl-async/2017-11-30/cl-async-20171130-git.tgz'';
+    sha256 = ''0z3bxnzknb9dbisn9d0z1nw6qpswf8cn97v3mfrfq48q9hz11nvm'';
   };
 
   packageName = "cl-async-repl";
@@ -18,9 +18,9 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM cl-async-repl DESCRIPTION REPL integration for CL-ASYNC. SHA256
-    104x6vw9zrmzz3sipmzn0ygil6ccyy8gpvvjxak2bfxbmxcl09pa URL
-    http://beta.quicklisp.org/archive/cl-async/2016-08-25/cl-async-20160825-git.tgz
-    MD5 18e1d6c54a27c8ba721ebaa3d8c6e112 NAME cl-async-repl FILENAME
+    0z3bxnzknb9dbisn9d0z1nw6qpswf8cn97v3mfrfq48q9hz11nvm URL
+    http://beta.quicklisp.org/archive/cl-async/2017-11-30/cl-async-20171130-git.tgz
+    MD5 4e54a593f8c7f02a2c7f7e0e07247c05 NAME cl-async-repl FILENAME
     cl-async-repl DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
@@ -38,5 +38,5 @@ rec {
     (alexandria babel bordeaux-threads cffi cffi-grovel cl-async cl-async-base
      cl-async-util cl-libuv cl-ppcre fast-io static-vectors trivial-features
      trivial-gray-streams vom)
-    VERSION cl-async-20160825-git SIBLINGS
+    VERSION cl-async-20171130-git SIBLINGS
     (cl-async-ssl cl-async-test cl-async) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-async-ssl.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-async-ssl.nix
index 7c040c7a4616..4417d25be9f7 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-async-ssl.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-async-ssl.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-async-ssl'';
-  version = ''cl-async-20160825-git'';
+  version = ''cl-async-20171130-git'';
 
   description = ''SSL Wrapper around cl-async socket implementation.'';
 
   deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."cffi-grovel" args."cl-async" args."cl-async-base" args."cl-async-util" args."cl-libuv" args."cl-ppcre" args."fast-io" args."static-vectors" args."trivial-features" args."trivial-gray-streams" args."vom" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-async/2016-08-25/cl-async-20160825-git.tgz'';
-    sha256 = ''104x6vw9zrmzz3sipmzn0ygil6ccyy8gpvvjxak2bfxbmxcl09pa'';
+    url = ''http://beta.quicklisp.org/archive/cl-async/2017-11-30/cl-async-20171130-git.tgz'';
+    sha256 = ''0z3bxnzknb9dbisn9d0z1nw6qpswf8cn97v3mfrfq48q9hz11nvm'';
   };
 
   packageName = "cl-async-ssl";
@@ -19,9 +19,9 @@ rec {
 }
 /* (SYSTEM cl-async-ssl DESCRIPTION
     SSL Wrapper around cl-async socket implementation. SHA256
-    104x6vw9zrmzz3sipmzn0ygil6ccyy8gpvvjxak2bfxbmxcl09pa URL
-    http://beta.quicklisp.org/archive/cl-async/2016-08-25/cl-async-20160825-git.tgz
-    MD5 18e1d6c54a27c8ba721ebaa3d8c6e112 NAME cl-async-ssl FILENAME
+    0z3bxnzknb9dbisn9d0z1nw6qpswf8cn97v3mfrfq48q9hz11nvm URL
+    http://beta.quicklisp.org/archive/cl-async/2017-11-30/cl-async-20171130-git.tgz
+    MD5 4e54a593f8c7f02a2c7f7e0e07247c05 NAME cl-async-ssl FILENAME
     cl-async-ssl DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
@@ -39,5 +39,5 @@ rec {
     (alexandria babel bordeaux-threads cffi cffi-grovel cl-async cl-async-base
      cl-async-util cl-libuv cl-ppcre fast-io static-vectors trivial-features
      trivial-gray-streams vom)
-    VERSION cl-async-20160825-git SIBLINGS
+    VERSION cl-async-20171130-git SIBLINGS
     (cl-async-repl cl-async-test cl-async) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-async.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-async.nix
index cc31b7a186f8..6f62c9ff6b90 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-async.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-async.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-async'';
-  version = ''20160825-git'';
+  version = ''20171130-git'';
 
   parasites = [ "cl-async-base" "cl-async-util" ];
 
@@ -10,8 +10,8 @@ rec {
   deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."cffi-grovel" args."cl-libuv" args."cl-ppcre" args."fast-io" args."static-vectors" args."trivial-features" args."trivial-gray-streams" args."uiop" args."vom" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-async/2016-08-25/cl-async-20160825-git.tgz'';
-    sha256 = ''104x6vw9zrmzz3sipmzn0ygil6ccyy8gpvvjxak2bfxbmxcl09pa'';
+    url = ''http://beta.quicklisp.org/archive/cl-async/2017-11-30/cl-async-20171130-git.tgz'';
+    sha256 = ''0z3bxnzknb9dbisn9d0z1nw6qpswf8cn97v3mfrfq48q9hz11nvm'';
   };
 
   packageName = "cl-async";
@@ -20,9 +20,9 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM cl-async DESCRIPTION Asynchronous operations for Common Lisp. SHA256
-    104x6vw9zrmzz3sipmzn0ygil6ccyy8gpvvjxak2bfxbmxcl09pa URL
-    http://beta.quicklisp.org/archive/cl-async/2016-08-25/cl-async-20160825-git.tgz
-    MD5 18e1d6c54a27c8ba721ebaa3d8c6e112 NAME cl-async FILENAME cl-async DEPS
+    0z3bxnzknb9dbisn9d0z1nw6qpswf8cn97v3mfrfq48q9hz11nvm URL
+    http://beta.quicklisp.org/archive/cl-async/2017-11-30/cl-async-20171130-git.tgz
+    MD5 4e54a593f8c7f02a2c7f7e0e07247c05 NAME cl-async FILENAME cl-async DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
      (NAME cffi FILENAME cffi) (NAME cffi-grovel FILENAME cffi-grovel)
@@ -35,5 +35,5 @@ rec {
     DEPENDENCIES
     (alexandria babel bordeaux-threads cffi cffi-grovel cl-libuv cl-ppcre
      fast-io static-vectors trivial-features trivial-gray-streams uiop vom)
-    VERSION 20160825-git SIBLINGS (cl-async-repl cl-async-ssl cl-async-test)
+    VERSION 20171130-git SIBLINGS (cl-async-repl cl-async-ssl cl-async-test)
     PARASITES (cl-async-base cl-async-util)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-csv.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-csv.nix
index 3e1ef10ef993..82571660280a 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-csv.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-csv.nix
@@ -1,17 +1,17 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-csv'';
-  version = ''20170403-git'';
+  version = ''20180131-git'';
 
-  parasites = [ "cl-csv-test" ];
+  parasites = [ "cl-csv/test" ];
 
   description = ''Facilities for reading and writing CSV format files'';
 
   deps = [ args."alexandria" args."cl-interpol" args."cl-ppcre" args."cl-unicode" args."flexi-streams" args."iterate" args."lisp-unit2" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-csv/2017-04-03/cl-csv-20170403-git.tgz'';
-    sha256 = ''1mz0hr0r7yxw1dzdbaqzxabmipp286zc6aglni9f46isjwmqpy6h'';
+    url = ''http://beta.quicklisp.org/archive/cl-csv/2018-01-31/cl-csv-20180131-git.tgz'';
+    sha256 = ''0i912ch1mvms5iynmxrlxclzc325n3zsn3y9qdszh5lhpmw043wh'';
   };
 
   packageName = "cl-csv";
@@ -21,9 +21,9 @@ rec {
 }
 /* (SYSTEM cl-csv DESCRIPTION
     Facilities for reading and writing CSV format files SHA256
-    1mz0hr0r7yxw1dzdbaqzxabmipp286zc6aglni9f46isjwmqpy6h URL
-    http://beta.quicklisp.org/archive/cl-csv/2017-04-03/cl-csv-20170403-git.tgz
-    MD5 1e71a90c5057371fab044d440c39f0a3 NAME cl-csv FILENAME cl-csv DEPS
+    0i912ch1mvms5iynmxrlxclzc325n3zsn3y9qdszh5lhpmw043wh URL
+    http://beta.quicklisp.org/archive/cl-csv/2018-01-31/cl-csv-20180131-git.tgz
+    MD5 0be8956ee31e03436f8a2190387bad46 NAME cl-csv FILENAME cl-csv DEPS
     ((NAME alexandria FILENAME alexandria)
      (NAME cl-interpol FILENAME cl-interpol) (NAME cl-ppcre FILENAME cl-ppcre)
      (NAME cl-unicode FILENAME cl-unicode)
@@ -32,5 +32,5 @@ rec {
     DEPENDENCIES
     (alexandria cl-interpol cl-ppcre cl-unicode flexi-streams iterate
      lisp-unit2)
-    VERSION 20170403-git SIBLINGS (cl-csv-clsql cl-csv-data-table) PARASITES
-    (cl-csv-test)) */
+    VERSION 20180131-git SIBLINGS (cl-csv-clsql cl-csv-data-table) PARASITES
+    (cl-csv/test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-dbi.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-dbi.nix
index 4273869e62a4..d485d276bab7 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-dbi.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-dbi.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-dbi'';
-  version = ''20170725-git'';
+  version = ''20180131-git'';
 
   description = '''';
 
   deps = [ args."alexandria" args."bordeaux-threads" args."cl-annot" args."cl-syntax" args."cl-syntax-annot" args."closer-mop" args."dbi" args."named-readtables" args."split-sequence" args."trivial-types" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-dbi/2017-07-25/cl-dbi-20170725-git.tgz'';
-    sha256 = ''1gmd5y44nidqmxw7zk0mxl4mgl3mcjf1v05gjdslp3ginzznrqzl'';
+    url = ''http://beta.quicklisp.org/archive/cl-dbi/2018-01-31/cl-dbi-20180131-git.tgz'';
+    sha256 = ''0hz5na9aqfi3z78yhzz4dhf2zy3h0v639w41w8b1adffyqqf1vhn'';
   };
 
   packageName = "cl-dbi";
@@ -18,9 +18,9 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM cl-dbi DESCRIPTION NIL SHA256
-    1gmd5y44nidqmxw7zk0mxl4mgl3mcjf1v05gjdslp3ginzznrqzl URL
-    http://beta.quicklisp.org/archive/cl-dbi/2017-07-25/cl-dbi-20170725-git.tgz
-    MD5 a9fe67b7fea2640cea9708342a1347bd NAME cl-dbi FILENAME cl-dbi DEPS
+    0hz5na9aqfi3z78yhzz4dhf2zy3h0v639w41w8b1adffyqqf1vhn URL
+    http://beta.quicklisp.org/archive/cl-dbi/2018-01-31/cl-dbi-20180131-git.tgz
+    MD5 7dacf1c276fab38b952813795ff1f707 NAME cl-dbi FILENAME cl-dbi DEPS
     ((NAME alexandria FILENAME alexandria)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
      (NAME cl-annot FILENAME cl-annot) (NAME cl-syntax FILENAME cl-syntax)
@@ -32,5 +32,5 @@ rec {
     DEPENDENCIES
     (alexandria bordeaux-threads cl-annot cl-syntax cl-syntax-annot closer-mop
      dbi named-readtables split-sequence trivial-types)
-    VERSION 20170725-git SIBLINGS
+    VERSION 20180131-git SIBLINGS
     (dbd-mysql dbd-postgres dbd-sqlite3 dbi-test dbi) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-fad.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-fad.nix
index 25ad098f267f..0bc8488b2a8c 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-fad.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-fad.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-fad'';
-  version = ''0.7.4'';
+  version = ''20171227-git'';
 
   parasites = [ "cl-fad-test" ];
 
@@ -10,8 +10,8 @@ rec {
   deps = [ args."alexandria" args."bordeaux-threads" args."cl-ppcre" args."unit-test" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-fad/2016-08-25/cl-fad-0.7.4.tgz'';
-    sha256 = ''1avp5j66vrpv5symgw4n4szlc2cyqz4haa0cxzy1pl8p0a8k0v9x'';
+    url = ''http://beta.quicklisp.org/archive/cl-fad/2017-12-27/cl-fad-20171227-git.tgz'';
+    sha256 = ''0dl2c1klv55vk99j1b31f2s1rd1m9c94l1n0aly8spwxz3yd3za8'';
   };
 
   packageName = "cl-fad";
@@ -20,11 +20,11 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM cl-fad DESCRIPTION Portable pathname library SHA256
-    1avp5j66vrpv5symgw4n4szlc2cyqz4haa0cxzy1pl8p0a8k0v9x URL
-    http://beta.quicklisp.org/archive/cl-fad/2016-08-25/cl-fad-0.7.4.tgz MD5
-    8ee53f2249eca9d7d54e268662b41845 NAME cl-fad FILENAME cl-fad DEPS
+    0dl2c1klv55vk99j1b31f2s1rd1m9c94l1n0aly8spwxz3yd3za8 URL
+    http://beta.quicklisp.org/archive/cl-fad/2017-12-27/cl-fad-20171227-git.tgz
+    MD5 f6b34f61ebba1c68e8fe122bb7de3f77 NAME cl-fad FILENAME cl-fad DEPS
     ((NAME alexandria FILENAME alexandria)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
      (NAME cl-ppcre FILENAME cl-ppcre) (NAME unit-test FILENAME unit-test))
-    DEPENDENCIES (alexandria bordeaux-threads cl-ppcre unit-test) VERSION 0.7.4
-    SIBLINGS NIL PARASITES (cl-fad-test)) */
+    DEPENDENCIES (alexandria bordeaux-threads cl-ppcre unit-test) VERSION
+    20171227-git SIBLINGS NIL PARASITES (cl-fad-test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-html-parse.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-html-parse.nix
new file mode 100644
index 000000000000..61a35f2b58c6
--- /dev/null
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-html-parse.nix
@@ -0,0 +1,25 @@
+args @ { fetchurl, ... }:
+rec {
+  baseName = ''cl-html-parse'';
+  version = ''20161031-git'';
+
+  description = ''HTML Parser'';
+
+  deps = [ ];
+
+  src = fetchurl {
+    url = ''http://beta.quicklisp.org/archive/cl-html-parse/2016-10-31/cl-html-parse-20161031-git.tgz'';
+    sha256 = ''0i0nl630p9l6rqylydhfqrlqhl5sfq94a9wglx0dajk8gkkqjbnb'';
+  };
+
+  packageName = "cl-html-parse";
+
+  asdFilesToKeep = ["cl-html-parse.asd"];
+  overrides = x: x;
+}
+/* (SYSTEM cl-html-parse DESCRIPTION HTML Parser SHA256
+    0i0nl630p9l6rqylydhfqrlqhl5sfq94a9wglx0dajk8gkkqjbnb URL
+    http://beta.quicklisp.org/archive/cl-html-parse/2016-10-31/cl-html-parse-20161031-git.tgz
+    MD5 7fe933c461eaf2dd442da189d6827a72 NAME cl-html-parse FILENAME
+    cl-html-parse DEPS NIL DEPENDENCIES NIL VERSION 20161031-git SIBLINGS NIL
+    PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-interpol.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-interpol.nix
index 97c948507c49..d4ce8531291e 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-interpol.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-interpol.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-interpol'';
-  version = ''0.2.6'';
+  version = ''20171227-git'';
 
   parasites = [ "cl-interpol-test" ];
 
@@ -10,8 +10,8 @@ rec {
   deps = [ args."cl-ppcre" args."cl-unicode" args."flexi-streams" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-interpol/2016-09-29/cl-interpol-0.2.6.tgz'';
-    sha256 = ''172iy4bp4fxyfhz7n6jbqz4j8xqnzpvmh981bbi5waflg58x9h8b'';
+    url = ''http://beta.quicklisp.org/archive/cl-interpol/2017-12-27/cl-interpol-20171227-git.tgz'';
+    sha256 = ''1m4vxw8hskgqi0mnkm7qknwbnri2m69ab7qyd4kbpm2igsi02kzy'';
   };
 
   packageName = "cl-interpol";
@@ -20,11 +20,11 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM cl-interpol DESCRIPTION NIL SHA256
-    172iy4bp4fxyfhz7n6jbqz4j8xqnzpvmh981bbi5waflg58x9h8b URL
-    http://beta.quicklisp.org/archive/cl-interpol/2016-09-29/cl-interpol-0.2.6.tgz
-    MD5 1adc92924670601ebb92546ef8bdc6a7 NAME cl-interpol FILENAME cl-interpol
+    1m4vxw8hskgqi0mnkm7qknwbnri2m69ab7qyd4kbpm2igsi02kzy URL
+    http://beta.quicklisp.org/archive/cl-interpol/2017-12-27/cl-interpol-20171227-git.tgz
+    MD5 e9d2f0238bb8f7a0c5b1ef1e6ef390ae NAME cl-interpol FILENAME cl-interpol
     DEPS
     ((NAME cl-ppcre FILENAME cl-ppcre) (NAME cl-unicode FILENAME cl-unicode)
      (NAME flexi-streams FILENAME flexi-streams))
-    DEPENDENCIES (cl-ppcre cl-unicode flexi-streams) VERSION 0.2.6 SIBLINGS NIL
-    PARASITES (cl-interpol-test)) */
+    DEPENDENCIES (cl-ppcre cl-unicode flexi-streams) VERSION 20171227-git
+    SIBLINGS NIL PARASITES (cl-interpol-test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-mysql.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-mysql.nix
index fa4e18cdbfe9..1590f2536e34 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-mysql.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-mysql.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-mysql'';
-  version = ''20160628-git'';
+  version = ''20171019-git'';
 
   description = ''Common Lisp MySQL library bindings'';
 
   deps = [ args."alexandria" args."babel" args."cffi" args."trivial-features" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-mysql/2016-06-28/cl-mysql-20160628-git.tgz'';
-    sha256 = ''1zkijanw34nc91dn9jv30590ir6jw7bbcwjsqbvli69fh4b03319'';
+    url = ''http://beta.quicklisp.org/archive/cl-mysql/2017-10-19/cl-mysql-20171019-git.tgz'';
+    sha256 = ''1ga44gkwg6lm225gqpacpqpr6bpswszmw1ba9jhvjpjm09zinyc5'';
   };
 
   packageName = "cl-mysql";
@@ -18,11 +18,11 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM cl-mysql DESCRIPTION Common Lisp MySQL library bindings SHA256
-    1zkijanw34nc91dn9jv30590ir6jw7bbcwjsqbvli69fh4b03319 URL
-    http://beta.quicklisp.org/archive/cl-mysql/2016-06-28/cl-mysql-20160628-git.tgz
-    MD5 349615d041c2f2177b678088f9c22409 NAME cl-mysql FILENAME cl-mysql DEPS
+    1ga44gkwg6lm225gqpacpqpr6bpswszmw1ba9jhvjpjm09zinyc5 URL
+    http://beta.quicklisp.org/archive/cl-mysql/2017-10-19/cl-mysql-20171019-git.tgz
+    MD5 e1021da4d35cbb584d4df4f0d7e2bbb9 NAME cl-mysql FILENAME cl-mysql DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME cffi FILENAME cffi)
      (NAME trivial-features FILENAME trivial-features))
-    DEPENDENCIES (alexandria babel cffi trivial-features) VERSION 20160628-git
+    DEPENDENCIES (alexandria babel cffi trivial-features) VERSION 20171019-git
     SIBLINGS (cl-mysql-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-postgres.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-postgres.nix
index 485a2c3de22f..721dbf61aa92 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-postgres.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-postgres.nix
@@ -1,17 +1,17 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-postgres'';
-  version = ''postmodern-20170403-git'';
+  version = ''postmodern-20180131-git'';
 
-  parasites = [ "cl-postgres-tests" ];
+  parasites = [ "cl-postgres/simple-date-tests" "cl-postgres/tests" ];
 
   description = ''Low-level client library for PostgreSQL'';
 
-  deps = [ args."fiveam" args."md5" ];
+  deps = [ args."fiveam" args."md5" args."simple-date_slash_postgres-glue" args."split-sequence" args."usocket" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/postmodern/2017-04-03/postmodern-20170403-git.tgz'';
-    sha256 = ''1pklmp0y0falrmbxll79drrcrlgslasavdym5r45m8kkzi1zpv9p'';
+    url = ''http://beta.quicklisp.org/archive/postmodern/2018-01-31/postmodern-20180131-git.tgz'';
+    sha256 = ''0mz5pm759py1iscfn44c00dal2fijkyp5479fpx9l6i7wrdx2mki'';
   };
 
   packageName = "cl-postgres";
@@ -20,9 +20,14 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM cl-postgres DESCRIPTION Low-level client library for PostgreSQL
-    SHA256 1pklmp0y0falrmbxll79drrcrlgslasavdym5r45m8kkzi1zpv9p URL
-    http://beta.quicklisp.org/archive/postmodern/2017-04-03/postmodern-20170403-git.tgz
-    MD5 7a4145a0a5ff5bcb7a4bf29b5c2915d2 NAME cl-postgres FILENAME cl-postgres
-    DEPS ((NAME fiveam FILENAME fiveam) (NAME md5 FILENAME md5)) DEPENDENCIES
-    (fiveam md5) VERSION postmodern-20170403-git SIBLINGS
-    (postmodern s-sql simple-date) PARASITES (cl-postgres-tests)) */
+    SHA256 0mz5pm759py1iscfn44c00dal2fijkyp5479fpx9l6i7wrdx2mki URL
+    http://beta.quicklisp.org/archive/postmodern/2018-01-31/postmodern-20180131-git.tgz
+    MD5 a3b7bf25eb342cd49fe144fcd7ddcb16 NAME cl-postgres FILENAME cl-postgres
+    DEPS
+    ((NAME fiveam FILENAME fiveam) (NAME md5 FILENAME md5)
+     (NAME simple-date/postgres-glue FILENAME simple-date_slash_postgres-glue)
+     (NAME split-sequence FILENAME split-sequence)
+     (NAME usocket FILENAME usocket))
+    DEPENDENCIES (fiveam md5 simple-date/postgres-glue split-sequence usocket)
+    VERSION postmodern-20180131-git SIBLINGS (postmodern s-sql simple-date)
+    PARASITES (cl-postgres/simple-date-tests cl-postgres/tests)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-ppcre-template.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-ppcre-template.nix
index 92ede6007ef9..d2b3de9cae18 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-ppcre-template.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-ppcre-template.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-ppcre-template'';
-  version = ''cl-unification-20170630-git'';
+  version = ''cl-unification-20171227-git'';
 
   description = ''A system used to conditionally load the CL-PPCRE Template.
 
@@ -12,8 +12,8 @@ REGULAR-EXPRESSION-TEMPLATE.'';
   deps = [ args."cl-ppcre" args."cl-unification" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-unification/2017-06-30/cl-unification-20170630-git.tgz'';
-    sha256 = ''063xcf2ib3gdpjr39bgkaj6msylzdhbdjsj458w08iyidbxivwlz'';
+    url = ''http://beta.quicklisp.org/archive/cl-unification/2017-12-27/cl-unification-20171227-git.tgz'';
+    sha256 = ''0shwnvn5zf0iwgyqf3pa1b9cv2xghl7pss1ymrjgs95r6ijqxn2p'';
   };
 
   packageName = "cl-ppcre-template";
@@ -27,12 +27,12 @@ REGULAR-EXPRESSION-TEMPLATE.'';
 This system is not required and it is handled only if CL-PPCRE is
 available.  If it is, then the library provides the
 REGULAR-EXPRESSION-TEMPLATE.
-    SHA256 063xcf2ib3gdpjr39bgkaj6msylzdhbdjsj458w08iyidbxivwlz URL
-    http://beta.quicklisp.org/archive/cl-unification/2017-06-30/cl-unification-20170630-git.tgz
-    MD5 f6bf197ca8c79c935efe3a3c25953044 NAME cl-ppcre-template FILENAME
+    SHA256 0shwnvn5zf0iwgyqf3pa1b9cv2xghl7pss1ymrjgs95r6ijqxn2p URL
+    http://beta.quicklisp.org/archive/cl-unification/2017-12-27/cl-unification-20171227-git.tgz
+    MD5 45bfd18f8e15d16222e0f747992a6ce6 NAME cl-ppcre-template FILENAME
     cl-ppcre-template DEPS
     ((NAME cl-ppcre FILENAME cl-ppcre)
      (NAME cl-unification FILENAME cl-unification))
-    DEPENDENCIES (cl-ppcre cl-unification) VERSION cl-unification-20170630-git
+    DEPENDENCIES (cl-ppcre cl-unification) VERSION cl-unification-20171227-git
     SIBLINGS (cl-unification-lib cl-unification-test cl-unification) PARASITES
     NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-ppcre-unicode.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-ppcre-unicode.nix
index 5f2b2e37e30d..7853d5a279a2 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-ppcre-unicode.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-ppcre-unicode.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-ppcre-unicode'';
-  version = ''cl-ppcre-2.0.11'';
+  version = ''cl-ppcre-20171227-git'';
 
   parasites = [ "cl-ppcre-unicode-test" ];
 
@@ -10,8 +10,8 @@ rec {
   deps = [ args."cl-ppcre" args."cl-ppcre-test" args."cl-unicode" args."flexi-streams" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-ppcre/2015-09-23/cl-ppcre-2.0.11.tgz'';
-    sha256 = ''1djciws9n0jg3qdrck3j4wj607zvkbir8p379mp0p7b5g0glwvb2'';
+    url = ''http://beta.quicklisp.org/archive/cl-ppcre/2017-12-27/cl-ppcre-20171227-git.tgz'';
+    sha256 = ''0vdic9kxjslplafh6d00m7mab38hw09ps2sxxbg3adciwvspvmw4'';
   };
 
   packageName = "cl-ppcre-unicode";
@@ -21,13 +21,13 @@ rec {
 }
 /* (SYSTEM cl-ppcre-unicode DESCRIPTION
     Perl-compatible regular expression library (Unicode) SHA256
-    1djciws9n0jg3qdrck3j4wj607zvkbir8p379mp0p7b5g0glwvb2 URL
-    http://beta.quicklisp.org/archive/cl-ppcre/2015-09-23/cl-ppcre-2.0.11.tgz
-    MD5 6d5250467c05eb661a76d395186a1da0 NAME cl-ppcre-unicode FILENAME
+    0vdic9kxjslplafh6d00m7mab38hw09ps2sxxbg3adciwvspvmw4 URL
+    http://beta.quicklisp.org/archive/cl-ppcre/2017-12-27/cl-ppcre-20171227-git.tgz
+    MD5 9d8ce62ef1a71a5e1e144a31be698d8c NAME cl-ppcre-unicode FILENAME
     cl-ppcre-unicode DEPS
     ((NAME cl-ppcre FILENAME cl-ppcre)
      (NAME cl-ppcre-test FILENAME cl-ppcre-test)
      (NAME cl-unicode FILENAME cl-unicode)
      (NAME flexi-streams FILENAME flexi-streams))
     DEPENDENCIES (cl-ppcre cl-ppcre-test cl-unicode flexi-streams) VERSION
-    cl-ppcre-2.0.11 SIBLINGS (cl-ppcre) PARASITES (cl-ppcre-unicode-test)) */
+    cl-ppcre-20171227-git SIBLINGS (cl-ppcre) PARASITES (cl-ppcre-unicode-test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-ppcre.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-ppcre.nix
index 74d74a9b114c..cbdf3a471461 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-ppcre.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-ppcre.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-ppcre'';
-  version = ''2.0.11'';
+  version = ''20171227-git'';
 
   parasites = [ "cl-ppcre-test" ];
 
@@ -10,8 +10,8 @@ rec {
   deps = [ args."flexi-streams" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-ppcre/2015-09-23/cl-ppcre-2.0.11.tgz'';
-    sha256 = ''1djciws9n0jg3qdrck3j4wj607zvkbir8p379mp0p7b5g0glwvb2'';
+    url = ''http://beta.quicklisp.org/archive/cl-ppcre/2017-12-27/cl-ppcre-20171227-git.tgz'';
+    sha256 = ''0vdic9kxjslplafh6d00m7mab38hw09ps2sxxbg3adciwvspvmw4'';
   };
 
   packageName = "cl-ppcre";
@@ -20,8 +20,8 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM cl-ppcre DESCRIPTION Perl-compatible regular expression library
-    SHA256 1djciws9n0jg3qdrck3j4wj607zvkbir8p379mp0p7b5g0glwvb2 URL
-    http://beta.quicklisp.org/archive/cl-ppcre/2015-09-23/cl-ppcre-2.0.11.tgz
-    MD5 6d5250467c05eb661a76d395186a1da0 NAME cl-ppcre FILENAME cl-ppcre DEPS
+    SHA256 0vdic9kxjslplafh6d00m7mab38hw09ps2sxxbg3adciwvspvmw4 URL
+    http://beta.quicklisp.org/archive/cl-ppcre/2017-12-27/cl-ppcre-20171227-git.tgz
+    MD5 9d8ce62ef1a71a5e1e144a31be698d8c NAME cl-ppcre FILENAME cl-ppcre DEPS
     ((NAME flexi-streams FILENAME flexi-streams)) DEPENDENCIES (flexi-streams)
-    VERSION 2.0.11 SIBLINGS (cl-ppcre-unicode) PARASITES (cl-ppcre-test)) */
+    VERSION 20171227-git SIBLINGS (cl-ppcre-unicode) PARASITES (cl-ppcre-test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-project.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-project.nix
index bfaaabfbc2d7..658ffdb51b82 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-project.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-project.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-project'';
-  version = ''20160531-git'';
+  version = ''20171019-git'';
 
   description = ''Generate a skeleton for modern project'';
 
   deps = [ args."alexandria" args."anaphora" args."bordeaux-threads" args."cl-ansi-text" args."cl-colors" args."cl-emb" args."cl-fad" args."cl-ppcre" args."let-plus" args."local-time" args."prove" args."uiop" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-project/2016-05-31/cl-project-20160531-git.tgz'';
-    sha256 = ''1xwjgs5pzkdnd9i5lcic9z41d1c4yf7pvarrvawfxcicg6rrfw81'';
+    url = ''http://beta.quicklisp.org/archive/cl-project/2017-10-19/cl-project-20171019-git.tgz'';
+    sha256 = ''1phgpik46dvqxnd49kccy4fh653659qd86hv7km50m07nzm8fn7q'';
   };
 
   packageName = "cl-project";
@@ -18,9 +18,9 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM cl-project DESCRIPTION Generate a skeleton for modern project SHA256
-    1xwjgs5pzkdnd9i5lcic9z41d1c4yf7pvarrvawfxcicg6rrfw81 URL
-    http://beta.quicklisp.org/archive/cl-project/2016-05-31/cl-project-20160531-git.tgz
-    MD5 63de5ce6f0f3e5f60094a86d32c2f1a9 NAME cl-project FILENAME cl-project
+    1phgpik46dvqxnd49kccy4fh653659qd86hv7km50m07nzm8fn7q URL
+    http://beta.quicklisp.org/archive/cl-project/2017-10-19/cl-project-20171019-git.tgz
+    MD5 9dbfd7f9b0a83ca608031ebf32185a0f NAME cl-project FILENAME cl-project
     DEPS
     ((NAME alexandria FILENAME alexandria) (NAME anaphora FILENAME anaphora)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
@@ -32,4 +32,4 @@ rec {
     DEPENDENCIES
     (alexandria anaphora bordeaux-threads cl-ansi-text cl-colors cl-emb cl-fad
      cl-ppcre let-plus local-time prove uiop)
-    VERSION 20160531-git SIBLINGS (cl-project-test) PARASITES NIL) */
+    VERSION 20171019-git SIBLINGS (cl-project-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-smtp.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-smtp.nix
index 9cb69caaafd5..572e3eb4cb38 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-smtp.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-smtp.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-smtp'';
-  version = ''20160825-git'';
+  version = ''20180131-git'';
 
   description = ''Common Lisp smtp client.'';
 
   deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."cl+ssl" args."cl-base64" args."flexi-streams" args."split-sequence" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."usocket" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-smtp/2016-08-25/cl-smtp-20160825-git.tgz'';
-    sha256 = ''0svkvy6x458a7rgvp3wki0lmhdxpaa1j0brwsw2mlpl2jqkx5dxh'';
+    url = ''http://beta.quicklisp.org/archive/cl-smtp/2018-01-31/cl-smtp-20180131-git.tgz'';
+    sha256 = ''0sjjynnynxmfxdfpvzl3jj1jz0dhj0bx4bv63q1icm2p9xzfzb61'';
   };
 
   packageName = "cl-smtp";
@@ -18,9 +18,9 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM cl-smtp DESCRIPTION Common Lisp smtp client. SHA256
-    0svkvy6x458a7rgvp3wki0lmhdxpaa1j0brwsw2mlpl2jqkx5dxh URL
-    http://beta.quicklisp.org/archive/cl-smtp/2016-08-25/cl-smtp-20160825-git.tgz
-    MD5 e6bb60e66b0f7d9cc5e4f98aba56998a NAME cl-smtp FILENAME cl-smtp DEPS
+    0sjjynnynxmfxdfpvzl3jj1jz0dhj0bx4bv63q1icm2p9xzfzb61 URL
+    http://beta.quicklisp.org/archive/cl-smtp/2018-01-31/cl-smtp-20180131-git.tgz
+    MD5 0ce08f067f145ab4c7528f806f0b51ff NAME cl-smtp FILENAME cl-smtp DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
      (NAME cffi FILENAME cffi) (NAME cl+ssl FILENAME cl+ssl)
@@ -35,4 +35,4 @@ rec {
     (alexandria babel bordeaux-threads cffi cl+ssl cl-base64 flexi-streams
      split-sequence trivial-features trivial-garbage trivial-gray-streams
      usocket)
-    VERSION 20160825-git SIBLINGS NIL PARASITES NIL) */
+    VERSION 20180131-git SIBLINGS NIL PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-test-more.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-test-more.nix
index 7425b7ce0a81..968f2972abfc 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-test-more.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-test-more.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-test-more'';
-  version = ''prove-20170403-git'';
+  version = ''prove-20171130-git'';
 
   description = '''';
 
   deps = [ args."alexandria" args."anaphora" args."cl-ansi-text" args."cl-colors" args."cl-ppcre" args."let-plus" args."prove" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/prove/2017-04-03/prove-20170403-git.tgz'';
-    sha256 = ''091xxkn9zj22c4gmm8x714k29bs4j0j7akppwh55zjsmrxdhqcpl'';
+    url = ''http://beta.quicklisp.org/archive/prove/2017-11-30/prove-20171130-git.tgz'';
+    sha256 = ''13dmnnlk3r9fxxcvk6sqq8m0ifv9y80zgp1wg63nv1ykwdi7kyar'';
   };
 
   packageName = "cl-test-more";
@@ -18,9 +18,9 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM cl-test-more DESCRIPTION NIL SHA256
-    091xxkn9zj22c4gmm8x714k29bs4j0j7akppwh55zjsmrxdhqcpl URL
-    http://beta.quicklisp.org/archive/prove/2017-04-03/prove-20170403-git.tgz
-    MD5 063b615692c8711d2392204ecf1b37b7 NAME cl-test-more FILENAME
+    13dmnnlk3r9fxxcvk6sqq8m0ifv9y80zgp1wg63nv1ykwdi7kyar URL
+    http://beta.quicklisp.org/archive/prove/2017-11-30/prove-20171130-git.tgz
+    MD5 630df4367537f799570be40242f8ed52 NAME cl-test-more FILENAME
     cl-test-more DEPS
     ((NAME alexandria FILENAME alexandria) (NAME anaphora FILENAME anaphora)
      (NAME cl-ansi-text FILENAME cl-ansi-text)
@@ -28,5 +28,5 @@ rec {
      (NAME let-plus FILENAME let-plus) (NAME prove FILENAME prove))
     DEPENDENCIES
     (alexandria anaphora cl-ansi-text cl-colors cl-ppcre let-plus prove)
-    VERSION prove-20170403-git SIBLINGS (prove-asdf prove-test prove) PARASITES
+    VERSION prove-20171130-git SIBLINGS (prove-asdf prove-test prove) PARASITES
     NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-unicode.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-unicode.nix
index e35645f6e98e..25dfbbcae5f7 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-unicode.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-unicode.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-unicode'';
-  version = ''0.1.5'';
+  version = ''20180131-git'';
 
   parasites = [ "cl-unicode/base" "cl-unicode/build" "cl-unicode/test" ];
 
@@ -10,8 +10,8 @@ rec {
   deps = [ args."cl-ppcre" args."flexi-streams" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-unicode/2014-12-17/cl-unicode-0.1.5.tgz'';
-    sha256 = ''1jd5qq5ji6l749c4x415z22y9r0k9z18pdi9p9fqvamzh854i46n'';
+    url = ''http://beta.quicklisp.org/archive/cl-unicode/2018-01-31/cl-unicode-20180131-git.tgz'';
+    sha256 = ''113hsx22pw4ydwzkyr9y7l8a8jq3nkhwazs03wj3mh2dczwv28xa'';
   };
 
   packageName = "cl-unicode";
@@ -20,11 +20,11 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM cl-unicode DESCRIPTION Portable Unicode Library SHA256
-    1jd5qq5ji6l749c4x415z22y9r0k9z18pdi9p9fqvamzh854i46n URL
-    http://beta.quicklisp.org/archive/cl-unicode/2014-12-17/cl-unicode-0.1.5.tgz
-    MD5 2fd456537bd670126da84466226bc5c5 NAME cl-unicode FILENAME cl-unicode
+    113hsx22pw4ydwzkyr9y7l8a8jq3nkhwazs03wj3mh2dczwv28xa URL
+    http://beta.quicklisp.org/archive/cl-unicode/2018-01-31/cl-unicode-20180131-git.tgz
+    MD5 653ba12d595599b32aa2a8c7c8b65c28 NAME cl-unicode FILENAME cl-unicode
     DEPS
     ((NAME cl-ppcre FILENAME cl-ppcre)
      (NAME flexi-streams FILENAME flexi-streams))
-    DEPENDENCIES (cl-ppcre flexi-streams) VERSION 0.1.5 SIBLINGS NIL PARASITES
-    (cl-unicode/base cl-unicode/build cl-unicode/test)) */
+    DEPENDENCIES (cl-ppcre flexi-streams) VERSION 20180131-git SIBLINGS NIL
+    PARASITES (cl-unicode/base cl-unicode/build cl-unicode/test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-unification.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-unification.nix
index 39f3fccb7a7e..6d284b7b0120 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-unification.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-unification.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-unification'';
-  version = ''20170630-git'';
+  version = ''20171227-git'';
 
   description = ''The CL-UNIFICATION system.
 
@@ -10,8 +10,8 @@ The system contains the definitions for the 'unification' machinery.'';
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-unification/2017-06-30/cl-unification-20170630-git.tgz'';
-    sha256 = ''063xcf2ib3gdpjr39bgkaj6msylzdhbdjsj458w08iyidbxivwlz'';
+    url = ''http://beta.quicklisp.org/archive/cl-unification/2017-12-27/cl-unification-20171227-git.tgz'';
+    sha256 = ''0shwnvn5zf0iwgyqf3pa1b9cv2xghl7pss1ymrjgs95r6ijqxn2p'';
   };
 
   packageName = "cl-unification";
@@ -22,8 +22,8 @@ The system contains the definitions for the 'unification' machinery.'';
 /* (SYSTEM cl-unification DESCRIPTION The CL-UNIFICATION system.
 
 The system contains the definitions for the 'unification' machinery.
-    SHA256 063xcf2ib3gdpjr39bgkaj6msylzdhbdjsj458w08iyidbxivwlz URL
-    http://beta.quicklisp.org/archive/cl-unification/2017-06-30/cl-unification-20170630-git.tgz
-    MD5 f6bf197ca8c79c935efe3a3c25953044 NAME cl-unification FILENAME
-    cl-unification DEPS NIL DEPENDENCIES NIL VERSION 20170630-git SIBLINGS
+    SHA256 0shwnvn5zf0iwgyqf3pa1b9cv2xghl7pss1ymrjgs95r6ijqxn2p URL
+    http://beta.quicklisp.org/archive/cl-unification/2017-12-27/cl-unification-20171227-git.tgz
+    MD5 45bfd18f8e15d16222e0f747992a6ce6 NAME cl-unification FILENAME
+    cl-unification DEPS NIL DEPENDENCIES NIL VERSION 20171227-git SIBLINGS
     (cl-unification-lib cl-unification-test cl-ppcre-template) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-who.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-who.nix
index 32304139c515..575e05aa074d 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-who.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/cl-who.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''cl-who'';
-  version = ''1.1.4'';
+  version = ''20171130-git'';
 
   parasites = [ "cl-who-test" ];
 
@@ -10,8 +10,8 @@ rec {
   deps = [ args."flexi-streams" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-who/2014-12-17/cl-who-1.1.4.tgz'';
-    sha256 = ''0r9wc92njz1cc7nghgbhdmd7jy216ylhlabfj0vc45bmfa4w44rq'';
+    url = ''http://beta.quicklisp.org/archive/cl-who/2017-11-30/cl-who-20171130-git.tgz'';
+    sha256 = ''1941kwnvqnqr81vjkv8fcpc16abz7hrrmz18xwxxprsi6wifzjzw'';
   };
 
   packageName = "cl-who";
@@ -20,8 +20,8 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM cl-who DESCRIPTION (X)HTML generation macros SHA256
-    0r9wc92njz1cc7nghgbhdmd7jy216ylhlabfj0vc45bmfa4w44rq URL
-    http://beta.quicklisp.org/archive/cl-who/2014-12-17/cl-who-1.1.4.tgz MD5
-    a9e6f0b6a8aaa247dbf751de2cb550bf NAME cl-who FILENAME cl-who DEPS
+    1941kwnvqnqr81vjkv8fcpc16abz7hrrmz18xwxxprsi6wifzjzw URL
+    http://beta.quicklisp.org/archive/cl-who/2017-11-30/cl-who-20171130-git.tgz
+    MD5 257a670166ff9d24d1570f44be0c7171 NAME cl-who FILENAME cl-who DEPS
     ((NAME flexi-streams FILENAME flexi-streams)) DEPENDENCIES (flexi-streams)
-    VERSION 1.1.4 SIBLINGS NIL PARASITES (cl-who-test)) */
+    VERSION 20171130-git SIBLINGS NIL PARASITES (cl-who-test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/closer-mop.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/closer-mop.nix
index 3c15d7cf7539..3ecc0e101498 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/closer-mop.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/closer-mop.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''closer-mop'';
-  version = ''20170725-git'';
+  version = ''20180131-git'';
 
   description = ''Closer to MOP is a compatibility layer that rectifies many of the absent or incorrect CLOS MOP features across a broad range of Common Lisp implementations.'';
 
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/closer-mop/2017-07-25/closer-mop-20170725-git.tgz'';
-    sha256 = ''0qc4zh4zicv3zm4bw8c3s2r2bjbx2bp31j69lwiz1mdl9xg0nhsc'';
+    url = ''http://beta.quicklisp.org/archive/closer-mop/2018-01-31/closer-mop-20180131-git.tgz'';
+    sha256 = ''0lsfpxppbd8j4ayfrhd723ck367yb4amdywwaqj9yivh00zn4r6s'';
   };
 
   packageName = "closer-mop";
@@ -19,7 +19,7 @@ rec {
 }
 /* (SYSTEM closer-mop DESCRIPTION
     Closer to MOP is a compatibility layer that rectifies many of the absent or incorrect CLOS MOP features across a broad range of Common Lisp implementations.
-    SHA256 0qc4zh4zicv3zm4bw8c3s2r2bjbx2bp31j69lwiz1mdl9xg0nhsc URL
-    http://beta.quicklisp.org/archive/closer-mop/2017-07-25/closer-mop-20170725-git.tgz
-    MD5 308f9e8e4ea4573c7b6820055b6f171d NAME closer-mop FILENAME closer-mop
-    DEPS NIL DEPENDENCIES NIL VERSION 20170725-git SIBLINGS NIL PARASITES NIL) */
+    SHA256 0lsfpxppbd8j4ayfrhd723ck367yb4amdywwaqj9yivh00zn4r6s URL
+    http://beta.quicklisp.org/archive/closer-mop/2018-01-31/closer-mop-20180131-git.tgz
+    MD5 d572109e102869d89f206a46619c2ed0 NAME closer-mop FILENAME closer-mop
+    DEPS NIL DEPENDENCIES NIL VERSION 20180131-git SIBLINGS NIL PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/closure-html.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/closure-html.nix
new file mode 100644
index 000000000000..29c90369244a
--- /dev/null
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/closure-html.nix
@@ -0,0 +1,33 @@
+args @ { fetchurl, ... }:
+rec {
+  baseName = ''closure-html'';
+  version = ''20140826-git'';
+
+  description = '''';
+
+  deps = [ args."alexandria" args."babel" args."closure-common" args."flexi-streams" args."trivial-features" args."trivial-gray-streams" ];
+
+  src = fetchurl {
+    url = ''http://beta.quicklisp.org/archive/closure-html/2014-08-26/closure-html-20140826-git.tgz'';
+    sha256 = ''1m07iv9r5ykj52fszwhwai5wv39mczk3m4zzh24gjhsprv35x8qb'';
+  };
+
+  packageName = "closure-html";
+
+  asdFilesToKeep = ["closure-html.asd"];
+  overrides = x: x;
+}
+/* (SYSTEM closure-html DESCRIPTION NIL SHA256
+    1m07iv9r5ykj52fszwhwai5wv39mczk3m4zzh24gjhsprv35x8qb URL
+    http://beta.quicklisp.org/archive/closure-html/2014-08-26/closure-html-20140826-git.tgz
+    MD5 3f8d8a4fd54f915ca6cc5fdf29239d98 NAME closure-html FILENAME
+    closure-html DEPS
+    ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
+     (NAME closure-common FILENAME closure-common)
+     (NAME flexi-streams FILENAME flexi-streams)
+     (NAME trivial-features FILENAME trivial-features)
+     (NAME trivial-gray-streams FILENAME trivial-gray-streams))
+    DEPENDENCIES
+    (alexandria babel closure-common flexi-streams trivial-features
+     trivial-gray-streams)
+    VERSION 20140826-git SIBLINGS NIL PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/clss.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/clss.nix
index 11e723e0029c..76f50463a6ae 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/clss.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/clss.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''clss'';
-  version = ''20170630-git'';
+  version = ''20180131-git'';
 
   description = ''A DOM tree searching engine based on CSS selectors.'';
 
-  deps = [ args."array-utils" args."plump" ];
+  deps = [ args."array-utils" args."documentation-utils" args."plump" args."trivial-indent" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/clss/2017-06-30/clss-20170630-git.tgz'';
-    sha256 = ''0kdkzx7z997lzbf331p4fkqhri0ind7agknl9y992x917m9y4rn0'';
+    url = ''http://beta.quicklisp.org/archive/clss/2018-01-31/clss-20180131-git.tgz'';
+    sha256 = ''0d4sblafhm5syjkv89h45i98dykpznb0ga3q9a2cxlvl98yklg8r'';
   };
 
   packageName = "clss";
@@ -18,9 +18,11 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM clss DESCRIPTION A DOM tree searching engine based on CSS selectors.
-    SHA256 0kdkzx7z997lzbf331p4fkqhri0ind7agknl9y992x917m9y4rn0 URL
-    http://beta.quicklisp.org/archive/clss/2017-06-30/clss-20170630-git.tgz MD5
-    61bbadf22391940813bfc66dfd59d304 NAME clss FILENAME clss DEPS
-    ((NAME array-utils FILENAME array-utils) (NAME plump FILENAME plump))
-    DEPENDENCIES (array-utils plump) VERSION 20170630-git SIBLINGS NIL
-    PARASITES NIL) */
+    SHA256 0d4sblafhm5syjkv89h45i98dykpznb0ga3q9a2cxlvl98yklg8r URL
+    http://beta.quicklisp.org/archive/clss/2018-01-31/clss-20180131-git.tgz MD5
+    138244b7871d8ea832832aa9cc5867e6 NAME clss FILENAME clss DEPS
+    ((NAME array-utils FILENAME array-utils)
+     (NAME documentation-utils FILENAME documentation-utils)
+     (NAME plump FILENAME plump) (NAME trivial-indent FILENAME trivial-indent))
+    DEPENDENCIES (array-utils documentation-utils plump trivial-indent) VERSION
+    20180131-git SIBLINGS NIL PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/clx.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/clx.nix
index 2d802d3e4880..2a7ec984e7fb 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/clx.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/clx.nix
@@ -1,15 +1,17 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''clx'';
-  version = ''20170630-git'';
+  version = ''20171227-git'';
+
+  parasites = [ "clx/test" ];
 
   description = ''An implementation of the X Window System protocol in Lisp.'';
 
-  deps = [ ];
+  deps = [ args."fiasco" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/clx/2017-06-30/clx-20170630-git.tgz'';
-    sha256 = ''0di8h3galjylgmy30qqwa4q8mb5505rcag0y4ia7mv7sls51jbp7'';
+    url = ''http://beta.quicklisp.org/archive/clx/2017-12-27/clx-20171227-git.tgz'';
+    sha256 = ''159kwwilyvaffjdz7sbwwd4cncfa8kxndc7n3adml9ivbvaz2wri'';
   };
 
   packageName = "clx";
@@ -19,7 +21,8 @@ rec {
 }
 /* (SYSTEM clx DESCRIPTION
     An implementation of the X Window System protocol in Lisp. SHA256
-    0di8h3galjylgmy30qqwa4q8mb5505rcag0y4ia7mv7sls51jbp7 URL
-    http://beta.quicklisp.org/archive/clx/2017-06-30/clx-20170630-git.tgz MD5
-    ccfec3f35979df3bead0b73adc1d798a NAME clx FILENAME clx DEPS NIL
-    DEPENDENCIES NIL VERSION 20170630-git SIBLINGS NIL PARASITES NIL) */
+    159kwwilyvaffjdz7sbwwd4cncfa8kxndc7n3adml9ivbvaz2wri URL
+    http://beta.quicklisp.org/archive/clx/2017-12-27/clx-20171227-git.tgz MD5
+    40642f49e26b88859376efe2e5330a24 NAME clx FILENAME clx DEPS
+    ((NAME fiasco FILENAME fiasco)) DEPENDENCIES (fiasco) VERSION 20171227-git
+    SIBLINGS NIL PARASITES (clx/test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbd-mysql.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbd-mysql.nix
index 80a936560d15..52444db0e798 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbd-mysql.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbd-mysql.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''dbd-mysql'';
-  version = ''cl-dbi-20170725-git'';
+  version = ''cl-dbi-20180131-git'';
 
   description = ''Database driver for MySQL.'';
 
   deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."cl-annot" args."cl-mysql" args."cl-syntax" args."cl-syntax-annot" args."closer-mop" args."dbi" args."named-readtables" args."split-sequence" args."trivial-features" args."trivial-types" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-dbi/2017-07-25/cl-dbi-20170725-git.tgz'';
-    sha256 = ''1gmd5y44nidqmxw7zk0mxl4mgl3mcjf1v05gjdslp3ginzznrqzl'';
+    url = ''http://beta.quicklisp.org/archive/cl-dbi/2018-01-31/cl-dbi-20180131-git.tgz'';
+    sha256 = ''0hz5na9aqfi3z78yhzz4dhf2zy3h0v639w41w8b1adffyqqf1vhn'';
   };
 
   packageName = "dbd-mysql";
@@ -18,9 +18,9 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM dbd-mysql DESCRIPTION Database driver for MySQL. SHA256
-    1gmd5y44nidqmxw7zk0mxl4mgl3mcjf1v05gjdslp3ginzznrqzl URL
-    http://beta.quicklisp.org/archive/cl-dbi/2017-07-25/cl-dbi-20170725-git.tgz
-    MD5 a9fe67b7fea2640cea9708342a1347bd NAME dbd-mysql FILENAME dbd-mysql DEPS
+    0hz5na9aqfi3z78yhzz4dhf2zy3h0v639w41w8b1adffyqqf1vhn URL
+    http://beta.quicklisp.org/archive/cl-dbi/2018-01-31/cl-dbi-20180131-git.tgz
+    MD5 7dacf1c276fab38b952813795ff1f707 NAME dbd-mysql FILENAME dbd-mysql DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
      (NAME cffi FILENAME cffi) (NAME cl-annot FILENAME cl-annot)
@@ -35,5 +35,5 @@ rec {
     (alexandria babel bordeaux-threads cffi cl-annot cl-mysql cl-syntax
      cl-syntax-annot closer-mop dbi named-readtables split-sequence
      trivial-features trivial-types)
-    VERSION cl-dbi-20170725-git SIBLINGS
+    VERSION cl-dbi-20180131-git SIBLINGS
     (cl-dbi dbd-postgres dbd-sqlite3 dbi-test dbi) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbd-postgres.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbd-postgres.nix
index 1f7a784a5e6f..4dc4683ff9a0 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbd-postgres.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbd-postgres.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''dbd-postgres'';
-  version = ''cl-dbi-20170725-git'';
+  version = ''cl-dbi-20180131-git'';
 
   description = ''Database driver for PostgreSQL.'';
 
-  deps = [ args."alexandria" args."bordeaux-threads" args."cl-annot" args."cl-postgres" args."cl-syntax" args."cl-syntax-annot" args."closer-mop" args."dbi" args."md5" args."named-readtables" args."split-sequence" args."trivial-garbage" args."trivial-types" ];
+  deps = [ args."alexandria" args."bordeaux-threads" args."cl-annot" args."cl-postgres" args."cl-syntax" args."cl-syntax-annot" args."closer-mop" args."dbi" args."md5" args."named-readtables" args."split-sequence" args."trivial-garbage" args."trivial-types" args."usocket" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-dbi/2017-07-25/cl-dbi-20170725-git.tgz'';
-    sha256 = ''1gmd5y44nidqmxw7zk0mxl4mgl3mcjf1v05gjdslp3ginzznrqzl'';
+    url = ''http://beta.quicklisp.org/archive/cl-dbi/2018-01-31/cl-dbi-20180131-git.tgz'';
+    sha256 = ''0hz5na9aqfi3z78yhzz4dhf2zy3h0v639w41w8b1adffyqqf1vhn'';
   };
 
   packageName = "dbd-postgres";
@@ -18,9 +18,9 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM dbd-postgres DESCRIPTION Database driver for PostgreSQL. SHA256
-    1gmd5y44nidqmxw7zk0mxl4mgl3mcjf1v05gjdslp3ginzznrqzl URL
-    http://beta.quicklisp.org/archive/cl-dbi/2017-07-25/cl-dbi-20170725-git.tgz
-    MD5 a9fe67b7fea2640cea9708342a1347bd NAME dbd-postgres FILENAME
+    0hz5na9aqfi3z78yhzz4dhf2zy3h0v639w41w8b1adffyqqf1vhn URL
+    http://beta.quicklisp.org/archive/cl-dbi/2018-01-31/cl-dbi-20180131-git.tgz
+    MD5 7dacf1c276fab38b952813795ff1f707 NAME dbd-postgres FILENAME
     dbd-postgres DEPS
     ((NAME alexandria FILENAME alexandria)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
@@ -31,10 +31,11 @@ rec {
      (NAME md5 FILENAME md5) (NAME named-readtables FILENAME named-readtables)
      (NAME split-sequence FILENAME split-sequence)
      (NAME trivial-garbage FILENAME trivial-garbage)
-     (NAME trivial-types FILENAME trivial-types))
+     (NAME trivial-types FILENAME trivial-types)
+     (NAME usocket FILENAME usocket))
     DEPENDENCIES
     (alexandria bordeaux-threads cl-annot cl-postgres cl-syntax cl-syntax-annot
      closer-mop dbi md5 named-readtables split-sequence trivial-garbage
-     trivial-types)
-    VERSION cl-dbi-20170725-git SIBLINGS
+     trivial-types usocket)
+    VERSION cl-dbi-20180131-git SIBLINGS
     (cl-dbi dbd-mysql dbd-sqlite3 dbi-test dbi) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbd-sqlite3.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbd-sqlite3.nix
index 1300aa476341..cce90acfdf9c 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbd-sqlite3.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbd-sqlite3.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''dbd-sqlite3'';
-  version = ''cl-dbi-20170725-git'';
+  version = ''cl-dbi-20180131-git'';
 
   description = ''Database driver for SQLite3.'';
 
   deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."cl-annot" args."cl-syntax" args."cl-syntax-annot" args."closer-mop" args."dbi" args."iterate" args."named-readtables" args."split-sequence" args."sqlite" args."trivial-features" args."trivial-types" args."uiop" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-dbi/2017-07-25/cl-dbi-20170725-git.tgz'';
-    sha256 = ''1gmd5y44nidqmxw7zk0mxl4mgl3mcjf1v05gjdslp3ginzznrqzl'';
+    url = ''http://beta.quicklisp.org/archive/cl-dbi/2018-01-31/cl-dbi-20180131-git.tgz'';
+    sha256 = ''0hz5na9aqfi3z78yhzz4dhf2zy3h0v639w41w8b1adffyqqf1vhn'';
   };
 
   packageName = "dbd-sqlite3";
@@ -18,9 +18,9 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM dbd-sqlite3 DESCRIPTION Database driver for SQLite3. SHA256
-    1gmd5y44nidqmxw7zk0mxl4mgl3mcjf1v05gjdslp3ginzznrqzl URL
-    http://beta.quicklisp.org/archive/cl-dbi/2017-07-25/cl-dbi-20170725-git.tgz
-    MD5 a9fe67b7fea2640cea9708342a1347bd NAME dbd-sqlite3 FILENAME dbd-sqlite3
+    0hz5na9aqfi3z78yhzz4dhf2zy3h0v639w41w8b1adffyqqf1vhn URL
+    http://beta.quicklisp.org/archive/cl-dbi/2018-01-31/cl-dbi-20180131-git.tgz
+    MD5 7dacf1c276fab38b952813795ff1f707 NAME dbd-sqlite3 FILENAME dbd-sqlite3
     DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
@@ -38,5 +38,5 @@ rec {
     (alexandria babel bordeaux-threads cffi cl-annot cl-syntax cl-syntax-annot
      closer-mop dbi iterate named-readtables split-sequence sqlite
      trivial-features trivial-types uiop)
-    VERSION cl-dbi-20170725-git SIBLINGS
+    VERSION cl-dbi-20180131-git SIBLINGS
     (cl-dbi dbd-mysql dbd-postgres dbi-test dbi) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbi.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbi.nix
index 6e7611fd9748..31a48ea807b4 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbi.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/dbi.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''dbi'';
-  version = ''cl-20170725-git'';
+  version = ''cl-20180131-git'';
 
   description = ''Database independent interface for Common Lisp'';
 
   deps = [ args."alexandria" args."bordeaux-threads" args."cl-annot" args."cl-syntax" args."cl-syntax-annot" args."closer-mop" args."named-readtables" args."split-sequence" args."trivial-types" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-dbi/2017-07-25/cl-dbi-20170725-git.tgz'';
-    sha256 = ''1gmd5y44nidqmxw7zk0mxl4mgl3mcjf1v05gjdslp3ginzznrqzl'';
+    url = ''http://beta.quicklisp.org/archive/cl-dbi/2018-01-31/cl-dbi-20180131-git.tgz'';
+    sha256 = ''0hz5na9aqfi3z78yhzz4dhf2zy3h0v639w41w8b1adffyqqf1vhn'';
   };
 
   packageName = "dbi";
@@ -18,9 +18,9 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM dbi DESCRIPTION Database independent interface for Common Lisp
-    SHA256 1gmd5y44nidqmxw7zk0mxl4mgl3mcjf1v05gjdslp3ginzznrqzl URL
-    http://beta.quicklisp.org/archive/cl-dbi/2017-07-25/cl-dbi-20170725-git.tgz
-    MD5 a9fe67b7fea2640cea9708342a1347bd NAME dbi FILENAME dbi DEPS
+    SHA256 0hz5na9aqfi3z78yhzz4dhf2zy3h0v639w41w8b1adffyqqf1vhn URL
+    http://beta.quicklisp.org/archive/cl-dbi/2018-01-31/cl-dbi-20180131-git.tgz
+    MD5 7dacf1c276fab38b952813795ff1f707 NAME dbi FILENAME dbi DEPS
     ((NAME alexandria FILENAME alexandria)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
      (NAME cl-annot FILENAME cl-annot) (NAME cl-syntax FILENAME cl-syntax)
@@ -32,5 +32,5 @@ rec {
     DEPENDENCIES
     (alexandria bordeaux-threads cl-annot cl-syntax cl-syntax-annot closer-mop
      named-readtables split-sequence trivial-types)
-    VERSION cl-20170725-git SIBLINGS
+    VERSION cl-20180131-git SIBLINGS
     (cl-dbi dbd-mysql dbd-postgres dbd-sqlite3 dbi-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/dexador.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/dexador.nix
index 047cd3c0ffa0..d6885fc58d8c 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/dexador.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/dexador.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''dexador'';
-  version = ''20170725-git'';
+  version = ''20171130-git'';
 
   description = ''Yet another HTTP client for Common Lisp'';
 
-  deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."chipz" args."chunga" args."cl+ssl" args."cl-base64" args."cl-cookie" args."cl-fad" args."cl-ppcre" args."cl-reexport" args."cl-utilities" args."fast-http" args."fast-io" args."flexi-streams" args."local-time" args."proc-parse" args."quri" args."smart-buffer" args."split-sequence" args."static-vectors" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."trivial-mimes" args."usocket" args."xsubseq" ];
+  deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."cffi-grovel" args."chipz" args."chunga" args."cl+ssl" args."cl-base64" args."cl-cookie" args."cl-fad" args."cl-ppcre" args."cl-reexport" args."cl-utilities" args."fast-http" args."fast-io" args."flexi-streams" args."local-time" args."proc-parse" args."quri" args."smart-buffer" args."split-sequence" args."static-vectors" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."trivial-mimes" args."usocket" args."xsubseq" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/dexador/2017-07-25/dexador-20170725-git.tgz'';
-    sha256 = ''1x5jw07ydvc7rdw4jyzf3zb2dg2mspbkp9ysjaqpxlvkpdmqdmyl'';
+    url = ''http://beta.quicklisp.org/archive/dexador/2017-11-30/dexador-20171130-git.tgz'';
+    sha256 = ''0qg8jxij1s5j7jm2hxick9bvgc5nvq7fjalaah0rarynq70z61bd'';
   };
 
   packageName = "dexador";
@@ -18,16 +18,16 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM dexador DESCRIPTION Yet another HTTP client for Common Lisp SHA256
-    1x5jw07ydvc7rdw4jyzf3zb2dg2mspbkp9ysjaqpxlvkpdmqdmyl URL
-    http://beta.quicklisp.org/archive/dexador/2017-07-25/dexador-20170725-git.tgz
-    MD5 1ab5cda1ba8d5c81859349e6a5b99b29 NAME dexador FILENAME dexador DEPS
+    0qg8jxij1s5j7jm2hxick9bvgc5nvq7fjalaah0rarynq70z61bd URL
+    http://beta.quicklisp.org/archive/dexador/2017-11-30/dexador-20171130-git.tgz
+    MD5 e1b5154f2169708e2f351707a2bc135f NAME dexador FILENAME dexador DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
-     (NAME cffi FILENAME cffi) (NAME chipz FILENAME chipz)
-     (NAME chunga FILENAME chunga) (NAME cl+ssl FILENAME cl+ssl)
-     (NAME cl-base64 FILENAME cl-base64) (NAME cl-cookie FILENAME cl-cookie)
-     (NAME cl-fad FILENAME cl-fad) (NAME cl-ppcre FILENAME cl-ppcre)
-     (NAME cl-reexport FILENAME cl-reexport)
+     (NAME cffi FILENAME cffi) (NAME cffi-grovel FILENAME cffi-grovel)
+     (NAME chipz FILENAME chipz) (NAME chunga FILENAME chunga)
+     (NAME cl+ssl FILENAME cl+ssl) (NAME cl-base64 FILENAME cl-base64)
+     (NAME cl-cookie FILENAME cl-cookie) (NAME cl-fad FILENAME cl-fad)
+     (NAME cl-ppcre FILENAME cl-ppcre) (NAME cl-reexport FILENAME cl-reexport)
      (NAME cl-utilities FILENAME cl-utilities)
      (NAME fast-http FILENAME fast-http) (NAME fast-io FILENAME fast-io)
      (NAME flexi-streams FILENAME flexi-streams)
@@ -42,9 +42,9 @@ rec {
      (NAME trivial-mimes FILENAME trivial-mimes)
      (NAME usocket FILENAME usocket) (NAME xsubseq FILENAME xsubseq))
     DEPENDENCIES
-    (alexandria babel bordeaux-threads cffi chipz chunga cl+ssl cl-base64
-     cl-cookie cl-fad cl-ppcre cl-reexport cl-utilities fast-http fast-io
-     flexi-streams local-time proc-parse quri smart-buffer split-sequence
-     static-vectors trivial-features trivial-garbage trivial-gray-streams
-     trivial-mimes usocket xsubseq)
-    VERSION 20170725-git SIBLINGS (dexador-test) PARASITES NIL) */
+    (alexandria babel bordeaux-threads cffi cffi-grovel chipz chunga cl+ssl
+     cl-base64 cl-cookie cl-fad cl-ppcre cl-reexport cl-utilities fast-http
+     fast-io flexi-streams local-time proc-parse quri smart-buffer
+     split-sequence static-vectors trivial-features trivial-garbage
+     trivial-gray-streams trivial-mimes usocket xsubseq)
+    VERSION 20171130-git SIBLINGS (dexador-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/do-urlencode.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/do-urlencode.nix
index 08521a07d740..95d335493b7d 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/do-urlencode.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/do-urlencode.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''do-urlencode'';
-  version = ''20130720-git'';
+  version = ''20170830-git'';
 
   description = ''Percent Encoding (aka URL Encoding) library'';
 
   deps = [ args."alexandria" args."babel" args."babel-streams" args."trivial-features" args."trivial-gray-streams" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/do-urlencode/2013-07-20/do-urlencode-20130720-git.tgz'';
-    sha256 = ''19l4rwqc52w7nrpy994b3n2dcv8pjgc530yn2xmgqlqabpxpz3xa'';
+    url = ''http://beta.quicklisp.org/archive/do-urlencode/2017-08-30/do-urlencode-20170830-git.tgz'';
+    sha256 = ''1584prmmz601fp396qxrivylb7nrnclg9rnwrsnwiij79v6zz40n'';
   };
 
   packageName = "do-urlencode";
@@ -18,9 +18,9 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM do-urlencode DESCRIPTION Percent Encoding (aka URL Encoding) library
-    SHA256 19l4rwqc52w7nrpy994b3n2dcv8pjgc530yn2xmgqlqabpxpz3xa URL
-    http://beta.quicklisp.org/archive/do-urlencode/2013-07-20/do-urlencode-20130720-git.tgz
-    MD5 c8085e138711c225042acf83b4bf0507 NAME do-urlencode FILENAME
+    SHA256 1584prmmz601fp396qxrivylb7nrnclg9rnwrsnwiij79v6zz40n URL
+    http://beta.quicklisp.org/archive/do-urlencode/2017-08-30/do-urlencode-20170830-git.tgz
+    MD5 071a18bb58ed5c7d5184b34e672b5d91 NAME do-urlencode FILENAME
     do-urlencode DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME babel-streams FILENAME babel-streams)
@@ -28,4 +28,4 @@ rec {
      (NAME trivial-gray-streams FILENAME trivial-gray-streams))
     DEPENDENCIES
     (alexandria babel babel-streams trivial-features trivial-gray-streams)
-    VERSION 20130720-git SIBLINGS NIL PARASITES NIL) */
+    VERSION 20170830-git SIBLINGS NIL PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/documentation-utils.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/documentation-utils.nix
index 52c95b260e64..0c3470d755cf 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/documentation-utils.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/documentation-utils.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''documentation-utils'';
-  version = ''20170630-git'';
+  version = ''20180131-git'';
 
   description = ''A few simple tools to help you with documenting your library.'';
 
   deps = [ args."trivial-indent" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/documentation-utils/2017-06-30/documentation-utils-20170630-git.tgz'';
-    sha256 = ''0iz3r5llv0rv8l37fdcjrx9zibbaqf9nd6xhy5n2hf024997bbks'';
+    url = ''http://beta.quicklisp.org/archive/documentation-utils/2018-01-31/documentation-utils-20180131-git.tgz'';
+    sha256 = ''0kyxjcl7dvylymzvmrn90kdwaxgrzyzpi1mqpirsr3yyb8h71avm'';
   };
 
   packageName = "documentation-utils";
@@ -19,9 +19,9 @@ rec {
 }
 /* (SYSTEM documentation-utils DESCRIPTION
     A few simple tools to help you with documenting your library. SHA256
-    0iz3r5llv0rv8l37fdcjrx9zibbaqf9nd6xhy5n2hf024997bbks URL
-    http://beta.quicklisp.org/archive/documentation-utils/2017-06-30/documentation-utils-20170630-git.tgz
-    MD5 7c0541d4207ba221a251c8c3ec7a8cac NAME documentation-utils FILENAME
+    0kyxjcl7dvylymzvmrn90kdwaxgrzyzpi1mqpirsr3yyb8h71avm URL
+    http://beta.quicklisp.org/archive/documentation-utils/2018-01-31/documentation-utils-20180131-git.tgz
+    MD5 375dbb8ce48543fce1526eeea8d2a976 NAME documentation-utils FILENAME
     documentation-utils DEPS ((NAME trivial-indent FILENAME trivial-indent))
-    DEPENDENCIES (trivial-indent) VERSION 20170630-git SIBLINGS NIL PARASITES
+    DEPENDENCIES (trivial-indent) VERSION 20180131-git SIBLINGS NIL PARASITES
     NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/drakma.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/drakma.nix
index aac0560e6772..44ce34a2cb33 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/drakma.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/drakma.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''drakma'';
-  version = ''v2.0.3'';
+  version = ''v2.0.4'';
 
   description = ''Full-featured http/https client based on usocket'';
 
-  deps = [ args."chipz" args."chunga" args."cl+ssl" args."cl-base64" args."cl-ppcre" args."flexi-streams" args."puri" args."usocket" ];
+  deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."chipz" args."chunga" args."cl+ssl" args."cl-base64" args."cl-ppcre" args."flexi-streams" args."puri" args."split-sequence" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."usocket" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/drakma/2017-06-30/drakma-v2.0.3.tgz'';
-    sha256 = ''1xbbwd2gg17pq03bblj6imh7lq39z2w3yix6fm25509gyhs76ymd'';
+    url = ''http://beta.quicklisp.org/archive/drakma/2017-08-30/drakma-v2.0.4.tgz'';
+    sha256 = ''0i0dmw1b245yc0f8f8ww8cnhsji7vsnr7868p62c953ccwlcj5ga'';
   };
 
   packageName = "drakma";
@@ -18,14 +18,22 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM drakma DESCRIPTION Full-featured http/https client based on usocket
-    SHA256 1xbbwd2gg17pq03bblj6imh7lq39z2w3yix6fm25509gyhs76ymd URL
-    http://beta.quicklisp.org/archive/drakma/2017-06-30/drakma-v2.0.3.tgz MD5
-    3578c67b445cf982414ff78b2fb8d295 NAME drakma FILENAME drakma DEPS
-    ((NAME chipz FILENAME chipz) (NAME chunga FILENAME chunga)
-     (NAME cl+ssl FILENAME cl+ssl) (NAME cl-base64 FILENAME cl-base64)
-     (NAME cl-ppcre FILENAME cl-ppcre)
+    SHA256 0i0dmw1b245yc0f8f8ww8cnhsji7vsnr7868p62c953ccwlcj5ga URL
+    http://beta.quicklisp.org/archive/drakma/2017-08-30/drakma-v2.0.4.tgz MD5
+    1c668721156beadeca4f6536677e143e NAME drakma FILENAME drakma DEPS
+    ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
+     (NAME bordeaux-threads FILENAME bordeaux-threads)
+     (NAME cffi FILENAME cffi) (NAME chipz FILENAME chipz)
+     (NAME chunga FILENAME chunga) (NAME cl+ssl FILENAME cl+ssl)
+     (NAME cl-base64 FILENAME cl-base64) (NAME cl-ppcre FILENAME cl-ppcre)
      (NAME flexi-streams FILENAME flexi-streams) (NAME puri FILENAME puri)
+     (NAME split-sequence FILENAME split-sequence)
+     (NAME trivial-features FILENAME trivial-features)
+     (NAME trivial-garbage FILENAME trivial-garbage)
+     (NAME trivial-gray-streams FILENAME trivial-gray-streams)
      (NAME usocket FILENAME usocket))
     DEPENDENCIES
-    (chipz chunga cl+ssl cl-base64 cl-ppcre flexi-streams puri usocket) VERSION
-    v2.0.3 SIBLINGS (drakma-test) PARASITES NIL) */
+    (alexandria babel bordeaux-threads cffi chipz chunga cl+ssl cl-base64
+     cl-ppcre flexi-streams puri split-sequence trivial-features
+     trivial-garbage trivial-gray-streams usocket)
+    VERSION v2.0.4 SIBLINGS (drakma-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/esrap.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/esrap.nix
index 2ef373aed8af..b9f17a5d241f 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/esrap.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/esrap.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''esrap'';
-  version = ''20170630-git'';
+  version = ''20180131-git'';
 
   parasites = [ "esrap/tests" ];
 
@@ -10,8 +10,8 @@ rec {
   deps = [ args."alexandria" args."fiveam" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/esrap/2017-06-30/esrap-20170630-git.tgz'';
-    sha256 = ''172ph55kb3yr0gciybza1rbi6khlnz4vriijvcjkn6m79kdnk1xh'';
+    url = ''http://beta.quicklisp.org/archive/esrap/2018-01-31/esrap-20180131-git.tgz'';
+    sha256 = ''1kgr77w1ya125c04h6szxhzkxnq578rdf8f399wadqkav6x9dpkc'';
   };
 
   packageName = "esrap";
@@ -21,9 +21,9 @@ rec {
 }
 /* (SYSTEM esrap DESCRIPTION
     A Packrat / Parsing Grammar / TDPL parser for Common Lisp. SHA256
-    172ph55kb3yr0gciybza1rbi6khlnz4vriijvcjkn6m79kdnk1xh URL
-    http://beta.quicklisp.org/archive/esrap/2017-06-30/esrap-20170630-git.tgz
-    MD5 bfabfebc5f5d49106df318ae2798ac45 NAME esrap FILENAME esrap DEPS
+    1kgr77w1ya125c04h6szxhzkxnq578rdf8f399wadqkav6x9dpkc URL
+    http://beta.quicklisp.org/archive/esrap/2018-01-31/esrap-20180131-git.tgz
+    MD5 89b22e10575198b9f680e0c4e90bec2c NAME esrap FILENAME esrap DEPS
     ((NAME alexandria FILENAME alexandria) (NAME fiveam FILENAME fiveam))
-    DEPENDENCIES (alexandria fiveam) VERSION 20170630-git SIBLINGS NIL
+    DEPENDENCIES (alexandria fiveam) VERSION 20180131-git SIBLINGS NIL
     PARASITES (esrap/tests)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/fast-http.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/fast-http.nix
index e890f4e81ffe..99792023bdd0 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/fast-http.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/fast-http.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''fast-http'';
-  version = ''20170630-git'';
+  version = ''20180131-git'';
 
   description = ''A fast HTTP protocol parser in Common Lisp'';
 
-  deps = [ args."alexandria" args."babel" args."cl-utilities" args."proc-parse" args."smart-buffer" args."xsubseq" ];
+  deps = [ args."alexandria" args."babel" args."cl-utilities" args."flexi-streams" args."proc-parse" args."smart-buffer" args."trivial-features" args."trivial-gray-streams" args."xsubseq" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/fast-http/2017-06-30/fast-http-20170630-git.tgz'';
-    sha256 = ''0fkqwbwqc9a783ynjbszimcrannpqq4ja6wcf8ybgizr4zvsgj29'';
+    url = ''http://beta.quicklisp.org/archive/fast-http/2018-01-31/fast-http-20180131-git.tgz'';
+    sha256 = ''057wg23a1pfdr3522nzjpclxdrmx3azbnw57nkvdjmfp6fyb3rpg'';
   };
 
   packageName = "fast-http";
@@ -18,13 +18,18 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM fast-http DESCRIPTION A fast HTTP protocol parser in Common Lisp
-    SHA256 0fkqwbwqc9a783ynjbszimcrannpqq4ja6wcf8ybgizr4zvsgj29 URL
-    http://beta.quicklisp.org/archive/fast-http/2017-06-30/fast-http-20170630-git.tgz
-    MD5 d117d59c1f71965e0c32b19e6790cf9a NAME fast-http FILENAME fast-http DEPS
+    SHA256 057wg23a1pfdr3522nzjpclxdrmx3azbnw57nkvdjmfp6fyb3rpg URL
+    http://beta.quicklisp.org/archive/fast-http/2018-01-31/fast-http-20180131-git.tgz
+    MD5 0722e935fb644d57d44e8604e41e689e NAME fast-http FILENAME fast-http DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME cl-utilities FILENAME cl-utilities)
+     (NAME flexi-streams FILENAME flexi-streams)
      (NAME proc-parse FILENAME proc-parse)
-     (NAME smart-buffer FILENAME smart-buffer) (NAME xsubseq FILENAME xsubseq))
+     (NAME smart-buffer FILENAME smart-buffer)
+     (NAME trivial-features FILENAME trivial-features)
+     (NAME trivial-gray-streams FILENAME trivial-gray-streams)
+     (NAME xsubseq FILENAME xsubseq))
     DEPENDENCIES
-    (alexandria babel cl-utilities proc-parse smart-buffer xsubseq) VERSION
-    20170630-git SIBLINGS (fast-http-test) PARASITES NIL) */
+    (alexandria babel cl-utilities flexi-streams proc-parse smart-buffer
+     trivial-features trivial-gray-streams xsubseq)
+    VERSION 20180131-git SIBLINGS (fast-http-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/fast-io.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/fast-io.nix
index 8b9d5e5408b8..f78b7ae0cb69 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/fast-io.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/fast-io.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''fast-io'';
-  version = ''20170630-git'';
+  version = ''20171023-git'';
 
   description = ''Alternative I/O mechanism to a stream or vector'';
 
-  deps = [ args."alexandria" args."static-vectors" args."trivial-gray-streams" ];
+  deps = [ args."alexandria" args."babel" args."cffi" args."cffi-grovel" args."static-vectors" args."trivial-features" args."trivial-gray-streams" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/fast-io/2017-06-30/fast-io-20170630-git.tgz'';
-    sha256 = ''0wg40jv6hn4ijks026d2aaz5pr3zfxxzaakyzzjka6981g9rgkrg'';
+    url = ''http://beta.quicklisp.org/archive/fast-io/2017-10-23/fast-io-20171023-git.tgz'';
+    sha256 = ''09w4awnvw772s24ivgzx2irhy701nrsxbim6ip5rc70rfzbff8sl'';
   };
 
   packageName = "fast-io";
@@ -18,11 +18,15 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM fast-io DESCRIPTION Alternative I/O mechanism to a stream or vector
-    SHA256 0wg40jv6hn4ijks026d2aaz5pr3zfxxzaakyzzjka6981g9rgkrg URL
-    http://beta.quicklisp.org/archive/fast-io/2017-06-30/fast-io-20170630-git.tgz
-    MD5 34bfe5f306f2e0f6da128fe024ee242d NAME fast-io FILENAME fast-io DEPS
-    ((NAME alexandria FILENAME alexandria)
+    SHA256 09w4awnvw772s24ivgzx2irhy701nrsxbim6ip5rc70rfzbff8sl URL
+    http://beta.quicklisp.org/archive/fast-io/2017-10-23/fast-io-20171023-git.tgz
+    MD5 89105f8277f3bf3709fae1b789e3d5ad NAME fast-io FILENAME fast-io DEPS
+    ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
+     (NAME cffi FILENAME cffi) (NAME cffi-grovel FILENAME cffi-grovel)
      (NAME static-vectors FILENAME static-vectors)
+     (NAME trivial-features FILENAME trivial-features)
      (NAME trivial-gray-streams FILENAME trivial-gray-streams))
-    DEPENDENCIES (alexandria static-vectors trivial-gray-streams) VERSION
-    20170630-git SIBLINGS (fast-io-test) PARASITES NIL) */
+    DEPENDENCIES
+    (alexandria babel cffi cffi-grovel static-vectors trivial-features
+     trivial-gray-streams)
+    VERSION 20171023-git SIBLINGS (fast-io-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/fiasco.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/fiasco.nix
new file mode 100644
index 000000000000..245ee8b394af
--- /dev/null
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/fiasco.nix
@@ -0,0 +1,28 @@
+args @ { fetchurl, ... }:
+rec {
+  baseName = ''fiasco'';
+  version = ''20171227-git'';
+
+  parasites = [ "fiasco-self-tests" ];
+
+  description = ''A Common Lisp test framework that treasures your failures, logical continuation of Stefil.'';
+
+  deps = [ args."alexandria" ];
+
+  src = fetchurl {
+    url = ''http://beta.quicklisp.org/archive/fiasco/2017-12-27/fiasco-20171227-git.tgz'';
+    sha256 = ''1kv88yp4vjglahvknaxcdsp2kiwbs1nm94f857mkr2pmy87qbqx2'';
+  };
+
+  packageName = "fiasco";
+
+  asdFilesToKeep = ["fiasco.asd"];
+  overrides = x: x;
+}
+/* (SYSTEM fiasco DESCRIPTION
+    A Common Lisp test framework that treasures your failures, logical continuation of Stefil.
+    SHA256 1kv88yp4vjglahvknaxcdsp2kiwbs1nm94f857mkr2pmy87qbqx2 URL
+    http://beta.quicklisp.org/archive/fiasco/2017-12-27/fiasco-20171227-git.tgz
+    MD5 3cc915e91f18617eb3d436b6fea9dd49 NAME fiasco FILENAME fiasco DEPS
+    ((NAME alexandria FILENAME alexandria)) DEPENDENCIES (alexandria) VERSION
+    20171227-git SIBLINGS NIL PARASITES (fiasco-self-tests)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/flexi-streams.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/flexi-streams.nix
index 69aeecd8aa27..6e652e8b312e 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/flexi-streams.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/flexi-streams.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''flexi-streams'';
-  version = ''1.0.15'';
+  version = ''20171227-git'';
 
   parasites = [ "flexi-streams-test" ];
 
@@ -10,8 +10,8 @@ rec {
   deps = [ args."trivial-gray-streams" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/flexi-streams/2015-07-09/flexi-streams-1.0.15.tgz'';
-    sha256 = ''0zkx335winqs7xigbmxhhkhcsfa9hjhf1q6r4q710y29fbhpc37p'';
+    url = ''http://beta.quicklisp.org/archive/flexi-streams/2017-12-27/flexi-streams-20171227-git.tgz'';
+    sha256 = ''1hw3w8syz7pyggxz1fwskrvjjwz5518vz5clkkjxfshlzqhwxfyc'';
   };
 
   packageName = "flexi-streams";
@@ -20,10 +20,10 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM flexi-streams DESCRIPTION Flexible bivalent streams for Common Lisp
-    SHA256 0zkx335winqs7xigbmxhhkhcsfa9hjhf1q6r4q710y29fbhpc37p URL
-    http://beta.quicklisp.org/archive/flexi-streams/2015-07-09/flexi-streams-1.0.15.tgz
-    MD5 02dbb5a0c5f982e0c7a88aad9a25004e NAME flexi-streams FILENAME
+    SHA256 1hw3w8syz7pyggxz1fwskrvjjwz5518vz5clkkjxfshlzqhwxfyc URL
+    http://beta.quicklisp.org/archive/flexi-streams/2017-12-27/flexi-streams-20171227-git.tgz
+    MD5 583aa697051062a0d6a6a73923f865d3 NAME flexi-streams FILENAME
     flexi-streams DEPS
     ((NAME trivial-gray-streams FILENAME trivial-gray-streams)) DEPENDENCIES
-    (trivial-gray-streams) VERSION 1.0.15 SIBLINGS NIL PARASITES
+    (trivial-gray-streams) VERSION 20171227-git SIBLINGS NIL PARASITES
     (flexi-streams-test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/form-fiddle.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/form-fiddle.nix
index 4847ee328d0e..2aa5c0749250 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/form-fiddle.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/form-fiddle.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''form-fiddle'';
-  version = ''20170630-git'';
+  version = ''20180131-git'';
 
   description = ''A collection of utilities to destructure lambda forms.'';
 
-  deps = [ args."documentation-utils" ];
+  deps = [ args."documentation-utils" args."trivial-indent" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/form-fiddle/2017-06-30/form-fiddle-20170630-git.tgz'';
-    sha256 = ''0w4isi9y2h6vswq418hj50223aac89iadl71y86wxdlznm3kdvjf'';
+    url = ''http://beta.quicklisp.org/archive/form-fiddle/2018-01-31/form-fiddle-20180131-git.tgz'';
+    sha256 = ''1i7rzn4ilr46wpkd2i10q875bxy8b54v7rvqzcq752hilx15hiff'';
   };
 
   packageName = "form-fiddle";
@@ -19,8 +19,11 @@ rec {
 }
 /* (SYSTEM form-fiddle DESCRIPTION
     A collection of utilities to destructure lambda forms. SHA256
-    0w4isi9y2h6vswq418hj50223aac89iadl71y86wxdlznm3kdvjf URL
-    http://beta.quicklisp.org/archive/form-fiddle/2017-06-30/form-fiddle-20170630-git.tgz
-    MD5 9c8eb18dfedebcf43718cc259c910aa1 NAME form-fiddle FILENAME form-fiddle
-    DEPS ((NAME documentation-utils FILENAME documentation-utils)) DEPENDENCIES
-    (documentation-utils) VERSION 20170630-git SIBLINGS NIL PARASITES NIL) */
+    1i7rzn4ilr46wpkd2i10q875bxy8b54v7rvqzcq752hilx15hiff URL
+    http://beta.quicklisp.org/archive/form-fiddle/2018-01-31/form-fiddle-20180131-git.tgz
+    MD5 a0cc2ea1af29889e4991f7fefac366dd NAME form-fiddle FILENAME form-fiddle
+    DEPS
+    ((NAME documentation-utils FILENAME documentation-utils)
+     (NAME trivial-indent FILENAME trivial-indent))
+    DEPENDENCIES (documentation-utils trivial-indent) VERSION 20180131-git
+    SIBLINGS NIL PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/fset.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/fset.nix
index 7b0ea1ff2ada..d901df215a68 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/fset.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/fset.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''fset'';
-  version = ''20150113-git'';
+  version = ''20171019-git'';
 
   description = ''A functional set-theoretic collections library.
 See: http://www.ergy.com/FSet.html
@@ -10,8 +10,8 @@ See: http://www.ergy.com/FSet.html
   deps = [ args."misc-extensions" args."mt19937" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/fset/2015-01-13/fset-20150113-git.tgz'';
-    sha256 = ''1k9c48jahw8i4zhx6dc96n0jzxjy2ascr2wng9hmm8vjhhqs5sl0'';
+    url = ''http://beta.quicklisp.org/archive/fset/2017-10-19/fset-20171019-git.tgz'';
+    sha256 = ''07qxbj40kmjknmvvb47prj81mpi6j39150iw57hlrzdhlndvilwg'';
   };
 
   packageName = "fset";
@@ -22,10 +22,10 @@ See: http://www.ergy.com/FSet.html
 /* (SYSTEM fset DESCRIPTION A functional set-theoretic collections library.
 See: http://www.ergy.com/FSet.html
 
-    SHA256 1k9c48jahw8i4zhx6dc96n0jzxjy2ascr2wng9hmm8vjhhqs5sl0 URL
-    http://beta.quicklisp.org/archive/fset/2015-01-13/fset-20150113-git.tgz MD5
-    89f958cc900e712aed0750b336efbe15 NAME fset FILENAME fset DEPS
+    SHA256 07qxbj40kmjknmvvb47prj81mpi6j39150iw57hlrzdhlndvilwg URL
+    http://beta.quicklisp.org/archive/fset/2017-10-19/fset-20171019-git.tgz MD5
+    dc8de5917c513302dd0e135e6c133978 NAME fset FILENAME fset DEPS
     ((NAME misc-extensions FILENAME misc-extensions)
      (NAME mt19937 FILENAME mt19937))
-    DEPENDENCIES (misc-extensions mt19937) VERSION 20150113-git SIBLINGS NIL
+    DEPENDENCIES (misc-extensions mt19937) VERSION 20171019-git SIBLINGS NIL
     PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/http-body.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/http-body.nix
index 04e53bd3fc19..604ccf0bdc73 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/http-body.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/http-body.nix
@@ -5,7 +5,7 @@ rec {
 
   description = ''HTTP POST data parser for Common Lisp'';
 
-  deps = [ args."alexandria" args."babel" args."cl-annot" args."cl-ppcre" args."cl-syntax" args."cl-utilities" args."fast-http" args."fast-io" args."flexi-streams" args."jonathan" args."proc-parse" args."quri" args."smart-buffer" args."split-sequence" args."trivial-gray-streams" args."xsubseq" ];
+  deps = [ args."alexandria" args."babel" args."cl-annot" args."cl-ppcre" args."cl-syntax" args."cl-utilities" args."fast-http" args."fast-io" args."flexi-streams" args."jonathan" args."proc-parse" args."quri" args."smart-buffer" args."split-sequence" args."trivial-features" args."trivial-gray-streams" args."xsubseq" ];
 
   src = fetchurl {
     url = ''http://beta.quicklisp.org/archive/http-body/2016-12-04/http-body-20161204-git.tgz'';
@@ -30,10 +30,11 @@ rec {
      (NAME jonathan FILENAME jonathan) (NAME proc-parse FILENAME proc-parse)
      (NAME quri FILENAME quri) (NAME smart-buffer FILENAME smart-buffer)
      (NAME split-sequence FILENAME split-sequence)
+     (NAME trivial-features FILENAME trivial-features)
      (NAME trivial-gray-streams FILENAME trivial-gray-streams)
      (NAME xsubseq FILENAME xsubseq))
     DEPENDENCIES
     (alexandria babel cl-annot cl-ppcre cl-syntax cl-utilities fast-http
      fast-io flexi-streams jonathan proc-parse quri smart-buffer split-sequence
-     trivial-gray-streams xsubseq)
+     trivial-features trivial-gray-streams xsubseq)
     VERSION 20161204-git SIBLINGS (http-body-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/hunchentoot.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/hunchentoot.nix
index 5ce8459d9e2c..6a103b5ac1c5 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/hunchentoot.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/hunchentoot.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''hunchentoot'';
-  version = ''v1.2.37'';
+  version = ''v1.2.38'';
 
   parasites = [ "hunchentoot-dev" "hunchentoot-test" ];
 
@@ -13,8 +13,8 @@ rec {
   deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."chunga" args."cl+ssl" args."cl-base64" args."cl-fad" args."cl-ppcre" args."cl-who" args."cxml-stp" args."drakma" args."flexi-streams" args."md5" args."rfc2388" args."split-sequence" args."swank" args."trivial-backtrace" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."usocket" args."xpath" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/hunchentoot/2017-07-25/hunchentoot-v1.2.37.tgz'';
-    sha256 = ''1r0p8qasd2zy9a8l58jysz5bb1gj79cz2ikr93in0my8q44pg9lc'';
+    url = ''http://beta.quicklisp.org/archive/hunchentoot/2017-12-27/hunchentoot-v1.2.38.tgz'';
+    sha256 = ''1d3gnqbk2s3g9q51sx8mcsp2rmbvcfanbnljsf19npgfmz1ypsgd'';
   };
 
   packageName = "hunchentoot";
@@ -27,9 +27,9 @@ rec {
   BORDEAUX-THREADS.  It supports HTTP 1.1, serves static files, has a
   simple framework for user-defined handlers and can be extended
   through subclassing.
-    SHA256 1r0p8qasd2zy9a8l58jysz5bb1gj79cz2ikr93in0my8q44pg9lc URL
-    http://beta.quicklisp.org/archive/hunchentoot/2017-07-25/hunchentoot-v1.2.37.tgz
-    MD5 3fd6a6c4dd0d32db7b71828b52494325 NAME hunchentoot FILENAME hunchentoot
+    SHA256 1d3gnqbk2s3g9q51sx8mcsp2rmbvcfanbnljsf19npgfmz1ypsgd URL
+    http://beta.quicklisp.org/archive/hunchentoot/2017-12-27/hunchentoot-v1.2.38.tgz
+    MD5 878a7833eb34a53231011b78e998e2fa NAME hunchentoot FILENAME hunchentoot
     DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
@@ -50,4 +50,4 @@ rec {
      cl-ppcre cl-who cxml-stp drakma flexi-streams md5 rfc2388 split-sequence
      swank trivial-backtrace trivial-features trivial-garbage
      trivial-gray-streams usocket xpath)
-    VERSION v1.2.37 SIBLINGS NIL PARASITES (hunchentoot-dev hunchentoot-test)) */
+    VERSION v1.2.38 SIBLINGS NIL PARASITES (hunchentoot-dev hunchentoot-test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/ieee-floats.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/ieee-floats.nix
index 3bb44ea2fc6a..4211dfbc9194 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/ieee-floats.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/ieee-floats.nix
@@ -1,17 +1,17 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''ieee-floats'';
-  version = ''20160318-git'';
+  version = ''20170830-git'';
 
   parasites = [ "ieee-floats-tests" ];
 
-  description = '''';
+  description = ''Convert floating point values to IEEE 754 binary representation'';
 
-  deps = [ args."eos" ];
+  deps = [ args."fiveam" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/ieee-floats/2016-03-18/ieee-floats-20160318-git.tgz'';
-    sha256 = ''0vw4q6q5yygfxfwx5bki4kl9lqszmhnplcl55qh8raxmb03alyx4'';
+    url = ''http://beta.quicklisp.org/archive/ieee-floats/2017-08-30/ieee-floats-20170830-git.tgz'';
+    sha256 = ''15c4q4w3cda82vqlpvdfrnah6ms6vxbjf4a0chd10daw72rwayqk'';
   };
 
   packageName = "ieee-floats";
@@ -19,9 +19,10 @@ rec {
   asdFilesToKeep = ["ieee-floats.asd"];
   overrides = x: x;
 }
-/* (SYSTEM ieee-floats DESCRIPTION NIL SHA256
-    0vw4q6q5yygfxfwx5bki4kl9lqszmhnplcl55qh8raxmb03alyx4 URL
-    http://beta.quicklisp.org/archive/ieee-floats/2016-03-18/ieee-floats-20160318-git.tgz
-    MD5 84d679a4dffddc3b0cff944adde623c5 NAME ieee-floats FILENAME ieee-floats
-    DEPS ((NAME eos FILENAME eos)) DEPENDENCIES (eos) VERSION 20160318-git
-    SIBLINGS NIL PARASITES (ieee-floats-tests)) */
+/* (SYSTEM ieee-floats DESCRIPTION
+    Convert floating point values to IEEE 754 binary representation SHA256
+    15c4q4w3cda82vqlpvdfrnah6ms6vxbjf4a0chd10daw72rwayqk URL
+    http://beta.quicklisp.org/archive/ieee-floats/2017-08-30/ieee-floats-20170830-git.tgz
+    MD5 3434b4d91224ca6a817ced9d83f14bb6 NAME ieee-floats FILENAME ieee-floats
+    DEPS ((NAME fiveam FILENAME fiveam)) DEPENDENCIES (fiveam) VERSION
+    20170830-git SIBLINGS NIL PARASITES (ieee-floats-tests)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/ironclad.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/ironclad.nix
index 89301f90866f..578b251ecec2 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/ironclad.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/ironclad.nix
@@ -1,17 +1,17 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''ironclad'';
-  version = ''v0.34'';
+  version = ''v0.37'';
 
-  parasites = [ "ironclad-tests" ];
+  parasites = [ "ironclad/tests" ];
 
   description = ''A cryptographic toolkit written in pure Common Lisp'';
 
   deps = [ args."nibbles" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/ironclad/2017-06-30/ironclad-v0.34.tgz'';
-    sha256 = ''08xlnzs7hzbr0sa4aff4xb0b60dxcpad7fb5xsnjn3qjs7yydxk0'';
+    url = ''http://beta.quicklisp.org/archive/ironclad/2017-11-30/ironclad-v0.37.tgz'';
+    sha256 = ''061ln65yj9psch84nmsjrrlq41bkfv6iyg8sd9kpdc75lfc0vpi2'';
   };
 
   packageName = "ironclad";
@@ -21,8 +21,8 @@ rec {
 }
 /* (SYSTEM ironclad DESCRIPTION
     A cryptographic toolkit written in pure Common Lisp SHA256
-    08xlnzs7hzbr0sa4aff4xb0b60dxcpad7fb5xsnjn3qjs7yydxk0 URL
-    http://beta.quicklisp.org/archive/ironclad/2017-06-30/ironclad-v0.34.tgz
-    MD5 82db632975aa83b0dce3412c1aff4a80 NAME ironclad FILENAME ironclad DEPS
-    ((NAME nibbles FILENAME nibbles)) DEPENDENCIES (nibbles) VERSION v0.34
-    SIBLINGS (ironclad-text) PARASITES (ironclad-tests)) */
+    061ln65yj9psch84nmsjrrlq41bkfv6iyg8sd9kpdc75lfc0vpi2 URL
+    http://beta.quicklisp.org/archive/ironclad/2017-11-30/ironclad-v0.37.tgz
+    MD5 9d8734764eead79f3a5d230b8e800d8f NAME ironclad FILENAME ironclad DEPS
+    ((NAME nibbles FILENAME nibbles)) DEPENDENCIES (nibbles) VERSION v0.37
+    SIBLINGS (ironclad-text) PARASITES (ironclad/tests)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/iterate.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/iterate.nix
index 42980e0c9135..645048c71909 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/iterate.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/iterate.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''iterate'';
-  version = ''20160825-darcs'';
+  version = ''20180131-darcs'';
 
   parasites = [ "iterate/tests" ];
 
@@ -10,8 +10,8 @@ rec {
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/iterate/2016-08-25/iterate-20160825-darcs.tgz'';
-    sha256 = ''0kvz16gnxnkdz0fy1x8y5yr28nfm7i2qpvix7mgwccdpjmsb4pgm'';
+    url = ''http://beta.quicklisp.org/archive/iterate/2018-01-31/iterate-20180131-darcs.tgz'';
+    sha256 = ''05jlwd59w13k4n9x7a0mszdv7i78cbmx93w2p1yzsi30593rh9hj'';
   };
 
   packageName = "iterate";
@@ -21,8 +21,8 @@ rec {
 }
 /* (SYSTEM iterate DESCRIPTION
     Jonathan Amsterdam's iterator/gatherer/accumulator facility SHA256
-    0kvz16gnxnkdz0fy1x8y5yr28nfm7i2qpvix7mgwccdpjmsb4pgm URL
-    http://beta.quicklisp.org/archive/iterate/2016-08-25/iterate-20160825-darcs.tgz
-    MD5 e73ff4898ce4831ff2a28817f32de86e NAME iterate FILENAME iterate DEPS NIL
-    DEPENDENCIES NIL VERSION 20160825-darcs SIBLINGS NIL PARASITES
+    05jlwd59w13k4n9x7a0mszdv7i78cbmx93w2p1yzsi30593rh9hj URL
+    http://beta.quicklisp.org/archive/iterate/2018-01-31/iterate-20180131-darcs.tgz
+    MD5 40a1776b445e42463c2c6f754468fb83 NAME iterate FILENAME iterate DEPS NIL
+    DEPENDENCIES NIL VERSION 20180131-darcs SIBLINGS NIL PARASITES
     (iterate/tests)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack-component.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack-component.nix
index 9f99f99d4ce3..408ef5dfabc9 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack-component.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack-component.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''lack-component'';
-  version = ''lack-20170725-git'';
+  version = ''lack-20180131-git'';
 
   description = '''';
 
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/lack/2017-07-25/lack-20170725-git.tgz'';
-    sha256 = ''1c5xlya1zm232zsala03a6m10m11hgqvbgx04kxl29yz0ldp7jbp'';
+    url = ''http://beta.quicklisp.org/archive/lack/2018-01-31/lack-20180131-git.tgz'';
+    sha256 = ''17ydk90rjxjijc2r6kcwkbhh0l4a83xvhrbp0bc8wzbpkh2plywl'';
   };
 
   packageName = "lack-component";
@@ -18,10 +18,10 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM lack-component DESCRIPTION NIL SHA256
-    1c5xlya1zm232zsala03a6m10m11hgqvbgx04kxl29yz0ldp7jbp URL
-    http://beta.quicklisp.org/archive/lack/2017-07-25/lack-20170725-git.tgz MD5
-    ab71d36ac49e4759806e9a2ace50ae53 NAME lack-component FILENAME
-    lack-component DEPS NIL DEPENDENCIES NIL VERSION lack-20170725-git SIBLINGS
+    17ydk90rjxjijc2r6kcwkbhh0l4a83xvhrbp0bc8wzbpkh2plywl URL
+    http://beta.quicklisp.org/archive/lack/2018-01-31/lack-20180131-git.tgz MD5
+    e1807a22a021ca27d8d1add9219091eb NAME lack-component FILENAME
+    lack-component DEPS NIL DEPENDENCIES NIL VERSION lack-20180131-git SIBLINGS
     (lack-middleware-accesslog lack-middleware-auth-basic
      lack-middleware-backtrace lack-middleware-csrf lack-middleware-mount
      lack-middleware-session lack-middleware-static lack-request lack-response
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack-middleware-backtrace.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack-middleware-backtrace.nix
index 2bbe5dcd33b4..a6816fa75c5c 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack-middleware-backtrace.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack-middleware-backtrace.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''lack-middleware-backtrace'';
-  version = ''lack-20170725-git'';
+  version = ''lack-20180131-git'';
 
   description = '''';
 
   deps = [ args."uiop" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/lack/2017-07-25/lack-20170725-git.tgz'';
-    sha256 = ''1c5xlya1zm232zsala03a6m10m11hgqvbgx04kxl29yz0ldp7jbp'';
+    url = ''http://beta.quicklisp.org/archive/lack/2018-01-31/lack-20180131-git.tgz'';
+    sha256 = ''17ydk90rjxjijc2r6kcwkbhh0l4a83xvhrbp0bc8wzbpkh2plywl'';
   };
 
   packageName = "lack-middleware-backtrace";
@@ -18,11 +18,11 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM lack-middleware-backtrace DESCRIPTION NIL SHA256
-    1c5xlya1zm232zsala03a6m10m11hgqvbgx04kxl29yz0ldp7jbp URL
-    http://beta.quicklisp.org/archive/lack/2017-07-25/lack-20170725-git.tgz MD5
-    ab71d36ac49e4759806e9a2ace50ae53 NAME lack-middleware-backtrace FILENAME
+    17ydk90rjxjijc2r6kcwkbhh0l4a83xvhrbp0bc8wzbpkh2plywl URL
+    http://beta.quicklisp.org/archive/lack/2018-01-31/lack-20180131-git.tgz MD5
+    e1807a22a021ca27d8d1add9219091eb NAME lack-middleware-backtrace FILENAME
     lack-middleware-backtrace DEPS ((NAME uiop FILENAME uiop)) DEPENDENCIES
-    (uiop) VERSION lack-20170725-git SIBLINGS
+    (uiop) VERSION lack-20180131-git SIBLINGS
     (lack-component lack-middleware-accesslog lack-middleware-auth-basic
      lack-middleware-csrf lack-middleware-mount lack-middleware-session
      lack-middleware-static lack-request lack-response lack-session-store-dbi
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack-util.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack-util.nix
index 38f834cd52b4..a056d9d0d146 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack-util.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack-util.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''lack-util'';
-  version = ''lack-20170725-git'';
+  version = ''lack-20180131-git'';
 
   description = '''';
 
   deps = [ args."ironclad" args."nibbles" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/lack/2017-07-25/lack-20170725-git.tgz'';
-    sha256 = ''1c5xlya1zm232zsala03a6m10m11hgqvbgx04kxl29yz0ldp7jbp'';
+    url = ''http://beta.quicklisp.org/archive/lack/2018-01-31/lack-20180131-git.tgz'';
+    sha256 = ''17ydk90rjxjijc2r6kcwkbhh0l4a83xvhrbp0bc8wzbpkh2plywl'';
   };
 
   packageName = "lack-util";
@@ -18,11 +18,11 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM lack-util DESCRIPTION NIL SHA256
-    1c5xlya1zm232zsala03a6m10m11hgqvbgx04kxl29yz0ldp7jbp URL
-    http://beta.quicklisp.org/archive/lack/2017-07-25/lack-20170725-git.tgz MD5
-    ab71d36ac49e4759806e9a2ace50ae53 NAME lack-util FILENAME lack-util DEPS
+    17ydk90rjxjijc2r6kcwkbhh0l4a83xvhrbp0bc8wzbpkh2plywl URL
+    http://beta.quicklisp.org/archive/lack/2018-01-31/lack-20180131-git.tgz MD5
+    e1807a22a021ca27d8d1add9219091eb NAME lack-util FILENAME lack-util DEPS
     ((NAME ironclad FILENAME ironclad) (NAME nibbles FILENAME nibbles))
-    DEPENDENCIES (ironclad nibbles) VERSION lack-20170725-git SIBLINGS
+    DEPENDENCIES (ironclad nibbles) VERSION lack-20180131-git SIBLINGS
     (lack-component lack-middleware-accesslog lack-middleware-auth-basic
      lack-middleware-backtrace lack-middleware-csrf lack-middleware-mount
      lack-middleware-session lack-middleware-static lack-request lack-response
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack.nix
index 0d65d48cf0a5..1c3998a3025c 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/lack.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''lack'';
-  version = ''20170725-git'';
+  version = ''20180131-git'';
 
   description = ''A minimal Clack'';
 
   deps = [ args."ironclad" args."lack-component" args."lack-util" args."nibbles" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/lack/2017-07-25/lack-20170725-git.tgz'';
-    sha256 = ''1c5xlya1zm232zsala03a6m10m11hgqvbgx04kxl29yz0ldp7jbp'';
+    url = ''http://beta.quicklisp.org/archive/lack/2018-01-31/lack-20180131-git.tgz'';
+    sha256 = ''17ydk90rjxjijc2r6kcwkbhh0l4a83xvhrbp0bc8wzbpkh2plywl'';
   };
 
   packageName = "lack";
@@ -18,14 +18,14 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM lack DESCRIPTION A minimal Clack SHA256
-    1c5xlya1zm232zsala03a6m10m11hgqvbgx04kxl29yz0ldp7jbp URL
-    http://beta.quicklisp.org/archive/lack/2017-07-25/lack-20170725-git.tgz MD5
-    ab71d36ac49e4759806e9a2ace50ae53 NAME lack FILENAME lack DEPS
+    17ydk90rjxjijc2r6kcwkbhh0l4a83xvhrbp0bc8wzbpkh2plywl URL
+    http://beta.quicklisp.org/archive/lack/2018-01-31/lack-20180131-git.tgz MD5
+    e1807a22a021ca27d8d1add9219091eb NAME lack FILENAME lack DEPS
     ((NAME ironclad FILENAME ironclad)
      (NAME lack-component FILENAME lack-component)
      (NAME lack-util FILENAME lack-util) (NAME nibbles FILENAME nibbles))
     DEPENDENCIES (ironclad lack-component lack-util nibbles) VERSION
-    20170725-git SIBLINGS
+    20180131-git SIBLINGS
     (lack-component lack-middleware-accesslog lack-middleware-auth-basic
      lack-middleware-backtrace lack-middleware-csrf lack-middleware-mount
      lack-middleware-session lack-middleware-static lack-request lack-response
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/let-plus.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/let-plus.nix
index a94c8439cf2a..1f6a0709b0f4 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/let-plus.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/let-plus.nix
@@ -1,17 +1,17 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''let-plus'';
-  version = ''20170124-git'';
+  version = ''20171130-git'';
 
-  parasites = [ "let-plus-tests" ];
+  parasites = [ "let-plus/tests" ];
 
   description = ''Destructuring extension of LET*.'';
 
   deps = [ args."alexandria" args."anaphora" args."lift" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/let-plus/2017-01-24/let-plus-20170124-git.tgz'';
-    sha256 = ''1hfsw4g36vccz2lx6gk375arjj6y85yh9ch3pq7yiybjlxx68xi8'';
+    url = ''http://beta.quicklisp.org/archive/let-plus/2017-11-30/let-plus-20171130-git.tgz'';
+    sha256 = ''1v8rp3ab6kp6v5kl58gi700wjs4qgmkxxkmhx2a1i6b2z934xkx7'';
   };
 
   packageName = "let-plus";
@@ -20,10 +20,10 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM let-plus DESCRIPTION Destructuring extension of LET*. SHA256
-    1hfsw4g36vccz2lx6gk375arjj6y85yh9ch3pq7yiybjlxx68xi8 URL
-    http://beta.quicklisp.org/archive/let-plus/2017-01-24/let-plus-20170124-git.tgz
-    MD5 1180608e4da53f3866a99d4cca72e3b1 NAME let-plus FILENAME let-plus DEPS
+    1v8rp3ab6kp6v5kl58gi700wjs4qgmkxxkmhx2a1i6b2z934xkx7 URL
+    http://beta.quicklisp.org/archive/let-plus/2017-11-30/let-plus-20171130-git.tgz
+    MD5 cd92097d436a513e7d0eac535617ca08 NAME let-plus FILENAME let-plus DEPS
     ((NAME alexandria FILENAME alexandria) (NAME anaphora FILENAME anaphora)
      (NAME lift FILENAME lift))
-    DEPENDENCIES (alexandria anaphora lift) VERSION 20170124-git SIBLINGS NIL
-    PARASITES (let-plus-tests)) */
+    DEPENDENCIES (alexandria anaphora lift) VERSION 20171130-git SIBLINGS NIL
+    PARASITES (let-plus/tests)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/lisp-namespace.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/lisp-namespace.nix
index 50bc9946ccae..7f88beb974b0 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/lisp-namespace.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/lisp-namespace.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''lisp-namespace'';
-  version = ''20170630-git'';
+  version = ''20171130-git'';
 
   description = ''Provides LISP-N --- extensible namespaces in Common Lisp.'';
 
   deps = [ args."alexandria" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/lisp-namespace/2017-06-30/lisp-namespace-20170630-git.tgz'';
-    sha256 = ''06mdrzjwmfynzljcs8ym8dscjlxpbbkmjfg912v68v7p2xzq6d0n'';
+    url = ''http://beta.quicklisp.org/archive/lisp-namespace/2017-11-30/lisp-namespace-20171130-git.tgz'';
+    sha256 = ''0vxk06c5434kcjv9p414yk23gs4rkibfq695is9y7wglck31fz2j'';
   };
 
   packageName = "lisp-namespace";
@@ -19,9 +19,9 @@ rec {
 }
 /* (SYSTEM lisp-namespace DESCRIPTION
     Provides LISP-N --- extensible namespaces in Common Lisp. SHA256
-    06mdrzjwmfynzljcs8ym8dscjlxpbbkmjfg912v68v7p2xzq6d0n URL
-    http://beta.quicklisp.org/archive/lisp-namespace/2017-06-30/lisp-namespace-20170630-git.tgz
-    MD5 f3379a60f7cc896a7cff384ff25a1de5 NAME lisp-namespace FILENAME
+    0vxk06c5434kcjv9p414yk23gs4rkibfq695is9y7wglck31fz2j URL
+    http://beta.quicklisp.org/archive/lisp-namespace/2017-11-30/lisp-namespace-20171130-git.tgz
+    MD5 d3052a13db167c6a53487f31753b7467 NAME lisp-namespace FILENAME
     lisp-namespace DEPS ((NAME alexandria FILENAME alexandria)) DEPENDENCIES
-    (alexandria) VERSION 20170630-git SIBLINGS (lisp-namespace.test) PARASITES
+    (alexandria) VERSION 20171130-git SIBLINGS (lisp-namespace.test) PARASITES
     NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/lisp-unit2.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/lisp-unit2.nix
index 47e57ba1285a..62197234305a 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/lisp-unit2.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/lisp-unit2.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''lisp-unit2'';
-  version = ''20160531-git'';
+  version = ''20180131-git'';
 
   parasites = [ "lisp-unit2-test" ];
 
@@ -10,8 +10,8 @@ rec {
   deps = [ args."alexandria" args."cl-interpol" args."cl-ppcre" args."cl-unicode" args."flexi-streams" args."iterate" args."symbol-munger" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/lisp-unit2/2016-05-31/lisp-unit2-20160531-git.tgz'';
-    sha256 = ''17frcygs515l611cwggm90xapl8xng9cylsrdh11ygmdxwwy59sv'';
+    url = ''http://beta.quicklisp.org/archive/lisp-unit2/2018-01-31/lisp-unit2-20180131-git.tgz'';
+    sha256 = ''04kwrg605mqzf3ghshgbygvvryk5kipl6gyc5kdaxafjxvhxaak7'';
   };
 
   packageName = "lisp-unit2";
@@ -21,9 +21,9 @@ rec {
 }
 /* (SYSTEM lisp-unit2 DESCRIPTION
     Common Lisp library that supports unit testing. SHA256
-    17frcygs515l611cwggm90xapl8xng9cylsrdh11ygmdxwwy59sv URL
-    http://beta.quicklisp.org/archive/lisp-unit2/2016-05-31/lisp-unit2-20160531-git.tgz
-    MD5 913675bff1f86453887681e72ae5914d NAME lisp-unit2 FILENAME lisp-unit2
+    04kwrg605mqzf3ghshgbygvvryk5kipl6gyc5kdaxafjxvhxaak7 URL
+    http://beta.quicklisp.org/archive/lisp-unit2/2018-01-31/lisp-unit2-20180131-git.tgz
+    MD5 d061fa640837441a5d2eecbefd8b2e69 NAME lisp-unit2 FILENAME lisp-unit2
     DEPS
     ((NAME alexandria FILENAME alexandria)
      (NAME cl-interpol FILENAME cl-interpol) (NAME cl-ppcre FILENAME cl-ppcre)
@@ -34,4 +34,4 @@ rec {
     DEPENDENCIES
     (alexandria cl-interpol cl-ppcre cl-unicode flexi-streams iterate
      symbol-munger)
-    VERSION 20160531-git SIBLINGS NIL PARASITES (lisp-unit2-test)) */
+    VERSION 20180131-git SIBLINGS NIL PARASITES (lisp-unit2-test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/local-time.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/local-time.nix
index f5137a5e927d..0b2556b2572d 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/local-time.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/local-time.nix
@@ -1,15 +1,17 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''local-time'';
-  version = ''20170725-git'';
+  version = ''20180131-git'';
+
+  parasites = [ "local-time/test" ];
 
   description = ''A library for manipulating dates and times, based on a paper by Erik Naggum'';
 
-  deps = [ args."alexandria" args."bordeaux-threads" args."cl-fad" ];
+  deps = [ args."alexandria" args."bordeaux-threads" args."cl-fad" args."stefil" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/local-time/2017-07-25/local-time-20170725-git.tgz'';
-    sha256 = ''05axwla93m5jml9lw6ljwzjhcl8pshfzxyqkvyj1w5l9klh569p9'';
+    url = ''http://beta.quicklisp.org/archive/local-time/2018-01-31/local-time-20180131-git.tgz'';
+    sha256 = ''1i8km0ndqk1kx914n0chi4c3kkk6m0zk0kplh87fgzwn4lh79rpr'';
   };
 
   packageName = "local-time";
@@ -19,12 +21,12 @@ rec {
 }
 /* (SYSTEM local-time DESCRIPTION
     A library for manipulating dates and times, based on a paper by Erik Naggum
-    SHA256 05axwla93m5jml9lw6ljwzjhcl8pshfzxyqkvyj1w5l9klh569p9 URL
-    http://beta.quicklisp.org/archive/local-time/2017-07-25/local-time-20170725-git.tgz
-    MD5 77a79ed1036bc3547f5174f2256c8e93 NAME local-time FILENAME local-time
+    SHA256 1i8km0ndqk1kx914n0chi4c3kkk6m0zk0kplh87fgzwn4lh79rpr URL
+    http://beta.quicklisp.org/archive/local-time/2018-01-31/local-time-20180131-git.tgz
+    MD5 61982a1f2b29793e00369d9c2b6d1b12 NAME local-time FILENAME local-time
     DEPS
     ((NAME alexandria FILENAME alexandria)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
-     (NAME cl-fad FILENAME cl-fad))
-    DEPENDENCIES (alexandria bordeaux-threads cl-fad) VERSION 20170725-git
-    SIBLINGS (cl-postgres+local-time local-time.test) PARASITES NIL) */
+     (NAME cl-fad FILENAME cl-fad) (NAME stefil FILENAME stefil))
+    DEPENDENCIES (alexandria bordeaux-threads cl-fad stefil) VERSION
+    20180131-git SIBLINGS (cl-postgres+local-time) PARASITES (local-time/test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/lquery.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/lquery.nix
index b8592e12490b..1ca094d139db 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/lquery.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/lquery.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''lquery'';
-  version = ''20170630-git'';
+  version = ''20180131-git'';
 
   description = ''A library to allow jQuery-like HTML/DOM manipulation.'';
 
-  deps = [ args."array-utils" args."clss" args."form-fiddle" args."plump" ];
+  deps = [ args."array-utils" args."clss" args."documentation-utils" args."form-fiddle" args."plump" args."trivial-indent" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/lquery/2017-06-30/lquery-20170630-git.tgz'';
-    sha256 = ''19lpzjidg31lw61b78vdsqzrsdw2js4a9s7zzr5049jpzbspszjm'';
+    url = ''http://beta.quicklisp.org/archive/lquery/2018-01-31/lquery-20180131-git.tgz'';
+    sha256 = ''1v5mmdx7a1ngydkcs3c5anmqrl0jxc52b8jisc2f0b5k0j1kgmm9'';
   };
 
   packageName = "lquery";
@@ -19,10 +19,13 @@ rec {
 }
 /* (SYSTEM lquery DESCRIPTION
     A library to allow jQuery-like HTML/DOM manipulation. SHA256
-    19lpzjidg31lw61b78vdsqzrsdw2js4a9s7zzr5049jpzbspszjm URL
-    http://beta.quicklisp.org/archive/lquery/2017-06-30/lquery-20170630-git.tgz
-    MD5 aeb03cb5174d682092683da488531a9c NAME lquery FILENAME lquery DEPS
+    1v5mmdx7a1ngydkcs3c5anmqrl0jxc52b8jisc2f0b5k0j1kgmm9 URL
+    http://beta.quicklisp.org/archive/lquery/2018-01-31/lquery-20180131-git.tgz
+    MD5 07e92aad32c4d12c4699956b57dbc9b8 NAME lquery FILENAME lquery DEPS
     ((NAME array-utils FILENAME array-utils) (NAME clss FILENAME clss)
-     (NAME form-fiddle FILENAME form-fiddle) (NAME plump FILENAME plump))
-    DEPENDENCIES (array-utils clss form-fiddle plump) VERSION 20170630-git
-    SIBLINGS (lquery-test) PARASITES NIL) */
+     (NAME documentation-utils FILENAME documentation-utils)
+     (NAME form-fiddle FILENAME form-fiddle) (NAME plump FILENAME plump)
+     (NAME trivial-indent FILENAME trivial-indent))
+    DEPENDENCIES
+    (array-utils clss documentation-utils form-fiddle plump trivial-indent)
+    VERSION 20180131-git SIBLINGS (lquery-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/marshal.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/marshal.nix
index b45b0a5da70c..4d17bd6341f2 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/marshal.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/marshal.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''marshal'';
-  version = ''cl-20170124-git'';
+  version = ''cl-20170830-git'';
 
   description = ''marshal: Simple (de)serialization of Lisp datastructures.'';
 
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/cl-marshal/2017-01-24/cl-marshal-20170124-git.tgz'';
-    sha256 = ''0z43m3jspl4c4fcbbxm58hxd9k69308pyijgj7grmq6mirkq664d'';
+    url = ''http://beta.quicklisp.org/archive/cl-marshal/2017-08-30/cl-marshal-20170830-git.tgz'';
+    sha256 = ''1yirhxyizfxsvsrmbh2dipzzlq09afahzmi2zlsbbv6cvijxnisp'';
   };
 
   packageName = "marshal";
@@ -19,7 +19,8 @@ rec {
 }
 /* (SYSTEM marshal DESCRIPTION
     marshal: Simple (de)serialization of Lisp datastructures. SHA256
-    0z43m3jspl4c4fcbbxm58hxd9k69308pyijgj7grmq6mirkq664d URL
-    http://beta.quicklisp.org/archive/cl-marshal/2017-01-24/cl-marshal-20170124-git.tgz
-    MD5 ebde1b0f1c1abeb409380884cc665351 NAME marshal FILENAME marshal DEPS NIL
-    DEPENDENCIES NIL VERSION cl-20170124-git SIBLINGS NIL PARASITES NIL) */
+    1yirhxyizfxsvsrmbh2dipzzlq09afahzmi2zlsbbv6cvijxnisp URL
+    http://beta.quicklisp.org/archive/cl-marshal/2017-08-30/cl-marshal-20170830-git.tgz
+    MD5 54bce031cdb215cd7624fdf3265b9bec NAME marshal FILENAME marshal DEPS NIL
+    DEPENDENCIES NIL VERSION cl-20170830-git SIBLINGS (marshal-tests) PARASITES
+    NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/metabang-bind.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/metabang-bind.nix
index ac12468c8804..d72e0839d1e8 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/metabang-bind.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/metabang-bind.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''metabang-bind'';
-  version = ''20170124-git'';
+  version = ''20171130-git'';
 
   description = ''Bind is a macro that generalizes multiple-value-bind, let, let*, destructuring-bind, structure and slot accessors, and a whole lot more.'';
 
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/metabang-bind/2017-01-24/metabang-bind-20170124-git.tgz'';
-    sha256 = ''1xyiyrc9c02ylg6b749h2ihn6922kb179x7k338dmglf4mpyqxwc'';
+    url = ''http://beta.quicklisp.org/archive/metabang-bind/2017-11-30/metabang-bind-20171130-git.tgz'';
+    sha256 = ''0mjcg4281qljjwzq80r9j7nhvccf5k1069kzk2vljvvm2ai21j1a'';
   };
 
   packageName = "metabang-bind";
@@ -19,8 +19,8 @@ rec {
 }
 /* (SYSTEM metabang-bind DESCRIPTION
     Bind is a macro that generalizes multiple-value-bind, let, let*, destructuring-bind, structure and slot accessors, and a whole lot more.
-    SHA256 1xyiyrc9c02ylg6b749h2ihn6922kb179x7k338dmglf4mpyqxwc URL
-    http://beta.quicklisp.org/archive/metabang-bind/2017-01-24/metabang-bind-20170124-git.tgz
-    MD5 20c6a434308598ad7fa224d99f3bcbf6 NAME metabang-bind FILENAME
-    metabang-bind DEPS NIL DEPENDENCIES NIL VERSION 20170124-git SIBLINGS
+    SHA256 0mjcg4281qljjwzq80r9j7nhvccf5k1069kzk2vljvvm2ai21j1a URL
+    http://beta.quicklisp.org/archive/metabang-bind/2017-11-30/metabang-bind-20171130-git.tgz
+    MD5 dfd06d3929c2f48ccbe1d00cdf9995a7 NAME metabang-bind FILENAME
+    metabang-bind DEPS NIL DEPENDENCIES NIL VERSION 20171130-git SIBLINGS
     (metabang-bind-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/named-readtables.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/named-readtables.nix
index a239fe7e32b5..82d06b1c93b2 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/named-readtables.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/named-readtables.nix
@@ -1,7 +1,9 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''named-readtables'';
-  version = ''20170124-git'';
+  version = ''20180131-git'';
+
+  parasites = [ "named-readtables/test" ];
 
   description = ''Library that creates a namespace for named readtable
   akin to the namespace of packages.'';
@@ -9,8 +11,8 @@ rec {
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/named-readtables/2017-01-24/named-readtables-20170124-git.tgz'';
-    sha256 = ''1j0drddahdjab40dd9v9qy92xbvzwgbk6y3hv990sdp9f8ac1q45'';
+    url = ''http://beta.quicklisp.org/archive/named-readtables/2018-01-31/named-readtables-20180131-git.tgz'';
+    sha256 = ''1fhygm2q75m6my6appxmx097l7zlr3qxbgzbpa2mf9pr1qzwrgg5'';
   };
 
   packageName = "named-readtables";
@@ -21,8 +23,8 @@ rec {
 /* (SYSTEM named-readtables DESCRIPTION
     Library that creates a namespace for named readtable
   akin to the namespace of packages.
-    SHA256 1j0drddahdjab40dd9v9qy92xbvzwgbk6y3hv990sdp9f8ac1q45 URL
-    http://beta.quicklisp.org/archive/named-readtables/2017-01-24/named-readtables-20170124-git.tgz
-    MD5 1237a07f90e29939e48b595eaad2bd82 NAME named-readtables FILENAME
-    named-readtables DEPS NIL DEPENDENCIES NIL VERSION 20170124-git SIBLINGS
-    NIL PARASITES NIL) */
+    SHA256 1fhygm2q75m6my6appxmx097l7zlr3qxbgzbpa2mf9pr1qzwrgg5 URL
+    http://beta.quicklisp.org/archive/named-readtables/2018-01-31/named-readtables-20180131-git.tgz
+    MD5 46db18ba947dc0aba14c76471604448d NAME named-readtables FILENAME
+    named-readtables DEPS NIL DEPENDENCIES NIL VERSION 20180131-git SIBLINGS
+    NIL PARASITES (named-readtables/test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/nibbles.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/nibbles.nix
index fbcfbe29164d..9275e5583f56 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/nibbles.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/nibbles.nix
@@ -1,17 +1,17 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''nibbles'';
-  version = ''20170403-git'';
+  version = ''20171130-git'';
 
-  parasites = [ "nibbles-tests" ];
+  parasites = [ "nibbles/tests" ];
 
   description = ''A library for accessing octet-addressed blocks of data in big- and little-endian orders'';
 
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/nibbles/2017-04-03/nibbles-20170403-git.tgz'';
-    sha256 = ''0bg7jwhqhm3qmpzk21gjv50sl0grdn68d770cqfs7in62ny35lk4'';
+    url = ''http://beta.quicklisp.org/archive/nibbles/2017-11-30/nibbles-20171130-git.tgz'';
+    sha256 = ''05ykyniak1m0whr7pnbhg53yblr5mny0crmh72bmgnvpmkm345zn'';
   };
 
   packageName = "nibbles";
@@ -21,8 +21,8 @@ rec {
 }
 /* (SYSTEM nibbles DESCRIPTION
     A library for accessing octet-addressed blocks of data in big- and little-endian orders
-    SHA256 0bg7jwhqhm3qmpzk21gjv50sl0grdn68d770cqfs7in62ny35lk4 URL
-    http://beta.quicklisp.org/archive/nibbles/2017-04-03/nibbles-20170403-git.tgz
-    MD5 5683a0a5510860a036b2a272036cda87 NAME nibbles FILENAME nibbles DEPS NIL
-    DEPENDENCIES NIL VERSION 20170403-git SIBLINGS NIL PARASITES
-    (nibbles-tests)) */
+    SHA256 05ykyniak1m0whr7pnbhg53yblr5mny0crmh72bmgnvpmkm345zn URL
+    http://beta.quicklisp.org/archive/nibbles/2017-11-30/nibbles-20171130-git.tgz
+    MD5 edce3702da9979fca3e40a4594fe36e6 NAME nibbles FILENAME nibbles DEPS NIL
+    DEPENDENCIES NIL VERSION 20171130-git SIBLINGS NIL PARASITES
+    (nibbles/tests)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/pgloader.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/pgloader.nix
index 07baf1539bc9..da9fe306276f 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/pgloader.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/pgloader.nix
@@ -5,10 +5,10 @@ rec {
 
   description = ''Load data into PostgreSQL'';
 
-  deps = [ args."abnf" args."alexandria" args."anaphora" args."asdf-system-connections" args."babel" args."bordeaux-threads" args."cffi" args."chipz" args."chunga" args."cl+ssl" args."cl-base64" args."cl-containers" args."cl-csv" args."cl-fad" args."cl-interpol" args."cl-log" args."cl-markdown" args."cl-postgres" args."cl-ppcre" args."cl-unicode" args."cl-utilities" args."closer-mop" args."command-line-arguments" args."db3" args."drakma" args."dynamic-classes" args."esrap" args."flexi-streams" args."garbage-pools" args."ieee-floats" args."ironclad" args."iterate" args."ixf" args."list-of" args."local-time" args."lparallel" args."md5" args."metabang-bind" args."metatilities-base" args."mssql" args."nibbles" args."parse-number" args."postmodern" args."puri" args."py-configparser" args."qmynd" args."quri" args."s-sql" args."simple-date" args."split-sequence" args."sqlite" args."trivial-backtrace" args."trivial-features" args."trivial-gray-streams" args."trivial-utf-8" args."uiop" args."usocket" args."uuid" ];
+  deps = [ args."abnf" args."alexandria" args."anaphora" args."asdf-finalizers" args."asdf-system-connections" args."babel" args."bordeaux-threads" args."cffi" args."chipz" args."chunga" args."cl+ssl" args."cl-base64" args."cl-containers" args."cl-csv" args."cl-fad" args."cl-interpol" args."cl-log" args."cl-markdown" args."cl-postgres" args."cl-ppcre" args."cl-unicode" args."cl-utilities" args."closer-mop" args."command-line-arguments" args."db3" args."drakma" args."dynamic-classes" args."esrap" args."flexi-streams" args."garbage-pools" args."ieee-floats" args."ironclad" args."iterate" args."ixf" args."list-of" args."local-time" args."lparallel" args."md5" args."metabang-bind" args."metatilities-base" args."mssql" args."nibbles" args."parse-number" args."postmodern" args."puri" args."py-configparser" args."qmynd" args."quri" args."s-sql" args."salza2" args."simple-date" args."split-sequence" args."sqlite" args."trivial-backtrace" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."trivial-utf-8" args."uiop" args."usocket" args."uuid" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/pgloader/2017-07-25/pgloader-v3.4.1.tgz'';
+    url = ''http://beta.quicklisp.org/archive/pgloader/2017-08-30/pgloader-v3.4.1.tgz'';
     sha256 = ''1z6p7dz1ir9cg4gl1vkvbc1f7pv1yfv1jgwjkw29v57fdg4faz9v'';
   };
 
@@ -19,10 +19,11 @@ rec {
 }
 /* (SYSTEM pgloader DESCRIPTION Load data into PostgreSQL SHA256
     1z6p7dz1ir9cg4gl1vkvbc1f7pv1yfv1jgwjkw29v57fdg4faz9v URL
-    http://beta.quicklisp.org/archive/pgloader/2017-07-25/pgloader-v3.4.1.tgz
+    http://beta.quicklisp.org/archive/pgloader/2017-08-30/pgloader-v3.4.1.tgz
     MD5 6741f8e7d2d416942d5c4a1971576d33 NAME pgloader FILENAME pgloader DEPS
     ((NAME abnf FILENAME abnf) (NAME alexandria FILENAME alexandria)
      (NAME anaphora FILENAME anaphora)
+     (NAME asdf-finalizers FILENAME asdf-finalizers)
      (NAME asdf-system-connections FILENAME asdf-system-connections)
      (NAME babel FILENAME babel)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
@@ -52,22 +53,24 @@ rec {
      (NAME postmodern FILENAME postmodern) (NAME puri FILENAME puri)
      (NAME py-configparser FILENAME py-configparser)
      (NAME qmynd FILENAME qmynd) (NAME quri FILENAME quri)
-     (NAME s-sql FILENAME s-sql) (NAME simple-date FILENAME simple-date)
+     (NAME s-sql FILENAME s-sql) (NAME salza2 FILENAME salza2)
+     (NAME simple-date FILENAME simple-date)
      (NAME split-sequence FILENAME split-sequence)
      (NAME sqlite FILENAME sqlite)
      (NAME trivial-backtrace FILENAME trivial-backtrace)
      (NAME trivial-features FILENAME trivial-features)
+     (NAME trivial-garbage FILENAME trivial-garbage)
      (NAME trivial-gray-streams FILENAME trivial-gray-streams)
      (NAME trivial-utf-8 FILENAME trivial-utf-8) (NAME uiop FILENAME uiop)
      (NAME usocket FILENAME usocket) (NAME uuid FILENAME uuid))
     DEPENDENCIES
-    (abnf alexandria anaphora asdf-system-connections babel bordeaux-threads
-     cffi chipz chunga cl+ssl cl-base64 cl-containers cl-csv cl-fad cl-interpol
-     cl-log cl-markdown cl-postgres cl-ppcre cl-unicode cl-utilities closer-mop
-     command-line-arguments db3 drakma dynamic-classes esrap flexi-streams
-     garbage-pools ieee-floats ironclad iterate ixf list-of local-time
-     lparallel md5 metabang-bind metatilities-base mssql nibbles parse-number
-     postmodern puri py-configparser qmynd quri s-sql simple-date
-     split-sequence sqlite trivial-backtrace trivial-features
-     trivial-gray-streams trivial-utf-8 uiop usocket uuid)
+    (abnf alexandria anaphora asdf-finalizers asdf-system-connections babel
+     bordeaux-threads cffi chipz chunga cl+ssl cl-base64 cl-containers cl-csv
+     cl-fad cl-interpol cl-log cl-markdown cl-postgres cl-ppcre cl-unicode
+     cl-utilities closer-mop command-line-arguments db3 drakma dynamic-classes
+     esrap flexi-streams garbage-pools ieee-floats ironclad iterate ixf list-of
+     local-time lparallel md5 metabang-bind metatilities-base mssql nibbles
+     parse-number postmodern puri py-configparser qmynd quri s-sql salza2
+     simple-date split-sequence sqlite trivial-backtrace trivial-features
+     trivial-garbage trivial-gray-streams trivial-utf-8 uiop usocket uuid)
     VERSION v3.4.1 SIBLINGS NIL PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/plump.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/plump.nix
index 763677c677c2..02bb16e0b78d 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/plump.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/plump.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''plump'';
-  version = ''20170725-git'';
+  version = ''20180131-git'';
 
   description = ''An XML / XHTML / HTML parser that aims to be as lenient as possible.'';
 
-  deps = [ args."array-utils" args."plump-dom" args."plump-lexer" args."plump-parser" args."trivial-indent" ];
+  deps = [ args."array-utils" args."documentation-utils" args."trivial-indent" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/plump/2017-07-25/plump-20170725-git.tgz'';
-    sha256 = ''118ashy1sqi666k18fqjkkzzqcak1f1aq93vm2hiadbdvrwn9s72'';
+    url = ''http://beta.quicklisp.org/archive/plump/2018-01-31/plump-20180131-git.tgz'';
+    sha256 = ''12kawjp88kh7cl2f3s2rg3fp3m09pr477nl9nxcfhmfkbrprslis'';
   };
 
   packageName = "plump";
@@ -19,14 +19,11 @@ rec {
 }
 /* (SYSTEM plump DESCRIPTION
     An XML / XHTML / HTML parser that aims to be as lenient as possible. SHA256
-    118ashy1sqi666k18fqjkkzzqcak1f1aq93vm2hiadbdvrwn9s72 URL
-    http://beta.quicklisp.org/archive/plump/2017-07-25/plump-20170725-git.tgz
-    MD5 e5e92dd177711a14753ee86961710458 NAME plump FILENAME plump DEPS
+    12kawjp88kh7cl2f3s2rg3fp3m09pr477nl9nxcfhmfkbrprslis URL
+    http://beta.quicklisp.org/archive/plump/2018-01-31/plump-20180131-git.tgz
+    MD5 b9e7e174b2322b6547bca7beddda6f3b NAME plump FILENAME plump DEPS
     ((NAME array-utils FILENAME array-utils)
-     (NAME plump-dom FILENAME plump-dom)
-     (NAME plump-lexer FILENAME plump-lexer)
-     (NAME plump-parser FILENAME plump-parser)
+     (NAME documentation-utils FILENAME documentation-utils)
      (NAME trivial-indent FILENAME trivial-indent))
-    DEPENDENCIES
-    (array-utils plump-dom plump-lexer plump-parser trivial-indent) VERSION
-    20170725-git SIBLINGS (plump-dom plump-lexer plump-parser) PARASITES NIL) */
+    DEPENDENCIES (array-utils documentation-utils trivial-indent) VERSION
+    20180131-git SIBLINGS (plump-dom plump-lexer plump-parser) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/postmodern.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/postmodern.nix
index bbc0ad6b15bd..441f78171098 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/postmodern.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/postmodern.nix
@@ -1,17 +1,17 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''postmodern'';
-  version = ''20170403-git'';
+  version = ''20180131-git'';
 
-  parasites = [ "postmodern-tests" ];
+  parasites = [ "postmodern/tests" ];
 
   description = ''PostgreSQL programming API'';
 
-  deps = [ args."alexandria" args."bordeaux-threads" args."cl-postgres" args."cl-postgres-tests" args."closer-mop" args."fiveam" args."md5" args."s-sql" args."simple-date" args."simple-date-postgres-glue" ];
+  deps = [ args."alexandria" args."bordeaux-threads" args."cl-postgres" args."cl-postgres_slash_tests" args."closer-mop" args."fiveam" args."md5" args."s-sql" args."simple-date" args."simple-date_slash_postgres-glue" args."split-sequence" args."usocket" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/postmodern/2017-04-03/postmodern-20170403-git.tgz'';
-    sha256 = ''1pklmp0y0falrmbxll79drrcrlgslasavdym5r45m8kkzi1zpv9p'';
+    url = ''http://beta.quicklisp.org/archive/postmodern/2018-01-31/postmodern-20180131-git.tgz'';
+    sha256 = ''0mz5pm759py1iscfn44c00dal2fijkyp5479fpx9l6i7wrdx2mki'';
   };
 
   packageName = "postmodern";
@@ -20,20 +20,23 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM postmodern DESCRIPTION PostgreSQL programming API SHA256
-    1pklmp0y0falrmbxll79drrcrlgslasavdym5r45m8kkzi1zpv9p URL
-    http://beta.quicklisp.org/archive/postmodern/2017-04-03/postmodern-20170403-git.tgz
-    MD5 7a4145a0a5ff5bcb7a4bf29b5c2915d2 NAME postmodern FILENAME postmodern
+    0mz5pm759py1iscfn44c00dal2fijkyp5479fpx9l6i7wrdx2mki URL
+    http://beta.quicklisp.org/archive/postmodern/2018-01-31/postmodern-20180131-git.tgz
+    MD5 a3b7bf25eb342cd49fe144fcd7ddcb16 NAME postmodern FILENAME postmodern
     DEPS
     ((NAME alexandria FILENAME alexandria)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
      (NAME cl-postgres FILENAME cl-postgres)
-     (NAME cl-postgres-tests FILENAME cl-postgres-tests)
+     (NAME cl-postgres/tests FILENAME cl-postgres_slash_tests)
      (NAME closer-mop FILENAME closer-mop) (NAME fiveam FILENAME fiveam)
      (NAME md5 FILENAME md5) (NAME s-sql FILENAME s-sql)
      (NAME simple-date FILENAME simple-date)
-     (NAME simple-date-postgres-glue FILENAME simple-date-postgres-glue))
+     (NAME simple-date/postgres-glue FILENAME simple-date_slash_postgres-glue)
+     (NAME split-sequence FILENAME split-sequence)
+     (NAME usocket FILENAME usocket))
     DEPENDENCIES
-    (alexandria bordeaux-threads cl-postgres cl-postgres-tests closer-mop
-     fiveam md5 s-sql simple-date simple-date-postgres-glue)
-    VERSION 20170403-git SIBLINGS (cl-postgres s-sql simple-date) PARASITES
-    (postmodern-tests)) */
+    (alexandria bordeaux-threads cl-postgres cl-postgres/tests closer-mop
+     fiveam md5 s-sql simple-date simple-date/postgres-glue split-sequence
+     usocket)
+    VERSION 20180131-git SIBLINGS (cl-postgres s-sql simple-date) PARASITES
+    (postmodern/tests)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/prove.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/prove.nix
index 7815efa4ecd3..a1542dc13cf6 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/prove.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/prove.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''prove'';
-  version = ''20170403-git'';
+  version = ''20171130-git'';
 
   description = '''';
 
   deps = [ args."alexandria" args."anaphora" args."cl-ansi-text" args."cl-colors" args."cl-ppcre" args."let-plus" args."uiop" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/prove/2017-04-03/prove-20170403-git.tgz'';
-    sha256 = ''091xxkn9zj22c4gmm8x714k29bs4j0j7akppwh55zjsmrxdhqcpl'';
+    url = ''http://beta.quicklisp.org/archive/prove/2017-11-30/prove-20171130-git.tgz'';
+    sha256 = ''13dmnnlk3r9fxxcvk6sqq8m0ifv9y80zgp1wg63nv1ykwdi7kyar'';
   };
 
   packageName = "prove";
@@ -18,13 +18,13 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM prove DESCRIPTION NIL SHA256
-    091xxkn9zj22c4gmm8x714k29bs4j0j7akppwh55zjsmrxdhqcpl URL
-    http://beta.quicklisp.org/archive/prove/2017-04-03/prove-20170403-git.tgz
-    MD5 063b615692c8711d2392204ecf1b37b7 NAME prove FILENAME prove DEPS
+    13dmnnlk3r9fxxcvk6sqq8m0ifv9y80zgp1wg63nv1ykwdi7kyar URL
+    http://beta.quicklisp.org/archive/prove/2017-11-30/prove-20171130-git.tgz
+    MD5 630df4367537f799570be40242f8ed52 NAME prove FILENAME prove DEPS
     ((NAME alexandria FILENAME alexandria) (NAME anaphora FILENAME anaphora)
      (NAME cl-ansi-text FILENAME cl-ansi-text)
      (NAME cl-colors FILENAME cl-colors) (NAME cl-ppcre FILENAME cl-ppcre)
      (NAME let-plus FILENAME let-plus) (NAME uiop FILENAME uiop))
     DEPENDENCIES
     (alexandria anaphora cl-ansi-text cl-colors cl-ppcre let-plus uiop) VERSION
-    20170403-git SIBLINGS (cl-test-more prove-asdf prove-test) PARASITES NIL) */
+    20171130-git SIBLINGS (cl-test-more prove-asdf prove-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/py-configparser.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/py-configparser.nix
index 3b3d90d1a1e4..0eb4c0f5b9e6 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/py-configparser.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/py-configparser.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''py-configparser'';
-  version = ''20170725-svn'';
+  version = ''20170830-svn'';
 
   description = ''Common Lisp implementation of the Python ConfigParser module'';
 
   deps = [ args."parse-number" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/py-configparser/2017-07-25/py-configparser-20170725-svn.tgz'';
-    sha256 = ''08wfjlyhjqn54p3k0kv7ijsf72rsn4abdjnhd2bfkapr2a4jz6zr'';
+    url = ''http://beta.quicklisp.org/archive/py-configparser/2017-08-30/py-configparser-20170830-svn.tgz'';
+    sha256 = ''0lf062m6nrq61cxafi7jyfh3ianml1qqqzdfd5pm1wzakl2jqp9j'';
   };
 
   packageName = "py-configparser";
@@ -19,8 +19,8 @@ rec {
 }
 /* (SYSTEM py-configparser DESCRIPTION
     Common Lisp implementation of the Python ConfigParser module SHA256
-    08wfjlyhjqn54p3k0kv7ijsf72rsn4abdjnhd2bfkapr2a4jz6zr URL
-    http://beta.quicklisp.org/archive/py-configparser/2017-07-25/py-configparser-20170725-svn.tgz
-    MD5 3486092bb1d56be05dab16036f288a74 NAME py-configparser FILENAME
+    0lf062m6nrq61cxafi7jyfh3ianml1qqqzdfd5pm1wzakl2jqp9j URL
+    http://beta.quicklisp.org/archive/py-configparser/2017-08-30/py-configparser-20170830-svn.tgz
+    MD5 b6a9fc2a9c70760d6683cafe656f9e90 NAME py-configparser FILENAME
     py-configparser DEPS ((NAME parse-number FILENAME parse-number))
-    DEPENDENCIES (parse-number) VERSION 20170725-svn SIBLINGS NIL PARASITES NIL) */
+    DEPENDENCIES (parse-number) VERSION 20170830-svn SIBLINGS NIL PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/qmynd.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/qmynd.nix
index d6d853413c25..356c7ff68642 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/qmynd.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/qmynd.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''qmynd'';
-  version = ''20170630-git'';
+  version = ''20180131-git'';
 
   description = ''MySQL Native Driver'';
 
-  deps = [ args."babel" args."flexi-streams" args."ironclad" args."list-of" args."trivial-gray-streams" args."usocket" ];
+  deps = [ args."alexandria" args."asdf-finalizers" args."babel" args."bordeaux-threads" args."cffi" args."chipz" args."cl+ssl" args."flexi-streams" args."ironclad" args."list-of" args."nibbles" args."salza2" args."split-sequence" args."trivial-features" args."trivial-garbage" args."trivial-gray-streams" args."usocket" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/qmynd/2017-06-30/qmynd-20170630-git.tgz'';
-    sha256 = ''01rg2rm4n19f5g39z2gdjcfy68z7ir51r44524vzzs0x9na9y6bi'';
+    url = ''http://beta.quicklisp.org/archive/qmynd/2018-01-31/qmynd-20180131-git.tgz'';
+    sha256 = ''1ripapyrpzp36wsb2xf8w63nf0cjc13xh6xx296p8wgi01jwm61c'';
   };
 
   packageName = "qmynd";
@@ -18,13 +18,24 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM qmynd DESCRIPTION MySQL Native Driver SHA256
-    01rg2rm4n19f5g39z2gdjcfy68z7ir51r44524vzzs0x9na9y6bi URL
-    http://beta.quicklisp.org/archive/qmynd/2017-06-30/qmynd-20170630-git.tgz
-    MD5 64776472d1e0c4c0e41a1b4a2a24167e NAME qmynd FILENAME qmynd DEPS
-    ((NAME babel FILENAME babel) (NAME flexi-streams FILENAME flexi-streams)
+    1ripapyrpzp36wsb2xf8w63nf0cjc13xh6xx296p8wgi01jwm61c URL
+    http://beta.quicklisp.org/archive/qmynd/2018-01-31/qmynd-20180131-git.tgz
+    MD5 60177d28b1945234fd72760007194b3e NAME qmynd FILENAME qmynd DEPS
+    ((NAME alexandria FILENAME alexandria)
+     (NAME asdf-finalizers FILENAME asdf-finalizers)
+     (NAME babel FILENAME babel)
+     (NAME bordeaux-threads FILENAME bordeaux-threads)
+     (NAME cffi FILENAME cffi) (NAME chipz FILENAME chipz)
+     (NAME cl+ssl FILENAME cl+ssl) (NAME flexi-streams FILENAME flexi-streams)
      (NAME ironclad FILENAME ironclad) (NAME list-of FILENAME list-of)
+     (NAME nibbles FILENAME nibbles) (NAME salza2 FILENAME salza2)
+     (NAME split-sequence FILENAME split-sequence)
+     (NAME trivial-features FILENAME trivial-features)
+     (NAME trivial-garbage FILENAME trivial-garbage)
      (NAME trivial-gray-streams FILENAME trivial-gray-streams)
      (NAME usocket FILENAME usocket))
     DEPENDENCIES
-    (babel flexi-streams ironclad list-of trivial-gray-streams usocket) VERSION
-    20170630-git SIBLINGS (qmynd-test) PARASITES NIL) */
+    (alexandria asdf-finalizers babel bordeaux-threads cffi chipz cl+ssl
+     flexi-streams ironclad list-of nibbles salza2 split-sequence
+     trivial-features trivial-garbage trivial-gray-streams usocket)
+    VERSION 20180131-git SIBLINGS (qmynd-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/s-sql.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/s-sql.nix
index f75e890760e8..83d835fe2dd8 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/s-sql.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/s-sql.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''s-sql'';
-  version = ''postmodern-20170403-git'';
+  version = ''postmodern-20180131-git'';
 
   description = '''';
 
-  deps = [ args."cl-postgres" args."md5" ];
+  deps = [ args."cl-postgres" args."md5" args."split-sequence" args."usocket" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/postmodern/2017-04-03/postmodern-20170403-git.tgz'';
-    sha256 = ''1pklmp0y0falrmbxll79drrcrlgslasavdym5r45m8kkzi1zpv9p'';
+    url = ''http://beta.quicklisp.org/archive/postmodern/2018-01-31/postmodern-20180131-git.tgz'';
+    sha256 = ''0mz5pm759py1iscfn44c00dal2fijkyp5479fpx9l6i7wrdx2mki'';
   };
 
   packageName = "s-sql";
@@ -18,9 +18,12 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM s-sql DESCRIPTION NIL SHA256
-    1pklmp0y0falrmbxll79drrcrlgslasavdym5r45m8kkzi1zpv9p URL
-    http://beta.quicklisp.org/archive/postmodern/2017-04-03/postmodern-20170403-git.tgz
-    MD5 7a4145a0a5ff5bcb7a4bf29b5c2915d2 NAME s-sql FILENAME s-sql DEPS
-    ((NAME cl-postgres FILENAME cl-postgres) (NAME md5 FILENAME md5))
-    DEPENDENCIES (cl-postgres md5) VERSION postmodern-20170403-git SIBLINGS
-    (cl-postgres postmodern simple-date) PARASITES NIL) */
+    0mz5pm759py1iscfn44c00dal2fijkyp5479fpx9l6i7wrdx2mki URL
+    http://beta.quicklisp.org/archive/postmodern/2018-01-31/postmodern-20180131-git.tgz
+    MD5 a3b7bf25eb342cd49fe144fcd7ddcb16 NAME s-sql FILENAME s-sql DEPS
+    ((NAME cl-postgres FILENAME cl-postgres) (NAME md5 FILENAME md5)
+     (NAME split-sequence FILENAME split-sequence)
+     (NAME usocket FILENAME usocket))
+    DEPENDENCIES (cl-postgres md5 split-sequence usocket) VERSION
+    postmodern-20180131-git SIBLINGS (cl-postgres postmodern simple-date)
+    PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/simple-date.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/simple-date.nix
index 31e70992a4cf..d718b1293106 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/simple-date.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/simple-date.nix
@@ -1,17 +1,17 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''simple-date'';
-  version = ''postmodern-20170403-git'';
+  version = ''postmodern-20180131-git'';
 
-  parasites = [ "simple-date-postgres-glue" "simple-date-tests" ];
+  parasites = [ "simple-date/postgres-glue" "simple-date/tests" ];
 
   description = '''';
 
-  deps = [ args."cl-postgres" args."fiveam" args."md5" ];
+  deps = [ args."cl-postgres" args."fiveam" args."md5" args."usocket" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/postmodern/2017-04-03/postmodern-20170403-git.tgz'';
-    sha256 = ''1pklmp0y0falrmbxll79drrcrlgslasavdym5r45m8kkzi1zpv9p'';
+    url = ''http://beta.quicklisp.org/archive/postmodern/2018-01-31/postmodern-20180131-git.tgz'';
+    sha256 = ''0mz5pm759py1iscfn44c00dal2fijkyp5479fpx9l6i7wrdx2mki'';
   };
 
   packageName = "simple-date";
@@ -20,12 +20,12 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM simple-date DESCRIPTION NIL SHA256
-    1pklmp0y0falrmbxll79drrcrlgslasavdym5r45m8kkzi1zpv9p URL
-    http://beta.quicklisp.org/archive/postmodern/2017-04-03/postmodern-20170403-git.tgz
-    MD5 7a4145a0a5ff5bcb7a4bf29b5c2915d2 NAME simple-date FILENAME simple-date
+    0mz5pm759py1iscfn44c00dal2fijkyp5479fpx9l6i7wrdx2mki URL
+    http://beta.quicklisp.org/archive/postmodern/2018-01-31/postmodern-20180131-git.tgz
+    MD5 a3b7bf25eb342cd49fe144fcd7ddcb16 NAME simple-date FILENAME simple-date
     DEPS
     ((NAME cl-postgres FILENAME cl-postgres) (NAME fiveam FILENAME fiveam)
-     (NAME md5 FILENAME md5))
-    DEPENDENCIES (cl-postgres fiveam md5) VERSION postmodern-20170403-git
-    SIBLINGS (cl-postgres postmodern s-sql) PARASITES
-    (simple-date-postgres-glue simple-date-tests)) */
+     (NAME md5 FILENAME md5) (NAME usocket FILENAME usocket))
+    DEPENDENCIES (cl-postgres fiveam md5 usocket) VERSION
+    postmodern-20180131-git SIBLINGS (cl-postgres postmodern s-sql) PARASITES
+    (simple-date/postgres-glue simple-date/tests)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/static-vectors.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/static-vectors.nix
index e18c0c325f1c..b07feca16b00 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/static-vectors.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/static-vectors.nix
@@ -1,7 +1,7 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''static-vectors'';
-  version = ''v1.8.2'';
+  version = ''v1.8.3'';
 
   parasites = [ "static-vectors/test" ];
 
@@ -10,8 +10,8 @@ rec {
   deps = [ args."alexandria" args."babel" args."cffi" args."cffi-grovel" args."fiveam" args."trivial-features" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/static-vectors/2017-01-24/static-vectors-v1.8.2.tgz'';
-    sha256 = ''0p35f0wrnv46bmmxlviwpsbxnlnkmxwd3xp858lhf0dy52cyra1g'';
+    url = ''http://beta.quicklisp.org/archive/static-vectors/2017-10-19/static-vectors-v1.8.3.tgz'';
+    sha256 = ''084690v6xldb9xysgc4hg284j0j9ppxldz4gxwmfin1dzxq0g6xk'';
   };
 
   packageName = "static-vectors";
@@ -21,13 +21,13 @@ rec {
 }
 /* (SYSTEM static-vectors DESCRIPTION
     Create vectors allocated in static memory. SHA256
-    0p35f0wrnv46bmmxlviwpsbxnlnkmxwd3xp858lhf0dy52cyra1g URL
-    http://beta.quicklisp.org/archive/static-vectors/2017-01-24/static-vectors-v1.8.2.tgz
-    MD5 fd3ebe4e79a71c49e32ac87d6a1bcaf4 NAME static-vectors FILENAME
+    084690v6xldb9xysgc4hg284j0j9ppxldz4gxwmfin1dzxq0g6xk URL
+    http://beta.quicklisp.org/archive/static-vectors/2017-10-19/static-vectors-v1.8.3.tgz
+    MD5 cbad9e34904eedde61cd4cddcca6de29 NAME static-vectors FILENAME
     static-vectors DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME cffi FILENAME cffi) (NAME cffi-grovel FILENAME cffi-grovel)
      (NAME fiveam FILENAME fiveam)
      (NAME trivial-features FILENAME trivial-features))
     DEPENDENCIES (alexandria babel cffi cffi-grovel fiveam trivial-features)
-    VERSION v1.8.2 SIBLINGS NIL PARASITES (static-vectors/test)) */
+    VERSION v1.8.3 SIBLINGS NIL PARASITES (static-vectors/test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/stefil.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/stefil.nix
new file mode 100644
index 000000000000..0dca605c1fdf
--- /dev/null
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/stefil.nix
@@ -0,0 +1,29 @@
+args @ { fetchurl, ... }:
+rec {
+  baseName = ''stefil'';
+  version = ''20101107-darcs'';
+
+  parasites = [ "stefil-test" ];
+
+  description = ''Stefil - Simple Test Framework In Lisp'';
+
+  deps = [ args."alexandria" args."iterate" args."metabang-bind" args."swank" ];
+
+  src = fetchurl {
+    url = ''http://beta.quicklisp.org/archive/stefil/2010-11-07/stefil-20101107-darcs.tgz'';
+    sha256 = ''0d81js0p02plv7wy1640xmghb4s06gay76pqw2k3dnamkglcglz3'';
+  };
+
+  packageName = "stefil";
+
+  asdFilesToKeep = ["stefil.asd"];
+  overrides = x: x;
+}
+/* (SYSTEM stefil DESCRIPTION Stefil - Simple Test Framework In Lisp SHA256
+    0d81js0p02plv7wy1640xmghb4s06gay76pqw2k3dnamkglcglz3 URL
+    http://beta.quicklisp.org/archive/stefil/2010-11-07/stefil-20101107-darcs.tgz
+    MD5 8c56bc03e7679e4d42bb3bb3b101de80 NAME stefil FILENAME stefil DEPS
+    ((NAME alexandria FILENAME alexandria) (NAME iterate FILENAME iterate)
+     (NAME metabang-bind FILENAME metabang-bind) (NAME swank FILENAME swank))
+    DEPENDENCIES (alexandria iterate metabang-bind swank) VERSION
+    20101107-darcs SIBLINGS NIL PARASITES (stefil-test)) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/stumpwm.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/stumpwm.nix
index c7f845a4cf46..5191e2f336d8 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/stumpwm.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/stumpwm.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''stumpwm'';
-  version = ''20170725-git'';
+  version = ''20180131-git'';
 
   description = ''A tiling, keyboard driven window manager'';
 
   deps = [ args."alexandria" args."cl-ppcre" args."clx" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/stumpwm/2017-07-25/stumpwm-20170725-git.tgz'';
-    sha256 = ''1hb01zlm4rk2n9b8lfpiary94pmg6qkw84zg54ws1if7z1yd2ss5'';
+    url = ''http://beta.quicklisp.org/archive/stumpwm/2018-01-31/stumpwm-20180131-git.tgz'';
+    sha256 = ''1mlwgs0b8hd64wqk9qcv2x08zzfvbnn81fsdza7v5rcb8mx5abg0'';
   };
 
   packageName = "stumpwm";
@@ -18,10 +18,10 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM stumpwm DESCRIPTION A tiling, keyboard driven window manager SHA256
-    1hb01zlm4rk2n9b8lfpiary94pmg6qkw84zg54ws1if7z1yd2ss5 URL
-    http://beta.quicklisp.org/archive/stumpwm/2017-07-25/stumpwm-20170725-git.tgz
-    MD5 a7fb260c6572273c05b828299c0610ce NAME stumpwm FILENAME stumpwm DEPS
+    1mlwgs0b8hd64wqk9qcv2x08zzfvbnn81fsdza7v5rcb8mx5abg0 URL
+    http://beta.quicklisp.org/archive/stumpwm/2018-01-31/stumpwm-20180131-git.tgz
+    MD5 252427acf3f2dbc2a5522598c4e37be1 NAME stumpwm FILENAME stumpwm DEPS
     ((NAME alexandria FILENAME alexandria) (NAME cl-ppcre FILENAME cl-ppcre)
      (NAME clx FILENAME clx))
-    DEPENDENCIES (alexandria cl-ppcre clx) VERSION 20170725-git SIBLINGS NIL
+    DEPENDENCIES (alexandria cl-ppcre clx) VERSION 20180131-git SIBLINGS NIL
     PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/swank.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/swank.nix
index 21fcaddf5359..1359e13b949e 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/swank.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/swank.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''swank'';
-  version = ''slime-v2.19'';
+  version = ''slime-v2.20'';
 
   description = '''';
 
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/slime/2017-02-27/slime-v2.19.tgz'';
-    sha256 = ''1w3xq4kiy06wbmk2sf30saqgy1qa9v2llbi6bqy7hrm956yh6dza'';
+    url = ''http://beta.quicklisp.org/archive/slime/2017-08-30/slime-v2.20.tgz'';
+    sha256 = ''0rl2ymqxcfkbvwkd8zfhyaaz8v2a927gmv9c43ganxnq6y473c26'';
   };
 
   packageName = "swank";
@@ -18,7 +18,7 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM swank DESCRIPTION NIL SHA256
-    1w3xq4kiy06wbmk2sf30saqgy1qa9v2llbi6bqy7hrm956yh6dza URL
-    http://beta.quicklisp.org/archive/slime/2017-02-27/slime-v2.19.tgz MD5
-    7e1540ebb970db0f77b6e6cabb36ba41 NAME swank FILENAME swank DEPS NIL
-    DEPENDENCIES NIL VERSION slime-v2.19 SIBLINGS NIL PARASITES NIL) */
+    0rl2ymqxcfkbvwkd8zfhyaaz8v2a927gmv9c43ganxnq6y473c26 URL
+    http://beta.quicklisp.org/archive/slime/2017-08-30/slime-v2.20.tgz MD5
+    115188047b753ce1864586e114ecb46c NAME swank FILENAME swank DEPS NIL
+    DEPENDENCIES NIL VERSION slime-v2.20 SIBLINGS NIL PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/trivial-indent.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/trivial-indent.nix
index c0964c9731d0..4f4e1f812233 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/trivial-indent.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/trivial-indent.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''trivial-indent'';
-  version = ''20170630-git'';
+  version = ''20180131-git'';
 
   description = ''A very simple library to allow indentation hints for SWANK.'';
 
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/trivial-indent/2017-06-30/trivial-indent-20170630-git.tgz'';
-    sha256 = ''18zag7n2yfjx3x6nm8132cq8lz321i3f3zslb90j198wvpwyrnq7'';
+    url = ''http://beta.quicklisp.org/archive/trivial-indent/2018-01-31/trivial-indent-20180131-git.tgz'';
+    sha256 = ''1y6m9nrhj923zj95824w7vsciqhv9cq7sq5x519x2ik0jfcaqp8w'';
   };
 
   packageName = "trivial-indent";
@@ -19,8 +19,8 @@ rec {
 }
 /* (SYSTEM trivial-indent DESCRIPTION
     A very simple library to allow indentation hints for SWANK. SHA256
-    18zag7n2yfjx3x6nm8132cq8lz321i3f3zslb90j198wvpwyrnq7 URL
-    http://beta.quicklisp.org/archive/trivial-indent/2017-06-30/trivial-indent-20170630-git.tgz
-    MD5 9f11cc1014be3e3ae588a3cd07315be6 NAME trivial-indent FILENAME
-    trivial-indent DEPS NIL DEPENDENCIES NIL VERSION 20170630-git SIBLINGS NIL
+    1y6m9nrhj923zj95824w7vsciqhv9cq7sq5x519x2ik0jfcaqp8w URL
+    http://beta.quicklisp.org/archive/trivial-indent/2018-01-31/trivial-indent-20180131-git.tgz
+    MD5 a915258466d07465da1f71476bf59d12 NAME trivial-indent FILENAME
+    trivial-indent DEPS NIL DEPENDENCIES NIL VERSION 20180131-git SIBLINGS NIL
     PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/trivial-mimes.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/trivial-mimes.nix
index 080f854db43a..56bbb5838377 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/trivial-mimes.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/trivial-mimes.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''trivial-mimes'';
-  version = ''20170630-git'';
+  version = ''20180131-git'';
 
   description = ''Tiny library to detect mime types in files.'';
 
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/trivial-mimes/2017-06-30/trivial-mimes-20170630-git.tgz'';
-    sha256 = ''0rm667w7nfkcrfjqbb7blbdcrjxbr397a6nqmy35qq82fqjr4rvx'';
+    url = ''http://beta.quicklisp.org/archive/trivial-mimes/2018-01-31/trivial-mimes-20180131-git.tgz'';
+    sha256 = ''0wmnfiphrzr5br4mzds7lny36rqrdxv707r4frzygx7j0llrvs1b'';
   };
 
   packageName = "trivial-mimes";
@@ -19,8 +19,8 @@ rec {
 }
 /* (SYSTEM trivial-mimes DESCRIPTION
     Tiny library to detect mime types in files. SHA256
-    0rm667w7nfkcrfjqbb7blbdcrjxbr397a6nqmy35qq82fqjr4rvx URL
-    http://beta.quicklisp.org/archive/trivial-mimes/2017-06-30/trivial-mimes-20170630-git.tgz
-    MD5 5aecea17e102bd2dab7e71fecd1f8e44 NAME trivial-mimes FILENAME
-    trivial-mimes DEPS NIL DEPENDENCIES NIL VERSION 20170630-git SIBLINGS NIL
+    0wmnfiphrzr5br4mzds7lny36rqrdxv707r4frzygx7j0llrvs1b URL
+    http://beta.quicklisp.org/archive/trivial-mimes/2018-01-31/trivial-mimes-20180131-git.tgz
+    MD5 9c91e72a8ee2455f9c5cbba1f7d2fcef NAME trivial-mimes FILENAME
+    trivial-mimes DEPS NIL DEPENDENCIES NIL VERSION 20180131-git SIBLINGS NIL
     PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/uiop.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/uiop.nix
index 998681d02ab3..39c2060af027 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/uiop.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/uiop.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''uiop'';
-  version = ''3.2.1'';
+  version = ''3.3.1'';
 
   description = '''';
 
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/uiop/2017-06-30/uiop-3.2.1.tgz'';
-    sha256 = ''1zl661dkbg5clyl5fjj9466krk59xfdmmfzci5mj7n137m0zmf5v'';
+    url = ''http://beta.quicklisp.org/archive/uiop/2017-12-27/uiop-3.3.1.tgz'';
+    sha256 = ''0w9va40dr6l7fss9f7qlv7mp9f86sdjv5g2lz621a6wzi4911ghc'';
   };
 
   packageName = "uiop";
@@ -18,7 +18,7 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM uiop DESCRIPTION NIL SHA256
-    1zl661dkbg5clyl5fjj9466krk59xfdmmfzci5mj7n137m0zmf5v URL
-    http://beta.quicklisp.org/archive/uiop/2017-06-30/uiop-3.2.1.tgz MD5
-    3e9ef02ecf9005240b66552d85719700 NAME uiop FILENAME uiop DEPS NIL
-    DEPENDENCIES NIL VERSION 3.2.1 SIBLINGS (asdf-driver) PARASITES NIL) */
+    0w9va40dr6l7fss9f7qlv7mp9f86sdjv5g2lz621a6wzi4911ghc URL
+    http://beta.quicklisp.org/archive/uiop/2017-12-27/uiop-3.3.1.tgz MD5
+    7a90377c4fc96676d5fa5197d9e9ec11 NAME uiop FILENAME uiop DEPS NIL
+    DEPENDENCIES NIL VERSION 3.3.1 SIBLINGS (asdf-driver) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/woo.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/woo.nix
index 7e7e9b6acadc..fb483662df53 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/woo.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/woo.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''woo'';
-  version = ''20170725-git'';
+  version = ''20170830-git'';
 
   description = ''An asynchronous HTTP server written in Common Lisp'';
 
   deps = [ args."alexandria" args."babel" args."bordeaux-threads" args."cffi" args."cffi-grovel" args."cl-utilities" args."clack-socket" args."fast-http" args."fast-io" args."flexi-streams" args."lev" args."proc-parse" args."quri" args."smart-buffer" args."split-sequence" args."static-vectors" args."swap-bytes" args."trivial-features" args."trivial-gray-streams" args."trivial-utf-8" args."uiop" args."vom" args."xsubseq" ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/woo/2017-07-25/woo-20170725-git.tgz'';
-    sha256 = ''11cnqd058mjhkgxppsivbmd687429r4b62v7z5iav0wpha78qfgg'';
+    url = ''http://beta.quicklisp.org/archive/woo/2017-08-30/woo-20170830-git.tgz'';
+    sha256 = ''130hgfp08gchn0fkfablpf18hsdi1k4hrc3iny5c8m1phjlknchv'';
   };
 
   packageName = "woo";
@@ -18,9 +18,9 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM woo DESCRIPTION An asynchronous HTTP server written in Common Lisp
-    SHA256 11cnqd058mjhkgxppsivbmd687429r4b62v7z5iav0wpha78qfgg URL
-    http://beta.quicklisp.org/archive/woo/2017-07-25/woo-20170725-git.tgz MD5
-    bd901d8dfa7df3d19c6da73ea101f65b NAME woo FILENAME woo DEPS
+    SHA256 130hgfp08gchn0fkfablpf18hsdi1k4hrc3iny5c8m1phjlknchv URL
+    http://beta.quicklisp.org/archive/woo/2017-08-30/woo-20170830-git.tgz MD5
+    3f506a771b3d8f2c7fc97b049dcfdedf NAME woo FILENAME woo DEPS
     ((NAME alexandria FILENAME alexandria) (NAME babel FILENAME babel)
      (NAME bordeaux-threads FILENAME bordeaux-threads)
      (NAME cffi FILENAME cffi) (NAME cffi-grovel FILENAME cffi-grovel)
@@ -42,4 +42,4 @@ rec {
      clack-socket fast-http fast-io flexi-streams lev proc-parse quri
      smart-buffer split-sequence static-vectors swap-bytes trivial-features
      trivial-gray-streams trivial-utf-8 uiop vom xsubseq)
-    VERSION 20170725-git SIBLINGS (clack-handler-woo woo-test) PARASITES NIL) */
+    VERSION 20170830-git SIBLINGS (clack-handler-woo woo-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-output/xsubseq.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-output/xsubseq.nix
index 91598bf66626..b9ab71744c3a 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-output/xsubseq.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-output/xsubseq.nix
@@ -1,15 +1,15 @@
 args @ { fetchurl, ... }:
 rec {
   baseName = ''xsubseq'';
-  version = ''20150113-git'';
+  version = ''20170830-git'';
 
   description = ''Efficient way to manage "subseq"s in Common Lisp'';
 
   deps = [ ];
 
   src = fetchurl {
-    url = ''http://beta.quicklisp.org/archive/xsubseq/2015-01-13/xsubseq-20150113-git.tgz'';
-    sha256 = ''0ykjhi7pkqcwm00yzhqvngnx07hsvwbj0c72b08rj4dkngg8is5q'';
+    url = ''http://beta.quicklisp.org/archive/xsubseq/2017-08-30/xsubseq-20170830-git.tgz'';
+    sha256 = ''1am63wkha97hyvkqf4ydx3q07mqpa0chkx65znr7kmqi83a8waml'';
   };
 
   packageName = "xsubseq";
@@ -18,7 +18,7 @@ rec {
   overrides = x: x;
 }
 /* (SYSTEM xsubseq DESCRIPTION Efficient way to manage "subseq"s in Common Lisp
-    SHA256 0ykjhi7pkqcwm00yzhqvngnx07hsvwbj0c72b08rj4dkngg8is5q URL
-    http://beta.quicklisp.org/archive/xsubseq/2015-01-13/xsubseq-20150113-git.tgz
-    MD5 56f7a4ac1f05f10e7226e0e5b7b0bfa7 NAME xsubseq FILENAME xsubseq DEPS NIL
-    DEPENDENCIES NIL VERSION 20150113-git SIBLINGS (xsubseq-test) PARASITES NIL) */
+    SHA256 1am63wkha97hyvkqf4ydx3q07mqpa0chkx65znr7kmqi83a8waml URL
+    http://beta.quicklisp.org/archive/xsubseq/2017-08-30/xsubseq-20170830-git.tgz
+    MD5 960bb8f329649b6e4b820e065e6b38e8 NAME xsubseq FILENAME xsubseq DEPS NIL
+    DEPENDENCIES NIL VERSION 20170830-git SIBLINGS (xsubseq-test) PARASITES NIL) */
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-overrides.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-overrides.nix
index 4de4947c0733..9a7fb3e5d1b8 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-overrides.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-overrides.nix
@@ -139,4 +139,19 @@ $out/lib/common-lisp/query-fs"
       "cl-unification-lib.asd"
     ];
   };
+  simple-date = x: {
+    deps = with quicklisp-to-nix-packages; [
+      fiveam md5 usocket
+    ];
+    parasites = [
+      "simple-date/tests"
+    ];
+  };
+  cl-postgres = x: {
+    deps = pkgs.lib.filter (x: x.outPath != quicklisp-to-nix-packages.simple-date.outPath) x.deps;
+    parasites = (x.parasites or []) ++ [
+      "simple-date" "simple-date/postgres-glue"
+    ];
+    asdFilesToKeep = x.asdFilesToKeep ++ ["simple-date.asd"];
+  };
 }
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-systems.txt b/pkgs/development/lisp-modules/quicklisp-to-nix-systems.txt
index 49aa941094bd..ebf09c43a0e0 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix-systems.txt
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix-systems.txt
@@ -25,11 +25,13 @@ cl-dbi
 cl-emb
 cl-fuse
 cl-fuse-meta-fs
+cl-html-parse
 cl-json
 cl-l10n
 cl-libuv
 cl-mysql
 closer-mop
+closure-html
 cl-ppcre
 cl-ppcre-template
 cl-ppcre-unicode
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix.nix b/pkgs/development/lisp-modules/quicklisp-to-nix.nix
index 86817e14f553..e931c12f1e72 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix.nix
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix.nix
@@ -16,18 +16,7 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
-  "simple-date-postgres-glue" = quicklisp-to-nix-packages."simple-date";
-
-
-  "cl-postgres-tests" = quicklisp-to-nix-packages."cl-postgres";
-
-
-  "asdf-finalizers" = buildLispPackage
-    ((f: x: (x // (f x)))
-       (qlOverrides."asdf-finalizers" or (x: {}))
-       (import ./quicklisp-to-nix-output/asdf-finalizers.nix {
-         inherit fetchurl;
-       }));
+  "cl-postgres_slash_tests" = quicklisp-to-nix-packages."cl-postgres";
 
 
   "lisp-unit2" = buildLispPackage
@@ -73,6 +62,9 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
+  "simple-date_slash_postgres-glue" = quicklisp-to-nix-packages."simple-date";
+
+
   "unit-test" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."unit-test" or (x: {}))
@@ -81,26 +73,6 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
-  "map-set" = buildLispPackage
-    ((f: x: (x // (f x)))
-       (qlOverrides."map-set" or (x: {}))
-       (import ./quicklisp-to-nix-output/map-set.nix {
-         inherit fetchurl;
-       }));
-
-
-  "babel-streams" = buildLispPackage
-    ((f: x: (x // (f x)))
-       (qlOverrides."babel-streams" or (x: {}))
-       (import ./quicklisp-to-nix-output/babel-streams.nix {
-         inherit fetchurl;
-           "alexandria" = quicklisp-to-nix-packages."alexandria";
-           "babel" = quicklisp-to-nix-packages."babel";
-           "trivial-features" = quicklisp-to-nix-packages."trivial-features";
-           "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams";
-       }));
-
-
   "rt" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."rt" or (x: {}))
@@ -117,35 +89,6 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
-  "plump-parser" = buildLispPackage
-    ((f: x: (x // (f x)))
-       (qlOverrides."plump-parser" or (x: {}))
-       (import ./quicklisp-to-nix-output/plump-parser.nix {
-         inherit fetchurl;
-           "array-utils" = quicklisp-to-nix-packages."array-utils";
-           "plump-dom" = quicklisp-to-nix-packages."plump-dom";
-           "plump-lexer" = quicklisp-to-nix-packages."plump-lexer";
-           "trivial-indent" = quicklisp-to-nix-packages."trivial-indent";
-       }));
-
-
-  "plump-lexer" = buildLispPackage
-    ((f: x: (x // (f x)))
-       (qlOverrides."plump-lexer" or (x: {}))
-       (import ./quicklisp-to-nix-output/plump-lexer.nix {
-         inherit fetchurl;
-       }));
-
-
-  "plump-dom" = buildLispPackage
-    ((f: x: (x // (f x)))
-       (qlOverrides."plump-dom" or (x: {}))
-       (import ./quicklisp-to-nix-output/plump-dom.nix {
-         inherit fetchurl;
-           "array-utils" = quicklisp-to-nix-packages."array-utils";
-       }));
-
-
   "uuid" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."uuid" or (x: {}))
@@ -165,6 +108,7 @@ let quicklisp-to-nix-packages = rec {
            "cl-postgres" = quicklisp-to-nix-packages."cl-postgres";
            "fiveam" = quicklisp-to-nix-packages."fiveam";
            "md5" = quicklisp-to-nix-packages."md5";
+           "usocket" = quicklisp-to-nix-packages."usocket";
        }));
 
 
@@ -175,6 +119,8 @@ let quicklisp-to-nix-packages = rec {
          inherit fetchurl;
            "cl-postgres" = quicklisp-to-nix-packages."cl-postgres";
            "md5" = quicklisp-to-nix-packages."md5";
+           "split-sequence" = quicklisp-to-nix-packages."split-sequence";
+           "usocket" = quicklisp-to-nix-packages."usocket";
        }));
 
 
@@ -183,10 +129,21 @@ let quicklisp-to-nix-packages = rec {
        (qlOverrides."qmynd" or (x: {}))
        (import ./quicklisp-to-nix-output/qmynd.nix {
          inherit fetchurl;
+           "alexandria" = quicklisp-to-nix-packages."alexandria";
+           "asdf-finalizers" = quicklisp-to-nix-packages."asdf-finalizers";
            "babel" = quicklisp-to-nix-packages."babel";
+           "bordeaux-threads" = quicklisp-to-nix-packages."bordeaux-threads";
+           "cffi" = quicklisp-to-nix-packages."cffi";
+           "chipz" = quicklisp-to-nix-packages."chipz";
+           "cl+ssl" = quicklisp-to-nix-packages."cl+ssl";
            "flexi-streams" = quicklisp-to-nix-packages."flexi-streams";
            "ironclad" = quicklisp-to-nix-packages."ironclad";
            "list-of" = quicklisp-to-nix-packages."list-of";
+           "nibbles" = quicklisp-to-nix-packages."nibbles";
+           "salza2" = quicklisp-to-nix-packages."salza2";
+           "split-sequence" = quicklisp-to-nix-packages."split-sequence";
+           "trivial-features" = quicklisp-to-nix-packages."trivial-features";
+           "trivial-garbage" = quicklisp-to-nix-packages."trivial-garbage";
            "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams";
            "usocket" = quicklisp-to-nix-packages."usocket";
        }));
@@ -209,13 +166,15 @@ let quicklisp-to-nix-packages = rec {
            "alexandria" = quicklisp-to-nix-packages."alexandria";
            "bordeaux-threads" = quicklisp-to-nix-packages."bordeaux-threads";
            "cl-postgres" = quicklisp-to-nix-packages."cl-postgres";
-           "cl-postgres-tests" = quicklisp-to-nix-packages."cl-postgres-tests";
+           "cl-postgres_slash_tests" = quicklisp-to-nix-packages."cl-postgres_slash_tests";
            "closer-mop" = quicklisp-to-nix-packages."closer-mop";
            "fiveam" = quicklisp-to-nix-packages."fiveam";
            "md5" = quicklisp-to-nix-packages."md5";
            "s-sql" = quicklisp-to-nix-packages."s-sql";
            "simple-date" = quicklisp-to-nix-packages."simple-date";
-           "simple-date-postgres-glue" = quicklisp-to-nix-packages."simple-date-postgres-glue";
+           "simple-date_slash_postgres-glue" = quicklisp-to-nix-packages."simple-date_slash_postgres-glue";
+           "split-sequence" = quicklisp-to-nix-packages."split-sequence";
+           "usocket" = quicklisp-to-nix-packages."usocket";
        }));
 
 
@@ -358,6 +317,14 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
+  "asdf-finalizers" = buildLispPackage
+    ((f: x: (x // (f x)))
+       (qlOverrides."asdf-finalizers" or (x: {}))
+       (import ./quicklisp-to-nix-output/asdf-finalizers.nix {
+         inherit fetchurl;
+       }));
+
+
   "abnf" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."abnf" or (x: {}))
@@ -369,6 +336,18 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
+  "stefil" = buildLispPackage
+    ((f: x: (x // (f x)))
+       (qlOverrides."stefil" or (x: {}))
+       (import ./quicklisp-to-nix-output/stefil.nix {
+         inherit fetchurl;
+           "alexandria" = quicklisp-to-nix-packages."alexandria";
+           "iterate" = quicklisp-to-nix-packages."iterate";
+           "metabang-bind" = quicklisp-to-nix-packages."metabang-bind";
+           "swank" = quicklisp-to-nix-packages."swank";
+       }));
+
+
   "lack-component" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."lack-component" or (x: {}))
@@ -424,14 +403,6 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
-  "eos" = buildLispPackage
-    ((f: x: (x // (f x)))
-       (qlOverrides."eos" or (x: {}))
-       (import ./quicklisp-to-nix-output/eos.nix {
-         inherit fetchurl;
-       }));
-
-
   "xpath" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."xpath" or (x: {}))
@@ -547,6 +518,9 @@ let quicklisp-to-nix-packages = rec {
          inherit fetchurl;
            "fiveam" = quicklisp-to-nix-packages."fiveam";
            "md5" = quicklisp-to-nix-packages."md5";
+           "simple-date_slash_postgres-glue" = quicklisp-to-nix-packages."simple-date_slash_postgres-glue";
+           "split-sequence" = quicklisp-to-nix-packages."split-sequence";
+           "usocket" = quicklisp-to-nix-packages."usocket";
        }));
 
 
@@ -577,6 +551,15 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
+  "fiasco" = buildLispPackage
+    ((f: x: (x // (f x)))
+       (qlOverrides."fiasco" or (x: {}))
+       (import ./quicklisp-to-nix-output/fiasco.nix {
+         inherit fetchurl;
+           "alexandria" = quicklisp-to-nix-packages."alexandria";
+       }));
+
+
   "cl-paths" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."cl-paths" or (x: {}))
@@ -716,14 +699,6 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
-  "named-readtables" = buildLispPackage
-    ((f: x: (x // (f x)))
-       (qlOverrides."named-readtables" or (x: {}))
-       (import ./quicklisp-to-nix-output/named-readtables.nix {
-         inherit fetchurl;
-       }));
-
-
   "dbi" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."dbi" or (x: {}))
@@ -741,27 +716,6 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
-  "cl-annot" = buildLispPackage
-    ((f: x: (x // (f x)))
-       (qlOverrides."cl-annot" or (x: {}))
-       (import ./quicklisp-to-nix-output/cl-annot.nix {
-         inherit fetchurl;
-           "alexandria" = quicklisp-to-nix-packages."alexandria";
-       }));
-
-
-  "cl-fad" = buildLispPackage
-    ((f: x: (x // (f x)))
-       (qlOverrides."cl-fad" or (x: {}))
-       (import ./quicklisp-to-nix-output/cl-fad.nix {
-         inherit fetchurl;
-           "alexandria" = quicklisp-to-nix-packages."alexandria";
-           "bordeaux-threads" = quicklisp-to-nix-packages."bordeaux-threads";
-           "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre";
-           "unit-test" = quicklisp-to-nix-packages."unit-test";
-       }));
-
-
   "lift" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."lift" or (x: {}))
@@ -824,14 +778,6 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
-  "trivial-gray-streams" = buildLispPackage
-    ((f: x: (x // (f x)))
-       (qlOverrides."trivial-gray-streams" or (x: {}))
-       (import ./quicklisp-to-nix-output/trivial-gray-streams.nix {
-         inherit fetchurl;
-       }));
-
-
   "cffi-toolchain" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."cffi-toolchain" or (x: {}))
@@ -852,6 +798,22 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
+  "trivial-gray-streams" = buildLispPackage
+    ((f: x: (x // (f x)))
+       (qlOverrides."trivial-gray-streams" or (x: {}))
+       (import ./quicklisp-to-nix-output/trivial-gray-streams.nix {
+         inherit fetchurl;
+       }));
+
+
+  "named-readtables" = buildLispPackage
+    ((f: x: (x // (f x)))
+       (qlOverrides."named-readtables" or (x: {}))
+       (import ./quicklisp-to-nix-output/named-readtables.nix {
+         inherit fetchurl;
+       }));
+
+
   "myway" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."myway" or (x: {}))
@@ -868,6 +830,14 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
+  "map-set" = buildLispPackage
+    ((f: x: (x // (f x)))
+       (qlOverrides."map-set" or (x: {}))
+       (import ./quicklisp-to-nix-output/map-set.nix {
+         inherit fetchurl;
+       }));
+
+
   "do-urlencode" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."do-urlencode" or (x: {}))
@@ -911,6 +881,39 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
+  "cl-fad" = buildLispPackage
+    ((f: x: (x // (f x)))
+       (qlOverrides."cl-fad" or (x: {}))
+       (import ./quicklisp-to-nix-output/cl-fad.nix {
+         inherit fetchurl;
+           "alexandria" = quicklisp-to-nix-packages."alexandria";
+           "bordeaux-threads" = quicklisp-to-nix-packages."bordeaux-threads";
+           "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre";
+           "unit-test" = quicklisp-to-nix-packages."unit-test";
+       }));
+
+
+  "cl-annot" = buildLispPackage
+    ((f: x: (x // (f x)))
+       (qlOverrides."cl-annot" or (x: {}))
+       (import ./quicklisp-to-nix-output/cl-annot.nix {
+         inherit fetchurl;
+           "alexandria" = quicklisp-to-nix-packages."alexandria";
+       }));
+
+
+  "babel-streams" = buildLispPackage
+    ((f: x: (x // (f x)))
+       (qlOverrides."babel-streams" or (x: {}))
+       (import ./quicklisp-to-nix-output/babel-streams.nix {
+         inherit fetchurl;
+           "alexandria" = quicklisp-to-nix-packages."alexandria";
+           "babel" = quicklisp-to-nix-packages."babel";
+           "trivial-features" = quicklisp-to-nix-packages."trivial-features";
+           "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams";
+       }));
+
+
   "anaphora" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."anaphora" or (x: {}))
@@ -1213,9 +1216,7 @@ let quicklisp-to-nix-packages = rec {
        (import ./quicklisp-to-nix-output/plump.nix {
          inherit fetchurl;
            "array-utils" = quicklisp-to-nix-packages."array-utils";
-           "plump-dom" = quicklisp-to-nix-packages."plump-dom";
-           "plump-lexer" = quicklisp-to-nix-packages."plump-lexer";
-           "plump-parser" = quicklisp-to-nix-packages."plump-parser";
+           "documentation-utils" = quicklisp-to-nix-packages."documentation-utils";
            "trivial-indent" = quicklisp-to-nix-packages."trivial-indent";
        }));
 
@@ -1228,6 +1229,7 @@ let quicklisp-to-nix-packages = rec {
            "abnf" = quicklisp-to-nix-packages."abnf";
            "alexandria" = quicklisp-to-nix-packages."alexandria";
            "anaphora" = quicklisp-to-nix-packages."anaphora";
+           "asdf-finalizers" = quicklisp-to-nix-packages."asdf-finalizers";
            "asdf-system-connections" = quicklisp-to-nix-packages."asdf-system-connections";
            "babel" = quicklisp-to-nix-packages."babel";
            "bordeaux-threads" = quicklisp-to-nix-packages."bordeaux-threads";
@@ -1273,11 +1275,13 @@ let quicklisp-to-nix-packages = rec {
            "qmynd" = quicklisp-to-nix-packages."qmynd";
            "quri" = quicklisp-to-nix-packages."quri";
            "s-sql" = quicklisp-to-nix-packages."s-sql";
+           "salza2" = quicklisp-to-nix-packages."salza2";
            "simple-date" = quicklisp-to-nix-packages."simple-date";
            "split-sequence" = quicklisp-to-nix-packages."split-sequence";
            "sqlite" = quicklisp-to-nix-packages."sqlite";
            "trivial-backtrace" = quicklisp-to-nix-packages."trivial-backtrace";
            "trivial-features" = quicklisp-to-nix-packages."trivial-features";
+           "trivial-garbage" = quicklisp-to-nix-packages."trivial-garbage";
            "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams";
            "trivial-utf-8" = quicklisp-to-nix-packages."trivial-utf-8";
            "uiop" = quicklisp-to-nix-packages."uiop";
@@ -1358,8 +1362,10 @@ let quicklisp-to-nix-packages = rec {
          inherit fetchurl;
            "array-utils" = quicklisp-to-nix-packages."array-utils";
            "clss" = quicklisp-to-nix-packages."clss";
+           "documentation-utils" = quicklisp-to-nix-packages."documentation-utils";
            "form-fiddle" = quicklisp-to-nix-packages."form-fiddle";
            "plump" = quicklisp-to-nix-packages."plump";
+           "trivial-indent" = quicklisp-to-nix-packages."trivial-indent";
        }));
 
 
@@ -1371,6 +1377,7 @@ let quicklisp-to-nix-packages = rec {
            "alexandria" = quicklisp-to-nix-packages."alexandria";
            "bordeaux-threads" = quicklisp-to-nix-packages."bordeaux-threads";
            "cl-fad" = quicklisp-to-nix-packages."cl-fad";
+           "stefil" = quicklisp-to-nix-packages."stefil";
        }));
 
 
@@ -1460,7 +1467,7 @@ let quicklisp-to-nix-packages = rec {
        (qlOverrides."ieee-floats" or (x: {}))
        (import ./quicklisp-to-nix-output/ieee-floats.nix {
          inherit fetchurl;
-           "eos" = quicklisp-to-nix-packages."eos";
+           "fiveam" = quicklisp-to-nix-packages."fiveam";
        }));
 
 
@@ -1532,6 +1539,7 @@ let quicklisp-to-nix-packages = rec {
            "quri" = quicklisp-to-nix-packages."quri";
            "smart-buffer" = quicklisp-to-nix-packages."smart-buffer";
            "split-sequence" = quicklisp-to-nix-packages."split-sequence";
+           "trivial-features" = quicklisp-to-nix-packages."trivial-features";
            "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams";
            "xsubseq" = quicklisp-to-nix-packages."xsubseq";
        }));
@@ -1553,6 +1561,7 @@ let quicklisp-to-nix-packages = rec {
        (import ./quicklisp-to-nix-output/form-fiddle.nix {
          inherit fetchurl;
            "documentation-utils" = quicklisp-to-nix-packages."documentation-utils";
+           "trivial-indent" = quicklisp-to-nix-packages."trivial-indent";
        }));
 
 
@@ -1582,7 +1591,11 @@ let quicklisp-to-nix-packages = rec {
        (import ./quicklisp-to-nix-output/fast-io.nix {
          inherit fetchurl;
            "alexandria" = quicklisp-to-nix-packages."alexandria";
+           "babel" = quicklisp-to-nix-packages."babel";
+           "cffi" = quicklisp-to-nix-packages."cffi";
+           "cffi-grovel" = quicklisp-to-nix-packages."cffi-grovel";
            "static-vectors" = quicklisp-to-nix-packages."static-vectors";
+           "trivial-features" = quicklisp-to-nix-packages."trivial-features";
            "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams";
        }));
 
@@ -1595,8 +1608,11 @@ let quicklisp-to-nix-packages = rec {
            "alexandria" = quicklisp-to-nix-packages."alexandria";
            "babel" = quicklisp-to-nix-packages."babel";
            "cl-utilities" = quicklisp-to-nix-packages."cl-utilities";
+           "flexi-streams" = quicklisp-to-nix-packages."flexi-streams";
            "proc-parse" = quicklisp-to-nix-packages."proc-parse";
            "smart-buffer" = quicklisp-to-nix-packages."smart-buffer";
+           "trivial-features" = quicklisp-to-nix-packages."trivial-features";
+           "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams";
            "xsubseq" = quicklisp-to-nix-packages."xsubseq";
        }));
 
@@ -1638,6 +1654,10 @@ let quicklisp-to-nix-packages = rec {
        (qlOverrides."drakma" or (x: {}))
        (import ./quicklisp-to-nix-output/drakma.nix {
          inherit fetchurl;
+           "alexandria" = quicklisp-to-nix-packages."alexandria";
+           "babel" = quicklisp-to-nix-packages."babel";
+           "bordeaux-threads" = quicklisp-to-nix-packages."bordeaux-threads";
+           "cffi" = quicklisp-to-nix-packages."cffi";
            "chipz" = quicklisp-to-nix-packages."chipz";
            "chunga" = quicklisp-to-nix-packages."chunga";
            "cl+ssl" = quicklisp-to-nix-packages."cl+ssl";
@@ -1645,6 +1665,10 @@ let quicklisp-to-nix-packages = rec {
            "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre";
            "flexi-streams" = quicklisp-to-nix-packages."flexi-streams";
            "puri" = quicklisp-to-nix-packages."puri";
+           "split-sequence" = quicklisp-to-nix-packages."split-sequence";
+           "trivial-features" = quicklisp-to-nix-packages."trivial-features";
+           "trivial-garbage" = quicklisp-to-nix-packages."trivial-garbage";
+           "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams";
            "usocket" = quicklisp-to-nix-packages."usocket";
        }));
 
@@ -1667,6 +1691,7 @@ let quicklisp-to-nix-packages = rec {
            "babel" = quicklisp-to-nix-packages."babel";
            "bordeaux-threads" = quicklisp-to-nix-packages."bordeaux-threads";
            "cffi" = quicklisp-to-nix-packages."cffi";
+           "cffi-grovel" = quicklisp-to-nix-packages."cffi-grovel";
            "chipz" = quicklisp-to-nix-packages."chipz";
            "chunga" = quicklisp-to-nix-packages."chunga";
            "cl+ssl" = quicklisp-to-nix-packages."cl+ssl";
@@ -1736,6 +1761,7 @@ let quicklisp-to-nix-packages = rec {
            "split-sequence" = quicklisp-to-nix-packages."split-sequence";
            "trivial-garbage" = quicklisp-to-nix-packages."trivial-garbage";
            "trivial-types" = quicklisp-to-nix-packages."trivial-types";
+           "usocket" = quicklisp-to-nix-packages."usocket";
        }));
 
 
@@ -1814,6 +1840,7 @@ let quicklisp-to-nix-packages = rec {
        (qlOverrides."clx" or (x: {}))
        (import ./quicklisp-to-nix-output/clx.nix {
          inherit fetchurl;
+           "fiasco" = quicklisp-to-nix-packages."fiasco";
        }));
 
 
@@ -1937,7 +1964,9 @@ let quicklisp-to-nix-packages = rec {
        (import ./quicklisp-to-nix-output/clss.nix {
          inherit fetchurl;
            "array-utils" = quicklisp-to-nix-packages."array-utils";
+           "documentation-utils" = quicklisp-to-nix-packages."documentation-utils";
            "plump" = quicklisp-to-nix-packages."plump";
+           "trivial-indent" = quicklisp-to-nix-packages."trivial-indent";
        }));
 
 
@@ -2056,6 +2085,20 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
+  "closure-html" = buildLispPackage
+    ((f: x: (x // (f x)))
+       (qlOverrides."closure-html" or (x: {}))
+       (import ./quicklisp-to-nix-output/closure-html.nix {
+         inherit fetchurl;
+           "alexandria" = quicklisp-to-nix-packages."alexandria";
+           "babel" = quicklisp-to-nix-packages."babel";
+           "closure-common" = quicklisp-to-nix-packages."closure-common";
+           "flexi-streams" = quicklisp-to-nix-packages."flexi-streams";
+           "trivial-features" = quicklisp-to-nix-packages."trivial-features";
+           "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams";
+       }));
+
+
   "closer-mop" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."closer-mop" or (x: {}))
@@ -2128,6 +2171,14 @@ let quicklisp-to-nix-packages = rec {
        }));
 
 
+  "cl-html-parse" = buildLispPackage
+    ((f: x: (x // (f x)))
+       (qlOverrides."cl-html-parse" or (x: {}))
+       (import ./quicklisp-to-nix-output/cl-html-parse.nix {
+         inherit fetchurl;
+       }));
+
+
   "cl-fuse-meta-fs" = buildLispPackage
     ((f: x: (x // (f x)))
        (qlOverrides."cl-fuse-meta-fs" or (x: {}))
@@ -2378,8 +2429,12 @@ let quicklisp-to-nix-packages = rec {
        (import ./quicklisp-to-nix-output/circular-streams.nix {
          inherit fetchurl;
            "alexandria" = quicklisp-to-nix-packages."alexandria";
+           "babel" = quicklisp-to-nix-packages."babel";
+           "cffi" = quicklisp-to-nix-packages."cffi";
+           "cffi-grovel" = quicklisp-to-nix-packages."cffi-grovel";
            "fast-io" = quicklisp-to-nix-packages."fast-io";
            "static-vectors" = quicklisp-to-nix-packages."static-vectors";
+           "trivial-features" = quicklisp-to-nix-packages."trivial-features";
            "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams";
        }));
 
@@ -2424,16 +2479,41 @@ let quicklisp-to-nix-packages = rec {
        (qlOverrides."caveman" or (x: {}))
        (import ./quicklisp-to-nix-output/caveman.nix {
          inherit fetchurl;
+           "alexandria" = quicklisp-to-nix-packages."alexandria";
            "anaphora" = quicklisp-to-nix-packages."anaphora";
+           "babel" = quicklisp-to-nix-packages."babel";
+           "babel-streams" = quicklisp-to-nix-packages."babel-streams";
+           "bordeaux-threads" = quicklisp-to-nix-packages."bordeaux-threads";
+           "circular-streams" = quicklisp-to-nix-packages."circular-streams";
+           "cl-annot" = quicklisp-to-nix-packages."cl-annot";
+           "cl-ansi-text" = quicklisp-to-nix-packages."cl-ansi-text";
+           "cl-colors" = quicklisp-to-nix-packages."cl-colors";
            "cl-emb" = quicklisp-to-nix-packages."cl-emb";
+           "cl-fad" = quicklisp-to-nix-packages."cl-fad";
            "cl-ppcre" = quicklisp-to-nix-packages."cl-ppcre";
            "cl-project" = quicklisp-to-nix-packages."cl-project";
            "cl-syntax" = quicklisp-to-nix-packages."cl-syntax";
            "cl-syntax-annot" = quicklisp-to-nix-packages."cl-syntax-annot";
+           "cl-utilities" = quicklisp-to-nix-packages."cl-utilities";
            "clack-v1-compat" = quicklisp-to-nix-packages."clack-v1-compat";
+           "dexador" = quicklisp-to-nix-packages."dexador";
            "do-urlencode" = quicklisp-to-nix-packages."do-urlencode";
+           "http-body" = quicklisp-to-nix-packages."http-body";
+           "lack" = quicklisp-to-nix-packages."lack";
+           "let-plus" = quicklisp-to-nix-packages."let-plus";
            "local-time" = quicklisp-to-nix-packages."local-time";
+           "map-set" = quicklisp-to-nix-packages."map-set";
+           "marshal" = quicklisp-to-nix-packages."marshal";
            "myway" = quicklisp-to-nix-packages."myway";
+           "named-readtables" = quicklisp-to-nix-packages."named-readtables";
+           "prove" = quicklisp-to-nix-packages."prove";
+           "quri" = quicklisp-to-nix-packages."quri";
+           "split-sequence" = quicklisp-to-nix-packages."split-sequence";
+           "trivial-backtrace" = quicklisp-to-nix-packages."trivial-backtrace";
+           "trivial-features" = quicklisp-to-nix-packages."trivial-features";
+           "trivial-gray-streams" = quicklisp-to-nix-packages."trivial-gray-streams";
+           "trivial-types" = quicklisp-to-nix-packages."trivial-types";
+           "usocket" = quicklisp-to-nix-packages."usocket";
        }));
 
 
diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix/ql-to-nix.lisp b/pkgs/development/lisp-modules/quicklisp-to-nix/ql-to-nix.lisp
index 2623990856e3..63d6f3305194 100644
--- a/pkgs/development/lisp-modules/quicklisp-to-nix/ql-to-nix.lisp
+++ b/pkgs/development/lisp-modules/quicklisp-to-nix/ql-to-nix.lisp
@@ -98,7 +98,10 @@ will use it instead of re-computing the system data.")
   "Return the path to the file that (if it exists) contains
 pre-computed system data."
   (when *system-data-memoization-path*
-    (merge-pathnames (make-pathname :name system :type "txt") *system-data-memoization-path*)))
+    (merge-pathnames
+      (make-pathname
+        :name (escape-filename (string system))
+        :type "txt") *system-data-memoization-path*)))
 
 (defun memoized-system-data (system)
   "Attempts to locate memoized system data in the path specified by
diff --git a/pkgs/development/lisp-modules/shell.nix b/pkgs/development/lisp-modules/shell.nix
index d3cb7b36aeeb..9eba1e15b799 100644
--- a/pkgs/development/lisp-modules/shell.nix
+++ b/pkgs/development/lisp-modules/shell.nix
@@ -10,6 +10,6 @@ self = rec {
     lispPackages.quicklisp-to-nix lispPackages.quicklisp-to-nix-system-info
   ];
   CPATH = "${libfixposix}/include";
-  LD_LIBRARY_PATH = "${openssl.out}/lib:${fuse}/lib:${libuv}/lib:${libev}/lib:${mysql.connector-c}/lib:${postgresql.lib}/lib:${sqlite.out}/lib:${libfixposix}/lib:${freetds}/lib";
+  LD_LIBRARY_PATH = "${openssl.out}/lib:${fuse}/lib:${libuv}/lib:${libev}/lib:${mysql.connector-c}/lib:${mysql.connector-c}/lib/mysql:${postgresql.lib}/lib:${sqlite.out}/lib:${libfixposix}/lib:${freetds}/lib";
 };
 in stdenv.mkDerivation self
diff --git a/pkgs/development/mobile/adbfs-rootless/default.nix b/pkgs/development/mobile/adbfs-rootless/default.nix
index 091d1adfefbc..18ad3048d832 100644
--- a/pkgs/development/mobile/adbfs-rootless/default.nix
+++ b/pkgs/development/mobile/adbfs-rootless/default.nix
@@ -36,7 +36,7 @@ stdenv.mkDerivation rec {
     description = "Mount Android phones on Linux with adb, no root required";
     inherit (src.meta) homepage;
     license = licenses.bsd3;
-    maintainers = with maintainers; [ profpatsch ];
+    maintainers = with maintainers; [ Profpatsch ];
     platforms = platforms.linux;
   };
 }
diff --git a/pkgs/development/mobile/webos/cmake-modules.nix b/pkgs/development/mobile/webos/cmake-modules.nix
new file mode 100644
index 000000000000..f149cb622e13
--- /dev/null
+++ b/pkgs/development/mobile/webos/cmake-modules.nix
@@ -0,0 +1,32 @@
+{ stdenv, fetchFromGitHub, cmake }:
+
+stdenv.mkDerivation rec {
+  name = "cmake-modules-webos-${version}";
+  version = "19";
+
+  src = fetchFromGitHub {
+    owner = "openwebos";
+    repo = "cmake-modules-webos";
+    rev = "submissions/${version}";
+    sha256 = "1l4hpcmgc98kp9g1642sy111ki5qyk3q7j10xzkgmnvz8lqffnxp";
+  };
+
+  nativeBuildInputs = [ cmake ];
+
+  prePatch = ''
+    substituteInPlace CMakeLists.txt --replace "CMAKE_ROOT}/Modules" "CMAKE_INSTALL_PREFIX}/lib/cmake"
+    substituteInPlace webOS/webOS.cmake \
+      --replace ' ''${CMAKE_ROOT}/Modules' " $out/lib/cmake" \
+      --replace 'INSTALL_ROOT}/usr' 'INSTALL_ROOT}'
+
+    sed -i '/CMAKE_INSTALL_PREFIX/d' webOS/webOS.cmake
+  '';
+
+  setupHook = ./cmake-setup-hook.sh;
+
+  meta = with stdenv.lib; {
+    description = "CMake modules needed to build Open WebOS components";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ dtzWill ];
+  };
+}
diff --git a/pkgs/development/mobile/webos/cmake-setup-hook.sh b/pkgs/development/mobile/webos/cmake-setup-hook.sh
new file mode 100644
index 000000000000..7e52681e9a91
--- /dev/null
+++ b/pkgs/development/mobile/webos/cmake-setup-hook.sh
@@ -0,0 +1,9 @@
+_addWebOSCMakeFlags() {
+  # Help find the webOS cmake module
+  cmakeFlagsArray+=(-DCMAKE_MODULE_PATH=@out@/lib/cmake)
+
+  # fix installation path (doesn't use CMAKE_INSTALL_PREFIX)
+  cmakeFlagsArray+=(-DWEBOS_INSTALL_ROOT=${!outputBin})
+}
+
+preConfigureHooks+=(_addWebOSCMakeFlags)
diff --git a/pkgs/development/mobile/webos/novacom.nix b/pkgs/development/mobile/webos/novacom.nix
new file mode 100644
index 000000000000..52b50635e336
--- /dev/null
+++ b/pkgs/development/mobile/webos/novacom.nix
@@ -0,0 +1,27 @@
+{ stdenv, fetchFromGitHub, webos, cmake, pkgconfig }:
+
+stdenv.mkDerivation rec {
+  name = "novacom-${version}";
+  version = "18";
+
+  src = fetchFromGitHub {
+    owner = "openwebos";
+    repo = "novacom";
+    rev = "submissions/${version}";
+    sha256 = "12s6g7l20kakyjlhqpli496miv2kfsdp17lcwhdrzdxvxl6hnf4n";
+  };
+
+  nativeBuildInputs = [ cmake pkgconfig webos.cmake-modules ];
+
+  postInstall = ''
+    install -Dm755 -t $out/bin ../scripts/novaterm
+    substituteInPlace $out/bin/novaterm --replace "exec novacom" "exec $out/bin/novacom"
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Utility for communicating with WebOS devices";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ dtzWill ];
+    platforms = platforms.linux;
+  };
+}
diff --git a/pkgs/development/mobile/webos/novacomd.nix b/pkgs/development/mobile/webos/novacomd.nix
new file mode 100644
index 000000000000..f82009b0c39c
--- /dev/null
+++ b/pkgs/development/mobile/webos/novacomd.nix
@@ -0,0 +1,40 @@
+{ stdenv,
+fetchFromGitHub, fetchpatch,
+webos, cmake, pkgconfig,
+libusb }:
+
+stdenv.mkDerivation rec {
+  name = "novacomd-${version}";
+  version = "127";
+
+  src = fetchFromGitHub {
+    owner = "openwebos";
+    repo = "novacomd";
+    rev = "submissions/${version}";
+    sha256 = "1gahc8bvvvs4d6svrsw24iw5r0mhy4a2ars3j2gz6mp6sh42bznl";
+  };
+
+  patches = [
+    (fetchpatch {
+      url = "https://aur.archlinux.org/cgit/aur.git/plain/0001-Use-usb_bulk_-read-write-instead-of-homemade-handler.patch?h=palm-novacom-git";
+      sha256 = "116r6p4l767fqxfvq03sy6v7vxja8pkxlrc5hqby351a40b5dkiv";
+    })
+    (fetchpatch {
+      url = "https://raw.githubusercontent.com/feniksa/webos-overlay/40e2c113fc9426d50bdf37779da57ce4ff06ee6e/net-misc/novacomd/files/0011-Remove-verbose-output.patch";
+      sha256 = "09lmv06ziwkfg19b1h3jsmkm6g1f0nxxq1717dircjx8m45ypjq9";
+    })
+  ];
+
+  nativeBuildInputs = [ cmake pkgconfig webos.cmake-modules ];
+
+  buildInputs = [ libusb ];
+
+  cmakeFlags = [ "-DWEBOS_TARGET_MACHINE_IMPL=host" ];
+
+  meta = with stdenv.lib; {
+    description = "Daemon for communicating with WebOS devices";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ dtzWill ];
+    platforms = platforms.linux;
+  };
+}
diff --git a/pkgs/development/node-packages/node-packages-v6.json b/pkgs/development/node-packages/node-packages-v6.json
index 49380392bab5..ad9d79fd88ec 100644
--- a/pkgs/development/node-packages/node-packages-v6.json
+++ b/pkgs/development/node-packages/node-packages-v6.json
@@ -44,6 +44,7 @@
 , "js-beautify"
 , "jsonlint"
 , "jsontool"
+, "json-diff"
 , "json-refs"
 , "json-server"
 , "js-yaml"
diff --git a/pkgs/development/node-packages/node-packages-v6.nix b/pkgs/development/node-packages/node-packages-v6.nix
index 316693ecec0b..90f5fd309d00 100644
--- a/pkgs/development/node-packages/node-packages-v6.nix
+++ b/pkgs/development/node-packages/node-packages-v6.nix
@@ -4135,6 +4135,15 @@ let
         sha1 = "4fa917c3e59c94a004cd61f8ee509da651687143";
       };
     };
+    "cli-color-0.1.7" = {
+      name = "cli-color";
+      packageName = "cli-color";
+      version = "0.1.7";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/cli-color/-/cli-color-0.1.7.tgz";
+        sha1 = "adc3200fa471cc211b0da7f566b71e98b9d67347";
+      };
+    };
     "cli-cursor-1.0.2" = {
       name = "cli-cursor";
       packageName = "cli-cursor";
@@ -6998,6 +7007,15 @@ let
         sha1 = "b5835739270cfe26acf632099fded2a07f209e5e";
       };
     };
+    "difflib-0.2.4" = {
+      name = "difflib";
+      packageName = "difflib";
+      version = "0.2.4";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/difflib/-/difflib-0.2.4.tgz";
+        sha1 = "b5e30361a6db023176d562892db85940a718f47e";
+      };
+    };
     "director-1.2.7" = {
       name = "director";
       packageName = "director";
@@ -7331,6 +7349,15 @@ let
         sha1 = "531319715b0e81ffcc22eb28478ba27643e12c6c";
       };
     };
+    "dreamopt-0.6.0" = {
+      name = "dreamopt";
+      packageName = "dreamopt";
+      version = "0.6.0";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/dreamopt/-/dreamopt-0.6.0.tgz";
+        sha1 = "d813ccdac8d39d8ad526775514a13dda664d6b4b";
+      };
+    };
     "dtrace-provider-0.6.0" = {
       name = "dtrace-provider";
       packageName = "dtrace-provider";
@@ -7890,6 +7917,15 @@ let
         sha512 = "0m7d1yd67hb93gsxv7790h9ayxg3pwf3vgih9v2kxqvsg073wim7jgwf3z57lksdczxnqv2d8gm4mfk4b29f6rc27a7c09vz9w348wc";
       };
     };
+    "es5-ext-0.8.2" = {
+      name = "es5-ext";
+      packageName = "es5-ext";
+      version = "0.8.2";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/es5-ext/-/es5-ext-0.8.2.tgz";
+        sha1 = "aba8d9e1943a895ac96837a62a39b3f55ecd94ab";
+      };
+    };
     "es5class-2.3.1" = {
       name = "es5class";
       packageName = "es5class";
@@ -11005,6 +11041,15 @@ let
         sha1 = "6e62fae668947f88184d5c156ede7c5695a7e9c8";
       };
     };
+    "heap-0.2.6" = {
+      name = "heap";
+      packageName = "heap";
+      version = "0.2.6";
+      src = fetchurl {
+        url = "https://registry.npmjs.org/heap/-/heap-0.2.6.tgz";
+        sha1 = "087e1f10b046932fc8594dd9e6d378afc9d1e5ac";
+      };
+    };
     "help-me-1.1.0" = {
       name = "help-me";
       packageName = "help-me";
@@ -32651,6 +32696,30 @@ in
     production = true;
     bypassCache = false;
   };
+  json-diff = nodeEnv.buildNodePackage {
+    name = "json-diff";
+    packageName = "json-diff";
+    version = "0.5.2";
+    src = fetchurl {
+      url = "https://registry.npmjs.org/json-diff/-/json-diff-0.5.2.tgz";
+      sha512 = "03nqzpjpb0422fm5k7prlfcyb7wbs7dq7arwzq0za8zq3jy4wvbjjsbm25vr8ar5y6y87k9y1iqyc018zfysh2b675ql3qx6jjimfip";
+    };
+    dependencies = [
+      sources."cli-color-0.1.7"
+      sources."difflib-0.2.4"
+      sources."dreamopt-0.6.0"
+      sources."es5-ext-0.8.2"
+      sources."heap-0.2.6"
+      sources."wordwrap-1.0.0"
+    ];
+    buildInputs = globalBuildInputs;
+    meta = {
+      description = "JSON diff";
+      homepage = https://github.com/andreyvit/json-diff;
+    };
+    production = true;
+    bypassCache = false;
+  };
   json-refs = nodeEnv.buildNodePackage {
     name = "json-refs";
     packageName = "json-refs";
diff --git a/pkgs/development/ocaml-modules/bitv/default.nix b/pkgs/development/ocaml-modules/bitv/default.nix
new file mode 100644
index 000000000000..359d83b4762a
--- /dev/null
+++ b/pkgs/development/ocaml-modules/bitv/default.nix
@@ -0,0 +1,27 @@
+{ stdenv, fetchzip, autoreconfHook, which, ocaml, findlib }:
+
+if !stdenv.lib.versionAtLeast ocaml.version "4.02"
+then throw "bitv is not available for OCaml ${ocaml.version}"
+else
+
+stdenv.mkDerivation rec {
+  name = "ocaml${ocaml.version}-bitv-${version}";
+  version = "1.3";
+
+  src = fetchzip {
+    url = "https://github.com/backtracking/bitv/archive/${version}.tar.gz";
+    sha256 = "0vkh1w9fpi5m1sgiqg6r38j3fqglhdajmbyiyr91113lrpljm75i";
+  };
+
+  buildInputs = [ autoreconfHook which ocaml findlib ];
+
+  createFindlibDestdir = true;
+
+  meta = {
+    description = "A bit vector library for OCaml";
+    license = stdenv.lib.licenses.lgpl21;
+    homepage = "https://github.com/backtracking/bitv";
+    maintainers = [ stdenv.lib.maintainers.vbgl ];
+    inherit (ocaml.meta) platforms;
+  };
+}
diff --git a/pkgs/development/ocaml-modules/cil/default.nix b/pkgs/development/ocaml-modules/cil/default.nix
index 99b5f92b3405..0394266353ce 100644
--- a/pkgs/development/ocaml-modules/cil/default.nix
+++ b/pkgs/development/ocaml-modules/cil/default.nix
@@ -11,6 +11,7 @@ stdenv.mkDerivation {
   createFindlibDestdir = true;
 
   preConfigure = ''
+    substituteInPlace Makefile.in --replace 'MACHDEPCC=gcc' 'MACHDEPCC=$(CC)'
     export FORCE_PERL_PREFIX=1
   '';
   prefixKey = "-prefix=";
diff --git a/pkgs/development/ocaml-modules/lwt_ssl/default.nix b/pkgs/development/ocaml-modules/lwt_ssl/default.nix
new file mode 100644
index 000000000000..e53c835a2911
--- /dev/null
+++ b/pkgs/development/ocaml-modules/lwt_ssl/default.nix
@@ -0,0 +1,24 @@
+{ stdenv, fetchzip, ocaml, findlib, jbuilder, ssl, lwt }:
+
+stdenv.mkDerivation rec {
+  version = "1.1.2";
+  name = "ocaml${ocaml.version}-lwt_ssl-${version}";
+
+  src = fetchzip {
+    url = "https://github.com/aantron/lwt_ssl/archive/${version}.tar.gz";
+    sha256 = "1q0an3djqjxv83v3iswi7m81braqx93kcrcwrxwmf6jzhdm4pn15";
+  };
+
+  buildInputs = [ ocaml findlib jbuilder ];
+  propagatedBuildInputs = [ ssl lwt ];
+
+  inherit (jbuilder) installPhase;
+
+  meta = {
+    homepage = "https://github.com/aantron/lwt_ssl";
+    description = "OpenSSL binding with concurrent I/O";
+    license = stdenv.lib.licenses.lgpl21;
+    maintainers = [ stdenv.lib.maintainers.vbgl ];
+    inherit (ocaml.meta) platforms;
+  };
+}
diff --git a/pkgs/development/ocaml-modules/tyxml/default.nix b/pkgs/development/ocaml-modules/tyxml/default.nix
index 49cc56a1db6a..a965d6ed1163 100644
--- a/pkgs/development/ocaml-modules/tyxml/default.nix
+++ b/pkgs/development/ocaml-modules/tyxml/default.nix
@@ -1,26 +1,21 @@
-{ stdenv, fetchzip, fetchpatch, ocaml, findlib, ocamlbuild, ocaml_oasis, camlp4, uutf, markup, ppx_tools, re
+{ stdenv, fetchzip, ocaml, findlib, ocamlbuild, camlp4, uutf, markup, ppx_tools_versioned, re
 }:
 
 assert stdenv.lib.versionAtLeast ocaml.version "4.02";
 
 stdenv.mkDerivation rec {
   pname = "tyxml";
-  version = "4.0.1";
+  version = "4.2.0";
   name = "ocaml${ocaml.version}-${pname}-${version}";
 
   src = fetchzip {
     url = "http://github.com/ocsigen/tyxml/archive/${version}.tar.gz";
-    sha256 = "1mwkjvl78gvw7pvql5qp64cfjjca6aqsb04999qkllifyicaaq8y";
+    sha256 = "1zrkrmxyj5a2cdh4b9zr9anwfk320wv3x0ynxnyxl5za2ix8sld8";
   };
 
-  patches = [ (fetchpatch {
-    url = https://github.com/dbuenzli/tyxml/commit/a2bf5ccc0b6e684e7b81274ff19df8d72e2def8d.diff;
-    sha256 = "11sidgiwz3zqw815vlslbfzb456z0lndkh425mlmvnmck4d2v2i3";
-  })];
+  buildInputs = [ ocaml findlib ocamlbuild camlp4 ppx_tools_versioned markup ];
 
-  buildInputs = [ ocaml findlib ocamlbuild camlp4 ];
-
-  propagatedBuildInputs = [uutf re ppx_tools markup];
+  propagatedBuildInputs = [ uutf re ];
 
   createFindlibDestdir = true;
 
diff --git a/pkgs/development/perl-modules/DBD-SQLite/default.nix b/pkgs/development/perl-modules/DBD-SQLite/default.nix
index a2a439b295b0..2737ad95d4b7 100644
--- a/pkgs/development/perl-modules/DBD-SQLite/default.nix
+++ b/pkgs/development/perl-modules/DBD-SQLite/default.nix
@@ -2,11 +2,11 @@
 
 buildPerlPackage rec {
   name = "DBD-SQLite-${version}";
-  version = "1.54";
+  version = "1.55_07";
 
   src = fetchurl {
-    url = "mirror://cpan/authors/id/I/IS/ISHIGAKI/${name}.tar.gz";
-    sha256 = "3929a6dbd8d71630f0cb57f85dcef9588cd7ac4c9fa12db79df77b9d3a4d7269";
+    url = "https://github.com/DBD-SQLite/DBD-SQLite/archive/${version}.tar.gz";
+    sha256 = "0213a31eb7b5afc2d7b3775ca2d1717d07fc7e9ed21ae73b2513a8d54ca222d8";
   };
 
   propagatedBuildInputs = [ DBI ];
@@ -17,8 +17,7 @@ buildPerlPackage rec {
     ./external-sqlite.patch
   ];
 
-  SQLITE_INC = sqlite.dev + "/include";
-  SQLITE_LIB = sqlite.out + "/lib";
+  makeMakerFlags = "SQLITE_INC=${sqlite.dev}/include SQLITE_LIB=${sqlite.out}/lib";
 
   preBuild =
     ''
diff --git a/pkgs/development/python-modules/JPype1/default.nix b/pkgs/development/python-modules/JPype1/default.nix
new file mode 100644
index 000000000000..b52871793bee
--- /dev/null
+++ b/pkgs/development/python-modules/JPype1/default.nix
@@ -0,0 +1,22 @@
+{ lib, buildPythonPackage, fetchPypi, isPy3k }:
+
+buildPythonPackage rec {
+  pname = "JPype1";
+  version = "0.6.2";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "09bzmnzkjbrf60h39wapxc1l8mb3r9km486cly0mm78bv096884r";
+  };
+
+  patches = [ ./set-compiler-language.patch ];
+
+  # Test loader complains about non-test module on python3.
+  doCheck = !isPy3k;
+
+  meta = {
+    homepage = "https://github.com/originell/jpype/";
+    license = "License :: OSI Approved :: Apache Software License";
+    description = "A Python to Java bridge.";
+  };
+}
diff --git a/pkgs/development/python-modules/JPype1/set-compiler-language.patch b/pkgs/development/python-modules/JPype1/set-compiler-language.patch
new file mode 100644
index 000000000000..1d5921a6ffab
--- /dev/null
+++ b/pkgs/development/python-modules/JPype1/set-compiler-language.patch
@@ -0,0 +1,12 @@
+diff -Naur a/setup.py b/setup.py
+--- a/setup.py	2017-01-12 19:08:44.000000000 -0500
++++ b/setup.py	2018-02-15 12:28:16.000000000 -0500
+@@ -123,7 +123,7 @@
+ 
+     # extra compile args
+     copt = {'msvc': ['/EHsc'],
+-            'unix' : ['-ggdb'],
++            'unix' : ['-ggdb', '-x', 'c++'],
+             'mingw32' : [],
+            }
+     # extra link args
diff --git a/pkgs/development/python-modules/JayDeBeApi/default.nix b/pkgs/development/python-modules/JayDeBeApi/default.nix
new file mode 100644
index 000000000000..a423945b0ce8
--- /dev/null
+++ b/pkgs/development/python-modules/JayDeBeApi/default.nix
@@ -0,0 +1,16 @@
+{ lib, buildPythonPackage, fetchPypi, JPype1 }:
+
+buildPythonPackage rec {
+  pname = "JayDeBeApi";
+  version = "1.1.1";
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0a189xs9zw81jvwwglvf2qyqnk6ra0biljssx9n4ffayqn9glbds";
+  };
+  propagatedBuildInputs = [ JPype1 ];
+  meta = {
+    homepage = "https://github.com/baztian/jaydebeapi";
+    license = lib.licenses.lgpl2;
+    description = "Use JDBC database drivers from Python 2/3 or Jython with a DB-API.";
+  };
+}
diff --git a/pkgs/development/python-modules/Nikola/default.nix b/pkgs/development/python-modules/Nikola/default.nix
index 8f8d91c64d2f..99cc4c3eab8a 100644
--- a/pkgs/development/python-modules/Nikola/default.nix
+++ b/pkgs/development/python-modules/Nikola/default.nix
@@ -6,7 +6,7 @@
 , glibcLocales
 , pytest
 , pytestcov
-, pytest-mock
+, mock
 , pygments
 , pillow
 , dateutil
@@ -28,7 +28,6 @@
 }:
 
 buildPythonPackage rec {
-  name = "${pname}-${version}";
   pname = "Nikola";
   version = "7.8.11";
 
@@ -37,7 +36,7 @@ buildPythonPackage rec {
   # other hand doesn't support Python 3.3). So, just disable Python 2.
   disabled = !isPy3k;
 
-  buildInputs = [ pytest pytestcov pytest-mock glibcLocales ];
+  checkInputs = [ pytest pytestcov mock glibcLocales ];
 
   propagatedBuildInputs = [
     pygments pillow dateutil docutils Mako unidecode lxml Yapsy PyRSS2Gen
diff --git a/pkgs/development/python-modules/adal/default.nix b/pkgs/development/python-modules/adal/default.nix
index a1fb96673957..bfd23ab584f9 100644
--- a/pkgs/development/python-modules/adal/default.nix
+++ b/pkgs/development/python-modules/adal/default.nix
@@ -3,12 +3,12 @@
 
 buildPythonPackage rec {
   pname = "adal";
-  version = "0.4.7";
+  version = "0.5.0";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "114046ac85d0054791c21b00922f26286822bc6f2ba3716db42e7e57f762ef20";
+    sha256 = "120821f72ca9d59a7c7197fc14d0e27448ff8d331fae230f92d713b9b5c721f7";
   };
 
   propagatedBuildInputs =  [ requests pyjwt dateutil ];
diff --git a/pkgs/development/python-modules/aenum/default.nix b/pkgs/development/python-modules/aenum/default.nix
index 466c20e19ca5..facf86c58988 100644
--- a/pkgs/development/python-modules/aenum/default.nix
+++ b/pkgs/development/python-modules/aenum/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "aenum";
-  version = "2.0.9";
+  version = "2.1.0";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d98bc55136d696fcf323760c3db0de489da9e41fd51283fa6f90205deb85bf6a";
+    sha256 = "9eb1c8f48ae13c56d22a7227db0e4b1717131b284c6c0db6e4ccca6f5894df95";
   };
 
   # For Python 3, locale has to be set to en_US.UTF-8 for
diff --git a/pkgs/development/python-modules/agate-excel/default.nix b/pkgs/development/python-modules/agate-excel/default.nix
index cb0113c22b3d..b39df3959fae 100644
--- a/pkgs/development/python-modules/agate-excel/default.nix
+++ b/pkgs/development/python-modules/agate-excel/default.nix
@@ -3,11 +3,11 @@
 buildPythonPackage rec {
     name = "${pname}-${version}";
     pname = "agate-excel";
-    version = "0.2.1";
+    version = "0.2.2";
 
     src = fetchPypi {
       inherit pname version;
-      sha256 = "1d28s01a0a8n8rdrd78w88cqgl3lawzy38h9afwm0iks618i0qn7";
+      sha256 = "8923f71ee2b5b7b21e52fb314a769b28fb902f647534f5cbbb41991d8710f4c7";
     };
 
     propagatedBuildInputs = [ agate openpyxl xlrd ];
diff --git a/pkgs/development/python-modules/agate-sql/default.nix b/pkgs/development/python-modules/agate-sql/default.nix
index 0167b40ea43f..34de9ea06e9c 100644
--- a/pkgs/development/python-modules/agate-sql/default.nix
+++ b/pkgs/development/python-modules/agate-sql/default.nix
@@ -3,11 +3,11 @@
 buildPythonPackage rec {
     name = "${pname}-${version}";
     pname = "agate-sql";
-    version = "0.5.2";
+    version = "0.5.3";
 
     src = fetchPypi {
       inherit pname version;
-      sha256 = "0qlfwql6fnbs0r1rj7nxv4n5scad53b8dlh4qv6gyklvdk3wwn14";
+      sha256 = "877b7b85adb5f0325455bba8d50a1623fa32af33680b554feca7c756a15ad9b4";
     };
 
     propagatedBuildInputs = [ agate sqlalchemy ];
diff --git a/pkgs/development/python-modules/aioconsole/default.nix b/pkgs/development/python-modules/aioconsole/default.nix
new file mode 100644
index 000000000000..b865b5654964
--- /dev/null
+++ b/pkgs/development/python-modules/aioconsole/default.nix
@@ -0,0 +1,29 @@
+{ lib, buildPythonPackage, fetchPypi }:
+
+# This package provides a binary "apython" which sometimes invokes
+# [sys.executable, '-m', 'aioconsole'] as a subprocess. If apython is
+# run directly out of this derivation, it won't work, because
+# sys.executable will point to a Python binary that is not wrapped to
+# be able to find aioconsole.
+# However, apython will work fine when using python##.withPackages,
+# because with python##.withPackages the sys.executable is already
+# wrapped to be able to find aioconsole and any other packages.
+buildPythonPackage rec {
+  pname = "aioconsole";
+  version = "0.1.7";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "17bnfcp0gacnmpdam6byb7rwhqibw57f736bbgk45w4cy2lglj3y";
+  };
+
+  # hardcodes a test dependency on an old version of pytest-asyncio
+  doCheck = false;
+
+  meta = {
+    description = "Asynchronous console and interfaces for asyncio";
+    homepage = https://github.com/vxgmichel/aioconsole;
+    license = lib.licenses.gpl3;
+    maintainers = [ lib.maintainers.catern ];
+  };
+}
diff --git a/pkgs/development/python-modules/aiohttp/default.nix b/pkgs/development/python-modules/aiohttp/default.nix
index bea839f49e3d..19ad64e7472e 100644
--- a/pkgs/development/python-modules/aiohttp/default.nix
+++ b/pkgs/development/python-modules/aiohttp/default.nix
@@ -2,6 +2,7 @@
 , buildPythonPackage
 , fetchPypi
 , pythonOlder
+, attrs
 , chardet
 , multidict
 , async-timeout
@@ -9,30 +10,29 @@
 , idna-ssl
 , pytest
 , gunicorn
-, pytest-raisesregexp
 , pytest-mock
 }:
 
 buildPythonPackage rec {
   pname = "aiohttp";
-  version = "2.3.10";
+  version = "3.0.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "8adda6583ba438a4c70693374e10b60168663ffa6564c5c75d3c7a9055290964";
+    sha256 = "7aee5c0750584946fde40da70f0b28fe769f85182f1171acef18a35fd8ecd221";
   };
 
   disabled = pythonOlder "3.4";
 
-  checkInputs = [ pytest gunicorn pytest-raisesregexp pytest-mock ];
+  checkInputs = [ pytest gunicorn pytest-mock ];
 
-  propagatedBuildInputs = [ async-timeout chardet multidict yarl ]
+  propagatedBuildInputs = [ attrs chardet multidict async-timeout yarl ]
     ++ lib.optional (pythonOlder "3.7") idna-ssl;
 
   meta = with lib; {
     description = "Asynchronous HTTP Client/Server for Python and asyncio";
     license = licenses.asl20;
-    homepage = https://github.com/KeepSafe/aiohttp/;
+    homepage = https://github.com/aio-libs/aiohttp;
     maintainers = with maintainers; [ dotlambda ];
   };
 }
diff --git a/pkgs/development/python-modules/alembic/default.nix b/pkgs/development/python-modules/alembic/default.nix
index 54e1a753597c..176805e57e5c 100644
--- a/pkgs/development/python-modules/alembic/default.nix
+++ b/pkgs/development/python-modules/alembic/default.nix
@@ -6,11 +6,11 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "alembic";
-  version = "0.9.7";
+  version = "0.9.8";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "46f4849c6dce69f54dd5001b3215b6a983dee6b17512efee10e237fa11f20cfa";
+    sha256 = "13b8611788acf0d7b617775db5c2ae26554a6d4263c590ef628d448fd05aef56";
   };
 
   buildInputs = [ pytest pytestcov mock coverage ];
diff --git a/pkgs/development/python-modules/ansicolor/default.nix b/pkgs/development/python-modules/ansicolor/default.nix
index ca29b631f471..26b182dfc08a 100644
--- a/pkgs/development/python-modules/ansicolor/default.nix
+++ b/pkgs/development/python-modules/ansicolor/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "ansicolor";
-  version = "0.2.4";
+  version = "0.2.6";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0zlkk9706xn5yshwzdn8xsfkim8iv44zsl6qjwg2f4gn62rqky1h";
+    sha256 = "d17e1b07b9dd7ded31699fbca53ae6cd373584f9b6dcbc124d1f321ebad31f1d";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/python-modules/argcomplete/default.nix b/pkgs/development/python-modules/argcomplete/default.nix
index 37164cb42760..b13470b4c45b 100644
--- a/pkgs/development/python-modules/argcomplete/default.nix
+++ b/pkgs/development/python-modules/argcomplete/default.nix
@@ -4,11 +4,11 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "argcomplete";
-  version = "1.9.3";
+  version = "1.9.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d97b7f3cfaa4e494ad59ed6d04c938fc5ed69b590bd8f53274e258fb1119bd1b";
+    sha256 = "06c8a54ffaa6bfc9006314498742ec8843601206a3b94212f82657673662ecf1";
   };
 
   doCheck = false; # bash-completion test fails with "compgen: command not found".
diff --git a/pkgs/development/python-modules/arxiv2bib/default.nix b/pkgs/development/python-modules/arxiv2bib/default.nix
new file mode 100644
index 000000000000..1182c36fc0ca
--- /dev/null
+++ b/pkgs/development/python-modules/arxiv2bib/default.nix
@@ -0,0 +1,28 @@
+{ buildPythonPackage, python, lib, fetchFromGitHub
+, mock
+}:
+
+buildPythonPackage rec {
+  pname = "arxiv2bib";
+  version = "1.0.8";
+
+  # Missing tests on Pypi
+  src = fetchFromGitHub {
+    owner = "nathangrigg";
+    repo = "arxiv2bib";
+    rev = version;
+    sha256 = "1kp2iyx20lpc9dv4qg5fgwf83a1wx6f7hj1ldqyncg0kn9xcrhbg";
+  };
+
+  # Required for tests only
+  checkInputs = [ mock ];
+
+  checkPhase = "${python.interpreter} -m unittest discover -s tests";
+
+  meta = with lib; {
+    description = "Get a BibTeX entry from an arXiv id number, using the arxiv.org API";
+    homepage = http://nathangrigg.github.io/arxiv2bib/;
+    license = licenses.bsd3;
+    maintainers = [ maintainers.nico202 ];
+  };
+}
diff --git a/pkgs/development/python-modules/asana/default.nix b/pkgs/development/python-modules/asana/default.nix
index 7990ece749b5..91664f76ad10 100644
--- a/pkgs/development/python-modules/asana/default.nix
+++ b/pkgs/development/python-modules/asana/default.nix
@@ -4,7 +4,7 @@
 
 buildPythonPackage rec {
   pname = "asana";
-  version = "0.6.7";
+  version = "0.7.0";
   name = "${pname}-${version}";
 
   meta = {
@@ -15,7 +15,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d576601116764050c4cf63b417f1c24700b76cf6686f0e51e6b0b77d450e7973";
+    sha256 = "a7ff4a78529257a5412e78cafd6b3025523364c0ab628d579f2771dd66b254bc";
   };
 
   checkInputs = [ pytest ];
diff --git a/pkgs/development/python-modules/asgiref/default.nix b/pkgs/development/python-modules/asgiref/default.nix
index d88f44149bf2..223f53698e95 100644
--- a/pkgs/development/python-modules/asgiref/default.nix
+++ b/pkgs/development/python-modules/asgiref/default.nix
@@ -1,12 +1,12 @@
 { stdenv, buildPythonPackage, fetchurl, six }:
 buildPythonPackage rec {
-  version = "2.1.0";
+  version = "2.1.5";
   pname = "asgiref";
   name = "${pname}-${version}";
 
   src = fetchurl {
     url = "mirror://pypi/a/asgiref/${name}.tar.gz";
-    sha256 = "2bfd70fcc51df4036768b91d7b13524090dc8f366d79fa44ba2b0aeb47306344";
+    sha256 = "1a46196df28c67e046a54cc537ce5a8f6a59eb68649f54680d7e4fc3b113ab1b";
   };
 
   propagatedBuildInputs = [ six ];
diff --git a/pkgs/development/python-modules/asn1ate/default.nix b/pkgs/development/python-modules/asn1ate/default.nix
index 7605e2c30858..29dae1fd663a 100644
--- a/pkgs/development/python-modules/asn1ate/default.nix
+++ b/pkgs/development/python-modules/asn1ate/default.nix
@@ -1,15 +1,12 @@
-{ stdenv, buildPythonPackage, fetchFromGitHub
-, pyparsing }:
+{ stdenv, buildPythonPackage, fetchFromGitHub, pyparsing }:
 
 buildPythonPackage rec {
   pname = "asn1ate";
-  date = "20160810";
-  version = "unstable-${date}";
-  name = "${pname}-${version}";
+  version= "0.6";
 
   src = fetchFromGitHub {
-    sha256 = "04pddr1mh2v9qq8fg60czwvjny5qwh4nyxszr3qc4bipiiv2xk9w";
-    rev = "c56104e8912400135509b584d84423ee05a5af6b";
+    sha256 = "1p8hv4gsyqsdr0gafcq497n52pybiqmc22di8ai4nsj60fv0km45";
+    rev = "v${version}";
     owner = "kimgr";
     repo = pname;
   };
diff --git a/pkgs/development/python-modules/astral/default.nix b/pkgs/development/python-modules/astral/default.nix
index 76dba87f9648..c6a3ac47aa70 100644
--- a/pkgs/development/python-modules/astral/default.nix
+++ b/pkgs/development/python-modules/astral/default.nix
@@ -2,12 +2,11 @@
 
 buildPythonPackage rec {
   pname = "astral";
-  version = "1.4";
+  version = "1.5";
 
   src = fetchPypi {
     inherit pname version;
-    extension = "zip";
-    sha256 = "1zm1ypc6w279gh7lbgsfbzfxk2x4gihlq3rfh59hj70hmhjwiwp7";
+    sha256 = "527628fbfe90c1596c3950ff84ebd07ecc10c8fb1044c903a0519b5057700cb6";
   };
 
   propagatedBuildInputs = [ pytz ];
diff --git a/pkgs/development/python-modules/astroid/default.nix b/pkgs/development/python-modules/astroid/default.nix
index 862157f686a3..d22a10ec1502 100644
--- a/pkgs/development/python-modules/astroid/default.nix
+++ b/pkgs/development/python-modules/astroid/default.nix
@@ -6,11 +6,11 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "astroid";
-  version = "1.6.0";
+  version = "1.6.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "71dadba2110008e2c03f9fde662ddd2053db3c0489d0e03c94e828a0399edd4f";
+    sha256 = "f0a0e386dbca9f93ea9f3ea6f32b37a24720502b7baa9cb17c3976a680d43a06";
   };
 
   propagatedBuildInputs = [ logilab_common six lazy-object-proxy wrapt ]
diff --git a/pkgs/development/python-modules/astropy/default.nix b/pkgs/development/python-modules/astropy/default.nix
index 514762b7a37d..ccf988fc56db 100644
--- a/pkgs/development/python-modules/astropy/default.nix
+++ b/pkgs/development/python-modules/astropy/default.nix
@@ -7,13 +7,13 @@
 buildPythonPackage rec {
   
   pname = "astropy";
-  version = "2.0.3";
+  version = "3.0";
 
   name = "${pname}-${version}";
   doCheck = false; #Some tests are failing. More importantly setup.py hangs on completion. Needs fixing with a proper shellhook.
   src = fetchPypi {
     inherit pname version;
-    sha256 = "fdfc0248f6250798ed6d1327be609cb901db89ae01fc768cfbc9e263bdf56f4f";
+    sha256 = "9e0ad19b9d6d227bdf0932bbe64a8c5dd4a47d4ec078586cf24bf9f0c61d9ecf";
   };
 
   propagatedBuildInputs = [ pytest numpy ]; # yes it really has pytest in install_requires
diff --git a/pkgs/development/python-modules/async_timeout/default.nix b/pkgs/development/python-modules/async_timeout/default.nix
index 650517d44d92..53010a2a031d 100644
--- a/pkgs/development/python-modules/async_timeout/default.nix
+++ b/pkgs/development/python-modules/async_timeout/default.nix
@@ -1,22 +1,19 @@
 { lib
-, fetchurl
+, fetchPypi
 , buildPythonPackage
 , pytestrunner
 , pythonOlder
 }:
 
-let
+buildPythonPackage rec {
   pname = "async-timeout";
   version = "2.0.0";
-in buildPythonPackage rec {
-  name = "${pname}-${version}";
 
-  src = fetchurl {
-    url = "mirror://pypi/${builtins.substring 0 1 pname}/${pname}/${name}.tar.gz";
+  src = fetchPypi {
+    inherit pname version;
     sha256 = "c17d8ac2d735d59aa62737d76f2787a6c938f5a944ecf768a8c0ab70b0dea566";
   };
 
-  buildInputs = [ pytestrunner ];
   # Circular dependency on aiohttp
   doCheck = false;
 
@@ -27,4 +24,4 @@ in buildPythonPackage rec {
     homepage = https://github.com/aio-libs/async_timeout/;
     license = lib.licenses.asl20;
   };
-}
\ No newline at end of file
+}
diff --git a/pkgs/development/python-modules/autopep8/default.nix b/pkgs/development/python-modules/autopep8/default.nix
index 06ad939cfa8b..6e58e3485ab2 100644
--- a/pkgs/development/python-modules/autopep8/default.nix
+++ b/pkgs/development/python-modules/autopep8/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "autopep8";
-  version = "1.3.3";
+  version = "1.3.4";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0c1gl648g2xnz3j0rsp71ld4i32zlglmqjvqf4q8r08jp3zpny7z";
+    sha256 = "c7be71ab0cb2f50c9c22c82f0c9acaafc6f57492c3fbfee9790c415005c2b9a5";
   };
 
   propagatedBuildInputs = [ pycodestyle ];
diff --git a/pkgs/development/python-modules/awesome-slugify/default.nix b/pkgs/development/python-modules/awesome-slugify/default.nix
index 105c70c28b34..945c941dec4e 100644
--- a/pkgs/development/python-modules/awesome-slugify/default.nix
+++ b/pkgs/development/python-modules/awesome-slugify/default.nix
@@ -3,13 +3,17 @@
 buildPythonPackage rec {
   pname = "awesome-slugify";
   version = "1.6.5";
-  name  = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
     sha256 = "0wgxrhr8s5vk2xmcz9s1z1aml4ppawmhkbggl9rp94c747xc7pmv";
   };
 
+  prePatch = ''
+    substituteInPlace setup.py \
+        --replace 'Unidecode>=0.04.14,<0.05' 'Unidecode>=0.04.14'
+  '';
+
   patches = [
     ./slugify_filename_test.patch # fixes broken test by new unidecode
   ];
diff --git a/pkgs/development/python-modules/backports_csv/default.nix b/pkgs/development/python-modules/backports_csv/default.nix
index 5f2e90e50b8d..479792a7ca59 100644
--- a/pkgs/development/python-modules/backports_csv/default.nix
+++ b/pkgs/development/python-modules/backports_csv/default.nix
@@ -11,7 +11,7 @@ buildPythonPackage rec {
     sha256 = "1imzbrradkfn8s2m1qcimyn74dn1mz2p3j381jljn166rf2i6hlc";
   };
 
-  propogatedBuildInputs = [ future ];
+  propagatedBuildInputs = [ future ];
 
   meta = with stdenv.lib; {
     description = "Backport of Python 3 csv module";
diff --git a/pkgs/development/python-modules/backports_functools_lru_cache/default.nix b/pkgs/development/python-modules/backports_functools_lru_cache/default.nix
index 0def8a2de2a0..bcaa844720bd 100644
--- a/pkgs/development/python-modules/backports_functools_lru_cache/default.nix
+++ b/pkgs/development/python-modules/backports_functools_lru_cache/default.nix
@@ -7,11 +7,11 @@
 
 if !(pythonOlder "3.3") then null else buildPythonPackage rec {
   pname = "backports.functools_lru_cache";
-  version = "1.4";
+  version = "1.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "31f235852f88edc1558d428d890663c49eb4514ffec9f3650e7f3c9e4a12e36f";
+    sha256 = "9d98697f088eb1b0fa451391f91afb5e3ebde16bbdb272819fd091151fda4f1a";
   };
 
   buildInputs = [ setuptools_scm ];
diff --git a/pkgs/development/python-modules/bibtexparser/default.nix b/pkgs/development/python-modules/bibtexparser/default.nix
index 74b1062cea44..50e389a9e14b 100644
--- a/pkgs/development/python-modules/bibtexparser/default.nix
+++ b/pkgs/development/python-modules/bibtexparser/default.nix
@@ -5,12 +5,12 @@
 
 buildPythonPackage rec {
   pname = "bibtexparser";
-  version = "0.6.2";
+  version = "1.0.1";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "5888219ac5db1c63ae0ad4db52ec7ad87fe7a32bd60e62ee87bceedb8ebf73b8";
+    sha256 = "cc41cdd8332c2bf44b97daf1f135f4f267c3b744c33976655cd270b66f964c0a";
   };
 
   # No tests in archive
diff --git a/pkgs/development/python-modules/bokeh/default.nix b/pkgs/development/python-modules/bokeh/default.nix
index e3c77fa65cf4..66a5a542bf1e 100644
--- a/pkgs/development/python-modules/bokeh/default.nix
+++ b/pkgs/development/python-modules/bokeh/default.nix
@@ -34,11 +34,11 @@
 buildPythonPackage rec {
   pname = "bokeh";
   name = "${pname}${version}";
-  version = "0.12.13";
+  version = "0.12.14";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "6e28cbfd88de0c459435278b75f9982591ec0aaa3d37a195052645e1c62e89e3";
+    sha256 = "42abada2e484d2d5b290d14a943e1c3cd7adabd39933b5f074f57b6cf7920a87";
   };
 
   disabled = isPyPy;
diff --git a/pkgs/development/python-modules/botocore/default.nix b/pkgs/development/python-modules/botocore/default.nix
index 8f9c0fd74e6b..e363136615ea 100644
--- a/pkgs/development/python-modules/botocore/default.nix
+++ b/pkgs/development/python-modules/botocore/default.nix
@@ -12,11 +12,11 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "botocore";
-  version = "1.8.33";
+  version = "1.8.45";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "fa29ea54f26b1193682332d3b4cdde7aa79b4eaccb23f70e88672509c24546f4";
+    sha256 = "8f91b648a216dc945783d1539c013fc08a9e65ecc4fc5aae017bdd5961fd3468";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/bpython/default.nix b/pkgs/development/python-modules/bpython/default.nix
index f9ab331a3f64..ad80e5647a48 100644
--- a/pkgs/development/python-modules/bpython/default.nix
+++ b/pkgs/development/python-modules/bpython/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "bpython";
-  version = "0.17";
+  version = "0.17.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1mbah208jhd7bsfaa17fwpi55f7fvif0ghjwgrjmpmx8w1vqab9l";
+    sha256 = "8907c510bca3c4d9bc0a157279bdc5e3b739cc68c0f247167279b6fe4becb02f";
   };
 
   propagatedBuildInputs = [ curtsies greenlet pygments requests urwid ];
diff --git a/pkgs/development/python-modules/buildout-nix/default.nix b/pkgs/development/python-modules/buildout-nix/default.nix
index 43a0a42f8e93..c4cde583f05b 100644
--- a/pkgs/development/python-modules/buildout-nix/default.nix
+++ b/pkgs/development/python-modules/buildout-nix/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "zc.buildout";
-  version = "2.10.0";
+  version = "2.11.0";
   name = "${pname}-nix-${version}";
 
   src = fetchurl {
     url = "mirror://pypi/${builtins.substring 0 1 pname}/${pname}/${pname}-${version}.tar.gz";
-    sha256 = "00wi0f6wpfl2gywr02x2yqvx6i1k0ll5w4lhdl0khijk4g7mk8dq";
+    sha256 = "092b0a147d5fb4e79ee0afde665570f85738e714463854f9e4f7f38d0b27ea82";
   };
 
   patches = [ ./nix.patch ];
diff --git a/pkgs/development/python-modules/celery/default.nix b/pkgs/development/python-modules/celery/default.nix
new file mode 100644
index 000000000000..44613dd4e5bc
--- /dev/null
+++ b/pkgs/development/python-modules/celery/default.nix
@@ -0,0 +1,30 @@
+{ stdenv, buildPythonPackage, fetchPypi, iana-etc, libredirect,
+  pytest, case, kombu, billiard, pytz, anyjson, amqp, eventlet
+}: 
+buildPythonPackage rec {
+  pname = "celery";
+  version = "4.1.0";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0dcb0s6kdcd3vc9pwvazngppkdbhwpmpjmghq6rifsld34q3gzvp";
+  };
+
+  # make /etc/protocols accessible to fix socket.getprotobyname('tcp') in sandbox
+  preCheck = ''
+    export NIX_REDIRECTS=/etc/protocols=${iana-etc}/etc/protocols \
+      LD_PRELOAD=${libredirect}/lib/libredirect.so
+  '';
+  postCheck = ''
+    unset NIX_REDIRECTS LD_PRELOAD
+  '';
+
+  buildInputs = [ pytest case ];
+  propagatedBuildInputs = [ kombu billiard pytz anyjson amqp eventlet ];
+
+  meta = with stdenv.lib; {
+    homepage = https://github.com/celery/celery/;
+    description = "Distributed task queue";
+    license = licenses.bsd3;
+  };
+}
diff --git a/pkgs/development/python-modules/celery/fix_endless_python3.6_loop_logger_isa.patch b/pkgs/development/python-modules/celery/fix_endless_python3.6_loop_logger_isa.patch
deleted file mode 100644
index 27caa80dd4ca..000000000000
--- a/pkgs/development/python-modules/celery/fix_endless_python3.6_loop_logger_isa.patch
+++ /dev/null
@@ -1,18 +0,0 @@
-Description: Fix endless loop in logger_isa (Python 3.6)
-Author: George Psarakis <giwrgos.psarakis@gmail.com>
-Origin: upstream, https://github.com/celery/celery/commit/9c950b47eca2b4e93fd2fe52cf80f158e6cf97ad
-Forwarded: not-needed
-Reviewed-By: Nishanth Aravamudan <nish.aravamudan@canonical.com>
-Last-Update: 2017-06-12
-
---- celery-4.0.2.orig/celery/utils/log.py
-+++ celery-4.0.2/celery/utils/log.py
-@@ -82,7 +82,7 @@ def logger_isa(l, p, max=1000):
-         else:
-             if this in seen:
-                 raise RuntimeError(
--                    'Logger {0!r} parents recursive'.format(l),
-+                    'Logger {0!r} parents recursive'.format(l.name),
-                 )
-             seen.add(this)
-             this = this.parent
diff --git a/pkgs/development/python-modules/cffi/default.nix b/pkgs/development/python-modules/cffi/default.nix
index 28d4a36aca7e..5e186a8f2f8d 100644
--- a/pkgs/development/python-modules/cffi/default.nix
+++ b/pkgs/development/python-modules/cffi/default.nix
@@ -32,6 +32,7 @@ if isPyPy then null else buildPythonPackage rec {
   # The tests use -Werror but with python3.6 clang detects some unreachable code.
   NIX_CFLAGS_COMPILE = stdenv.lib.optionals stdenv.cc.isClang [ "-Wno-unused-command-line-argument" "-Wno-unreachable-code" ];
 
+  doCheck = !stdenv.hostPlatform.isMusl; # TODO: Investigate
   checkPhase = ''
     py.test
   '';
diff --git a/pkgs/development/python-modules/chainer/default.nix b/pkgs/development/python-modules/chainer/default.nix
index 06a455176a2a..b7a58f11a15b 100644
--- a/pkgs/development/python-modules/chainer/default.nix
+++ b/pkgs/development/python-modules/chainer/default.nix
@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "chainer";
-  version = "3.2.0";
+  version = "3.3.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0mbc8kwk7pvg03bf0j57a48gr6rsdg4lzmyj0dak8y2l4lmyskpw";
+    sha256 = "0669375e5b09d687781a37d6c025ee0a6015f575b4d2c70a2ad09c33b8228f86";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/channels/default.nix b/pkgs/development/python-modules/channels/default.nix
index e5c92ffcde26..46692999a498 100644
--- a/pkgs/development/python-modules/channels/default.nix
+++ b/pkgs/development/python-modules/channels/default.nix
@@ -4,11 +4,11 @@
 buildPythonPackage rec {
   pname = "channels";
   name = "${pname}-${version}";
-  version = "1.1.8";
+  version = "2.0.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0gsy3hwn1vd709jkw8ay44qrm6aw7qggr312z8xwzq0x4ihjda02";
+    sha256 = "5d41e0f2aa40f9755f36c2c1dd83748b6793732190d577922e06294a3b37fd92";
   };
 
   # Files are missing in the distribution
diff --git a/pkgs/development/python-modules/chardet/default.nix b/pkgs/development/python-modules/chardet/default.nix
index 7e50dca40660..1f452fb461a4 100644
--- a/pkgs/development/python-modules/chardet/default.nix
+++ b/pkgs/development/python-modules/chardet/default.nix
@@ -2,7 +2,6 @@
 , pytest, pytestrunner, hypothesis }:
 
 buildPythonPackage rec {
-  name = "${pname}-${version}";
   pname = "chardet";
   version = "3.0.4";
 
@@ -11,7 +10,7 @@ buildPythonPackage rec {
     sha256 = "1bpalpia6r5x1kknbk11p1fzph56fmmnp405ds8icksd3knr5aw4";
   };
 
-  buildInputs = [ pytest pytestrunner hypothesis ];
+  checkInputs = [ pytest pytestrunner hypothesis ];
 
   meta = with stdenv.lib; {
     homepage = https://github.com/chardet/chardet;
diff --git a/pkgs/development/python-modules/cherrypy/default.nix b/pkgs/development/python-modules/cherrypy/default.nix
index 5711cdba2b5b..5167cc443194 100644
--- a/pkgs/development/python-modules/cherrypy/default.nix
+++ b/pkgs/development/python-modules/cherrypy/default.nix
@@ -7,11 +7,11 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "CherryPy";
-  version = "13.1.0";
+  version = "14.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0pb9mfmhns33jq4nrd38mv88ha74fj3q0y2mm8qsjh7ywphvk9ap";
+    sha256 = "5f5ee020d6547a8d452b3560775ca2374ffe2ff8c0aec1b272e93b6af80d850e";
   };
 
   propagatedBuildInputs = [ cheroot portend routes six ];
diff --git a/pkgs/development/python-modules/click-threading/default.nix b/pkgs/development/python-modules/click-threading/default.nix
index 5be41007c6a9..3fe2af19fef9 100644
--- a/pkgs/development/python-modules/click-threading/default.nix
+++ b/pkgs/development/python-modules/click-threading/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "click-threading";
-  version = "0.4.2";
+  version = "0.4.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "400b0bb63d9096b6bf2806efaf742a1cc8b6c88e0484f0afe7d7a7f0e9870609";
+    sha256 = "b2b0fada5bf184b56afaccc99d0d2548d8ab07feb2e95e29e490f6b99c605de7";
   };
 
   checkInputs = [ pytest ];
diff --git a/pkgs/development/python-modules/configargparse/default.nix b/pkgs/development/python-modules/configargparse/default.nix
index 9540b0599315..6a52076252e8 100644
--- a/pkgs/development/python-modules/configargparse/default.nix
+++ b/pkgs/development/python-modules/configargparse/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "ConfigArgParse";
-  version = "0.12.0";
+  version = "0.13.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0fgkiqh6r3rbkdq3k8c48m85g52k96686rw3a6jg4lcncrkpvk98";
+    sha256 = "e6441aa58e23d3d122055808e5e2220fd742dff6e1e51082d2a4e4ed145dd788";
   };
 
   # no tests in tarball
diff --git a/pkgs/development/python-modules/coverage/default.nix b/pkgs/development/python-modules/coverage/default.nix
index 1c58ecb9aa61..8b85a0d94c5a 100644
--- a/pkgs/development/python-modules/coverage/default.nix
+++ b/pkgs/development/python-modules/coverage/default.nix
@@ -7,12 +7,12 @@
 
 buildPythonPackage rec {
   pname = "coverage";
-  version = "4.4.2";
+  version = "4.5.1";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "309d91bd7a35063ec7a0e4d75645488bfab3f0b66373e7722f23da7f5b0f34cc";
+    sha256 = "56e448f051a201c5ebbaa86a5efd0ca90d327204d8b059ab25ad0f35fbfd79f1";
   };
 
   # No tests in archive
diff --git a/pkgs/development/python-modules/cryptography/default.nix b/pkgs/development/python-modules/cryptography/default.nix
new file mode 100644
index 000000000000..606b174a514d
--- /dev/null
+++ b/pkgs/development/python-modules/cryptography/default.nix
@@ -0,0 +1,67 @@
+{ stdenv
+, buildPythonPackage
+, fetchPypi
+, openssl
+, cryptography_vectors
+, darwin
+, idna
+, asn1crypto
+, packaging
+, six
+, pythonOlder
+, enum34
+, ipaddress
+, isPyPy
+, cffi
+, pytest
+, pretend
+, iso8601
+, pytz
+, hypothesis
+}:
+
+let
+  version = "2.1.4";
+in assert version == cryptography_vectors.version; buildPythonPackage rec {
+  # also bump cryptography_vectors
+  pname = "cryptography";
+  inherit version;
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "e4d967371c5b6b2e67855066471d844c5d52d210c36c28d49a8507b96e2c5291";
+  };
+
+  outputs = [ "out" "dev" ];
+
+  buildInputs = [ openssl cryptography_vectors ]
+             ++ stdenv.lib.optional stdenv.isDarwin darwin.apple_sdk.frameworks.Security;
+  propagatedBuildInputs = [
+    idna
+    asn1crypto
+    packaging
+    six
+  ] ++ stdenv.lib.optional (pythonOlder "3.4") enum34
+  ++ stdenv.lib.optional (pythonOlder "3.3") ipaddress
+  ++ stdenv.lib.optional (!isPyPy) cffi;
+
+  checkInputs = [
+    pytest
+    pretend
+    iso8601
+    pytz
+    hypothesis
+  ];
+
+  # The test assumes that if we're on Sierra or higher, that we use `getentropy`, but for binary
+  # compatibility with pre-Sierra for binary caches, we hide that symbol so the library doesn't
+  # use it. This boils down to them checking compatibility with `getentropy` in two different places,
+  # so let's neuter the second test.
+  postPatch = ''
+    substituteInPlace ./tests/hazmat/backends/test_openssl.py --replace '"16.0"' '"99.0"'
+  '';
+
+  # IOKit's dependencies are inconsistent between OSX versions, so this is the best we
+  # can do until nix 1.11's release
+  __impureHostDeps = [ "/usr/lib" ];
+}
\ No newline at end of file
diff --git a/pkgs/development/python-modules/cryptography_vectors/default.nix b/pkgs/development/python-modules/cryptography_vectors/default.nix
new file mode 100644
index 000000000000..ce272d29ca19
--- /dev/null
+++ b/pkgs/development/python-modules/cryptography_vectors/default.nix
@@ -0,0 +1,18 @@
+{ buildPythonPackage
+, fetchPypi
+, cryptography
+}:
+
+buildPythonPackage rec {
+  # also bump cryptography
+  pname = "cryptography_vectors";
+  version = "2.1.4";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "78c4b4f3f84853ea5d038e2f53d355229dd8119fe9cf949c3e497c85c760a5ca";
+  };
+
+  # No tests included
+  doCheck = false;
+}
\ No newline at end of file
diff --git a/pkgs/development/python-modules/cupy/default.nix b/pkgs/development/python-modules/cupy/default.nix
index 6ac91c0aa255..e020eafc04c8 100644
--- a/pkgs/development/python-modules/cupy/default.nix
+++ b/pkgs/development/python-modules/cupy/default.nix
@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "cupy";
-  version = "2.2.0";
+  version = "2.3.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0si0ri8azxvxh3lpm4l4g60jf4nwzibi53yldbdbzb1svlqq060r";
+    sha256 = "7426f6332cb01513d2a6a687792dfa17c678ff64dd1b19b04559ddd5672c833f";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/curtsies/default.nix b/pkgs/development/python-modules/curtsies/default.nix
index d9505b384af8..8d6052c5299f 100644
--- a/pkgs/development/python-modules/curtsies/default.nix
+++ b/pkgs/development/python-modules/curtsies/default.nix
@@ -2,10 +2,10 @@
 
 buildPythonPackage rec {
   pname = "curtsies";
-  version = "0.2.11";
+  version = "0.3.0";
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1vljmw3sy6lrqahhpyg4gk13mzcx3mwhvg8s41698ms3cpgkjipc";
+    sha256 = "89c802ec051d01dec6fc983e9856a3706e4ea8265d2940b1f6d504a9e26ed3a9";
   };
 
   propagatedBuildInputs = [ blessings wcwidth pyte ];
diff --git a/pkgs/development/python-modules/daphne/default.nix b/pkgs/development/python-modules/daphne/default.nix
index f819a234146b..86b00ca74085 100644
--- a/pkgs/development/python-modules/daphne/default.nix
+++ b/pkgs/development/python-modules/daphne/default.nix
@@ -4,11 +4,11 @@
 buildPythonPackage rec {
   pname = "daphne";
   name = "${pname}-${version}";
-  version = "1.4.2";
+  version = "2.0.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "302725f223853b05688f28c361e050f8db9568b1ce27340c76272c26b49e6d72";
+    sha256 = "bb2075ce35ca00f2e5440cc034dfebd5c00d346de62ea45f099db089b868c31f";
   };
 
   buildInputs = [ hypothesis ];
diff --git a/pkgs/development/python-modules/dask/default.nix b/pkgs/development/python-modules/dask/default.nix
index 79e423d4847b..8a8437767d80 100644
--- a/pkgs/development/python-modules/dask/default.nix
+++ b/pkgs/development/python-modules/dask/default.nix
@@ -12,12 +12,12 @@
 
 buildPythonPackage rec {
   pname = "dask";
-  version = "0.16.1";
+  version = "0.17.0";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "07a0609ce053c8c2675037e6d5242899f90ecfb5262e1d0b2d7264fe8814099c";
+    sha256 = "4d2b0754d16ddc3f87026c1fc4fa3b589d7604a41d3f6510268f172abc1d0a5e";
   };
 
   checkInputs = [ pytest ];
diff --git a/pkgs/development/python-modules/dateparser/default.nix b/pkgs/development/python-modules/dateparser/default.nix
index b73a1e9ec7fc..fdc408e1c4c1 100644
--- a/pkgs/development/python-modules/dateparser/default.nix
+++ b/pkgs/development/python-modules/dateparser/default.nix
@@ -1,41 +1,40 @@
-{ stdenv, fetchFromGitHub, buildPythonPackage, isPy3k
+{ lib, fetchPypi, buildPythonPackage, isPy3k
 , nose
-, nose-parameterized
+, parameterized
 , mock
 , glibcLocales
 , six
 , jdatetime
-, pyyaml
 , dateutil
 , umalqurra
 , pytz
 , tzlocal
 , regex
 , ruamel_yaml }:
+
 buildPythonPackage rec {
   pname = "dateparser";
-  version = "0.6.0";
+  version = "0.7.0";
 
-  src = fetchFromGitHub {
-    owner = "scrapinghub";
-    repo = pname;
-    rev = "refs/tags/v${version}";
-    sha256 = "0q2vyzvlj46r6pr0s6m1a0md1cpg9nv1n3xw286l4x2cc7fj2g3y";
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "940828183c937bcec530753211b70f673c0a9aab831e43273489b310538dff86";
   };
 
-  # Upstream Issue: https://github.com/scrapinghub/dateparser/issues/364
-  disabled = isPy3k;
-
-  checkInputs = [ nose nose-parameterized mock glibcLocales ];
+  checkInputs = [ nose mock parameterized six glibcLocales ];
   preCheck =''
     # skip because of missing convertdate module, which is an extra requirement
     rm tests/test_jalali.py
   '';
 
-  propagatedBuildInputs = [ six jdatetime pyyaml dateutil
-            umalqurra pytz tzlocal regex ruamel_yaml ];
+  propagatedBuildInputs = [
+    # install_requires
+    dateutil pytz regex tzlocal
+    # extra_requires
+    jdatetime ruamel_yaml umalqurra
+  ];
 
-  meta = with stdenv.lib;{
+  meta = with lib; {
     description = "Date parsing library designed to parse dates from HTML pages";
     homepage = https://github.com/scrapinghub/dateparser;
     license = licenses.bsd3;
diff --git a/pkgs/development/python-modules/dendropy/default.nix b/pkgs/development/python-modules/dendropy/default.nix
new file mode 100644
index 000000000000..a455db96c22b
--- /dev/null
+++ b/pkgs/development/python-modules/dendropy/default.nix
@@ -0,0 +1,34 @@
+{ lib
+, pkgs
+, buildPythonPackage
+, fetchPypi
+}:
+
+buildPythonPackage rec {
+  pname   = "DendroPy";
+  version = "4.3.0";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "bd5b35ce1a1c9253209b7b5f3939ac22beaa70e787f8129149b4f7ffe865d510";
+  };
+
+  prePatch = ''
+    # Test removed/disabled and reported upstream: https://github.com/jeetsukumaran/DendroPy/issues/74
+    rm -f dendropy/test/test_dataio_nexml_reader_tree_list.py
+  '';
+
+  preCheck = ''
+    # Needed for unicode python tests
+    export LC_ALL="en_US.UTF-8"
+  '';
+
+  checkInputs = [ pkgs.glibcLocales ];
+
+  meta = {
+    homepage = http://dendropy.org/;
+    description = "A Python library for phylogenetic computing";
+    maintainers = with lib.maintainers; [ unode ];
+    license = lib.licenses.bsd3;
+  };
+}
diff --git a/pkgs/development/python-modules/dicttoxml/default.nix b/pkgs/development/python-modules/dicttoxml/default.nix
new file mode 100644
index 000000000000..7d30aad69c45
--- /dev/null
+++ b/pkgs/development/python-modules/dicttoxml/default.nix
@@ -0,0 +1,23 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+}:
+
+buildPythonPackage rec {
+  pname = "dicttoxml";
+  version = "1.7.4";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "ea44cc4ec6c0f85098c57a431a1ee891b3549347b07b7414c8a24611ecf37e45";
+  };
+
+  # No tests in archive
+  doCheck = false;
+
+  meta = {
+    description = "Converts a Python dictionary or other native data type into a valid XML string";
+    homepage = https://github.com/quandyfactory/dicttoxml;
+    license = lib.licenses.gpl2;
+  };
+}
\ No newline at end of file
diff --git a/pkgs/development/python-modules/django-polymorphic/default.nix b/pkgs/development/python-modules/django-polymorphic/default.nix
index e2fedfdaaf3e..8cb68ed1e7dc 100644
--- a/pkgs/development/python-modules/django-polymorphic/default.nix
+++ b/pkgs/development/python-modules/django-polymorphic/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "django-polymorphic";
-  version = "1.3";
+  version = "2.0.2";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "8737b465ebf5fad772b4c52272189c352f5904f468d298584a3469187e3207ad";
+    sha256 = "e1821d7b5874509a158a0f22bebf544330e0944c481c5a3e6da6cac8887e4e88";
   };
 
   checkInputs = [ django ];
diff --git a/pkgs/development/python-modules/docker_compose/default.nix b/pkgs/development/python-modules/docker_compose/default.nix
index e6be57c8b52d..711babe9518e 100644
--- a/pkgs/development/python-modules/docker_compose/default.nix
+++ b/pkgs/development/python-modules/docker_compose/default.nix
@@ -6,12 +6,12 @@
 , enum34, functools32,
 }:
 buildPythonApplication rec {
-  version = "1.18.0";
+  version = "1.19.0";
   pname = "docker-compose";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "2930cbfe2685018fbb75377600ab6288861d9955717b3f14212f63950351d379";
+    sha256 = "f227e0e4b7d88aaf8f892b03a2068942c56ea16bcf2a0fb9fe2a3a071c5fef0b";
   };
 
   # lots of networking and other fails
diff --git a/pkgs/development/python-modules/edward/default.nix b/pkgs/development/python-modules/edward/default.nix
index d29174209a9d..b09bef9fec4e 100644
--- a/pkgs/development/python-modules/edward/default.nix
+++ b/pkgs/development/python-modules/edward/default.nix
@@ -3,14 +3,14 @@
 
 buildPythonPackage rec {
   pname = "edward";
-  version = "1.3.4";
+  version = "1.3.5";
   name  = "${pname}-${version}";
 
   disabled = !(isPy27 || pythonAtLeast "3.4");
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "10d6d7886235f4b9fa4ba401daef87c27937a04d2763f507643d730e51de37b6";
+    sha256 = "3818b39e77c26fc1a37767a74fdd5e7d02877d75ed901ead2f40bd03baaa109f";
   };
 
   # disabled for now due to Tensorflow trying to create files in $HOME:
diff --git a/pkgs/development/python-modules/eve/default.nix b/pkgs/development/python-modules/eve/default.nix
index fe6daf73339f..664322362b25 100644
--- a/pkgs/development/python-modules/eve/default.nix
+++ b/pkgs/development/python-modules/eve/default.nix
@@ -3,12 +3,12 @@
 
 buildPythonPackage rec {
   pname = "Eve";
-  version = "0.7.6";
+  version = "0.7.8";
   name  = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1ba84ab471bc2203a728fe4707a9279c44420224180b418601778125f51577ff";
+    sha256 = "af373ab7b9611990d39b090eed372a0860d4e12a1c8a6ef49fdee29e4626053f";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/faulthandler/default.nix b/pkgs/development/python-modules/faulthandler/default.nix
index ee2a65e981ca..1fc1aea94d57 100644
--- a/pkgs/development/python-modules/faulthandler/default.nix
+++ b/pkgs/development/python-modules/faulthandler/default.nix
@@ -1,7 +1,6 @@
-{ stdenv, fetchPypi, buildPythonPackage }:
+{ stdenv, fetchPypi, buildPythonPackage, fetchpatch }:
 
 buildPythonPackage rec {
-  name = "${pname}-${version}";
   pname = "faulthandler";
   version = "3.0";
 
@@ -10,6 +9,17 @@ buildPythonPackage rec {
     sha256 = "acc10e10909f0f956ba1b42b6c450ea0bdaaa27b3942899f65931396cfcdd36a";
   };
 
+  patches = [
+    (fetchpatch {
+      url = https://github.com/vstinner/faulthandler/commit/67b661e.patch;
+      sha256 = "1nn8c9nq5qypja949hzz0n4yprsyr63wihf5g3gwrinm2nkjnnv7";
+    })
+    (fetchpatch {
+      url = https://github.com/vstinner/faulthandler/commit/07cbb7b.patch;
+      sha256 = "0fh6rjyjw7z1hsiy3sgdc8j9mncg1vlv3y0h4bplqyw18vq3srb3";
+    })
+  ];
+
   meta = {
     description = "Dump the Python traceback";
     license = stdenv.lib.licenses.bsd2;
diff --git a/pkgs/development/python-modules/filelock/default.nix b/pkgs/development/python-modules/filelock/default.nix
index 5d617ba9369b..46d26e80d563 100644
--- a/pkgs/development/python-modules/filelock/default.nix
+++ b/pkgs/development/python-modules/filelock/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "filelock";
-  version = "3.0.0";
+  version = "3.0.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "b3ad481724adfb2280773edd95ce501e497e88fa4489c6e41e637ab3fd9a456c";
+    sha256 = "011327d4ed939693a5b28c0fdf2fd9bda1f68614c1d6d0643a89382ce9843a71";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/python-modules/fiona/default.nix b/pkgs/development/python-modules/fiona/default.nix
index 1fc7ae5aa582..bd249dea5d24 100644
--- a/pkgs/development/python-modules/fiona/default.nix
+++ b/pkgs/development/python-modules/fiona/default.nix
@@ -5,12 +5,12 @@
 
 buildPythonPackage rec {
   pname = "Fiona";
-  version = "1.7.11";
+  version = "1.7.11.post1";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "5e9c68ea71e9d79fcfb68c9a101c0b133301e233c9bcca7b7c65f33cc7636ef5";
+    sha256 = "35df044fa805e6b420450f5d4281fc0edf96e1da0545c31032045cd3cfad3abf";
   };
 
   buildInputs = [
diff --git a/pkgs/development/python-modules/flake8-debugger/default.nix b/pkgs/development/python-modules/flake8-debugger/default.nix
index aab914330880..9d69c0389b69 100644
--- a/pkgs/development/python-modules/flake8-debugger/default.nix
+++ b/pkgs/development/python-modules/flake8-debugger/default.nix
@@ -3,10 +3,10 @@
 buildPythonPackage rec {
   pname = "flake8-debugger";
   name = "${pname}-${version}";
-  version = "3.0.0";
+  version = "3.1.0";
   src = fetchurl {
     url = "mirror://pypi/f/flake8-debugger/${name}.tar.gz";
-    sha256 = "e5c8ac980d819db2f3fbb89fe0e43a2fe6c127edd6ce4984a3f7e0bbdac3d2d4";
+    sha256 = "be4fb88de3ee8f6dd5053a2d347e2c0a2b54bab6733a2280bb20ebd3c4ca1d97";
   };
   buildInputs = [ nose ];
   propagatedBuildInputs = [ flake8 ];
diff --git a/pkgs/development/python-modules/fonttools/default.nix b/pkgs/development/python-modules/fonttools/default.nix
index 80fc3893f17c..a8a89f0e8ca7 100644
--- a/pkgs/development/python-modules/fonttools/default.nix
+++ b/pkgs/development/python-modules/fonttools/default.nix
@@ -7,12 +7,12 @@
 
 buildPythonPackage rec {
   pname = "fonttools";
-  version = "3.21.2";
+  version = "3.22.0";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "96b636793c806206b1925e21224f4ab2ce5bea8ae0990ed181b8ac8d30848f47";
+    sha256 = "01640dfbc0ba752181b21fe74240b8a7bbf7af75581737245836ada5565bd549";
     extension = "zip";
   };
 
diff --git a/pkgs/development/python-modules/fpdf/default.nix b/pkgs/development/python-modules/fpdf/default.nix
new file mode 100644
index 000000000000..c09d54ad5555
--- /dev/null
+++ b/pkgs/development/python-modules/fpdf/default.nix
@@ -0,0 +1,21 @@
+{ stdenv, lib, writeText, buildPythonPackage, fetchPypi }:
+
+buildPythonPackage rec {
+  pname = "fpdf";
+  version = "1.7.2";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0yb73c2clv581sgak5jvlvkj4wy3jav6ms5ia8jx3rw969w40n0j";
+  };
+
+  # No tests available
+  doCheck = false;
+
+  meta = {
+    homepage = https://github.com/reingart/pyfpdf;
+    description = "Simple PDF generation for Python";
+    license = lib.licenses.lgpl3;
+    maintainers = with lib.maintainers; [ geistesk ];
+  };
+}
diff --git a/pkgs/development/python-modules/ftfy/default.nix b/pkgs/development/python-modules/ftfy/default.nix
index e54531017f4c..d88c894009c1 100644
--- a/pkgs/development/python-modules/ftfy/default.nix
+++ b/pkgs/development/python-modules/ftfy/default.nix
@@ -11,11 +11,11 @@ buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "ftfy";
   # latest is 5.1.1, buy spaCy requires 4.4.3
-  version = "5.2.0";
+  version = "5.3.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "b9f84a1437f68ad0bb964fd9da9f6b88d090113ec9e78f290f6d6d0221468e38";
+    sha256 = "0ba702d5138f9b35df32b55920c9466208608108f1f3d5de1a68c17e3d68cb7f";
   };
 
   propagatedBuildInputs = [ html5lib wcwidth];
diff --git a/pkgs/development/python-modules/gensim/default.nix b/pkgs/development/python-modules/gensim/default.nix
index 4edd9ac3e551..0c1ffacd827b 100644
--- a/pkgs/development/python-modules/gensim/default.nix
+++ b/pkgs/development/python-modules/gensim/default.nix
@@ -13,10 +13,10 @@
 buildPythonPackage rec {
   pname = "gensim";
   name = "${pname}-${version}";
-  version = "3.2.0";
+  version = "3.3.0";
   src = fetchPypi {
     inherit pname version;
-    sha256 = "db00b68c6567ba0598d400b917c889e8801adf249170ce0a80ec38187d1b0797";
+    sha256 = "6b2a813887583e63c8cedd26a91782e5f1e416a11f85394a92ae3ff908e0be03";
   };
 
   propagatedBuildInputs = [ smart_open numpy six scipy
diff --git a/pkgs/development/python-modules/globus-sdk/default.nix b/pkgs/development/python-modules/globus-sdk/default.nix
index 4f36a5c1b771..789cfaaea7aa 100644
--- a/pkgs/development/python-modules/globus-sdk/default.nix
+++ b/pkgs/development/python-modules/globus-sdk/default.nix
@@ -10,11 +10,11 @@
 
 buildPythonPackage rec {
   pname = "globus-sdk";
-  version = "1.4.1";
+  version = "1.5.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1nwdhhn9ib5ln56q8h3g42dl93jl67xlxkgl1wqkh7pacg00r4vs";
+    sha256 = "f3ee8294c11f0d1a4430ae7534236c6a6837312f1b4056adbb183a3af663d2be";
   };
 
   checkPhase = ''
diff --git a/pkgs/development/python-modules/google_auth/default.nix b/pkgs/development/python-modules/google_auth/default.nix
index 2076f3c34441..ef101077eaab 100644
--- a/pkgs/development/python-modules/google_auth/default.nix
+++ b/pkgs/development/python-modules/google_auth/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "google-auth";
-  version = "1.3.0";
+  version = "1.4.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d119b5954393d81c4a986ab420cf2c8129fc95ff5c4c6bb8ab5c8f3e6446394f";
+    sha256 = "9051802d3dae256036cca9e34633a32c0ed1427730d4ebc513dff91ec8b6dd45";
   };
 
   checkInputs = [ pytest mock oauth2client flask requests urllib3 pytest-localserver ];
diff --git a/pkgs/development/python-modules/google_cloud_speech/default.nix b/pkgs/development/python-modules/google_cloud_speech/default.nix
index 796bd26febd0..c24e0d88067b 100644
--- a/pkgs/development/python-modules/google_cloud_speech/default.nix
+++ b/pkgs/development/python-modules/google_cloud_speech/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-speech";
-  version = "0.30.0";
+  version = "0.32.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0ckigh6bfzhflhllqdnfygm8w0r6ncp0myf1midifx7sn880g4pa";
+    sha256 = "2513725e693c3a2fdf22cb3065f3fcb39de2ab962a0cbc5de11a3889834189e1";
   };
 
   propagatedBuildInputs = [ setuptools google_api_core google_gax google_cloud_core ];
diff --git a/pkgs/development/python-modules/grpcio/default.nix b/pkgs/development/python-modules/grpcio/default.nix
index c22f2c2f4d7b..d1f0903238c7 100644
--- a/pkgs/development/python-modules/grpcio/default.nix
+++ b/pkgs/development/python-modules/grpcio/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "grpcio";
-  version = "1.8.4";
+  version = "1.9.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "88d87aab9c7889b3ab29dd74aac1a5493ed78b9bf5afba1c069c9dd5531f951d";
+    sha256 = "e7c43b5619deff48cc177c1b0618c4beeb2797f910f160e3c2035d5baf790a5d";
   };
 
   propagatedBuildInputs = [ six protobuf ]
diff --git a/pkgs/development/python-modules/gssapi/default.nix b/pkgs/development/python-modules/gssapi/default.nix
index b075db5ae987..bab965b5a9c1 100644
--- a/pkgs/development/python-modules/gssapi/default.nix
+++ b/pkgs/development/python-modules/gssapi/default.nix
@@ -3,12 +3,12 @@ nose, shouldbe, gss, krb5Full, which, darwin }:
 
 buildPythonPackage rec {
   pname = "gssapi";
-  version = "1.3.0";
+  version = "1.4.1";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "765205082a9490c8e8be88ac16a6249d124396a671665edeec9927a7f244d712";
+    sha256 = "be8f37dd9da726db375b9c693e0a63b391d381d903516e79ecc2a2cc965580e4";
   };
 
   # It's used to locate headers
diff --git a/pkgs/development/python-modules/h5py/default.nix b/pkgs/development/python-modules/h5py/default.nix
index e9bae3f82060..54cfb5dc93ba 100644
--- a/pkgs/development/python-modules/h5py/default.nix
+++ b/pkgs/development/python-modules/h5py/default.nix
@@ -1,6 +1,6 @@
-{ stdenv, fetchurl, python, buildPythonPackage
+{ stdenv, fetchPypi, fetchpatch, python, buildPythonPackage
 , numpy, hdf5, cython, six, pkgconfig
-, mpi4py ? null }:
+, mpi4py ? null, openssh }:
 
 assert hdf5.mpiSupport -> mpi4py != null && hdf5.mpi == mpi4py.mpi;
 
@@ -9,14 +9,12 @@ with stdenv.lib;
 let
   mpi = hdf5.mpi;
   mpiSupport = hdf5.mpiSupport;
-
 in buildPythonPackage rec {
   version = "2.7.1";
   pname = "h5py";
-  name = "${pname}-${version}";
 
-  src = fetchurl {
-    url = "mirror://pypi/h/h5py/${name}.tar.gz";
+  src = fetchPypi {
+    inherit pname version;
     sha256 = "180a688311e826ff6ae6d3bda9b5c292b90b28787525ddfcb10a29d5ddcae2cc";
   };
 
@@ -24,17 +22,25 @@ in buildPythonPackage rec {
 
   postConfigure = ''
     ${python.executable} setup.py configure ${configure_flags}
+
+    # Needed to run the tests reliably. See:
+    # https://bitbucket.org/mpi4py/mpi4py/issues/87/multiple-test-errors-with-openmpi-30
+    ${optionalString mpiSupport "export OMPI_MCA_rmaps_base_oversubscribe=yes"}
   '';
 
   preBuild = if mpiSupport then "export CC=${mpi}/bin/mpicc" else "";
 
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ hdf5 cython ]
-    ++ optional mpiSupport mpi
-    ;
+    ++ optional mpiSupport mpi;
   propagatedBuildInputs = [ numpy six]
-    ++ optional mpiSupport mpi4py
-    ;
+    ++ optionals mpiSupport [ mpi4py openssh ];
+
+  patches = [
+    # Patch is based on upstream patch. The tox.ini hunk had to be removed.
+    # https://github.com/h5py/h5py/commit/5009e062a6f7d4e074cab0fcb42a780ac2b1d7d4.patch
+    ./numpy-1.14.patch
+  ];
 
   meta = {
     description =
diff --git a/pkgs/development/python-modules/h5py/numpy-1.14.patch b/pkgs/development/python-modules/h5py/numpy-1.14.patch
new file mode 100644
index 000000000000..e1db7e05808d
--- /dev/null
+++ b/pkgs/development/python-modules/h5py/numpy-1.14.patch
@@ -0,0 +1,94 @@
+From 5009e062a6f7d4e074cab0fcb42a780ac2b1d7d4 Mon Sep 17 00:00:00 2001
+From: James Tocknell <aragilar@gmail.com>
+Date: Thu, 28 Dec 2017 20:55:55 +1100
+Subject: [PATCH] FIX: Don't reorder compound types, breaks on numpy 1.14
+
+---
+ h5py/h5t.pyx | 25 +++++++------------------
+ setup.py     |  2 +-
+ tox.ini      |  4 ++--
+ 3 files changed, 10 insertions(+), 21 deletions(-)
+
+diff --git a/h5py/h5t.pyx b/h5py/h5t.pyx
+index cc2344e1..7445e9eb 100644
+--- a/h5py/h5t.pyx
++++ b/h5py/h5t.pyx
+@@ -1136,12 +1136,6 @@ cdef class TypeCompoundID(TypeCompositeID):
+         else:
+             if sys.version[0] == '3':
+                 field_names = [x.decode('utf8') for x in field_names]
+-            if len(field_names) > 0:
+-                collated_fields = zip(field_names, field_types, field_offsets)
+-                ordered_fields = sorted(
+-                    collated_fields, key=operator.itemgetter(2))
+-                field_names, field_types, field_offsets = \
+-                    map(list, zip(*ordered_fields))
+             typeobj = dtype({
+                 'names': field_names,
+                 'formats': field_types,
+@@ -1458,8 +1452,7 @@ cdef TypeCompoundID _c_compound(dtype dt, int logical, int aligned):
+     cdef dtype member_dt
+     cdef size_t member_offset = 0
+ 
+-    cdef dict offsets = {}
+-    cdef list fields = []
++    cdef dict fields = {}
+ 
+     # The challenge with correctly converting a numpy/h5py dtype to a HDF5 type
+     # which is composed of subtypes has three aspects we must consider
+@@ -1468,19 +1461,14 @@ cdef TypeCompoundID _c_compound(dtype dt, int logical, int aligned):
+     # 2. For correct round-tripping of aligned dtypes, we need to consider how
+     #   much padding we need by looking at the field offsets
+     # 3. There is no requirement that the offsets be monotonically increasing
+-    #  (so we start by sorting the names as a function of increasing offset)
+     #
+     # The code below tries to cover these aspects
+ 
+-    # Get offsets for each compound member
+-    for name, field in dt.fields.items():
+-        offsets[name] = field[1]
+-
+     # Build list of names, offsets, and types, sorted by increasing offset
+     # (i.e. the position of the member in the struct)
+-    for name in sorted(dt.names, key=offsets.__getitem__):
++    for name in sorted(dt.names, key=(lambda n: dt.fields[n][1])):
+         field = dt.fields[name]
+-        name = name.encode('utf8') if isinstance(name, unicode) else name
++        h5_name = name.encode('utf8') if isinstance(name, unicode) else name
+ 
+         # Get HDF5 data types and set the offset for each member
+         member_dt = field[0]
+@@ -1489,7 +1477,7 @@ cdef TypeCompoundID _c_compound(dtype dt, int logical, int aligned):
+         if aligned and (member_offset > field[1]
+                         or member_dt.itemsize != member_type.get_size()):
+             raise TypeError("Enforced alignment not compatible with HDF5 type")
+-        fields.append((name, member_offset, member_type))
++        fields[name] = (h5_name, member_offset, member_type)
+ 
+         # Update member offset based on the HDF5 type size
+         member_offset += member_type.get_size()
+@@ -1500,8 +1488,9 @@ cdef TypeCompoundID _c_compound(dtype dt, int logical, int aligned):
+ 
+     # Create compound with the necessary size, and insert its members
+     tid = H5Tcreate(H5T_COMPOUND, member_offset)
+-    for (name, member_offset, member_type) in fields:
+-        H5Tinsert(tid, name, member_offset, member_type.id)
++    for name in dt.names:
++        h5_name, member_offset, member_type = fields[name]
++        H5Tinsert(tid, h5_name, member_offset, member_type.id)
+ 
+     return TypeCompoundID(tid)
+ 
+diff --git a/setup.py b/setup.py
+index ec2a78a7..bbb086f6 100755
+--- a/setup.py
++++ b/setup.py
+@@ -32,7 +32,7 @@
+ # these are required to build h5py
+ # RUN_REQUIRES is included as setup.py test needs RUN_REQUIRES for testing
+ # RUN_REQUIRES can be removed when setup.py test is removed
+-SETUP_REQUIRES = RUN_REQUIRES + [NUMPY_DEP, 'Cython>=0.19', 'pkgconfig']
++SETUP_REQUIRES = RUN_REQUIRES + [NUMPY_DEP, 'Cython>=0.23', 'pkgconfig']
+ 
+ # Needed to avoid trying to install numpy/cython on pythons which the latest
+ # versions don't support
diff --git a/pkgs/development/python-modules/habanero/default.nix b/pkgs/development/python-modules/habanero/default.nix
new file mode 100644
index 000000000000..09d82d74f2b1
--- /dev/null
+++ b/pkgs/development/python-modules/habanero/default.nix
@@ -0,0 +1,29 @@
+{ buildPythonPackage, lib, fetchFromGitHub
+, requests
+, nose, vcrpy
+}:
+
+buildPythonPackage rec {
+  pname = "habanero";
+  version = "0.6.0";
+
+  # Install from Pypi is failing because of a missing file (Changelog.rst)
+  src = fetchFromGitHub {
+    owner = "sckott";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "1l2cgl6iiq8jff2w2pib6w8dwaj8344crhwsni2zzq0p44dwi13d";
+  };
+
+  propagatedBuildInputs = [ requests ];
+
+  checkInputs = [ nose vcrpy ];
+  checkPhase = "make test";
+
+  meta = {
+    description = "Python interface to Library Genesis";
+    homepage = http://habanero.readthedocs.io/en/latest/;
+    license = lib.licenses.mit;
+    maintainers = [ lib.maintainers.nico202 ];
+  };
+}
diff --git a/pkgs/development/python-modules/hglib/default.nix b/pkgs/development/python-modules/hglib/default.nix
index 4e96f9389918..8acaf9f06376 100644
--- a/pkgs/development/python-modules/hglib/default.nix
+++ b/pkgs/development/python-modules/hglib/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "python-hglib";
-  version = "2.4";
+  version = "2.5";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0qll9cc9ndqizby00gxdcf6d0cysdhjkr8670a4ffrk55bcnwgb9";
+    sha256 = "fee180bb6796e5d2d25158b2d3c9f048648e427dd28b23a58d369adb14dd67cb";
   };
 
   checkInputs = [ nose ];
diff --git a/pkgs/development/python-modules/hypothesis/default.nix b/pkgs/development/python-modules/hypothesis/default.nix
index 91939d146887..d5ee59ac2d92 100644
--- a/pkgs/development/python-modules/hypothesis/default.nix
+++ b/pkgs/development/python-modules/hypothesis/default.nix
@@ -1,5 +1,5 @@
-{ stdenv, buildPythonPackage, fetchFromGitHub, python
-, pythonOlder, pythonAtLeast, enum34
+{ lib, buildPythonPackage, fetchFromGitHub, python
+, isPy3k, attrs, coverage, enum34
 , doCheck ? true, pytest, pytest_xdist, flake8, flaky, mock
 }:
 buildPythonPackage rec {
@@ -9,20 +9,19 @@ buildPythonPackage rec {
   # pytz fake_factory django numpy pytest
   # If you need these, you can just add them to your environment.
 
-  version = "3.27.0";
+  version = "3.45.2";
   pname = "hypothesis";
-  name = "${pname}-${version}";
 
   # Upstream prefers github tarballs
   src = fetchFromGitHub {
     owner = "HypothesisWorks";
     repo = "hypothesis-python";
-    rev = "${version}";
-    sha256 = "1lvhd8jrwajyc5w1alb9vinsi97fjfqpkxkh8g8j527831lig0j0";
- };
+    rev = version;
+    sha256 = "063sn5m1966gvm3wrlxczdq4vw0r94h3nd9xpr94qxahpg2r4bpb";
+  };
 
-  checkInputs = stdenv.lib.optionals doCheck [ pytest pytest_xdist flake8 flaky mock];
-  propagatedBuildInputs = stdenv.lib.optionals (pythonOlder "3.4") [ enum34 ];
+  checkInputs = [ pytest pytest_xdist flaky mock ];
+  propagatedBuildInputs = [ attrs coverage ] ++ lib.optional (!isPy3k) [ enum34 ];
 
   inherit doCheck;
 
@@ -32,11 +31,7 @@ buildPythonPackage rec {
     py.test tests/cover
   '';
 
-  # Unsupport by upstream on certain versions
-  # https://github.com/HypothesisWorks/hypothesis-python/issues/477
-  disabled = pythonOlder "3.4" && pythonAtLeast "2.8";
-
-  meta = with stdenv.lib; {
+  meta = with lib; {
     description = "A Python library for property based testing";
     homepage = https://github.com/HypothesisWorks/hypothesis;
     license = licenses.mpl20;
diff --git a/pkgs/development/python-modules/i3ipc/default.nix b/pkgs/development/python-modules/i3ipc/default.nix
new file mode 100644
index 000000000000..492c4da6fcc9
--- /dev/null
+++ b/pkgs/development/python-modules/i3ipc/default.nix
@@ -0,0 +1,29 @@
+{ stdenv, buildPythonPackage, fetchFromGitHub
+, enum-compat
+, xorgserver, pytest, i3, python
+}:
+
+buildPythonPackage rec {
+  pname = "i3ipc";
+  version = "1.4.0";
+
+  src = fetchFromGitHub {
+    owner  = "acrisci";
+    repo   = "i3ipc-python";
+    rev    = "v${version}";
+    sha256 = "15drq16ncmjrgsri6gjzp0qm8abycm92nicm78q3k7vy7rqpvfnh";
+  };
+
+  propagatedBuildInputs = [ enum-compat ];
+
+  checkInputs = [ xorgserver pytest i3 ];
+
+  checkPhase = ''${python.interpreter} run-tests.py'';
+
+  meta = with stdenv.lib; {
+    description = "An improved Python library to control i3wm";
+    homepage    = https://github.com/acrisci/i3ipc-python;
+    license     = licenses.bsd3;
+    maintainers = with maintainers; [ vanzef ];
+  };
+}
diff --git a/pkgs/development/python-modules/ipykernel/default.nix b/pkgs/development/python-modules/ipykernel/default.nix
index 330141fcd06e..018a522a591a 100644
--- a/pkgs/development/python-modules/ipykernel/default.nix
+++ b/pkgs/development/python-modules/ipykernel/default.nix
@@ -13,12 +13,12 @@
 
 buildPythonPackage rec {
   pname = "ipykernel";
-  version = "4.8.0";
+  version = "4.8.1";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "dedc199df6a38725c732986dfa606c245fb8fe0fe999b33a0c305b73d80c6774";
+    sha256 = "fe2837622a4121cbe42b354db1e2ab46c91e807ffcb92f4c2cfd323a75f8737f";
   };
 
   buildInputs = [ nose ] ++ lib.optional isPy27 mock;
diff --git a/pkgs/development/python-modules/ipyparallel/default.nix b/pkgs/development/python-modules/ipyparallel/default.nix
index 3e8ea0489207..e4765a29e835 100644
--- a/pkgs/development/python-modules/ipyparallel/default.nix
+++ b/pkgs/development/python-modules/ipyparallel/default.nix
@@ -16,12 +16,12 @@
 
 buildPythonPackage rec {
   pname = "ipyparallel";
-  version = "6.0.2";
+  version = "6.1.1";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "7eea4780266252fcc987b220a302d589fbb4d6b0569bd131115a20b31891103d";
+    sha256 = "f1e03ebb8d17f67f03bafa5d85f220883462f7bd7a97fe904c7d56ffba8534a3";
   };
 
   buildInputs = [ nose ];
diff --git a/pkgs/development/python-modules/ipywidgets/default.nix b/pkgs/development/python-modules/ipywidgets/default.nix
index f77c3570c02f..c504062cba61 100644
--- a/pkgs/development/python-modules/ipywidgets/default.nix
+++ b/pkgs/development/python-modules/ipywidgets/default.nix
@@ -14,12 +14,12 @@
 
 buildPythonPackage rec {
   pname = "ipywidgets";
-  version = "7.1.0";
+  version = "7.1.2";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "3e2be7dea4f97c9a4df71ef065cad9f2e420dd901127bf7cb690fb56d2b34ea3";
+    sha256 = "4263ce721a1e5b53a84c4595a5e296d270ae0dc534401b536f4dda64e0b0ca02";
   };
 
   # Tests are not distributed
diff --git a/pkgs/development/python-modules/jinja2/default.nix b/pkgs/development/python-modules/jinja2/default.nix
index cb0eb130a2f2..7432b3bb99c5 100644
--- a/pkgs/development/python-modules/jinja2/default.nix
+++ b/pkgs/development/python-modules/jinja2/default.nix
@@ -1,16 +1,13 @@
-{ stdenv, buildPythonPackage, fetchFromGitHub
+{ stdenv, buildPythonPackage, fetchPypi
 , pytest, markupsafe }:
 
 buildPythonPackage rec {
   pname = "Jinja2";
-  version = "2.9.6";
-  name = "${pname}-${version}";
+  version = "2.10";
 
-  src = fetchFromGitHub {
-    owner = "pallets";
-    repo = "jinja";
-    rev = version;
-    sha256 = "1xxc5vdhz214aawmllv0fi4ak6d7zac662yb7gn1xfgqfz392pg5";
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "f84be1bb0040caca4cea721fcbbbbd61f9be9464ca236387158b0feea01914a4";
   };
 
   checkInputs = [ pytest ];
@@ -29,7 +26,6 @@ buildPythonPackage rec {
       Django inspired non-XML syntax but supports inline expressions and
       an optional sandboxed environment.
     '';
-    platforms = platforms.all;
     maintainers = with maintainers; [ pierron garbas sjourdois ];
   };
 }
diff --git a/pkgs/development/python-modules/jsonpickle/default.nix b/pkgs/development/python-modules/jsonpickle/default.nix
index 2d9f02a5affb..3a0f72377302 100644
--- a/pkgs/development/python-modules/jsonpickle/default.nix
+++ b/pkgs/development/python-modules/jsonpickle/default.nix
@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "jsonpickle";
-  version = "0.9.5";
+  version = "0.9.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "cc25dc79571d4ad7db59d05ddb7de0d76a8d598cf6136e1dbeaa9361ebcfe749";
+    sha256 = "545b3bee0d65e1abb4baa1818edcc9ec239aa9f2ffbfde8084d71c056180054f";
   };
 
   doCheck = false;
diff --git a/pkgs/development/python-modules/jupyter_client/default.nix b/pkgs/development/python-modules/jupyter_client/default.nix
index 42d7752eda3b..d94842ade126 100644
--- a/pkgs/development/python-modules/jupyter_client/default.nix
+++ b/pkgs/development/python-modules/jupyter_client/default.nix
@@ -11,19 +11,20 @@
 , ipython
 , mock
 , pytest
+, tornado
 }:
 
 buildPythonPackage rec {
   pname = "jupyter_client";
-  version = "5.2.1";
+  version = "5.2.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "462790d46b244f0a631ea5e3cd5cdbad6874d5d24cc0ff512deb7c16cdf8653d";
+    sha256 = "83d5e23132f0d8f79ccd3939f53fb9fa97f88a896a85114dc48d0e86909b06c4";
   };
 
   checkInputs = [ ipykernel ipython mock pytest ];
-  propagatedBuildInputs = [traitlets jupyter_core pyzmq dateutil] ++ lib.optional isPyPy py;
+  propagatedBuildInputs = [traitlets jupyter_core pyzmq dateutil tornado ] ++ lib.optional isPyPy py;
 
   checkPhase = ''
     py.test
diff --git a/pkgs/development/python-modules/kaitaistruct/default.nix b/pkgs/development/python-modules/kaitaistruct/default.nix
index c99619566175..0863cd79f46e 100644
--- a/pkgs/development/python-modules/kaitaistruct/default.nix
+++ b/pkgs/development/python-modules/kaitaistruct/default.nix
@@ -3,11 +3,11 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "kaitaistruct";
-  version = "0.7";
+  version = "0.8";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "19j3snmr0qbd48f7yd3cc21ffv13dahf8ys591dnalbhvnkar71i";
+    sha256 = "d1d17c7f6839b3d28fc22b21295f787974786c2201e8788975e72e2a1d109ff5";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/python-modules/keras/default.nix b/pkgs/development/python-modules/keras/default.nix
index 8ef263cdfa80..4c42a4ebafea 100644
--- a/pkgs/development/python-modules/keras/default.nix
+++ b/pkgs/development/python-modules/keras/default.nix
@@ -5,12 +5,12 @@
 
 buildPythonPackage rec {
   pname = "Keras";
-  version = "2.1.3";
+  version = "2.1.4";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "7ca3a381523bad40a6922e88951a316664cb088fd01cea07e5ec8ada3327e3c7";
+    sha256 = "7ee1fcc79072ac904a4f008d715bcb78c60250ae3cd41d99e268c60ade8d0d3a";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/keyring/default.nix b/pkgs/development/python-modules/keyring/default.nix
index 0f99152766a3..8c97b18e9b61 100644
--- a/pkgs/development/python-modules/keyring/default.nix
+++ b/pkgs/development/python-modules/keyring/default.nix
@@ -6,11 +6,11 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "keyring";
-  version = "10.6.0";
+  version = "11.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "69c2b69d66a0db1165c6875c1833c52f4dc62179959692b30c8c4a4b8390d895";
+    sha256 = "b4607520a7c97be96be4ddc00f4b9dac65f47a45af4b4cd13ed5a8879641d646";
   };
 
   buildInputs = [
diff --git a/pkgs/development/python-modules/libagent/default.nix b/pkgs/development/python-modules/libagent/default.nix
index d6c96534d748..757a171d8381 100644
--- a/pkgs/development/python-modules/libagent/default.nix
+++ b/pkgs/development/python-modules/libagent/default.nix
@@ -5,11 +5,11 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "libagent";
-  version = "0.9.7";
+  version = "0.9.8";
 
   src = fetchPypi{
     inherit pname version;
-    sha256 = "3ae14dc14859f7b4b92583ab0d40884ac07f26dbe00c7b747df2d50f4b1af098";
+    sha256 = "7e7d62cedef9d1291b8e77abc463d50b3d685dfd953611d55a0414c12276aa78";
   };
 
   buildInputs = [
diff --git a/pkgs/development/python-modules/limits/default.nix b/pkgs/development/python-modules/limits/default.nix
index 672cad5bfe17..57f47ff5fd82 100644
--- a/pkgs/development/python-modules/limits/default.nix
+++ b/pkgs/development/python-modules/limits/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "limits";
-  version = "1.2.1";
+  version = "1.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0dfbrmqixsvhvzqgd4s8rfj933k1w5q4bm23pp9zyp70xlb0mfmd";
+    sha256 = "a017b8d9e9da6761f4574642149c337f8f540d4edfe573fb91ad2c4001a2bc76";
   };
 
   propagatedBuildInputs = [ six ];
diff --git a/pkgs/development/python-modules/locustio/default.nix b/pkgs/development/python-modules/locustio/default.nix
index 0e9386f667c5..4bc48810e71d 100644
--- a/pkgs/development/python-modules/locustio/default.nix
+++ b/pkgs/development/python-modules/locustio/default.nix
@@ -2,7 +2,7 @@
 , fetchPypi
 , mock
 , unittest2
-, msgpack
+, msgpack-python
 , requests
 , flask
 , gevent
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     sed -i s/"pyzmq=="/"pyzmq>="/ setup.py
   '';
 
-  propagatedBuildInputs = [ msgpack requests flask gevent pyzmq ];
+  propagatedBuildInputs = [ msgpack-python requests flask gevent pyzmq ];
   buildInputs = [ mock unittest2 ];
 
   meta = {
diff --git a/pkgs/development/python-modules/m2r/default.nix b/pkgs/development/python-modules/m2r/default.nix
index e493596cfa59..c1a6721bb804 100644
--- a/pkgs/development/python-modules/m2r/default.nix
+++ b/pkgs/development/python-modules/m2r/default.nix
@@ -3,11 +3,11 @@
 buildPythonPackage rec {
   pname = "m2r";
   name = "${pname}-${version}";
-  version = "0.1.12";
+  version = "0.1.13";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "adfb86ebb7ff3fcd3ebb27ce8cd6f795c409a13f0c03363e265f17419ce5b9ab";
+    sha256 = "b19e3703a3a897859f01ff6a068ee9a0eea8e8fdf75e896e00e88b3476a12f87";
   };
 
   propagatedBuildInputs = [ mistune docutils ];
diff --git a/pkgs/development/python-modules/magic-wormhole/default.nix b/pkgs/development/python-modules/magic-wormhole/default.nix
index b21643b4547a..9d2d80747a93 100644
--- a/pkgs/development/python-modules/magic-wormhole/default.nix
+++ b/pkgs/development/python-modules/magic-wormhole/default.nix
@@ -22,12 +22,12 @@
 
 buildPythonPackage rec {
   pname = "magic-wormhole";
-  version = "0.10.3";
+  version = "0.10.5";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "48465d58f9c0d729dc586627cf280830e7ed59f9e7999946ae1d763c6b8db999";
+    sha256 = "9558ea1f3551e535deec3462cd5c8391cb32ebb12ecd8b40b36861dbee4917ee";
   };
 
   checkInputs = [ mock ];
diff --git a/pkgs/development/python-modules/matplotlib/default.nix b/pkgs/development/python-modules/matplotlib/default.nix
index 49bdfa8dc087..3579c22e92b9 100644
--- a/pkgs/development/python-modules/matplotlib/default.nix
+++ b/pkgs/development/python-modules/matplotlib/default.nix
@@ -21,13 +21,13 @@ assert enableTk -> (tcl != null)
 assert enableQt -> pyqt4 != null;
 
 buildPythonPackage rec {
-  version = "2.1.1";
+  version = "2.1.2";
   pname = "matplotlib";
   name = "${pname}-${version}";
 
   src = fetchurl {
     url = "mirror://pypi/m/matplotlib/${name}.tar.gz";
-    sha256 = "659f5e1aa0e0f01488c61eff47560c43b8be511c6a29293d7f3896ae17bd8b23";
+    sha256 = "725a3f12739d133adfa381e1b33bd70c6f64db453bfc536e148824816e568894";
   };
 
   NIX_CFLAGS_COMPILE = stdenv.lib.optionalString stdenv.isDarwin "-I${libcxx}/include/c++/v1";
diff --git a/pkgs/development/python-modules/micawber/default.nix b/pkgs/development/python-modules/micawber/default.nix
new file mode 100644
index 000000000000..5e3afe05ea79
--- /dev/null
+++ b/pkgs/development/python-modules/micawber/default.nix
@@ -0,0 +1,26 @@
+{ stdenv, buildPythonPackage, fetchPypi, beautifulsoup4 }:
+
+buildPythonPackage rec {
+  pname = "micawber";
+  version = "0.3.5";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0pnq6j8f144virhri0drgf0058x6qcxfd5yrb0ynbwr8djh326yn";
+  };
+
+  propagatedBuildInputs = [ beautifulsoup4 ];
+
+  meta = with stdenv.lib; {
+    homepage = http://micawber.readthedocs.io/en/latest/;
+    description = "A small library for extracting rich content from urls";
+    license = licenses.mit;
+    longDescription = ''
+      micawber supplies a few methods for retrieving rich metadata
+      about a variety of links, such as links to youtube videos.
+      micawber also provides functions for parsing blocks of text and html
+      and replacing links to videos with rich embedded content.
+    '';
+    maintainers = with maintainers; [ davidak ];
+  };
+}
diff --git a/pkgs/development/python-modules/moinmoin/default.nix b/pkgs/development/python-modules/moinmoin/default.nix
new file mode 100644
index 000000000000..cedd45f2f225
--- /dev/null
+++ b/pkgs/development/python-modules/moinmoin/default.nix
@@ -0,0 +1,32 @@
+{ lib, buildPythonPackage, fetchurl, fetchpatch
+, pytest, werkzeug, pygments
+}:
+
+buildPythonPackage rec {
+  name = "moinmoin-${ver}";
+  ver = "1.9.9";
+
+  src = fetchurl {
+    url = "http://static.moinmo.in/files/moin-${ver}.tar.gz";
+    sha256 = "197ga41qghykmir80ik17f9hjpmixslv3zjgj7bj9qvs1dvdg5s3";
+  };
+
+  patches = [
+    # Recommended to install on their download page.
+    (fetchpatch {
+      url = "https://bitbucket.org/thomaswaldmann/moin-1.9/commits/561b7a9c2bd91b61d26cd8a5f39aa36bf5c6159e/raw";
+      sha256 = "1nscnl9nspnrwyf3n95ig0ihzndryinq9kkghliph6h55cncfc65";
+    })
+    ./fix_tests.patch
+  ];
+
+  checkInputs = [ pytest werkzeug pygments ];
+
+  meta = with lib; {
+    description = "Advanced, easy to use and extensible WikiEngine";
+
+    homepage = "http://moinmo.in/";
+
+    license = licenses.gpl2Plus;
+  };
+}
diff --git a/pkgs/development/python-modules/moinmoin/fix_tests.patch b/pkgs/development/python-modules/moinmoin/fix_tests.patch
new file mode 100644
index 000000000000..e9856eeffca6
--- /dev/null
+++ b/pkgs/development/python-modules/moinmoin/fix_tests.patch
@@ -0,0 +1,16 @@
+diff -ru3 moin-1.9.9-old/MoinMoin/conftest.py moin-1.9.9-new/MoinMoin/conftest.py
+--- moin-1.9.9-old/MoinMoin/conftest.py	2016-10-31 23:44:02.000000000 +0300
++++ moin-1.9.9-new/MoinMoin/conftest.py	2018-02-18 12:13:19.551929093 +0300
+@@ -22,10 +22,11 @@
+ 
+ import atexit
+ import sys
++import os
+ 
+ import py
+ 
+-rootdir = py.magic.autopath().dirpath()
++rootdir = os.path.abspath(os.path.dirname(__file__))
+ moindir = rootdir.join("..")
+ sys.path.insert(0, str(moindir))
+ 
diff --git a/pkgs/development/python-modules/mpi4py/default.nix b/pkgs/development/python-modules/mpi4py/default.nix
index fcbca62ff9df..d4750f252ad0 100644
--- a/pkgs/development/python-modules/mpi4py/default.nix
+++ b/pkgs/development/python-modules/mpi4py/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchPypi, python, buildPythonPackage, mpi }:
+{ stdenv, fetchPypi, python, buildPythonPackage, mpi, openssh }:
 
 buildPythonPackage rec {
   pname = "mpi4py";
@@ -14,6 +14,12 @@ buildPythonPackage rec {
     inherit mpi;
   };
 
+  postPatch = ''
+    substituteInPlace test/test_spawn.py --replace \
+                      "unittest.skipMPI('openmpi(<3.0.0)')" \
+                      "unittest.skipMPI('openmpi')"
+  '';
+
   configurePhase = "";
 
   installPhase = ''
@@ -28,11 +34,15 @@ buildPythonPackage rec {
     # sometimes packages specify where files should be installed outside the usual
     # python lib prefix, we override that back so all infrastructure (setup hooks)
     # work as expected
+
+    # Needed to run the tests reliably. See:
+    # https://bitbucket.org/mpi4py/mpi4py/issues/87/multiple-test-errors-with-openmpi-30
+    export OMPI_MCA_rmaps_base_oversubscribe=yes
   '';
 
   setupPyBuildFlags = ["--mpicc=${mpi}/bin/mpicc"];
 
-  buildInputs = [ mpi ];
+  buildInputs = [ mpi openssh ];
 
   meta = {
     description =
diff --git a/pkgs/development/python-modules/msgpack/default.nix b/pkgs/development/python-modules/msgpack/default.nix
new file mode 100644
index 000000000000..2400a76bd6e1
--- /dev/null
+++ b/pkgs/development/python-modules/msgpack/default.nix
@@ -0,0 +1,28 @@
+{ buildPythonPackage
+, fetchPypi
+, pytest
+, lib
+}:
+
+buildPythonPackage rec {
+  pname = "msgpack";
+  version = "0.5.4";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "13ckbs2qc4dww7fddnm9cw116j4spgxqab49ijmj6jr178ypwl80";
+  };
+
+  checkPhase = ''
+    py.test
+  '';
+
+  checkInputs = [ pytest ];
+
+  meta = {
+    homepage = https://github.com/msgpack/msgpack-python;
+    description = "MessagePack serializer implementation for Python";
+    license = lib.licenses.asl20;
+    # maintainers =  ?? ;
+  };
+}
diff --git a/pkgs/development/python-modules/multidict/default.nix b/pkgs/development/python-modules/multidict/default.nix
index 7eaa0962b44f..38facc966589 100644
--- a/pkgs/development/python-modules/multidict/default.nix
+++ b/pkgs/development/python-modules/multidict/default.nix
@@ -1,8 +1,7 @@
 { lib
 , fetchPypi
 , buildPythonPackage
-, cython
-, pytest, psutil, pytestrunner
+, pytest, pytestrunner
 , isPy3k
 }:
 
@@ -15,8 +14,7 @@ buildPythonPackage rec {
     sha256 = "0liazqlyk2nmr82nhiw2z72j7bjqxaisifkj476msw140d4i4i7v";
   };
 
-  buildInputs = [ cython ];
-  checkInputs = [ pytest psutil pytestrunner ];
+  checkInputs = [ pytest pytestrunner ];
 
   disabled = !isPy3k;
 
diff --git a/pkgs/development/python-modules/mysql-connector/default.nix b/pkgs/development/python-modules/mysql-connector/default.nix
new file mode 100644
index 000000000000..6a2b3de00165
--- /dev/null
+++ b/pkgs/development/python-modules/mysql-connector/default.nix
@@ -0,0 +1,30 @@
+{ lib, buildPythonPackage, fetchFromGitHub
+, protobuf
+}:
+
+buildPythonPackage rec {
+  pname = "mysql-connector";
+  version = "8.0.6";
+
+  src = fetchFromGitHub {
+    owner = "mysql";
+    repo = "mysql-connector-python";
+    rev = version;
+    sha256 = "1ygr7va56da12yp3gr7kzss9zgbs28q2lmdkw16rpxj108id4rkp";
+  };
+
+  propagatedBuildInputs = [ protobuf ];
+
+  doCheck = false;
+
+  meta = {
+    description = "A MySQL driver";
+    longDescription = ''
+      A MySQL driver that does not depend on MySQL C client libraries and
+      implements the DB API v2.0 specification.
+    '';
+    homepage = https://github.com/mysql/mysql-connector-python;
+    license = [ lib.licenses.gpl2 ];
+    maintainers = with lib.maintainers; [ primeos ];
+  };
+}
diff --git a/pkgs/development/python-modules/natsort/default.nix b/pkgs/development/python-modules/natsort/default.nix
index 8e81f923b916..a5940ed6c9f6 100644
--- a/pkgs/development/python-modules/natsort/default.nix
+++ b/pkgs/development/python-modules/natsort/default.nix
@@ -16,9 +16,8 @@
 }:
 
 buildPythonPackage rec {
-  name = "${pname}-${version}";
   pname = "natsort";
-  version = "5.1.1";
+  version = "5.2.0";
 
   buildInputs = [
     hypothesis
@@ -36,11 +35,9 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "9ffbfb74bf3fc3905be1b9b052ed865675651e38fcd972ed1ed5c64a02f93cbd";
+    sha256 = "c960082d2145b04723041c4b85092546560538e29664dd197a1344d5b090bc91";
   };
 
-  patches = lib.optional (isPy35 || isPy36) ./python-3.6.3-test-failures.patch;
-
   # testing based on project's tox.ini
   checkPhase = ''
     pytest --doctest-modules natsort
diff --git a/pkgs/development/python-modules/natsort/python-3.6.3-test-failures.patch b/pkgs/development/python-modules/natsort/python-3.6.3-test-failures.patch
deleted file mode 100644
index b304a1d11e52..000000000000
--- a/pkgs/development/python-modules/natsort/python-3.6.3-test-failures.patch
+++ /dev/null
@@ -1,37 +0,0 @@
-diff --git a/test_natsort/test_string_component_transform_factory.py b/test_natsort/test_string_component_transform_factory.py
-index 6790e51..8db4efb 100644
---- a/test_natsort/test_string_component_transform_factory.py
-+++ b/test_natsort/test_string_component_transform_factory.py
-@@ -24,6 +24,8 @@ from hypothesis.strategies import (
- )
- from compat.locale import bad_uni_chars
- 
-+import pytest
-+
- 
- # Each test has an "example" version for demonstrative purposes,
- # and a test that uses the hypothesis module.
-@@ -77,6 +79,7 @@ def test_string_component_transform_factory_with_LOCALE_returns_fast_int_and_gro
-     assert _string_component_transform_factory(ns.LOCALE)(x) == fast_int(x, key=get_strxfrm())
- 
- 
-+@pytest.mark.xfail
- @given(text())
- def test_string_component_transform_factory_with_LOCALE_returns_fast_int_and_groupletters(x):
-     assume(x)
-@@ -89,6 +92,7 @@ def test_string_component_transform_factory_with_LOCALE_and_GROUPLETTERS_returns
-     assert _string_component_transform_factory(ns.GROUPLETTERS | ns.LOCALE)(x) == fast_int(x, key=lambda x: get_strxfrm()(_groupletters(x)))
- 
- 
-+@pytest.mark.xfail
- @given(text())
- def test_string_component_transform_factory_with_LOCALE_and_GROUPLETTERS_returns_fast_int_and_groupletters_and_locale_convert(x):
-     assume(x)
-@@ -104,6 +108,7 @@ def test_string_component_transform_factory_with_LOCALE_and_DUMB_returns_fast_in
-     assert _string_component_transform_factory(ns._DUMB | ns.LOCALE)(x) == fast_int(x, key=lambda x: get_strxfrm()(_groupletters(x)))
- 
- 
-+@pytest.mark.xfail
- @given(text())
- def test_string_component_transform_factory_with_LOCALE_and_DUMB_returns_fast_int_and_groupletters_and_locale_convert(x):
-     assume(x)
diff --git a/pkgs/development/python-modules/nbxmpp/default.nix b/pkgs/development/python-modules/nbxmpp/default.nix
index 26525adb1c96..295354003baf 100644
--- a/pkgs/development/python-modules/nbxmpp/default.nix
+++ b/pkgs/development/python-modules/nbxmpp/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "nbxmpp";
-  version = "0.6.2";
+  version = "0.6.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "10bfb12b083a7509779298c31b4b61e2ed7e78d1960cbcfb3de8d38f3b830991";
+    sha256 = "dd66e701a4856e3cace8f4865837ccc9bcfcdb286df01f01aa19531f5d834a83";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/python-modules/neovim/default.nix b/pkgs/development/python-modules/neovim/default.nix
new file mode 100644
index 000000000000..6fcd82aca9e5
--- /dev/null
+++ b/pkgs/development/python-modules/neovim/default.nix
@@ -0,0 +1,41 @@
+{ buildPythonPackage
+, fetchPypi
+, lib
+, nose
+, msgpack
+, greenlet
+, trollius
+, pythonOlder
+, isPyPy
+}:
+
+buildPythonPackage rec {
+  pname = "neovim";
+  version = "0.2.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "16vzxmp7f6dl20n30j5cwwvrjj5h3c2ch8ldbss31anf36nirsdp";
+  };
+
+  checkInputs = [ nose ];
+
+  checkPhase = ''
+    nosetests
+  '';
+
+  # Tests require pkgs.neovim,
+  # which we cannot add because of circular dependency.
+  doCheck = false;
+
+  propagatedBuildInputs = [ msgpack ]
+    ++ lib.optional (!isPyPy) greenlet
+    ++ lib.optional (pythonOlder "3.4") trollius;
+
+  meta = {
+    description = "Python client for Neovim";
+    homepage = "https://github.com/neovim/python-client";
+    license = lib.licenses.asl20;
+    maintainers = with lib.maintainers; [ garbas ];
+  };
+}
diff --git a/pkgs/development/python-modules/nipype/default.nix b/pkgs/development/python-modules/nipype/default.nix
index 8ee6eeb104b4..a38f23d5536f 100644
--- a/pkgs/development/python-modules/nipype/default.nix
+++ b/pkgs/development/python-modules/nipype/default.nix
@@ -29,11 +29,11 @@ assert !isPy3k -> configparser != null;
 
 buildPythonPackage rec {
   pname = "nipype";
-  version = "0.14.0";
+  version = "1.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0airdrh93vwmbfkqxp5cqfzm0zzqcvjnvphv3zhg197y39xxpl1k";
+    sha256 = "4c14c6cae1f530f89d76fa8136d52488b1daf3a02179da65121b76eaf4a6f0ea";
   };
 
   doCheck = false;  # fails with TypeError: None is not callable
diff --git a/pkgs/development/python-modules/notebook/default.nix b/pkgs/development/python-modules/notebook/default.nix
index 77ff31934c3f..be5a798b6c6d 100644
--- a/pkgs/development/python-modules/notebook/default.nix
+++ b/pkgs/development/python-modules/notebook/default.nix
@@ -23,11 +23,11 @@
 
 buildPythonPackage rec {
   pname = "notebook";
-  version = "5.3.1";
+  version = "5.4.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "12vk3shylx61whdchxbg71mdlwiw2l31vl227sqwpb0p67bbw2rq";
+    sha256 = "dd431fad9bdd25aa9ff8265da096ef770475e21bf1d327982611a7de5cd904ca";
   };
 
   LC_ALL = "en_US.utf8";
diff --git a/pkgs/development/python-modules/notify2/default.nix b/pkgs/development/python-modules/notify2/default.nix
new file mode 100644
index 000000000000..2d5851929075
--- /dev/null
+++ b/pkgs/development/python-modules/notify2/default.nix
@@ -0,0 +1,29 @@
+{ buildPythonPackage
+, lib
+, fetchPypi
+, pygobject3
+, dbus-python
+}:
+
+buildPythonPackage rec {
+  pname = "notify2";
+  version = "0.3.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0z8rrv9rsg1r2qgh2dxj3dfj5xnki98kgi3w839kqby4a26i1yik";
+  };
+
+
+  # Tests require Xorg and Dbus instance
+  doCheck = false;
+  propagatedBuildInputs = [ pygobject3
+                            dbus-python ]; 
+
+  meta = {
+    description = "Pure Python interface to DBus notifications";
+    homepage = https://bitbucket.org/takluyver/pynotify2;
+    license = lib.licenses.bsd2;
+    maintainers = with lib.maintainers; [ mog ];
+  };
+}
diff --git a/pkgs/development/python-modules/numpy/default.nix b/pkgs/development/python-modules/numpy/default.nix
index 2d575d8742aa..f32f417c3917 100644
--- a/pkgs/development/python-modules/numpy/default.nix
+++ b/pkgs/development/python-modules/numpy/default.nix
@@ -2,13 +2,13 @@
 
 buildPythonPackage rec {
   pname = "numpy";
-  version = "1.13.3";
+  version = "1.14.0";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "36ee86d5adbabc4fa2643a073f93d5504bdfed37a149a3a49f4dde259f35a750";
+    sha256 = "3de643935b212307b420248018323a44ec51987a336d1d747c1322afc3c099fb";
   };
 
   disabled = isPyPy;
diff --git a/pkgs/development/python-modules/numpydoc/default.nix b/pkgs/development/python-modules/numpydoc/default.nix
new file mode 100644
index 000000000000..3af324c87652
--- /dev/null
+++ b/pkgs/development/python-modules/numpydoc/default.nix
@@ -0,0 +1,27 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, nose
+, sphinx
+, jinja2
+}:
+
+buildPythonPackage rec {
+  pname = "numpydoc";
+  version = "0.7.0";
+
+  src = fetchPypi {
+    inherit pname;
+    inherit version;
+    sha256 = "2dc7b2c4e3914745e38e370946fa4c109817331e6d450806285c08bce5cd575a";
+  };
+
+  checkInputs = [ nose ];
+  propagatedBuildInputs = [ sphinx jinja2 ];
+
+  meta = {
+    description = "Sphinx extension to support docstrings in Numpy format";
+    homepage = "https://github.com/numpy/numpydoc";
+    license = lib.licenses.free;
+   };
+}
\ No newline at end of file
diff --git a/pkgs/development/python-modules/oauthenticator/default.nix b/pkgs/development/python-modules/oauthenticator/default.nix
index ecb21404a085..362554b9bb89 100644
--- a/pkgs/development/python-modules/oauthenticator/default.nix
+++ b/pkgs/development/python-modules/oauthenticator/default.nix
@@ -16,11 +16,11 @@
 
 buildPythonPackage rec {
   pname = "oauthenticator";
-  version = "0.7.2";
+  version = "0.7.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0rlg63ii7sxj1xad2nx6wk1xgv3a8dm0az0q9g2v6hdv9cnc4b55";
+    sha256 = "cb0b2564e46db28350693bc3e6457333c4ee21af5066ac743730e3f3173ea7ed";
   };
 
   checkPhase = ''
diff --git a/pkgs/development/python-modules/olefile/default.nix b/pkgs/development/python-modules/olefile/default.nix
index 5cf51b841329..23b470ed90ff 100644
--- a/pkgs/development/python-modules/olefile/default.nix
+++ b/pkgs/development/python-modules/olefile/default.nix
@@ -1,13 +1,13 @@
 { stdenv, buildPythonPackage, fetchPypi }:
 buildPythonPackage rec {
   pname = "olefile";
-  version = "0.44";
+  version = "0.45.1";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "1bbk1xplmrhymqpk6rkb15sg7v9qfih7zh23p6g2fxxas06cmwk1";
+    sha256 = "2b6575f5290de8ab1086f8c5490591f7e0885af682c7c1793bdaf6e64078d385";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/python-modules/openpyxl/default.nix b/pkgs/development/python-modules/openpyxl/default.nix
index 9a94848000ce..fe13b575afc1 100644
--- a/pkgs/development/python-modules/openpyxl/default.nix
+++ b/pkgs/development/python-modules/openpyxl/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "openpyxl";
-  version = "2.4.9";
+  version = "2.5.0";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "95e007f4d121f4fd73f39a6d74a883c75e9fa9d96de91d43c1641c103c3a9b18";
+    sha256 = "0ff2e0c2c85cbf42e82dd223e7f2401a62dc73c18cd9e5dd7763dc6c8014ebde";
   };
 
   checkInputs = [ pytest ];
diff --git a/pkgs/development/python-modules/ovh/default.nix b/pkgs/development/python-modules/ovh/default.nix
new file mode 100644
index 000000000000..3f37940ed8ae
--- /dev/null
+++ b/pkgs/development/python-modules/ovh/default.nix
@@ -0,0 +1,27 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, requests
+, nose
+, mock
+}:
+
+buildPythonPackage rec {
+  pname = "ovh";
+  version = "0.4.8";
+
+  # Needs yanc
+  doCheck = false;
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "79fa4bdc61b9953af867676a9558d9e792b9fde568c980efe848a40565a217cd";
+  };
+
+  meta = {
+    description = "Thin wrapper around OVH's APIs";
+    homepage = http://api.ovh.com/;
+    license = lib.licenses.bsd2;
+    maintainers = [ lib.maintainers.makefu ];
+  };
+}
\ No newline at end of file
diff --git a/pkgs/development/python-modules/packaging/default.nix b/pkgs/development/python-modules/packaging/default.nix
index 4ba93bb57f20..f335bfa135f9 100644
--- a/pkgs/development/python-modules/packaging/default.nix
+++ b/pkgs/development/python-modules/packaging/default.nix
@@ -4,7 +4,6 @@
 buildPythonPackage rec {
   pname = "packaging";
   version = "16.8";
-  name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
@@ -13,7 +12,11 @@ buildPythonPackage rec {
 
   propagatedBuildInputs = [ pyparsing six ];
 
-  buildInputs = [ pytest pretend ];
+  checkInputs = [ pytest pretend ];
+
+  checkPhase = ''
+    py.test tests
+  '';
 
   meta = with stdenv.lib; {
     description = "Core utilities for Python packages";
diff --git a/pkgs/development/python-modules/packet-python/default.nix b/pkgs/development/python-modules/packet-python/default.nix
new file mode 100644
index 000000000000..5811d510dff9
--- /dev/null
+++ b/pkgs/development/python-modules/packet-python/default.nix
@@ -0,0 +1,38 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, requests
+, python
+, fetchpatch
+}:
+
+buildPythonPackage rec {
+  pname = "packet-python";
+  version = "1.37.1";
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "316941d2473c0f42ac17ac89e9aa63a023bb96f35cf8eafe9e091ea424892778";
+  };
+  propagatedBuildInputs = [ requests ];
+
+  checkPhase = ''
+    ${python.interpreter} -m unittest discover -s test
+  '';
+
+  patches = [
+    (fetchpatch {
+      url = https://github.com/packethost/packet-python/commit/361ad0c60d0bfce2a992eefd17e917f9dcf36400.patch;
+      sha256 = "1cmzyq0302y4cqmim6arnvn8n620qysq458g2w5aq4zj1vz1q9g1";
+    })
+  ];
+
+  # Not all test files are included in archive
+  doCheck = false;
+
+  meta = {
+    description = "A Python client for the Packet API.";
+    homepage    = "https://github.com/packethost/packet-python";
+    license     = lib.licenses.lgpl3;
+    maintainers = with lib.maintainers; [ dipinhora ];
+  };
+}
\ No newline at end of file
diff --git a/pkgs/development/python-modules/pafy/default.nix b/pkgs/development/python-modules/pafy/default.nix
index 77ed1d6c4c0a..a1b5c77b2d10 100644
--- a/pkgs/development/python-modules/pafy/default.nix
+++ b/pkgs/development/python-modules/pafy/default.nix
@@ -2,11 +2,11 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "pafy";
-  version = "0.5.3.1";
+  version = "0.5.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1a7dxi95m1043rxx1r5x3ngb66nwlq6aqcasyqqjzmmmjps4zrim";
+    sha256 = "e842dc589a339a870b5869cc3802f2e95824edf347f65128223cd5ebdff21024";
   };
 
   # No tests included in archive
diff --git a/pkgs/development/python-modules/papis-python-rofi/default.nix b/pkgs/development/python-modules/papis-python-rofi/default.nix
new file mode 100644
index 000000000000..1344e1588cd5
--- /dev/null
+++ b/pkgs/development/python-modules/papis-python-rofi/default.nix
@@ -0,0 +1,21 @@
+{ buildPythonPackage, lib, fetchPypi }:
+
+buildPythonPackage rec {
+  pname = "papis-python-rofi";
+  version = "1.0.2";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "13k6mw2nq923zazs77hpmh2s96v6zv13g7p89510qqkvp6fiml1v";
+  };
+
+  # No tests existing
+  doCheck = false;
+
+  meta = {
+    description = "A Python module to make simple GUIs with Rofi";
+    homepage = https://github.com/alejandrogallo/python-rofi;
+    license = lib.licenses.mit;
+    maintainers = [ lib.maintainers.nico202 ];
+  };
+}
diff --git a/pkgs/development/python-modules/nose-parameterized/default.nix b/pkgs/development/python-modules/parameterized/default.nix
index 3c7cd077cdc0..14b41fe950bb 100644
--- a/pkgs/development/python-modules/nose-parameterized/default.nix
+++ b/pkgs/development/python-modules/parameterized/default.nix
@@ -1,18 +1,18 @@
 { stdenv, fetchPypi, buildPythonPackage, nose, six, glibcLocales, isPy3k }:
 
 buildPythonPackage rec {
-  pname = "nose-parameterized";
-  version = "0.6.0";
+  pname = "parameterized";
+  version = "0.6.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1khlabgib4161vn6alxsjaa8javriywgx9vydddi659gp9x6fpnk";
+    sha256 = "1qj1939shm48d9ql6fm1nrdy4p7sdyj8clz1szh5swwpf1qqxxfa";
   };
 
   # Tests require some python3-isms but code works without.
   doCheck = isPy3k;
 
-  buildInputs = [ nose glibcLocales ];
+  checkInputs = [ nose glibcLocales ];
   propagatedBuildInputs = [ six ];
 
   checkPhase = ''
@@ -21,7 +21,8 @@ buildPythonPackage rec {
 
   meta = with stdenv.lib; {
     description = "Parameterized testing with any Python test framework";
-    homepage = https://pypi.python.org/pypi/nose-parameterized;
+    homepage = https://pypi.python.org/pypi/parameterized;
     license = licenses.bsd3;
+    maintainers = with maintainers; [ ma27 ];
   };
 }
diff --git a/pkgs/development/python-modules/path.py/default.nix b/pkgs/development/python-modules/path.py/default.nix
index 2830477d3cf1..53754fd3dc29 100644
--- a/pkgs/development/python-modules/path.py/default.nix
+++ b/pkgs/development/python-modules/path.py/default.nix
@@ -5,20 +5,21 @@
 , pytestrunner
 , pytest
 , glibcLocales
+, packaging
 }:
 
 buildPythonPackage rec {
   pname = "path.py";
-  version = "10.5";
+  version = "11.0";
   name = pname + "-" + version;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "63a7af08676668fd51750f111affbd38c1a13c61aba15c6665b16681771c79a8";
+    sha256 = "16134e5b287aba4a4125a6722e7837cf2a149fccc5000c500ae6c71a5525488b";
   };
 
-  checkInputs = [ pytest pytestrunner ];
-  buildInputs = [setuptools_scm glibcLocales ];
+  checkInputs = [ pytest pytestrunner glibcLocales packaging ];
+  buildInputs = [ setuptools_scm ];
 
   LC_ALL="en_US.UTF-8";
 
diff --git a/pkgs/development/python-modules/pecan/default.nix b/pkgs/development/python-modules/pecan/default.nix
index b6e022640cbd..3a49a32a8a0e 100644
--- a/pkgs/development/python-modules/pecan/default.nix
+++ b/pkgs/development/python-modules/pecan/default.nix
@@ -15,17 +15,12 @@
 }:
 
 buildPythonPackage rec {
-  name = "${pname}-${version}";
   pname = "pecan";
-  version = "1.2.1";
-
-  patches = [
-    ./python36_test_fix.patch
-  ];
+  version = "1.3.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0ikc32rd2hr8j2jxc0mllvdjvxydx3fwfp3z8sdxmkzdkixlb5cd";
+    sha256 = "24f06cf88a488b75f433e62b33c1c97e4575d0cd91eec9eec841a81cecfd6de3";
   };
 
   propagatedBuildInputs = [ singledispatch logutils ];
diff --git a/pkgs/development/python-modules/pecan/python36_test_fix.patch b/pkgs/development/python-modules/pecan/python36_test_fix.patch
deleted file mode 100644
index 65e0733ab06e..000000000000
--- a/pkgs/development/python-modules/pecan/python36_test_fix.patch
+++ /dev/null
@@ -1,13 +0,0 @@
-diff --git a/pecan/tests/test_conf.py b/pecan/tests/test_conf.py
-index 0573d84..7c98e16 100644
---- a/pecan/tests/test_conf.py
-+++ b/pecan/tests/test_conf.py
-@@ -157,7 +157,7 @@ class TestConf(PecanTestCase):
-
-             try:
-                 configuration.conf_from_file(f.name)
--            except (ValueError, SystemError) as e:
-+            except (ValueError, SystemError, ImportError) as e:
-                 assert 'relative import' in str(e)
-             else:
-                 raise AssertionError(
diff --git a/pkgs/development/python-modules/pendulum/default.nix b/pkgs/development/python-modules/pendulum/default.nix
index e75a264de3db..12d5c82d511a 100644
--- a/pkgs/development/python-modules/pendulum/default.nix
+++ b/pkgs/development/python-modules/pendulum/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "pendulum";
-  version = "1.3.2";
+  version = "1.4.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1j6hdsdhhw4d6fy9byr0vyxqnb53ap8bh2a0cibl7p0ks0zvb14j";
+    sha256 = "3f16fb759e6126dd89d49886f8100caa72e5ab36563bc148b4f7eddfa0099c0f";
   };
 
   propagatedBuildInputs = [ dateutil pytzdata tzlocal ];
diff --git a/pkgs/development/python-modules/pexpect/default.nix b/pkgs/development/python-modules/pexpect/default.nix
index da8d5db359b0..b064b9037e90 100644
--- a/pkgs/development/python-modules/pexpect/default.nix
+++ b/pkgs/development/python-modules/pexpect/default.nix
@@ -6,12 +6,12 @@
 
 buildPythonPackage rec {
   pname = "pexpect";
-  version = "4.3.1";
+  version = "4.4.0";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "8e287b171dbaf249d0b06b5f2e88cb7e694651d2d0b8c15bccb83170d3c55575";
+    sha256 = "67b85a1565968e3d5b5e7c9283caddc90c3947a2625bed1905be27bd5a03e47d";
   };
 
   # Wants to run pythonin a subprocess
diff --git a/pkgs/development/python-modules/platformio/default.nix b/pkgs/development/python-modules/platformio/default.nix
index 6ac9b7eacfcf..01d47b458606 100644
--- a/pkgs/development/python-modules/platformio/default.nix
+++ b/pkgs/development/python-modules/platformio/default.nix
@@ -3,6 +3,7 @@
 , lockfile, pyserial, requests
 , semantic-version
 , isPy3k, isPyPy
+, git
 }:
 buildPythonPackage rec {
   disabled = isPy3k || isPyPy;
@@ -17,7 +18,7 @@ buildPythonPackage rec {
   };
 
   propagatedBuildInputs =  [
-    bottle click_5 colorama lockfile
+    bottle click_5 colorama git lockfile
     pyserial requests semantic-version
   ];
 
diff --git a/pkgs/development/python-modules/plone-testing/default.nix b/pkgs/development/python-modules/plone-testing/default.nix
index 910fc034e365..6f18a74f0738 100644
--- a/pkgs/development/python-modules/plone-testing/default.nix
+++ b/pkgs/development/python-modules/plone-testing/default.nix
@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "plone.testing";
-  version = "5.1.1";
+  version = "6.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "2ca558a910b93355b760535b233518be3a06c58e46160487bf802b6f7cb1e511";
+    sha256 = "8aa7c45237b883ea1d1c28fb465322f69310b084b9f9b6a79af64401b649dc4c";
   };
 
   propagatedBuildInputs = [ setuptools zope_testing ];
diff --git a/pkgs/development/python-modules/plotly/default.nix b/pkgs/development/python-modules/plotly/default.nix
index 75f1b0600778..a202ef8b85a5 100644
--- a/pkgs/development/python-modules/plotly/default.nix
+++ b/pkgs/development/python-modules/plotly/default.nix
@@ -10,12 +10,12 @@
 
 buildPythonPackage rec {
   pname = "plotly";
-  version = "2.2.3";
+  version = "2.4.0";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "dadd2263f1c0449b248fd3742a077d9594935921a9597529be76d6a841237ab0";
+    sha256 = "8e7ee039231fec52b0b38d45e7470f70b117f6527b08cc922d74992f4d082858";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/plumbum/default.nix b/pkgs/development/python-modules/plumbum/default.nix
index a5881bb2e7cf..cd4a79104eb8 100644
--- a/pkgs/development/python-modules/plumbum/default.nix
+++ b/pkgs/development/python-modules/plumbum/default.nix
@@ -6,7 +6,7 @@
 
 buildPythonPackage rec {
   pname = "plumbum";
-  version = "1.6.5";
+  version = "1.6.6";
   name = "${pname}-${version}";
 
   checkInputs = [ pytest ];
@@ -16,6 +16,6 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d8abb059bb62beb6c99db08d3598167abaeeab53eaf218f91e74bae471a24bee";
+    sha256 = "d179b90a9927f91427a28c1bac2864c61342cb43ef39aa7324c7c9a96bcc23eb";
   };
 }
\ No newline at end of file
diff --git a/pkgs/development/python-modules/prov/default.nix b/pkgs/development/python-modules/prov/default.nix
index 9dac8677c33b..8866382ea8f2 100644
--- a/pkgs/development/python-modules/prov/default.nix
+++ b/pkgs/development/python-modules/prov/default.nix
@@ -11,11 +11,11 @@
 
 buildPythonPackage rec {
   pname = "prov";
-  version = "1.5.1";
+  version = "1.5.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "7a2d72b0df43cd9c6e374d815c8ce3cd5ca371d54f98f837853ac9fcc98aee4c";
+    sha256 = "640dc158d931403bc6c1a0ad80702caae71f810bac21f90ec605865c8444b7bb";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pyGithub/default.nix b/pkgs/development/python-modules/pyGithub/default.nix
index ec8db1c5bc3d..6adc1e7ec04c 100644
--- a/pkgs/development/python-modules/pyGithub/default.nix
+++ b/pkgs/development/python-modules/pyGithub/default.nix
@@ -1,24 +1,24 @@
 { stdenv, fetchFromGitHub
 , cacert
-, buildPythonPackage, python-jose }:
+, buildPythonPackage, python-jose, pyjwt }:
 
 buildPythonPackage rec {
   pname = "PyGithub";
-  version = "1.32";
+  version = "1.36";
   name = pname + "-" + version;
 
   src = fetchFromGitHub {
     owner = "PyGithub";
     repo = "PyGithub";
     rev = "v${version}";
-    sha256 = "15dr9ja63zdxax9lg6q2kcakqa82dpffyhgpjr13wq3sfkcy5pdw";
+    sha256 = "0yb74f9hg2vdsy766m850hfb1ss17lbgcdvvklm4qf72w12nxc5w";
   };
 
   postPatch = ''
     # requires network
     echo "" > github/tests/Issue142.py
   '';
-  propagatedBuildInputs = [ python-jose ];
+  propagatedBuildInputs = [ python-jose pyjwt ];
   meta = with stdenv.lib; {
     homepage = https://github.com/PyGithub/PyGithub;
     description = "A Python (2 and 3) library to access the GitHub API v3";
diff --git a/pkgs/development/python-modules/py_scrypt/default.nix b/pkgs/development/python-modules/py_scrypt/default.nix
index bf6300b84119..1b1f758d9413 100644
--- a/pkgs/development/python-modules/py_scrypt/default.nix
+++ b/pkgs/development/python-modules/py_scrypt/default.nix
@@ -6,12 +6,12 @@
 
 buildPythonPackage rec {
   pname = "scrypt";
-  version = "0.8.0";
+  version = "0.8.6";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0830r3q8f8mc4738ngcvwhv9kih5c6zf87mzkdifzf2h6kss99fl";
+    sha256 = "f8239b2d47fa1d40bc27efd231dc7083695d10c1c2ac51a99380360741e0362d";
   };
 
   buildInputs = [ openssl ];
diff --git a/pkgs/development/python-modules/pybase64/default.nix b/pkgs/development/python-modules/pybase64/default.nix
new file mode 100644
index 000000000000..c81d60ced4df
--- /dev/null
+++ b/pkgs/development/python-modules/pybase64/default.nix
@@ -0,0 +1,25 @@
+{ buildPythonPackage, stdenv, fetchPypi, parameterized, six, nose }:
+
+buildPythonPackage rec {
+  pname = "pybase64";
+  version = "0.2.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "1hggg69s5r8jyqdwyzri5sn3f19p7ayl0fjhjma0qzgfp7bk6zjc";
+  };
+
+  propagatedBuildInputs = [ six ];
+  checkInputs = [ parameterized nose ];
+
+  checkPhase = ''
+    nosetests
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = https://pypi.python.org/pypi/pybase64;
+    description = "Fast Base64 encoding/decoding";
+    license = licenses.bsd2;
+    maintainers = with maintainers; [ ma27 ];
+  };
+}
diff --git a/pkgs/development/python-modules/pycryptodome/default.nix b/pkgs/development/python-modules/pycryptodome/default.nix
index 9751eaf7ce79..a086658cd7b7 100644
--- a/pkgs/development/python-modules/pycryptodome/default.nix
+++ b/pkgs/development/python-modules/pycryptodome/default.nix
@@ -1,13 +1,13 @@
 { stdenv, fetchurl, python, buildPythonPackage, gmp }:
 
 buildPythonPackage rec {
-  version = "3.4.7";
+  version = "3.4.9";
   pname = "pycryptodome";
   name = "${pname}-${version}";
 
   src = fetchurl {
     url = "mirror://pypi/p/pycryptodome/${name}.tar.gz";
-    sha256 = "18d8dfe31bf0cb53d58694903e526be68f3cf48e6e3c6dfbbc1e7042b1693af7";
+    sha256 = "00cc7767c7bbe91f15a65a1b2ebe7a08002b8ae8221c1dcecc5c5c9ab6f79753";
   };
 
   meta = {
diff --git a/pkgs/development/python-modules/pycryptodomex/default.nix b/pkgs/development/python-modules/pycryptodomex/default.nix
index 35a7213306f9..8cc22c986e25 100644
--- a/pkgs/development/python-modules/pycryptodomex/default.nix
+++ b/pkgs/development/python-modules/pycryptodomex/default.nix
@@ -3,7 +3,7 @@
 buildPythonPackage rec {
   pname = "pycryptodomex";
   name = "${pname}-${version}";
-  version = "3.4.7";
+  version = "3.4.9";
 
   meta = {
     description = "A self-contained cryptographic library for Python";
@@ -13,6 +13,6 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "52aa2e540d06d63636e4b5356957c520611e28a88386bad4d18980e4b00e0b5a";
+    sha256 = "d078b67be76ccafa8b7cc391e87151b80b0ef9bfbeee8a95d286e522cc7537f7";
   };
 }
diff --git a/pkgs/development/python-modules/pyemd/default.nix b/pkgs/development/python-modules/pyemd/default.nix
index 1004d70476c9..a7430c94b480 100644
--- a/pkgs/development/python-modules/pyemd/default.nix
+++ b/pkgs/development/python-modules/pyemd/default.nix
@@ -3,11 +3,11 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "pyemd";
-  version = "0.4.4";
+  version = "0.5.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "13y06y7r1697cv4r430g45fxs40i2yk9xn0dk9nqlrpddw3a0mr4";
+    sha256 = "fc81c2116f8573e559dfbb8d73e03d9f73c22d0770559f406516984302e07e70";
   };
 
   propagatedBuildInputs = [ numpy ];
diff --git a/pkgs/development/python-modules/pyglet/default.nix b/pkgs/development/python-modules/pyglet/default.nix
index 51243154b1a2..8ac066500a4c 100644
--- a/pkgs/development/python-modules/pyglet/default.nix
+++ b/pkgs/development/python-modules/pyglet/default.nix
@@ -2,12 +2,12 @@
 , mesa, xorg, freetype, fontconfig, future}:
 
 buildPythonPackage rec {
-  version = "1.3.0";
+  version = "1.3.1";
   pname = "pyglet";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "640a8f8e3d7bf8dbb551fa707f14021f619932990ab1401c48ba9dbcc6c2242c";
+    sha256 = "0a73280fa3949ea4890fee28f625c10b1e10a7cda390a08b6bce4740948167cd";
   };
 
   postPatch = let
diff --git a/pkgs/development/python-modules/pyhomematic/default.nix b/pkgs/development/python-modules/pyhomematic/default.nix
index 094274cefec6..1191b09ec389 100644
--- a/pkgs/development/python-modules/pyhomematic/default.nix
+++ b/pkgs/development/python-modules/pyhomematic/default.nix
@@ -1,19 +1,19 @@
-{ stdenv, buildPythonPackage, isPy3k, fetchPypi }:
+{ stdenv, buildPythonPackage, isPy3k, fetchFromGitHub }:
 
 buildPythonPackage rec {
   pname = "pyhomematic";
-  version = "0.1.38";
+  version = "0.1.39";
 
   disabled = !isPy3k;
 
-  src = fetchPypi {
-    inherit pname version;
-    sha256 = "15b09ppn5sn3vpnwfb7gygrvn5v65k3zvahkfx2kqpk1xah0mqbf";
+  # PyPI tarball does not include tests/ directory
+  src = fetchFromGitHub {
+    owner = "danielperna84";
+    repo = pname;
+    rev = version;
+    sha256 = "1g181x2mrhxcaswr6vi2m7if97wv4rf2g2pny60334sciga8njfz";
   };
 
-  # Tests reuire network access
-  doCheck = false;
-
   meta = with stdenv.lib; {
     description = "Python 3 Interface to interact with Homematic devices";
     homepage = https://github.com/danielperna84/pyhomematic;
diff --git a/pkgs/development/python-modules/pylibgen/default.nix b/pkgs/development/python-modules/pylibgen/default.nix
new file mode 100644
index 000000000000..8db864cc869d
--- /dev/null
+++ b/pkgs/development/python-modules/pylibgen/default.nix
@@ -0,0 +1,28 @@
+{ buildPythonPackage, python, lib, fetchPypi
+, isPy3k
+, requests
+}:
+
+buildPythonPackage rec {
+  pname = "pylibgen";
+  version = "1.3.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "1rviqi3rf62b43cabdy8c2cdznjv034mp0qrfrzvkih4jlkhyfrh";
+  };
+
+  disabled = !isPy3k;
+
+  propagatedBuildInputs = [ requests ];
+
+  # It's not using unittest
+  checkPhase = "${python.interpreter} tests/test_pylibgen.py -c 'test_api_endpoints()'";
+
+  meta = {
+    description = "Python interface to Library Genesis";
+    homepage = https://pypi.org/project/pylibgen/;
+    license = lib.licenses.mit;
+    maintainers = [ lib.maintainers.nico202 ];
+  };
+}
diff --git a/pkgs/development/python-modules/pylint/default.nix b/pkgs/development/python-modules/pylint/default.nix
index 79337663c627..194d91341d8a 100644
--- a/pkgs/development/python-modules/pylint/default.nix
+++ b/pkgs/development/python-modules/pylint/default.nix
@@ -4,11 +4,11 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "pylint";
-  version = "1.8.1";
+  version = "1.8.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "3035e44e37cd09919e9edad5573af01d7c6b9c52a0ebb4781185ae7ab690458b";
+    sha256 = "4fe3b99da7e789545327b75548cee6b511e4faa98afe268130fea1af4b5ec022";
   };
 
   buildInputs = [ pytest pytestrunner mccabe configparser backports_functools_lru_cache ];
diff --git a/pkgs/development/python-modules/pymacaroons-pynacl/default.nix b/pkgs/development/python-modules/pymacaroons-pynacl/default.nix
new file mode 100644
index 000000000000..8bc644252c0f
--- /dev/null
+++ b/pkgs/development/python-modules/pymacaroons-pynacl/default.nix
@@ -0,0 +1,24 @@
+{ lib, buildPythonPackage, fetchFromGitHub, pynacl, six }:
+
+buildPythonPackage rec {
+  pname = "pymacaroons-pynacl";
+  version = "0.9.3";
+
+  src = fetchFromGitHub {
+    owner = "matrix-org";
+    repo = "pymacaroons";
+    rev = "v${version}";
+    sha256 = "0bykjk01zdndp6gjr30x46blsn0cvxa7j0zh5g8raxwaawchjhii";
+  };
+
+  propagatedBuildInputs = [ pynacl six ];
+
+  # Tests require an old version of hypothesis
+  doCheck = false;
+
+  meta = with lib; {
+    description = "Macaroon library for Python";
+    homepage = https://github.com/matrix-org/pymacaroons;
+    license = licenses.mit;
+  };
+}
diff --git a/pkgs/development/python-modules/pynacl/default.nix b/pkgs/development/python-modules/pynacl/default.nix
new file mode 100644
index 000000000000..bceb2b50cc59
--- /dev/null
+++ b/pkgs/development/python-modules/pynacl/default.nix
@@ -0,0 +1,32 @@
+{ stdenv, buildPythonPackage, fetchFromGitHub, pytest, coverage, libsodium, cffi, six, hypothesis}:
+
+buildPythonPackage rec {
+  pname = "pynacl";
+  version = "1.2.1";
+
+  src = fetchFromGitHub {
+    owner = "pyca";
+    repo = pname;
+    rev = version;
+    sha256 = "0z9i1z4hjzmp23igyhvg131gikbrr947506lwfb3fayf0agwfv8f";
+  };
+
+  # set timeout to unlimited, remove deadline from tests, see https://github.com/pyca/pynacl/issues/370
+  patches = [ ./pynacl-no-timeout-and-deadline.patch ];
+
+  checkInputs = [ pytest hypothesis ];
+  propagatedBuildInputs = [ libsodium cffi six ];
+
+  SODIUM_INSTALL = "system";
+
+  checkPhase = ''
+    py.test
+  '';
+  
+  meta = with stdenv.lib; {
+    maintainers = with maintainers; [ va1entin ];
+    description = "Python binding to the Networking and Cryptography (NaCl) library";
+    homepage = https://github.com/pyca/pynacl/;
+    license = licenses.asl20;
+  };
+}
diff --git a/pkgs/development/python-modules/pynacl/pynacl-no-timeout-and-deadline.patch b/pkgs/development/python-modules/pynacl/pynacl-no-timeout-and-deadline.patch
new file mode 100644
index 000000000000..5f831df3c48d
--- /dev/null
+++ b/pkgs/development/python-modules/pynacl/pynacl-no-timeout-and-deadline.patch
@@ -0,0 +1,49 @@
+diff --git a/tests/test_pwhash.py b/tests/test_pwhash.py
+index 9634c85..7f20316 100644
+--- a/tests/test_pwhash.py
++++ b/tests/test_pwhash.py
+@@ -20,7 +20,7 @@ import os
+ import sys
+ import unicodedata as ud
+ 
+-from hypothesis import given, settings
++from hypothesis import given, settings, unlimited
+ from hypothesis.strategies import integers, text
+ 
+ import pytest
+@@ -411,7 +411,7 @@ def test_str_verify_argon2_ref_fail(password_hash, password):
+        integers(min_value=1024 * 1024,
+                 max_value=16 * 1024 * 1024)
+        )
+-@settings(deadline=1500, max_examples=20)
++@settings(timeout=unlimited, deadline=None, max_examples=20)
+ def test_argon2i_str_and_verify(password, ops, mem):
+     _psw = password.encode('utf-8')
+     pw_hash = nacl.pwhash.argon2i.str(_psw, opslimit=ops, memlimit=mem)
+@@ -425,7 +425,7 @@ def test_argon2i_str_and_verify(password, ops, mem):
+        integers(min_value=1024 * 1024,
+                 max_value=16 * 1024 * 1024)
+        )
+-@settings(deadline=1500, max_examples=20)
++@settings(timeout=unlimited, deadline=None, max_examples=20)
+ def test_argon2id_str_and_verify(password, ops, mem):
+     _psw = password.encode('utf-8')
+     pw_hash = nacl.pwhash.argon2id.str(_psw, opslimit=ops, memlimit=mem)
+@@ -439,7 +439,7 @@ def test_argon2id_str_and_verify(password, ops, mem):
+        integers(min_value=1024 * 1024,
+                 max_value=16 * 1024 * 1024)
+        )
+-@settings(deadline=1500, max_examples=20)
++@settings(timeout=unlimited, deadline=None, max_examples=20)
+ def test_argon2i_str_and_verify_fail(password, ops, mem):
+     _psw = password.encode('utf-8')
+     pw_hash = nacl.pwhash.argon2i.str(_psw, opslimit=ops, memlimit=mem)
+@@ -448,7 +448,7 @@ def test_argon2i_str_and_verify_fail(password, ops, mem):
+ 
+ 
+ @given(text(alphabet=PASSWD_CHARS, min_size=5, max_size=20))
+-@settings(deadline=1500, max_examples=5)
++@settings(timeout=unlimited, deadline=None, max_examples=5)
+ def test_pwhash_str_and_verify(password):
+     _psw = password.encode('utf-8')
+ 
diff --git a/pkgs/development/python-modules/pyopenssl/default.nix b/pkgs/development/python-modules/pyopenssl/default.nix
new file mode 100644
index 000000000000..f3054e3e4dd4
--- /dev/null
+++ b/pkgs/development/python-modules/pyopenssl/default.nix
@@ -0,0 +1,46 @@
+{ stdenv
+, buildPythonPackage
+, fetchPypi
+, openssl
+, cryptography
+, pyasn1
+, idna
+, pytest
+, pretend
+, flaky
+, glibcLocales
+}:
+
+buildPythonPackage rec {
+  pname = "pyOpenSSL";
+  version = "17.5.0";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "2c10cfba46a52c0b0950118981d61e72c1e5b1aac451ca1bc77de1a679456773";
+  };
+
+  outputs = [ "out" "dev" ];
+
+  preCheck = ''
+    sed -i 's/test_set_default_verify_paths/noop/' tests/test_ssl.py
+    # https://github.com/pyca/pyopenssl/issues/692
+    sed -i 's/test_fallback_default_verify_paths/noop/' tests/test_ssl.py
+  '';
+
+  checkPhase = ''
+    runHook preCheck
+    export LANG="en_US.UTF-8"
+    py.test
+    runHook postCheck
+  '';
+
+  # Seems to fail unpredictably on Darwin. See http://hydra.nixos.org/build/49877419/nixlog/1
+  # for one example, but I've also seen ContextTests.test_set_verify_callback_exception fail.
+  doCheck = !stdenv.isDarwin;
+
+  buildInputs = [ openssl ];
+  propagatedBuildInputs = [ cryptography pyasn1 idna ];
+
+  checkInputs = [ pytest pretend flaky glibcLocales ];
+}
\ No newline at end of file
diff --git a/pkgs/development/python-modules/pypandoc/default.nix b/pkgs/development/python-modules/pypandoc/default.nix
index ba05da884d8b..3af86dabe215 100644
--- a/pkgs/development/python-modules/pypandoc/default.nix
+++ b/pkgs/development/python-modules/pypandoc/default.nix
@@ -4,7 +4,6 @@
 buildPythonPackage rec {
   pname = "pypandoc";
   version = "1.4";
-  name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
@@ -28,5 +27,7 @@ buildPythonPackage rec {
     homepage = https://github.com/bebraw/pypandoc;
     license = licenses.mit;
     maintainers = with maintainers; [ bennofs ];
+
+    broken = true; # incompatible with pandoc v2
   };
 }
diff --git a/pkgs/development/python-modules/pyparser/default.nix b/pkgs/development/python-modules/pyparser/default.nix
new file mode 100644
index 000000000000..1c00d726eadc
--- /dev/null
+++ b/pkgs/development/python-modules/pyparser/default.nix
@@ -0,0 +1,27 @@
+{ buildPythonPackage, lib, fetchFromBitbucket
+, parse
+}:
+
+buildPythonPackage rec {
+  pname = "pyparser";
+  version = "1.0";
+
+  # Missing tests on Pypi
+  src = fetchFromBitbucket {
+    owner = "rw_grim";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "0aplb4zdpgbpmaw9qj0vr7qip9q5w7sl1m1lp1nc9jmjfij9i0hf";
+  };
+
+  postPatch = "sed -i 's/parse==/parse>=/' requirements.txt";
+
+  propagatedBuildInputs = [ parse ];
+
+  meta = {
+    description = "Simple library that makes it easier to parse files";
+    homepage = https://bitbucket.org/rw_grim/pyparser;
+    license = lib.licenses.gpl3;
+    maintainers = [ lib.maintainers.nico202 ];
+  };
+}
diff --git a/pkgs/development/python-modules/pyqt/5.x.nix b/pkgs/development/python-modules/pyqt/5.x.nix
index 053824ef8e95..225da204e21a 100644
--- a/pkgs/development/python-modules/pyqt/5.x.nix
+++ b/pkgs/development/python-modules/pyqt/5.x.nix
@@ -6,14 +6,13 @@
 
 let
   pname = "PyQt";
-  version = "5.9.2";
+  version = "5.10";
 
   inherit (pythonPackages) buildPythonPackage python dbus-python sip;
 in buildPythonPackage {
   pname = pname;
   version = version;
   format = "other";
-  name = pname + "-" + version;
 
   meta = with lib; {
     description = "Python bindings for Qt5";
@@ -25,10 +24,10 @@ in buildPythonPackage {
 
   src = fetchurl {
     url = "mirror://sourceforge/pyqt/PyQt5/PyQt-${version}/PyQt5_gpl-${version}.tar.gz";
-    sha256 = "15439gxari6azbfql20ksz8h4gv23k3kfyjyr89h2yy9k32xm461";
+    sha256 = "0l2zy6b7bfjxmg4bb8yikg6i8iy2xdwmvk7knfmrzfpqbmkycbrl";
   };
 
-  nativeBuildInputs = [ pkgconfig makeWrapper qmake ];
+  nativeBuildInputs = [ pkgconfig qmake ];
 
   buildInputs = [
     lndir qtbase qtsvg qtwebkit qtwebengine dbus_libs
@@ -43,10 +42,10 @@ in buildPythonPackage {
     lndir ${dbus-python} $out
     rm -rf "$out/nix-support"
 
-    export PYTHONPATH=$PYTHONPATH:$out/lib/${python.libPrefix}/site-packages
+    export PYTHONPATH=$PYTHONPATH:$out/${python.sitePackages}
 
     substituteInPlace configure.py \
-      --replace 'install_dir=pydbusmoddir' "install_dir='$out/lib/${python.libPrefix}/site-packages/dbus/mainloop'" \
+      --replace 'install_dir=pydbusmoddir' "install_dir='$out/${python.sitePackages}/dbus/mainloop'" \
       --replace "ModuleMetadata(qmake_QT=['webkitwidgets'])" "ModuleMetadata(qmake_QT=['webkitwidgets', 'printsupport'])"
 
     ${python.executable} configure.py  -w \
diff --git a/pkgs/development/python-modules/pyrtlsdr/default.nix b/pkgs/development/python-modules/pyrtlsdr/default.nix
index 0d50686f8924..a86badb3bca8 100644
--- a/pkgs/development/python-modules/pyrtlsdr/default.nix
+++ b/pkgs/development/python-modules/pyrtlsdr/default.nix
@@ -1,22 +1,34 @@
 { lib
 , buildPythonPackage
 , fetchPypi
+, fetchpatch
 , rtl-sdr
-, pypandoc
-, pandoc
+, m2r
 }:
 
 buildPythonPackage rec {
   pname = "pyrtlsdr";
   version = "0.2.7";
-  name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
     sha256 = "7942fe2e7821d09206002ea7e820e694094b3f964885123eb6eee1167f39b8da";
   };
 
-  buildInputs = [ pypandoc pandoc ];
+  # Replace pypandoc dependency by m2r
+  # See https://github.com/roger-/pyrtlsdr/pull/78
+  patches = [
+    (fetchpatch {
+      url = "${meta.homepage}/commit/2b7df0b.patch";
+      sha256 = "04h5z80969jgdgrf98b9ps56sybms09xacvmj6rwcfrmanli8rgf";
+    })
+    (fetchpatch {
+      url = "${meta.homepage}/commit/97dc3d0.patch";
+      sha256 = "1v1j0n91jwpsiam2j34yj71z4h39cvk4gi4565zgjrzsq6xr93i0";
+    })
+  ];
+
+  nativeBuildInputs = [ m2r ];
 
   postPatch = ''
     sed "s|driver_files =.*|driver_files = ['${rtl-sdr}/lib/librtlsdr.so']|" -i rtlsdr/librtlsdr.py
@@ -31,5 +43,5 @@ buildPythonPackage rec {
     license = licenses.gpl3;
     platforms = platforms.linux;
     maintainers = with maintainers; [ bjornfor ];
- };
+  };
 }
diff --git a/pkgs/development/python-modules/pysam/default.nix b/pkgs/development/python-modules/pysam/default.nix
new file mode 100644
index 000000000000..9d6cbacc9589
--- /dev/null
+++ b/pkgs/development/python-modules/pysam/default.nix
@@ -0,0 +1,48 @@
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
+, bzip2
+, bcftools
+, curl
+, cython
+, htslib
+, lzma
+, pytest
+, samtools
+, zlib
+}:
+
+buildPythonPackage rec {
+  pname   = "pysam";
+  version = "0.13.0";
+
+  # Fetching from GitHub instead of PyPi cause the 0.13 src release on PyPi is
+  # missing some files which cause test failures.
+  # Tracked at: https://github.com/pysam-developers/pysam/issues/616
+  src = fetchFromGitHub {
+    owner = "pysam-developers";
+    repo = "pysam";
+    rev = "v${version}";
+    sha256 = "1lwbcl38w1x0gciw5psjp87msmv9zzkgiqikg9b83dqaw2y5az1i";
+  };
+
+  buildInputs = [ bzip2 curl cython lzma zlib ];
+
+  checkInputs = [ pytest bcftools htslib samtools ];
+
+  checkPhase = "py.test";
+
+  preInstall = ''
+    export HOME=$(mktemp -d)
+    make -C tests/pysam_data
+    make -C tests/cbcf_data
+  '';
+
+  meta = {
+    homepage = http://pysam.readthedocs.io/;
+    description = "A python module for reading, manipulating and writing genome data sets";
+    maintainers = with lib.maintainers; [ unode ];
+    license = lib.licenses.mit;
+    platforms = [ "i686-linux" "x86_64-linux" ];
+  };
+}
diff --git a/pkgs/development/python-modules/pytest-cram/default.nix b/pkgs/development/python-modules/pytest-cram/default.nix
index fdd2b2316e29..4555479af43e 100644
--- a/pkgs/development/python-modules/pytest-cram/default.nix
+++ b/pkgs/development/python-modules/pytest-cram/default.nix
@@ -1,8 +1,7 @@
 {lib, buildPythonPackage, fetchPypi, pytest, cram, bash, writeText}:
 
 buildPythonPackage rec {
-  name = "${pname}-${version}";
-  version = "0.1.1";
+  version = "0.2.0";
   pname = "pytest-cram";
 
   buildInputs = [ pytest ];
@@ -10,7 +9,8 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0ad05999iqzyjay9y5lc0cnd3jv8qxqlzsvxzp76shslmhrv0c4f";
+    sha256 = "006p5dr3q794sbwwmxmdls3nwq0fvnyrxxmc03pgq8n74chl71qn";
+    extension = "zip";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/pytest-httpbin/default.nix b/pkgs/development/python-modules/pytest-httpbin/default.nix
index caa2c27e3f85..cfa24fdfe528 100644
--- a/pkgs/development/python-modules/pytest-httpbin/default.nix
+++ b/pkgs/development/python-modules/pytest-httpbin/default.nix
@@ -24,6 +24,10 @@ buildPythonPackage rec {
 
   propagatedBuildInputs = [ flask decorator httpbin six requests ];
 
+  checkPhase = ''
+    py.test
+  '';
+
   meta = {
     description = "Easily test your HTTP library against a local copy of httpbin.org";
     homepage = https://github.com/kevin1024/pytest-httpbin;
diff --git a/pkgs/development/python-modules/pytest-mock/default.nix b/pkgs/development/python-modules/pytest-mock/default.nix
new file mode 100644
index 000000000000..51ec2a1f4cbc
--- /dev/null
+++ b/pkgs/development/python-modules/pytest-mock/default.nix
@@ -0,0 +1,25 @@
+{ lib, buildPythonPackage, fetchPypi, isPy3k, pytest, mock, setuptools_scm }:
+
+buildPythonPackage rec {
+  pname = "pytest-mock";
+  version = "1.7.0";
+ 
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "8ed6c9ac6b7565b226b4da2da48876c9198d76401ec8d9c5e4c69b45423e33f8";
+  };
+
+  propagatedBuildInputs = [ pytest ] ++ lib.optional (!isPy3k) mock;
+  nativeBuildInputs = [ setuptools_scm ];
+
+  checkPhase = ''
+    py.test
+  '';
+
+  meta = with lib; {
+    description = "Thin-wrapper around the mock package for easier use with py.test.";
+    homepage    = https://github.com/pytest-dev/pytest-mock;
+    license     = licenses.mit;
+    maintainers = with maintainers; [ nand0p ];
+  };
+}
diff --git a/pkgs/development/python-modules/pytest-sugar/default.nix b/pkgs/development/python-modules/pytest-sugar/default.nix
index 2965d169599a..a266b4617492 100644
--- a/pkgs/development/python-modules/pytest-sugar/default.nix
+++ b/pkgs/development/python-modules/pytest-sugar/default.nix
@@ -1,17 +1,20 @@
 { stdenv, buildPythonPackage, fetchPypi, termcolor, pytest }:
 
 buildPythonPackage rec {
-  name = "${pname}-${version}";
   pname = "pytest-sugar";
-  version = "0.9.0";
+  version = "0.9.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "11lni9kn0r1y896xg20qjv4yjcyr56h0hx9dprdgjnam4dqcl6lg";
+    sha256 = "ab8cc42faf121344a4e9b13f39a51257f26f410e416c52ea11078cdd00d98a2c";
   };
 
   propagatedBuildInputs = [ termcolor pytest ];
 
+  checkPhase = ''
+    py.test
+  '';
+
   meta = with stdenv.lib; {
     description = "A plugin that changes the default look and feel of py.test";
     homepage = https://github.com/Frozenball/pytest-sugar;
diff --git a/pkgs/development/python-modules/pytest-xdist/default.nix b/pkgs/development/python-modules/pytest-xdist/default.nix
index d671fd9654a4..596ce38ed0ab 100644
--- a/pkgs/development/python-modules/pytest-xdist/default.nix
+++ b/pkgs/development/python-modules/pytest-xdist/default.nix
@@ -1,7 +1,6 @@
 { stdenv, fetchPypi, buildPythonPackage, isPy3k, execnet, pytest, setuptools_scm, pytest-forked }:
 
 buildPythonPackage rec {
-  name = "${pname}-${version}";
   pname = "pytest-xdist";
   version = "1.22.0";
 
@@ -10,21 +9,19 @@ buildPythonPackage rec {
     sha256 = "65228a859191f2c74ee68c127317eefe35eedd3d43fc1431f19240663b0cafcd";
   };
 
-  buildInputs = [ pytest setuptools_scm pytest-forked];
+  nativeBuildInputs = [ setuptools_scm ];
+  buildInputs = [ pytest pytest-forked ];
   propagatedBuildInputs = [ execnet ];
 
-  postPatch = ''
-    rm testing/acceptance_test.py testing/test_remote.py testing/test_slavemanage.py
-  '';
-
   checkPhase = ''
-    py.test testing
+    # Excluded tests access file system
+    py.test testing -k "not test_distribution_rsyncdirs_example \
+                    and not test_rsync_popen_with_path \
+                    and not test_popen_rsync_subdir \
+                    and not test_init_rsync_roots \
+                    and not test_rsyncignore"
   '';
 
-  # Only test on 3.x
-  # INTERNALERROR> AttributeError: 'NoneType' object has no attribute 'getconsumer'
-  doCheck = isPy3k;
-
   meta = with stdenv.lib; {
     description = "py.test xdist plugin for distributed testing and loop-on-failing modes";
     homepage = https://github.com/pytest-dev/pytest-xdist;
diff --git a/pkgs/development/python-modules/pytest/default.nix b/pkgs/development/python-modules/pytest/default.nix
index 91e22baa4ad1..9b7f5cc12de0 100644
--- a/pkgs/development/python-modules/pytest/default.nix
+++ b/pkgs/development/python-modules/pytest/default.nix
@@ -2,7 +2,7 @@
 , setuptools_scm, setuptools, six, pluggy, funcsigs, isPy3k
 }:
 buildPythonPackage rec {
-  version = "3.3.2";
+  version = "3.4.0";
   pname = "pytest";
 
   preCheck = ''
@@ -12,7 +12,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "53548280ede7818f4dc2ad96608b9f08ae2cc2ca3874f2ceb6f97e3583f25bc4";
+    sha256 = "6074ea3b9c999bd6d0df5fa9d12dd95ccd23550df2a582f5f5b848331d2e82ca";
   };
 
   checkInputs = [ hypothesis ];
diff --git a/pkgs/development/python-modules/pytestrunner/default.nix b/pkgs/development/python-modules/pytestrunner/default.nix
index 67af195b68a6..4f15adcd90e5 100644
--- a/pkgs/development/python-modules/pytestrunner/default.nix
+++ b/pkgs/development/python-modules/pytestrunner/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "pytest-runner";
-  version = "3.0";
+  version = "4.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "00v7pi09q60yx0l1kzyklnmr5bp597mir85a9gsi7bdfyly3lz0g";
+    sha256 = "183f3745561b1e00ea51cd97634ba5c540848ab4aa8016a81faba7fb7f33ec76";
   };
 
   buildInputs = [ setuptools_scm pytest ];
diff --git a/pkgs/development/python-modules/python-magic/default.nix b/pkgs/development/python-modules/python-magic/default.nix
new file mode 100644
index 000000000000..d48a6288a7dd
--- /dev/null
+++ b/pkgs/development/python-modules/python-magic/default.nix
@@ -0,0 +1,28 @@
+{ buildPythonPackage, lib, fetchPypi, file, stdenv }:
+
+buildPythonPackage rec {
+  pname = "python-magic";
+  version = "0.4.15";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "f3765c0f582d2dfc72c15f3b5a82aecfae9498bd29ca840d72f37d7bd38bfcd5";
+  };
+
+  postPatch = ''
+    substituteInPlace magic.py --replace "ctypes.util.find_library('magic')" "'${file}/lib/libmagic${stdenv.hostPlatform.extensions.sharedLibrary}'"
+  '';
+
+  doCheck = false;
+
+  # TODO: tests are failing
+  #checkPhase = ''
+  #  ${python}/bin/${python.executable} ./test.py
+  #'';
+
+  meta = {
+    description = "A python interface to the libmagic file type identification library";
+    homepage = https://github.com/ahupp/python-magic;
+    license = lib.licenses.mit;
+  };
+}
diff --git a/pkgs/development/python-modules/python-telegram-bot/default.nix b/pkgs/development/python-modules/python-telegram-bot/default.nix
new file mode 100644
index 000000000000..d55472179101
--- /dev/null
+++ b/pkgs/development/python-modules/python-telegram-bot/default.nix
@@ -0,0 +1,31 @@
+{ stdenv, fetchPypi, buildPythonPackage, certifi, future, urllib3 }:
+
+buildPythonPackage rec {
+  pname = "python-telegram-bot";
+  version = "9.0.0";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0a5b4wfc6ms7kblynw2h3ygpww98kyz5n8iibqbdyykwx8xj7hzm";
+  };
+
+  prePatch = ''
+    rm -rf telegram/vendor
+    substituteInPlace telegram/utils/request.py \
+      --replace "import telegram.vendor.ptb_urllib3.urllib3 as urllib3" "import urllib3 as urllib3" \
+      --replace "import telegram.vendor.ptb_urllib3.urllib3.contrib.appengine as appengine" "import urllib3.contrib.appengine as appengine" \
+      --replace "from telegram.vendor.ptb_urllib3.urllib3.connection import HTTPConnection" "from urllib3.connection import HTTPConnection" \
+      --replace "from telegram.vendor.ptb_urllib3.urllib3.util.timeout import Timeout" "from urllib3.util.timeout import Timeout"
+  '';
+
+  propagatedBuildInputs = [ certifi future urllib3 ];
+
+  doCheck = false;
+
+  meta = with stdenv.lib; {
+    description = "This library provides a pure Python interface for the Telegram Bot API.";
+    homepage = https://python-telegram-bot.org;
+    license = licenses.lgpl3;
+    maintainers = with maintainers; [ veprbl ];
+  };
+}
diff --git a/pkgs/development/python-modules/pythonix/default.nix b/pkgs/development/python-modules/pythonix/default.nix
index dacc27c53a05..6248ed7bf66a 100644
--- a/pkgs/development/python-modules/pythonix/default.nix
+++ b/pkgs/development/python-modules/pythonix/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub, ninja, meson, pkgconfig, gcc7, nixUnstable, isPy3k }:
+{ stdenv, fetchFromGitHub, ninja, meson, pkgconfig, nixUnstable, isPy3k }:
 
 assert isPy3k;
 
@@ -13,7 +13,7 @@ stdenv.mkDerivation rec {
     sha256 = "1piblysypyr442a6najk4mdh87xc377i2fdbfw6fr569z60mnnnj";
   };
 
-  nativeBuildInputs = [ meson pkgconfig ninja gcc7 ];
+  nativeBuildInputs = [ meson pkgconfig ninja ];
 
   buildInputs = [ nixUnstable ];
 
diff --git a/pkgs/development/python-modules/pythonnet/default.nix b/pkgs/development/python-modules/pythonnet/default.nix
new file mode 100644
index 000000000000..98f714c8d538
--- /dev/null
+++ b/pkgs/development/python-modules/pythonnet/default.nix
@@ -0,0 +1,84 @@
+{ lib
+, fetchPypi
+, fetchNuGet
+, buildPythonPackage
+, python
+, pytest
+, pycparser
+, pkgconfig
+, dotnetbuildhelpers
+, clang
+, mono
+}:
+
+let
+
+  UnmanagedExports127 = fetchNuGet {
+    baseName = "UnmanagedExports";
+    version = "1.2.7";
+    sha256 = "0bfrhpmq556p0swd9ssapw4f2aafmgp930jgf00sy89hzg2bfijf";
+    outputFiles = [ "*" ];
+  };
+
+  NUnit360 = fetchNuGet {
+    baseName = "NUnit";
+    version = "3.6.0";
+    sha256 = "0wz4sb0hxlajdr09r22kcy9ya79lka71w0k1jv5q2qj3d6g2frz1";
+    outputFiles = [ "*" ];
+  };
+
+in
+
+buildPythonPackage rec {
+  pname = "pythonnet";
+  version = "2.3.0";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "1hxnkrfj8ark9sbamcxzd63p98vgljfvdwh79qj3ac8pqrgghq80";
+  };
+
+  postPatch = ''
+    substituteInPlace setup.py --replace 'self._install_packages()' '#self._install_packages()'
+  '';
+
+  preConfigure = ''
+    [ -z "$dontPlacateNuget" ] && placate-nuget.sh
+    [ -z "$dontPlacatePaket" ] && placate-paket.sh
+  '';
+
+  nativeBuildInputs = [
+    pytest
+    pycparser
+
+    pkgconfig
+    dotnetbuildhelpers
+    clang
+
+    NUnit360
+    UnmanagedExports127
+  ];
+
+  buildInputs = [
+    mono
+  ];
+
+  preBuild = ''
+    rm -rf packages
+    mkdir packages
+
+    ln -s ${NUnit360}/lib/dotnet/NUnit/ packages/NUnit.3.6.0
+    ln -s ${UnmanagedExports127}/lib/dotnet/NUnit/ packages/UnmanagedExports.1.2.7
+  '';
+
+  checkPhase = ''
+    ${python.interpreter} -m pytest
+  '';
+
+  meta = with lib; {
+    description = ".Net and Mono integration for Python";
+    homepage = https://pythonnet.github.io;
+    license = licenses.mit;
+    maintainers = with maintainers; [ jraygauthier ];
+  };
+}
diff --git a/pkgs/development/python-modules/pytz/default.nix b/pkgs/development/python-modules/pytz/default.nix
new file mode 100644
index 000000000000..65f3d80bdaa7
--- /dev/null
+++ b/pkgs/development/python-modules/pytz/default.nix
@@ -0,0 +1,22 @@
+{ lib, buildPythonPackage, fetchPypi, python }:
+
+buildPythonPackage rec {
+  pname = "pytz";
+  version = "2018.3";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "410bcd1d6409026fbaa65d9ed33bf6dd8b1e94a499e32168acfc7b332e4095c0";
+  };
+
+  checkPhase = ''
+    ${python.interpreter} -m unittest discover -s pytz/tests
+  '';
+
+  meta = with lib; {
+    description = "World timezone definitions, modern and historical";
+    homepage = "http://pythonhosted.org/pytz";
+    license = licenses.mit;
+    maintainers = with maintainers; [ dotlambda ];
+  };
+}
diff --git a/pkgs/development/python-modules/pytzdata/default.nix b/pkgs/development/python-modules/pytzdata/default.nix
index 6de0431edb36..a7c6b6db6b25 100644
--- a/pkgs/development/python-modules/pytzdata/default.nix
+++ b/pkgs/development/python-modules/pytzdata/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "pytzdata";
-  version = "2017.3.1";
+  version = "2018.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1wi3jh39zsa9iiyyhynhj7w5b2p9wdyd0ppavpsrmf3wxvr7cwz8";
+    sha256 = "4e2cceb54335cd6c28caea46b15cd592e2aec5e8b05b0241cbccfb1b23c02ae7";
   };
 
   # No tests
diff --git a/pkgs/development/python-modules/pyyaml/default.nix b/pkgs/development/python-modules/pyyaml/default.nix
new file mode 100644
index 000000000000..a4918bf352dc
--- /dev/null
+++ b/pkgs/development/python-modules/pyyaml/default.nix
@@ -0,0 +1,20 @@
+{ lib, buildPythonPackage, fetchPypi, libyaml }:
+
+buildPythonPackage rec {
+  pname = "PyYAML";
+  version = "3.12";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "592766c6303207a20efc445587778322d7f73b161bd994f227adaa341ba212ab";
+  };
+
+  propagatedBuildInputs = [ libyaml ];
+
+  meta = with lib; {
+    description = "The next generation YAML parser and emitter for Python";
+    homepage = https://github.com/yaml/pyyaml;
+    license = licenses.mit;
+    maintainers = with maintainers; [ dotlambda ];
+  };
+}
diff --git a/pkgs/development/python-modules/quantities/default.nix b/pkgs/development/python-modules/quantities/default.nix
new file mode 100644
index 000000000000..e65329c1b695
--- /dev/null
+++ b/pkgs/development/python-modules/quantities/default.nix
@@ -0,0 +1,28 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, numpy
+, python
+}:
+
+buildPythonPackage rec {
+  pname = "quantities";
+  version = "0.12.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0a03e8511db603c57ca80dee851c43f08d0457f4d592bcac2e154570756cb934";
+  };
+
+  propagatedBuildInputs = [ numpy ];
+
+  checkPhase = ''
+    ${python.interpreter} setup.py test -V 1
+  '';
+
+  meta = {
+    description = "Quantities is designed to handle arithmetic and";
+    homepage = http://python-quantities.readthedocs.io/;
+    license = lib.licenses.bsd2;
+  };
+}
\ No newline at end of file
diff --git a/pkgs/development/python-modules/raven/default.nix b/pkgs/development/python-modules/raven/default.nix
index b6cc70ed787c..33d199ad274a 100644
--- a/pkgs/development/python-modules/raven/default.nix
+++ b/pkgs/development/python-modules/raven/default.nix
@@ -1,12 +1,16 @@
-{ lib, buildPythonPackage, fetchPypi, isPy3k, contextlib2, blinker }:
+{ lib, buildPythonPackage, fetchFromGitHub, isPy3k
+, contextlib2, blinker
+}:
 
 buildPythonPackage rec {
   pname = "raven";
-  version = "6.5.0";
+  version = "6.6.0";
 
-  src = fetchPypi {
-    inherit pname version;
-    sha256 = "84da75114739191bdf2388f296ffd6177e83567a7fbaf2701e034ad6026e4f3b";
+  src = fetchFromGitHub {
+    owner = "getsentry";
+    repo = "raven-python";
+    rev = version;
+    sha256 = "184wpr0zdcm260pxqll9kpmp2ywisn75k8pdm8gc6xmk740in1hj";
   };
 
   # way too many dependencies to run tests
diff --git a/pkgs/development/python-modules/regex/default.nix b/pkgs/development/python-modules/regex/default.nix
index c6279f5e7c41..65de08382239 100644
--- a/pkgs/development/python-modules/regex/default.nix
+++ b/pkgs/development/python-modules/regex/default.nix
@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "regex";
-  version = "2018.01.10";
+  version = "2018.02.08";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "139678fc013b75e486e580c39b4c52d085ed7362e400960f8be1711a414f16b5";
+    sha256 = "2353c0e983c4029caf32016f1dddef623c3117ac282a818468c6d2f5d541698d";
   };
 
   meta = {
diff --git a/pkgs/development/python-modules/requestsexceptions/default.nix b/pkgs/development/python-modules/requestsexceptions/default.nix
index 0321f9abec2c..87af0e78b183 100644
--- a/pkgs/development/python-modules/requestsexceptions/default.nix
+++ b/pkgs/development/python-modules/requestsexceptions/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "requestsexceptions";
-  version = "1.3.0";
+  version = "1.4.0";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0gim00vi7vfq16y8b9m1vpy01grqvrdrbh88jb98qx6n6sk1n54g";
+    sha256 = "b095cbc77618f066d459a02b137b020c37da9f46d9b057704019c9f77dba3065";
   };
 
   propagatedBuildInputs = [ pbr ];
diff --git a/pkgs/development/python-modules/restview/default.nix b/pkgs/development/python-modules/restview/default.nix
index 3c61ea4ded24..a13df64cd03e 100644
--- a/pkgs/development/python-modules/restview/default.nix
+++ b/pkgs/development/python-modules/restview/default.nix
@@ -10,11 +10,11 @@
 buildPythonPackage rec {
   pname = "restview";
   name = "${pname}-${version}";
-  version = "2.8.0";
+  version = "2.8.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "5f6f1523228eab3269f59dd03ac560f7d370cd81df6fdbcb4914b5e6bd896a11";
+    sha256 = "45320b4e52945d23b3f1aeacc7ff97a3b798204fe625f8b81ed5322326d5bcd1";
   };
 
   propagatedBuildInputs = [ docutils readme_renderer pygments ];
diff --git a/pkgs/development/python-modules/ropper/default.nix b/pkgs/development/python-modules/ropper/default.nix
index b35145872dd1..82b809a1e917 100644
--- a/pkgs/development/python-modules/ropper/default.nix
+++ b/pkgs/development/python-modules/ropper/default.nix
@@ -8,11 +8,11 @@
 
 buildPythonApplication rec {
   pname = "ropper";
-  version = "1.11.3";
+  version = "1.11.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "77d9b03083d0a098261a1d2856cd330ea3db520511a78472e421a00526aa220c";
+    sha256 = "33777d0c3ddd9ca7bc48f53dbe2c4a222a567f1125c43b1c34fb1b360d0b19dc";
   };
   # XXX tests rely on user-writeable /dev/shm to obtain process locks and return PermissionError otherwise
   # workaround: sudo chmod 777 /dev/shm
diff --git a/pkgs/development/python-modules/s3transfer/default.nix b/pkgs/development/python-modules/s3transfer/default.nix
index 3311af5e8869..9b74b9c8ba35 100644
--- a/pkgs/development/python-modules/s3transfer/default.nix
+++ b/pkgs/development/python-modules/s3transfer/default.nix
@@ -14,11 +14,11 @@
 
 buildPythonPackage rec {
   pname = "s3transfer";
-  version = "0.1.12";
+  version = "0.1.13";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "07hjj1cy62sc3rh5lhna9mhylp7h7aak4v6mf6809q4nc8j1p28h";
+    sha256 = "90dc18e028989c609146e241ea153250be451e05ecc0c2832565231dacdf59c1";
   };
 
   foo = 1;
diff --git a/pkgs/development/python-modules/scapy/default.nix b/pkgs/development/python-modules/scapy/default.nix
index 6670394ac0bb..1f4a34d18a38 100644
--- a/pkgs/development/python-modules/scapy/default.nix
+++ b/pkgs/development/python-modules/scapy/default.nix
@@ -1,22 +1,32 @@
-{ stdenv, fetchurl, buildPythonPackage, isPy3k, isPyPy }:
+{ stdenv, buildPythonPackage, fetchFromGitHub, isPy3k, isPyPy
+, matplotlib, pycrypto, ecdsa
+# Python3: pyx
+}:
 
 buildPythonPackage rec {
   pname = "scapy";
-  version = "2.2.0";
+  version = "2.3.3";
   name = pname + "-" + version;
 
   disabled = isPy3k || isPyPy;
 
-  src = fetchurl {
-    url = "http://www.secdev.org/projects/scapy/files/${name}.tar.gz";
-    sha256 = "1bqmp0xglkndrqgmybpwmzkv462mir8qlkfwsxwbvvzh9li3ndn5";
+  src = fetchFromGitHub {
+    owner = "secdev";
+    repo = "scapy";
+    rev = "v${version}";
+    sha256 = "1c22407vhksnhc0rwrslnp9zy05qmk2zmdm2imm3iw7g6kx7gak1";
   };
 
+  # Temporary workaround, only needed for 2.3.3
+  patches = [ ./fix-version-1.patch ./fix-version-2.patch ];
+
+  propagatedBuildInputs = [ matplotlib pycrypto ecdsa ];
+
   meta = with stdenv.lib; {
     description = "Powerful interactive network packet manipulation program";
     homepage = http://www.secdev.org/projects/scapy/;
     license = licenses.gpl2;
     platforms = platforms.linux;
-    maintainers = with maintainers; [ bjornfor ];
+    maintainers = with maintainers; [ primeos bjornfor ];
   };
 }
diff --git a/pkgs/development/python-modules/scapy/fix-version-1.patch b/pkgs/development/python-modules/scapy/fix-version-1.patch
new file mode 100644
index 000000000000..3864a41964e2
--- /dev/null
+++ b/pkgs/development/python-modules/scapy/fix-version-1.patch
@@ -0,0 +1,11 @@
+--- a/setup.py	2018-02-15 22:14:08.531591678 +0100
++++ b/setup.py	2018-02-15 22:14:57.947703737 +0100
+@@ -47,7 +47,7 @@
+ 
+ setup(
+     name='scapy',
+-    version=__import__('scapy').VERSION,
++    version='2.3.3',
+     packages=[
+         'scapy',
+         'scapy/arch',
diff --git a/pkgs/development/python-modules/scapy/fix-version-2.patch b/pkgs/development/python-modules/scapy/fix-version-2.patch
new file mode 100644
index 000000000000..62d43b51fbb9
--- /dev/null
+++ b/pkgs/development/python-modules/scapy/fix-version-2.patch
@@ -0,0 +1,11 @@
+--- a/scapy/__init__.py	2017-12-29 18:57:35.315472160 +0100
++++ b/scapy/__init__.py	2018-02-15 22:36:43.102132489 +0100
+@@ -73,7 +73,7 @@
+                 tag = f.read()
+             return tag
+         except:
+-            return 'unknown.version'
++            return '2.3.3'
+ 
+ VERSION = _version()
+ 
diff --git a/pkgs/development/python-modules/shapely/default.nix b/pkgs/development/python-modules/shapely/default.nix
index dab3542b809e..7246205619f1 100644
--- a/pkgs/development/python-modules/shapely/default.nix
+++ b/pkgs/development/python-modules/shapely/default.nix
@@ -6,11 +6,11 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "Shapely";
-  version = "1.6.3";
+  version = "1.6.4.post1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "14152f111c7711fc6756fd538ec12fc8cdde7419f869b244922f71f61b2a6c6b";
+    sha256 = "30df7572d311514802df8dc0e229d1660bc4cbdcf027a8281e79c5fc2fcf02f2";
   };
 
   buildInputs = [ geos glibcLocales cython ];
diff --git a/pkgs/development/python-modules/simplegeneric/default.nix b/pkgs/development/python-modules/simplegeneric/default.nix
new file mode 100644
index 000000000000..491e218154c0
--- /dev/null
+++ b/pkgs/development/python-modules/simplegeneric/default.nix
@@ -0,0 +1,21 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+}:
+
+buildPythonPackage rec {
+  pname = "simplegeneric";
+  version = "0.8.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    extension = "zip";
+    sha256 = "dc972e06094b9af5b855b3df4a646395e43d1c9d0d39ed345b7393560d0b9173";
+  };
+
+  meta = {
+    description = "Simple generic functions";
+    homepage = http://cheeseshop.python.org/pypi/simplegeneric;
+    license = lib.licenses.zpl21;
+  };
+}
\ No newline at end of file
diff --git a/pkgs/development/python-modules/sphinx/default.nix b/pkgs/development/python-modules/sphinx/default.nix
index 6f3d0b3c117b..2256bcc7310f 100644
--- a/pkgs/development/python-modules/sphinx/default.nix
+++ b/pkgs/development/python-modules/sphinx/default.nix
@@ -27,10 +27,10 @@
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "Sphinx";
-  version = "1.6.6";
+  version = "1.7.0";
   src = fetchPypi {
     inherit pname version;
-    sha256 = "c39a6fa41bd3ec6fc10064329a664ed3a3ca2e27640a823dc520c682e4433cdb";
+    sha256 = "278b7923f3f4ed2a1d1359f0ae94d89ac90ddd4189e8362f4b4d3baa2afe6b4a";
   };
   LC_ALL = "en_US.UTF-8";
 
diff --git a/pkgs/development/python-modules/sqlalchemy/default.nix b/pkgs/development/python-modules/sqlalchemy/default.nix
index 175aa4a6c3ab..18540cb63f8d 100644
--- a/pkgs/development/python-modules/sqlalchemy/default.nix
+++ b/pkgs/development/python-modules/sqlalchemy/default.nix
@@ -11,11 +11,11 @@
 buildPythonPackage rec {
   pname = "SQLAlchemy";
   name = "${pname}-${version}";
-  version = "1.2.1";
+  version = "1.2.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "9ede7070d6fd18f28058be88296ed67893e2637465516d6a596cd9afea97b154";
+    sha256 = "9e9ec143e2e246f385cfb2de8daa89d2fa466279addcb7be9e102988fdf33d24";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/sqlmap/default.nix b/pkgs/development/python-modules/sqlmap/default.nix
index dd7fdc173e5e..0fa889b88f26 100644
--- a/pkgs/development/python-modules/sqlmap/default.nix
+++ b/pkgs/development/python-modules/sqlmap/default.nix
@@ -5,12 +5,12 @@
 
 buildPythonPackage rec {
   pname = "sqlmap";
-  version = "1.2";
+  version = "1.2.2";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "18ac6392a710f0cc106c28c4e27e43e8f1b25cb46fb8b6714836212607c07b10";
+    sha256 = "6256e0d5ab6d465152c8a8a21bdb97b50e155255d6bedd586ce214ed7a1fb9d7";
   };
 
   # No tests in archive
diff --git a/pkgs/development/python-modules/stripe/default.nix b/pkgs/development/python-modules/stripe/default.nix
index 22c047fc54e2..7e7aa4756bbe 100644
--- a/pkgs/development/python-modules/stripe/default.nix
+++ b/pkgs/development/python-modules/stripe/default.nix
@@ -3,7 +3,7 @@
 
 buildPythonPackage rec {
   pname = "stripe";
-  version = "1.77.1";
+  version = "1.77.2";
   name = "${pname}-${version}";
 
   # Tests require network connectivity and there's no easy way to disable
@@ -12,7 +12,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d1c638b417301849ff4ee0327332cfdec96edda83c79b08af307339138077d59";
+    sha256 = "3bcd55108dd2c0e853a91147ee843bc375f35767e64d0f7680e5bd82ddb7fbf1";
   };
 
   buildInputs = [ unittest2 mock ];
diff --git a/pkgs/development/python-modules/supervise_api/default.nix b/pkgs/development/python-modules/supervise_api/default.nix
index f16310131522..f73aba0a5f9a 100644
--- a/pkgs/development/python-modules/supervise_api/default.nix
+++ b/pkgs/development/python-modules/supervise_api/default.nix
@@ -8,13 +8,13 @@
 
 buildPythonPackage rec {
   pname = "supervise_api";
-  version = "0.3.0";
+  version = "0.4.0";
 
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "13gy2m14zh6lbdm45b40ffjnw8y3dapz9hvzpwk8vyvbxj4f1vaf";
+    sha256 = "029h1mlfhkm9lw043rawh24ld8md620y94k6c1l9hs5vvyq4fs84";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/sybil/default.nix b/pkgs/development/python-modules/sybil/default.nix
index 1370c59ace84..31fd0977c144 100644
--- a/pkgs/development/python-modules/sybil/default.nix
+++ b/pkgs/development/python-modules/sybil/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonApplication rec {
   pname   = "sybil";
-  version = "1.0.6";
+  version = "1.0.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "5bd7dd09eff68cbec9062e6950124fadfaaccbc0f50b23c1037f4d70ae86f0f1";
+    sha256 = "86332553392f865403883e44695bd8d9d47fe3887c01e17591955237b8fd2d8f";
   };
 
   checkInputs = [ pytest nose ];
diff --git a/pkgs/development/python-modules/sympy/default.nix b/pkgs/development/python-modules/sympy/default.nix
new file mode 100644
index 000000000000..67c799e554eb
--- /dev/null
+++ b/pkgs/development/python-modules/sympy/default.nix
@@ -0,0 +1,34 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, glibcLocales
+, mpmath
+}:
+
+buildPythonPackage rec {
+  pname = "sympy";
+  version = "1.1.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "ac5b57691bc43919dcc21167660a57cc51797c28a4301a6144eff07b751216a4";
+  };
+
+  checkInputs = [ glibcLocales ];
+
+  propagatedBuildInputs = [ mpmath ];
+
+  # Bunch of failures including transients.
+  doCheck = false;
+
+  preCheck = ''
+    export LANG="en_US.UTF-8"
+  '';
+
+  meta = {
+    description = "A Python library for symbolic mathematics";
+    homepage    = http://www.sympy.org/;
+    license     = lib.licenses.bsd3;
+    maintainers = with lib.maintainers; [ lovek323 ];
+  };
+}
\ No newline at end of file
diff --git a/pkgs/development/python-modules/tensorflow-tensorboard/default.nix b/pkgs/development/python-modules/tensorflow-tensorboard/default.nix
index 9f48b8fb971a..f0b4e6f341d4 100644
--- a/pkgs/development/python-modules/tensorflow-tensorboard/default.nix
+++ b/pkgs/development/python-modules/tensorflow-tensorboard/default.nix
@@ -1,22 +1,19 @@
-{ stdenv
-, fetchPypi
-, buildPythonPackage
-, isPy3k
+{ stdenv, lib, fetchPypi, buildPythonPackage, isPy3k
 , bleach_1_5_0
 , numpy
 , werkzeug
 , protobuf
 , markdown
+, futures
 }:
 
-# tensorflow is built from a downloaded wheel, because the upstream
-# project's build system is an arcane beast based on
-# bazel. Untangling it and building the wheel from source is an open
-# problem.
+# tensorflow is built from a downloaded wheel, because
+# https://github.com/tensorflow/tensorboard/issues/719
+# blocks buildBazelPackage.
 
 buildPythonPackage rec {
   pname = "tensorflow-tensorboard";
-  version = "0.1.5";
+  version = "1.5.1";
   name = "${pname}-${version}";
   format = "wheel";
 
@@ -26,16 +23,16 @@ buildPythonPackage rec {
     format = "wheel";
   } // (if isPy3k then {
     python = "py3";
-    sha256 = "0sfia05y1mzgy371faj96vgzhag1rgpa3gnbz9w1fay13jryw26x";
+    sha256 = "1cydgvrr0s05xqz1v9z2wdiv60gzbs8wv9wvbflw5700a2llb63l";
   } else {
     python = "py2";
-    sha256 = "0qx4f55zp54x079kxir4zz5b1ckiglsdcb9afz5wcdj6af4a6czg";
+    sha256 = "0dhljddlirq6nr84zg4yrk5k69gj3x2abb6wg3crgrparb6qbya7";
   }));
 
-  propagatedBuildInputs = [ bleach_1_5_0 numpy werkzeug protobuf markdown ];
+  propagatedBuildInputs = [ bleach_1_5_0 numpy werkzeug protobuf markdown ] ++ lib.optional (!isPy3k) futures;
 
   meta = with stdenv.lib; {
-    description = "TensorFlow helps the tensors flow";
+    description = "TensorFlow's Visualization Toolkit";
     homepage = http://tensorflow.org;
     license = licenses.asl20;
     maintainers = with maintainers; [ abbradar ];
diff --git a/pkgs/development/python-modules/tensorflow/default.nix b/pkgs/development/python-modules/tensorflow/default.nix
index 63630c1e1463..e51ceb313ef2 100644
--- a/pkgs/development/python-modules/tensorflow/default.nix
+++ b/pkgs/development/python-modules/tensorflow/default.nix
@@ -1,8 +1,8 @@
-{ stdenv, lib, fetchFromGitHub, fetchpatch, symlinkJoin, buildPythonPackage, isPy3k, pythonOlder
-, bazel, which, swig, binutils, glibcLocales
+{ stdenv, buildBazelPackage, lib, fetchFromGitHub, fetchpatch, symlinkJoin
+, buildPythonPackage, isPy3k, pythonOlder, pythonAtLeast
+, which, swig, binutils, glibcLocales
 , python, jemalloc, openmpi
-, numpy, six, protobuf, tensorflow-tensorboard, backports_weakref
-, wheel, mock, scipy
+, numpy, six, protobuf, tensorflow-tensorboard, backports_weakref, mock, enum34, absl-py
 , xlaSupport ? true
 , cudaSupport ? false, nvidia_x11 ? null, cudatoolkit ? null, cudnn ? null
 # Default from ./configure script
@@ -12,7 +12,8 @@
 , fmaSupport ? false
 }:
 
-assert cudaSupport -> cudatoolkit != null
+assert cudaSupport -> nvidia_x11 != null
+                   && cudatoolkit != null
                    && cudnn != null;
 
 # unsupported combination
@@ -27,40 +28,49 @@ let
     paths = [ cudatoolkit.out cudatoolkit.lib ];
   };
 
-  cudaLibPath = lib.makeLibraryPath [ cudatoolkit.out cudatoolkit.lib nvidia_x11 cudnn ];
-
   tfFeature = x: if x then "1" else "0";
 
-  common = rec {
-    version = "1.3.1";
+  version = "1.5.0";
+
+  pkg = buildBazelPackage rec {
+    name = "tensorflow-build-${version}";
 
     src = fetchFromGitHub {
       owner = "tensorflow";
       repo = "tensorflow";
       rev = "v${version}";
-      sha256 = "0gvi32dvv4ynr05p0gg5i0a6c55pig48k5qm7zslcqnp4sifwx0i";
+      sha256 = "1c4djsaip901nasm7a6dsimr02bsv70a7b1g0kysb4n39qpdh22q";
     };
 
-    nativeBuildInputs = [ swig which wheel scipy ];
+    patches = [
+      # Fix build with Bazel >= 0.10
+      (fetchpatch {
+        url = "https://github.com/tensorflow/tensorflow/commit/6fcfab770c2672e2250e0f5686b9545d99eb7b2b.patch";
+        sha256 = "0p61za1mx3a7gj1s5lsps16fcw18iwnvq2b46v1kyqfgq77a12vb";
+      })
+      (fetchpatch {
+        url = "https://github.com/tensorflow/tensorflow/commit/3f57956725b553d196974c9ad31badeb3eabf8bb.patch";
+        sha256 = "11dja5gqy0qw27sc9b6yw9r0lfk8dznb32vrqqfcnypk2qmv26va";
+      })
+    ];
 
-    buildInputs = [ python jemalloc openmpi glibcLocales ]
-      ++ lib.optionals cudaSupport [ cudatoolkit cudnn ];
+    nativeBuildInputs = [ swig which ];
 
-    propagatedBuildInputs = [ numpy six protobuf ]
-                            ++ lib.optional (!isPy3k) mock
-                            ++ lib.optional (pythonOlder "3.4") backports_weakref
-                            ++ lib.optional withTensorboard tensorflow-tensorboard;
+    buildInputs = [ python jemalloc openmpi glibcLocales numpy ]
+      ++ lib.optionals cudaSupport [ cudatoolkit cudnn nvidia_x11 ];
 
     preConfigure = ''
       patchShebangs configure
-      export HOME="$NIX_BUILD_TOP"
 
       export PYTHON_BIN_PATH="${python.interpreter}"
+      export PYTHON_LIB_PATH="$NIX_BUILD_TOP/site-packages"
       export TF_NEED_GCP=1
       export TF_NEED_HDFS=1
-      export TF_NEED_CUDA=${tfFeature cudaSupport}
-      export TF_NEED_MPI=1
       export TF_ENABLE_XLA=${tfFeature xlaSupport}
+      export CC_OPT_FLAGS=" "
+      # https://github.com/tensorflow/tensorflow/issues/14454
+      export TF_NEED_MPI=${tfFeature cudaSupport}
+      export TF_NEED_CUDA=${tfFeature cudaSupport}
       ${lib.optionalString cudaSupport ''
         export CUDA_TOOLKIT_PATH=${cudatoolkit_joined}
         export TF_CUDA_VERSION=${cudatoolkit.majorVersion}
@@ -70,13 +80,11 @@ let
         export TF_CUDA_COMPUTE_CAPABILITIES=${lib.concatStringsSep "," cudaCapabilities}
       ''}
 
-      # There is _no_ non-interactive mode of configure.
-      sed -i \
-        -e 's,read -p,echo,g' \
-        -e 's,lib64,lib,g' \
-        configure
+      mkdir -p "$PYTHON_LIB_PATH"
     '';
 
+    NIX_LDFLAGS = lib.optionals cudaSupport [ "-lcublas" "-lcudnn" "-lcuda" "-lcudart" ];
+
     hardeningDisable = [ "all" ];
 
     bazelFlags = [ "--config=opt" ]
@@ -87,101 +95,59 @@ let
 
     bazelTarget = "//tensorflow/tools/pip_package:build_pip_package";
 
-    meta = with stdenv.lib; {
-      description = "Computation using data flow graphs for scalable machine learning";
-      homepage = "http://tensorflow.org";
-      license = licenses.asl20;
-      maintainers = with maintainers; [ jyp abbradar ];
-      platforms = with platforms; if cudaSupport then linux else linux ++ darwin;
-    };
-  };
+    fetchAttrs = {
+      preInstall = ''
+        rm -rf $bazelOut/external/{bazel_tools,\@bazel_tools.marker,local_*,\@local_*}
+      '';
 
-in buildPythonPackage (common // {
-  pname = "tensorflow";
-  version = common.version;
-  name = "tensorflow-${common.version}";
-
-  deps = stdenv.mkDerivation (common // {
-    name = "tensorflow-external-${common.version}";
-
-    nativeBuildInputs = common.nativeBuildInputs ++ [ bazel ];
-
-    preConfigure = common.preConfigure + ''
-      export PYTHON_LIB_PATH="$(pwd)/site-packages"
-    '';
-
-    buildPhase = ''
-      mkdir site-packages
-      bazel --output_base="$(pwd)/output" fetch $bazelFlags $bazelTarget
-    '';
+      sha256 = "1nc98aqrp14q7llypcwaa0kdn9xi7r0p1mnd3vmmn1m299py33ca";
+    };
 
-    installPhase = ''
-      rm -rf output/external/{bazel_tools,\@bazel_tools.marker,local_*,\@local_*}
-      # Patching markers to make them deterministic
-      for i in output/external/\@*.marker; do
-        sed -i 's, -\?[0-9][0-9]*$, 1,' "$i"
-      done
-      # Patching symlinks to remove build directory reference
-      find output/external -type l | while read symlink; do
-        ln -sf $(readlink "$symlink" | sed "s,$NIX_BUILD_TOP,NIX_BUILD_TOP,") "$symlink"
-      done
-
-      cp -r output/external $out
-    '';
+    buildAttrs = {
+      preBuild = ''
+        patchShebangs .
+        find -type f -name CROSSTOOL\* -exec sed -i \
+          -e 's,/usr/bin/ar,${binutils.bintools}/bin/ar,g' \
+          {} \;
+      '';
+
+      installPhase = ''
+        sed -i 's,.*bdist_wheel.*,cp -rL . "$out"; exit 0,' bazel-bin/tensorflow/tools/pip_package/build_pip_package 
+        bazel-bin/tensorflow/tools/pip_package/build_pip_package $PWD/dist
+      '';
+    };
 
     dontFixup = true;
+  };
 
-    outputHashMode = "recursive";
-    outputHashAlgo = "sha256";
-    outputHash = "0xs2n061gnpizfcnhs5jjpfk2av634j1l2l17zhy10bbmrwn3vrp";
-  });
-
-  nativeBuildInputs = common.nativeBuildInputs ++ [ (bazel.override { enableNixHacks = true; }) ];
-
-  configurePhase = ''
-    runHook preConfigure
-    export PYTHON_LIB_PATH="$out/${python.sitePackages}"
-    ./configure
-    runHook postConfigure
-  '';
-
-  buildPhase = ''
-    mkdir -p output/external
-    cp -r $deps/* output/external
-    chmod -R +w output
-    find output -type l | while read symlink; do
-      ln -sf $(readlink "$symlink" | sed "s,NIX_BUILD_TOP,$NIX_BUILD_TOP,") "$symlink"
-    done
-
-    patchShebangs .
-    find -type f -name CROSSTOOL\* -exec sed -i \
-      -e 's,/usr/bin/ar,${binutils}/bin/ar,g' \
-      {} \;
-
-    mkdir -p $out/${python.sitePackages}
-    bazel --output_base="$(pwd)/output" build $bazelFlags $bazelTarget
+in buildPythonPackage rec {
+  pname = "tensorflow";
+  inherit version;
+  name = "${pname}-${version}";
 
-    bazel-bin/tensorflow/tools/pip_package/build_pip_package $PWD/dist
-  '';
+  src = pkg;
 
-  # tensorflow depends on tensorflow_tensorboard, which cannot be
-  # built at the moment (some of its dependencies do not build
-  # [htlm5lib9999999 (seven nines) -> tensorboard], and it depends on an old version of
-  # bleach) Hence we disable dependency checking for now.
   installFlags = lib.optional (!withTensorboard) "--no-dependencies";
 
-  # Tests are slow and impure.
-  doCheck = false;
-
-  # For some reason, CUDA is not retained in RPATH.
-  postFixup = lib.optionalString cudaSupport ''
-    libPath="$out/${python.sitePackages}/tensorflow/python/_pywrap_tensorflow_internal.so"
-    patchelf --set-rpath "$(patchelf --print-rpath "$libPath"):${cudaLibPath}" "$libPath"
+  postPatch = lib.optionalString (pythonAtLeast "3.4") ''
+    sed -i '/enum34/d' setup.py
   '';
 
-  doInstallCheck = true;
-  installCheckPhase = ''
-    cd $NIX_BUILD_TOP
+  propagatedBuildInputs = [ numpy six protobuf absl-py ]
+                 ++ lib.optional (!isPy3k) mock
+                 ++ lib.optionals (pythonOlder "3.4") [ backports_weakref enum34 ]
+                 ++ lib.optional withTensorboard tensorflow-tensorboard;
+
+  # Actual tests are slow and impure.
+  checkPhase = ''
     ${python.interpreter} -c "import tensorflow"
   '';
-})
+
+  meta = with stdenv.lib; {
+    description = "Computation using data flow graphs for scalable machine learning";
+    homepage = "http://tensorflow.org";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ jyp abbradar ];
+    platforms = with platforms; if cudaSupport then linux else linux ++ darwin;
+  };
+}
diff --git a/pkgs/development/python-modules/testfixtures/default.nix b/pkgs/development/python-modules/testfixtures/default.nix
index 498c722a0464..933b4be1caf3 100644
--- a/pkgs/development/python-modules/testfixtures/default.nix
+++ b/pkgs/development/python-modules/testfixtures/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "testfixtures";
-  version = "5.3.1";
+  version = "5.4.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "670ade9410b7132278209e6a2e893caf098b040c4ba4d5ea848367a9c5588728";
+    sha256 = "338aed9695c432b7c9b8a271dabb521e3e7e2c96b11f7b4e60552f1c8408a8f0";
   };
 
   checkInputs = [ mock manuel pytest sybil zope_component ];
diff --git a/pkgs/development/python-modules/testtools/default.nix b/pkgs/development/python-modules/testtools/default.nix
index eb6a6694b05c..1a99378a541b 100644
--- a/pkgs/development/python-modules/testtools/default.nix
+++ b/pkgs/development/python-modules/testtools/default.nix
@@ -4,33 +4,26 @@
 , pbr
 , python_mimeparse
 , extras
-, lxml
 , unittest2
 , traceback2
-, isPy3k
-, fixtures
-, pyrsistent
+, testscenarios
 }:
 
-
-
 buildPythonPackage rec {
   pname = "testtools";
   version = "2.3.0";
 
-  # Python 2 only judging from SyntaxError
-#   disabled = isPy3k;
-
   src = fetchPypi {
     inherit pname version;
     sha256 = "5827ec6cf8233e0f29f51025addd713ca010061204fdea77484a2934690a0559";
   };
 
-  propagatedBuildInputs = [ pbr python_mimeparse extras lxml unittest2 pyrsistent ];
+  propagatedBuildInputs = [ pbr python_mimeparse extras unittest2 ];
   buildInputs = [ traceback2 ];
 
-  # No tests in archive
+  # testscenarios has a circular dependency on testtools
   doCheck = false;
+  checkInputs = [ testscenarios ];
 
   # testtools 2.0.0 and up has a circular run-time dependency on futures
   postPatch = ''
@@ -42,4 +35,4 @@ buildPythonPackage rec {
     homepage = https://pypi.python.org/pypi/testtools;
     license = lib.licenses.mit;
   };
-}
\ No newline at end of file
+}
diff --git a/pkgs/development/python-modules/thespian/default.nix b/pkgs/development/python-modules/thespian/default.nix
index 1a2aced6858b..e4ed824d2302 100644
--- a/pkgs/development/python-modules/thespian/default.nix
+++ b/pkgs/development/python-modules/thespian/default.nix
@@ -1,14 +1,14 @@
 { stdenv, fetchPypi, buildPythonPackage, lib }:
 
 buildPythonPackage rec {
-  version = "3.9.1";
+  version = "3.9.2";
   pname = "thespian";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "0b303bv85176xd5mf3q5j549s28wi70ck2xxgj1cvpydh23dzipb";
+    sha256 = "aec9793fecf45bb91fe919dc61b5c48a4aadfb9f94b06cd92883df7952eacf95";
   };
 
   # Do not run the test suite: it takes a long time and uses
diff --git a/pkgs/development/python-modules/tifffile/default.nix b/pkgs/development/python-modules/tifffile/default.nix
index b0c3131785f3..12edef190dcc 100644
--- a/pkgs/development/python-modules/tifffile/default.nix
+++ b/pkgs/development/python-modules/tifffile/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "tifffile";
-  version = "0.13.4";
+  version = "0.13.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "43d3903e8ea4542aaa4759ec3683641555d3a15e68fa5a41aaf14cce4110641a";
+    sha256 = "bca0fc9eaf609a27ebd99d8466e05d5a6e79389957f17582b70643dbca65e3d8";
   };
 
   checkInputs = [ nose ];
diff --git a/pkgs/development/python-modules/trezor/default.nix b/pkgs/development/python-modules/trezor/default.nix
index cb4b63ade81d..16fc8530a0da 100644
--- a/pkgs/development/python-modules/trezor/default.nix
+++ b/pkgs/development/python-modules/trezor/default.nix
@@ -1,20 +1,18 @@
-{ lib, fetchPypi, buildPythonPackage, protobuf, hidapi, ecdsa, mnemonic
-, requests
+{ lib, fetchPypi, buildPythonPackage,
+  protobuf, hidapi, ecdsa, mnemonic, requests, pyblake2, click, libusb1
 }:
 
 buildPythonPackage rec {
   name = "${pname}-${version}";
   pname = "trezor";
-  version = "0.7.16";
+  version = "0.9.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "6bdb69fc125ba705854e21163be6c7da3aa17c2a3a84f40b6d8a3f6e4a8cb314";
+    sha256 = "2dd01e11d669cb8f5e40fcf1748bcabc41fb5f41edb010fc807dc3088f9bd7de";
   };
 
-  propagatedBuildInputs = [ protobuf hidapi requests mnemonic ];
-
-  buildInputs = [ ecdsa ];
+  propagatedBuildInputs = [ protobuf hidapi ecdsa mnemonic requests pyblake2 click libusb1 ];
 
   # There are no actual tests: "ImportError: No module named tests"
   doCheck = false;
diff --git a/pkgs/development/python-modules/txtorcon/default.nix b/pkgs/development/python-modules/txtorcon/default.nix
index 60947bc769c7..cd2d6c9a3656 100644
--- a/pkgs/development/python-modules/txtorcon/default.nix
+++ b/pkgs/development/python-modules/txtorcon/default.nix
@@ -26,8 +26,10 @@ buildPythonPackage rec {
     substituteInPlace requirements.txt --replace "ipaddress>=1.0.16" ""
   '';
 
+  # Skip a failing test until fixed upstream:
+  # https://github.com/meejah/txtorcon/issues/250
   checkPhase = ''
-    pytest .
+    pytest --ignore=test/test_util.py .
   '';
 
   meta = {
diff --git a/pkgs/development/python-modules/typing/default.nix b/pkgs/development/python-modules/typing/default.nix
new file mode 100644
index 000000000000..d1a9185d5a14
--- /dev/null
+++ b/pkgs/development/python-modules/typing/default.nix
@@ -0,0 +1,29 @@
+{ lib, buildPythonPackage, fetchPypi, pythonOlder, isPy3k, python }:
+
+let
+  testDir = if isPy3k then "src" else "python2";
+
+in buildPythonPackage rec {
+  pname = "typing";
+  version = "3.6.4";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "d400a9344254803a2368533e4533a4200d21eb7b6b729c173bc38201a74db3f2";
+  };
+
+  # Error for Python3.6: ImportError: cannot import name 'ann_module'
+  # See https://github.com/python/typing/pull/280
+  doCheck = pythonOlder "3.6";
+
+  checkPhase = ''
+    cd ${testDir}
+    ${python.interpreter} -m unittest discover
+  '';
+
+  meta = with lib; {
+    description = "Backport of typing module to Python versions older than 3.5";
+    homepage = https://docs.python.org/3/library/typing.html;
+    license = licenses.psfl;
+  };
+}
diff --git a/pkgs/development/python-modules/voluptuous/default.nix b/pkgs/development/python-modules/voluptuous/default.nix
index 00c13cba0669..0d4f250509f0 100644
--- a/pkgs/development/python-modules/voluptuous/default.nix
+++ b/pkgs/development/python-modules/voluptuous/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "voluptuous";
-  version = "0.10.5";
+  version = "0.11.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "15i3gaap8ilhpbah1ffc6q415wkvliqxilc6s69a4rinvkw6cx3s";
+    sha256 = "af7315c9fa99e0bfd195a21106c82c81619b42f0bd9b6e287b797c6b6b6a9918";
   };
 
   checkInputs = [ nose ];
diff --git a/pkgs/development/python-modules/webcolors/default.nix b/pkgs/development/python-modules/webcolors/default.nix
new file mode 100644
index 000000000000..d530eda39d97
--- /dev/null
+++ b/pkgs/development/python-modules/webcolors/default.nix
@@ -0,0 +1,25 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, python
+}:
+
+buildPythonPackage rec {
+  pname = "webcolors";
+  version = "1.8.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "030562f624467a9901f0b455fef05486a88cfb5daa1e356bd4aacea043850b59";
+  };
+
+  checkPhase = ''
+    ${python.interpreter} -m unittest discover -s tests
+  '';
+
+  meta = {
+    description = "Library for working with color names/values defined by the HTML and CSS specifications";
+    homepage = https://bitbucket.org/ubernostrum/webcolors/overview/;
+    license = lib.licenses.bsd3;
+  };
+}
\ No newline at end of file
diff --git a/pkgs/development/python-modules/weboob/default.nix b/pkgs/development/python-modules/weboob/default.nix
new file mode 100644
index 000000000000..b71e4d3a4fff
--- /dev/null
+++ b/pkgs/development/python-modules/weboob/default.nix
@@ -0,0 +1,38 @@
+{ buildPythonPackage, fetchurl, stdenv, isPy27
+, nose, pillow, prettytable, pyyaml, dateutil, gdata
+, requests, mechanize, feedparser, lxml, gnupg, pyqt5
+, libyaml, simplejson, cssselect, futures, pdfminer
+, termcolor, google_api_python_client, html2text
+, unidecode
+}:
+
+buildPythonPackage rec {
+  pname = "weboob";
+  version = "1.3";
+  disabled = ! isPy27;
+
+  src = fetchurl {
+    url = "https://symlink.me/attachments/download/356/${pname}-${version}.tar.gz";
+    sha256 = "0m5yh49lplvb57dfilczh65ky35fshp3g7ni31pwfxwqi1f7i4f9";
+  };
+
+  setupPyBuildFlags = ["--qt" "--xdg"];
+
+  checkInputs = [ nose ];
+
+  propagatedBuildInputs = [ pillow prettytable pyyaml dateutil
+    gdata requests mechanize feedparser lxml gnupg pyqt5 libyaml
+    simplejson cssselect futures pdfminer termcolor google_api_python_client
+    html2text unidecode ];
+
+  checkPhase = ''
+    nosetests
+  '';
+
+  meta = {
+    homepage = http://weboob.org;
+    description = "Collection of applications and APIs to interact with websites without requiring the user to open a browser";
+    license = stdenv.lib.licenses.agpl3;
+  };
+}
+
diff --git a/pkgs/development/python-modules/widgetsnbextension/default.nix b/pkgs/development/python-modules/widgetsnbextension/default.nix
index ab63b444af6d..3228e928e193 100644
--- a/pkgs/development/python-modules/widgetsnbextension/default.nix
+++ b/pkgs/development/python-modules/widgetsnbextension/default.nix
@@ -8,11 +8,11 @@
 buildPythonPackage rec {
   pname = "widgetsnbextension";
   name = "${pname}-${version}";
-  version = "3.1.0";
+  version = "3.1.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "67fc28c3b9fede955d69bccbd92784e3f0c6d0dee3a71532cd3367c257feb178";
+    sha256 = "79f164a644620abbe351440a70468ac3a5b22b392afa4577c8d5f91577a2669b";
   };
 
   propagatedBuildInputs = [ notebook ];
diff --git a/pkgs/development/python-modules/yapf/default.nix b/pkgs/development/python-modules/yapf/default.nix
index 05913ab61c5e..d257db704451 100644
--- a/pkgs/development/python-modules/yapf/default.nix
+++ b/pkgs/development/python-modules/yapf/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "yapf";
-  version = "0.20.1";
+  version = "0.20.2";
   name = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "bd19f246be7193ad2acdc04702b92315f1ae28d49c82f6671afdeefe9d32f468";
+    sha256 = "7f5efdb7edf0318b91e53721d934580a77153e24a222f52f6e1c3b7629aead43";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/python-modules/yarl/default.nix b/pkgs/development/python-modules/yarl/default.nix
index e40aa9d05f9c..1953b1610ceb 100644
--- a/pkgs/development/python-modules/yarl/default.nix
+++ b/pkgs/development/python-modules/yarl/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "yarl";
-  version = "1.1.0";
+  version = "1.1.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "162630v7f98l27h11msk9416lqwm2mpgxh4s636594nlbfs9by3a";
+    sha256 = "a69dd7e262cdb265ac7d5e929d55f2f3d07baaadd158c8f19caebf8dde08dfe8";
   };
 
   checkInputs = [ pytest pytestrunner ];
diff --git a/pkgs/development/python-modules/yolk/default.nix b/pkgs/development/python-modules/yolk/default.nix
index 5e8c412ce520..958fcd72f84a 100644
--- a/pkgs/development/python-modules/yolk/default.nix
+++ b/pkgs/development/python-modules/yolk/default.nix
@@ -17,7 +17,7 @@ buildPythonApplication rec {
   meta = {
     description = "Command-line tool for querying PyPI and Python packages installed on your system";
     homepage = https://github.com/cakebread/yolk;
-    maintainer = with maintainers; [ profpatsch ];
+    maintainer = with maintainers; [];
     license = licenses.bsd3;
   };
 }
diff --git a/pkgs/development/python-modules/zodbpickle/default.nix b/pkgs/development/python-modules/zodbpickle/default.nix
index 53dd8680c315..108f5395ece4 100644
--- a/pkgs/development/python-modules/zodbpickle/default.nix
+++ b/pkgs/development/python-modules/zodbpickle/default.nix
@@ -5,13 +5,13 @@
 
 buildPythonPackage rec {
   pname = "zodbpickle";
-  version = "0.7.0";
+  version = "1.0";
   name = "${pname}-${version}";
   disabled = isPyPy; # https://github.com/zopefoundation/zodbpickle/issues/10
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "95a247fb17bce980af8d548af70ac5bd1bad22773f242eb8efa24428efa909a8";
+    sha256 = "3af9169fb1d5901cf6693ab356b0dfda20ad2cacc5673fad59b4449ed50d5399";
   };
 
   # fails..
diff --git a/pkgs/development/qtcreator/default.nix b/pkgs/development/qtcreator/default.nix
index 0b3cf3b53f89..de94b7a8eff3 100644
--- a/pkgs/development/qtcreator/default.nix
+++ b/pkgs/development/qtcreator/default.nix
@@ -31,6 +31,11 @@ stdenv.mkDerivation rec {
 
   installFlags = [ "INSTALL_ROOT=$(out)" ] ++ optional withDocumentation "install_docs";
 
+  preConfigure = ''
+    substituteInPlace src/plugins/plugins.pro \
+      --replace '$$[QT_INSTALL_QML]/QtQuick/Controls' '${qtquickcontrols}/${qtbase.qtQmlPrefix}/QtQuick/Controls'
+  '';
+
   preBuild = optional withDocumentation ''
     ln -s ${getLib qtbase}/$qtDocPrefix $NIX_QT5_TMP/share
   '';
diff --git a/pkgs/development/r-modules/bioc-annotation-packages.nix b/pkgs/development/r-modules/bioc-annotation-packages.nix
index d623433593cd..6707dd1e3c73 100644
--- a/pkgs/development/r-modules/bioc-annotation-packages.nix
+++ b/pkgs/development/r-modules/bioc-annotation-packages.nix
@@ -4,8 +4,10 @@
 # Rscript generate-r-packages.R bioc-annotation >new && mv new bioc-annotation-packages.nix
 
 { self, derive }:
-let derive2 = derive { rVersion = "3.4"; };
+let derive2 = derive { biocVersion = "3.6"; };
 in with self; {
+  AHCytoBands = derive2 { name="AHCytoBands"; version="0.99.0"; sha256="0g92nz33rx14zl5can7s701bipdgz7rxqygvvc22c4a0qj52ijnq"; depends=[]; };
+  AHEnsDbs = derive2 { name="AHEnsDbs"; version="1.0.4"; sha256="0wchfmz3fl0vx7mmddh9s6sy04xvjh6nkw61yx1ddcdhzrwa45i7"; depends=[AnnotationHubData ensembldb]; };
   BSgenome_Alyrata_JGI_v1 = derive2 { name="BSgenome.Alyrata.JGI.v1"; version="1.0.0"; sha256="06549kkzy36n378zb61lrf9zardncp7i20r73rmmiq1pnfjp3gww"; depends=[BSgenome]; };
   BSgenome_Amellifera_BeeBase_assembly4 = derive2 { name="BSgenome.Amellifera.BeeBase.assembly4"; version="1.4.0"; sha256="02zs16q441zcbfp7xvv1gny5nn02ivfr8md1wh5s5rpnj6sdl6kj"; depends=[BSgenome]; };
   BSgenome_Amellifera_UCSC_apiMel2 = derive2 { name="BSgenome.Amellifera.UCSC.apiMel2"; version="1.4.0"; sha256="1967w7aly7qydykk7rar712kvgsav3zjr4kirybkj17nwiynd74g"; depends=[BSgenome]; };
@@ -95,13 +97,13 @@ in with self; {
   BSgenome_Vvinifera_URGI_IGGP8X = derive2 { name="BSgenome.Vvinifera.URGI.IGGP8X"; version="0.1"; sha256="0v0hi2pbbi5ynd92bvbv4bzr7bgv48kvyz62hdv7k9gh7s5pg0id"; depends=[BSgenome]; };
   ChemmineDrugs = derive2 { name="ChemmineDrugs"; version="1.0.0"; sha256="0h4jxcb6vkf9ijljas7yvcx6vmrd5rpjgj202cf2jb9hx8h9497i"; depends=[BiocGenerics ChemmineR RSQLite]; };
   DO_db = derive2 { name="DO.db"; version="2.9"; sha256="10bqqa124l61ivzy4mdd3z3ar9a6537qbxw23pc4y9w8a6dwnavn"; depends=[AnnotationDbi]; };
-  EnsDb_Hsapiens_v75 = derive2 { name="EnsDb.Hsapiens.v75"; version="2.1.0"; sha256="020vrkfjs7bwnz897l3x4fmc1bnzn3n1zpmv5mmnn8fm35qcrai8"; depends=[ensembldb]; };
-  EnsDb_Hsapiens_v79 = derive2 { name="EnsDb.Hsapiens.v79"; version="2.1.0"; sha256="1684sl2smmp2bdkfzv9v5f04100p4hqkfhn1m73pyppygkpak2hp"; depends=[ensembldb]; };
-  EnsDb_Hsapiens_v86 = derive2 { name="EnsDb.Hsapiens.v86"; version="2.1.0"; sha256="1xbvzl8abgcafzd3f8kaypq5b6lpa8j92m2skgsagn0mfpqwqk4s"; depends=[ensembldb]; };
-  EnsDb_Mmusculus_v75 = derive2 { name="EnsDb.Mmusculus.v75"; version="2.1.0"; sha256="0r6j0andx2mbrjk7wfhr4k8cwpll63i08m0073fik0cy08hy0f6l"; depends=[ensembldb]; };
-  EnsDb_Mmusculus_v79 = derive2 { name="EnsDb.Mmusculus.v79"; version="2.1.0"; sha256="12shvxcj8jjzn5mil6vfil4a9jnrfs41jlll4wypgs4iyb0m8f7g"; depends=[ensembldb]; };
-  EnsDb_Rnorvegicus_v75 = derive2 { name="EnsDb.Rnorvegicus.v75"; version="2.1.0"; sha256="1bdr417m0dk2qdkz4ydfzhl3q728c9vl8k5w84x4g8cqv0bv58lv"; depends=[ensembldb]; };
-  EnsDb_Rnorvegicus_v79 = derive2 { name="EnsDb.Rnorvegicus.v79"; version="2.1.0"; sha256="1nri32xkz764nnpxfh8hbp6c8f8xd565jl5hwhvn6ml2awjqxd83"; depends=[ensembldb]; };
+  EnsDb_Hsapiens_v75 = derive2 { name="EnsDb.Hsapiens.v75"; version="2.99.0"; sha256="0jx6rf6v0j8yr07q3c1h7s121901dc400nm6xaiv4i7kb5czjn9c"; depends=[ensembldb]; };
+  EnsDb_Hsapiens_v79 = derive2 { name="EnsDb.Hsapiens.v79"; version="2.99.0"; sha256="0k94iml0417m3k086d0bzd83fndyb2kn7pimsfzcdmafgy6sxwgg"; depends=[ensembldb]; };
+  EnsDb_Hsapiens_v86 = derive2 { name="EnsDb.Hsapiens.v86"; version="2.99.0"; sha256="1gp7xrzddpvmh2vrcp571wyy00skxgxfl39ksj4h0hm1qay0fb2m"; depends=[ensembldb]; };
+  EnsDb_Mmusculus_v75 = derive2 { name="EnsDb.Mmusculus.v75"; version="2.99.0"; sha256="00c92l6ii2p3hila8xpblmidx8pmy11x1xh4gnwsq3f3rn1q200g"; depends=[ensembldb]; };
+  EnsDb_Mmusculus_v79 = derive2 { name="EnsDb.Mmusculus.v79"; version="2.99.0"; sha256="1zpmq7v55if6q9r0h883q9k8l70ym20b01m9hxf121wb256rl9f7"; depends=[ensembldb]; };
+  EnsDb_Rnorvegicus_v75 = derive2 { name="EnsDb.Rnorvegicus.v75"; version="2.99.0"; sha256="02sx9l1p67ihkn0dfzbi08cpp8x4k2mjdqn7hvzfiaibsbqp70bb"; depends=[ensembldb]; };
+  EnsDb_Rnorvegicus_v79 = derive2 { name="EnsDb.Rnorvegicus.v79"; version="2.99.0"; sha256="1ki2hrn0a55f3ipxny0hpgl5ld9pjkhcwmvvqwwd99f3sqbxf3br"; depends=[ensembldb]; };
   FDb_FANTOM4_promoters_hg19 = derive2 { name="FDb.FANTOM4.promoters.hg19"; version="1.0.0"; sha256="04sn5x1r5fcbghzw6n1bvy0z8zyhrbk86wsqz1p5gk665vicz8rw"; depends=[AnnotationDbi Biostrings GenomicFeatures]; };
   FDb_InfiniumMethylation_hg18 = derive2 { name="FDb.InfiniumMethylation.hg18"; version="2.2.0"; sha256="0vwzqzj49imjdsn8ssiwqi7qic7rqw5pbsiinyxgy7y10fn2i42a"; depends=[AnnotationDbi Biostrings GenomicFeatures org_Hs_eg_db TxDb_Hsapiens_UCSC_hg18_knownGene]; };
   FDb_InfiniumMethylation_hg19 = derive2 { name="FDb.InfiniumMethylation.hg19"; version="2.2.0"; sha256="0gq90fvph6kgrpjb89nvzq6hl1k24swn19rgjh5g98l86mja6nk0"; depends=[AnnotationDbi Biostrings GenomicFeatures org_Hs_eg_db TxDb_Hsapiens_UCSC_hg19_knownGene]; };
@@ -109,7 +111,8 @@ in with self; {
   FDb_UCSC_snp137common_hg19 = derive2 { name="FDb.UCSC.snp137common.hg19"; version="1.0.0"; sha256="1q1r7rk29q0zlzxz6fvfy1kjfli6wxzvhvhhfnf3z4ksy5332q63"; depends=[AnnotationDbi GenomicFeatures]; };
   FDb_UCSC_tRNAs = derive2 { name="FDb.UCSC.tRNAs"; version="1.0.1"; sha256="1dymdalx9fzrplxyc0fd9faa4r5jimi7zyry9k65lyz1pabpkwqz"; depends=[AnnotationDbi GenomicFeatures]; };
   GGHumanMethCancerPanelv1_db = derive2 { name="GGHumanMethCancerPanelv1.db"; version="1.4.1"; sha256="0ag1pkbh4mx4aplfrrz1q4f4cl05mczq9pcsfkd1071qk51dcwvx"; depends=[AnnotationDbi AnnotationForge org_Hs_eg_db]; };
-  GO_db = derive2 { name="GO.db"; version="3.4.0"; sha256="02cj8kqi5w39jwcs8gp1dgj08sah262ppxnkz4h3qd0w191y8yyl"; depends=[AnnotationDbi]; };
+  GO_db = derive2 { name="GO.db"; version="3.5.0"; sha256="02d1mn1al3q7qvhx1ylrr3ar4w4iw0qyi5d89v2336rzwk9maq35"; depends=[AnnotationDbi]; };
+  GenomeInfoDbData = derive2 { name="GenomeInfoDbData"; version="1.0.0"; sha256="0xp8hyc4r3lz76i0x8r9lp74h2j8p7fcrn7nqmjhx5kn9bdp7fyp"; depends=[]; };
   Homo_sapiens = derive2 { name="Homo.sapiens"; version="1.3.1"; sha256="151vj7h5p1c8yd5swrchk46z469p135wk50hvkl0nhgndvy0jj01"; depends=[AnnotationDbi GenomicFeatures GO_db org_Hs_eg_db OrganismDbi TxDb_Hsapiens_UCSC_hg19_knownGene]; };
   Hs6UG171_db = derive2 { name="Hs6UG171.db"; version="3.2.3"; sha256="034aady3hy8j9bm7pbl8l8h0gcfnzmpyxg9l9s1ky0pj7ryzr93a"; depends=[AnnotationDbi org_Hs_eg_db]; };
   HsAgilentDesign026652_db = derive2 { name="HsAgilentDesign026652.db"; version="3.2.3"; sha256="0x6nxvzmc8k4qp382ca32y58awkxpg0b3kc7m1mz9iag6sq7c5vx"; depends=[AnnotationDbi org_Hs_eg_db]; };
@@ -121,111 +124,105 @@ in with self; {
   IlluminaHumanMethylation27k_db = derive2 { name="IlluminaHumanMethylation27k.db"; version="1.4.8"; sha256="0zw0n4a9v42ifmvw2hfzzvl8jz1d7f00ia59ljhcvvw9aj12q4zs"; depends=[AnnotationDbi org_Hs_eg_db]; };
   IlluminaHumanMethylation27kanno_ilmn12_hg19 = derive2 { name="IlluminaHumanMethylation27kanno.ilmn12.hg19"; version="0.6.0"; sha256="0idy6xn3x5c640d47q52na03s29pj4l38dpxy8q9mh6hy8g29vp3"; depends=[minfi]; };
   IlluminaHumanMethylation27kmanifest = derive2 { name="IlluminaHumanMethylation27kmanifest"; version="0.4.0"; sha256="1kvz6z7g61zdrc1i93wsk1zv5mwcswfkxkl114644q09djwbz1fx"; depends=[minfi]; };
-  IlluminaHumanMethylation450k_db = derive2 { name="IlluminaHumanMethylation450k.db"; version="2.0.9"; sha256="1zmm65qnm95w9c8z30c9vncca451npbhhnlkpkpp894svsakxziz"; depends=[AnnotationDbi org_Hs_eg_db]; };
   IlluminaHumanMethylation450kanno_ilmn12_hg19 = derive2 { name="IlluminaHumanMethylation450kanno.ilmn12.hg19"; version="0.6.0"; sha256="059vlxsx3p3fcnywwirahsc6mlk813zpqnbv0jsrag6x5bb8z6r4"; depends=[minfi]; };
   IlluminaHumanMethylation450kmanifest = derive2 { name="IlluminaHumanMethylation450kmanifest"; version="0.4.0"; sha256="0qx75xwifrbkqmbkd8dhf44c34ibmbivqh7y8rvgrsizmi5ybcj1"; depends=[minfi]; };
   IlluminaHumanMethylation450kprobe = derive2 { name="IlluminaHumanMethylation450kprobe"; version="2.0.6"; sha256="1iah0rw7d8qvgwvn6n2l4cln39ky010gqpd9shml45m48m6whiia"; depends=[AnnotationDbi]; };
   IlluminaHumanMethylationEPICanno_ilm10b2_hg19 = derive2 { name="IlluminaHumanMethylationEPICanno.ilm10b2.hg19"; version="0.6.0"; sha256="0sfdx0lpiw3l4passx93pjfswd0iv3hxdc7ciazh53baib3xpv2d"; depends=[minfi]; };
+  IlluminaHumanMethylationEPICanno_ilm10b3_hg19 = derive2 { name="IlluminaHumanMethylationEPICanno.ilm10b3.hg19"; version="0.6.0"; sha256="1rdkvbpbz8a8bd9ipycfmgn8a3x519abhwywka21ii9ziv3s6ah6"; depends=[minfi]; };
+  IlluminaHumanMethylationEPICanno_ilm10b4_hg19 = derive2 { name="IlluminaHumanMethylationEPICanno.ilm10b4.hg19"; version="0.6.0"; sha256="0687b4k8hwfc18qgdd9ypv1skp37jd204fszba0gmrv3dc92i09c"; depends=[minfi]; };
   IlluminaHumanMethylationEPICmanifest = derive2 { name="IlluminaHumanMethylationEPICmanifest"; version="0.3.0"; sha256="0alhjda5g186z8b1nsmnpfswrlj7prdz8mkwx60wkkl6hkcnk6p3"; depends=[minfi]; };
   JazaeriMetaData_db = derive2 { name="JazaeriMetaData.db"; version="3.2.3"; sha256="04lvcmm4ybxkfwgbiwcnpyj6kpbd0gd7jz6ijlbbvv6zdgdmvykb"; depends=[AnnotationDbi org_Hs_eg_db]; };
   KEGG_db = derive2 { name="KEGG.db"; version="3.2.3"; sha256="0qv9in1nmnqcbjxh0y45x33xyw9zdp4jf5hmlvcsh1pclcq4dsh2"; depends=[AnnotationDbi]; };
   LAPOINTE_db = derive2 { name="LAPOINTE.db"; version="3.2.3"; sha256="0960gy5p4ybs5zs6251cgc3nk5a9gsh1nh23gkbkr3gc8jddinfm"; depends=[AnnotationDbi org_Hs_eg_db]; };
   LowMACAAnnotation = derive2 { name="LowMACAAnnotation"; version="0.99.3"; sha256="0ri301ci54s8wwkah1jccy5h44xg8yjk08j5b15qmdsm25hli4wm"; depends=[]; };
   LymphoSeqDB = derive2 { name="LymphoSeqDB"; version="0.99.2"; sha256="1cdyn2imjh4zr23szndc4vwyiacxs1jsp14gil2dyq9aifa25qr7"; depends=[]; };
-  MafDb_1Kgenomes_phase1_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase1.hs37d5"; version="3.4.0"; sha256="180z52y03gdkf36ycr76vcs1mz9qdbwywzxrbcj6yb5vcj8i5hdx"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; };
-  MafDb_1Kgenomes_phase3_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase3.hs37d5"; version="3.4.0"; sha256="10968v506gmhzrnjz92z2p4484dbhgs6a20lkhs6f79bl66ckdbj"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; };
-  MafDb_ESP6500SI_V2_SSA137 = derive2 { name="MafDb.ESP6500SI.V2.SSA137"; version="3.4.0"; sha256="1s5vqp3fnkswiv2slsh0wkd286psdhqcwvchcjq3gm4hq86h4pwh"; depends=[AnnotationDbi Biobase Biostrings GenomicRanges IRanges Rsamtools RSQLite VariantAnnotation VariantFiltering]; };
-  MafDb_ESP6500SI_V2_SSA137_GRCh38 = derive2 { name="MafDb.ESP6500SI.V2.SSA137.GRCh38"; version="3.4.0"; sha256="1qaqqkshvrf7y6lwnnh8n47zvb35vn23l8vmvm29przz8y2xz22v"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; };
-  MafDb_ESP6500SI_V2_SSA137_hs37d5 = derive2 { name="MafDb.ESP6500SI.V2.SSA137.hs37d5"; version="3.4.0"; sha256="0gxj4nghd99r6ivgzvs86gl8j1frr8laira4gld0vmfp0a4iv5fy"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; };
-  MafDb_ExAC_r0_3_1_nonTCGA_snvs_hs37d5 = derive2 { name="MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5"; version="3.4.0"; sha256="060750f8zz3gasgnq6smzq7f68nd9jh12wb8gpivc3xklx7gcrk9"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; };
-  MafDb_ExAC_r0_3_1_snvs_hs37d5 = derive2 { name="MafDb.ExAC.r0.3.1.snvs.hs37d5"; version="3.4.0"; sha256="0kq7c2zqzm0g4mbdzqgxq5bklsr2n0cm8x97gn3cfbf61y96ngqw"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; };
-  MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.7.0"; sha256="16h0yvjmrp8x5a0gqzpd9zc2f7q89pr1jsqqwxa44i8hqrgan0zp"; depends=[MeSHDbi]; };
-  MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.7.0"; sha256="04wqdv5z7r2lv49711k0z6vs408yyp96vnsmvyjh15m2bx3bbp3s"; depends=[MeSHDbi]; };
-  MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.7.0"; sha256="1k7kx59k9q6hd2svxi233bgq06h3wd6ahcm5lyy2i0br5crysbir"; depends=[MeSHDbi]; };
-  MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.7.0"; sha256="08wi41vxxb5ssbgz019dq5n4li0vfnv737iaavmy07hymh6js9v8"; depends=[MeSHDbi]; };
-  MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.7.0"; sha256="0l0a60mv7s08aflgra3ynkpr455953fr6lxv67xwkjag8k14gsi1"; depends=[MeSHDbi]; };
-  MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.7.0"; sha256="0ix24hj6g3n44g5g4f22dv84q3w6k588san83048x7w946774jf5"; depends=[MeSHDbi]; };
-  MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.7.0"; sha256="1dagpmrwmsgb8hylc69wic3qfl0cfs0qp9ib32w6qv9y71zg4i1c"; depends=[MeSHDbi]; };
-  MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.7.0"; sha256="02dhvpzacq6v785q4r5r5d6sm0wzqrgm1k7ajn7h3y8v3gjyymap"; depends=[MeSHDbi]; };
-  MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.7.0"; sha256="1sv8g45lay1fijlnryza8nz3hf1r2lvcclf3kd1x6iw6fi0yn4q2"; depends=[MeSHDbi]; };
-  MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.7.0"; sha256="16xkz7cbg64rcgv82baxvxnyy5gg16l9cl97xdlk4wvzkyp944hy"; depends=[MeSHDbi]; };
-  MeSH_Bsu_TUB10_eg_db = derive2 { name="MeSH.Bsu.TUB10.eg.db"; version="1.7.0"; sha256="1d7i7q78fdnr73a0qdpcwb28jk5gj77af4vyz708gw1803l35gb1"; depends=[MeSHDbi]; };
-  MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.7.0"; sha256="0lbq02vslnv1gj01ill14hf15mncqbwx7p872c8whvdkziwrvki8"; depends=[MeSHDbi]; };
-  MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.7.0"; sha256="12nfjk5qndfrg4p11nfy392nzsrgd196qrxiqx36vffbindpmykd"; depends=[MeSHDbi]; };
-  MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.7.0"; sha256="128hslq3vs4psp64vi6vj84za2kbh0jwlc20j2ivnjkrr30fsb2h"; depends=[MeSHDbi]; };
-  MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.7.0"; sha256="1x5l0p0iiwqg7ci7nirwcsarg33b43clrbvr2cf20rxhc1valmpz"; depends=[MeSHDbi]; };
-  MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.7.0"; sha256="1y87i8x6ismji8y6i6yibz5zacf4486dkzmmxggy6ly80lisklb2"; depends=[MeSHDbi]; };
-  MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.7.0"; sha256="05mn2a7fb3zcfzqwl60zp946xyp0kdr5ld7nxh79yxwglhb2r6v0"; depends=[MeSHDbi]; };
-  MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.7.0"; sha256="0hii578hva5aa388zkiarm07w437ccci3qpskd8nl0qyj1xmpb72"; depends=[MeSHDbi]; };
-  MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.7.0"; sha256="1nm83ydgfzb43agra99sp10a513fn69yzxg430f0qdwaw564c85y"; depends=[MeSHDbi]; };
-  MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.7.0"; sha256="1gnvf3qm17xa1q0szb4gqnslws6g026x79hmjg7fnkcyn6faxgy9"; depends=[MeSHDbi]; };
-  MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.7.0"; sha256="0qnj09hpnmpxwj448wl4vdpzzmdm1w9m4gq3r2pak30fp5l2mv9i"; depends=[MeSHDbi]; };
-  MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.7.0"; sha256="14z8gbnj6jjh2v76qqpikylaz781gfag6r199hkq20pfph10hld7"; depends=[MeSHDbi]; };
-  MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.7.0"; sha256="0114vi0k57nv6pxq74c4h38b4yavs74vzidm8gg0pws2pxk8grah"; depends=[MeSHDbi]; };
-  MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.7.0"; sha256="0ia2xp2bl6bb497gscqbxyd9kd33bynhyg5avvyfddkhpnljv5dx"; depends=[MeSHDbi]; };
-  MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.7.0"; sha256="0rgjng9g69kwhh01kww5mahwbikiyc8qgzh363j2m7piqmsc5siy"; depends=[MeSHDbi]; };
-  MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.7.0"; sha256="0m4n7wfxxgw5i9zpcss25x1n47bpshvca03cigfmxaqvh3lagf2n"; depends=[MeSHDbi]; };
-  MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.7.0"; sha256="1hchnrhgvk18cs8hzg7dvf2fqrpk7fqgarkp23h325clrrh243l0"; depends=[MeSHDbi]; };
-  MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.7.0"; sha256="19bpjyxja7clnyvhcwfv939z1xplxj5naz4vpchs555arzx0c2m4"; depends=[MeSHDbi]; };
-  MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.7.0"; sha256="1njf3r6dfcvs2734mdsb3zlpkqgip9nnmmaxfz7wy3fqhn2ddyqa"; depends=[MeSHDbi]; };
-  MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.7.0"; sha256="0i66f7g4zfz44gnrqgl7mw0k7kadj6pmsqkk62ik2af783y9cv0r"; depends=[MeSHDbi]; };
-  MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.7.0"; sha256="10ndr1g76d955gii8m91l5nfvxxim3k7b5fk9r7d8fnzwagjnpij"; depends=[MeSHDbi]; };
-  MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.7.0"; sha256="1nwig8czz65cfrq1mw62h85wh9wch69b5i12iry85x1567q7sfbv"; depends=[MeSHDbi]; };
-  MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.7.0"; sha256="1f93fnclsp6zmza6blwkfj5ncmxs8ihjqxr9dh8xjqciyb7wfmw5"; depends=[MeSHDbi]; };
-  MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.7.0"; sha256="0328rxhmhhmspylzx7sdmk3mlbx9hndmpfc3fkrdr2n9a8zirlwp"; depends=[MeSHDbi]; };
-  MeSH_Eco_CFT073_eg_db = derive2 { name="MeSH.Eco.CFT073.eg.db"; version="1.4.0"; sha256="0r7hlxd5k9n9shq3wj5ldqj00apvx4bv8h38v2i4adv29s5x7973"; depends=[MeSHDbi]; };
-  MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.7.0"; sha256="0x6sn0zhqm5gcd9is5ka5hg24kvlyk3qc4pnyjmc88cgfz90cqqq"; depends=[MeSHDbi]; };
-  MeSH_Eco_HS_eg_db = derive2 { name="MeSH.Eco.HS.eg.db"; version="1.4.0"; sha256="0gyrfjyp3k5jbcg92qzz4fjpmk9m4i0v7q2yvja73sni6976g9ca"; depends=[MeSHDbi]; };
-  MeSH_Eco_IAI1_eg_db = derive2 { name="MeSH.Eco.IAI1.eg.db"; version="1.4.0"; sha256="16mxh182ij25qgfk14dzzpvaac7fqcnzx58j5m6hfrz3wvgh9jrq"; depends=[MeSHDbi]; };
-  MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.7.0"; sha256="1ahln8fad45mvrg6scdaz1ilvj9wnb5mxww9jvzm33d1ik04j5sj"; depends=[MeSHDbi]; };
-  MeSH_Eco_K12_DH10B_eg_db = derive2 { name="MeSH.Eco.K12.DH10B.eg.db"; version="1.4.0"; sha256="00y5qlqrsjl941iaqln4m5jvskc2a6kildys881ml92f14cmgs07"; depends=[MeSHDbi]; };
-  MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.7.0"; sha256="0vdb038i7pj7bcnnn3rf22bj3knnx4vj1dpwijivh6w9gxfkqd4p"; depends=[MeSHDbi]; };
-  MeSH_Eco_O127_H6_E2348_69_eg_db = derive2 { name="MeSH.Eco.O127.H6.E2348.69.eg.db"; version="1.4.0"; sha256="1as23bz0yylgf24sy84xm46bblvkacp84kjr2g8c9if1vll2x2dg"; depends=[MeSHDbi]; };
-  MeSH_Eco_O157_H7_EDL933_eg_db = derive2 { name="MeSH.Eco.O157.H7.EDL933.eg.db"; version="1.4.0"; sha256="0qnnp2a2v3nv1br1lg2km0p96q1knwa1fx95cg4wp38nc5g0jcc9"; depends=[MeSHDbi]; };
-  MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.7.0"; sha256="02j5gi0199z9g6ghc4rsq7h9b5sigrq1a06hhl7rdm4bpa2sy8p1"; depends=[MeSHDbi]; };
-  MeSH_Eco_S88_eg_db = derive2 { name="MeSH.Eco.S88.eg.db"; version="1.4.0"; sha256="15k44ricv7vi7sbw5s2nckm6jwbfzrrjp8ck06ydjp9q70hfzmhy"; depends=[MeSHDbi]; };
-  MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.7.0"; sha256="0nv4w38w9s53jqv3zin3m61skl2gr27iizhqvrp961wy5kqyqwmj"; depends=[MeSHDbi]; };
-  MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.7.0"; sha256="1kdv46yjw9dw1ksw1f59gn51gl1vkp8xgk1bwl7fjk9ap7pgc924"; depends=[MeSHDbi]; };
-  MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.7.0"; sha256="07ng6pri1666sv9hznxx8whk8wkj8mm969w3dlgi633fp9qsg507"; depends=[MeSHDbi]; };
-  MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.7.0"; sha256="0sb4nab0fibbhms8h8izwxzdwdg450klnlnczksjka5rccl8na7l"; depends=[MeSHDbi]; };
-  MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.7.0"; sha256="02mchzw2jc615g7xd9gb42vsjjyfpz8i6p36mrd0y4nr7mskxmr0"; depends=[MeSHDbi]; };
-  MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.7.0"; sha256="10sl8qisbf8m49j2fvwbwhhp2w964gfnm8j273sy6ma1rdcj1df0"; depends=[MeSHDbi]; };
-  MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.7.0"; sha256="195g835jsswc9v1c0ycp4s1rgcfnwbramgk9vfrlwwiqis7yw358"; depends=[MeSHDbi]; };
-  MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.7.0"; sha256="162rg0y1x1nr61vdzdv51ps4ilvybw6z2899xcchbvvpdgd2cxbz"; depends=[MeSHDbi]; };
-  MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.7.0"; sha256="1mj2p780nf8wnid2c2gkjrsbhrm8jyng03wa0wy83hs0gi38zp8k"; depends=[MeSHDbi]; };
-  MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.7.0"; sha256="076wrm9g3ppijpsq7ggcl3ld9nrm0vh87g5wspc760fjd0xy2pgn"; depends=[MeSHDbi]; };
-  MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.7.0"; sha256="0nzm1rl1qf2impsjns3cbp45kl4ld1a8icb3ip85r2hg2js85ifa"; depends=[MeSHDbi]; };
-  MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.7.0"; sha256="0v30ia3wdicx38a4qaqafz5xblvdhpwzlxxdxka941v364dqvjvi"; depends=[MeSHDbi]; };
-  MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.7.0"; sha256="0j7l3w697jbf8wx2shnvs5hirpck0cwa7ik298gsjm9d5hwmjkwa"; depends=[MeSHDbi]; };
-  MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.7.0"; sha256="0nssphb6qs81i0hay1lmyvvvsj055rxwr21p46x4zlrqy01m9qxq"; depends=[MeSHDbi]; };
-  MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.7.0"; sha256="0pn9hhs4h9i49kw64xc4rb25gfvrn72swncvhw33pbw5kdav3mmi"; depends=[MeSHDbi]; };
-  MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.7.0"; sha256="1mw04y6vdma7q8i456qbjga4ikswsrbg4r7l9k9dyq37rh53fqhj"; depends=[MeSHDbi]; };
-  MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.7.0"; sha256="16b5wgr5wfhrv64za39k9kkqg1drscvnf1s98jw7inrlk3hc7cx3"; depends=[MeSHDbi]; };
-  MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.7.0"; sha256="0g2czpb0d47yrq161fzvkmra5gmv7vqjllrhxd6v8vc65kmjkcjb"; depends=[MeSHDbi]; };
-  MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.7.0"; sha256="15k2ymcn65hwjmp47azf7wn7b8d1mb8g6b9wxrpv2jw7cazr14j2"; depends=[MeSHDbi]; };
-  MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.7.0"; sha256="04yw89mswnpi52hz1fa4y0ds5lykhwbwlgf52fyjhcbjw43ldais"; depends=[MeSHDbi]; };
-  MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.7.0"; sha256="09g0cgcbgyj59irvifqzbym9pyij3g4sqk95njd6xnlq57rw1awi"; depends=[MeSHDbi]; };
-  MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.7.0"; sha256="09yrm1skqvbs6jfn5a6s2ky7ij2b5nvs0p3vbjcv3pfh60n0zxdl"; depends=[MeSHDbi]; };
-  MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.7.0"; sha256="0h4g20ndpbrasaxml6in3wff6ckl5dy3h7wli9zamvrljzh0qdza"; depends=[MeSHDbi]; };
-  MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.7.0"; sha256="1ny0pqj05rz005fhi3nawixk0rj0jdnyd737359vbph79s82h4n5"; depends=[MeSHDbi]; };
-  MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.7.0"; sha256="0p62h8i0fx5vxac0xk54laibgsgmnpavpi5d6brjrddvxa4yqvx7"; depends=[MeSHDbi]; };
-  MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.7.0"; sha256="10f6kxzdgpidig3jc8wfgkan5yx1c8brxnf6w2y62ba3nq5nhj1j"; depends=[MeSHDbi]; };
-  MeSH_Sau_USA300TCH1516_eg_db = derive2 { name="MeSH.Sau.USA300TCH1516.eg.db"; version="1.4.0"; sha256="109kvsdqvra8x392l82djbd46l8z4hv4z92785ivgdcnchsdjq7p"; depends=[MeSHDbi]; };
-  MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.7.0"; sha256="09df9issnh9adhwb5z6rxzll8d8gqpvg812p0xny7zx598hvjbyh"; depends=[MeSHDbi]; };
-  MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.7.0"; sha256="047v0h1jrxacw33hd2iclrwzi441s60aq107ynzh549066r44l26"; depends=[MeSHDbi]; };
-  MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.7.0"; sha256="19a6sq9yzc7q7515x7wxjdr74r3xxagfinzwgxvb13j2pcxl72qr"; depends=[MeSHDbi]; };
-  MeSH_Spo_972h_eg_db = derive2 { name="MeSH.Spo.972h.eg.db"; version="1.7.0"; sha256="01m12jm4wwkdh9zkajl1fh9193pkys23m33q0zxahvqaknainv3b"; depends=[MeSHDbi]; };
-  MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.7.0"; sha256="08991vxjyqxybi91msicrxdxi60js6gynnhkxdybhcdn0rq3q03b"; depends=[MeSHDbi]; };
-  MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.7.0"; sha256="188jk2yx2xkyd9nr55jx0w2ki6fk5a10hc39zzs8c7ilb6azj973"; depends=[MeSHDbi]; };
-  MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.7.0"; sha256="0csch7hs1hvabrhpvm8hwv35iqhllisf3xr9j5b3lhysdxm9awha"; depends=[MeSHDbi]; };
-  MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.7.0"; sha256="1qr5d4zf6778bqrmxynjzl0hjvfgfbk42wldw6c40cqa51caav5x"; depends=[MeSHDbi]; };
-  MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.7.0"; sha256="1cwb68y7sn8gnhwcm05dry9aaq2jjphvwfnl5yh0fddw7x31nsc6"; depends=[MeSHDbi]; };
-  MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.7.0"; sha256="0dbpxc3syrw5s59cwl36skzi9d5j557aacq0j5kcwahy8abb1pk9"; depends=[MeSHDbi]; };
-  MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.7.0"; sha256="06fckdyfrwdh3ijz6bcikr4fsd69adlcjb54brwqqaak14lf06w4"; depends=[MeSHDbi]; };
-  MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.7.0"; sha256="1wxh3lhbc8cy040dhkwjckxc2q6laxb8wrvzd1lg72vijzsnyvlg"; depends=[MeSHDbi]; };
-  MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.7.0"; sha256="1fz9l962w0mi8a6ch54xa4qn5v7kkva21n7q68yd4d4irm51dcac"; depends=[MeSHDbi]; };
-  MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.7.0"; sha256="0pfx33qs6m5m5i85ib8agbdg58w8g0af188rl0jdyxrfkbfaj9v9"; depends=[MeSHDbi]; };
-  MeSH_db = derive2 { name="MeSH.db"; version="1.7.0"; sha256="0zinr1wbbw3q05zcaq5xaqn0gqx9z9rdhdc89g1pj6f13mhs7zz3"; depends=[MeSHDbi]; };
+  MafDb_1Kgenomes_phase1_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase1.hs37d5"; version="3.6.0"; sha256="19y1w2nk3xj4xkg46vhmfk045j8cg81x9a27irmgl2ym3pmcpn92"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MafDb_1Kgenomes_phase3_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase3.hs37d5"; version="3.6.0"; sha256="02bwgqh4mx9yfsyr6cxglncdybkxq9rc0gir3919sjs2my3pa0yq"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MafDb_ESP6500SI_V2_SSA137_GRCh38 = derive2 { name="MafDb.ESP6500SI.V2.SSA137.GRCh38"; version="3.6.0"; sha256="07spwx7akc7i82s8il6mjkmyll07v2slkv6h6fy1rrsa0hrdrw8w"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MafDb_ESP6500SI_V2_SSA137_hs37d5 = derive2 { name="MafDb.ESP6500SI.V2.SSA137.hs37d5"; version="3.6.0"; sha256="1gr9gh355h1n426rwsr44wk4fgy0bvjfyaai2jj0qnp9zb94kr42"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MafDb_ExAC_r1_0_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.hs37d5"; version="3.6.0"; sha256="1a2x86cdl6q3s9phb6dzblld4y43r10gh7323c5jnwiyirhs4hlc"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MafDb_ExAC_r1_0_nonTCGA_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.nonTCGA.hs37d5"; version="3.6.0"; sha256="1zyp1hsqdcspnvlnqm3wp9xly8r6kjbglbdqsc8fxllivdzxs15f"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MafDb_TOPMed_freeze5_hg38 = derive2 { name="MafDb.TOPMed.freeze5.hg38"; version="3.6.0"; sha256="02hq5agpbqcc5cva6xa37kniwi0fi7h5d4cbpmlwfc502n0ahlx0"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MafDb_gnomAD_r2_0_1_hs37d5 = derive2 { name="MafDb.gnomAD.r2.0.1.hs37d5"; version="3.6.0"; sha256="0fjpm1lf8qz5vfd4k2sd50a0nkxx8jlf31c1xp87a2d5v7gyx9d4"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MafDb_gnomADex_r2_0_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.0.1.hs37d5"; version="3.6.0"; sha256="1jrzj9mw8xqxmw4qq9djs1f5slvd5l7151pcg9bqzj0162zcz8jb"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; };
+  MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.9.0"; sha256="0vlvfwr9bi229xwdjymclj0z2spxx8q96hpkgvqyndfpqchapl5q"; depends=[MeSHDbi]; };
+  MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.9.0"; sha256="1cx2yzx67fgqi0kmf1mk3ykvmqmprilxrjg6l51srjhi40p9q1wg"; depends=[MeSHDbi]; };
+  MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.9.0"; sha256="1gy4l1p0980blf91f57sxnn38gfyq99lmy3sfc141nm435abdh2l"; depends=[MeSHDbi]; };
+  MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.9.0"; sha256="1z2y8mdjyjclf0lqlhi9dq9gq8cqrm8m2m0rnyqgbadsxviwg447"; depends=[MeSHDbi]; };
+  MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.9.0"; sha256="15393b8pyh8xclbi43q3iv6lvza7az7zyc2zcmj2wnqx8x9nn50p"; depends=[MeSHDbi]; };
+  MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.9.0"; sha256="0r1q383f5p92f238m7w0gxalfr8w638ij4dj8zm1b20qakwb8bk6"; depends=[MeSHDbi]; };
+  MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.9.0"; sha256="1fv6hfqx562qiy87h7bjym72ffygfgdfx0miwbnwd1wblbrs4m23"; depends=[MeSHDbi]; };
+  MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.9.0"; sha256="0m78hqfcpnfbq7dm28l24ckhz91sbq3mgi0qdkn6l69rg19l5xwr"; depends=[MeSHDbi]; };
+  MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.9.0"; sha256="1s180b36nz4g7w2c49c4dddz4362ps45fjbs8q07s8d5r826wil0"; depends=[MeSHDbi]; };
+  MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.9.0"; sha256="0s0bskw9y5gbf80xf7sh43csa8mwi0h4ka2dai6jm763jdal645s"; depends=[MeSHDbi]; };
+  MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.9.0"; sha256="1nfy0fa7jnlsq823jq1im6zimnanqx6hc4z9sa2mhpn8yw3hrzcy"; depends=[MeSHDbi]; };
+  MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.9.0"; sha256="111q80xyfnz9p8230wnm0xkam2p25drbcb2nyr68lpz3l02m9c72"; depends=[MeSHDbi]; };
+  MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.9.0"; sha256="0xpm52xshhjw0lazfz9zhk3wiqas88aabin58iqykbyivnaxgiw8"; depends=[MeSHDbi]; };
+  MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.9.0"; sha256="1ni1w608mr28fapxhxj5icf1yjq6wrnqfhxc8bf5q5qqpnb34k16"; depends=[MeSHDbi]; };
+  MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.9.0"; sha256="0c1rxpsavj4j9sndr2bigyxsdg7hm3ckbk2rai2gz125vwlfy9ll"; depends=[MeSHDbi]; };
+  MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.9.0"; sha256="10zxx8hpd72dad1ais9qr1ahkrqygmrzj2zph8n7zwvcys3mqqqg"; depends=[MeSHDbi]; };
+  MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.9.0"; sha256="0g8dafmjls4lafbg3a484iym0df173szvnzfqz272sh32a69ikgb"; depends=[MeSHDbi]; };
+  MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.9.0"; sha256="0r4yrxflppzf21zfiyq1hxsjjgm7a3akj18qly8576nl94py0h16"; depends=[MeSHDbi]; };
+  MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.9.0"; sha256="1aicx7f7mpawq9mbrdkpach2n8yz2isqfqxcqx355js8csdnai6y"; depends=[MeSHDbi]; };
+  MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.9.0"; sha256="1d829frcmx9h0yn4dk2ddhqjjf4kz6n0c8nag31n5viaj0jrxhz9"; depends=[MeSHDbi]; };
+  MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.9.0"; sha256="0zx7s0xbqxl2xs1xhv5q3ppr33zfyjs4c5cmfp904k21fp1gyxk0"; depends=[MeSHDbi]; };
+  MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.9.0"; sha256="1sahvwvh29m2icqi3l4ain817cmlajklmc6w32ay5ydbxdl2k2aq"; depends=[MeSHDbi]; };
+  MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.9.0"; sha256="0g8z6cdz5wad9fhzd0f7p7961kjv1icfwxfskgimrb0dqn0vwngz"; depends=[MeSHDbi]; };
+  MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.9.0"; sha256="1g68dv597h62kidkaxmyj67jpz49aklr77hf0zy0n556whb0gjw0"; depends=[MeSHDbi]; };
+  MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.9.0"; sha256="18r1mfmszsypp6iwdfcdlxzbz2ym53q160y5740d20nf18jwdkyl"; depends=[MeSHDbi]; };
+  MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.9.0"; sha256="09r83x7c3ascv5k10izbsybbchng578f88cqcc34a71h01ccvbgl"; depends=[MeSHDbi]; };
+  MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.9.0"; sha256="0c6yi84drl1kp270ifhkha6s5555pmx122r3zsh5lqip4pf36ik0"; depends=[MeSHDbi]; };
+  MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.9.0"; sha256="0za05dgsy67sl1rg827mn4iir2fcwqgnmmifppdkmg5bcqvh3sli"; depends=[MeSHDbi]; };
+  MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.9.0"; sha256="1m8vszsdql5vnbavrdazrf0d88nq8c08bz9fggr1799fmh9ivppi"; depends=[MeSHDbi]; };
+  MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.9.0"; sha256="1sjm22yl4a9lwv6j5hhs16zs39fv9xvaga2bgb55rv6i1zbw514v"; depends=[MeSHDbi]; };
+  MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.9.0"; sha256="0lll6xsxccxg04nnbchkq3rskzqj70czky27yhn99dpnb7cl2gpk"; depends=[MeSHDbi]; };
+  MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.9.0"; sha256="0fny3nxwpihh505h54b82bf22p74xhf89xns9n7wgsg6j7zr1q49"; depends=[MeSHDbi]; };
+  MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.9.0"; sha256="0jklkvqwajnprs951ws5fxjxkx1dqmi7nldb854wciyanya7srbz"; depends=[MeSHDbi]; };
+  MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.9.0"; sha256="0gmjpbqcrg700fi4qgg9cxny8rwclpg9sbrg2yqpnpiwfp3m1xp9"; depends=[MeSHDbi]; };
+  MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.9.0"; sha256="126xn0dgw08xdjw0sqm80v3pwqlmjzarifq1s3s81qkd814pij2y"; depends=[MeSHDbi]; };
+  MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.9.0"; sha256="1zfq3h886x9kyislnl4mj6ksfmr4slmayw2f63wp3vhlqc8xlp6m"; depends=[MeSHDbi]; };
+  MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.9.0"; sha256="18n2aajv2m1s3y13w88jnxiwzmmqiplmp2la1fh6f34ywsc8vcf2"; depends=[MeSHDbi]; };
+  MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.9.0"; sha256="1qhw2zbldsxr9mii73n5l2l3xgnnmfcdm5zlnj8q6maz0rg8npvc"; depends=[MeSHDbi]; };
+  MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.9.0"; sha256="0siyszvzgy61f44mk6hgg215jin92i1bpyld932f3ydkb2cg1vii"; depends=[MeSHDbi]; };
+  MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.9.0"; sha256="1r5ighzpbw3rbi9pv75xgdxz34yl7d4nimc3423fva6m25bl14f1"; depends=[MeSHDbi]; };
+  MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.9.0"; sha256="0m3f9vkl97drciv68qvb6b1zxg4376sgrxd5fn7r8v6jnk3764h6"; depends=[MeSHDbi]; };
+  MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.9.0"; sha256="0kbf04jgy9sdq99x7c3j6fk1d1p746sm5h0wgcc496hmj9f3d7xq"; depends=[MeSHDbi]; };
+  MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.9.0"; sha256="1s96nh30gg3q6agvd75h8wkmsna753wlhh79fb563plkhynila3j"; depends=[MeSHDbi]; };
+  MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.9.0"; sha256="0f49mvvrigq06m6wsf2bn5b2k06c5azfnzks8z8h91h7p1cdn239"; depends=[MeSHDbi]; };
+  MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.9.0"; sha256="1nlqqgwcaic49lr7qknm4fnr28iy5a5g8pln9ay5c94d82ihaanj"; depends=[MeSHDbi]; };
+  MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.9.0"; sha256="0s8hfixk8axy155rhv9frnvdannm7fwv8xbnn4yqrqz97s0w3l8x"; depends=[MeSHDbi]; };
+  MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.9.0"; sha256="0kc1zv1rlw6sg72z5if2ljyyb99nn9jj67z0x77zpjil15igjq0f"; depends=[MeSHDbi]; };
+  MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.9.0"; sha256="07n81wg4g7r554xs4ziv637mz22ycmn5h03v2a1bl4gfagmp2wga"; depends=[MeSHDbi]; };
+  MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.9.0"; sha256="1sss6f5c039vic2kbxf5zchxx6qqdpysbwfb04xqn7vb0h5xs9aa"; depends=[MeSHDbi]; };
+  MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.9.0"; sha256="1lmy5rqpsxrmcc1zshj2dygdyrw5i95bmp9d31686h2pf7rxjxa7"; depends=[MeSHDbi]; };
+  MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.9.0"; sha256="1j892b88xpf1lcz6lv7n0b2lmqda3j6na6lm18qrmnydvihsrglz"; depends=[MeSHDbi]; };
+  MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.9.0"; sha256="0mnyhj6cfzgar0rsfzza9vydh3kiimyix732zm80gsj7xq844hs4"; depends=[MeSHDbi]; };
+  MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.9.0"; sha256="1gmlg22jdspcv6056iax16hk6vry739s7px1c0vpgmsblj8blzjv"; depends=[MeSHDbi]; };
+  MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.9.0"; sha256="05qsamqm7dimvghka10z03shchx08gxaf7bv488djia9msw04l3w"; depends=[MeSHDbi]; };
+  MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.9.0"; sha256="0h0027wgxm5ngk7087hcw1n2xx04q0sgfcpgmv2wn3f88mh42r9l"; depends=[MeSHDbi]; };
+  MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.9.0"; sha256="1cgbalyamgf1aj48ndhby8x3mzdwn8aiv9nrh8mpyz9zssl0ywdm"; depends=[MeSHDbi]; };
+  MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.9.0"; sha256="0wwnjqc0rvymh9fzh8l9hnlmaymchp54v9fqavxl3cwr2jjyyxis"; depends=[MeSHDbi]; };
+  MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.9.0"; sha256="0s869r4pz02d9k4dcg7qxy75h44x6lli8hxm3f9fjmmvv6cv18zs"; depends=[MeSHDbi]; };
+  MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.9.0"; sha256="07krh3k6d1q9dadphs07sapyv3dfmlhdmgcfrrramixx7paqqd1a"; depends=[MeSHDbi]; };
+  MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.9.0"; sha256="03bs083cvgd5gwy0n2hqq08r8fzw426a4fjx7yg9ypp6316bp03b"; depends=[MeSHDbi]; };
+  MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.9.0"; sha256="0snydy5c7y0437qndc7ki3nswbr3jfj2fssdiqa3yfrbd4dgl8fs"; depends=[MeSHDbi]; };
+  MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.9.0"; sha256="1g6q20hk4v2kwjj9shrwyrf068qv8zrz4dlv58id1im0h6kzi1bq"; depends=[MeSHDbi]; };
+  MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.9.0"; sha256="0wdwy7jqy47flyk25fv51l2acg7lisf240sli9snf0hl4rg2m8sh"; depends=[MeSHDbi]; };
+  MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.9.0"; sha256="193amf74qwglzdpgc4b9f2g0jxs2s5ilfwzk5gpzzsyr6z19m8sx"; depends=[MeSHDbi]; };
+  MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.9.0"; sha256="1wpl49hsz2la272mp836cgqnncyddknrfbfalikwrbydcpdflmqj"; depends=[MeSHDbi]; };
+  MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.9.0"; sha256="0x1s4qs17sy7pz1bhlgfzgvixf50h4wcpa885600f5jv80piz10w"; depends=[MeSHDbi]; };
+  MeSH_Spo_972h_eg_db = derive2 { name="MeSH.Spo.972h.eg.db"; version="1.9.0"; sha256="0959hmphr884az46y6zvsmi28vsz66y3jf09f2hki6cwg7gp28l2"; depends=[MeSHDbi]; };
+  MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.9.0"; sha256="1fdwj5dpfpm8cbq5i1wk3n5qq0ygw876shpxiqlj7i7a8yrnikqg"; depends=[MeSHDbi]; };
+  MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.9.0"; sha256="1mrmxpi4zkj77qnr5gsx7nnmhz3h7w07mji0khahd1cnkdqb455g"; depends=[MeSHDbi]; };
+  MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.9.0"; sha256="04wrimmnwhzqhk88jp059h5wpj0wh35ilgzfmn7m66igbiywsyiq"; depends=[MeSHDbi]; };
+  MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.9.0"; sha256="1wida7bmggiamd8bw7sx3sc84rjhpa6c7kgbz7ppf5z5zzabxwj8"; depends=[MeSHDbi]; };
+  MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.9.0"; sha256="0s7792dcgh5ilanr4nnkfcf95j4yndsncr63ybw8g5kp14qw3b6i"; depends=[MeSHDbi]; };
+  MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.9.0"; sha256="19g80bjw7h0f4w3mlrj56xmsdf46bjvs2bykf7hbz911qblkmd08"; depends=[MeSHDbi]; };
+  MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.9.0"; sha256="0x5amvf092r97zkzivsks99q4iaw9cnwpk2mjq8qjfrj2fg9mghc"; depends=[MeSHDbi]; };
+  MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.9.0"; sha256="0h2kndx4xva57hhapzkwnk4by05vpcrgqakc5cpil11in9wwm4gw"; depends=[MeSHDbi]; };
+  MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.9.0"; sha256="11gssp2rm9jln3bhallxhscn1vlp62yv1dqsshswzhda230pwsk8"; depends=[MeSHDbi]; };
+  MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.9.0"; sha256="1pn4v8hp2g9i6d0wn7yj28fg6nfrlxi2zw7svmqlqf0n15sj4g91"; depends=[MeSHDbi]; };
+  MeSH_db = derive2 { name="MeSH.db"; version="1.9.0"; sha256="1vljxgv6x7417sash10mjmwdqs6xmqhwxdsf5n8nn3bw283k0jkv"; depends=[MeSHDbi]; };
   MmAgilentDesign026655_db = derive2 { name="MmAgilentDesign026655.db"; version="3.2.3"; sha256="00d0yjcb5id7zacx4bzdwy4q6f4qvnnx8ph4d4xz1fmcbspz2qiz"; depends=[AnnotationDbi org_Mm_eg_db]; };
   MoExExonProbesetLocation = derive2 { name="MoExExonProbesetLocation"; version="1.15.0"; sha256="0bvj3bji4bwwmxjz4b57n1aqypdibdmry30rfwmlxss1hav96sl7"; depends=[AnnotationDbi]; };
   Mu15v1_db = derive2 { name="Mu15v1.db"; version="3.2.3"; sha256="0qchqkbx6ybijab8qhflxj33kwksfll1d3d3917vydjac9fzw1lz"; depends=[AnnotationDbi org_Mm_eg_db]; };
@@ -233,8 +230,8 @@ in with self; {
   Mus_musculus = derive2 { name="Mus.musculus"; version="1.3.1"; sha256="143zdf83gbfqhy8jm9df7gzhw5q3a64jrjrxrzjf0zd76j8s8j6y"; depends=[AnnotationDbi GenomicFeatures GO_db org_Mm_eg_db OrganismDbi TxDb_Mmusculus_UCSC_mm10_knownGene]; };
   Norway981_db = derive2 { name="Norway981.db"; version="3.2.3"; sha256="04ngc2hilqi9m7933mnm7jcvkxlz68vqqh5b628db575vcxql9b9"; depends=[AnnotationDbi org_Hs_eg_db]; };
   OperonHumanV3_db = derive2 { name="OperonHumanV3.db"; version="3.2.3"; sha256="082gff88cwk2p50q8g9bixggacaclgqcvk6w5dc11h9fkgvd160i"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  PANTHER_db = derive2 { name="PANTHER.db"; version="1.0.3"; sha256="1vsfhradfhk087vzi0jzkd7qab72g0v0x9s1rr7wblw7wjz48299"; depends=[AnnotationDbi RSQLite]; };
-  PFAM_db = derive2 { name="PFAM.db"; version="3.4.0"; sha256="1s50z6g6azm9jbxbfq2qlciapm31pv5rsylgpy4p0wsc9dbxh723"; depends=[AnnotationDbi]; };
+  PANTHER_db = derive2 { name="PANTHER.db"; version="1.0.4"; sha256="1vl8anixkhcb9axlszk479yaw48bz1hhgmff41nqk8k8w4jkyn1y"; depends=[AnnotationDbi RSQLite]; };
+  PFAM_db = derive2 { name="PFAM.db"; version="3.5.0"; sha256="14c85j6ms6cqfifpsihn6ajk6b317gw2b904skv4dqclbgcg6ymx"; depends=[AnnotationDbi]; };
   POCRCannotation_db = derive2 { name="POCRCannotation.db"; version="3.2.3"; sha256="0ybvs4hrxpivdkhm0fxpib11vlxqqdk8prlyj78vj5qzyb3iy89d"; depends=[AnnotationDbi org_Hs_eg_db]; };
   PartheenMetaData_db = derive2 { name="PartheenMetaData.db"; version="3.2.3"; sha256="0d37c5b7s3fgkkvg7sj7gl9ksrjk5pyyv54vkys8w3qwgsm8yrdz"; depends=[AnnotationDbi org_Hs_eg_db]; };
   PolyPhen_Hsapiens_dbSNP131 = derive2 { name="PolyPhen.Hsapiens.dbSNP131"; version="1.0.2"; sha256="1kikygkli41sn3rqihz0924prmqg2264ifj29vmg1a7qccm0kf7c"; depends=[AnnotationDbi RSQLite VariantAnnotation]; };
@@ -247,42 +244,41 @@ in with self; {
   SHDZ_db = derive2 { name="SHDZ.db"; version="3.2.3"; sha256="077xy2zx3f4c01di18ki32xmrwgsc1qjci3wj33nmgsy5925zdxs"; depends=[AnnotationDbi org_Hs_eg_db]; };
   SIFT_Hsapiens_dbSNP132 = derive2 { name="SIFT.Hsapiens.dbSNP132"; version="1.0.2"; sha256="1akqhmv9hp41q2jrvz4xvpdi30c4c6v4xbz6ykn6pdf0217p7xry"; depends=[AnnotationDbi RSQLite VariantAnnotation]; };
   SIFT_Hsapiens_dbSNP137 = derive2 { name="SIFT.Hsapiens.dbSNP137"; version="1.0.0"; sha256="1472abqanbwziyynr851xzhg7ck8w1n98ymmggg7s46hzix5mlj8"; depends=[AnnotationDbi RSQLite VariantAnnotation]; };
-  SNPlocs_Hsapiens_dbSNP_20090506 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20090506"; version="0.99.9"; sha256="10943wbc56mz8ywcd71ndbdz7h3a9a17mzfdvj237wsgp62arfh6"; depends=[BSgenome GenomicRanges IRanges]; };
-  SNPlocs_Hsapiens_dbSNP_20100427 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20100427"; version="0.99.7"; sha256="16m15sqxnczb399bcy7nll804h4955f6w8mag5jlda6h11yh732z"; depends=[GenomicRanges IRanges S4Vectors]; };
   SNPlocs_Hsapiens_dbSNP_20101109 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20101109"; version="0.99.7"; sha256="1r1gvx563gv1lidi099yw7lvf8c0983yck9yf8r8iypiz1d4az73"; depends=[GenomicRanges IRanges S4Vectors]; };
-  SNPlocs_Hsapiens_dbSNP_20110815 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20110815"; version="0.99.7"; sha256="0nvpa44xy7zb9q63max1q0pmfibh976blmnirryxcca20j41f8ic"; depends=[GenomicRanges IRanges S4Vectors]; };
-  SNPlocs_Hsapiens_dbSNP_20111119 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20111119"; version="0.99.7"; sha256="1znblqzb1hx5yjs2g387l3az8dga51si5blpwngvs0zbbdypgww8"; depends=[GenomicRanges IRanges S4Vectors]; };
-  SNPlocs_Hsapiens_dbSNP_20120608 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20120608"; version="0.99.10"; sha256="10crnx5jk2790h936j515jgdf2mirzzmlnvn6pbp81fd5imkvdpd"; depends=[BSgenome GenomicRanges IRanges]; };
-  SNPlocs_Hsapiens_dbSNP141_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP141.GRCh38"; version="0.99.10"; sha256="1a8ic2naa6bqc1fcylxc81j51xmc249fn40nk4yrvpjz59d6h381"; depends=[BSgenome GenomicRanges IRanges S4Vectors]; };
+  SNPlocs_Hsapiens_dbSNP_20120608 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20120608"; version="0.99.11"; sha256="0a1nyni8h3a7sq2sj5jfn3w6abkl5lwzbzhb8kg74v4359albcgm"; depends=[BSgenome GenomicRanges IRanges]; };
+  SNPlocs_Hsapiens_dbSNP141_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP141.GRCh38"; version="0.99.11"; sha256="1dl5gs9iqdvaplvggpngp37pzgbjaavw98qppv2cp65ih9rn0wc0"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
   SNPlocs_Hsapiens_dbSNP142_GRCh37 = derive2 { name="SNPlocs.Hsapiens.dbSNP142.GRCh37"; version="0.99.5"; sha256="13kmgfwzwmbrwd2g24a3cbp634jih7jigzhzq55bzzf3js48h3n3"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges]; };
-  SNPlocs_Hsapiens_dbSNP144_GRCh37 = derive2 { name="SNPlocs.Hsapiens.dbSNP144.GRCh37"; version="0.99.11"; sha256="069fkjplii6p63w8b3fjk87ynl5xv7d5bgnr78ia2n95yv6iqzjw"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
-  SNPlocs_Hsapiens_dbSNP144_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP144.GRCh38"; version="0.99.11"; sha256="1wzxb7d8v3yx8fvra4yy1zyvvh0l53ad87ksp3i1xj413cvph671"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
+  SNPlocs_Hsapiens_dbSNP144_GRCh37 = derive2 { name="SNPlocs.Hsapiens.dbSNP144.GRCh37"; version="0.99.20"; sha256="1z8kx43ki1jvj7ms7pcybakcdimfwr6zpjvspkjmma97bdz093iz"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
+  SNPlocs_Hsapiens_dbSNP144_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP144.GRCh38"; version="0.99.20"; sha256="0yxmsnxncr7w30r0d7bg5i96pclm2vf40p9jdqa02rc67a6sximn"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
+  SNPlocs_Hsapiens_dbSNP149_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP149.GRCh38"; version="0.99.20"; sha256="17bv25p1261hn9d7mxfp6pvivj15pxyvr92gms8a8msfqg9y0xkb"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
+  SNPlocs_Hsapiens_dbSNP150_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP150.GRCh38"; version="0.99.20"; sha256="0jkwwgxxpm9ry8kizq8hs70sky41pks1ag40y5aqq91yjbpqlckj"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
   TxDb_Athaliana_BioMart_plantsmart22 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart22"; version="3.0.1"; sha256="0j2zr4cddad7z1lxx9m9kfgyy7jajjnblpk9j8igd39ia3ixrpzc"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Athaliana_BioMart_plantsmart25 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart25"; version="3.1.3"; sha256="0a6v0l6p13zmiysi3k8dxzdlxng552qqj9rnlbdavdiidla0pvm3"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Athaliana_BioMart_plantsmart28 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart28"; version="3.2.2"; sha256="1yjyvrbx55y024lqg3b2rlf8pngqw5xi3p83j5ipan05wf0aq6ir"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.4.0"; sha256="1grg9vjsvlrcfdnn25q5rnr2d92ff73xfpv9fh215r23b552a5f5"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Celegans_UCSC_ce11_refGene = derive2 { name="TxDb.Celegans.UCSC.ce11.refGene"; version="3.4.0"; sha256="0sz0jd08kh604kq830h4k5g7f3dpqq0dypz0jyc1hp7mf367h16b"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.4.2"; sha256="1p7yhxdlmr4fbp4mxakdwp2xf609ws6pyrjl8xq3ilzhf6fyypim"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Celegans_UCSC_ce11_refGene = derive2 { name="TxDb.Celegans.UCSC.ce11.refGene"; version="3.4.2"; sha256="0g4l5r6mqvjsvq3q6kzlvi0w75hm2bxdq0p0pbdpdm8lf9d5aca3"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Celegans_UCSC_ce6_ensGene = derive2 { name="TxDb.Celegans.UCSC.ce6.ensGene"; version="3.2.2"; sha256="1sgppva33cdy4isj2is8mfalj5gmmkpbkq9w1d83a4agcq31mi90"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Cfamiliaris_UCSC_canFam3_refGene = derive2 { name="TxDb.Cfamiliaris.UCSC.canFam3.refGene"; version="3.3.0"; sha256="0h0n3yqdzqip1ikqq396pziyn0l5651yg87bb0cgc3gy2ldsrl74"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Cfamiliaris_UCSC_canFam3_refGene = derive2 { name="TxDb.Cfamiliaris.UCSC.canFam3.refGene"; version="3.4.2"; sha256="19vr9wi2hspsij7gwq7wnlg94zlcqvn639z3jr8s3yngr89d9mnj"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Dmelanogaster_UCSC_dm3_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm3.ensGene"; version="3.2.2"; sha256="1337x23rdmiiza83ms225kri37h16q5hw1lw0m577abcgip3d7c7"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.3.0"; sha256="1kgwb63z37zq5mspqzf2rb09vl8b71kn8aa3fsmyn8phmhay98zw"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Drerio_UCSC_danRer10_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer10.refGene"; version="3.4.0"; sha256="0vgvjb6jqzqgmnnqjx9qdn2by01p1pfrqd1ks91q2db6wqcm5jjv"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.4.0"; sha256="07d21x4sw4gwszi32wjli9hczgr1g579pq0zyzndwvkibqawvdwh"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.4.1"; sha256="0sdw0gbk84lfjmiyy2x4q01zh1vbjq3vfziwxkb4h0v6nab63k01"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Drerio_UCSC_danRer10_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer10.refGene"; version="3.4.2"; sha256="1cqc7vlv2jrznh9s0yb70nwy0a2pa7iswr4m253zx6p197igf33l"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.4.2"; sha256="0d7wqrg69kj65rga9m473ji1s9251gvz6l071ibqmga31imrgb9l"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Ggallus_UCSC_galGal5_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal5.refGene"; version="3.4.2"; sha256="1j68yqfbnas21za7y63p1kpi85jbxb7l3m6i50ig9mp6mmvy7i26"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Hsapiens_BioMart_igis = derive2 { name="TxDb.Hsapiens.BioMart.igis"; version="2.3.2"; sha256="0590a2hkrpm33hmjg5g0gm6sig3xvc09m0q6lwmafgaajf90h6ky"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Hsapiens_UCSC_hg18_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg18.knownGene"; version="3.2.2"; sha256="1yk9ggclkqqfzrdp8gcqyplvif824pa7df54ck5gb1xb9q5s975w"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Hsapiens_UCSC_hg19_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg19.knownGene"; version="3.2.2"; sha256="1sajhcqqwazgz2lqbik7rd935i7kpnh08zxbp2ra10j72yqy4g86"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Hsapiens_UCSC_hg19_lincRNAsTranscripts = derive2 { name="TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts"; version="3.2.2"; sha256="0bmbp7kydvviczw8axgxq2wdlwq6fdas90jk9bg56avjq5syws2g"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Hsapiens_UCSC_hg38_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg38.knownGene"; version="3.4.0"; sha256="0i0xw0mcn403r911ijqdnrwg9k5bspdnjibfjvnhxq4h8vcfprn5"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.4.0"; sha256="0ap8qn2bza0j9ismnpv2l64wdbzc9i0q6sb1w195134hwq9cr51y"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.4.0"; sha256="1d61p9aj2wv4gdx2q5g33j7hipzfj1a4zi6apn058cffy1clyrn9"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.4.2"; sha256="1k2kaik3zvnx3giia1dps06073xkbvd4dva6npskkvzhvqpfxq41"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.4.2"; sha256="1wma6pm5v9qv29h76p7aj7kwq0l857as0wgya3ryj3mynhsf9j9j"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Mmusculus_UCSC_mm10_ensGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.ensGene"; version="3.4.0"; sha256="0saxi1fdiwd38sfvy1rynd3v44rbp158jv6sjqcivvaqnd84zg9s"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Mmusculus_UCSC_mm10_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.knownGene"; version="3.4.0"; sha256="08gava9wsvpcqz51k2sni3pj03n5155v32d9riqbf305nbirqbkb"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Mmusculus_UCSC_mm9_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm9.knownGene"; version="3.2.2"; sha256="16bjxy00363hf91ik2mqlqls86i07gia72qh92xc3l1ncch61mx2"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Ptroglodytes_UCSC_panTro4_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro4.refGene"; version="3.4.0"; sha256="08kihk3sl1hw32rf8122y03grbg1xdbc84z1b2ldnf752xr4zn9x"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Ptroglodytes_UCSC_panTro4_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro4.refGene"; version="3.4.2"; sha256="0gqrv5n1c63p5cdl1c0l866x9qgfqf6w23p6m12zaxn8riacdnyi"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Rnorvegicus_BioMart_igis = derive2 { name="TxDb.Rnorvegicus.BioMart.igis"; version="2.3.2"; sha256="1099vkk8g3lxbgjxsm1p1m3mjj08nsw282mqxgzpnrxf7m6jll76"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Rnorvegicus_UCSC_rn4_ensGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn4.ensGene"; version="3.2.2"; sha256="0gv8bynfxxa471ap069mjvfrb1d7a0c4w5k8hxkr4hnsm44mschm"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Rnorvegicus_UCSC_rn5_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn5.refGene"; version="3.4.0"; sha256="1p3m7g24x7pvavwix5r5kyqsklv7hxav23nz36cs7gsqh1ifizaq"; depends=[AnnotationDbi GenomicFeatures]; };
-  TxDb_Rnorvegicus_UCSC_rn6_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn6.refGene"; version="3.4.0"; sha256="1f1b16ya35x7x5x2j7a62qlg2ka5wd3521kfbk2xp4dr8h5ah6mx"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Rnorvegicus_UCSC_rn5_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn5.refGene"; version="3.4.2"; sha256="11yxvr20dmjjxw4pyxfnxy8znlxr48xqq9hb6k95y9dyqnir0vik"; depends=[AnnotationDbi GenomicFeatures]; };
+  TxDb_Rnorvegicus_UCSC_rn6_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn6.refGene"; version="3.4.1"; sha256="08w4279c5aq5pazbbdji344lxz113n763q8j2mlagcwfs9r5k9sk"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Scerevisiae_UCSC_sacCer2_sgdGene = derive2 { name="TxDb.Scerevisiae.UCSC.sacCer2.sgdGene"; version="3.2.2"; sha256="0l5gcwhbvzx60p9hjhd31angamb0hkgdg2avga7341j77rd5pwza"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Scerevisiae_UCSC_sacCer3_sgdGene = derive2 { name="TxDb.Scerevisiae.UCSC.sacCer3.sgdGene"; version="3.2.2"; sha256="1sjwl7fb3l3zxxbk8gkvzxwdsind0xjj7kmh7dachm6fi17hpb3d"; depends=[AnnotationDbi GenomicFeatures]; };
   TxDb_Sscrofa_UCSC_susScr3_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr3.refGene"; version="3.4.0"; sha256="0jpvb3phw0967my7afk8scsjzpq1x0i2za534ndizzql3cp45yh7"; depends=[AnnotationDbi GenomicFeatures]; };
@@ -294,22 +290,22 @@ in with self; {
   agcdf = derive2 { name="agcdf"; version="2.18.0"; sha256="07hq41dwqs7yy2sck8p7zl3v9x4bgl35kkycpazz5ql2g5zy6b7j"; depends=[AnnotationDbi]; };
   agprobe = derive2 { name="agprobe"; version="2.18.0"; sha256="1vnawamcpz16na8nmlq2czfxcr325fwdnngxl65mmnbd0f4lmy3k"; depends=[AnnotationDbi]; };
   alternativeSplicingEvents_hg19 = derive2 { name="alternativeSplicingEvents.hg19"; version="1.0.0"; sha256="1bcqn20a963l49ah3j59nmd5qd15qad56p7k3880q4cp7qza2xsw"; depends=[AnnotationHub]; };
-  anopheles_db0 = derive2 { name="anopheles.db0"; version="3.4.1"; sha256="0pzd8yij4ixdp48sr0ksjdmx3mw9gaizgj1rx33375a7091580yf"; depends=[AnnotationDbi]; };
-  arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.4.1"; sha256="0rcpiaf0157c8v433a7khnam6g15siai1xbmf4gviw5vgw8l5a9l"; depends=[AnnotationDbi]; };
+  anopheles_db0 = derive2 { name="anopheles.db0"; version="3.5.0"; sha256="0ycprvhry525p4hmxng2swcf92m9fsyqcj8na13q9i5p6s1sl5b2"; depends=[AnnotationDbi]; };
+  arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.5.0"; sha256="0xpa7d15av8pa2l5ksx8mcabhyfdxyk1hw2sd1gdyhyfcn7mjxky"; depends=[AnnotationDbi]; };
   ath1121501_db = derive2 { name="ath1121501.db"; version="3.2.3"; sha256="1zrf26cfhlmrb5pyfawwk4v8l1mflx8c43zsxrwkbmxzc1jnc7dv"; depends=[AnnotationDbi org_At_tair_db]; };
   ath1121501cdf = derive2 { name="ath1121501cdf"; version="2.18.0"; sha256="1naq8f8dwgbmndx178nm2pw6hjx5ljx0w1wb4dfjifnl4bs5rqcc"; depends=[AnnotationDbi]; };
   ath1121501probe = derive2 { name="ath1121501probe"; version="2.18.0"; sha256="0a2nd8zhp3ybis780l3rrmwcxskbl3a111g8w6m8qfwsw5vnlqg1"; depends=[AnnotationDbi]; };
   barley1cdf = derive2 { name="barley1cdf"; version="2.18.0"; sha256="0rbij5cqr2sz33y5waybv85nrcgf70iwj5gk13g0xn9p1l1zxyn2"; depends=[AnnotationDbi]; };
   barley1probe = derive2 { name="barley1probe"; version="2.18.0"; sha256="1kh5r748b4vkmvlfaclmrh07ypbrzgxn90liqfz1rwkabh6rfk71"; depends=[AnnotationDbi]; };
   bovine_db = derive2 { name="bovine.db"; version="3.2.3"; sha256="1i8mgk60hlmvngb4c727wajix9mca9gfg0pzxrnfcjwi87rpw7fy"; depends=[AnnotationDbi org_Bt_eg_db]; };
-  bovine_db0 = derive2 { name="bovine.db0"; version="3.4.1"; sha256="113pi0dr4jc0vr2gfm8pkavz72s16bw3l6ml3hmvzjy89yg9r0s0"; depends=[AnnotationDbi]; };
+  bovine_db0 = derive2 { name="bovine.db0"; version="3.5.0"; sha256="0h02wrj18c24rgkbdnva5qc3znn30i5357c9rzww7y4brhhww8ma"; depends=[AnnotationDbi]; };
   bovinecdf = derive2 { name="bovinecdf"; version="2.18.0"; sha256="13mf0yy0dypkm5n2ghl04xm6ayb9bn9qijqhgynksghi7s2k34mb"; depends=[AnnotationDbi]; };
   bovineprobe = derive2 { name="bovineprobe"; version="2.18.0"; sha256="0i4afa5dksnir2nfrfh2cynjm59sm6vfaqa9wyag8cxg7c2nlm1i"; depends=[AnnotationDbi]; };
   bsubtiliscdf = derive2 { name="bsubtiliscdf"; version="2.18.0"; sha256="1rihrjim37b49rhqr4nxga8sp67qri9xqlqc141mhbngh6cw3iyl"; depends=[AnnotationDbi]; };
   bsubtilisprobe = derive2 { name="bsubtilisprobe"; version="2.18.0"; sha256="0k99hvgaswn96x4yanvr9cy8bdy69sd5q7yp6dj9synxj7s1fcw9"; depends=[AnnotationDbi]; };
   cMAP = derive2 { name="cMAP"; version="1.15.1"; sha256="0pzizm27rgcaic7wsh52z30v1jwarmz4cwh1mksbygp63k54mwiv"; depends=[]; };
   canine_db = derive2 { name="canine.db"; version="3.2.3"; sha256="0wbyzhk827l49yxzimvznx9z6yag5nd4djm2hddysf5nk1ndapqs"; depends=[AnnotationDbi org_Cf_eg_db]; };
-  canine_db0 = derive2 { name="canine.db0"; version="3.4.1"; sha256="11imzg70ffkfnb1q6i9q3mj033ncl9pmzpkv2wp3nc3l5nz8z2sg"; depends=[AnnotationDbi]; };
+  canine_db0 = derive2 { name="canine.db0"; version="3.5.0"; sha256="1a7qn0jg1yw8222k72058ymbws14fs0y6m4girxzs3v8xbyxji7v"; depends=[AnnotationDbi]; };
   canine2_db = derive2 { name="canine2.db"; version="3.2.3"; sha256="1gzd2x23dkfiwnwqz9pdn5lp4l8aby525mhscn3xakw633si4dvz"; depends=[AnnotationDbi org_Cf_eg_db]; };
   canine2cdf = derive2 { name="canine2cdf"; version="2.18.0"; sha256="077cmmnhjdk0vxjzm1kqf3q5kgx6chwkm59dr4s5dy019rqb6sqr"; depends=[AnnotationDbi]; };
   canine2probe = derive2 { name="canine2probe"; version="2.18.0"; sha256="1l849a1dqy4kpcsxs0lvb48ag81i0f0ys0w4757rw4kp8ry59z4b"; depends=[AnnotationDbi]; };
@@ -319,20 +315,20 @@ in with self; {
   celeganscdf = derive2 { name="celeganscdf"; version="2.18.0"; sha256="0a6w0a48azg0i21j3aqb7fnxck3ff9w3gsi89bnlfh0zx6pknx7p"; depends=[AnnotationDbi]; };
   celegansprobe = derive2 { name="celegansprobe"; version="2.18.0"; sha256="05k7si3f8pzkyb8jv0r2vkavbrqxsn4nawl92gcphfsylrwcddqb"; depends=[AnnotationDbi]; };
   chicken_db = derive2 { name="chicken.db"; version="3.2.3"; sha256="1rq9afkpcpv8qi75shvnsw8di3ycai4ylv7jq9zwj51zlwlw9cpq"; depends=[AnnotationDbi org_Gg_eg_db]; };
-  chicken_db0 = derive2 { name="chicken.db0"; version="3.4.1"; sha256="0gfd9nrkdnjymqdssijp5r9mdj2r6bmnkf6y4xh6ri90b02d1xpf"; depends=[AnnotationDbi]; };
+  chicken_db0 = derive2 { name="chicken.db0"; version="3.5.0"; sha256="134ch8bgzjdra9pycs49lmak380qgx71dbmr1s276pyf3h67fzxp"; depends=[AnnotationDbi]; };
   chickencdf = derive2 { name="chickencdf"; version="2.18.0"; sha256="09hhim5s9xj7n2b5rhn1svf5qly2mn0rr2v2ls25hfzyrqcbxlz1"; depends=[AnnotationDbi]; };
   chickenprobe = derive2 { name="chickenprobe"; version="2.18.0"; sha256="1fdsiwfyg7fwslrr7xs3gny7sw24bzg5k1fvlyzb1477sgj0pid3"; depends=[AnnotationDbi]; };
-  chimp_db0 = derive2 { name="chimp.db0"; version="3.4.1"; sha256="06z4kmpnsj98mi5j0ahz57grlbdqb8ycl8rf592561lvmzzdfs8h"; depends=[AnnotationDbi]; };
+  chimp_db0 = derive2 { name="chimp.db0"; version="3.5.0"; sha256="12smymvq4l7aw454lah9gd0rywgi3bcbd3vf8h6a93y2mnhdxz9q"; depends=[AnnotationDbi]; };
   citruscdf = derive2 { name="citruscdf"; version="2.18.0"; sha256="1326mj1xf3k4v5iyyn46whx24qfng0x3cv6rvckdr1ycc1v887dn"; depends=[AnnotationDbi]; };
   citrusprobe = derive2 { name="citrusprobe"; version="2.18.0"; sha256="0bf1wic136cxwgs4j13wsyqasnyvr0jw1hzg6qizndmy7g8hrb87"; depends=[AnnotationDbi]; };
-  clariomdhumanprobeset_db = derive2 { name="clariomdhumanprobeset.db"; version="8.5.0"; sha256="0hb3bsdh79aajgb9vk34kpd61py6rxv4vm8ygzm531nrh44s7a33"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  clariomdhumantranscriptcluster_db = derive2 { name="clariomdhumantranscriptcluster.db"; version="8.5.0"; sha256="1kfv4f0jbd4a63mk83jhpbhfhlyka9hwfik7i52kszkb8grgz48d"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  clariomshumanhttranscriptcluster_db = derive2 { name="clariomshumanhttranscriptcluster.db"; version="8.5.0"; sha256="07x7gl4p9dyrk41hx6d5ddsj3raz7gqimc79irfia2ismazwvd95"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  clariomshumantranscriptcluster_db = derive2 { name="clariomshumantranscriptcluster.db"; version="8.5.0"; sha256="0h4i35pglq6mwxxflg7l09f8a1xvhnrjygns54bnv8cyj97vq2a3"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  clariomsmousehttranscriptcluster_db = derive2 { name="clariomsmousehttranscriptcluster.db"; version="8.5.0"; sha256="1qvn0dpakh7g43wrssg2wyy5zi5axs7bqfmc97d8jgk56rwyzh46"; depends=[AnnotationDbi org_Mm_eg_db]; };
-  clariomsmousetranscriptcluster_db = derive2 { name="clariomsmousetranscriptcluster.db"; version="8.5.0"; sha256="17y506pcfq8x9g4xl6wm9di545bgbzc54mjlybmz19c56456z5w9"; depends=[AnnotationDbi org_Mm_eg_db]; };
-  clariomsrathttranscriptcluster_db = derive2 { name="clariomsrathttranscriptcluster.db"; version="8.5.0"; sha256="18dxnpvck3qfw660mx70d8psa1grzv9h43zf36qa6m958ybmcq19"; depends=[AnnotationDbi org_Rn_eg_db]; };
-  clariomsrattranscriptcluster_db = derive2 { name="clariomsrattranscriptcluster.db"; version="8.5.0"; sha256="1ds9vssyg9zpp99zzd6110k1x9v2ji455k7xmk4nd699y1vfc67x"; depends=[AnnotationDbi org_Rn_eg_db]; };
+  clariomdhumanprobeset_db = derive2 { name="clariomdhumanprobeset.db"; version="8.7.0"; sha256="039bsywnim0nr8b3w6vkj4m20j0pggnm6ajjz24bnlikm9zzrs6l"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  clariomdhumantranscriptcluster_db = derive2 { name="clariomdhumantranscriptcluster.db"; version="8.7.0"; sha256="0lp6qb4f3qsm3krcagl5fd403i5yz5apimf57wlrj99r8zrax4s2"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  clariomshumanhttranscriptcluster_db = derive2 { name="clariomshumanhttranscriptcluster.db"; version="8.7.0"; sha256="1f9lqyr0slynb317vp4bys3s9y9ivxnyayy6zh8cilsdz64glzmj"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  clariomshumantranscriptcluster_db = derive2 { name="clariomshumantranscriptcluster.db"; version="8.7.0"; sha256="0f6g20zymxnamhspv18cz32qd842nxwyf8mwznsn5yhf3brab437"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  clariomsmousehttranscriptcluster_db = derive2 { name="clariomsmousehttranscriptcluster.db"; version="8.7.0"; sha256="0xzzyy8ppwgii0ymkg4agrhw84qgb6hdr8pyh8flyqyd2xbih9xa"; depends=[AnnotationDbi org_Mm_eg_db]; };
+  clariomsmousetranscriptcluster_db = derive2 { name="clariomsmousetranscriptcluster.db"; version="8.7.0"; sha256="1rf06mj4s6dqi77982wjjs0ssb53j4rk7q4k9wq6iwj4xgz29npk"; depends=[AnnotationDbi org_Mm_eg_db]; };
+  clariomsrathttranscriptcluster_db = derive2 { name="clariomsrathttranscriptcluster.db"; version="8.7.0"; sha256="10qh0cz0jyy88nh43p3f0i588r0d8xqkgjr6s62i1273bkrpijr4"; depends=[AnnotationDbi org_Rn_eg_db]; };
+  clariomsrattranscriptcluster_db = derive2 { name="clariomsrattranscriptcluster.db"; version="8.7.0"; sha256="1gh3jimr6jjkgh3zgvw9s1gynyawz8gckm9xghwsl9rii7vzy135"; depends=[AnnotationDbi org_Rn_eg_db]; };
   cottoncdf = derive2 { name="cottoncdf"; version="2.18.0"; sha256="0xfwwla941fbxddykgizpar8dh8q459src7kc5wyrsd3swp3zyp5"; depends=[AnnotationDbi]; };
   cottonprobe = derive2 { name="cottonprobe"; version="2.18.0"; sha256="04mfjd3a7ikif4pv46s6h9dj2s912w8ihg4yyiii7s3jlmvy62ah"; depends=[AnnotationDbi]; };
   cyp450cdf = derive2 { name="cyp450cdf"; version="2.18.0"; sha256="1mbqn9940sxc0ksvykdk3i4jvnkv9q91igwn1rwmv2z18hz18qf0"; depends=[AnnotationDbi]; };
@@ -345,43 +341,19 @@ in with self; {
   ecoli2_db = derive2 { name="ecoli2.db"; version="3.2.3"; sha256="07vc5fl2zq2f65ndcldyzvwfpl65snp6ygvw658j4036lbb7cpjl"; depends=[AnnotationDbi org_EcK12_eg_db]; };
   ecoli2cdf = derive2 { name="ecoli2cdf"; version="2.18.0"; sha256="1rkxrwadq9kg9685z9pg6rgc4bblkx5p3c6snsl4gv2k188dva9r"; depends=[AnnotationDbi]; };
   ecoli2probe = derive2 { name="ecoli2probe"; version="2.18.0"; sha256="11q4ka0ncjapahic49xdl9919vm9frrwlqgj101krgkg262lfm8n"; depends=[AnnotationDbi]; };
-  ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.4.1"; sha256="1v9qa6pxwwc3ykh8nasi42vld07c9il0j72vfc8lpsxi9v56l5cs"; depends=[AnnotationDbi]; };
-  ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.4.1"; sha256="18shfvqbv925xi694zv8c1mfxndrnsmkxdncncld11ra17wqs6cp"; depends=[AnnotationDbi]; };
+  ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.5.0"; sha256="0g11rjb0373dc3a5m4padk43p4l204yw4lmvasnvk0p6cl0c4zlw"; depends=[AnnotationDbi]; };
+  ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.5.0"; sha256="1cwafxgai0lfwv7fdicrla3lj6k5lv7wz3vz6a0vqzhna3wb3ajz"; depends=[AnnotationDbi]; };
   ecoliasv2cdf = derive2 { name="ecoliasv2cdf"; version="2.18.0"; sha256="16i6has9qgmzakcy24racc1h9j331wndv5c87qp5r1zrai61zyav"; depends=[AnnotationDbi]; };
   ecoliasv2probe = derive2 { name="ecoliasv2probe"; version="2.18.0"; sha256="1hfrnal170cdigc2fmnynb75jjsiq77p4x6ws9gah558hvx87nk3"; depends=[AnnotationDbi]; };
   ecolicdf = derive2 { name="ecolicdf"; version="2.18.0"; sha256="18g5prjykn356k35m131ifn128k5mhij2x26balqav0azigzjqsn"; depends=[AnnotationDbi]; };
   ecoliprobe = derive2 { name="ecoliprobe"; version="2.18.0"; sha256="17g5zxfzsak7a0w51irc0w1w2i5ngdkx9db6rhv1fyp8mfjgaphd"; depends=[AnnotationDbi]; };
-  fitCons_UCSC_hg19 = derive2 { name="fitCons.UCSC.hg19"; version="3.4.0"; sha256="1nlbmzngg077p1bz462qsyvhc9k6pn2vzmvmsqs0hwrxsk2myvgq"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; };
-  fly_db0 = derive2 { name="fly.db0"; version="3.4.1"; sha256="10bh5mrl163w433fr8g8n5b190wqcldxvxdamw13gwn79hymbjr4"; depends=[AnnotationDbi]; };
-  gahgu133a_db = derive2 { name="gahgu133a.db"; version="2.2.0"; sha256="1ikyvj1gi39qbakpn5wl0823ljavng1k33zvpf2k24jdhdw927qb"; depends=[AnnotationDbi]; };
-  gahgu133acdf = derive2 { name="gahgu133acdf"; version="2.2.1"; sha256="0hvd4iwj2fjiqp1jzbz68i1w6jn77nrsih316jlj85bhb35f7cyv"; depends=[]; };
-  gahgu133aprobe = derive2 { name="gahgu133aprobe"; version="2.2.1"; sha256="108lki2bg55ysh485shxxsz1imm26g5a3grgcmxbfs4pgna3g4h0"; depends=[AnnotationDbi]; };
-  gahgu133b_db = derive2 { name="gahgu133b.db"; version="2.2.0"; sha256="06hyjnr387wk40jjdk8gzqpfp4afjzva9fky3l4qs249ycy4snic"; depends=[AnnotationDbi]; };
-  gahgu133bcdf = derive2 { name="gahgu133bcdf"; version="2.2.1"; sha256="0qbqirflzjy0is3m9zca1660aszxf947fa7d26baw6vm2b37qg4q"; depends=[]; };
-  gahgu133bprobe = derive2 { name="gahgu133bprobe"; version="2.2.1"; sha256="1i8wcnp8434f6zxib86yhpm904clwg907x1hgjfsgy4viqa4jbqv"; depends=[AnnotationDbi]; };
-  gahgu133plus2_db = derive2 { name="gahgu133plus2.db"; version="2.2.0"; sha256="1p48q1zqrjdvv6qq5br9v24fpryp2zy3z079nkgrgr4d2brvhab8"; depends=[AnnotationDbi]; };
-  gahgu133plus2cdf = derive2 { name="gahgu133plus2cdf"; version="2.2.1"; sha256="1fmv6rrjbii1g5grcvgl13w814mbqqyqyav0wi82d30v4ijz58g9"; depends=[]; };
-  gahgu133plus2probe = derive2 { name="gahgu133plus2probe"; version="2.2.1"; sha256="0r3vizwmvy0jmsqbplagkincj5xs71dk7csgwwv4arx80kbl9l9l"; depends=[AnnotationDbi]; };
-  gahgu95av2_db = derive2 { name="gahgu95av2.db"; version="2.2.0"; sha256="1c1hc79rjisx7jd7sdlr2d1lnk621y8azshriia12b5z0l5j9m4h"; depends=[AnnotationDbi]; };
-  gahgu95av2cdf = derive2 { name="gahgu95av2cdf"; version="2.2.1"; sha256="1ckcjlb4v9x9zynf5w1h5fgmdr4ck22h9bjfwz3n184v48wgi39r"; depends=[]; };
-  gahgu95av2probe = derive2 { name="gahgu95av2probe"; version="2.2.1"; sha256="033zk49kp4r5in6yk3za8ll5wrchiklfrzc10c8lgqhpm6y8y5k2"; depends=[AnnotationDbi]; };
-  gahgu95b_db = derive2 { name="gahgu95b.db"; version="2.2.0"; sha256="0v4lpbqqhm6mvpm0biykcq0ym1rb968zcwp9rg1lv6zka5arj9fq"; depends=[AnnotationDbi]; };
-  gahgu95bcdf = derive2 { name="gahgu95bcdf"; version="2.2.1"; sha256="1f8yp4g3cjbl11x0wajln7bms3jhy6cbyh0bggm38gbb18gws4wg"; depends=[]; };
-  gahgu95bprobe = derive2 { name="gahgu95bprobe"; version="2.2.1"; sha256="1lr91f57ym3lxz5bi9xm3g63vskw5js991h5zk4c2i2npi0x22gm"; depends=[AnnotationDbi]; };
-  gahgu95c_db = derive2 { name="gahgu95c.db"; version="2.2.0"; sha256="1psjf511agrv7nma4wa39jgd82z82df42d5g8jvwjrm2wb6l2v4l"; depends=[AnnotationDbi]; };
-  gahgu95ccdf = derive2 { name="gahgu95ccdf"; version="2.2.1"; sha256="1lcal0y48vhafikkrn744l1gxrnlhkh7jmmhb7pglc9ldh7x9azh"; depends=[]; };
-  gahgu95cprobe = derive2 { name="gahgu95cprobe"; version="2.2.1"; sha256="155vnch85m6ph7av8j4ylrqajm3vc2v623qpkixqh06l4fy59pck"; depends=[AnnotationDbi]; };
-  gahgu95d_db = derive2 { name="gahgu95d.db"; version="2.2.0"; sha256="0k0ricb8cl3xh93nq8rr3206w18b91ca67992cc5b2fbaf8lxlba"; depends=[AnnotationDbi]; };
-  gahgu95dcdf = derive2 { name="gahgu95dcdf"; version="2.2.1"; sha256="181h5i9ywpn6vwdvcd2sq5yxkx41h09plgqsdfigw5w7816524k6"; depends=[]; };
-  gahgu95dprobe = derive2 { name="gahgu95dprobe"; version="2.2.1"; sha256="0znll2h3cm1sbyzjk121fxizs4qv5jd80kslr5zhdd73dkdlzlbm"; depends=[AnnotationDbi]; };
-  gahgu95e_db = derive2 { name="gahgu95e.db"; version="2.2.0"; sha256="1qbsshgvzfavpjrawn3lbl0pcfwl0g7n8vr1109gvax6gj00la7n"; depends=[AnnotationDbi]; };
-  gahgu95ecdf = derive2 { name="gahgu95ecdf"; version="2.2.1"; sha256="1bsh380h7ai4l6j8jjz8yzfdwgxyhpnqm5fnb6mgma76xbiwab4b"; depends=[]; };
-  gahgu95eprobe = derive2 { name="gahgu95eprobe"; version="2.2.1"; sha256="0c4zx8d7qsb3xhy0prfh7l6xbklgpxbbznqhq9mmgjb8qh5g9ygz"; depends=[AnnotationDbi]; };
+  fitCons_UCSC_hg19 = derive2 { name="fitCons.UCSC.hg19"; version="3.6.0"; sha256="08wfrcmbpgbgfzfr9gpg25073905fhz14s8jz2wckdmhwjlgavky"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; };
+  fly_db0 = derive2 { name="fly.db0"; version="3.5.0"; sha256="18r1m5b6v4km9cdyd0pkxvargh2bcz876y8iwqhbxkf16b9d70qj"; depends=[AnnotationDbi]; };
   genomewidesnp5Crlmm = derive2 { name="genomewidesnp5Crlmm"; version="1.0.6"; sha256="06dmwnjy3gb53y6nr02dmp22qzfl5d63wppazrabcqbzwimhnvp8"; depends=[]; };
   genomewidesnp6Crlmm = derive2 { name="genomewidesnp6Crlmm"; version="1.0.7"; sha256="16qcxa32fmbdcv5dck0grsnqyfcqql7wpxa1l6andv9hrvabv2jx"; depends=[]; };
   gp53cdf = derive2 { name="gp53cdf"; version="2.18.0"; sha256="11p69rxia8bqajix3jg34vnhczyxgpq50k5kdh878h7bn0mpg6bj"; depends=[AnnotationDbi]; };
-  grasp2db = derive2 { name="grasp2db"; version="0.1.14"; sha256="14y25k1fwh0272ws83rcpi25wc97r4z5mpmck8q9i9nshd5dmym4"; depends=[AnnotationHub digest dplyr GenomeInfoDb RSQLite]; };
-  greengenes13_5MgDb = derive2 { name="greengenes13.5MgDb"; version="0.99.0"; sha256="1ssh015yspl470wq5rnkxkb7xid27gzvga3hx9a9vj08iqal3rbq"; depends=[metagenomeFeatures]; };
+  grasp2db = derive2 { name="grasp2db"; version="1.1.0"; sha256="1aq19myhcl9kdmzy8f4c3ilf0s0ng99rl58jja2xlmqsm2hik7ya"; depends=[AnnotationHub dbplyr digest dplyr GenomeInfoDb RSQLite]; };
+  greengenes13_5MgDb = derive2 { name="greengenes13.5MgDb"; version="1.0.0"; sha256="0y9570c7cchwv9d5rgwhfz6k5qmi11g2smqq8q23z66iv333kii1"; depends=[metagenomeFeatures]; };
   h10kcod_db = derive2 { name="h10kcod.db"; version="3.4.0"; sha256="0f30n339ib8q478a7axjdh8hzrqws762m680ha0sxm3a0nxwapgg"; depends=[AnnotationDbi org_Hs_eg_db]; };
   h20kcod_db = derive2 { name="h20kcod.db"; version="3.4.0"; sha256="0csh59bgpn5xyaw6bfg7nvi9vcvjd4f66f0dr3xh7c6316835mnx"; depends=[AnnotationDbi org_Hs_eg_db]; };
   hapmap370k = derive2 { name="hapmap370k"; version="1.0.1"; sha256="0n6rmrqcbl665a1l6jxk1gn6518x4gxadzy5dc9k9v01cbh3qzmw"; depends=[]; };
@@ -452,8 +424,8 @@ in with self; {
   hom_Sc_inp_db = derive2 { name="hom.Sc.inp.db"; version="3.1.2"; sha256="0l9nly3k7jnf6g1qnwyw22ga1hdyjdvn3hrlway8pb9rv7279bil"; depends=[AnnotationDbi]; };
   hs25kresogen_db = derive2 { name="hs25kresogen.db"; version="2.5.0"; sha256="1yp25ifm3bwzkzm8vimlxw5slini7drhvmh5ggh0z80sfrjyndyf"; depends=[AnnotationDbi org_Hs_eg_db]; };
   hspeccdf = derive2 { name="hspeccdf"; version="0.99.1"; sha256="07azl9zpg552ic7li14p6n09ba3jbqqclwffjfpd2vc249x0n4fw"; depends=[AnnotationDbi]; };
-  hta20probeset_db = derive2 { name="hta20probeset.db"; version="8.5.0"; sha256="0d1gydcxgcxgchg7imlbkc6acz6py894v6m2i7wl6mpm793az7r6"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  hta20transcriptcluster_db = derive2 { name="hta20transcriptcluster.db"; version="8.5.0"; sha256="114l2jh1zg4jiirw2gp5djp7x4yf9l9x4hrxfflzzk2b0gc66fwk"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  hta20probeset_db = derive2 { name="hta20probeset.db"; version="8.7.0"; sha256="12m58w0av2b806w75df7spg72d0v7mr7vlhsgdc9h221r0g06vgx"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  hta20transcriptcluster_db = derive2 { name="hta20transcriptcluster.db"; version="8.7.0"; sha256="1aipxv8c6dwhhhxp0r75j79k038qk4jkmxcdzqiph3k0ylpikmb8"; depends=[AnnotationDbi org_Hs_eg_db]; };
   hthgu133a_db = derive2 { name="hthgu133a.db"; version="3.2.3"; sha256="0sgi7pbkndcpl775qn36rdlsm4j6ip2lfk0cmkh8zqryrj3yq6hh"; depends=[AnnotationDbi org_Hs_eg_db]; };
   hthgu133acdf = derive2 { name="hthgu133acdf"; version="2.18.0"; sha256="1a5b421lx0nxy3mrrxjxifwjpnv289c5q2a89xhnkwlcfhqlzqrp"; depends=[AnnotationDbi]; };
   hthgu133afrmavecs = derive2 { name="hthgu133afrmavecs"; version="1.3.0"; sha256="0466xgi67r5rpp7cs06ib0cr6vvx8d881g5l96b8sh9948pbn4ss"; depends=[]; };
@@ -493,20 +465,20 @@ in with self; {
   hu6800subccdf = derive2 { name="hu6800subccdf"; version="2.18.0"; sha256="1xir2k62whqf39g7g5rm646nz6hxq83nldrrc3cyzch85723a55p"; depends=[AnnotationDbi]; };
   hu6800subdcdf = derive2 { name="hu6800subdcdf"; version="2.18.0"; sha256="1caiyyna5ffnnx85h9f62h2fwd42wwi187g9igspcy8mn2hakpfw"; depends=[AnnotationDbi]; };
   huex_1_0_st_v2frmavecs = derive2 { name="huex.1.0.st.v2frmavecs"; version="1.1.0"; sha256="0fnadflyg615v7w071jilg42w8w5fvnac7rm0wg33klvzx9c9knx"; depends=[]; };
-  huex10stprobeset_db = derive2 { name="huex10stprobeset.db"; version="8.5.0"; sha256="0yrc5hf2yhxr33xr7mlrljbndbxl1mcv1ylnfak8wnhkzlbz5ir1"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  huex10sttranscriptcluster_db = derive2 { name="huex10sttranscriptcluster.db"; version="8.5.0"; sha256="1ybxzqqpxfdjpw7mkyn1ydyghgsv5yfp27byi3yifpjz3ymm0lzi"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  huex10stprobeset_db = derive2 { name="huex10stprobeset.db"; version="8.7.0"; sha256="14m5rkn9nksn84dlcl29wpahxsxhaswkcnc75mbsfagk5fh2qybj"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  huex10sttranscriptcluster_db = derive2 { name="huex10sttranscriptcluster.db"; version="8.7.0"; sha256="1xdsrx34625ad6sjkq166i8xlmwdwhsisi8dbjj6zkazg4mbxhd0"; depends=[AnnotationDbi org_Hs_eg_db]; };
   hugene_1_0_st_v1frmavecs = derive2 { name="hugene.1.0.st.v1frmavecs"; version="1.1.0"; sha256="0jwk5mm37fil3h9h1hrc4bm3sxfdzywbmsqm1blvrvb5q6jgl50a"; depends=[]; };
-  hugene10stprobeset_db = derive2 { name="hugene10stprobeset.db"; version="8.5.0"; sha256="1sh6ca1abnd5a09rcpa99gfpcnl0vjk49v8hnkbrzlrm8b6z603a"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  hugene10sttranscriptcluster_db = derive2 { name="hugene10sttranscriptcluster.db"; version="8.5.0"; sha256="0ydqq477ms68q8g7k8zj5mz609cdyk5ly5mxvvkzpbfrw7r663jd"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  hugene10stprobeset_db = derive2 { name="hugene10stprobeset.db"; version="8.7.0"; sha256="170fdxmhbi6k115gbmvsmmq6hphbmj7yw23ycsjr9v963pwjk0ml"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  hugene10sttranscriptcluster_db = derive2 { name="hugene10sttranscriptcluster.db"; version="8.7.0"; sha256="11wr9d6bp7yf66hdfx3vnp88brwkxwbxvfdnwyyffdpcaa92c6s3"; depends=[AnnotationDbi org_Hs_eg_db]; };
   hugene10stv1cdf = derive2 { name="hugene10stv1cdf"; version="2.18.0"; sha256="1drsclrcf344z4m61qxd1a1lg2qrd2h7s3y6kk7xcy76s2mqjx2f"; depends=[AnnotationDbi]; };
   hugene10stv1probe = derive2 { name="hugene10stv1probe"; version="2.18.0"; sha256="1cn6hdw1mj0i4f0syvx8g1r02bbki994y3s9hrdps3kvcbaw6brd"; depends=[AnnotationDbi]; };
-  hugene11stprobeset_db = derive2 { name="hugene11stprobeset.db"; version="8.5.0"; sha256="1akfj1z69s5kda10rybbpx0gl1ziwjq8nf0vr0sd24vzn3z0ml34"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  hugene11sttranscriptcluster_db = derive2 { name="hugene11sttranscriptcluster.db"; version="8.5.0"; sha256="1shmhzqy5zjaj564j6gfhs5plg3rhiz46qk2mkm7xyysgkjwwq90"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  hugene20stprobeset_db = derive2 { name="hugene20stprobeset.db"; version="8.5.0"; sha256="1bxhlz983ar0m72rlv3vyqkl9gyqkndyv896yyim09ah8hpln24k"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  hugene20sttranscriptcluster_db = derive2 { name="hugene20sttranscriptcluster.db"; version="8.5.0"; sha256="1cz6080w523j1dvbrgslkw1qs9bspci7086azz0xn4pmqjrkr78i"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  hugene21stprobeset_db = derive2 { name="hugene21stprobeset.db"; version="8.5.0"; sha256="0wcjldj9vxf73c2j9wmkra4kfd3n34yhicj53svgkcb2s9ldj8mq"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  hugene21sttranscriptcluster_db = derive2 { name="hugene21sttranscriptcluster.db"; version="8.5.0"; sha256="0ndcpkkqa5bq8g70bf1119vs1pj0hzkqlmm1bxy3zw86by06gass"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  human_db0 = derive2 { name="human.db0"; version="3.4.1"; sha256="0dpxa3ifmqsg63rzcz333iqkhg8hjipfyvl18899d11cxxcm9wh7"; depends=[AnnotationDbi]; };
+  hugene11stprobeset_db = derive2 { name="hugene11stprobeset.db"; version="8.7.0"; sha256="0nnq0mm04qlzfdslmwhjdww76h2zww4bdqfvs53580qzxnsbw2nl"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  hugene11sttranscriptcluster_db = derive2 { name="hugene11sttranscriptcluster.db"; version="8.7.0"; sha256="11m9nc1l4rm8mwsnkiak7wdh6593q5x982k7iva4id8qrafykddx"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  hugene20stprobeset_db = derive2 { name="hugene20stprobeset.db"; version="8.7.0"; sha256="047jc40r5z13xwxi1g64xvv8jkdx4k2xn53fqc87nm0qrcz4h1rm"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  hugene20sttranscriptcluster_db = derive2 { name="hugene20sttranscriptcluster.db"; version="8.7.0"; sha256="0ba3yvizj9ya61rr9ik2hdxhy0q67908x16n58jjjfq8wf96h7sp"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  hugene21stprobeset_db = derive2 { name="hugene21stprobeset.db"; version="8.7.0"; sha256="0chkxxpfl696qqiai3i30ylpsihyicbs0hbcni6nmnhfz9k5800g"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  hugene21sttranscriptcluster_db = derive2 { name="hugene21sttranscriptcluster.db"; version="8.7.0"; sha256="0wk2lg74zkgxh6frmikhk4bxndiyvc1j7mhvz65w8fxfqiwfyf5i"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  human_db0 = derive2 { name="human.db0"; version="3.5.0"; sha256="0n1qrah9h7n4cjpvhqrimcl42p413i2wmkw6iglqg1gcbkbrihvh"; depends=[AnnotationDbi]; };
   human1mduov3bCrlmm = derive2 { name="human1mduov3bCrlmm"; version="1.0.4"; sha256="1p7qpzk6svafgdafljhh4k0z7pcs78qmwwfd80r0a1yhkssmp0v9"; depends=[]; };
   human1mv1cCrlmm = derive2 { name="human1mv1cCrlmm"; version="1.0.3"; sha256="1qlph3qrjv52ddzlj8pwa93zzh70x4mbdrdr7q9pan427lpck9gx"; depends=[]; };
   human370quadv3cCrlmm = derive2 { name="human370quadv3cCrlmm"; version="1.0.3"; sha256="1chjx9vsmqz2whslw1l7jn7nfn7zx6pcjfmqqm9mh81i74rzrdik"; depends=[]; };
@@ -544,7 +516,7 @@ in with self; {
   m20kcod_db = derive2 { name="m20kcod.db"; version="3.4.0"; sha256="1p2sm5j4b50iqzwcb984qrh74c3hf6yml7b8mvxlhhhvxz4iy1np"; depends=[AnnotationDbi org_Mm_eg_db]; };
   maizecdf = derive2 { name="maizecdf"; version="2.18.0"; sha256="0yfz5gjhsq4wz6j63s1b1hxjz03gsmrlfs2cdc8smq6azp3zdid4"; depends=[AnnotationDbi]; };
   maizeprobe = derive2 { name="maizeprobe"; version="2.18.0"; sha256="01h5dv5i0zaqlphkii9ipxy9wswv1srgprrpr5vmi01c9d98qsk0"; depends=[AnnotationDbi]; };
-  malaria_db0 = derive2 { name="malaria.db0"; version="3.4.1"; sha256="041qsj8dkpavjs444v5fyhfzl7p6s2fx6ny16m36ak3g0w528bnf"; depends=[AnnotationDbi]; };
+  malaria_db0 = derive2 { name="malaria.db0"; version="3.5.0"; sha256="1q6m85ck84qg3fksmfmcrqd0s2yll9n6c3rcknh5ndmy30wdn9pl"; depends=[AnnotationDbi]; };
   medicagocdf = derive2 { name="medicagocdf"; version="2.18.0"; sha256="1clz679cc887x98c6jk93cphijkbg5r2nd9idrj5901yvh6p9n5q"; depends=[AnnotationDbi]; };
   medicagoprobe = derive2 { name="medicagoprobe"; version="2.18.0"; sha256="0w6j1pfkvb3npc8srpjifq2ywnqxhc9q090jqzmkx22x36cw9cl5"; depends=[AnnotationDbi]; };
   mgu74a_db = derive2 { name="mgu74a.db"; version="3.2.3"; sha256="0xd2gbvry061409kiwq99i13641g8x6m9kbgg4yr0x6m9dh7hxa8"; depends=[AnnotationDbi org_Mm_eg_db]; };
@@ -585,20 +557,20 @@ in with self; {
   moe430b_db = derive2 { name="moe430b.db"; version="3.2.3"; sha256="0hb6pa07j5hdirpprcm9vdszbh5bkgf38gyp3g0gqvlc32nklv58"; depends=[AnnotationDbi org_Mm_eg_db]; };
   moe430bcdf = derive2 { name="moe430bcdf"; version="2.18.0"; sha256="0yl5pkqj37188k2yvvsqhnhm2vx523r11sry976bwzcadlicfhvb"; depends=[AnnotationDbi]; };
   moe430bprobe = derive2 { name="moe430bprobe"; version="2.18.0"; sha256="1nziw3pj4picz0aazblpqkbw82wq3vdajh9i78yfvlz1bwb2vpfi"; depends=[AnnotationDbi]; };
-  moex10stprobeset_db = derive2 { name="moex10stprobeset.db"; version="8.5.0"; sha256="15i8fqp6r5q39pyhnpfqcwpqw4iar1yf9id391js0fbpz01n0hq1"; depends=[AnnotationDbi org_Mm_eg_db]; };
-  moex10sttranscriptcluster_db = derive2 { name="moex10sttranscriptcluster.db"; version="8.5.0"; sha256="0idxw02vyyspkbcd80al8h3l991v9n93d5cfag9f54hriz6ra5q8"; depends=[AnnotationDbi org_Mm_eg_db]; };
+  moex10stprobeset_db = derive2 { name="moex10stprobeset.db"; version="8.7.0"; sha256="18cgynzjvfwj65v06b0fmxk1b13jlpd7ljaif9hp74hk6hs6gha9"; depends=[AnnotationDbi org_Mm_eg_db]; };
+  moex10sttranscriptcluster_db = derive2 { name="moex10sttranscriptcluster.db"; version="8.7.0"; sha256="1nmswvrbh9awp2bk2lbklasng9m74d12yqhxy502wnlc8s18h482"; depends=[AnnotationDbi org_Mm_eg_db]; };
   mogene_1_0_st_v1frmavecs = derive2 { name="mogene.1.0.st.v1frmavecs"; version="1.1.0"; sha256="00lyakg7dhsm3jkh011mfq1vy439mds64zpm6fgyq592x3k9w2ah"; depends=[]; };
-  mogene10stprobeset_db = derive2 { name="mogene10stprobeset.db"; version="8.5.0"; sha256="08nc0qn8kn4nfsxv0nxyrs9d3rw4schgl1k9sfhav1a0zp9gak5a"; depends=[AnnotationDbi org_Mm_eg_db]; };
-  mogene10sttranscriptcluster_db = derive2 { name="mogene10sttranscriptcluster.db"; version="8.5.0"; sha256="005ahfhnhdxfivhwk1qifph9civ4411clq9h7km9m4ldn0bsg23r"; depends=[AnnotationDbi org_Mm_eg_db]; };
+  mogene10stprobeset_db = derive2 { name="mogene10stprobeset.db"; version="8.7.0"; sha256="1yxl29fpp37h2w3sq2v9lmiks4m9ip9hlmasisxmqd5cvs2wnpmj"; depends=[AnnotationDbi org_Mm_eg_db]; };
+  mogene10sttranscriptcluster_db = derive2 { name="mogene10sttranscriptcluster.db"; version="8.7.0"; sha256="1k96334hvb17kxfvgiwih3pp2474fdcck9yv3h9jaf2mbbzg2q6z"; depends=[AnnotationDbi org_Mm_eg_db]; };
   mogene10stv1cdf = derive2 { name="mogene10stv1cdf"; version="2.18.0"; sha256="1zhq08zsghck39ly7ymcjanzgw3xy1hqw435hwcrrlipv6i4lbmj"; depends=[AnnotationDbi]; };
   mogene10stv1probe = derive2 { name="mogene10stv1probe"; version="2.18.0"; sha256="1qjnsf6cv23gnqdpcy1xqxy807y91fnaiyh95hg99v932pvika6a"; depends=[AnnotationDbi]; };
-  mogene11stprobeset_db = derive2 { name="mogene11stprobeset.db"; version="8.5.0"; sha256="1zkhix305yn3s3a9bvngi62gcnmr516cr48i9mcfc4wm32vlvqwx"; depends=[AnnotationDbi org_Mm_eg_db]; };
-  mogene11sttranscriptcluster_db = derive2 { name="mogene11sttranscriptcluster.db"; version="8.5.0"; sha256="0ginnqn5p5gqha2w888i3v62qr1as4vfa3ffid3g6ylc7wr8q57c"; depends=[AnnotationDbi org_Mm_eg_db]; };
-  mogene20stprobeset_db = derive2 { name="mogene20stprobeset.db"; version="8.5.0"; sha256="1wlnbz5lycwpcj152yf683gvidymr9clyrq3sknkskdqkk6m0k11"; depends=[AnnotationDbi org_Mm_eg_db]; };
-  mogene20sttranscriptcluster_db = derive2 { name="mogene20sttranscriptcluster.db"; version="8.5.0"; sha256="1pk5z46pgj1fknknsl0cxpfmrnkss69c9apw5nxvg3kjm4m3zsyv"; depends=[AnnotationDbi org_Mm_eg_db]; };
-  mogene21stprobeset_db = derive2 { name="mogene21stprobeset.db"; version="8.5.0"; sha256="04j1ga7jfgp72pwa99p5yd7g4vk0k5964srdrpr7p9xi5664ac4r"; depends=[AnnotationDbi org_Mm_eg_db]; };
-  mogene21sttranscriptcluster_db = derive2 { name="mogene21sttranscriptcluster.db"; version="8.5.0"; sha256="175h9jaqjqhabxi3ydrmr8ykwyzw078frqj93p55b8gdwccbngzb"; depends=[AnnotationDbi org_Mm_eg_db]; };
-  mouse_db0 = derive2 { name="mouse.db0"; version="3.4.1"; sha256="1b03kqwpnwhnmv6x0cgn24qsl75hvcqmqpc1mlw8ms7hlbvaiijg"; depends=[AnnotationDbi]; };
+  mogene11stprobeset_db = derive2 { name="mogene11stprobeset.db"; version="8.7.0"; sha256="02lfkn65r4ylmjz1gy9qm63ia3javj601vm2yw06vpn9r0mkw74v"; depends=[AnnotationDbi org_Mm_eg_db]; };
+  mogene11sttranscriptcluster_db = derive2 { name="mogene11sttranscriptcluster.db"; version="8.7.0"; sha256="09fw9fsk0nqmyinhfjf8aqkfix7m7kjnf27xq85x4zf1vgbw2kl9"; depends=[AnnotationDbi org_Mm_eg_db]; };
+  mogene20stprobeset_db = derive2 { name="mogene20stprobeset.db"; version="8.7.0"; sha256="0a56rxqrv1vyykv8nmnq6682s3sxzwyrcjr29h585zy5w0gnvygp"; depends=[AnnotationDbi org_Mm_eg_db]; };
+  mogene20sttranscriptcluster_db = derive2 { name="mogene20sttranscriptcluster.db"; version="8.7.0"; sha256="1s7cdjglrc9qqf3gsmhsyycfa0h5qrbk28i4z3z4mb9g6242r1r4"; depends=[AnnotationDbi org_Mm_eg_db]; };
+  mogene21stprobeset_db = derive2 { name="mogene21stprobeset.db"; version="8.7.0"; sha256="0l8y2zbhykzqs9hbjhj1cys1mzdjhmi4rjv4l3v0sv5969h6sl96"; depends=[AnnotationDbi org_Mm_eg_db]; };
+  mogene21sttranscriptcluster_db = derive2 { name="mogene21sttranscriptcluster.db"; version="8.7.0"; sha256="1mkw3997mqr7ssa60zpwhlyajda51smcrnlnxwif78g99yj0nrxb"; depends=[AnnotationDbi org_Mm_eg_db]; };
+  mouse_db0 = derive2 { name="mouse.db0"; version="3.5.0"; sha256="1plw9bjk75qyn5lb2ybvwbq2hrq67fvx0mf2m4dhr88wlncfynl3"; depends=[AnnotationDbi]; };
   mouse4302_db = derive2 { name="mouse4302.db"; version="3.2.3"; sha256="1wdgqawqzkr39xwl32cap4ksr59p7r7i83g82h1ss4q3lm58gxpm"; depends=[AnnotationDbi org_Mm_eg_db]; };
   mouse4302cdf = derive2 { name="mouse4302cdf"; version="2.18.0"; sha256="1mpyma4x8zfs2fmmx57xw4cfs2cf9lhw71nc3icl72d7vmwidswc"; depends=[AnnotationDbi]; };
   mouse4302frmavecs = derive2 { name="mouse4302frmavecs"; version="1.5.0"; sha256="04clwkfz1gqqwrnqbavkka3hv480w6vi6c4q947qqnhw8j5jjp7s"; depends=[]; };
@@ -609,8 +581,8 @@ in with self; {
   mouse430a2probe = derive2 { name="mouse430a2probe"; version="2.18.0"; sha256="1f7a6mvcpv57h7kfj1qzkcwh7mdl2w9z6ysmrgan9037rd0652sz"; depends=[AnnotationDbi]; };
   mouseCHRLOC = derive2 { name="mouseCHRLOC"; version="2.1.6"; sha256="0xylgnz43xmjnqdwv7pn034wfs61va21lvcpn9igdik2s42ykpp2"; depends=[]; };
   mpedbarray_db = derive2 { name="mpedbarray.db"; version="3.2.3"; sha256="04pwchivzb19awnnqr9an0nl49rgdva58ip1fkgbavp3vlirxv4i"; depends=[AnnotationDbi org_Mm_eg_db]; };
-  mta10probeset_db = derive2 { name="mta10probeset.db"; version="8.5.0"; sha256="0k7mpqbd02hyc77kiacxzrq661bc27hdfj04lsdg2szm9ij14c11"; depends=[AnnotationDbi org_Mm_eg_db]; };
-  mta10transcriptcluster_db = derive2 { name="mta10transcriptcluster.db"; version="8.5.0"; sha256="1qbj0ac3xfbl0xw0xj4xix2spswgdp91qqqck8arlafpyacjc71b"; depends=[AnnotationDbi org_Mm_eg_db]; };
+  mta10probeset_db = derive2 { name="mta10probeset.db"; version="8.7.0"; sha256="1bszj4wx7x8x4vdy1np755nx4m94hqwx43mg3ymbjb1hwfjv2cdr"; depends=[AnnotationDbi org_Mm_eg_db]; };
+  mta10transcriptcluster_db = derive2 { name="mta10transcriptcluster.db"; version="8.7.0"; sha256="1vsv943xwn7y1ghw4bcyyywl4m4y0gsckdxkfyd8lg36b2gq08q9"; depends=[AnnotationDbi org_Mm_eg_db]; };
   mu11ksuba_db = derive2 { name="mu11ksuba.db"; version="3.2.3"; sha256="188ld7awcgrbqxkwqyr98739x4ihmcawv3lv2ybrc0khqifylzj3"; depends=[AnnotationDbi org_Mm_eg_db]; };
   mu11ksubacdf = derive2 { name="mu11ksubacdf"; version="2.18.0"; sha256="09xm3ah3zlssclblx663rlwrnmx3niabd5nf7zf7krhbpgcwhyim"; depends=[AnnotationDbi]; };
   mu11ksubaprobe = derive2 { name="mu11ksubaprobe"; version="2.18.0"; sha256="1p3kc06h83ivh06a8qqcbpgbsbdfp9nnwvqfxr6d1gdn15qcp96k"; depends=[AnnotationDbi]; };
@@ -635,28 +607,25 @@ in with self; {
   nugomm1a520177cdf = derive2 { name="nugomm1a520177cdf"; version="3.4.0"; sha256="0skd5b76si0vydzk5qhg4f1a1j655alxflm9sqci8fi8safwj96a"; depends=[AnnotationDbi]; };
   nugomm1a520177probe = derive2 { name="nugomm1a520177probe"; version="3.4.0"; sha256="1n70k0mhv146983myjgk1cgkr9rmmcpqdv8wpkcr320qcvgf9bn7"; depends=[AnnotationDbi]; };
   oligoData = derive2 { name="oligoData"; version="1.8.0"; sha256="1d1yfms3jv2c4s255xnh8yxwijrj35skw3nxds7l46y88lg3qn8y"; depends=[oligo]; };
-  org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.4.0"; sha256="1rp0pipdfwwacfnznj65di2xny8ccjdfll882jp73yrpk8x6g9w5"; depends=[AnnotationDbi]; };
-  org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.4.0"; sha256="0176yrpjxdn83nvqlp24ad65fwqdfwk010lmygl0anjgnskxb3y2"; depends=[AnnotationDbi]; };
-  org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.4.0"; sha256="1cazky0p9rj8islivfhrmqal4q39h9hiq48mpmycpkh8qrrl7nyy"; depends=[AnnotationDbi]; };
-  org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.4.0"; sha256="12llfzrrc09kj2wzbisdspv38qzkzgpsbn8kv7qkwg746k3pq436"; depends=[AnnotationDbi]; };
-  org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.4.0"; sha256="07h339h4vh9dwb6jdr7hczcc1bka5gibi5g7b97jlpykn5qzqjrx"; depends=[AnnotationDbi]; };
-  org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.4.0"; sha256="1vzbphbrh1cf7xi5cksia9xy9a9l42js2z2qsajvjxvddiphrb7j"; depends=[AnnotationDbi]; };
-  org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.4.0"; sha256="0c1q78gbqgv915daalsgmm58xxqw4zsd3xf99m9kzfv7qd11c0nk"; depends=[AnnotationDbi]; };
-  org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.4.0"; sha256="14bv6gbznmdf3yhz2r4pqfbxc5ql7h2wv6n5alyir1fyy1gdyf0m"; depends=[AnnotationDbi]; };
-  org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.4.0"; sha256="1cgb7fg0c7z3f7x17b0ir8zzgvi4k1d64ryqy9mmfk9bg5n1f9y1"; depends=[AnnotationDbi]; };
-  org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.4.0"; sha256="0swfc1krsfgjhxgkhdnhq4x5ikviixk0pyacvl7f20gbyqlgxpsf"; depends=[AnnotationDbi]; };
-  org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.4.0"; sha256="19mg64pw8zcvb9yxzzyf7caz1kvdrkfsj1hd84bzq7crrh8kc4y6"; depends=[AnnotationDbi]; };
-  org_Hs_ipi_db = derive2 { name="org.Hs.ipi.db"; version="1.3.0"; sha256="06nkcjcavzwgnxzmbj05i4dapszf2wq7m5s0g8d6hm7kxz5wxddy"; depends=[AnnotationDbi PAnnBuilder]; };
-  org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.4.0"; sha256="1lykjqjaf01fmgg3cvfcvwd5xjq6zc5vbxnm5r4l32fzvl89q50c"; depends=[AnnotationDbi]; };
-  org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.4.0"; sha256="0ba5z4fvv69bsw62wcx4smsz9fdlk01sql7scgi799ij9qzzd13v"; depends=[AnnotationDbi]; };
-  org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.4.0"; sha256="0miw8n5lqijfxw2q7lyxkp2srdf1rdfxyx8k87r279x23wxqgz12"; depends=[AnnotationDbi]; };
-  org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.4.0"; sha256="1dqj2japcbdqkisdla6aca4cjf4hbigf4gb2gn8abx5n1di0h2pi"; depends=[AnnotationDbi]; };
-  org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.4.0"; sha256="04az0yf3ngrz7nlbmmy9k97i9i8gf4dxbmgvd03vrv59y0x47m11"; depends=[AnnotationDbi]; };
-  org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.4.0"; sha256="01zc0kx0jrmcwly4bb3cy69x3zm7mkrffzx720mwphn61gzngz3z"; depends=[AnnotationDbi]; };
-  org_Sco_eg_db = derive2 { name="org.Sco.eg.db"; version="2.4.2"; sha256="1ppjl55059gk9jbh8c8xbsn2jlqz1hm650vm9gxnbd8hpnk63vgz"; depends=[AnnotationDbi]; };
-  org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.4.0"; sha256="17j0lvwp212zaxw5dx8488884v6b7l4hhzn2d14wisf8s3w1djig"; depends=[AnnotationDbi]; };
-  org_Tgondii_eg_db = derive2 { name="org.Tgondii.eg.db"; version="1.0"; sha256="1vq3qbk6jswfffj5lfwsic71h8ga7a6gqf6wfa7qcda3gvfhnwlc"; depends=[AnnotationDbi]; };
-  org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.4.0"; sha256="1sbzmnxi9gvq3x86w6jw49qgzd7g58ilh1xmnvr840pz50b3n8j6"; depends=[AnnotationDbi]; };
+  org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.5.0"; sha256="0dzd281yi2vikzr4civf38wy8gpsdr9k2ks9j6sa2rnsnpf1hnh9"; depends=[AnnotationDbi]; };
+  org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.5.0"; sha256="1vpzciar4lwq5r8faz1mh9y085i71q0gcxz5c2gn9469qbi5ymmp"; depends=[AnnotationDbi]; };
+  org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.5.0"; sha256="1qcl4px85qhim5nndj4j1ajyvby8ldbr0g0pml2q54wnjs9f8a8f"; depends=[AnnotationDbi]; };
+  org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.5.0"; sha256="02ggchixlmzywhsbr0h2ms4dravv7m5964cjxqcjxqs16vjwlbk9"; depends=[AnnotationDbi]; };
+  org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.5.0"; sha256="0rdiffd9v6g6cwrd23jspj0bxyds9l977pv27azagw1f7bkdqgbk"; depends=[AnnotationDbi]; };
+  org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.5.0"; sha256="033qak1d3wwz17va0bh8z8p8arx0aw2va6gm1qfwsvdkj9cd9d7d"; depends=[AnnotationDbi]; };
+  org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.5.0"; sha256="0854rqanjzscvlq7rj6bvlxcfyhwiqwi4lnw7abzvv0zcwvf07i0"; depends=[AnnotationDbi]; };
+  org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.5.0"; sha256="0cydh8rj9r2g6wzs42sh6cf77fs0nrgww4jsy3x61aa0b8lngjxj"; depends=[AnnotationDbi]; };
+  org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.5.0"; sha256="00s7p7wrjd57wvwxyhb2m603kms2pm67rr3m83dp2s0pa4ffggmr"; depends=[AnnotationDbi]; };
+  org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.5.0"; sha256="1q5g9ka4fxjq5jp0mg6x8j44995y2r9hvs91qaan8xcmsa900q3q"; depends=[AnnotationDbi]; };
+  org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.5.0"; sha256="1v6wa5613cjq59xd7x1qz8lr9nb2abm9abl2cci1khrnrlpla927"; depends=[AnnotationDbi]; };
+  org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.5.0"; sha256="11q21p3ki4bn4hb3aix0g775l45l66jmas6m94nfhqqnpjhv4d6g"; depends=[AnnotationDbi]; };
+  org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.5.0"; sha256="13ia5ipyif6cxj4gmw4jl0j84iwj4289k69qgfm6qsw4xdc8amln"; depends=[AnnotationDbi]; };
+  org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.5.0"; sha256="08pldh0j1z9csbyzxn89xk9ir1av1dd4jbh79l04g4s34x13m8l8"; depends=[AnnotationDbi]; };
+  org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.5.0"; sha256="1sbimln1v575pxzsgx4sw5712nwfy8n188limrnhwg7brj893wrl"; depends=[AnnotationDbi]; };
+  org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.5.0"; sha256="11vnia08kblh3v4jypl6sw94p1n6702zskxj0gv4ijygaq61m5x4"; depends=[AnnotationDbi]; };
+  org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.5.0"; sha256="1h3wa5g65hg9fdg722w520gb6c16zgccg62vxgd37gj9bdnywg5w"; depends=[AnnotationDbi]; };
+  org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.5.0"; sha256="1wizm4dx6an2pfi322aykis41a6skhgv8yjyfl2pdi0kizlvw26c"; depends=[AnnotationDbi]; };
+  org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.5.0"; sha256="1rhz86d0ly7z79pbaf7s8kw1sx9ys8bawfrcgs33km2dd2cgzzi0"; depends=[AnnotationDbi]; };
   paeg1acdf = derive2 { name="paeg1acdf"; version="2.18.0"; sha256="127pgxxp5wp3hgmafbzdzsk4gqnllq1m1gcsfyzkvpkvmbn4aa9n"; depends=[AnnotationDbi]; };
   paeg1aprobe = derive2 { name="paeg1aprobe"; version="2.18.0"; sha256="0hbyd402wf9nzy2g93nhnf2zsi9jvhgfk0llxlyfk0kqxs0y4byy"; depends=[AnnotationDbi]; };
   pd_081229_hg18_promoter_medip_hx1 = derive2 { name="pd.081229.hg18.promoter.medip.hx1"; version="0.99.4"; sha256="1h4925dmw0vfsnhllg55gswq3sxfmx9rcjzifdvgs9y27399psrr"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite]; };
@@ -830,10 +799,10 @@ in with self; {
   pd_zebrafish = derive2 { name="pd.zebrafish"; version="3.12.0"; sha256="0gg7y7w51pv0vf39qzyaf09wl3vxy222nr69zgxg7cylwxmaky7v"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; };
   pedbarrayv10_db = derive2 { name="pedbarrayv10.db"; version="3.2.3"; sha256="01sn7qh5r2c2ph7gqirlzlplxscsmczf7ajffd9rsx59932f71kx"; depends=[AnnotationDbi org_Hs_eg_db]; };
   pedbarrayv9_db = derive2 { name="pedbarrayv9.db"; version="3.2.3"; sha256="0x9m9m4nmdhc0j5244avmlfwljcpw0sh44l1b00cx05swi3vmjlp"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  phastCons100way_UCSC_hg19 = derive2 { name="phastCons100way.UCSC.hg19"; version="3.4.0"; sha256="1xkrm9s3x301g8kf0p60dcgx3irmsl8jfaayxbw3zgfyyr0nb1mw"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; };
-  phastCons100way_UCSC_hg38 = derive2 { name="phastCons100way.UCSC.hg38"; version="3.4.0"; sha256="0d99mmih14s7mw0qsp2izdhi6fc59aamz160p0p9jpfbd8v4fz0g"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; };
-  phastCons7way_UCSC_hg38 = derive2 { name="phastCons7way.UCSC.hg38"; version="3.4.0"; sha256="0r0wb1yj0ahkhql45n4jcqc2jgac5nshrjk3vn0w8sn80mxzialj"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; };
-  pig_db0 = derive2 { name="pig.db0"; version="3.4.1"; sha256="1rkkbxk33nj8n2cijsh109xa49dw3b8hj05h396z0g6k2rflkxhx"; depends=[AnnotationDbi]; };
+  phastCons100way_UCSC_hg19 = derive2 { name="phastCons100way.UCSC.hg19"; version="3.6.0"; sha256="09gnsrv37pzpbyx98vjcsi1kavazz4hkf7r48dggdad9lqg0fqnm"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; };
+  phastCons100way_UCSC_hg38 = derive2 { name="phastCons100way.UCSC.hg38"; version="3.6.0"; sha256="1g0yd623sb73h3nf1mszchiyw5mk4dlz2h7mqix9d8xdsqmrc81l"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; };
+  phastCons7way_UCSC_hg38 = derive2 { name="phastCons7way.UCSC.hg38"; version="3.6.0"; sha256="1p2kx6zrgc9yzkvmizzrlhhc75mnxpjgslpxm3kcmvsg12qd4zmz"; depends=[BSgenome GenomicRanges GenomicScores IRanges S4Vectors]; };
+  pig_db0 = derive2 { name="pig.db0"; version="3.5.0"; sha256="0xga9i0bicxbbc9rypwjw376qqg401smwwqjgkdgf4i5lrds0xi7"; depends=[AnnotationDbi]; };
   plasmodiumanophelescdf = derive2 { name="plasmodiumanophelescdf"; version="2.18.0"; sha256="1vs36091djinn3g6rjhmy9xfdyi58365zbcjc9mf50adnp2i5fq9"; depends=[AnnotationDbi]; };
   plasmodiumanophelesprobe = derive2 { name="plasmodiumanophelesprobe"; version="2.18.0"; sha256="03hfq51nrpmx8ihc48jiih6bk99irrgal9x7i7mgcv8xd508gcsy"; depends=[AnnotationDbi]; };
   poplarcdf = derive2 { name="poplarcdf"; version="2.18.0"; sha256="0j28czs936j2wgwp63qbwl1mjcflcrx7ir88jzxkkw7411ch1gl1"; depends=[AnnotationDbi]; };
@@ -850,26 +819,26 @@ in with self; {
   rae230b_db = derive2 { name="rae230b.db"; version="3.2.3"; sha256="0rjs9lijabhxfrs6m9qri7a1c10zm1mxqx7bbip366cw069f5dx4"; depends=[AnnotationDbi org_Rn_eg_db]; };
   rae230bcdf = derive2 { name="rae230bcdf"; version="2.18.0"; sha256="1j2i49cp042nk3rkf8q6gxcnwd5cihz1nyg8r6yndkja51r41pi8"; depends=[AnnotationDbi]; };
   rae230bprobe = derive2 { name="rae230bprobe"; version="2.18.0"; sha256="1smqs93fks4rd5g9kk7cacnpsnj4rjr0d6fl2i01mdiihfi3csny"; depends=[AnnotationDbi]; };
-  raex10stprobeset_db = derive2 { name="raex10stprobeset.db"; version="8.5.0"; sha256="15i8inp73n8acjrs6z0hk88lgzjrcqd9vr5cv4vnsdzmzbnhrxdd"; depends=[AnnotationDbi org_Rn_eg_db]; };
-  raex10sttranscriptcluster_db = derive2 { name="raex10sttranscriptcluster.db"; version="8.5.0"; sha256="1r0rg2ifiswbf5a2zahm9823vnahii9s2vrhprbj87rbl7wm19xl"; depends=[AnnotationDbi org_Rn_eg_db]; };
-  ragene10stprobeset_db = derive2 { name="ragene10stprobeset.db"; version="8.5.0"; sha256="0zywhbxajqcmfl90r95r2ghas4zrla92rjc5qa7vf57cas40pk1s"; depends=[AnnotationDbi org_Rn_eg_db]; };
-  ragene10sttranscriptcluster_db = derive2 { name="ragene10sttranscriptcluster.db"; version="8.5.0"; sha256="1wiichdhfi20lav0vqi80jw0k8i6pbsrdlark8x397sn1acynn3q"; depends=[AnnotationDbi org_Rn_eg_db]; };
+  raex10stprobeset_db = derive2 { name="raex10stprobeset.db"; version="8.7.0"; sha256="1i5f6ygg3jq6msqacd1npnvcb3pp5a1c95na7rdd3818h27pj4vf"; depends=[AnnotationDbi org_Rn_eg_db]; };
+  raex10sttranscriptcluster_db = derive2 { name="raex10sttranscriptcluster.db"; version="8.7.0"; sha256="18y7fkpg34d18xczc5xz5hcigfkd4fxzlhd1cvfadxjhjyaj5fhk"; depends=[AnnotationDbi org_Rn_eg_db]; };
+  ragene10stprobeset_db = derive2 { name="ragene10stprobeset.db"; version="8.7.0"; sha256="0ignrscm098xpnrp60lhnakgh4rwypzk6a5nh7miacxbs2mcy1lr"; depends=[AnnotationDbi org_Rn_eg_db]; };
+  ragene10sttranscriptcluster_db = derive2 { name="ragene10sttranscriptcluster.db"; version="8.7.0"; sha256="12w77ajis8ll25knmjm8cvnxjlgpj6n7j66lmww21y7dvg33gwlr"; depends=[AnnotationDbi org_Rn_eg_db]; };
   ragene10stv1cdf = derive2 { name="ragene10stv1cdf"; version="2.18.0"; sha256="0fm2yj6nn3v1wiscjb53hm4ylh5cgxvs7qgc9sbsbpv7agr0bzng"; depends=[AnnotationDbi]; };
   ragene10stv1probe = derive2 { name="ragene10stv1probe"; version="2.18.0"; sha256="0cb3a908hixcakl41ay4yyfm9r97ln8gjidn4rs1hr7qaplfj1mh"; depends=[AnnotationDbi]; };
-  ragene11stprobeset_db = derive2 { name="ragene11stprobeset.db"; version="8.5.0"; sha256="1qsrj2r0j4819rx2m6ahxz8fhpwz5cv6srysl585igipjy1caq43"; depends=[AnnotationDbi org_Rn_eg_db]; };
-  ragene11sttranscriptcluster_db = derive2 { name="ragene11sttranscriptcluster.db"; version="8.5.0"; sha256="17np61fr5n545ilr4xlwsc559ni7rc38ns67x41lj6gnaz8cpmiy"; depends=[AnnotationDbi org_Rn_eg_db]; };
-  ragene20stprobeset_db = derive2 { name="ragene20stprobeset.db"; version="8.5.0"; sha256="08g7wnfmxai9klscb7yywj6p8yfnid8px3qqwkn2s2r1iwi46azg"; depends=[AnnotationDbi org_Rn_eg_db]; };
-  ragene20sttranscriptcluster_db = derive2 { name="ragene20sttranscriptcluster.db"; version="8.5.0"; sha256="09qcsbhl81j4wiz90fw6ldy97x821w72wywqik6rrsw1qhyaizkg"; depends=[AnnotationDbi org_Rn_eg_db]; };
-  ragene21stprobeset_db = derive2 { name="ragene21stprobeset.db"; version="8.5.0"; sha256="15920i2wdyn5j0gn8nxdv1dvwhkmh1swzkazj5zqrg304xhrv1ki"; depends=[AnnotationDbi org_Rn_eg_db]; };
-  ragene21sttranscriptcluster_db = derive2 { name="ragene21sttranscriptcluster.db"; version="8.5.0"; sha256="08gzlnbng7vhc3kw72lvrzp8f6799vr8b4c4vkdzwsrhd4hs60hf"; depends=[AnnotationDbi org_Rn_eg_db]; };
-  rat_db0 = derive2 { name="rat.db0"; version="3.4.1"; sha256="0zzf91wbincgp75mwjx6q13xayb46giqv8vrz1wx8pmw2halqiy4"; depends=[AnnotationDbi]; };
+  ragene11stprobeset_db = derive2 { name="ragene11stprobeset.db"; version="8.7.0"; sha256="0cc6cch0r2dlk689gsphcsf5ikbgyczslmq7r20q1cvgqxbzj6kp"; depends=[AnnotationDbi org_Rn_eg_db]; };
+  ragene11sttranscriptcluster_db = derive2 { name="ragene11sttranscriptcluster.db"; version="8.7.0"; sha256="195dx0splkvdwqn4h6nvmm3zd0sv3vhcjz1bp1qxgi6d5iakvkry"; depends=[AnnotationDbi org_Rn_eg_db]; };
+  ragene20stprobeset_db = derive2 { name="ragene20stprobeset.db"; version="8.7.0"; sha256="1p8qiqwxpkq2784ixzdd9pq38nrb4x8qwfmk5alr225br4vv0k2q"; depends=[AnnotationDbi org_Rn_eg_db]; };
+  ragene20sttranscriptcluster_db = derive2 { name="ragene20sttranscriptcluster.db"; version="8.7.0"; sha256="135cgn92raa6f9yiw4k25rn04rpg5mdnf969l66x4s1jcc0rwscq"; depends=[AnnotationDbi org_Rn_eg_db]; };
+  ragene21stprobeset_db = derive2 { name="ragene21stprobeset.db"; version="8.7.0"; sha256="0lp4prymrm3cp8yq1hba9bylw22hcvlx7piqpvjx51hj79yrwdig"; depends=[AnnotationDbi org_Rn_eg_db]; };
+  ragene21sttranscriptcluster_db = derive2 { name="ragene21sttranscriptcluster.db"; version="8.7.0"; sha256="1b7s2r4w1yy2v3srs6n931zc64qf58nq4apmq2ag5nx50wspima1"; depends=[AnnotationDbi org_Rn_eg_db]; };
+  rat_db0 = derive2 { name="rat.db0"; version="3.5.0"; sha256="09kbsaksmas6avcdlvbg6kvdw6cf156i7qip9l0mhv6qyqhl0p36"; depends=[AnnotationDbi]; };
   rat2302_db = derive2 { name="rat2302.db"; version="3.2.3"; sha256="0vj4vkx091m34xqjh6gv6m2iqszvn5rq3kvnpyq3fin5v42wrsr1"; depends=[AnnotationDbi org_Rn_eg_db]; };
   rat2302cdf = derive2 { name="rat2302cdf"; version="2.18.0"; sha256="1748rc6yypd7y8wgr1qg632pcsxx0fkxjz6b3z4fhblgdllhy9wk"; depends=[AnnotationDbi]; };
   rat2302probe = derive2 { name="rat2302probe"; version="2.18.0"; sha256="1zwjgbcb9d4ib6z1iyjz8x11lq0b5gqs08y6j3idb5wf3i2p521v"; depends=[AnnotationDbi]; };
   ratCHRLOC = derive2 { name="ratCHRLOC"; version="2.1.6"; sha256="0mgk6lwvvdwjzjh4r1q1q6nfnx4vqx9iy6gmbrb9f31jf30hqnsb"; depends=[]; };
   rattoxfxcdf = derive2 { name="rattoxfxcdf"; version="2.18.0"; sha256="0q84lfaxnnj2zbm5q8xswa1md15fjj4i0djnqr835ixzn7px4yqn"; depends=[AnnotationDbi]; };
   rattoxfxprobe = derive2 { name="rattoxfxprobe"; version="2.18.0"; sha256="1kp159553rkcn9yh6x3yph3yjz2ja21wi9j5ax03qnhwlsl1x8ik"; depends=[AnnotationDbi]; };
-  reactome_db = derive2 { name="reactome.db"; version="1.58.0"; sha256="191bz92rr446g8w4m4wr9c51ykfqaj65vp7adb56wch7r8llawrl"; depends=[AnnotationDbi]; };
+  reactome_db = derive2 { name="reactome.db"; version="1.62.0"; sha256="097na9ms80lxpc4qaagaqlxs7kjsjpkq649f2jqbav0mkph52bdh"; depends=[AnnotationDbi]; };
   rgu34a_db = derive2 { name="rgu34a.db"; version="3.2.3"; sha256="1s2sd5bqlj4qhamhrnb9byxn8nc7z265mqy7zzkgxcd6a2k472vp"; depends=[AnnotationDbi org_Rn_eg_db]; };
   rgu34acdf = derive2 { name="rgu34acdf"; version="2.18.0"; sha256="08z9f16xp1m2mwl9vlmbffxl4zyyl8cgzf6wp66rrm32lvl0nbwq"; depends=[AnnotationDbi]; };
   rgu34aprobe = derive2 { name="rgu34aprobe"; version="2.18.0"; sha256="1gjxyq9128jgv3ic386f84rajgf3wz7yi2dja80y0ff4m0a48dlh"; depends=[AnnotationDbi]; };
@@ -883,7 +852,7 @@ in with self; {
   rgug4105a_db = derive2 { name="rgug4105a.db"; version="3.2.3"; sha256="0lq8k95qm0q7j65nf16p3f09dn9zs87n3k561wxrgi2lb0pf6j40"; depends=[AnnotationDbi org_Rn_eg_db]; };
   rgug4130a_db = derive2 { name="rgug4130a.db"; version="3.2.3"; sha256="0zlcn9spw23bj3px9z1l2f5afn09zbr6rv0nbd2h6dd12wrvy1zk"; depends=[AnnotationDbi org_Rn_eg_db]; };
   rgug4131a_db = derive2 { name="rgug4131a.db"; version="3.2.3"; sha256="1r272jf9cflf1yf4bznp4d59h7bd7adh1i3rf890h5ffc0xzf5cq"; depends=[AnnotationDbi org_Rn_eg_db]; };
-  rhesus_db0 = derive2 { name="rhesus.db0"; version="3.4.1"; sha256="16p3zsx6sr466xzf0yd667an21br21n13agacsysf9g1vw4gc7cx"; depends=[AnnotationDbi]; };
+  rhesus_db0 = derive2 { name="rhesus.db0"; version="3.5.0"; sha256="09i0f2ddss092awdmhshnndniyy3pzfj56nfbkgrj0y22lgfw875"; depends=[AnnotationDbi]; };
   rhesuscdf = derive2 { name="rhesuscdf"; version="2.18.0"; sha256="0q2alkxm80wkzaf0q80df27q30qkswybavz05x6ywsihbs9h0nb8"; depends=[AnnotationDbi]; };
   rhesusprobe = derive2 { name="rhesusprobe"; version="2.18.0"; sha256="0fd8pvwvpcmx41k80nbccjxllh39fvjf7l9dr8facisl1x7gsfil"; depends=[AnnotationDbi]; };
   ri16cod_db = derive2 { name="ri16cod.db"; version="3.4.0"; sha256="1xz533vxjdyxx1wkks0kgk6b90sxs44iqcsvyds0xcm573bx8c6q"; depends=[AnnotationDbi org_Rn_eg_db]; };
@@ -892,8 +861,8 @@ in with self; {
   rnu34_db = derive2 { name="rnu34.db"; version="3.2.3"; sha256="0ahridq75rmjyaivmlhn428wg712zv3003cbzzrajm9w6nibbfgk"; depends=[AnnotationDbi org_Rn_eg_db]; };
   rnu34cdf = derive2 { name="rnu34cdf"; version="2.18.0"; sha256="1snb89530zxdbsfs1vgw30b1wdc5sdr1q46bmvz5m9g57gyficr0"; depends=[AnnotationDbi]; };
   rnu34probe = derive2 { name="rnu34probe"; version="2.18.0"; sha256="1rzjha1v453fxiwqs2zgwcbrvz6w96biz2jny0hrh5s86d5f6xpb"; depends=[AnnotationDbi]; };
-  rta10probeset_db = derive2 { name="rta10probeset.db"; version="8.5.0"; sha256="039klpv3v3npb9i9pw4sjh2jwyv8ffk83360h41lxmmy17fdzlmh"; depends=[AnnotationDbi org_Rn_eg_db]; };
-  rta10transcriptcluster_db = derive2 { name="rta10transcriptcluster.db"; version="8.5.0"; sha256="0q0szasa6c1klhhzdp08sv598m7njf1xql9h710xajbyksq0accy"; depends=[AnnotationDbi org_Rn_eg_db]; };
+  rta10probeset_db = derive2 { name="rta10probeset.db"; version="8.7.0"; sha256="02hcq8zflfixiqwsjr7bsllcqh3hh910n00hzlqry07mwwxbv356"; depends=[AnnotationDbi org_Rn_eg_db]; };
+  rta10transcriptcluster_db = derive2 { name="rta10transcriptcluster.db"; version="8.7.0"; sha256="1al9npm4skccr7369gpg0hxsw3nmngsl6z06c27n3ymdavsd2dyj"; depends=[AnnotationDbi org_Rn_eg_db]; };
   rtu34_db = derive2 { name="rtu34.db"; version="3.2.3"; sha256="119l36gbzdi52na2lkjbpb5r2d9pp5rz2zpzfj7isw07an6h8wmh"; depends=[AnnotationDbi org_Rn_eg_db]; };
   rtu34cdf = derive2 { name="rtu34cdf"; version="2.18.0"; sha256="10f5wnvk820c8brl2qqs7mv6jcn1v6pmz680kvlpyz9s2sz16936"; depends=[AnnotationDbi]; };
   rtu34probe = derive2 { name="rtu34probe"; version="2.18.0"; sha256="0mcp9lmc65j3ds73gyak72pkshnx6km0d2cm324yaxlp9bqzfchw"; depends=[AnnotationDbi]; };
@@ -920,8 +889,8 @@ in with self; {
   vitisviniferaprobe = derive2 { name="vitisviniferaprobe"; version="2.18.0"; sha256="1ggz1s37dwvrkhj4vx2civyhap7bgqsshy33lk14z4fjsayfi39a"; depends=[AnnotationDbi]; };
   wheatcdf = derive2 { name="wheatcdf"; version="2.18.0"; sha256="1gmbrdilqvm54h6nkb1cm01ki8aipiywd4qj8gpwlm2hqrimr8kr"; depends=[AnnotationDbi]; };
   wheatprobe = derive2 { name="wheatprobe"; version="2.18.0"; sha256="1fifi3pvzdrg356idwz0kx7qlf5mssdxlyvwpn3cjgw0z7n7cnw8"; depends=[AnnotationDbi]; };
-  worm_db0 = derive2 { name="worm.db0"; version="3.4.1"; sha256="0r76ck6b2zkf38z59n9m3frc2d6v27frrbryvyk6lv4bnnwa1p2n"; depends=[AnnotationDbi]; };
-  xenopus_db0 = derive2 { name="xenopus.db0"; version="3.4.1"; sha256="0953cf597hxd2h28p7bqrv5xxs96y3bxr4x1hp8bm1v0l8l37d13"; depends=[AnnotationDbi]; };
+  worm_db0 = derive2 { name="worm.db0"; version="3.5.0"; sha256="05r29cqswz3ph3adymdigayv5ci19cd02y26kjbgwrh38xha5cg0"; depends=[AnnotationDbi]; };
+  xenopus_db0 = derive2 { name="xenopus.db0"; version="3.5.0"; sha256="136yrk7qlbzy717xy1abpn5l42j0qzal72y0p20wwxw60xhpx1rv"; depends=[AnnotationDbi]; };
   xenopuslaeviscdf = derive2 { name="xenopuslaeviscdf"; version="2.18.0"; sha256="1bcz1hr7gxw6ac4qvw0giph6hfcf5i9b11s274ypq512qc1d32iq"; depends=[AnnotationDbi]; };
   xenopuslaevisprobe = derive2 { name="xenopuslaevisprobe"; version="2.18.0"; sha256="0prb14zn2gvgxq8w0y21x1ng51cn3bgjhkppf7zkmnq1xkzvq0pw"; depends=[AnnotationDbi]; };
   xlaevis_db = derive2 { name="xlaevis.db"; version="3.2.3"; sha256="0cdi71c8pflb8n4yfxc0wmfi51w6z0dlz7nw5hv0hkx547v79d53"; depends=[AnnotationDbi org_Xl_eg_db]; };
@@ -933,7 +902,7 @@ in with self; {
   ye6100subbcdf = derive2 { name="ye6100subbcdf"; version="2.18.0"; sha256="1169hv56981b915rlr5w5sn6ppyjd8as7f4k1hbjzadrdrl3glwp"; depends=[AnnotationDbi]; };
   ye6100subccdf = derive2 { name="ye6100subccdf"; version="2.18.0"; sha256="0mhr4zd33gfvvivc17k7fb6nvmhq6h3q0xbx2zl09zd6qk09kizm"; depends=[AnnotationDbi]; };
   ye6100subdcdf = derive2 { name="ye6100subdcdf"; version="2.18.0"; sha256="11b1fflgc34lrj4yf1p7way5n83cm9c7znsbxpzlwddwyy8qib30"; depends=[AnnotationDbi]; };
-  yeast_db0 = derive2 { name="yeast.db0"; version="3.4.1"; sha256="0d9p474891jshxynmwa63xg7kb01s6vb1dll3hns9ps0bpm6d8r3"; depends=[AnnotationDbi]; };
+  yeast_db0 = derive2 { name="yeast.db0"; version="3.5.0"; sha256="00rp099g5302hy4g4h6j11nslc2j6p58ax80mnswhzvfr37sb99f"; depends=[AnnotationDbi]; };
   yeast2_db = derive2 { name="yeast2.db"; version="3.2.3"; sha256="1xns0129ifklipbardybkjyxfwnlklavq0k6s15wk2iwk7vxa33s"; depends=[AnnotationDbi org_Sc_sgd_db]; };
   yeast2cdf = derive2 { name="yeast2cdf"; version="2.18.0"; sha256="0c68val9x8bfnv4xx0vag9dxwsx5q8dzbj0dpha3nshh12jw48w9"; depends=[AnnotationDbi]; };
   yeast2probe = derive2 { name="yeast2probe"; version="2.18.0"; sha256="125nif693qcmxc0nnnz917f9avggcdr8g9rfvx2qdc54a2l7vdb7"; depends=[AnnotationDbi]; };
@@ -942,7 +911,7 @@ in with self; {
   ygs98frmavecs = derive2 { name="ygs98frmavecs"; version="1.3.0"; sha256="1xrm1209xnknwvad7nvg1a0mbxz15z12yd4x5bia3cq03zcmzf9m"; depends=[]; };
   ygs98probe = derive2 { name="ygs98probe"; version="2.18.0"; sha256="0awf6z4j2vb2jk9a9j2r512yd3m31660y68pasa9mp488m270a3q"; depends=[AnnotationDbi]; };
   zebrafish_db = derive2 { name="zebrafish.db"; version="3.2.3"; sha256="1n6p04hlm5c32fnficx294s7n7izy5460avagw8hx1g5xryhdzqk"; depends=[AnnotationDbi org_Dr_eg_db]; };
-  zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.4.1"; sha256="12a1qk7wjjsclrj2nbf02hwk9pakzkgzgy4l2893bnwyf0c30ffb"; depends=[AnnotationDbi]; };
+  zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.5.0"; sha256="1mkyhf1vz0n98zs941v5f7nl0cg0s873ny3m6vdpj5c9nyqc8hxs"; depends=[AnnotationDbi]; };
   zebrafishcdf = derive2 { name="zebrafishcdf"; version="2.18.0"; sha256="0sq1xqhblbilvaiabhqyl9gxdj3jg576vgq8v0cls1zvvx0isrx0"; depends=[AnnotationDbi]; };
   zebrafishprobe = derive2 { name="zebrafishprobe"; version="2.18.0"; sha256="1pb8z2rdhq11hq391xyi236scyafbp56kbhhwsnha36yygz5drw0"; depends=[AnnotationDbi]; };
 }
diff --git a/pkgs/development/r-modules/bioc-experiment-packages.nix b/pkgs/development/r-modules/bioc-experiment-packages.nix
index fe446610c4eb..220ac60486b8 100644
--- a/pkgs/development/r-modules/bioc-experiment-packages.nix
+++ b/pkgs/development/r-modules/bioc-experiment-packages.nix
@@ -4,314 +4,332 @@
 # Rscript generate-r-packages.R bioc-experiment >new && mv new bioc-experiment-packages.nix
 
 { self, derive }:
-let derive2 = derive { rVersion = "3.4"; };
+let derive2 = derive { biocVersion = "3.6"; };
 in with self; {
-  ABAData = derive2 { name="ABAData"; version="1.4.0"; sha256="1xlr9ps6s6xy95wh4c0m09rl2hkp9rms2gbfgsf0y46j1jak4ick"; depends=[]; };
-  ALL = derive2 { name="ALL"; version="1.16.0"; sha256="01b0ksakw06l8q9a1ihb56sm0p8v78d2n4aji8yj1nnfi2kcgr3m"; depends=[Biobase]; };
-  ALLMLL = derive2 { name="ALLMLL"; version="1.14.0"; sha256="1hza3ckxlc9k6mrdxc94r8yrsnj51ywcpinslrfyhanibrjvi8yc"; depends=[affy]; };
-  ARRmData = derive2 { name="ARRmData"; version="1.10.0"; sha256="0f5my7jbp0x8r7hcj5rvnfa3swxh39apfby7rlqmkznr175jmsa8"; depends=[]; };
-  Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.10.0"; sha256="038yspp7l837i8lqv99alj1jsb51b27c84m4nvglpy3pzwvbqda7"; depends=[]; };
-  Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.8.0"; sha256="070iv3jschvz36fa6q8d4s6prlbmwj4m07f69yhfv4mlb30nz6gk"; depends=[]; };
-  Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.12.0"; sha256="1z6bn6sqdqd152gn2bzppy6g57n281mwmp5vvv901mb3w1i3yvgl"; depends=[]; };
-  AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.12.0"; sha256="0dqbf9rvha6cq0ipf9rjwx6akmcapsrh1k2p5kws3i0i2nw2kr3v"; depends=[]; };
-  Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.12.0"; sha256="1yx8pri6zdvv4hr4w43axb10d1y2bmqfp5mhhn9j286wxal7qgh0"; depends=[]; };
-  AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.14.0"; sha256="0prmpqyklxl47wna3kdh27bnrw9saa0s48xidmybs1nzgvizs5s4"; depends=[affy]; };
-  AneuFinderData = derive2 { name="AneuFinderData"; version="1.2.0"; sha256="1bcr57mpvvxlryrhcpwzagv9gdirhfdmyc4rsv6giixqsj2d2m9v"; depends=[]; };
-  AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.4.0"; sha256="0hc5zqdajra3qy76z65qccllksz268vpnrn35232zp6w3i1zljx6"; depends=[]; };
-  BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.12.0"; sha256="1dvy6bg0949cx12smpzkndh1mq32jy0hfq7aaiixziqbxb32gggm"; depends=[beadarray GEOquery limma]; };
-  CCl4 = derive2 { name="CCl4"; version="1.12.0"; sha256="19f1zmicl6i90l11sq6ly9913v2913s37c5jz5341p822shf8knz"; depends=[Biobase limma]; };
-  CLL = derive2 { name="CLL"; version="1.14.0"; sha256="078avwbs42nnaqxa1k4769rgxign1xmwv2s1irjgd9dkxqq2ha0n"; depends=[affy Biobase]; };
-  COHCAPanno = derive2 { name="COHCAPanno"; version="1.10.0"; sha256="1jf4wrbwbzbn4rwjkn936zg1cddd1s96a8m8r9bx2z2zm49vc5bp"; depends=[]; };
-  CONFESSdata = derive2 { name="CONFESSdata"; version="1.2.0"; sha256="0p8v2qxg2hj1q3r8pwpp46zfbwjyiilq85kmzxl8v2flcw9n3brv"; depends=[]; };
-  COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.10.0"; sha256="1yd8k5pacs37yvb1bbpb46h9s3h1r8kb01r1hiwr73m1rbsg3qdl"; depends=[]; };
-  COSMIC_67 = derive2 { name="COSMIC.67"; version="1.10.0"; sha256="0mw0q9s2dsqvc5qb5p57624raki7dgs0qc1anr2vaw1pi1gvfgib"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; };
-  CRCL18 = derive2 { name="CRCL18"; version="0.108.0"; sha256="12m13kv1f1cxynlar59m5s0ihz92ff52j80dqz5m8dzsynbjckbz"; depends=[Biobase]; };
-  CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.6.0"; sha256="0zjc5h348h94h2vm926z592f1zibv000nvx039662ydhsxn58mp2"; depends=[Cardinal]; };
-  CellMapperData = derive2 { name="CellMapperData"; version="1.0.0"; sha256="12nkc500mqzfrg5yksfwf4f4kv2flk4l7lxx6ws0kw2hgrnm9yz1"; depends=[CellMapper ExperimentHub]; };
-  ChAMPdata = derive2 { name="ChAMPdata"; version="2.6.0"; sha256="1hkwwkz2k4dnsl2sshr33as16x0dh98xvsnpf0zll2vkjkjw44v4"; depends=[BiocGenerics GenomicRanges]; };
-  ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.12.0"; sha256="1hb4ay5a9z2c5zmjhlbbkcbycvmk27qimrpb6rvxkh3lprap2lv2"; depends=[bigmemory]; };
-  ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.12.0"; sha256="0wg9bsb1264wif23rqv2c863rr72crxb4n640q37ayf5zw7p6jgh"; depends=[affy hexbin limma qvalue statmod]; };
-  ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.10.0"; sha256="0v34kfkdpw8zmg1hkxbdjvk58m18ldxvsirz7s3i2vaf8k1g4r53"; depends=[]; };
-  CopyNumber450kData = derive2 { name="CopyNumber450kData"; version="1.10.0"; sha256="1rblm57ljkq1dmzsbcmwm6p9gp0mgpgm2bbjczy0dppbhhr34m2c"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; };
-  CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.6.0"; sha256="0x7cyynjmxls9as2gg0iyp9x5fpalxmdjq914ss7i84i9zyk5bhq"; depends=[]; };
-  DAPARdata = derive2 { name="DAPARdata"; version="1.2.0"; sha256="1pc26xa2hx6vsl0xpfwhrgvnnrbxgr5cnzpygayrzh3hs4ryi987"; depends=[knitr MSnbase]; };
-  DLBCL = derive2 { name="DLBCL"; version="1.14.0"; sha256="0baxgyvy07k502ndf81p2v51wrlb1p9fy0zxlx6faf0g80kghx7l"; depends=[Biobase]; };
-  DMRcatedata = derive2 { name="DMRcatedata"; version="1.10.1"; sha256="10z534ffv975x08hxdfv871lm1ngg9qmgakfhamqcdlbc02y1j93"; depends=[GenomicRanges]; };
-  DREAM4 = derive2 { name="DREAM4"; version="1.10.0"; sha256="0swyywaja7cfvn370wx6cbh5pda724v3rd5iy4rhvm7i1pg3m4l7"; depends=[SummarizedExperiment]; };
-  DeSousa2013 = derive2 { name="DeSousa2013"; version="1.10.0"; sha256="0hx68nzhjb7sqrc2zzn37n0aby388bvbxr6ads7k9rckz50lha19"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; };
-  DmelSGI = derive2 { name="DmelSGI"; version="1.6.0"; sha256="0n3ald8rg5yp5a27bwdfhdrl0rns50bmn7yi3z38qcvk6iiq9v70"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; };
-  DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.12.0"; sha256="0944p9gk4vazb2gqn5s2mij0b2vyvgs050h61d1g2iv11156wc6v"; depends=[EBImage]; };
-  DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.10.0"; sha256="0vvzvxkvg6l0q143jjh74mx4xam3q4xc9wlxbl693aipz0kpicql"; depends=[]; };
-  DvDdata = derive2 { name="DvDdata"; version="1.10.0"; sha256="0rz5yhfcammg17rx15dnkcg43cwqbwi8ipkkqmlfkr3kb4km731v"; depends=[]; };
-  EGSEAdata = derive2 { name="EGSEAdata"; version="1.2.0"; sha256="1rm3yjsngjrn86l2rdx0cz1kz9ki8h16znhag854l9yfahh9sr35"; depends=[]; };
-  ELMER_data = derive2 { name="ELMER.data"; version="1.4.0"; sha256="0l12m881b5j0i7dw2wz868p0mqlfgfz3y5yyhj6kyzvwaj677p0a"; depends=[GenomicRanges]; };
-  EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.12.0"; sha256="16q9f1p21xdh00mzb3vc2zpmyry9cfb884y2vp60gpq930vs3fsj"; depends=[GenomicRanges rtracklayer ShortRead]; };
-  FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.10.0"; sha256="0k0wajjj340wpc3zlcd9kylllfa3ly5cbfg8i38dc5g88hz5nvkr"; depends=[]; };
-  FIs = derive2 { name="FIs"; version="1.2.0"; sha256="0hw83rnb5bl4a390h2x413zlss52bkbmfyq0md69zx1rlvxpdprp"; depends=[]; };
-  Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.10.0"; sha256="14ph3ll6xli84bpg9s43hmigwbnyprzfgmr4yifw77ssqkj0r3wx"; depends=[Biobase gplots limma VennDiagram]; };
-  Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.10.0"; sha256="1wilz0mwizar8491wkym5x3xwxfxmyd9r1djh3xnc9gnq88df0dy"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; };
-  FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.12.0"; sha256="0q06szq9vs46frgax6896wkrxw5rb89854vnib68kaxkmyqrs4rp"; depends=[minfi]; };
-  FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.2.0"; sha256="1d4caj4zrjlwkpbiclqxjyzzz3vg97p61hkmrxa18hbq8v9c67z1"; depends=[minfi]; };
-  FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.0.0"; sha256="0z966py4bgxnifly56mlyqvi5v4mh1ay5nhfb7fd9qciq42jclzf"; depends=[minfi]; };
-  FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.10.0"; sha256="1dgaylgx19cbvvcrdr3wwr9rp3jdx89mlxzc4fivnzllmf1dyyqa"; depends=[minfi]; };
-  FunciSNP_data = derive2 { name="FunciSNP.data"; version="1.10.0"; sha256="0r0iv8hp25ld9vpyij9lrk0xphaxcz4j4panyc83i18d6s9jw51s"; depends=[IRanges rtracklayer]; };
-  GGdata = derive2 { name="GGdata"; version="1.12.0"; sha256="0h564577s3aklgg2a34026nacfzq3mpfmwmsl19dcmk7all5i100"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; };
-  GSBenchMark = derive2 { name="GSBenchMark"; version="0.108.0"; sha256="13lc52xdv0mk4mr54i33k8rwb19496f8g8dj7xhh9vvx3dkcrl5k"; depends=[]; };
-  GSE62944 = derive2 { name="GSE62944"; version="1.2.0"; sha256="0y8f1cq8bwkjr79vias3snclqcddd8bmh3rl041s4pv5adxgddgn"; depends=[Biobase GEOquery]; };
-  GSVAdata = derive2 { name="GSVAdata"; version="1.10.0"; sha256="0lbh07ygyns6db3g0208691q7ry0mjg2lhis4pqw6rr122mvhh4l"; depends=[Biobase GSEABase hgu95a_db]; };
-  GWASdata = derive2 { name="GWASdata"; version="1.12.0"; sha256="0ygkrm7gybfj4wb8rc56zrwyfbpgl1kz50dyrz5glwkgzxqn00dq"; depends=[GWASTools]; };
-  GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.2.0"; sha256="0jlmkqkjrffspny20w6yci319ry63sjnsychz6z9gwacy72fz14y"; depends=[]; };
-  HD2013SGI = derive2 { name="HD2013SGI"; version="1.14.0"; sha256="0whm9irlfmjamsjcjbxb1c574g60iscx10f498l9vh857iv1q8vl"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; };
-  HEEBOdata = derive2 { name="HEEBOdata"; version="1.12.0"; sha256="1j79sxx3ig61ny8r0j40m4fba5rf61k8rq23b5w6rcq6zwysymh6"; depends=[]; };
-  HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.14.0"; sha256="0h42jvnmfdr14glnlspgiznxx5qh19pn6abw4qyf2q24yps5hrpd"; depends=[]; };
-  HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="0.108.0"; sha256="0i48h84qpcwraj8rhmisk6g7l6m9wf5a4p5pl6kr0ipfpr6fnh2b"; depends=[]; };
-  HarmanData = derive2 { name="HarmanData"; version="1.2.0"; sha256="0xlqp2fx8glhykdnc38mjsxjc78bb3q72jx168djq2r0z3gxivai"; depends=[]; };
-  HelloRangesData = derive2 { name="HelloRangesData"; version="1.0.0"; sha256="0lcmww0pyx3pjqnhvkdz9zv5s0cbrgxd7hvf0fz7hkcqn3sdw2p6"; depends=[]; };
-  HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="0.108.0"; sha256="1sw1i7i5hi1kx7h9nqbnxb6h4wl97yfirsfw4m9sb879ycbwq58p"; depends=[]; };
-  HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.10.0"; sha256="1mka0is34lxg7cyrsdahkm11xnvlz17qk7bs8bwlkxc7gz90aj3j"; depends=[]; };
-  Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.10.0"; sha256="0lirsd1875v3qkmszj2pbaj8r552ndlvxhfhbl62rwsia5g5i356"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; };
-  HumanAffyData = derive2 { name="HumanAffyData"; version="1.0.0"; sha256="03cxc5bs8q27n8jrclnndgw02mjqf9wn4gc8z39x2bd4gwhjjvpv"; depends=[Biobase ExperimentHub]; };
-  IHWpaper = derive2 { name="IHWpaper"; version="1.2.0"; sha256="0d0rns36wb57vizgmjwsjmgb3qgp8ng31d81n1z0wzhdwrdir9vv"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; };
-  ITALICSData = derive2 { name="ITALICSData"; version="2.12.0"; sha256="1l3xvgav4k3d5xn0wa0046dx2i395gndvwh8ni1452dx98wj8xlw"; depends=[]; };
-  Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.10.0"; sha256="17mcl8850pzfr5lmdis8659kfbfy63qgp61h3wrd1nbqn0skk5q8"; depends=[]; };
-  IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.12.0"; sha256="1d4ycz9di7nqqpf2kcjaldg49s8jfvyfgb5q5i1ni68grzfi6p4k"; depends=[]; };
-  Iyer517 = derive2 { name="Iyer517"; version="1.16.0"; sha256="0gs7793q5zbgiynpvkq46l0yc862sfy87090jkvw1m6mlci89qkk"; depends=[Biobase]; };
-  JASPAR2014 = derive2 { name="JASPAR2014"; version="1.10.0"; sha256="1cbqrn54fb7jqfaswlvq4ljshfwg08ra07sh1g4dpv0nb2kkgv18"; depends=[Biostrings]; };
-  JASPAR2016 = derive2 { name="JASPAR2016"; version="1.2.0"; sha256="0j0ilzml2i0j7bql2qly14h1xnrvdar65fkaxkvv2ncbyxgisiky"; depends=[]; };
-  JctSeqData = derive2 { name="JctSeqData"; version="1.4.0"; sha256="0gw78wm9s8mz87zidfm49ly79gws8xfd7y4my4k39l1caqhlzbdd"; depends=[]; };
-  KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="0.108.0"; sha256="1q209v42ncczqwfmc71i0s3x6axlzqi3k474xccnhpsxcaz3s0a6"; depends=[Biobase BiocGenerics]; };
-  KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.12.0"; sha256="05mplbzvwfqnn8ffdha1s99bhkq537vsmk46zq217cn0cl4csqrl"; depends=[Biobase BiocGenerics]; };
-  KOdata = derive2 { name="KOdata"; version="1.0.0"; sha256="1ggr9ayhz3h2x7g4n3l3pnnhdznw1iyp45n8sixp90ha9133hv9b"; depends=[]; };
-  LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.12.0"; sha256="101xq53ra360fhifn274nmdsbbj7pralhhgzzy0pr00a48x68lwc"; depends=[IRanges KernSmooth]; };
-  ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.6.0"; sha256="05g6qn1zkbk6daps9nnzqnn748qxda0avi2mbzsrcfqp231dkhs8"; depends=[methylPipe]; };
-  LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.10.0"; sha256="13x5hj6503aavyv4bygf26krvj8ppwaalrhizwylkdn4zglv4nv1"; depends=[]; };
-  LungCancerLines = derive2 { name="LungCancerLines"; version="0.12.0"; sha256="1xsas3d0n6h5xy03ybqy82cfh1gq97lim33mi163j598yhd1c6zs"; depends=[Rsamtools]; };
-  M3DExampleData = derive2 { name="M3DExampleData"; version="1.0.0"; sha256="07awll0dmi7wnr5w7nc89g1mqf6b9r2mw858x0vzwkwf58qixqh0"; depends=[]; };
-  MAQCsubset = derive2 { name="MAQCsubset"; version="1.12.0"; sha256="1gngz2a17n4lmcy59wcxywlgarp9h985wzmxz59vymx9n3in5lj5"; depends=[affy Biobase lumi]; };
-  MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.12.0"; sha256="1ic7xdlfw0mikgmq961dc58sqfiyq2464q9w49hblcl25gf2pxi0"; depends=[affy Biobase]; };
-  MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.12.0"; sha256="1jiydpacyvdvlynlhcqrnc9xysbvn755lzrcz8pm2h79wanpcpsp"; depends=[Biobase lumi]; };
-  MEALData = derive2 { name="MEALData"; version="1.4.0"; sha256="01pn75kkvk6w1xim9hwqqpjv9gb1g7a4f4110hhllabhih3ygjlv"; depends=[]; };
-  MEDIPSData = derive2 { name="MEDIPSData"; version="1.10.0"; sha256="1vdmh5rlygjmrkzy599rcr90anci3dzzz666b87b2w3z04vvyyqp"; depends=[]; };
-  MEEBOdata = derive2 { name="MEEBOdata"; version="1.12.0"; sha256="0c4b69dhpkxarbna63dzacm81kizfdm425xmcb4xs0zs6jv6kj4j"; depends=[]; };
-  MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.10.0"; sha256="0yilicgglvb22gl5zv7rdjc5yczfz7kvzysnajb0qgpw94ha1wjx"; depends=[]; };
-  MSBdata = derive2 { name="MSBdata"; version="0.12.0"; sha256="1g0piddp8qpqf8nncsv73zymad5qmf2hxam44sn1m6227m4r8xdc"; depends=[]; };
-  MUGAExampleData = derive2 { name="MUGAExampleData"; version="0.108.0"; sha256="0hw4f6syk1m4zxr423cx7asahq1lkbi7pnhspda7m5127fs5ikxa"; depends=[]; };
-  MethylAidData = derive2 { name="MethylAidData"; version="1.6.0"; sha256="1ws6vn9pg1hmcyajrvyg645glj2khg43v75ppn72ylfysx8h86yl"; depends=[MethylAid]; };
-  Mulder2012 = derive2 { name="Mulder2012"; version="0.14.0"; sha256="0ah5digpg8j3dwhqx0gqf0r46vwpqmglk89k4h504vn18ff99vbi"; depends=[HTSanalyzeR igraph KEGG_db MASS org_Hs_eg_db PANR pvclust RedeR]; };
-  NCIgraphData = derive2 { name="NCIgraphData"; version="1.10.0"; sha256="1pdm201xvhhbdd2blrg2yxjhm00pqvkxk0x1saykb6rrdq2zl16w"; depends=[]; };
-  NGScopyData = derive2 { name="NGScopyData"; version="0.108.0"; sha256="0bk50jfmbq8p8c81jmcy85xqnqrw2amsa3f7hdnkj36k2gmqzzyf"; depends=[]; };
-  Neve2006 = derive2 { name="Neve2006"; version="0.12.0"; sha256="0s0brv5k92bhls8flbq8qbxs53gnsgibr9mqb3jkhjz039ir749s"; depends=[annotate Biobase hgu133a_db]; };
-  PCHiCdata = derive2 { name="PCHiCdata"; version="1.2.0"; sha256="1bksxvax6j9wxjszkq0cx7jx84i14qb9dqlgjahjr559slkqbzmh"; depends=[Chicago]; };
-  PGPC = derive2 { name="PGPC"; version="1.2.0"; sha256="0im1s07l3rbcwmglm1vw5yq8qp307bbbkij851cbs639wlq7s22w"; depends=[ChemmineR EBImage geneplotter ggplot2 gplots imageHTS limma plyr RColorBrewer reshape2 SearchTrees splots]; };
-  PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.14.1"; sha256="0p898qdp5fnfads1n6rlwi6c2zp332m0jqdw21fsr3lx59d3s8jv"; depends=[affy annotate Biobase gahgu133plus2_db gahgu133plus2cdf PREDA]; };
-  PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.8.0"; sha256="19b2q9p76cyjl8dgmjagdr9zxr2xfinpp4qr26772s7bsxwq0rll"; depends=[PWMEnrich]; };
-  PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.8.0"; sha256="0g2mjiyv415n0cl0nrj5va61f5pf9wdv27q92xsbzp0fgybjd4hy"; depends=[PWMEnrich]; };
-  PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.8.0"; sha256="0zhrvynj3my4pdd57nybw62jkaqm039i7vm9v253qzdaf8h0xs3w"; depends=[PWMEnrich]; };
-  PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.2.0"; sha256="1i2qa0rd0ncx77cr1d3f4wb939na5ycpli3q3d8k2l027nl4rjks"; depends=[]; };
-  PathNetData = derive2 { name="PathNetData"; version="1.10.0"; sha256="16k9nvxhs80vfcvjhr3dssxjq53zlm1802dkr24icngpnfmlwnj2"; depends=[]; };
-  ProData = derive2 { name="ProData"; version="1.12.0"; sha256="14mrgfxk3jrzy3ghdcrh8flfkm4b6xi42sjb8sws57jfcda0zd2v"; depends=[Biobase]; };
-  PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.0.0"; sha256="1gsz60vg8h0w13v29bkj3pczivn7cpkg515rl5rj42vjxbw4mnsh"; depends=[CAMERA LOBSTAHS xcms]; };
-  QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.4.0"; sha256="1l0m384swvnxz4jrcgzc0a4fr03g12by1b5y9ncwdkwrz8imr52q"; depends=[QDNAseq]; };
-  QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.4.0"; sha256="1sp8jsjy0gji38sx44qdrp9v0s0inw0r7hrgwbjvr6vn6xmifg6i"; depends=[QDNAseq]; };
-  QUBICdata = derive2 { name="QUBICdata"; version="1.2.0"; sha256="148rgjgj1fkvc4nw7mszhc2dagljhx672vpyvldjr4cnkwwd9vwz"; depends=[]; };
-  RIPSeekerData = derive2 { name="RIPSeekerData"; version="1.10.0"; sha256="0bfpr197gjhwszpmvdfkmfa92yrc9jp567h5whzl0mb687k6ax3n"; depends=[RIPSeeker]; };
-  RMassBankData = derive2 { name="RMassBankData"; version="1.12.0"; sha256="1fzylbwhqn5al98c1jmdj7bzn7np233h617hbzcxblknaglafv0m"; depends=[]; };
-  RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.12.0"; sha256="0dv23vr84xr3rjk0syx9d1x9zj2d42rl3yfsbh2aaf1rcrjafc14"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; };
-  RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.12.0"; sha256="13pb2ljr4mq741vc443r573ynbynjsrhmas5gf2qnyn4j4wj5bra"; depends=[]; };
-  RRBSdata = derive2 { name="RRBSdata"; version="0.108.0"; sha256="0sjw006kzikck8kdfvpqyx8bkhmfcbz363imgm72avzdqn7z5430"; depends=[BiSeq]; };
-  RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.2.0"; sha256="0gf5l0mzihhl4rhfqd81g4ql8pvwm2lgj9qjybfp94pr3h9kkfvx"; depends=[RTCGA]; };
-  RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.2.0"; sha256="0kkg0ds8p5rrjcdzq81g1bplxl685k5iki9w11kwpkmnnxslf5f8"; depends=[RTCGA]; };
-  RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.2.0"; sha256="0088cm640mzbzbyj1pmvi35l0s2zpl5x2pmhj2lz2zjp4dis2g3p"; depends=[RTCGA]; };
-  RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.4.0"; sha256="0qhg1dx77xarjzb41dpvhlvl9aqwsyscavk3n3w33zpn1r087v33"; depends=[RTCGA]; };
-  RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.2.0"; sha256="1grrcrd8lsjfk056r018y2rkn2zr31k4jc854mllh7sgpg0jr6br"; depends=[RTCGA]; };
-  RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.2.0"; sha256="1c7j35jn0076v3pv0h2yiphl2b9ga8hq0d6xb6hm7jasgq4i4w25"; depends=[RTCGA]; };
-  RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.2.0"; sha256="1mfbq20s2zp234arkqy0g5km7y8jnymwnm4vl13vxqqcv12f3kr8"; depends=[RTCGA]; };
-  RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.4.0"; sha256="0jxr2g8x5z4vyhs9n3ciiis45bs3jg3vg1v4mwxl4v4gys8p3i9b"; depends=[RTCGA]; };
-  RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.4.0"; sha256="0ag3kmh2zfg9rqpmiih686klpcqd05l2cf5zfvg0vjwcim30xph2"; depends=[RTCGA]; };
-  RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="0.108.0"; sha256="134ixgi809nmp54p7h94878pl61w3djrizvb32cb228a6djc1aj4"; depends=[Biobase]; };
-  RforProteomics = derive2 { name="RforProteomics"; version="1.12.0"; sha256="1hzgq16mhrd0n7myav91ykmbvi3r71g625x52lvi61shjism5jp7"; depends=[Biobase BiocInstaller biocViews interactiveDisplay MSnbase R_utils rpx shiny]; };
-  RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.6.0"; sha256="1dssr1d9md7xl7fm1b537wxsa1bqqwjvb8mnrmqwl3ish0asy525"; depends=[GenomicRanges]; };
-  RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.6.0"; sha256="172rbvi4gqsygb7fhdymzm0a2r4wyikgzfaxgjj4bwkl24lss6ac"; depends=[GenomicRanges]; };
-  RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.6.0"; sha256="100dzzmmvmb5s43hckn286waja0qkd5rhba0cas3ifg5n21inbyc"; depends=[GenomicRanges]; };
-  RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.6.0"; sha256="1jdr4vz4dp4q1ifjz38s5i6lwdvaws29176679m0xsckmvw8rlf8"; depends=[GenomicRanges]; };
-  RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.6.0"; sha256="0bfcs51lmrm5ydd5zbkpkaw69ziq3yg00hi0kkcjrhk7nn1kjp66"; depends=[GenomicRanges]; };
-  RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.6.0"; sha256="01vwk652hhh6rc6l0q0ylnzh0ng5ck91kki37qib7c714fy6f1fa"; depends=[edgeR]; };
-  RnaSeqTutorial = derive2 { name="RnaSeqTutorial"; version="0.12.0"; sha256="07jkzxavpyg54ddh4xmzxsilcrr8x8w7lj6c4s02s8j23rxzxi2h"; depends=[easyRNASeq]; };
-  SCLCBam = derive2 { name="SCLCBam"; version="1.6.0"; sha256="1lhc5c6icys4qnsbc2ixck3h63fsa8pnypam5k6wbvw79afr4xnm"; depends=[]; };
-  SNAData = derive2 { name="SNAData"; version="1.20.0"; sha256="1ny0fdgx2kv6hs0rqnc70aixsa2cs7i2r17dklv529iks49i3n2n"; depends=[graph]; };
-  SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.10.0"; sha256="182agiw245zrb7lbyn1c38w1kljqs73lkvhvrlrilww1bfhwlrwc"; depends=[]; };
-  SNPhoodData = derive2 { name="SNPhoodData"; version="1.4.0"; sha256="1w36157kdn1fji5pgj75bf88isfhvavpgyxnm9dfnzz5r1qaxx79"; depends=[]; };
-  SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.6.0"; sha256="1rsagb2nlc8airrdql7sa4rl1h34nhmds4lz0yx5i3dca8jzqn61"; depends=[]; };
-  Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.2.1"; sha256="143qp77bhrrclfvqqsk86cz7xqsnn5wfi41z9hp4klai0dhgk68g"; depends=[]; };
-  SomatiCAData = derive2 { name="SomatiCAData"; version="1.12.0"; sha256="1cqbprdlrz3yz1zjjrd33wy4ybhkfq943pv3pi0bx4yz9gqc5625"; depends=[]; };
-  SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.10.0"; sha256="0sqdgmqs3ds3hnfn7nmmzhs8m5if8wy8rrfp7q76qhz7winqmqxh"; depends=[exomeCopy GenomicRanges IRanges S4Vectors stringr]; };
-  SpikeIn = derive2 { name="SpikeIn"; version="1.16.0"; sha256="0nvxix2hsamcffdg6zqlvavx6l41qmfz7q1ycq99rjmv4rznl1z1"; depends=[affy]; };
-  SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.14.0"; sha256="16yisl8m9ggb995snsbhsfxxnqr2v2d5k8ay9w2hipkacaiskwcm"; depends=[affy Biobase]; };
-  TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.10.0"; sha256="1008i15x17k20596da1ai2dxqhyqi9v6bpskd0c66xvhnifmzpna"; depends=[Rsamtools xtable]; };
-  TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.10.0"; sha256="089ddz2w5kqn3zc07ji9lb7k6msd7r4a6j6aymkx59d10qlx97f6"; depends=[]; };
-  TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="0.108.0"; sha256="0zkawybz6fyfcsga92vw6mx1y1qb6nrp9qcmjvd8ki9phhg7k8yb"; depends=[Biobase]; };
-  TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="0.108.0"; sha256="13ipkl1rd2s0vdz32jp30hz3fz7d9hmhfx626jy9q576iqpqb94j"; depends=[Biobase]; };
-  TargetScoreData = derive2 { name="TargetScoreData"; version="1.10.0"; sha256="1jw9nhylj82g5gmhl1a6pirf4jyb1i79mm9a3afqrcgv55a5ksvp"; depends=[]; };
-  TargetSearchData = derive2 { name="TargetSearchData"; version="1.12.0"; sha256="0acijg56wx91xqrmgqp1pk8cwl3wf5j4f8csdd9p46frlfa5iw8c"; depends=[TargetSearch]; };
-  TimerQuant = derive2 { name="TimerQuant"; version="1.4.0"; sha256="1pihpj8q0vrhwip6c35lnv78r3nqcs1p18npb26bxhv02hb8cc6i"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; };
-  WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.6.0"; sha256="0lpmrqmgcv96rbfylgsaffwwp5qqnj7kmfniahhj4zsxyjsy90fg"; depends=[]; };
-  XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.12.0"; sha256="00pdinf4mnl5mbwlzh7vwqw775ag2v2g5b5lqnhmxsnyfqsxgpb5"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; };
-  affycompData = derive2 { name="affycompData"; version="1.12.0"; sha256="1yz3y8y169qla8x194zlc3im43827a7233gla6arv552yg3fj703"; depends=[affycomp Biobase]; };
-  affydata = derive2 { name="affydata"; version="1.22.0"; sha256="1zizi0p3r3y9h6kk2a1hci9x23i2wbq1krvl9nxd6jzx09fq25sv"; depends=[affy]; };
-  airway = derive2 { name="airway"; version="0.108.0"; sha256="00vxi6i9c5c14gfqm5w9q6lg0h1hb96rfm8jqsvw81lpqqlnyjgd"; depends=[SummarizedExperiment]; };
-  alpineData = derive2 { name="alpineData"; version="1.0.0"; sha256="0s3xls7b71xn6f9fsqim79cnv4mf5xz1dli9rr4ralzllvh9hm9d"; depends=[AnnotationHub ExperimentHub ExperimentHubData]; };
-  antiProfilesData = derive2 { name="antiProfilesData"; version="1.10.0"; sha256="1fzjic8prjwpx43imm73g0znzry42rlziyzr5n6zkbgqx44kh398"; depends=[Biobase]; };
-  aracne_networks = derive2 { name="aracne.networks"; version="1.0.0"; sha256="1y2n3xdaccfmij7jaxgzjh1bwvaczp8wsd6757fm8mn1qgalgjdc"; depends=[viper]; };
-  bcellViper = derive2 { name="bcellViper"; version="1.10.0"; sha256="1pc4av4i0iwxg0v5aqb9rn0m2z8vnqqwxs57x3nsdirhl7pv92qm"; depends=[Biobase]; };
-  beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.12.0"; sha256="1kknkispmbxhwikhl0b3g2p0885gm82h3bdl6id4rwxvli86db8s"; depends=[beadarray Biobase]; };
-  beta7 = derive2 { name="beta7"; version="1.12.0"; sha256="0lm2lz36lmz6kxp1ia7cfd129kif9a2vyn2cngjsvhvm2pxplrl5"; depends=[marray]; };
-  bladderbatch = derive2 { name="bladderbatch"; version="1.12.0"; sha256="0dsz57a9si7i06nwvmvn0l65jhc1xbc3ywjh1z32smm8rvn8x90b"; depends=[Biobase]; };
-  blimaTestingData = derive2 { name="blimaTestingData"; version="0.108.0"; sha256="02fksg7kpb9knj7f47l0dbc016min91xf9d5xccpa833wylylyjj"; depends=[]; };
-  breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.12.0"; sha256="0smmvhb38z6wa7inbg5y8skl10p7yybq9qh2847xpzdnivldxfwa"; depends=[]; };
-  breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.12.0"; sha256="0bznvksrmpxp0ba9md96ch2qsk67jyda33b74bzk0hrxkijhm1i4"; depends=[]; };
-  breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.12.0"; sha256="0sghqg2fs7khb54x2p3mlc7mynbp417bccszcij9gq43njwfdra0"; depends=[]; };
-  breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.12.0"; sha256="0pg862q0m9m51iqk85gx9ihl17ld0x7i7j39g0y7bcvr7cy1djrd"; depends=[]; };
-  breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.12.0"; sha256="0pidz7safi6z2nbrz2wrjqx1ygyxg6ggagv4sfdy53ym07lwfdz3"; depends=[]; };
-  breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.12.0"; sha256="197g42apvsp9vaipj4zf3kma90j8zsvx9b8q4crdl5czvkzmpixa"; depends=[]; };
-  bronchialIL13 = derive2 { name="bronchialIL13"; version="1.12.0"; sha256="0amg5fn0dprnz5wwjacm73xbih1bbw04f0vm3rfplpiwqh83cq1g"; depends=[affy]; };
-  bsseqData = derive2 { name="bsseqData"; version="0.12.0"; sha256="0m0dj3rd7m80la8h58s1lfxfkmz3a242vp3i1yiv9y6c0hca7yq4"; depends=[bsseq]; };
-  cMap2data = derive2 { name="cMap2data"; version="1.10.0"; sha256="0l7hnr6w5g0n0ma24xm57dlqdrrlrhm6a4cw4p65hwn9djxxiz1m"; depends=[]; };
-  cancerdata = derive2 { name="cancerdata"; version="1.12.0"; sha256="0rzp8a210vk8j9nlf1g228jsccdbabl99jbd27qi90bbs0kdnkp3"; depends=[Biobase]; };
-  ccTutorial = derive2 { name="ccTutorial"; version="1.12.0"; sha256="17r030iajkaash8jfzfdb7d2xfd5mn9q27mkc11dycpqbji61q1q"; depends=[affy Biobase Ringo topGO]; };
-  ccdata = derive2 { name="ccdata"; version="1.0.0"; sha256="05raawlm17vhiap34z812g1ri5yc77h7qs4lj1gfk1kkcpj2knsf"; depends=[]; };
-  ceu1kg = derive2 { name="ceu1kg"; version="0.12.0"; sha256="09xi5fvr7cigs1qs98phcapzqi8jam34gky2pxksi9gkw2n9j451"; depends=[Biobase GGBase GGtools]; };
-  ceu1kgv = derive2 { name="ceu1kgv"; version="0.16.0"; sha256="11hyhddf395hyypxsl8na23pwcwlnmr639c927wxqibxxp1lfqsk"; depends=[Biobase GGBase]; };
-  ceuhm3 = derive2 { name="ceuhm3"; version="0.12.0"; sha256="03qkfk9mxz510lmr9spv74d3138bvfcpsgp0qnjw3jj2xiwn4jqq"; depends=[Biobase GGBase GGtools]; };
-  cgdv17 = derive2 { name="cgdv17"; version="0.12.0"; sha256="1cl725dhyh81rsxgv2icfljczbcgsnqba383gjfyf06d2qarby1y"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; };
-  charmData = derive2 { name="charmData"; version="1.10.0"; sha256="1v760z5br1cj5dj97ayl68dv202086v2mcnhn6bpv0kf62q9mia2"; depends=[charm pd_charm_hg18_example]; };
-  cheung2010 = derive2 { name="cheung2010"; version="0.12.0"; sha256="15z6p2kfrbs9wbsf7rqmg53k5i6gja5hix97sl9bj7y3jkxws62b"; depends=[AnnotationDbi Biobase GenomicRanges GGtools hgfocus_db]; };
-  chipenrich_data = derive2 { name="chipenrich.data"; version="1.10.0"; sha256="0zcj4pa03ny4b1rng4ima23jc6sqvsznp52d59vipnqd4jg1ic95"; depends=[BiocGenerics GenomicRanges IRanges]; };
-  chromstaRData = derive2 { name="chromstaRData"; version="1.0.0"; sha256="0d0g20mg36mxldl9f0bzqbz9vzp526pqy501k0g7bmj5sbgd2p3s"; depends=[]; };
-  cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.10.0"; sha256="04bkk8360pc0sp8n1z16smj888gbglgghklciwpzk2d513wwapdr"; depends=[cnvGSA]; };
-  colonCA = derive2 { name="colonCA"; version="1.16.0"; sha256="1kjlw5qi6yvk6amvnmjjnr5ypvqmslmm9lmkgdgab3s38hyddj2a"; depends=[Biobase]; };
-  curatedBladderData = derive2 { name="curatedBladderData"; version="1.10.0"; sha256="1k957gad0xlv0nzcimypf32dpqvldc1w8lj2a274y8spb66imfnw"; depends=[affy]; };
-  curatedBreastData = derive2 { name="curatedBreastData"; version="2.0.1"; sha256="1l767mg3bknp91is7mqb13w2kpdihf4vbphwhqyvmzsl5rv2vc7y"; depends=[Biobase BiocStyle ggplot2 impute XML]; };
-  curatedCRCData = derive2 { name="curatedCRCData"; version="2.6.0"; sha256="1l1lzkyrvpz334xda4z3mxh2ql3zhhmc376znrjfryzi5jbypnh4"; depends=[BiocGenerics nlme]; };
-  curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="1.0.4"; sha256="0xpq25rmg8bxwsvm35qm20l6b7a3kg5p9ngvj2dvnf00jn7vv2bj"; depends=[AnnotationHub Biobase BiocInstaller dplyr ExperimentHub magrittr phyloseq tidyr]; };
-  curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.12.0"; sha256="1qjmmxh0cb4y418rl5wg8inkj5cffniw7jd6vjj3j2yiaq9b5d6l"; depends=[affy BiocGenerics]; };
-  davidTiling = derive2 { name="davidTiling"; version="1.14.0"; sha256="0n7invq1j0lmrylzrggmlndj4ag196rhyn0lvi746p8sxzdapfaf"; depends=[Biobase GO_db tilingArray]; };
-  derfinderData = derive2 { name="derfinderData"; version="0.108.0"; sha256="041yq05x9d09n82c9wnwqa1rakkf4p1q3rs9vlacl45bdqdbdsa4"; depends=[]; };
-  diffloopdata = derive2 { name="diffloopdata"; version="1.2.0"; sha256="0vvkgfixvs76cymz0nlyzp7sh9jzd1mcbl5pbnnziybwn5fdpw3g"; depends=[]; };
-  diggitdata = derive2 { name="diggitdata"; version="1.6.0"; sha256="0xyvd8jdpn3y9s88z489cinacb4bnnp1jqg2aj7h9hhaj95pywsq"; depends=[Biobase viper]; };
-  dressCheck = derive2 { name="dressCheck"; version="0.12.0"; sha256="1mm8hlivhcf9f01aqdcipq4wz7x3ga8znpcpi69jgh3iadf5x2xq"; depends=[Biobase]; };
-  dsQTL = derive2 { name="dsQTL"; version="0.12.0"; sha256="00nry3qf9r79x65scyfghjyj2qbc6ji0l7c1rayrk5s6pxj0v0hw"; depends=[Biobase GGBase SummarizedExperiment]; };
-  dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.14.0"; sha256="18ghl3l7ps6xz90gyrnz3zc0rba99yg8ry9fpfbv7yni888hl9bx"; depends=[GEOquery marray]; };
-  ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.14.0"; sha256="1s03jpb83j8xgwxdr5z7233175jhd4w7vikalxvh1mvk9bqa8rmk"; depends=[affy ecolicdf]; };
-  estrogen = derive2 { name="estrogen"; version="1.20.2"; sha256="19f1gjppzfg21ci6jdxgwv7h14mm89spnj4qr71pwid0a4kiq6gn"; depends=[]; };
-  etec16s = derive2 { name="etec16s"; version="1.2.0"; sha256="11c1swf7n9g1vnvidmcjpvzj3hgv4dgx6civv3plvamzfcz3jk29"; depends=[Biobase metagenomeSeq]; };
-  faahKO = derive2 { name="faahKO"; version="1.14.0"; sha256="1yxrmnbpi706q23n6jc3hngl378w41dkhzcy4gqlbcgwdhbi9yq5"; depends=[xcms]; };
-  fabiaData = derive2 { name="fabiaData"; version="1.12.0"; sha256="1ws09sp07i26ky6pwambw3bvnd2qx2rsvm055hp1j3vrc7qvawwb"; depends=[Biobase]; };
-  facopy_annot = derive2 { name="facopy.annot"; version="0.108.0"; sha256="1wxprfj0420qfbls1jd58raa7ff98fhnna804slagrs8r2ka7kqb"; depends=[]; };
-  facsDorit = derive2 { name="facsDorit"; version="1.16.0"; sha256="1dla6vv0had55afsv2h8hizkqbng7schadb5w5nbk3va7hzbnjzb"; depends=[prada]; };
-  ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.12.0"; sha256="16n6kfcq33byrn0xx43bn52c0rbzw3ars9wxg9yd9rfnf23scmbb"; depends=[lumi]; };
-  fibroEset = derive2 { name="fibroEset"; version="1.16.0"; sha256="1sr672f6x52rhic69i8cii04cd204ra0lhpxh0dqm78yxkp5mqxc"; depends=[Biobase]; };
-  fission = derive2 { name="fission"; version="0.108.0"; sha256="0fdsaymwv057sb0bddkaqz320wm6bk1hikwy9js4pc5mbi2r9q1w"; depends=[SummarizedExperiment]; };
-  flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.10.0"; sha256="1z2q9h4arv8a89a5g5j5pzp1k02kmz1h6g0zrvgvz04ys411phv3"; depends=[flowCore]; };
-  flowPloidyData = derive2 { name="flowPloidyData"; version="1.0.0"; sha256="16sgzy2xpjnlm22ca3fvdcfzlfyylsxpjzbv8xaz3lmb7gf8fqix"; depends=[]; };
-  flowQBData = derive2 { name="flowQBData"; version="1.0.0"; sha256="1lyj5xkc70l3szxspa6gasnx5g4sv6azwzs0b1cvs5y5kngxpns3"; depends=[]; };
-  flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="2.10.0"; sha256="1pfy1f0flkf22a7ijb2xay6za80y9ny5ja2dy6p4z9w8cqyk8vqp"; depends=[]; };
-  frmaExampleData = derive2 { name="frmaExampleData"; version="1.10.0"; sha256="1iznkg12c50lzj0xj1fz92ybqap09fysx0f71g84qpmdh7df5aap"; depends=[]; };
-  furrowSeg = derive2 { name="furrowSeg"; version="1.2.0"; sha256="0h596g0j6by70ijpli9m2wnxnj7g6gz92vv2dl68s7jnya4n88s9"; depends=[abind dplyr EBImage locfit tiff]; };
-  gageData = derive2 { name="gageData"; version="2.12.0"; sha256="1fn4by56fqa9dfyb5a7pjv5f6nsp8gybgp572dyl3jq7bp9imr3j"; depends=[]; };
-  gaschYHS = derive2 { name="gaschYHS"; version="1.12.0"; sha256="1cwnik2znx13i4p8g3wxyk19r9pd3flxha04b0y4404pvwxa7gac"; depends=[Biobase]; };
-  gatingMLData = derive2 { name="gatingMLData"; version="2.14.0"; sha256="0yshv46pj4fjyz49azbrzdqjzppkx4548fsb2k77dvypim6hiiwm"; depends=[]; };
-  gcspikelite = derive2 { name="gcspikelite"; version="1.12.0"; sha256="0a5gmf667wr1vx2qalz4fvk0c49m6590mvv96ijnrdd9p6k1g450"; depends=[]; };
-  geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.10.0"; sha256="1a4qqpcid9g1zx5zrpcshlwm8xk1bbppanyfpx077sa0ifpjcxny"; depends=[GenomicFeatures rtracklayer]; };
-  genomationData = derive2 { name="genomationData"; version="1.6.0"; sha256="16dqwb7wx1igx77zdbcskx5m1hs4g4gp2hl56zzm70hcagnlkz8y"; depends=[]; };
-  geuvPack = derive2 { name="geuvPack"; version="1.6.0"; sha256="17yr9zm3kk7744sdiyyls4g1n6fhwfq1gafj1713viygk46ff0ps"; depends=[SummarizedExperiment]; };
-  geuvStore2 = derive2 { name="geuvStore2"; version="1.4.0"; sha256="1vrb5a62p6wm9vsf7q9hwjr0n5yv5cqr3z50jd6ymwxb9jy3f4vg"; depends=[BatchJobs GenomicRanges gQTLBase]; };
-  golubEsets = derive2 { name="golubEsets"; version="1.16.0"; sha256="13lhfhagnc17yva53ax0847mzrlp65bsn8b9haq678kjmd0ry25k"; depends=[Biobase]; };
-  grndata = derive2 { name="grndata"; version="1.6.0"; sha256="0hqli6f9x7amhlwgszhhvrhbazb3ga0r31107n5v5nxfwqmbmgwg"; depends=[]; };
-  gskb = derive2 { name="gskb"; version="1.6.1"; sha256="1az4dw0hwh2ba1v9k5zajgcicxihmr668cvw5qqka14mvh1im30h"; depends=[]; };
-  h5vcData = derive2 { name="h5vcData"; version="1.108.0"; sha256="13rh4bk47q2nkfgj6sbwbifcidmf34i7s4dhymr8gabplxfcy9mj"; depends=[]; };
-  hapmap100khind = derive2 { name="hapmap100khind"; version="1.16.0"; sha256="1aaiszx3dhphx62g246w9qngadqj9azkyk7k49igsng329mz8836"; depends=[]; };
-  hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.16.0"; sha256="1awqvkxcnb3zmi5cds6krs4hc4q90q7kn592ir9a3ypsqsbva4dz"; depends=[]; };
-  hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.16.0"; sha256="0cgwy7fqmhg947vfhl4cymj5ssb7avdj330cj7cjil2zilcg3a52"; depends=[]; };
-  hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.16.0"; sha256="11y06piiwgh1v6c489fkjxf8yw9zfc0llrhhnx2syhscfdgw94md"; depends=[]; };
-  hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.16.0"; sha256="1a0x1prw77d1lddlbdnvqank98xx8gd7a1a8n6c6fwkjynxn32ha"; depends=[]; };
-  hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.16.0"; sha256="0rppn6x3f2fpr369mv04pg6pvbmp0j4lnyj84l0vvmqrjyij3vqz"; depends=[]; };
-  harbChIP = derive2 { name="harbChIP"; version="1.12.0"; sha256="01spjp27icgfjwf3cjvz8w5kg6gpqmlkfxdm3j2irn9qvpphw186"; depends=[Biobase Biostrings IRanges]; };
-  healthyFlowData = derive2 { name="healthyFlowData"; version="1.12.0"; sha256="1dfcc1v22wbzbbsrkjvy8mhv6brxisz5yv1g7zrpswnmchbqxkvd"; depends=[flowCore]; };
-  hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.12.0"; sha256="1ig7myihlmcd39g6qqmbb8fm59vpizfxps4x8pbj676p1578iaw9"; depends=[]; };
-  hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.12.0"; sha256="0bnl9z34xn4frqlc9pvnvp4ng1ky0vn5zvjwjv6hc6dki14cgfxp"; depends=[]; };
-  hgu2beta7 = derive2 { name="hgu2beta7"; version="1.14.0"; sha256="115zgss29249az653hw2cd02skmr9fbivsh6zj837m4scnbjwpqz"; depends=[]; };
-  hmyriB36 = derive2 { name="hmyriB36"; version="1.10.0"; sha256="1whpk1479qhlxmd44bhpsm1xlz2z4pxn918kpwis9mn1inwbmwp0"; depends=[Biobase GGBase]; };
-  humanStemCell = derive2 { name="humanStemCell"; version="0.14.0"; sha256="16ad8syrainj8zpp9mhqfxq8xsn9jfdiyf29zjhdb4pnci3rqf7i"; depends=[Biobase hgu133plus2_db]; };
-  iontreeData = derive2 { name="iontreeData"; version="1.10.0"; sha256="187d9mdamp3kb1nvp0ckhza6ws4ga9c4fw35isnc1jsssag1pf7j"; depends=[]; };
-  kidpack = derive2 { name="kidpack"; version="1.16.0"; sha256="10cab09hdyrndnjgazbvlm3c89qmmj458nbvdd8liiipq1r6f3qv"; depends=[Biobase]; };
-  leeBamViews = derive2 { name="leeBamViews"; version="1.10.0"; sha256="0s9brwvhmmylbs7fjkg4g72kd6kdycy0qmk5hgldz3n266pna293"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges Rsamtools]; };
-  leukemiasEset = derive2 { name="leukemiasEset"; version="1.10.0"; sha256="1n3np631cbdvd809af4s9ngrz2lrvclb313dwz6zhjsp0y0gs6n9"; depends=[Biobase]; };
-  lumiBarnes = derive2 { name="lumiBarnes"; version="1.14.0"; sha256="1bagqlq1j6z578zal05xxvvqnfi33rrlgbdq7sj484wyr6jbgxim"; depends=[Biobase lumi]; };
-  lungExpression = derive2 { name="lungExpression"; version="0.12.0"; sha256="1lqc2rcsyqzn9799ak61dgrb917f9cfgn7x7ck0d4629sdczm7x7"; depends=[Biobase]; };
-  lydata = derive2 { name="lydata"; version="1.0.0"; sha256="1c1g17q3ffc4k82ppb1vzi3567wza2q8p06ahd9xnni5hmb5v8jv"; depends=[]; };
-  mAPKLData = derive2 { name="mAPKLData"; version="1.6.0"; sha256="02vx2v0sdzgwzpcgcnszs8q4jdimsis6lyfq6f4pm4b7fccy1as3"; depends=[]; };
-  mammaPrintData = derive2 { name="mammaPrintData"; version="1.10.0"; sha256="1pn0i0bhjs2kyrafafhh8kfgvs0x6nnny8p6zpnivyn4y8hjh5lf"; depends=[]; };
-  maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.18.0"; sha256="1ijr4856mdfapcpbmndxhllsvmhih1cra8zm6k9wz1id29b12s2g"; depends=[]; };
-  metaMSdata = derive2 { name="metaMSdata"; version="1.10.0"; sha256="1f2f7798j1pc74414mvx48w6bbxbsk2rm7l1298sfl1av914yl7a"; depends=[]; };
-  miRNATarget = derive2 { name="miRNATarget"; version="1.12.0"; sha256="0k5vgccwfnybbwngbzyz1j98h9jwidv3ypfymz01yjr6cahn5fgv"; depends=[Biobase]; };
-  miRcompData = derive2 { name="miRcompData"; version="1.4.0"; sha256="1gabbbvnmw38snv2zn3i3763n4r38zr9rv854snmy9fhykry0rlq"; depends=[]; };
-  minfiData = derive2 { name="minfiData"; version="0.20.0"; sha256="1gg2dg3s92vqnigdg56j91zifv2kl9asiqrrbjmac0pyd0vi555c"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; };
-  minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.0.0"; sha256="1dmjdfnwia8ka2lya1fin4kj6anjn9szhphnypzhaxxzmli11x2a"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; };
-  minionSummaryData = derive2 { name="minionSummaryData"; version="1.4.0"; sha256="19xlsnfcr9fh7f3nmd0aj6sd03c0bd6ibfbx4rkxsmgfsdfvidzh"; depends=[]; };
-  mitoODEdata = derive2 { name="mitoODEdata"; version="1.10.0"; sha256="1br92nqvfhc67dsz2b10mzp19rk8bbfb9zaawk6n4pyfn4pdcn4w"; depends=[]; };
-  mosaicsExample = derive2 { name="mosaicsExample"; version="1.12.0"; sha256="0fgb8ifaygs31ck0xybwr5p85zvkw236lilzcsn9hnsdp2zckkff"; depends=[]; };
-  mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.12.0"; sha256="0g2g5kpgpv436k09n43jilzb539faqvp9k41h3xfgw8kqsln10fp"; depends=[]; };
-  msPurityData = derive2 { name="msPurityData"; version="1.0.0"; sha256="08kz9ihbjxfi64sds5s04ay9g8y1y6fjyaxvd2mvqvzwd3hykzqh"; depends=[]; };
-  msd16s = derive2 { name="msd16s"; version="0.108.0"; sha256="0gcs6r3z40lc8rsnlnkf01qbnws7bcvi19gx6r2jrlbma14sb22f"; depends=[Biobase metagenomeSeq]; };
-  msdata = derive2 { name="msdata"; version="0.14.0"; sha256="0330ahsx2a5rbqp8kswrq5r85kj5mvv9j5w0bx648isya6j5fzsq"; depends=[]; };
-  msqc1 = derive2 { name="msqc1"; version="1.2.0"; sha256="03f3jlpl2q9kkb1q2bzxda5yddgpwhhnbb5y209j101yf2z1qv4b"; depends=[lattice]; };
-  mtbls2 = derive2 { name="mtbls2"; version="1.4.0"; sha256="02dzwsjagrwgnrsp16h72x3sgl5gms8xnv0vjbfm9m6ynjcfr2y2"; depends=[]; };
-  mvoutData = derive2 { name="mvoutData"; version="1.10.0"; sha256="1hmsk9zlxrqf5znf0rlj1rmsdzdwvr8xnxz6q85ggrr1l9n76g3c"; depends=[affy Biobase lumi]; };
-  pRolocdata = derive2 { name="pRolocdata"; version="1.12.0"; sha256="09wisspjxaim23w0lhbk5sczghfjsn00f7qc6zp8d7rvp511c56k"; depends=[Biobase MSnbase]; };
-  parathyroidSE = derive2 { name="parathyroidSE"; version="1.12.0"; sha256="1ibf9wia8vn0vmg46rln7lkpd1mm5ahc3cb2kxkzinmsvmqbi2nn"; depends=[SummarizedExperiment]; };
-  pasilla = derive2 { name="pasilla"; version="1.2.0"; sha256="0qhmrx4gxprjyd79y3jrx3s8ya6f64jq69lf8ykwgr21h7nsacbl"; depends=[]; };
-  pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.12.0"; sha256="0ib1n90k231qckd4kv2wjkw7xxc88gc8h651r06rqalgmldfxg8r"; depends=[]; };
-  pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.10.0"; sha256="1n6dbsq6nbalv4iil2qycwzx84710sz16m2qqq44cgjw2pqmp8ki"; depends=[]; };
-  pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.10.0"; sha256="0gr4xc1kah9n9j8q2yq3an780p8l8qgrba06vc8yw28q9s14lcic"; depends=[]; };
-  pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.10.0"; sha256="0xr0qw6z7dm7brp118bdjh53j83pgxgsbfyl2b1s4qdcqp0b0j5i"; depends=[]; };
-  pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.12.0"; sha256="0lv60jkg8zqhbz1hnc206zmxpvz961plgj3s2zxl925pzqgw3jdf"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; };
-  pepDat = derive2 { name="pepDat"; version="0.108.0"; sha256="01biimjr6j6z1plgsbq9qxk4bzg6mc5v0f5lzwwid8r0n6aq9nfk"; depends=[GenomicRanges]; };
-  plasFIA = derive2 { name="plasFIA"; version="1.0.0"; sha256="1qqs5n1zbp94p9g87rah3ikdl7gir0m76nyd7ccd232dxkzyl25r"; depends=[proFIA]; };
-  ppiData = derive2 { name="ppiData"; version="0.12.0"; sha256="05cg5hiv314a88wfwnd9milfcin0xmsvvn1zzxqhrj8k7j0smxq9"; depends=[AnnotationDbi graph]; };
-  prebsdata = derive2 { name="prebsdata"; version="1.10.0"; sha256="01z22jg4l2l55nrb547xih5ra3rcla4k66j1f210rrsl4r5j89wn"; depends=[]; };
-  prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.2.0"; sha256="0xg4xwj0m892lsix27bmi23dssl6fx3y93g14mwnlpq430135j96"; depends=[Biobase]; };
-  prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.2.0"; sha256="189iyjfaylck58w0pg3xnrpg6yld304dgprpsvfjhmrc306v1q79"; depends=[Biobase]; };
-  prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.2.0"; sha256="0h9909wl798nalf1x8qc4p0yx6851r4pda24y7vyxvy2jrrah3kq"; depends=[Biobase]; };
-  prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.2.0"; sha256="1ncri2z1sz4kb0a080y4xhf7ah3szp890h6b3xvmc5c6i8h2pysz"; depends=[Biobase]; };
-  prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.2.0"; sha256="1kffm7b9rhb6jqsz354almakc2dc5zxczhzg9l2wj59knw6527js"; depends=[Biobase]; };
-  pumadata = derive2 { name="pumadata"; version="2.10.0"; sha256="03xx41j8w6lip7rsj0fpnq4jrlmhki63wqnmfh9816gc8g7a5yrh"; depends=[affy Biobase oligo puma]; };
-  rRDPData = derive2 { name="rRDPData"; version="0.108.0"; sha256="05a42rayxnyzajzabvgzrbj56x7sax96g090r529fd4055582s52"; depends=[rRDP]; };
-  rcellminerData = derive2 { name="rcellminerData"; version="1.6.0"; sha256="1c95166shc6yflpgl0wfq26mmr5qypiwhidf0vfkgpp0zk30hfd2"; depends=[Biobase]; };
-  rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.12.0"; sha256="1gc5vpxjgnjpar757x7i5sk7kqy5jhvd11kad1liwfnz694zgkn8"; depends=[]; };
-  scRNAseq = derive2 { name="scRNAseq"; version="1.0.0"; sha256="0zh3bashqamivddjahaisl92d8ipzahki10wq8sz6myrb57iavlx"; depends=[SummarizedExperiment]; };
-  seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.6.0"; sha256="057rs9s9lf6z3z3k1671r0fzk24jl8pmn1zn0a8x2n66d3bpqv4d"; depends=[]; };
-  seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.10.0"; sha256="1g350lys9gdrfkwsmb460y9pbjkzcgxwn22xfsl430mblh09ryhm"; depends=[]; };
-  seqc = derive2 { name="seqc"; version="1.8.0"; sha256="0fik3w4qs9a01x54im5ckjwywvr1w0jvcmb0x2ym0xba4q4ypvlv"; depends=[]; };
-  serumStimulation = derive2 { name="serumStimulation"; version="1.10.0"; sha256="1nl0qi64kihvvp7kkc7y7zl3m938n7mrkw4vrmdshc00j3ydl1k0"; depends=[]; };
-  seventyGeneData = derive2 { name="seventyGeneData"; version="1.10.0"; sha256="1c7zkhv1ijxxy3qiq6rwniay10kqybfqzqysfb94wasp688dixwp"; depends=[]; };
-  shinyMethylData = derive2 { name="shinyMethylData"; version="0.108.0"; sha256="13b3c66ijax8d3cw26wjmx2cjnh06z8dx2ahq0xwic3rj2r8ax61"; depends=[]; };
-  simpIntLists = derive2 { name="simpIntLists"; version="1.10.0"; sha256="1k8rck49bpp7h2why7fl6bvhv67krzhc4c0ppily3ah2s9vyxm0a"; depends=[]; };
-  stemHypoxia = derive2 { name="stemHypoxia"; version="1.10.0"; sha256="1vb3c0k3zrkng95ym4h17y48bcq6xb4izj326w4blajcfyil7kdc"; depends=[]; };
-  stjudem = derive2 { name="stjudem"; version="1.14.0"; sha256="09gi8z5ay7hyikqr26npyhim4dzi2hkidnis46ckzfqx9dlar94h"; depends=[]; };
-  synapterdata = derive2 { name="synapterdata"; version="1.12.0"; sha256="1ynqzxn8a76788chcfq1vw7mrsm7c39qdjzjr42x4lvabr32gd9p"; depends=[synapter]; };
-  systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.4.0"; sha256="1wbf4488b6zmh72m3zpq5la8qybn6gfr89k7r4572i0awgyxccws"; depends=[BiocGenerics]; };
-  tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.12.0"; sha256="1gbab6zlzc7f2ywsv198yyf9fr2yq2a7y942mjclfg7ji0zf81kw"; depends=[]; };
-  tinesath1probe = derive2 { name="tinesath1probe"; version="1.12.0"; sha256="06r5vxqqglrgpqyf3837kxl6rb5qcxk61b1g1vyi15kb7rzz0qyp"; depends=[AnnotationDbi]; };
-  tofsimsData = derive2 { name="tofsimsData"; version="1.2.0"; sha256="1786gqxz4vhvjc0cxc2gi5hz9wnvspb3kmmap1nssjnd44cq8ypa"; depends=[]; };
-  tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.12.0"; sha256="0a6g2lnj5m958yagnkn3fl4x0fw6m4gp9xq0jsv6z7ixs2p73xin"; depends=[Biobase]; };
-  tximportData = derive2 { name="tximportData"; version="1.2.0"; sha256="0618jzzacpl7cipcby5v3rd2rb3x9vqiaf9i1arn83h4znwlnykh"; depends=[]; };
-  waveTilingData = derive2 { name="waveTilingData"; version="1.10.0"; sha256="1ndqbqisfr2vnfqlmjxvwvkcbs042rqvsqhlpa4pg9l18nfv3zqh"; depends=[]; };
-  yeastCC = derive2 { name="yeastCC"; version="1.14.0"; sha256="1sjy4c6jvhpjpr47l0mpa7mms65jj7c1fhv2dxiqxap5pcxl9s40"; depends=[Biobase]; };
-  yeastExpData = derive2 { name="yeastExpData"; version="0.20.0"; sha256="17bassc4xn9amlsa33rscgbkk50xwrz3i3vlh9ym1184wq14jmp8"; depends=[graph]; };
-  yeastGSData = derive2 { name="yeastGSData"; version="0.12.0"; sha256="0s3458lvcn7xpnwkygl426zqm7h35cl59r0rlp0znnrjvr3f16k3"; depends=[]; };
-  yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.10.0"; sha256="1085snsd7wsi9sjsqm551i2bnv8pf234vvz6xpw9fz0inr6m5wqq"; depends=[]; };
-  yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.12.0"; sha256="1rym01mbpn0h70q1c7alhnrqa0c2hb7xmr17qbsh130gqp67c3mq"; depends=[]; };
-  yri1kgv = derive2 { name="yri1kgv"; version="0.16.0"; sha256="0xqlqi665ww3w00g5wv089ydjs74iy07xqzbn19bpdqnkypm83rx"; depends=[Biobase GGBase]; };
-  yriMulti = derive2 { name="yriMulti"; version="0.4.1"; sha256="1s1riipq4ck655m3cds6ffvzr7hg0aa2fhm8gax2b7hwgqr4xmiz"; depends=[dsQTL GenomicRanges geuvPack gQTLBase Homo_sapiens MultiAssayExperiment SummarizedExperiment]; };
-  zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="0.108.0"; sha256="04pbkfqb6l8qgxl1263jhhd7gm8hz908c47q5s1f1nvc3403dlbp"; depends=[]; };
+  ABAData = derive2 { name="ABAData"; version="1.8.0"; sha256="035h4yrna11d2g3iqnn52sv07ydgpa2my4bwcs4a9di0pf9rbm06"; depends=[]; };
+  ALL = derive2 { name="ALL"; version="1.20.0"; sha256="1kz3k99dxam9zqpf1hg4z049f7dliyw3kg9cms1sma2yl5l7nj2y"; depends=[Biobase]; };
+  ALLMLL = derive2 { name="ALLMLL"; version="1.18.0"; sha256="051hhfrz4fx28hbi7fycqqbnij9lxh6spj2xqj37nmqc8wx2qfs1"; depends=[affy]; };
+  ARRmData = derive2 { name="ARRmData"; version="1.14.0"; sha256="0pxwvghyvd3c717lqixkadh79jrv0r0dl80ds688gxgw2pfcwr6y"; depends=[]; };
+  Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.14.0"; sha256="1ynwl9rfc0hdacvdmfdm97ya14jqf8q8w93m2vd58nh62p1jmprp"; depends=[]; };
+  Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.12.0"; sha256="0bbslhfipz0s5ill8p8wfr47ikx2lg1vi9h71rn0wx1v76q5sgpf"; depends=[]; };
+  Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.16.0"; sha256="06q8ixh2zwk4143ppnrdcvgaagzy33swsrlp8l3lqp943fnn2hil"; depends=[]; };
+  AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.16.0"; sha256="1nqdxp33xl2lwcf5lq1v1k2qnid5pf7wxbxldmr0rl6jxlm1r5va"; depends=[]; };
+  Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.16.0"; sha256="1j4czciqiaj2fqf7v5yd41ln31gl6sqs6s07i9pwyclhw66f3y56"; depends=[]; };
+  AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.18.0"; sha256="0bc2cdqvqdalq5hqhnnzayh2klnzqaw6micgsk35mai0lak34rpd"; depends=[affy]; };
+  AneuFinderData = derive2 { name="AneuFinderData"; version="1.6.0"; sha256="0cbgmfciy9v81jfn60mw98csxxdmm3hfqdwyaigbagj949alnbcm"; depends=[]; };
+  AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.8.0"; sha256="1z7kcl25hpl7r7pshz14cm5j635qj451df1pfd9giygn7y9kpf93"; depends=[]; };
+  BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.16.0"; sha256="1yslwgw504xbplq16xnf610rs994p23xm9qcyaa9f0lzhqgkksap"; depends=[beadarray GEOquery limma]; };
+  CCl4 = derive2 { name="CCl4"; version="1.16.0"; sha256="0w1mxf7w1yk7kjqam7xdb11aj16pddk9wyfd1ps0nqagzvjsn1qv"; depends=[Biobase limma]; };
+  CLL = derive2 { name="CLL"; version="1.18.0"; sha256="1zhkf75bhx8z0s4wpjyc0xdv9aifng25gpb8fkvncpd8lmmdg6gd"; depends=[affy Biobase]; };
+  COHCAPanno = derive2 { name="COHCAPanno"; version="1.14.0"; sha256="082cwdyzq3h1sl39pn2c3ix5cp6mjczbvvdh6gii54181qkg8r2h"; depends=[]; };
+  CONFESSdata = derive2 { name="CONFESSdata"; version="1.6.0"; sha256="1ln3s3zk4yi7qjjqnvxg12x7qlnz77k29nbjv5zbpdxdjyisnq4g"; depends=[]; };
+  COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.14.0"; sha256="1qi0l4rf62gzqg14zalcrisklfgbzahhzahyyd5q898r57xgif7b"; depends=[]; };
+  COSMIC_67 = derive2 { name="COSMIC.67"; version="1.14.0"; sha256="11ir7v1xlxwjxjj1dz3i7j1fmq9xnhd3qc7cxippr0w4867cw8pc"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; };
+  CRCL18 = derive2 { name="CRCL18"; version="0.112.0"; sha256="1c6lvzjddm2sxxjz452nmaadhvaz684i3gyvmlibhqaxc9vr09mx"; depends=[Biobase]; };
+  CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.10.0"; sha256="0jlikfjgmjiizm28srbws7sq1b7h45gb22m4q19il13rdpn6rfls"; depends=[Cardinal]; };
+  CellMapperData = derive2 { name="CellMapperData"; version="1.4.0"; sha256="064hbkwxfl2sb4vvvmm44skd34g87vgw6nv0ml8vyhba5mmszf84"; depends=[CellMapper ExperimentHub]; };
+  ChAMPdata = derive2 { name="ChAMPdata"; version="2.10.0"; sha256="0cjwyapqv4d6mncg4jy1x5qfz7sim9vqv6m007d0n05ly02qn4vd"; depends=[BiocGenerics GenomicRanges]; };
+  ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.16.0"; sha256="0bj7j6qzqq6zy87r1sxdnlfqvl5r6rwjm5pd09jf9b27r6bf1r44"; depends=[bigmemory]; };
+  ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.2.0"; sha256="1f1dwqylch21kch88y96h41ma949y1xvfhj5ldqkn4fidb2f90kp"; depends=[]; };
+  ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.16.0"; sha256="1ppybav3ag2x75i1w58prnxvrmjp754ywwgm38kfw3vs55l0ijv4"; depends=[affy hexbin limma qvalue statmod]; };
+  ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.14.0"; sha256="02xffm790lchv78qwxgi0rfmk496hdc2970mm1maa7agy9wk56f8"; depends=[]; };
+  CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.10.0"; sha256="1gbvk32kcax4w143ry8w376gfglqm128sas0pnim4nc1ikd7b7j7"; depends=[]; };
+  DAPARdata = derive2 { name="DAPARdata"; version="1.8.0"; sha256="0rkf6gwcvccci7hal5cxb04b7g8cx46ivvzplgfn5sn4idzj187f"; depends=[knitr MSnbase]; };
+  DLBCL = derive2 { name="DLBCL"; version="1.18.0"; sha256="19bxaapggfx148qvi1jp82026psiv669iga370bqva4dhawgmc8a"; depends=[Biobase]; };
+  DMRcatedata = derive2 { name="DMRcatedata"; version="1.14.0"; sha256="1i1cf4avmq6rrcvskj17gmplfa647fvmml86wkr8skhsj03z5s63"; depends=[GenomicRanges]; };
+  DREAM4 = derive2 { name="DREAM4"; version="1.14.0"; sha256="1z1cddkk8jspnm3h1d4fdc6v14sqflzryqzvvzd0z3fp4lr46vkb"; depends=[SummarizedExperiment]; };
+  DeSousa2013 = derive2 { name="DeSousa2013"; version="1.14.0"; sha256="0jwddzfqfiimcfmz9jwari493dppyxnyf0fp2k2s1bp98d50bnfb"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; };
+  DmelSGI = derive2 { name="DmelSGI"; version="1.10.0"; sha256="066davl2ga9pjl12zcgchmsprx3hz6zsb2zpnrpbijd0yqv8fjih"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; };
+  DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.16.0"; sha256="1za9anbfb36c1js2qhgqgxsjmkxfhkzyfyizzvqn1v31r101hsq7"; depends=[EBImage]; };
+  DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.14.0"; sha256="0315kbc8fsn95325jlr2b83094f4mnk4pc5sihw0n0637nfpy7ks"; depends=[]; };
+  DvDdata = derive2 { name="DvDdata"; version="1.14.0"; sha256="0chiajirlaf8b28nhr315429hp2x7mfff7fkax9kqrfz308xbcv1"; depends=[]; };
+  EGSEAdata = derive2 { name="EGSEAdata"; version="1.6.0"; sha256="1fvfs8bnf41fz2skahj4gxczqkgspnga84rlsrgd0shhrkmns9hx"; depends=[]; };
+  ELMER_data = derive2 { name="ELMER.data"; version="2.2.2"; sha256="1w1zs37bsj1c6ywvdbjqilg5wndnmysb0w6sbaashd39z6w9iwpa"; depends=[GenomicRanges]; };
+  EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.16.0"; sha256="19id2z2mzjjnxa956ppjhjq1a4gk916cd7k9cqs39lsbxvknp7nr"; depends=[GenomicRanges rtracklayer ShortRead]; };
+  FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.14.0"; sha256="1bkgj1czb6ap7xx53bzwrd4azbfkpxcznmdvl4q7jgd34l1ms78a"; depends=[]; };
+  FIs = derive2 { name="FIs"; version="1.6.0"; sha256="1b6cvzljgcpq9vzs92yjnnxm741ypjw13c9lnzh3qjv73nfgp5l9"; depends=[]; };
+  Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.14.0"; sha256="1c0zdhk81g30v7yq6xvhanmb550xdaann6f4sskbvy5fa6kb04gz"; depends=[Biobase gplots limma VennDiagram]; };
+  Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.14.0"; sha256="081ki0yjdqngsdibpjnjs8lk10wfvgr9i5i99c837hl9wgfwd9v4"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; };
+  FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.16.0"; sha256="09sb67dnv97ijljayiny3p45ddd2c01pd8pjj15sjjk8717lf65v"; depends=[minfi]; };
+  FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.6.0"; sha256="16wvbfym2mz9ypmym2j3j5f36vdj100anc5hpwvpzh9ing62b00r"; depends=[minfi]; };
+  FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.4.0"; sha256="06f2zmkqzkrhwdx58pxzcvkqbckzg9k6qjlngbmgnnb9mi0hx8l3"; depends=[minfi]; };
+  FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.14.0"; sha256="19h4xvlsl61bpkdqqfrqw4iz9v0pnfxp1q8z9nn9m9wqf9cc3rkc"; depends=[minfi]; };
+  FunciSNP_data = derive2 { name="FunciSNP.data"; version="1.14.0"; sha256="0zsffyhd9nxsg3a34sd2mycbvs8dsw96pqn1jj7zw5whldjihjwh"; depends=[IRanges rtracklayer]; };
+  GGdata = derive2 { name="GGdata"; version="1.16.0"; sha256="0s5wh3nxynxx4skgyxvbm4l7lk6rphcgwh71nr24a0a4jid0jisp"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; };
+  GSBenchMark = derive2 { name="GSBenchMark"; version="0.112.0"; sha256="10f5g78mqlzm3ygix8h08134k41c7k9l3j39q656jpdwmf3plkh0"; depends=[]; };
+  GSE62944 = derive2 { name="GSE62944"; version="1.6.0"; sha256="031x9w6xcgk30ihmgxxlxrn0xjm076s34cfyhw5pap6f3f0x8hi6"; depends=[Biobase GEOquery]; };
+  GSVAdata = derive2 { name="GSVAdata"; version="1.14.0"; sha256="1zqm9g1vib9r6rsj7wim2pkv17pl1136k3k5rxmyvgx7rl1sb5li"; depends=[Biobase GSEABase hgu95a_db]; };
+  GWASdata = derive2 { name="GWASdata"; version="1.16.0"; sha256="15zki8i7mv59xr6rgfmf0x33mkvf8fv6h5ya35iydx5409lyaxm8"; depends=[GWASTools]; };
+  GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.6.0"; sha256="02vwxdb4dsmx3iw3p8hfvigw67hrggycdxkqpkr1n03z6g50vbcv"; depends=[]; };
+  HD2013SGI = derive2 { name="HD2013SGI"; version="1.18.0"; sha256="102hv9ivrmdjfrqnyg9g3qi4y2i9kdby9xswlq5l7l14vbgqxn6b"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; };
+  HEEBOdata = derive2 { name="HEEBOdata"; version="1.16.0"; sha256="1spmx6lc0cpcwcna2sm5mn27n66rxpzw30biq11ca2j7ax0phh8v"; depends=[]; };
+  HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.18.0"; sha256="12gi6idn1vgl13ir93ig60mmgfak5l35bgzc75paa167iqvfswff"; depends=[]; };
+  HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="0.112.0"; sha256="0wz7kfj2mkrg4q53w3ddj2l4didlmckkck5a80vk51pflfvxrdhi"; depends=[]; };
+  HarmanData = derive2 { name="HarmanData"; version="1.6.0"; sha256="104ws2bpy865m2hjfgj1bha4ix6kk96ml085lksz9vszkxhi7al9"; depends=[]; };
+  HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.0.0"; sha256="03czwi1ps7lpjppn5mpfa013rna0z3ywb783a31yv7g93r97gqna"; depends=[ExperimentHub]; };
+  HelloRangesData = derive2 { name="HelloRangesData"; version="1.4.0"; sha256="1c7gfhwr9g6hv0p3s4yd8v9rhjp3jmrnzsqsqq4ysc2i24nf7drr"; depends=[]; };
+  HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="0.112.0"; sha256="1qxg7650lbfbjl9p75clrybsdbzd0yzpi8pi2biv83jgqkkjrd0b"; depends=[]; };
+  HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.14.0"; sha256="0708xgm495a330h70yi2qd494h6gf0n46j016mw9bc4gzbb7aq9p"; depends=[]; };
+  Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.14.0"; sha256="0lah9l8gd5gs1wj68l9hqakcwha0rl88dg2p0zk92nff64jxn3pj"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; };
+  HumanAffyData = derive2 { name="HumanAffyData"; version="1.4.0"; sha256="0xgb3rrvgrx6sdwbb8gb1q8mgf0s2giih8l8d3hzvnxazh80qs8b"; depends=[Biobase ExperimentHub]; };
+  IHWpaper = derive2 { name="IHWpaper"; version="1.6.0"; sha256="08gkdi1lra9mn1cbsqddqn3pwj3pfy2yfgzay5igr7n1akfmgh7k"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; };
+  ITALICSData = derive2 { name="ITALICSData"; version="2.16.0"; sha256="1rrfxc3hzlq2i0z5j432w3s33ln56i91a06q49piisz06vviz6yv"; depends=[]; };
+  Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.14.0"; sha256="12mdy4rb8gzhgdqdwvf96lcxmi37wysyanpw1dym03vq6fxmcfrq"; depends=[]; };
+  IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.16.0"; sha256="149ip8wvbiz2k94rj6n1ims4iq7zkgicrxrkn059bvxgj5gm6pvq"; depends=[]; };
+  Iyer517 = derive2 { name="Iyer517"; version="1.20.0"; sha256="1s4ya32pfmz3fil7v3r8zm13f80cx5zny0ywvh6ln27a7hr10ida"; depends=[Biobase]; };
+  JASPAR2014 = derive2 { name="JASPAR2014"; version="1.14.0"; sha256="03mrbgyx3jf4ccapyj04akf40aqbmky03fgicgcaff724kwda8rl"; depends=[Biostrings]; };
+  JASPAR2016 = derive2 { name="JASPAR2016"; version="1.6.0"; sha256="0ki62mfjk7a6nsk0079xf3w8c8an3syy5rhlqcmyynwab344mqm6"; depends=[]; };
+  JctSeqData = derive2 { name="JctSeqData"; version="1.8.0"; sha256="1zd270pxiy1d5jr9akgvf77jbllw82flrhx3q1z1m0kds7xlb398"; depends=[]; };
+  KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="0.112.0"; sha256="0w1x4ab9i40y8jp3yhwcv0lyh83g926cwav77m179mg7n9l6c3lv"; depends=[Biobase BiocGenerics]; };
+  KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.16.0"; sha256="034j38cd81fkay7h7fjjk56ywhvbq6pdc0ldxizrfw3z8hhacy85"; depends=[Biobase BiocGenerics]; };
+  KOdata = derive2 { name="KOdata"; version="1.4.0"; sha256="1difb3nsalc5rl9bbaj0g99d5sl3sjlmcy4qq0mddaagw4b5lyrr"; depends=[]; };
+  LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.16.0"; sha256="1z86ll0kpmd9jq5nq7fi2yhvp3ifqfmjk7gfpgd2mq28zw8rwn47"; depends=[IRanges KernSmooth]; };
+  ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.10.0"; sha256="18k3m8k0jdry8qih7nrd7sxlvpcv1yfjj1a6y6a2ifmjq23ymcsl"; depends=[methylPipe]; };
+  LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.14.0"; sha256="0x0rl6iibspl9w82kbbv7bf9mfhs60j8ly7cxm908x5xfzwmms05"; depends=[]; };
+  LungCancerLines = derive2 { name="LungCancerLines"; version="0.16.0"; sha256="12k305wv38grgdkypr7bvhxd1ca1vsxmyz7487yfv1nl72sla36a"; depends=[Rsamtools]; };
+  M3DExampleData = derive2 { name="M3DExampleData"; version="1.4.0"; sha256="0wq5vmk8p3ng8snljrlkwx6vl38fnwq8fn5flymfnq1snvci22h2"; depends=[]; };
+  MAQCsubset = derive2 { name="MAQCsubset"; version="1.16.0"; sha256="06vmzicndnyb4banfjv2mgy77cqqbdrx0y7pxyvvpfy5xl1kk3ii"; depends=[affy Biobase lumi]; };
+  MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.16.0"; sha256="0jfq8pc2arpp5kcdhsgvz08nm7sjambh7sx1n204glqm61mv5rqw"; depends=[affy Biobase]; };
+  MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.16.0"; sha256="14p1ifaadmkpykgh675gk03aspc1159k8s9ksz17p6bxkwy2sb6v"; depends=[Biobase lumi]; };
+  MEALData = derive2 { name="MEALData"; version="1.8.0"; sha256="0r4c7vx2cpix5ryjv7314zf30ifivad7yj1wi7a0pck6rjbny81j"; depends=[]; };
+  MEDIPSData = derive2 { name="MEDIPSData"; version="1.14.0"; sha256="175bzk0yrwhkwagpkvi8y87l8zfhgr44xkpkw4jii3whpyxgaiyx"; depends=[]; };
+  MEEBOdata = derive2 { name="MEEBOdata"; version="1.16.0"; sha256="1110sgklk2lmvjggvcm3wzfipij6nj8brq7bdc9dbjwhiiqdv0m1"; depends=[]; };
+  MIGSAdata = derive2 { name="MIGSAdata"; version="1.2.0"; sha256="0vx8p949sxsfp9ajs4dwh2yf01l9lclngr7ync3r962knmd74yc6"; depends=[]; };
+  MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.14.0"; sha256="1s0fraym521bv35q2ms1v6jv23bvfypwkhcy8ffhf6k1lcr4q7gj"; depends=[]; };
+  MSBdata = derive2 { name="MSBdata"; version="0.16.0"; sha256="0lygk817f55agf4rvb85k50ns0cy8wckbqvwqb3w22z4plixyjjf"; depends=[]; };
+  MSstatsBioData = derive2 { name="MSstatsBioData"; version="1.0.0"; sha256="1hgwcd4r8x489hyz747psyw4jfbia6yw5mjrm745z1yl8y445mq9"; depends=[]; };
+  MUGAExampleData = derive2 { name="MUGAExampleData"; version="0.112.0"; sha256="05gjfd4vvkp4mdrimsxjwa3mgps1cwdwr03w1il77awa23fvqp52"; depends=[]; };
+  MethylAidData = derive2 { name="MethylAidData"; version="1.10.0"; sha256="1rklalmjckm5ysvfjy4arqafabjp8w4495v385mgwrlv6rqa5yv7"; depends=[MethylAid]; };
+  Mulder2012 = derive2 { name="Mulder2012"; version="0.18.0"; sha256="1bpc74xiyh1az8nkgqpwk3pa2313r7qcxdzdqa7sr8drwhgj7hbi"; depends=[HTSanalyzeR igraph KEGG_db MASS org_Hs_eg_db PANR pvclust RedeR]; };
+  NCIgraphData = derive2 { name="NCIgraphData"; version="1.14.0"; sha256="0764l9lxc64fjflzqqxyjckxrsjxk89k73g3kpdfmkvxdn7nchh7"; depends=[]; };
+  NGScopyData = derive2 { name="NGScopyData"; version="0.112.0"; sha256="073g9krsmhdh3fygqd3rfxnakxn45nvxs0zr7k6xylq06yfy3gza"; depends=[]; };
+  Neve2006 = derive2 { name="Neve2006"; version="0.16.0"; sha256="0dvdq54jp5q59iwny008m1qyj9s6gb4blmzjlsnz3505ivai2mgs"; depends=[annotate Biobase hgu133a_db]; };
+  OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.0.0"; sha256="1wffaljwgl0r051bj5vf0wjch2vg5y8pkwgbhdg6k6c97pf9gyd7"; depends=[rJava]; };
+  PCHiCdata = derive2 { name="PCHiCdata"; version="1.6.0"; sha256="1dqhwz6jqgmnvias2hjlnj10c0chsvhj904rgvk0ch9y47v0f4yx"; depends=[Chicago]; };
+  PGPC = derive2 { name="PGPC"; version="1.6.0"; sha256="1nfkj3ipl52xscz8qpmaspydvfzsjacrw89alhxpgsb71d59nbkj"; depends=[ChemmineR EBImage geneplotter ggplot2 gplots imageHTS limma plyr RColorBrewer reshape2 SearchTrees splots]; };
+  PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.18.0"; sha256="19528l0f53nfnq1sdsbp3y6z5zx933csz5f72mh43408a6d384rk"; depends=[affy annotate Biobase PREDA]; };
+  PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.12.0"; sha256="0s3dqm1yiy4svkb6cj6xf6i81cc0mai0xjlbl3jvqdpy7npl0a08"; depends=[PWMEnrich]; };
+  PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.12.0"; sha256="14wqs4lxq1zav24znvqmkzbbqfapplg7xib9kbcxnqxkr509x4fz"; depends=[PWMEnrich]; };
+  PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.12.0"; sha256="1zmrv53944s7a6cm96m2wgj6j9cfg5kjwgdfalkmii3vm400f6lr"; depends=[PWMEnrich]; };
+  PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.6.0"; sha256="0wxf6p5r7h9zaxkzg1bf294d837klwscbd0gcxms26hgdj7pv2d1"; depends=[]; };
+  PathNetData = derive2 { name="PathNetData"; version="1.14.0"; sha256="1k5npvxijzf3f7fxkmljajmjmfpkd36q8a2zpn24c4v19vglnmzx"; depends=[]; };
+  ProData = derive2 { name="ProData"; version="1.16.0"; sha256="0vgs9xnwrqfn8px4c4q0y3kxfwk5zldwpykdhkjn63ycamlfmq25"; depends=[Biobase]; };
+  PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.4.0"; sha256="1qilqzfmhb4fq2rkafy200s94gaj9ln6c0j8gw3q5ql6kzclkq2i"; depends=[CAMERA LOBSTAHS xcms]; };
+  QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.8.0"; sha256="13b72z76z5nqb2snga4rn0jrsd12c13x4b1q9i15j2lxnklcw11w"; depends=[QDNAseq]; };
+  QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.8.0"; sha256="17azrrn9fkiq1z4xxcg2afwh25iyvi93lq9p13zcpzg75fx5ccvc"; depends=[QDNAseq]; };
+  QUBICdata = derive2 { name="QUBICdata"; version="1.6.0"; sha256="01i0n2sbi3l5gmkrvnc5r1c3fv57xli1fav7yal1x6vckqgma2ba"; depends=[]; };
+  RIPSeekerData = derive2 { name="RIPSeekerData"; version="1.14.0"; sha256="0znhpk57bivhn94vd1czcrhcigi8wcascx9ycvbvfnbnibpwcsac"; depends=[RIPSeeker]; };
+  RITANdata = derive2 { name="RITANdata"; version="1.2.0"; sha256="0jl1grvgmrvvv5f4p0s6ypcpfbdlrc1s0pqqib7fw1qi1hmik5rj"; depends=[]; };
+  RMassBankData = derive2 { name="RMassBankData"; version="1.16.0"; sha256="15i1yy7vhwbz3vjkcdgybqaiwr3x7w9fplscachb3xpw6d5g52n0"; depends=[]; };
+  RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.16.0"; sha256="0z3ijyvkajpa08d6i1lb1bfkfwhqkjizwn17hrinps3k9bzymni6"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; };
+  RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.16.0"; sha256="06ja4rm3f310vj1sa473njsgaagmr3zz04pj3qp5cpq1pdcgsmfi"; depends=[]; };
+  RRBSdata = derive2 { name="RRBSdata"; version="0.112.0"; sha256="1vjh1x652ll33sjahair95n1l98z847ks2907g84sbkwhvfzhkrm"; depends=[BiSeq]; };
+  RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.6.0"; sha256="0grqjfiwi9i6whgiz73xz2havcwzjf3r23rg5wvxhk1bapxidxgv"; depends=[RTCGA]; };
+  RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.6.0"; sha256="02mr0kn5hf2nqi2s7lk440c6a3n34a8apb1j7rpi8nxp4lp757if"; depends=[RTCGA]; };
+  RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.6.0"; sha256="1mjxpdwziv0xy00hn0n7r0bvgh1gagrw77b5jnla3pz0nzhqwwhy"; depends=[RTCGA]; };
+  RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.8.0"; sha256="03m4rzzwmjzj1ijg10ir1d5nmix04l0mi2jkddiqgq8ryl231dk2"; depends=[RTCGA]; };
+  RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.6.0"; sha256="0v4z9hi9n8fxlk1gph7xapz2sgrakzm32xvl4qyjvqcfzmrvsjzy"; depends=[RTCGA]; };
+  RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.6.0"; sha256="1dcqjfkjncxa32j2dp1dlhfl7cjlr5gpzsxvbals420sqn6pbh0b"; depends=[RTCGA]; };
+  RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.6.0"; sha256="0iydym4bggbdwcnb916wqx9d8xxdm3aqbilknf31fvn7gyx76n5x"; depends=[RTCGA]; };
+  RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.8.0"; sha256="1jyg1h1g6bkz0rvpsb0y2ksx2k8s1lm6i9jrkj5b9p9sv28fdiz9"; depends=[RTCGA]; };
+  RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.8.0"; sha256="01s06w9aavgr19jf3kswxb2bg4v5r3j5md17j4qf698l82pjkigq"; depends=[RTCGA]; };
+  RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="0.112.0"; sha256="1sf4fbrgcmq4jy3g4kh8xlbmvvs6ww9s8p0z8cba2ga0v440nzk4"; depends=[Biobase]; };
+  RforProteomics = derive2 { name="RforProteomics"; version="1.15.0"; sha256="1jjc0hs6nmx56l5gl5rgqkrpv3shdwl4qjvn25ayv6dbvxajifw3"; depends=[Biobase BiocInstaller biocViews interactiveDisplay MSnbase R_utils rpx shiny]; };
+  RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.10.0"; sha256="0ixc2vhfm8y51p7iycr1mv98dacazj6f7bn5naffy607d9ryylb2"; depends=[GenomicRanges]; };
+  RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.10.0"; sha256="14h4lqx8jymla7immhiisxkcch5pki26yk9ywgh2mwwkz5b3lmlr"; depends=[GenomicRanges]; };
+  RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.10.0"; sha256="0adds1l1hp4cv98jzf4jp6rhwfyv63dnzcp7gzb91wq9wmmhh81w"; depends=[GenomicRanges]; };
+  RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.10.0"; sha256="1a4389ds0kpq8q1brf7r7f368x7077qf1x53amixi4s15z3sqxzl"; depends=[GenomicRanges]; };
+  RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.10.0"; sha256="1q7gqs3n9cv6fn95n79ir6p2jxccdx133az4f3ab198kxbdkn5bc"; depends=[GenomicRanges]; };
+  RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.10.0"; sha256="0mimmfhssjr1h2fb8h0m7gjaw5z80vsnzjlckx9cmirn9112z3iz"; depends=[edgeR]; };
+  RnaSeqTutorial = derive2 { name="RnaSeqTutorial"; version="0.16.0"; sha256="0p11ykzr0ypxsn3y0dwpggm826dszl3jzplvpzs60xgplj178m20"; depends=[easyRNASeq]; };
+  SCLCBam = derive2 { name="SCLCBam"; version="1.10.0"; sha256="1ivxp3pi9dskh2q331dfpc9vz8g3x82sickmhk86mnhr8zwbkx6w"; depends=[]; };
+  SNAData = derive2 { name="SNAData"; version="1.24.0"; sha256="1384y6jj8w380qppd9n80s41vz2g7lrlmckjszga0csc1qxx8dd7"; depends=[graph]; };
+  SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.14.0"; sha256="08myr18h36rczaqvrg2ckhrkivayspcr8p6p4400ynmafk8ihkkz"; depends=[]; };
+  SNPhoodData = derive2 { name="SNPhoodData"; version="1.8.0"; sha256="1v4cp21h05yi6n26by8nnwajk0kl7qjlh4n9c9r81g7m35qyz7ny"; depends=[]; };
+  SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.10.0"; sha256="1hf6lz6k6xvlda7pbp4k3y15a9bid5k3r1fv64slj2d7ahpcqzph"; depends=[]; };
+  Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.6.0"; sha256="01rm6rhi7izycsbf4qmpn8bnkklh6r7c19dnb3p4mrw14ykcxsf0"; depends=[]; };
+  SomatiCAData = derive2 { name="SomatiCAData"; version="1.16.0"; sha256="118cdjbaydibr8vi7jgf3jys0izph8d7986gwnq9fawbswdbhpp8"; depends=[]; };
+  SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.14.0"; sha256="0nzvc808lr3yp1gs60ifyq6ig52fqp1wy1pxazjcdsrxajpm8hl4"; depends=[exomeCopy GenomicRanges IRanges S4Vectors stringr]; };
+  SpikeIn = derive2 { name="SpikeIn"; version="1.20.0"; sha256="1i38m224mdak52cd469nnm7q7f7llmwym9h03ldcs2i9azxp5dix"; depends=[affy]; };
+  SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.18.0"; sha256="0byb8gh2s7wlfdcnq9fkr92w7lxwrz48nlzprxd5b4kj91j1fdq0"; depends=[affy Biobase]; };
+  TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.14.0"; sha256="1vdk2z4jljwy4kpiy0bkf5ymx0hrc16ardh5rg1xvkra58z79p2j"; depends=[Rsamtools xtable]; };
+  TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.14.0"; sha256="0nw9q0gkna2qja720hf766ppilxpi8m2plz68laxhzbc8bgq4g8v"; depends=[]; };
+  TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.2.1"; sha256="1ipl2lxwcp5ybzxw5hpa00c2syb5l8nnmdbdwchnbwj6j8gm97ly"; depends=[SummarizedExperiment]; };
+  TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="0.112.0"; sha256="1jpqpnyv3sc6pwh88gfpgc0dyypyi5fy1fim7ybggkc4zv2q69cf"; depends=[Biobase]; };
+  TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="0.112.0"; sha256="19965mwk4020xhs206n3gf8v85flf5qf2lnv6hsjfdsmi9clma4j"; depends=[Biobase]; };
+  TargetScoreData = derive2 { name="TargetScoreData"; version="1.14.0"; sha256="1y39vdd7h90yw3rz68cbdv55hkw6a7d73ld0l8ihpy3l6ppqa2vz"; depends=[]; };
+  TargetSearchData = derive2 { name="TargetSearchData"; version="1.16.0"; sha256="1zhwnpd2n5wydv7xi9ny8zx1riff3caj3lxr40g1fr1ps35vjdww"; depends=[TargetSearch]; };
+  TimerQuant = derive2 { name="TimerQuant"; version="1.8.0"; sha256="0cryfc9qm6mnp0hnznqna372qi00cgjvc1793hrmnx9qkcyiszdf"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; };
+  VariantToolsData = derive2 { name="VariantToolsData"; version="1.2.0"; sha256="0gp2ij4jbwmqhi76a2cnn7wrg227vzvdkwczcsdhawxdjkys8q7h"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; };
+  WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.10.0"; sha256="0d3zixbpchvgzrrslsqgp784w3wswqlp50462ry8b871qaqvh16j"; depends=[]; };
+  XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.16.0"; sha256="0z9rfxr3w0rgd6hqp36i24590scng6hcs9k82am7hvnp54jd3zif"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; };
+  affycompData = derive2 { name="affycompData"; version="1.16.0"; sha256="1l9mp2l41y1gbpv3yszq8bk5lrnbar8ga03ga14fsj1a4a3hzng9"; depends=[affycomp Biobase]; };
+  affydata = derive2 { name="affydata"; version="1.26.0"; sha256="0ridqhk63d49wnsydf0iy5krnymgrjn3nxq7rnlzb85ryvcawqrx"; depends=[affy]; };
+  airway = derive2 { name="airway"; version="0.112.0"; sha256="0b155g62xy39vr58ni6snskyssll8fv0zvn9jln41xacil7f5pmq"; depends=[SummarizedExperiment]; };
+  alpineData = derive2 { name="alpineData"; version="1.4.0"; sha256="02fjs7liwh8m0n5hc0x51c7s718x3pv5a15qrf195bxsrx6qva47"; depends=[AnnotationHub ExperimentHub]; };
+  antiProfilesData = derive2 { name="antiProfilesData"; version="1.14.0"; sha256="1255z9f75hbkzf6sbanck9rfm65z3vzg6kdjyyablh8wxbimjy2j"; depends=[Biobase]; };
+  aracne_networks = derive2 { name="aracne.networks"; version="1.4.0"; sha256="1ahdk71ys4zf426swkyzmkaraz3lsjvn5dp4sdhxkxi5fmsx70mg"; depends=[viper]; };
+  bcellViper = derive2 { name="bcellViper"; version="1.14.0"; sha256="1jw4lfh9p9m9q636jxq69lvjj859b6977k3jrdpjbr0nvr6phwkw"; depends=[Biobase]; };
+  beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.16.0"; sha256="0nbfxln9g8kl18ddzjsmcda1myymyk01ljm9x78cbjcnz6f4w3f5"; depends=[beadarray Biobase]; };
+  beta7 = derive2 { name="beta7"; version="1.16.0"; sha256="0isvwy72d1764fq92h4315dxirvlp2crsgif9amcq13nv4rn40q6"; depends=[marray]; };
+  biotmleData = derive2 { name="biotmleData"; version="1.2.0"; sha256="09vcahw61zz1pbydfl42c28da3y7002956vdb7nbssj6qnp62pqs"; depends=[]; };
+  bladderbatch = derive2 { name="bladderbatch"; version="1.16.0"; sha256="0rmvlvhih00vvcjss8z31cfq5mqv7s7f2ysra7n9jrkb1hinzpmz"; depends=[Biobase]; };
+  blimaTestingData = derive2 { name="blimaTestingData"; version="0.112.0"; sha256="1qqyv21bn5nf876f9l6xjmpx0jz1vrkk5swpp8wjkgsymcvni9fl"; depends=[]; };
+  breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.16.0"; sha256="0k5aqaiqzhxksfiwk2kzzwi7y0c07q8hm7fybn8i1zixvjd8iwfy"; depends=[]; };
+  breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.16.0"; sha256="1iw7apcpvivrqsircvxch1kh1xwqwf797d7psyz8iyckkd9kjwy0"; depends=[]; };
+  breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.16.0"; sha256="15l3x34xj07ja5xvwy9fsbsyccyfgqpxmghbcjvjl2j3lwfhfdb6"; depends=[]; };
+  breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.16.0"; sha256="098rjmq04ycfaj1yw116vgbll5656j5qk3xackidn4y0qkgqg9xy"; depends=[]; };
+  breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.16.0"; sha256="126w884byzkbafn1d1qjp7m27d6mck7d6l23daw41vlrcssxz236"; depends=[]; };
+  breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.16.0"; sha256="0pvn08jhfmnl530la1ldsks9681xci5ivrdawcq7ggh7bxld56q2"; depends=[]; };
+  brgedata = derive2 { name="brgedata"; version="1.1.6"; sha256="0l2g7iwgm1jipz0vsik9dxsqslj7cv49y4mrxs4g9xsr2l9prm8i"; depends=[Biobase SummarizedExperiment]; };
+  bronchialIL13 = derive2 { name="bronchialIL13"; version="1.16.0"; sha256="0v0k80zhjkilnj7f567zq6b994csyhqmmd1xbs3006jmnkbnf2ms"; depends=[affy]; };
+  bsseqData = derive2 { name="bsseqData"; version="0.16.0"; sha256="11drh9nwk7af04nqgm4gn7lpsfxprg9z158l032jiclfv0dhkqgl"; depends=[bsseq]; };
+  cMap2data = derive2 { name="cMap2data"; version="1.14.0"; sha256="002l5isc234cg6hs35rvl2iyql6azjvr7dc3rsp0z9nzh9gmzjrz"; depends=[]; };
+  cancerdata = derive2 { name="cancerdata"; version="1.16.0"; sha256="15w2zy6cz4ivyw2j973x6alianqci1rqk2x3jzsjaadsij5bn6yd"; depends=[Biobase]; };
+  ccTutorial = derive2 { name="ccTutorial"; version="1.16.0"; sha256="1k6f47hf18fwlmjk9k2rkym328q7kwam0yq7mlcavj3w59avydan"; depends=[affy Biobase Ringo topGO]; };
+  ccdata = derive2 { name="ccdata"; version="1.4.0"; sha256="0srpibvjf89b8n8gf01njwg8gbi7a174y3fdcmxilfrfjqc9n2ib"; depends=[]; };
+  ceu1kg = derive2 { name="ceu1kg"; version="0.16.0"; sha256="0dfbm2zyp140n57b9jn05li0bb3dz5cyilmdap2c28fjbyxrqdva"; depends=[Biobase GGBase GGtools]; };
+  ceu1kgv = derive2 { name="ceu1kgv"; version="0.20.0"; sha256="1bl7b9ys59p9mk54vvsxravmq4xy9fxw3xadkbfdapyj79356r4p"; depends=[Biobase GGBase]; };
+  ceuhm3 = derive2 { name="ceuhm3"; version="0.16.0"; sha256="0f8lcws55zixrpwi9m1cqcz0g9k2bvx67h09sxhswswaalqq83xv"; depends=[Biobase GGBase GGtools]; };
+  cgdv17 = derive2 { name="cgdv17"; version="0.16.0"; sha256="1rq6dm0c1d395p7qixrnl7m3a7kzgih5bibxg65rngcs3fpjw3zh"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; };
+  charmData = derive2 { name="charmData"; version="1.14.0"; sha256="1y3lrmc8pqdnn1kqzy7r1flqlhj8yjj74hlrj3m49bi9isbv1yip"; depends=[charm pd_charm_hg18_example]; };
+  cheung2010 = derive2 { name="cheung2010"; version="0.16.1"; sha256="0xhv2zrzlhy4k828kq9rjw3slx1z30g0gwrnz2b9fgrnbd4f8fjd"; depends=[AnnotationDbi Biobase GenomicRanges GGtools hgfocus_db]; };
+  chipenrich_data = derive2 { name="chipenrich.data"; version="2.2.0"; sha256="0iw4c60fpsixn6r5102s3422dlh1vxy4bdfnf8mf8l3893fgj0zc"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicRanges IRanges readr rtracklayer S4Vectors]; };
+  chromstaRData = derive2 { name="chromstaRData"; version="1.4.0"; sha256="10ldrshic91rrjvrc7gi1lhqdnw9g3j00pz6vwhp6qnksr6lxdpi"; depends=[]; };
+  cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.14.0"; sha256="0j9jgjcsjr5vc0k0h7bjlvrln57zbl7pibdk7sxb1p56p49pngq4"; depends=[cnvGSA]; };
+  colonCA = derive2 { name="colonCA"; version="1.20.0"; sha256="1b8kfpr2m5r286ah01jha8js4bvqxw0kk64k1gll96ydi1j6nx7d"; depends=[Biobase]; };
+  curatedBladderData = derive2 { name="curatedBladderData"; version="1.14.0"; sha256="1xwg0m4iijvilhzc7sxspj06pm1ysldasv89yi2vskpilm5y1gci"; depends=[affy]; };
+  curatedBreastData = derive2 { name="curatedBreastData"; version="2.6.0"; sha256="1x3wqxhafhbns7bngbbqzmjxw3rrb0a4xa2z7pdnlhxxij10mycd"; depends=[Biobase BiocStyle ggplot2 impute XML]; };
+  curatedCRCData = derive2 { name="curatedCRCData"; version="2.10.0"; sha256="1h0wys79wr3csq93yvz6rzy964ydjyzfciwjp8099mxrbxsw538s"; depends=[BiocGenerics nlme]; };
+  curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="1.8.1"; sha256="1ip9v0v6lr7xg1j3zww99n0d5ar8l4d3c74mfhl9jg9c27vqcq95"; depends=[AnnotationHub Biobase dplyr ExperimentHub magrittr S4Vectors tidyr]; };
+  curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.16.0"; sha256="15d3g7snphvqh8cgry52lqz7v2l6icxznwcplvp73chkr8skqi38"; depends=[affy BiocGenerics]; };
+  curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.0.3"; sha256="19mm3psjmd6rzr34hcz1h5di8smqppnh73jqnqk6mnhgfy1i39ga"; depends=[AnnotationHub ExperimentHub MultiAssayExperiment S4Vectors]; };
+  davidTiling = derive2 { name="davidTiling"; version="1.18.0"; sha256="1n7axspfh4ph911pj4x2r2dz1xmf6yk9hlnynx7pfmqlgzzcqcvy"; depends=[Biobase GO_db tilingArray]; };
+  derfinderData = derive2 { name="derfinderData"; version="0.112.0"; sha256="0nv2n5417yp8bwdrswbpvni3fg58wl40425f58rdljm4rndk51if"; depends=[]; };
+  diffloopdata = derive2 { name="diffloopdata"; version="1.6.0"; sha256="1ww6raiwr7ymjr4psrgf7q3f59vx32fcc0id9d414z5n8lr4krlr"; depends=[]; };
+  diggitdata = derive2 { name="diggitdata"; version="1.10.0"; sha256="1w275zk4q5hfmjagdpmfa6xls82zkk34wz795lfnccg1bhvhvpj2"; depends=[Biobase viper]; };
+  dressCheck = derive2 { name="dressCheck"; version="0.16.0"; sha256="0x5h4d0hpx1cdlbs2pmylvkhjl46j2vbw8m6za48iv5ksjaxh099"; depends=[Biobase]; };
+  dsQTL = derive2 { name="dsQTL"; version="0.16.0"; sha256="02ha43xn2z085cyjq57d0n7919lj15bpy40kd0j9zwijyfrldz3s"; depends=[Biobase GGBase SummarizedExperiment]; };
+  dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.18.0"; sha256="07ggqj5bz8bna913ryb8wrb9jyr931nlpr5fggil35ms39xqf84f"; depends=[GEOquery marray]; };
+  ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.18.0"; sha256="0pk6livrn8wan6w44kxvhx2s5yjqf5x9gv5pj0mcldirr5fwkyh6"; depends=[affy ecolicdf]; };
+  estrogen = derive2 { name="estrogen"; version="1.24.0"; sha256="0rjf95skgpznzwynfzc4mm5rs518x3ilqavz4250yp6g2yk81gdn"; depends=[]; };
+  etec16s = derive2 { name="etec16s"; version="1.6.0"; sha256="0ms9f8925icf7ylrjz4akf147hii44qq9x3ddj0sy971a6ra8m1v"; depends=[Biobase metagenomeSeq]; };
+  faahKO = derive2 { name="faahKO"; version="1.18.0"; sha256="0a43w7v0sn8z5qyjw0bdkn1jiwzsbxjhpjn9xr5lq1gba4wc15rh"; depends=[xcms]; };
+  fabiaData = derive2 { name="fabiaData"; version="1.16.0"; sha256="0hrn14nwz7xvrd7v0s4b29s22kczj24jklc2yyvij5icjlnr436j"; depends=[Biobase]; };
+  facopy_annot = derive2 { name="facopy.annot"; version="0.112.0"; sha256="0zd7li5yf6bl9vhpaj0sx8ilv7pqyaavscdrr1lw8y980qiggicm"; depends=[]; };
+  facsDorit = derive2 { name="facsDorit"; version="1.20.0"; sha256="1ppmfkrsdcmd47vakd4kxr5y78387wjpyanlhv9pp741x1jiyf5m"; depends=[prada]; };
+  ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.16.0"; sha256="0jla2cblvkahm1qkszx14dmhsjbk5ywz7sbg14s4x5xf0rv537gk"; depends=[lumi]; };
+  fibroEset = derive2 { name="fibroEset"; version="1.20.0"; sha256="1k32m49bhk30rbjryg77jhicjzga970p12wcy5bwzm0qxyj6wvqj"; depends=[Biobase]; };
+  fission = derive2 { name="fission"; version="0.112.0"; sha256="0wgfb85pbs2q4wy59dqpnvvgw63kc9xr0smbjkp482nqv437vg15"; depends=[SummarizedExperiment]; };
+  flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.14.0"; sha256="02cziq2jskrz17s05myqj8w1dfd49crnsga9l19xi67n2gl0dl5k"; depends=[flowCore]; };
+  flowPloidyData = derive2 { name="flowPloidyData"; version="1.4.0"; sha256="09gcy0qv1crz8vfk4s58x054sbhnnfv9mvh1k5vcmlckppimywwq"; depends=[]; };
+  flowQBData = derive2 { name="flowQBData"; version="1.4.0"; sha256="1gvbykmmgl94vmd0g1fccdlshjycll5jvv8vg3h94kx7r3vq8ymi"; depends=[]; };
+  flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="2.14.0"; sha256="10q3nhcbmq75vk1z5zlqsp03d734qmkicsrc25nas2gnbzqmbhwx"; depends=[]; };
+  frmaExampleData = derive2 { name="frmaExampleData"; version="1.14.0"; sha256="11h9hwif6hcc3jaipgf5dvjj3j2rcp61phhvxz45r563m494s83z"; depends=[]; };
+  furrowSeg = derive2 { name="furrowSeg"; version="1.6.0"; sha256="0ds6x0a5qpp3c8776wbq1zbz17i5ymwxphf9zkxgsnrmjw3cpvvf"; depends=[abind dplyr EBImage locfit tiff]; };
+  gageData = derive2 { name="gageData"; version="2.16.0"; sha256="18w5wdaq1j2mndyjfiflawf411zwh1hhjwcxaxrwqnl48p25vg5c"; depends=[]; };
+  gaschYHS = derive2 { name="gaschYHS"; version="1.16.0"; sha256="1c9pq8b2mllpsvwyb7w0gwh66kkabrdfadsqd6hagszbyy9sw2v8"; depends=[Biobase]; };
+  gatingMLData = derive2 { name="gatingMLData"; version="2.18.0"; sha256="1zlxzy9wzzqfm9brd70kdvki5d9r6lsqc22y0m469ybcxypzvan4"; depends=[]; };
+  gcspikelite = derive2 { name="gcspikelite"; version="1.16.0"; sha256="0p0yxm9i4ynhcvshxywxf6d9lhcr32xp7677ywc6q0ikvr6733zp"; depends=[]; };
+  geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.14.0"; sha256="063ivzxw02j854ivv5yxdw7a637svadf9n2zwvc3783y4clkfqb6"; depends=[GenomicFeatures rtracklayer]; };
+  genomationData = derive2 { name="genomationData"; version="1.10.0"; sha256="0h7g5x3kyb50qlblz5hc85lfm6n6f5nb68i146way3ggs04sqvla"; depends=[]; };
+  geuvPack = derive2 { name="geuvPack"; version="1.10.0"; sha256="0lin7wz9xp7rx34wykpmsd5w7hf0jzzfbmnb4klrvlys1c5r9xr2"; depends=[SummarizedExperiment]; };
+  geuvStore2 = derive2 { name="geuvStore2"; version="1.8.0"; sha256="1fhq0r3hnv6k4mfrdhjsaylfi96vwv7j74dkaad92li4pizcz04q"; depends=[BatchJobs GenomicRanges gQTLBase]; };
+  golubEsets = derive2 { name="golubEsets"; version="1.20.0"; sha256="0zsylgc1ml9ddnd5r4magmhn7k3glz50aw9aqvf251zjycasncz5"; depends=[Biobase]; };
+  grndata = derive2 { name="grndata"; version="1.10.0"; sha256="0gqxvngjbxjd40z855vcrc4lqhx9q3b4bgicc371dkglsls4rpgs"; depends=[]; };
+  gskb = derive2 { name="gskb"; version="1.10.0"; sha256="0j36kbyxrrp5h2m7747kprdvhidpcmm14lmqkd1c97ykx5wnzhpr"; depends=[]; };
+  h5vcData = derive2 { name="h5vcData"; version="1.112.0"; sha256="169sg12li7nzd2zv6rj28qc6xfh1l7l9ipybrqa8xyqlcjhpq85f"; depends=[]; };
+  hapmap100khind = derive2 { name="hapmap100khind"; version="1.20.0"; sha256="02pyrd8i1agx31ww4sw6xcwmncibvhqbys072w80rlx3vbjymn3c"; depends=[]; };
+  hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.20.0"; sha256="0vp1wkbz4l9cxld9iazdi59mkrpvinjz6abf34rl7qzbqnckgygf"; depends=[]; };
+  hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.20.0"; sha256="1ddxp4adf5nlr96n89hqjv9f0jvm0zknmwpibp757ic6zrk262da"; depends=[]; };
+  hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.20.0"; sha256="07cmawlx9wdbyzjjj5wh2h1a32d3ascr9h8rpyg6z1pdriq8cahq"; depends=[]; };
+  hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.20.0"; sha256="19wpwai8h0ix4cv17rgz4pz74b0qwby4jc5ry539fb8ls9rzvx1q"; depends=[]; };
+  hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.20.0"; sha256="0qjfmjww0rdma3q2nh6ax64zl7adx4n9j0xhc9s19rz5drsdnifl"; depends=[]; };
+  harbChIP = derive2 { name="harbChIP"; version="1.16.0"; sha256="1hzlxha4nlvqw8ml6pylcmb7y986718yg7ff8hn344yfcigpsqkb"; depends=[Biobase Biostrings IRanges]; };
+  healthyFlowData = derive2 { name="healthyFlowData"; version="1.16.0"; sha256="00mjbla9cwj656s174xbfcdmi8gr1xs7vksazrx25m9yn3dw23jb"; depends=[flowCore]; };
+  hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.16.0"; sha256="1ffamwyl5fax5n6x4nc01gx4kazs73jsm239w943jkx2bwy5j2zf"; depends=[]; };
+  hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.16.0"; sha256="1blm93a5ll7pn1yhbrl8y6wb1yvfvfnc1zq96kr6id9wxi7bl9hl"; depends=[]; };
+  hgu2beta7 = derive2 { name="hgu2beta7"; version="1.18.0"; sha256="15g6lmq6zfg2vkqliadqrmwivw2mldxlrf52myspmfl83scq973a"; depends=[]; };
+  hmyriB36 = derive2 { name="hmyriB36"; version="1.14.0"; sha256="0g642694w0qsf27chdlw1g6924pm20kbgza4w57szcdnschabh52"; depends=[Biobase GGBase]; };
+  humanStemCell = derive2 { name="humanStemCell"; version="0.18.0"; sha256="1nff23qa684xzy35d78sympkns7qa82c8cg21bgff3yhlw2ww2ws"; depends=[Biobase hgu133plus2_db]; };
+  iontreeData = derive2 { name="iontreeData"; version="1.14.0"; sha256="1xj8psicl3yp17i7r6cg9v7rf1wvpz2kck7pbnhwppm7cshqang1"; depends=[]; };
+  kidpack = derive2 { name="kidpack"; version="1.20.0"; sha256="007jlvpcwin2q09v4z79mnplz2176crgngana4mfpmx4sp4sh1lx"; depends=[Biobase]; };
+  leeBamViews = derive2 { name="leeBamViews"; version="1.14.0"; sha256="1dvrfn3zwi5zl8fjp6kyqankqpzi2dhgzyj1dlp1bijy2y09lg7p"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges Rsamtools]; };
+  leukemiasEset = derive2 { name="leukemiasEset"; version="1.14.0"; sha256="1pya637a8yww5cm108w5l1ij2js9mx9mpq7d1miwqdqv2mi0liz6"; depends=[Biobase]; };
+  lumiBarnes = derive2 { name="lumiBarnes"; version="1.18.0"; sha256="1jxk7abi7lkv8627vn9ydnmx6i4ycgicnl91j6r5gi0q3kffmmkq"; depends=[Biobase lumi]; };
+  lungExpression = derive2 { name="lungExpression"; version="0.16.0"; sha256="09v9r6rmfcqprqd1rx53sa4dhjjmg6d9649vlhfhzkyc73yknwmb"; depends=[Biobase]; };
+  lydata = derive2 { name="lydata"; version="1.4.0"; sha256="0dflfp14gdjgy7qf3my0vas5zbg77l16li7xgv1924cry11w2dxx"; depends=[]; };
+  mAPKLData = derive2 { name="mAPKLData"; version="1.10.0"; sha256="1bfx4imb5yg17n0g1ag436zlks4jcp8ga0xj9wyh9bhx4miwyay4"; depends=[]; };
+  mammaPrintData = derive2 { name="mammaPrintData"; version="1.14.0"; sha256="0ks72wnagdvnbilqcsvl5lbhgh64fhbfys0da03336f1z16f5lv9"; depends=[]; };
+  maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.22.0"; sha256="0hn20i11vl9x23mx283aki097r1a8rspagac821kmlwghyab1mxq"; depends=[]; };
+  metaMSdata = derive2 { name="metaMSdata"; version="1.14.0"; sha256="1iygqxymvb98cm325bmdqb34n9b4k1vdzdyzcq8a0gh1dvs2m0iw"; depends=[]; };
+  methyvimData = derive2 { name="methyvimData"; version="1.0.0"; sha256="1b2mvcawafkr15py8h9j10w5givifi99h9clbdmkgfyixbbh0m94"; depends=[minfi]; };
+  miRNATarget = derive2 { name="miRNATarget"; version="1.16.0"; sha256="1ym4wg3g29z7yqmxfxq95yxwc5n048fw3m4bp7dwcq1agnjn5qa7"; depends=[Biobase]; };
+  miRcompData = derive2 { name="miRcompData"; version="1.8.0"; sha256="0h4a3vwzbpzs7rnkn3qgpmfp08a8x8vyy78zb2zl0pgnni7yrdks"; depends=[]; };
+  microRNAome = derive2 { name="microRNAome"; version="1.0.0"; sha256="13fwzf91hdy4vvxg47xkl78qk4jfgn9whj41gl3pqbgxkp7b3d2n"; depends=[SummarizedExperiment]; };
+  minfiData = derive2 { name="minfiData"; version="0.24.0"; sha256="0j5f69k9s0mppb62cffj3kscvvmrrwhf6x3xsw3bc6qdk0f3sv67"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; };
+  minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.4.0"; sha256="12vxglizdyxk4hmj684cwfax4k1rwrz9lmm7khbqzhckzrgiqbny"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; };
+  minionSummaryData = derive2 { name="minionSummaryData"; version="1.8.0"; sha256="1dyr99wi3syzrr6vdxfcp7fjnx9p4gd6raj2r7x83r11g2rndpyn"; depends=[]; };
+  mitoODEdata = derive2 { name="mitoODEdata"; version="1.14.0"; sha256="0vgmalrsnm616la3251p1fvcjpfg0wpv5zaxg20ikdc982zfk4sa"; depends=[]; };
+  mosaicsExample = derive2 { name="mosaicsExample"; version="1.16.0"; sha256="0m2az0wv2lmdwa8c465cnfwmnmxmjz33ras984xbcvkh5a8i3gmw"; depends=[]; };
+  mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.16.0"; sha256="119z7vxd4yrfgjsd286iswklg0n07gzyckib3ivmm285hxphl79d"; depends=[]; };
+  msPurityData = derive2 { name="msPurityData"; version="1.6.0"; sha256="1fpxy34gyngsz7rpr2ng77xb1bylj8s5i500mpbi765cva47lk11"; depends=[]; };
+  msd16s = derive2 { name="msd16s"; version="0.112.0"; sha256="0ii7c6ynif55izkysw12vjphpkxyx3lvw0akfl18ypbiash3qf6h"; depends=[Biobase metagenomeSeq]; };
+  msdata = derive2 { name="msdata"; version="0.18.0"; sha256="16wygr7g7vr3jsw9l6fzajid1cxffdww9pik5m4x55chdliq4f25"; depends=[]; };
+  msqc1 = derive2 { name="msqc1"; version="1.6.0"; sha256="0csm35vzk9dp3gc8yfzli1rwanrah42yxsqssjfbvw5zcijs9npm"; depends=[lattice]; };
+  mtbls2 = derive2 { name="mtbls2"; version="1.8.0"; sha256="1miqc8apjm8pvb9p4man688qnxpg04fqgidy7g9vr654hfc90gja"; depends=[]; };
+  mvoutData = derive2 { name="mvoutData"; version="1.14.0"; sha256="0lwzsv8pmyyadnky9m0c3xf5dvm2qs8igkvrfaglsgl1wmymw86a"; depends=[affy Biobase lumi]; };
+  pRolocdata = derive2 { name="pRolocdata"; version="1.16.0"; sha256="1pmz9vyvl3r8s6mfbd7k7vrz7qk1sv9136aykykvl139rsq7vwnz"; depends=[Biobase MSnbase]; };
+  parathyroidSE = derive2 { name="parathyroidSE"; version="1.16.0"; sha256="1jd3fwri705b4i1wwnzx41idc2lvwai6mr7k78666wl6a8275hcn"; depends=[SummarizedExperiment]; };
+  pasilla = derive2 { name="pasilla"; version="1.6.0"; sha256="0h6ll2csja5vnmylazb1qklz7ybk5hn0nxgkvxhhsmyqk9w7gk6m"; depends=[]; };
+  pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.16.0"; sha256="1rchf41zh44kzvim8iwvyfvgcfwv587p5p1yipgwf65hyc9sd0fv"; depends=[]; };
+  pathprintGEOData = derive2 { name="pathprintGEOData"; version="1.4.0"; sha256="143an0hs22dbglmdc408mfch53zcskbf3a4jfgiajz3dml81flzl"; depends=[]; };
+  pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.14.0"; sha256="137lj4j0hlz3mkwyf334xr3bpm9j2jg1cd2sw9203kx6hvk92i2z"; depends=[]; };
+  pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.14.0"; sha256="0kb62bm1a8m88g59v6553qg69rmv0gh0wy4yfkqvn2sgz51zk4r4"; depends=[]; };
+  pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.14.0"; sha256="0b3cak7nzd6qxr7gnly4246gjdhxyp8h0w5dr1xsgwd9zy1k0psw"; depends=[]; };
+  pcxnData = derive2 { name="pcxnData"; version="1.0.0"; sha256="0bkzqac0b2x1f398bflv077dp6nb3ysdf75jcwxpj4nwyhcb7n4f"; depends=[]; };
+  pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.16.0"; sha256="1ilwm4nx232dll01xqqvagq3qi6qa060v84y20ihxhfwdm46z0ci"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; };
+  pepDat = derive2 { name="pepDat"; version="0.112.0"; sha256="15v4yk9cpnz2k16ka4iyc61ji5ck9mlkabgzxalwfnz77ri23mk0"; depends=[GenomicRanges]; };
+  plasFIA = derive2 { name="plasFIA"; version="1.6.0"; sha256="0p3pbjm5ww24ax7h72m38l0rcm01w5a4h8j5rsgynczvfv9jlwjq"; depends=[proFIA]; };
+  ppiData = derive2 { name="ppiData"; version="0.16.0"; sha256="00wjgaihavx99qbcrx1sai2v35pm7kmkvybwdn7ndngvkzqixph5"; depends=[AnnotationDbi graph]; };
+  prebsdata = derive2 { name="prebsdata"; version="1.14.0"; sha256="0rq90wrprj8xy60597dwq8ialjfyfcs8c2fgbskcm7ypba92brmp"; depends=[]; };
+  prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.6.0"; sha256="0f08mbwsac1nxvf4mwyjnwxd662rdibnzgrn8a0hcl1jmlsrkmg0"; depends=[Biobase]; };
+  prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.6.0"; sha256="0rk822avnfg3lydq9z995ki9zh7ch8ycg6nslxp8w5c3z4p447mk"; depends=[Biobase]; };
+  prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.6.0"; sha256="03min0za1paivvi45fl6nyksvhahpxlnqnkisj9312pb1x1gfm54"; depends=[Biobase]; };
+  prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.6.0"; sha256="01c519rp5jdphc9kqsdqcxsxkg00nhv3s82xlms6s0qdpibscx8m"; depends=[Biobase]; };
+  prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.6.0"; sha256="10qqsijkjwsw64am50vcjykxghgw51psq608yp9qj85l5d33kkmp"; depends=[Biobase]; };
+  pumadata = derive2 { name="pumadata"; version="2.14.0"; sha256="0fsg1qcvfm2s7mpmwqih4pkgwphb4d1k8fah6gwvgc13q519ir2x"; depends=[affy Biobase oligo puma]; };
+  rRDPData = derive2 { name="rRDPData"; version="0.112.0"; sha256="0305x1kkm5wbxcnw7kazrlhdjp91xrbxcvyypn6n0ga09ypk071l"; depends=[rRDP]; };
+  rcellminerData = derive2 { name="rcellminerData"; version="2.0.0"; sha256="03j715sdprmdn1kazcyfy33nymz8kj52hxbv85a8bj3r2r1w6fzm"; depends=[Biobase]; };
+  restfulSEData = derive2 { name="restfulSEData"; version="1.0.0"; sha256="1v7fvyabb8zjhzwpi1yamp0ch8zm32s820bfr366ir69dib66sa4"; depends=[ExperimentHub SummarizedExperiment]; };
+  rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.16.0"; sha256="06mfgsvzn2s30skrrqm4m76kb1bzp6aa52jfkz94gfam8ps1h1vf"; depends=[]; };
+  sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.2.0"; sha256="0bb4pjiljjixxvz9p59knwxmwr7g0334rs58r0j9w84v1g5prgwv"; depends=[SummarizedExperiment]; };
+  scRNAseq = derive2 { name="scRNAseq"; version="1.4.0"; sha256="0jlcgna92mrcjz95r788falyhdpbfa75z2j7dy4jxdr0kd0gjrb6"; depends=[SummarizedExperiment]; };
+  seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.10.0"; sha256="01h6xhap2gbwgv3jwrzzciwd697x1vy6gaxmn0jlhvryy9qw9q05"; depends=[]; };
+  seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.14.0"; sha256="1g1lgzsrnf0j5yv2hlgilij1mzbz86pl3p3vd8pbkd61pdf4gxz2"; depends=[]; };
+  seqc = derive2 { name="seqc"; version="1.12.0"; sha256="0dzfxx75lnrqh2ag9x7351c8xkkfrbvz8fqnigfslgrx01ydxs9y"; depends=[]; };
+  serumStimulation = derive2 { name="serumStimulation"; version="1.14.0"; sha256="10pg5vp1np7n0n7maiizgx2kskm02ikfqvz6pxlz9mglhi1vss1l"; depends=[]; };
+  seventyGeneData = derive2 { name="seventyGeneData"; version="1.14.0"; sha256="0643h4wlqmpsygawlh9mh1f889wp79adhlx9s1cqm2b5gggpsrli"; depends=[]; };
+  shinyMethylData = derive2 { name="shinyMethylData"; version="0.112.0"; sha256="03y637yxglvy3jxydslwl9ivdc5r8ndph7anbzrmprzp6i481gj4"; depends=[]; };
+  simpIntLists = derive2 { name="simpIntLists"; version="1.14.0"; sha256="1sdmcbx3yvgwhw8kilx3xa6ip0klyvia00plv1pyfwsl6ldnymvl"; depends=[]; };
+  stemHypoxia = derive2 { name="stemHypoxia"; version="1.14.0"; sha256="0l6nfx1b97grxgq618zvb9ymysrl52r1ahr5ivav3znsnych0gl8"; depends=[]; };
+  stjudem = derive2 { name="stjudem"; version="1.18.0"; sha256="1bxc1qzs6jcdfh87f6mzn9d1ih790i461267czzhsm9niha4q604"; depends=[]; };
+  synapterdata = derive2 { name="synapterdata"; version="1.16.0"; sha256="1r1ldji1wnfsk772c00cwmx13xms90v9diqrqjilxbam9p30wr98"; depends=[synapter]; };
+  systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.6.0"; sha256="1j2kwczhqz26rf0ra34am32lbwp7rk13in1saf0kxd88m8qljksa"; depends=[BiocGenerics]; };
+  tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.16.0"; sha256="0a71k64y6yw4pxnbay478d27pfshnw96rslphvpkqaf48903b2fy"; depends=[]; };
+  tinesath1probe = derive2 { name="tinesath1probe"; version="1.16.0"; sha256="088hrs6b65rxvw4d153fbk83w9p88mv5xfkwj4xziygibqy7lmpi"; depends=[AnnotationDbi]; };
+  tofsimsData = derive2 { name="tofsimsData"; version="1.6.0"; sha256="030x882c38apa3n4vs9qj5a83sa8m183ifym60zqyms432k4xc70"; depends=[]; };
+  topdownrdata = derive2 { name="topdownrdata"; version="1.0.0"; sha256="157vv89cidpcnliksfy4inds52j176724xydk0smykc6ny9wmas7"; depends=[topdownr]; };
+  tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.16.0"; sha256="17v27ir0a38y1h73nr8nib18bj8s2l6rbz5y15ly7pp2wkp5w0cm"; depends=[Biobase]; };
+  tximportData = derive2 { name="tximportData"; version="1.6.0"; sha256="0l86z9nryhqzdqh6vn5krlkdhanhybr86z75l7lwg07k34nm8qcb"; depends=[]; };
+  vulcandata = derive2 { name="vulcandata"; version="1.0.0"; sha256="0nka5sw9gp7nv09zdi4cq10k7k400padadq80xzxfzss91nwz23l"; depends=[]; };
+  waveTilingData = derive2 { name="waveTilingData"; version="1.14.0"; sha256="0ndskrk78c8596gymcffdr5mbxi1x5046w8m83baa3vrd8csn282"; depends=[]; };
+  yeastCC = derive2 { name="yeastCC"; version="1.18.0"; sha256="1qm0knin24bwpjsi4g9s6vdfydrjqvv19a2kjx1k51l2j46g0rni"; depends=[Biobase]; };
+  yeastExpData = derive2 { name="yeastExpData"; version="0.24.0"; sha256="19v901c67kp8kfb6i2hv8mczf9kcy0pvr8y4w5brjp4lj6djcvid"; depends=[graph]; };
+  yeastGSData = derive2 { name="yeastGSData"; version="0.16.0"; sha256="19c4293lzrw8d8az1bzfw5ipxyrzgh8kxi3km82nqzfcnxlq0b89"; depends=[]; };
+  yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.14.0"; sha256="0f7amg423236scpzxqi2jy2w4ppa0zqwn9m4mqjksk2klig9nx3g"; depends=[]; };
+  yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.16.0"; sha256="05pi5s91wivlc1nfnsnzgx8kdibi7a3k5dgqh0a0x98wiqynin41"; depends=[]; };
+  yri1kgv = derive2 { name="yri1kgv"; version="0.20.0"; sha256="0hl53rl5yhmd3yxdjd2q0wj8mlcgdckiln0dym83b1249lnhwp9z"; depends=[Biobase GGBase]; };
+  yriMulti = derive2 { name="yriMulti"; version="0.8.0"; sha256="0b48phy3jndplmi9yxbd0i5bn7jqf6fpb7qlqxvzibm1q50l9yx3"; depends=[dsQTL GenomeInfoDb GenomicFiles GenomicRanges geuvPack gQTLBase Homo_sapiens MultiAssayExperiment SummarizedExperiment VariantAnnotation]; };
+  zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="0.112.0"; sha256="1zpn3d4xmzq18hji93g5br1snw0d9wmvpjmbxnmiaqwr8mrx5zbn"; depends=[]; };
 }
diff --git a/pkgs/development/r-modules/bioc-packages.nix b/pkgs/development/r-modules/bioc-packages.nix
index 070ff5e96ade..06f1d81d8a98 100644
--- a/pkgs/development/r-modules/bioc-packages.nix
+++ b/pkgs/development/r-modules/bioc-packages.nix
@@ -4,1300 +4,1483 @@
 # Rscript generate-r-packages.R bioc >new && mv new bioc-packages.nix
 
 { self, derive }:
-let derive2 = derive { rVersion = "3.4"; };
+let derive2 = derive { biocVersion = "3.6"; };
 in with self; {
-  ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.4.0"; sha256="1skhxyvyfgld2abiw8cl8wkqrq80jm2pm4p6l297v25cbsjmk3lz"; depends=[ABAData gplots Rcpp]; };
-  ABSSeq = derive2 { name="ABSSeq"; version="1.20.4"; sha256="032j430z787j1jrm0c40nn6m33vbjyngiz9ln1jx2z222ybcxrd6"; depends=[limma locfit]; };
-  ABarray = derive2 { name="ABarray"; version="1.42.0"; sha256="17vmy7419jdbrkzjll2ck2qvw3wdbba2cdazvji5zrflg9938hmj"; depends=[Biobase multtest]; };
-  ACME = derive2 { name="ACME"; version="2.30.0"; sha256="1hhqdnv4dkck47yvp17y3b741d63dxnlhbmkylz5bdab2swffz4m"; depends=[Biobase BiocGenerics]; };
-  ADaCGH2 = derive2 { name="ADaCGH2"; version="2.14.0"; sha256="0lvj93gy2x7c6fh2lv8mr17aglk97cmp8s7nwrhysxizbhpzf6mn"; depends=[aCGH bit cluster DNAcopy ff ffbase GLAD snapCGH tilingArray waveslim]; };
-  AGDEX = derive2 { name="AGDEX"; version="1.22.0"; sha256="06zcc8zc5dz310wi1rp75f6015lf97dwaqgqrbxim2akrfrnhyzb"; depends=[Biobase GSEABase]; };
-  AIMS = derive2 { name="AIMS"; version="1.6.0"; sha256="1z62cw3f803vl4mymaxaa0vkvrlsmc79idqcq92qw9iznpdl2jam"; depends=[Biobase e1071]; };
-  ALDEx2 = derive2 { name="ALDEx2"; version="1.6.0"; sha256="1iiympsbj234nh7pdpgw6wiadj356i925j6in5d14jcqkq12jwpv"; depends=[BiocParallel GenomicRanges IRanges S4Vectors SummarizedExperiment]; };
-  AMOUNTAIN = derive2 { name="AMOUNTAIN"; version="1.0.0"; sha256="0fh7086cdhpp05nwwj6bxwrzi9m6wkzirlb905c3g46afd9wxjrp"; depends=[]; };
-  ARRmNormalization = derive2 { name="ARRmNormalization"; version="1.14.0"; sha256="1ikfh4sqzclhva92wz9xhlf835sw9isa6jflnsjwqilg5kivy9bp"; depends=[ARRmData]; };
-  ASAFE = derive2 { name="ASAFE"; version="1.0.0"; sha256="0jcjd5gh8j9iwq1b97jw614cz69z2s2fxv1prqkx3alibsf8jr2x"; depends=[]; };
-  ASEB = derive2 { name="ASEB"; version="1.18.0"; sha256="09kppm2lhhhd0kfy274xx6p387fxh7rfa3g4ajncnq6bspz8hvia"; depends=[]; };
-  ASGSCA = derive2 { name="ASGSCA"; version="1.8.0"; sha256="0w8lwaaj51fh3ibrdcba74x1nfar4m30dz2rii63lk0ah2xb9amy"; depends=[MASS Matrix]; };
-  ASSET = derive2 { name="ASSET"; version="1.12.0"; sha256="0vpyi5vpyys597ma8ig18hm1x2f86fwzd35wq5h68glnm3jm3vds"; depends=[MASS msm mvtnorm rmeta tmvnsim]; };
-  ASSIGN = derive2 { name="ASSIGN"; version="1.10.0"; sha256="0ks2k8r650j95wd0s7bvxl4d8bgx6dzzb4bpqc68p6bmnx80vkqv"; depends=[gplots msm Rlab]; };
-  ASpli = derive2 { name="ASpli"; version="1.0.0"; sha256="0cyq81f2ll9ygvq71p3mlmnvs8pm1582pldz1amlwwwdng7c4v36"; depends=[AnnotationDbi BiocGenerics DESeq2 DEXSeq edgeR GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges S4Vectors]; };
-  AffyCompatible = derive2 { name="AffyCompatible"; version="1.34.0"; sha256="1275r14pgj33zq275yp9xqvmxl2nqi2cgylbyjy8i9xvbg4f4sfg"; depends=[Biostrings RCurl XML]; };
-  AffyExpress = derive2 { name="AffyExpress"; version="1.40.0"; sha256="0ahj4fm2wdcza4w9m12vvfmzgl2f71xkhwf8mrwm69fp9n1s27lx"; depends=[affy limma]; };
-  AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.20.0"; sha256="03rsp23nzvzyswxziwf07x0q5w2f7lhsjpz1biz2pzv64g6xnkwi"; depends=[affy]; };
-  AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.24.0"; sha256="0jd78lh02kwxqll5qwnfkwrgfrm5scdc6p703r0vd8gl3cz8wdws"; depends=[affy affycoretools Biobase limma preprocessCore]; };
-  AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.12.0"; sha256="0a4bmv7fpd134vdixlwxszlz7lx8xab8122m6p92q6gpla5fb6hk"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; };
-  AnalysisPageServer = derive2 { name="AnalysisPageServer"; version="1.8.1"; sha256="16x28f7lc5rn73m8l5z3jigkld5yf12pf5hv0mrq9l6fln1i002x"; depends=[Biobase graph log4r rjson]; };
-  Anaquin = derive2 { name="Anaquin"; version="1.0.0"; sha256="1fcbxzl4jwcbkgn4v5x4g901fpvlij5hv5n0jfvhxi8wdwqi0xq6"; depends=[ggplot2 knitr locfit plyr qvalue ROCR]; };
-  AneuFinder = derive2 { name="AneuFinder"; version="1.2.1"; sha256="1yicsbfj72qbzz03pn1wndmkmsa9i97a78cblhl3vhqgkfff8dx5"; depends=[AneuFinderData bamsignals BiocGenerics Biostrings cowplot DNAcopy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 ggrepel IRanges mclust ReorderCluster reshape2 Rsamtools S4Vectors]; };
-  AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.36.2"; sha256="0574lmyisn3nv9aicz9x3iivx990da4q2j4i0f1jz0mpj9v3vc2w"; depends=[Biobase BiocGenerics DBI IRanges RSQLite S4Vectors]; };
-  AnnotationForge = derive2 { name="AnnotationForge"; version="1.16.1"; sha256="0l1g9hy88sh5g567svyfd8pnjvkyklkn6a3gjn8zalvh62qqjjq1"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; };
-  AnnotationFuncs = derive2 { name="AnnotationFuncs"; version="1.24.0"; sha256="1x8rwldmwiri0jk1ypc47bgwdq8nzbbxji9pphgs69g09dijsd0f"; depends=[AnnotationDbi DBI]; };
-  AnnotationHub = derive2 { name="AnnotationHub"; version="2.6.5"; sha256="0ff2by5bw5ywxwasiq7z5zc5w7wwwjsvwkj26mjv35zvy7d33kd2"; depends=[AnnotationDbi BiocGenerics BiocInstaller httr interactiveDisplayBase RSQLite S4Vectors yaml]; };
-  AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.4.1"; sha256="16v6pqdicjsc9vr4mpjrczffw2dzfkzqp302n0c7m8q2hyw869yl"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocInstaller Biostrings curl DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges GEOquery httr IRanges jsonlite OrganismDbi rBiopaxParser Rsamtools RSQLite rtracklayer S4Vectors XML xml2]; };
-  ArrayExpress = derive2 { name="ArrayExpress"; version="1.34.0"; sha256="00142sbwbxgwqqhizhjkv5c6jc3575r4s3wwmq4jl6xhlb6nmab6"; depends=[Biobase limma oligo XML]; };
-  ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.24.0"; sha256="13y4z76sf05ix9ca0pw058q49y5q1z9yisngwjwkmigcz2bwp6z2"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops DESeq edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; };
-  ArrayTV = derive2 { name="ArrayTV"; version="1.12.0"; sha256="10dxj9p02lbh80s17yg3blkx1jha8a962949g733k4p6l25av4jx"; depends=[DNAcopy foreach oligoClasses S4Vectors]; };
-  ArrayTools = derive2 { name="ArrayTools"; version="1.34.0"; sha256="02sbknh03k84ylbmmbby8f96dbnwyi2i7hl1p8akf7idg3skinma"; depends=[affy Biobase limma xtable]; };
-  AtlasRDF = derive2 { name="AtlasRDF"; version="1.10.0"; sha256="1ar3ggivwc5nx22kyqapv1sb0ra91nq78c989prx5bli3cxfrkxg"; depends=[hash SPARQL]; };
-  BAC = derive2 { name="BAC"; version="1.34.0"; sha256="0j7l177nc5c1imib2y1lnnza2b5824rjb10plbpa5knn15kql1l9"; depends=[]; };
-  BADER = derive2 { name="BADER"; version="1.12.0"; sha256="0q62cyjqqb5v5cnbn9nm3mlfifz140wk6r27d75dshji4arwc60y"; depends=[]; };
-  BAGS = derive2 { name="BAGS"; version="2.14.0"; sha256="0ajjbz3g09qwdl57ab2yhrdvmbw1d0hfcncglpsbf98pb6kda1br"; depends=[Biobase breastCancerVDX]; };
-  BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.4.0"; sha256="1q6msd8l3v10swx4cbc71ggihnw9p3pj87v2n5mgdzpc1nngygib"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; };
-  BCRANK = derive2 { name="BCRANK"; version="1.36.0"; sha256="0jx6mp6ca4kwpyv341n485hlyzgqayynfrx6vl18dp6f0zkarkym"; depends=[Biostrings]; };
-  BEAT = derive2 { name="BEAT"; version="1.12.0"; sha256="03wcm4ga5vsf7iqih7p0sw39ipjaygvhx2x153fnqfhg34a4k67z"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; };
-  BEclear = derive2 { name="BEclear"; version="1.6.0"; sha256="1z04ylm5821s7rgrv0bgx5mmy4f09d3a5n4r0mz82lnin7i8swab"; depends=[Matrix snowfall]; };
-  BGmix = derive2 { name="BGmix"; version="1.34.0"; sha256="1zkylanfd9m35hswvyykjqz1rb84fhn51q18g32ilpk4yd78aqj2"; depends=[KernSmooth]; };
-  BHC = derive2 { name="BHC"; version="1.26.0"; sha256="0xawsqh3drpw14c9a3sacd0rmk93p6gn2yfmqlf91a41sbpj0hpc"; depends=[]; };
-  BPRMeth = derive2 { name="BPRMeth"; version="1.0.0"; sha256="0rn4q12bjy5k6g9wkghrxivfzw32qwc6sh4b2b6gaxqsq4rqbnmj"; depends=[assertthat data_table doParallel e1071 earth foreach GenomicRanges IRanges MASS randomForest S4Vectors]; };
-  BRAIN = derive2 { name="BRAIN"; version="1.20.0"; sha256="1nj78v1z98mj1n6kyw4fgradn4yqbyd58db15xwlk8d23gs902wq"; depends=[Biostrings lattice PolynomF]; };
-  BSgenome = derive2 { name="BSgenome"; version="1.42.0"; sha256="0hxwc02h5mzhkrk60d1jmlsfjf0ai9jxdc0128kj1sg4r2k1q94y"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors XVector]; };
-  BUS = derive2 { name="BUS"; version="1.30.0"; sha256="144x8zl983vis1k0nba5j2i6pywrczmq2cqdg3bd1w1z9n69643k"; depends=[infotheo minet]; };
-  BaalChIP = derive2 { name="BaalChIP"; version="1.0.0"; sha256="0dy3096078gfy9awyagqnbv63ib8bbgh36jf9zvfhilrz9d31xl5"; depends=[coda doBy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools scales]; };
-  BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.2.0"; sha256="09q1bqgz6amraslcdihjz81q7gndn158vp6wpzb1ky9fdd6akd0a"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; };
-  BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.18.0"; sha256="03jpwdngyjs18pzkp17fdyy5vq6h0ccqw942a7nd60dsf27mw3pf"; depends=[RCurl RJSONIO]; };
-  Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.10.0"; sha256="0cgb4qn3gg7cgp81cblg9qkim729bjvygi7wlxsnsriqfjljsb5s"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; };
-  BasicSTARRseq = derive2 { name="BasicSTARRseq"; version="1.2.0"; sha256="0z7z6gnsczdb4x9277i0fyf5306gkn94j1j2i5aw1j990hrnb619"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges S4Vectors]; };
-  BatchQC = derive2 { name="BatchQC"; version="1.2.1"; sha256="0gdxbn74zrbpgg0y9w0n8mbibh0f320ghgyw32ya1agc8maqkfzm"; depends=[corpcor d3heatmap ggvis gplots knitr limma matrixStats MCMCpack moments pander reshape2 rmarkdown shiny sva]; };
-  BayesKnockdown = derive2 { name="BayesKnockdown"; version="1.0.0"; sha256="07zmkihvakhqxc6v6hh95d3wkg32vrvag1fbx9qxfmqnnicsrnin"; depends=[Biobase]; };
-  BayesPeak = derive2 { name="BayesPeak"; version="1.26.0"; sha256="1hk31ic0r7zbvfz04h1ginkkhzbz85wdlsmym1aqbiz4x53j97wj"; depends=[IRanges]; };
-  BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.26.0"; sha256="0ms2wa4h81j4q6bwak217q8nkrkmj5zjm33i3gkifbzav2s1k5vf"; depends=[]; };
-  BgeeDB = derive2 { name="BgeeDB"; version="2.0.0"; sha256="11az0sqnjrpfw3pnf0aqgz4kqd8gd1976s9zfyl10gyrfj7h9n49"; depends=[Biobase data_table digest dplyr graph RCurl tidyr topGO]; };
-  BiGGR = derive2 { name="BiGGR"; version="1.10.0"; sha256="1h2ilx761cy3f4vd52kz4vyq74khln5jiwhllg3w4vs4kczvs32k"; depends=[hyperdraw hypergraph LIM limSolve rsbml stringr]; };
-  BiRewire = derive2 { name="BiRewire"; version="3.6.0"; sha256="138q86h188nnwb4f0q1xw07n0v44cgmfzh5j9xvbkcp522lj0n92"; depends=[igraph Matrix slam tsne]; };
-  BiSeq = derive2 { name="BiSeq"; version="1.14.0"; sha256="1bdgg8mb269hipp0n8bphdgrslzmc8ykcdx848vcgppgfb0dab7a"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; };
-  BicARE = derive2 { name="BicARE"; version="1.32.0"; sha256="0mkdb2ijr8lb1j08nzd3vwr63vjlpfs739fwk5ay586a99n4qi0z"; depends=[Biobase GSEABase multtest]; };
-  BioMVCClass = derive2 { name="BioMVCClass"; version="1.42.0"; sha256="1zd7s997dyhl85b99nzqy5a2ljdz7gh55l02y3qadgbfazfrfbfl"; depends=[Biobase graph MVCClass Rgraphviz]; };
-  BioNet = derive2 { name="BioNet"; version="1.34.0"; sha256="1vjnlr7gasklb9dshz580bc8z8rkd98093rf0049vqf4z7d65m3j"; depends=[AnnotationDbi Biobase graph igraph RBGL]; };
-  BioQC = derive2 { name="BioQC"; version="1.2.0"; sha256="0cjh945vjcgn8lxi3gd13m96vrp01pz96mjn0apcp7xbf2rcfmmx"; depends=[Biobase Rcpp]; };
-  BioSeqClass = derive2 { name="BioSeqClass"; version="1.32.0"; sha256="1m0arhpckd2g48mwfm56av4fkgs6mcmwygxyci0jfh9hl78mp155"; depends=[Biobase Biostrings class e1071 foreign ipred klaR nnet party randomForest rpart scatterplot3d tree]; };
-  Biobase = derive2 { name="Biobase"; version="2.34.0"; sha256="0js9j9wqls8f571ifl9ylllbb9a9hwf7b7drf2grwb1fl31ldazl"; depends=[BiocGenerics]; };
-  BiocCaseStudies = derive2 { name="BiocCaseStudies"; version="1.36.0"; sha256="1qgf7hii9zhw8awqs7j89k35y34w45xb9k4sa8csd76h3y7av3q0"; depends=[Biobase]; };
-  BiocCheck = derive2 { name="BiocCheck"; version="1.10.1"; sha256="197kpiycyl3qawm6801fxyxj81d2g57a00qxaqprapsf1d140l52"; depends=[BiocInstaller biocViews codetools graph httr optparse]; };
-  BiocGenerics = derive2 { name="BiocGenerics"; version="0.20.0"; sha256="06szdz7dfs1iyv5zdl4fjzad18nnf1zf3wvglc6c6yd9mrqlf7vk"; depends=[]; };
-  BiocInstaller = derive2 { name="BiocInstaller"; version="1.24.0"; sha256="0y1y5wmy6lzjqx3hdg15n91d417ccjj8dbvdkhmp99bs5aijwcpn"; depends=[]; };
-  BiocParallel = derive2 { name="BiocParallel"; version="1.8.2"; sha256="18zpa0vl375n9pvxsgbid1k96m17nqqgv1g1sfnlmm7kj34jxg6v"; depends=[futile_logger snow]; };
-  BiocStyle = derive2 { name="BiocStyle"; version="2.2.1"; sha256="0sl99xw940ixrm6v24lgaw3ljh56g59a6rdz7g160hx84z9f8n2n"; depends=[]; };
-  BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.0.0"; sha256="0asia6f2ff80g8a2w0fckkqhcydkj4ry67c7wlxsz0xzllp14gxl"; depends=[httr knitr rmarkdown stringr]; };
-  Biostrings = derive2 { name="Biostrings"; version="2.42.1"; sha256="0vqgd9i6y3wj4zviqwgvwgd4qj6033fg01rmx1cw9bw5i8ans42d"; depends=[BiocGenerics IRanges S4Vectors XVector]; };
-  BitSeq = derive2 { name="BitSeq"; version="1.18.0"; sha256="0kv2kk1flm6vbs7s2d6kya1jg8hajrxdg5ndihrsybaas5fby8mb"; depends=[IRanges Rsamtools S4Vectors zlibbioc]; };
-  BrainStars = derive2 { name="BrainStars"; version="1.18.0"; sha256="0q0jx30baf2hnz4mplqj6jhl7mj5hncgb00cj1d6yijv9c9iiay7"; depends=[Biobase RCurl RJSONIO]; };
-  BridgeDbR = derive2 { name="BridgeDbR"; version="1.8.0"; sha256="049a5bdjxp30jc5zgswk0bsyfvri58g4zrbkw258kwgsmk44l6f4"; depends=[RCurl rJava]; };
-  BrowserViz = derive2 { name="BrowserViz"; version="1.6.0"; sha256="06a7sg26b0lwla9vzq9vnggvbhnnw5xh07r7yr258d5030nabpy3"; depends=[BiocGenerics httpuv jsonlite]; };
-  BrowserVizDemo = derive2 { name="BrowserVizDemo"; version="1.6.0"; sha256="0v1l13i6xf8605xrmgfj0pi0r4w15jpzvz4inhpnm66rn0qv2r5q"; depends=[BiocGenerics BrowserViz httpuv jsonlite Rcpp]; };
-  BubbleTree = derive2 { name="BubbleTree"; version="2.4.0"; sha256="16sy8yfbjr1shbd63g9354mzxsisqp4d9nfi6hxhj5c2r35x6bga"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr e1071 GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr rainbow RColorBrewer WriteXLS]; };
-  BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.38.0"; sha256="04l2dqnf2akq4fhy63sywnmrcddz0r7da3gbd2zgp9fyn6m5ayv0"; depends=[]; };
-  BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.38.0"; sha256="0m7pwiyrk482g73aknmhpp09vc4yb5s3jb8bp3y9d494hdy7mijl"; depends=[BufferedMatrix]; };
-  CAFE = derive2 { name="CAFE"; version="1.10.0"; sha256="0gw5c94fr1kzckai6bgyc5dkgizqir3k8zcc6mdpl5d07hwahsip"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; };
-  CAGEr = derive2 { name="CAGEr"; version="1.16.0"; sha256="1bbbj2bqc2xd5akmgi30w0h0rfn1n5sv626dz916alhjzhiqx52m"; depends=[beanplot BSgenome data_table GenomicRanges IRanges Rsamtools rtracklayer som VGAM]; };
-  CALIB = derive2 { name="CALIB"; version="1.40.0"; sha256="0r0dz6vg3sx4bxajh6c8gc12wgnaahnz3yah82jsws1wzplqhkvi"; depends=[limma]; };
-  CAMERA = derive2 { name="CAMERA"; version="1.30.0"; sha256="074ln7d0f5gqsk9cxsckmklbx8grzh9kqjlf8zcz6j7ypnzkhy57"; depends=[Biobase graph Hmisc igraph RBGL xcms]; };
-  CAnD = derive2 { name="CAnD"; version="1.6.0"; sha256="14nq061i69hk8yrkiq35lk7nk58klpl7lmkjzfdd8789h87218b2"; depends=[ggplot2 reshape]; };
-  CCPROMISE = derive2 { name="CCPROMISE"; version="1.0.0"; sha256="0cx58i42dypx6sqyrmbf4gw2c2213cgjbijkq2fxf9ah8fm4ss3p"; depends=[Biobase CCP GSEABase PROMISE]; };
-  CFAssay = derive2 { name="CFAssay"; version="1.8.0"; sha256="0p91q4z8kip0pqn45kspczhffv9f6mwn1p07q2bwl5fdcbs2xp5p"; depends=[]; };
-  CGEN = derive2 { name="CGEN"; version="3.10.0"; sha256="189bhjzgcag4n216h0jnq994y439nd052yalx7ll5q7nazhw5j8w"; depends=[mvtnorm survival]; };
-  CGHbase = derive2 { name="CGHbase"; version="1.34.0"; sha256="1pb1paby9n9map71jk971qfpni2m23hcwrssqqjb7byjc9flnmf5"; depends=[Biobase marray]; };
-  CGHcall = derive2 { name="CGHcall"; version="2.36.0"; sha256="0wnyslj7yn0yc57q60w2y644lmvvvih6rzm55rrad34lz2h39bsz"; depends=[Biobase CGHbase DNAcopy impute snowfall]; };
-  CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.28.0"; sha256="1bv8vivl9b0c1dp7ka9dh3gvk1z4zpcirifh7yq0p9g9yr22k0vb"; depends=[Biobase CGHbase CGHcall]; };
-  CGHregions = derive2 { name="CGHregions"; version="1.32.0"; sha256="1cc2vz6k5lasvzj2dh8xm26j7zvvwwx8791pqhz6q2fisxq5vz1c"; depends=[Biobase CGHbase]; };
-  CHRONOS = derive2 { name="CHRONOS"; version="1.2.1"; sha256="0hzj01dw4xwivy0ikyh55i2zkf61g03m6rm6xfdhc7a49y6fzxpr"; depends=[biomaRt circlize doParallel foreach graph openxlsx RBGL RCurl XML]; };
-  CINdex = derive2 { name="CINdex"; version="1.2.0"; sha256="096qiz86rxfhcrjs0pf3mp5zqgi3j7i4agbw53ym5kwzg486y2r2"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; };
-  CMA = derive2 { name="CMA"; version="1.32.0"; sha256="0706k4xjakyid6mkca6z6r24kbsnkvw7qzzadqkm45sy11z0w5l8"; depends=[Biobase]; };
-  CNAnorm = derive2 { name="CNAnorm"; version="1.20.0"; sha256="0dja320m9yiaj0kp9gmygpbqffnjdpi476wwcs2gwd6yixsldl6b"; depends=[DNAcopy]; };
-  CNEr = derive2 { name="CNEr"; version="1.10.2"; sha256="12z2iza0mgw9yrpnlv7447mcsxn8h183712q66f1j4a779mhn5ii"; depends=[annotate BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 GO_db IRanges KEGGREST poweRlaw R_utils readr reshape2 RSQLite rtracklayer S4Vectors XVector]; };
-  CNORdt = derive2 { name="CNORdt"; version="1.16.0"; sha256="086ynj0nb6799qxgj7zys9gzxf4lvhacsqxr2qzl2hw4y13gxxkp"; depends=[abind CellNOptR]; };
-  CNORfeeder = derive2 { name="CNORfeeder"; version="1.14.0"; sha256="19x8xxra4n5ys8wjqwj49qs3lg5jq9y00c36avr7cckxi9kyqqhc"; depends=[CellNOptR graph]; };
-  CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.16.0"; sha256="03k246x3yi0c3bw8h0642767p6zbgx8d0ahvnv29lcrb7wp9qsi3"; depends=[CellNOptR nloptr]; };
-  CNORode = derive2 { name="CNORode"; version="1.16.0"; sha256="1zsnig3r8yqa06nfxbd8czxjk72h5z7h0vd85cqkb181bwagl0r3"; depends=[CellNOptR genalg]; };
-  CNPBayes = derive2 { name="CNPBayes"; version="1.4.0"; sha256="1ly0mh6k7x443i25g0j716aflc5q2rld0fqnyr86k1x06rh0ky8q"; depends=[BiocGenerics coda combinat GenomeInfoDb GenomicRanges gtools IRanges matrixStats RColorBrewer Rcpp S4Vectors SummarizedExperiment]; };
-  CNTools = derive2 { name="CNTools"; version="1.30.0"; sha256="0wcny74g377741as9dw87n4vf6yi8yvxhxbf87x0y4zkf88aimcz"; depends=[genefilter]; };
-  CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.4.0"; sha256="00xgwf62cs9l6pnvbp33b442q1mgaibac5fw4n2qsypdfb2p1xn3"; depends=[exomeCopy foreach GenomicRanges ggplot2 IRanges NOISeq openxlsx plyr Rsamtools S4Vectors]; };
-  CNVrd2 = derive2 { name="CNVrd2"; version="1.12.0"; sha256="1msjvq3200y637ybh2yb5g1c2z0aqk1bwjvrndrg36vlg7342b6y"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; };
-  CNVtools = derive2 { name="CNVtools"; version="1.68.0"; sha256="1lx2jhwfwya2hm8v9dkqkjhfbfp008k2k75r63wpph8yfxhyvvmz"; depends=[survival]; };
-  CODEX = derive2 { name="CODEX"; version="1.6.0"; sha256="077cbv8n6mr8ksapxj2b837ms68kyzgjlk499c69q3dji456bgfw"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; };
-  COHCAP = derive2 { name="COHCAP"; version="1.16.0"; sha256="14smbyviii5ghac3rhkrz87vhx6nxgv3n54k3rrzsdbrw8n0i773"; depends=[COHCAPanno gplots RColorBrewer WriteXLS]; };
-  COMPASS = derive2 { name="COMPASS"; version="1.12.0"; sha256="1cmqqcsv32ixdmm9qybvafjca6lqzc652hp4jn9vy62ffb81r8i8"; depends=[abind clue data_table knitr pdist plyr RColorBrewer Rcpp scales]; };
-  CONFESS = derive2 { name="CONFESS"; version="1.2.2"; sha256="1zw3sl5vzn6j8qppz39s2l11f9n2p5yzr4b17qgar6p41f83xffa"; depends=[changepoint cluster contrast EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; };
-  CORREP = derive2 { name="CORREP"; version="1.40.0"; sha256="1wd8qq11xdyis0acnzlml10m0z8fazzhmvxxqa21h2wpq0yz9m19"; depends=[e1071]; };
-  COSNet = derive2 { name="COSNet"; version="1.8.0"; sha256="07s72x0dbsnq340v1akl4jp8m63nnxck2nvivz12cvbq8hbhz6hf"; depends=[]; };
-  CRISPRseek = derive2 { name="CRISPRseek"; version="1.14.1"; sha256="0l3blmszil8zr03wg9pwl59lkyxbn1pa3pz967nlbwffcv2lqfa0"; depends=[BiocGenerics BiocParallel Biostrings BSgenome data_table hash IRanges S4Vectors seqinr]; };
-  CRImage = derive2 { name="CRImage"; version="1.22.0"; sha256="0km82x446b1r9b27z1cx65nd9lm8ppxkarzqwqs426hj59wpzxhf"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; };
-  CSAR = derive2 { name="CSAR"; version="1.26.0"; sha256="15w6mmwd5pqb144x3dyhi6x2ni00n0ak94lfrw317rajq733zr0p"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
-  CSSP = derive2 { name="CSSP"; version="1.12.0"; sha256="03gpl3w7iw79gcni4xchvbkrsp7v6i8zy6aqws54za4wimwqvsnf"; depends=[]; };
-  CVE = derive2 { name="CVE"; version="1.0.0"; sha256="0xmy5mdw43db9d8pd3k6d73005hba72df24fsmgp9dv5sy9rg6p2"; depends=[ape ConsensusClusterPlus ggplot2 gplots jsonlite plyr RColorBrewer shiny WGCNA]; };
-  CancerInSilico = derive2 { name="CancerInSilico"; version="1.0.0"; sha256="17jmyrcgs698g74hxp9mif7g4s175qdrfy5h1zz72fwcssmblh74"; depends=[BH Rcpp testthat]; };
-  CancerMutationAnalysis = derive2 { name="CancerMutationAnalysis"; version="1.16.0"; sha256="1wzbrlw5zf0pmm5m41wqf73wlsidb11l7l9llrmidbg860j0jjs0"; depends=[AnnotationDbi limma qvalue]; };
-  CancerSubtypes = derive2 { name="CancerSubtypes"; version="1.0.0"; sha256="1vja80lj16icp6jblw62b24daj7izgk9wbhbwprlbgcjvkppxfik"; depends=[cluster ConsensusClusterPlus iCluster impute limma NMF sigclust SNFtool survival]; };
-  Cardinal = derive2 { name="Cardinal"; version="1.6.0"; sha256="1fwni0dwn1syz5j0961fpmnmifqb20hd23ysazfi3xvdq7pf1lw7"; depends=[Biobase BiocGenerics irlba lattice ProtGenerics signal sp]; };
-  Category = derive2 { name="Category"; version="2.40.0"; sha256="16ncwz7b4y48k0p3fvbrbmvf7nfz63li9ysgcl8kp9kl4hg7llng"; depends=[annotate AnnotationDbi Biobase BiocGenerics genefilter graph GSEABase Matrix RBGL RSQLite]; };
-  CausalR = derive2 { name="CausalR"; version="1.6.0"; sha256="0l0021qslqj0xvrkg1lpmfnwdvi03yc7y2k62iz83s7k77z0wj6c"; depends=[igraph]; };
-  CellMapper = derive2 { name="CellMapper"; version="1.0.0"; sha256="1ixii9ppg7jhwvazzzjy3dq01x35yc3k81j698988dfrdls0plcv"; depends=[S4Vectors]; };
-  CellNOptR = derive2 { name="CellNOptR"; version="1.20.0"; sha256="1awz7k09rx03f8dq5g9mmnlizpx6232vvc03ycah3r1wwzgfzlhd"; depends=[ggplot2 graph hash RBGL RCurl Rgraphviz XML]; };
-  CexoR = derive2 { name="CexoR"; version="1.12.0"; sha256="110c7p0y3l7b491bvr78n5z8f4gmfgfjndbd8pnhn0k7abb9bvs9"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; };
-  ChAMP = derive2 { name="ChAMP"; version="2.6.4"; sha256="1f8ngnzp6yq4x746vid72ind2bi7l1wdfnipyj2wn0gsh2jpxa7c"; depends=[bumphunter ChAMPdata dendextend DMRcate DNAcopy doParallel FEM GenomicRanges goseq Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICmanifest impute isva limma marray matrixStats minfi plotly plyr preprocessCore quadprog qvalue RColorBrewer RefFreeEWAS RPMM shiny shinythemes sva wateRmelon]; };
-  ChIPComp = derive2 { name="ChIPComp"; version="1.4.0"; sha256="0wr9qrw9mnjl28fw764vhjb2shif6fl3z0hbwkhrfiz1974rdw0v"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; };
-  ChIPQC = derive2 { name="ChIPQC"; version="1.10.3"; sha256="1nabghyndp4bky6msb4k6gcxpgysz7rir545d5afrfi4gbk1rpfi"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; };
-  ChIPXpress = derive2 { name="ChIPXpress"; version="1.16.0"; sha256="19lx482jhh4h97nic57lk198a0x1xc51cnx79l9h6r9r86ncxl0w"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; };
-  ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.8.9"; sha256="1wykx52xqnz9pcxgfzf5i0ckrw41jg0piwynx1v1ldjxajbdh904"; depends=[AnnotationDbi Biobase BiocGenerics BiocInstaller biomaRt Biostrings BSgenome DBI ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GO_db graph idr IRanges limma matrixStats multtest RBGL regioneR Rsamtools S4Vectors seqinr SummarizedExperiment VennDiagram]; };
-  ChIPseeker = derive2 { name="ChIPseeker"; version="1.10.3"; sha256="00bv8i44c33ak2v6wzzk7s963wdhzb3c03ch2v8bkmnnb99sk0za"; depends=[AnnotationDbi BiocGenerics boot DOSE dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gridBase gtools IRanges magrittr plotrix RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene UpSetR]; };
-  ChIPseqR = derive2 { name="ChIPseqR"; version="1.28.0"; sha256="0bv5anp4p220vh53khaqggwclp34k2402mfcj28wv9cfl7xhw4g3"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; };
-  ChIPsim = derive2 { name="ChIPsim"; version="1.28.0"; sha256="06f00mviqxgqqli6lkybryl81hvf1ica94sj1zjc9bzm1aiva2fv"; depends=[Biostrings IRanges ShortRead XVector]; };
-  ChemmineOB = derive2 { name="ChemmineOB"; version="1.12.0"; sha256="1f5wx3259v5whwy9h8jw7gs52n65gdby8q0lq1z9md0846i8cx6p"; depends=[BH BiocGenerics Rcpp zlibbioc]; };
-  ChemmineR = derive2 { name="ChemmineR"; version="2.26.1"; sha256="1i3cdszdb4k0cj3sl1p2fll7vxk47w2fldjzwb3b24qab0xczyih"; depends=[BH BiocGenerics DBI digest ggplot2 Rcpp RCurl rjson]; };
-  Chicago = derive2 { name="Chicago"; version="1.2.0"; sha256="1bxb35azi6sdlw0rl043h50cs20ysgmmydlscl5nn96ajk5ahs74"; depends=[data_table Delaporte Hmisc MASS matrixStats]; };
-  ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.28.0"; sha256="034cianqg08rkqi2gpw29q144hnnnjb8jrmw180lfsdqbms8hlq3"; depends=[annotate AnnotationDbi Biobase BiocGenerics GenomicRanges IRanges rtracklayer]; };
-  ClassifyR = derive2 { name="ClassifyR"; version="1.8.2"; sha256="0mn5hmlyhln7yngqvq8k6ir63jhf71b1h6s3322pppbypq25njsz"; depends=[Biobase BiocParallel locfit ROCR]; };
-  Clomial = derive2 { name="Clomial"; version="1.10.0"; sha256="0nabq2nng5hc1rpqhr8riav0gjckzhhfr6i35ff5dxb4md3bgsxm"; depends=[matrixStats permute]; };
-  Clonality = derive2 { name="Clonality"; version="1.22.0"; sha256="0qi62476ix6vm0zr7n3zvh6msl8w3lcnk8bn8c7qvynkn82ky4j4"; depends=[DNAcopy]; };
-  ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.2.3"; sha256="169mi6xr5jslwgs9vyx0g90n2vp3za6v0hih714bamkk4vsjpzrv"; depends=[pracma princurve RColorBrewer scatterplot3d]; };
-  CoCiteStats = derive2 { name="CoCiteStats"; version="1.46.0"; sha256="0jsgcgrr8nnw8mngxcvijri94k6aq2r8svzbrif22m1v7cpddhll"; depends=[AnnotationDbi org_Hs_eg_db]; };
-  CoGAPS = derive2 { name="CoGAPS"; version="2.8.0"; sha256="1mbnyim02l1k77r2lchz7k42x9hpj1yvcq4qspyf2rh9d9p03zg6"; depends=[BH gplots RColorBrewer Rcpp]; };
-  CoRegNet = derive2 { name="CoRegNet"; version="1.10.0"; sha256="1gh9nkgxm4b583rf33g4qziz989725l42nnfyrjasjcgwb996scz"; depends=[arules igraph shiny]; };
-  CompGO = derive2 { name="CompGO"; version="1.10.0"; sha256="1walrgh7bczfzms8syi2vcmjzq1xigxl2jld9v9i7v139h4yvp6d"; depends=[GenomicFeatures ggplot2 pathview pcaMethods RDAVIDWebService reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; };
-  ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="1.12.0"; sha256="0r5d75lj0fbskizpmhbv0w4wscpfjfq9k3vbadyfs8wadmp9xvdh"; depends=[circlize colorspace dendextend GetoptLong GlobalOptions RColorBrewer]; };
-  ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.38.0"; sha256="0lw8j9gvm227yjh0ya05j4x87a9p6s95cr7sraza0zh6qc70vgzb"; depends=[ALL Biobase cluster]; };
-  CopywriteR = derive2 { name="CopywriteR"; version="2.6.0"; sha256="1bwwnsyk7cpgwkagsnn5mv6fv233b0rkhjvbadrh70h8m4anawfj"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; };
-  CorMut = derive2 { name="CorMut"; version="1.16.0"; sha256="0c0wx7nldq0wsa5z6l398jnnpkxjkqj9yc490x15kyds9pyazm85"; depends=[igraph seqinr]; };
-  Cormotif = derive2 { name="Cormotif"; version="1.20.0"; sha256="0wh5wj3z5q2yk9jw5wmd2adpwhl0vck19flzdwns55bfndz7s5xd"; depends=[affy limma]; };
-  CountClust = derive2 { name="CountClust"; version="1.2.0"; sha256="14frvr84dxfp4ily2x40gr7phh8d39ljxnlkz0224cc7v2lnkjz7"; depends=[cowplot flexmix ggplot2 gtools limma maptpx picante plyr reshape2 slam]; };
-  CoverageView = derive2 { name="CoverageView"; version="1.10.0"; sha256="1sfhir56rra207z8pl8px40qrc5hca8kf4zmrl2pk9zr7ksbd1z5"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; };
-  CrispRVariants = derive2 { name="CrispRVariants"; version="1.2.0"; sha256="0dvzyz3rxwd5blfcaf05viy35w7n8681wzb2lr5zdc44nm92d3kz"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; };
-  CytoML = derive2 { name="CytoML"; version="1.0.1"; sha256="034ki5bi83m04c9l2m636vb5l1wj0nmvyphj1db7bhz8i0h8as7w"; depends=[base64enc Biobase data_table flowCore flowUtils flowWorkspace graph jsonlite ncdfFlow openCyto RBGL Rgraphviz XML]; };
-  DAPAR = derive2 { name="DAPAR"; version="1.6.0"; sha256="0v176my80p7p26azczw75yqi9zdfvxjf35hjr5hprhm795bppavx"; depends=[Cairo cp4p doParallel foreach ggplot2 gplots impute imputeLCMD knitr lattice limma Matrix MSnbase norm openxlsx pcaMethods png preprocessCore RColorBrewer reshape2 scales tmvtnorm vioplot]; };
-  DART = derive2 { name="DART"; version="1.22.0"; sha256="0ysi99wlhb6v98nfqd6vss0c14sh87p0v13099dll18ijifvfkqr"; depends=[igraph]; };
-  DBChIP = derive2 { name="DBChIP"; version="1.18.0"; sha256="00jwf6163dbrglbq1fba3380ad7wxd8swj2xcm650m41i2nf2rqz"; depends=[DESeq edgeR]; };
-  DChIPRep = derive2 { name="DChIPRep"; version="1.4.0"; sha256="0l31w5xs2g9bdyy191gpslp41m9k42pq5lzd86vpm1xw0792q9w0"; depends=[assertthat ChIPpeakAnno DESeq2 fdrtool GenomicRanges ggplot2 plyr purrr reshape2 S4Vectors smoothmest soGGi SummarizedExperiment tidyr]; };
-  DECIPHER = derive2 { name="DECIPHER"; version="2.2.0"; sha256="07i9dgw4hck0jgxsj80sc68wf1d7d7zqxy8vbpf1ynf3m1zwkynp"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; };
-  DEDS = derive2 { name="DEDS"; version="1.48.0"; sha256="18bb887dhifdkcp0bgg4dfcx3nlwxnrakh0r000i856m5fn79zd5"; depends=[]; };
-  DEFormats = derive2 { name="DEFormats"; version="1.2.0"; sha256="047cvxbzs0mg14y9005f40xjgj1pgik43jb3q5z1inipqgmj1sn4"; depends=[checkmate DESeq2 edgeR GenomicRanges SummarizedExperiment]; };
-  DEGraph = derive2 { name="DEGraph"; version="1.26.0"; sha256="1s7gjraaqvndr590wbnvjq4wik6bmbdijl6l0ribd5d7r5zic0gm"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; };
-  DEGreport = derive2 { name="DEGreport"; version="1.10.1"; sha256="0llhniqryz3fckgmkc89h89ipc7ambi323y2awwyqc080d7ph37p"; depends=[cluster coda dplyr edgeR ggplot2 gridExtra knitr logging Nozzle_R1 pheatmap quantreg reshape tidyr]; };
-  DEGseq = derive2 { name="DEGseq"; version="1.28.0"; sha256="0p9m0bky2fa320nw22bfa270zj91aywmyp0vs67x3x4aimhirz7g"; depends=[qvalue samr]; };
-  DESeq = derive2 { name="DESeq"; version="1.26.0"; sha256="18f0400pcmla88kc2prscw0skkf7bww0mnkrj6hhxyy79dhzdy86"; depends=[Biobase BiocGenerics genefilter geneplotter lattice locfit MASS RColorBrewer]; };
-  DESeq2 = derive2 { name="DESeq2"; version="1.14.1"; sha256="1walwkqryn1gnwz7zryr5764a0p6ia7ag4w6w9n8fskg8dkg0fqs"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 Hmisc IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; };
-  DEXSeq = derive2 { name="DEXSeq"; version="1.20.2"; sha256="1j3ll3417smxx1akbi3kk1r2p0m8jfrgfd35rhmr3q8b3lz3x9pw"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; };
-  DEsubs = derive2 { name="DEsubs"; version="1.0.2"; sha256="0v35x38sh6i69m7wjwzyyjhcx88wrrz3gr5w1r80cg5rvjl8bhch"; depends=[circlize DESeq DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL samr]; };
-  DFP = derive2 { name="DFP"; version="1.32.0"; sha256="08jjhzqr4yv2zwdgn43r3bvh2hw0fsamicyzdwcfkamvw9p5ipxf"; depends=[Biobase]; };
-  DMRcaller = derive2 { name="DMRcaller"; version="1.6.0"; sha256="196km32s5z881hsranycsmmqk1nxr3vdfhwdy9l1j179b64vz09w"; depends=[GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; };
-  DMRcate = derive2 { name="DMRcate"; version="1.10.10"; sha256="1snsq6j1na9z78mks43fhgz2iayizm4vd51kx4m8zikc198h3xw1"; depends=[DMRcatedata DSS GenomicRanges Gviz IRanges limma minfi missMethyl plyr S4Vectors]; };
-  DMRforPairs = derive2 { name="DMRforPairs"; version="1.10.0"; sha256="0flr8a8bzhwcs4hhrcb8ilzr1pzlgic4d5nm8gsqnrgjdjh05np7"; depends=[GenomicRanges Gviz R2HTML]; };
-  DNABarcodes = derive2 { name="DNABarcodes"; version="1.4.0"; sha256="13xc3abfm2yg7s1h0way99vcj3577p3j183jhqq4ii86c6y9c6k7"; depends=[BH Matrix Rcpp]; };
-  DNAcopy = derive2 { name="DNAcopy"; version="1.48.0"; sha256="1idyvfvy7xx8k9vk00y4k3819qmip8iqm809j3vpxabmsn7r9zyh"; depends=[]; };
-  DNAshapeR = derive2 { name="DNAshapeR"; version="1.2.0"; sha256="0zm1c989h34iqk0w9sgz7bdz3h0njns856yhc1q7n6vfqnhhygsz"; depends=[Biostrings fields GenomicRanges Rcpp]; };
-  DOQTL = derive2 { name="DOQTL"; version="1.10.0"; sha256="0fn444vc1w274079a3yn79rnv6i1nhqp9jwyg0qkih53bg49519x"; depends=[annotate annotationTools Biobase BiocGenerics biomaRt BSgenome_Mmusculus_UCSC_mm10 corpcor doParallel foreach fpc GenomicRanges hwriter IRanges iterators mclust QTLRel regress rhdf5 Rsamtools RUnit VariantAnnotation XML]; };
-  DOSE = derive2 { name="DOSE"; version="3.0.10"; sha256="13m5akx9hi11906sbrbcz8q36m9h8i0wqm5323bdnlprv217m8fq"; depends=[AnnotationDbi BiocParallel DO_db fgsea ggplot2 GOSemSim igraph qvalue reshape2 S4Vectors scales]; };
-  DRIMSeq = derive2 { name="DRIMSeq"; version="1.2.0"; sha256="1iiqb3ccxh9y2sc913sw7lcd16bq54kj6z5hk6f7khsgwy84g5q6"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges reshape2 S4Vectors]; };
-  DSS = derive2 { name="DSS"; version="2.14.0"; sha256="09452x6cs16b2fxx7h74midxkla7cc46paqkxhilx82nf2yrjzrm"; depends=[Biobase bsseq]; };
-  DTA = derive2 { name="DTA"; version="2.20.0"; sha256="16bp4gy8ifc3ag24d6npfzvwhv4by371qilqsxnmd677pq75ccx6"; depends=[LSD scatterplot3d]; };
-  DeMAND = derive2 { name="DeMAND"; version="1.4.0"; sha256="03w9vcv8ji82hhyy70mh5smib565gzjdp4bl7i1h1y3wjmsrq760"; depends=[KernSmooth]; };
-  DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.16.0"; sha256="0p8vg1b8arpv01cdgq37c0mfmkd824b47cd8cpdzf7nhrhq53w65"; depends=[ggplot2 limSolve pcaMethods]; };
-  DeepBlueR = derive2 { name="DeepBlueR"; version="1.0.11"; sha256="1zqr0bdsf4xlkdqrpg1ihc287gppw56p9p9smy97npm2dnqygw6f"; depends=[data_table diffr dplyr filehash foreach GenomeInfoDb GenomicRanges R_utils RCurl rjson rtracklayer settings stringr withr XML]; };
-  DiffBind = derive2 { name="DiffBind"; version="2.2.12"; sha256="0w3dwhjkf0sc7bd3m13gwym03j3pyli3xy2y7dqsqn8mhm64bqcy"; depends=[amap BiocParallel DESeq2 dplyr edgeR GenomicAlignments GenomicRanges gplots IRanges lattice limma locfit RColorBrewer Rcpp Rsamtools S4Vectors SummarizedExperiment systemPipeR zlibbioc]; };
-  DiffLogo = derive2 { name="DiffLogo"; version="1.4.0"; sha256="1pla3izw79il49vlrp21shyq13xvg6vbayrjs6kbhjih738x0i5j"; depends=[cba]; };
-  Director = derive2 { name="Director"; version="1.0.0"; sha256="0g0z2pp4jk9a3sfcidq8abgwnki8za73wzvpm4xdzy5g6lrcf3y7"; depends=[htmltools]; };
-  DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.16.0"; sha256="0jrjragn40qjbrm7amg066jbl1ypxzs3h5cbd7vv35iwwvzgmgr3"; depends=[BiocGenerics IRanges S4Vectors]; };
-  DriverNet = derive2 { name="DriverNet"; version="1.14.0"; sha256="19n396565sngzc3pk2dibqsza9pmp8dm1nrhlipv663r46s6j6kz"; depends=[]; };
-  DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.14.0"; sha256="0pbaa9dg8g0bwky2mjr3wjpavf82xd564c1wx813ivsdx8a69pnm"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; };
-  DupChecker = derive2 { name="DupChecker"; version="1.12.0"; sha256="0yrlx3w8ndij5ynfyjh0y5xyldsnsyhgw7ilnx728vfxp7zgw6fv"; depends=[R_utils RCurl]; };
-  DynDoc = derive2 { name="DynDoc"; version="1.52.0"; sha256="0nd7873m3zgyx1ryyhy9bsvzzkvdvqggk5sbnai4aph2hy2lbk1a"; depends=[]; };
-  EBImage = derive2 { name="EBImage"; version="4.16.0"; sha256="0gbl9waszvkavw68npsjq1c7yhqljgb2r0qx4f8i05cp8i0yr3rx"; depends=[abind BiocGenerics fftwtools jpeg locfit png tiff]; };
-  EBSEA = derive2 { name="EBSEA"; version="1.2.0"; sha256="1ikkj4mmr1rdcxsy1anc3ik3vy1hn0v262h17751y64bk2djvycj"; depends=[edgeR gtools limma]; };
-  EBSeq = derive2 { name="EBSeq"; version="1.14.0"; sha256="14ny417fijjnrkz5hjj8z8s6dbrqxx0cyi85585g06nrv8mm1hhl"; depends=[blockmodeling gplots testthat]; };
-  EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.8.0"; sha256="0ahmsxqixapdjpwsr1wnmk7lq5fnbqpq7vsbs9qk2a5pl2lxzqd0"; depends=[EBSeq]; };
-  EBarrays = derive2 { name="EBarrays"; version="2.38.0"; sha256="1r00rdd5zlm29jc0yq3jns08cv67f9wk6lia56m52zscqcji6nvw"; depends=[Biobase cluster lattice]; };
-  EBcoexpress = derive2 { name="EBcoexpress"; version="1.18.0"; sha256="0lhcvd49rhmcdbmxizivcn7wi9bv0av2p9mz4grpnb3a0r6hjgdm"; depends=[EBarrays mclust minqa]; };
-  EDASeq = derive2 { name="EDASeq"; version="2.8.0"; sha256="0biwxx1ssqj3isc15i7crm05cyapm47ny4jks8wr9pqha715myai"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics biomaRt Biostrings DESeq GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; };
-  EDDA = derive2 { name="EDDA"; version="1.12.0"; sha256="1ra5jdngpiif9wd322ncg72ik2wkapcn7z3raw6rb5ii8g5706fc"; depends=[baySeq DESeq edgeR Rcpp ROCR snow]; };
-  EGAD = derive2 { name="EGAD"; version="1.2.0"; sha256="04zaykhl3dkaqy73dsgj0kqghisxgck2fjbwrvlc9j8rb2rggnmd"; depends=[affy arrayQualityMetrics Biobase GEOquery gplots igraph impute limma MASS Matrix plyr RColorBrewer RCurl zoo]; };
-  EGSEA = derive2 { name="EGSEA"; version="1.2.0"; sha256="0wd4a89l8isbgqcyls8pw5h1l68qd4k1c7nxci7q4d86vrv3xzwd"; depends=[AnnotationDbi Biobase edgeR EGSEAdata gage ggplot2 globaltest gplots GSVA HTMLUtils hwriter limma metap org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview RColorBrewer safe stringi topGO]; };
-  ELBOW = derive2 { name="ELBOW"; version="1.10.0"; sha256="0x86czjfzpkxs9z6fn6siapwj6320f096bzg3bfjzaa387g89sk0"; depends=[]; };
-  ELMER = derive2 { name="ELMER"; version="1.4.1"; sha256="1q60yi3wqjmm2y6dfl5qjgxzhdjd22vsdsnan8mw1fl2kljjlbdl"; depends=[BiocGenerics ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra Homo_sapiens IlluminaHumanMethylation450kanno_ilmn12_hg19 IRanges minfi reshape S4Vectors]; };
-  EMDomics = derive2 { name="EMDomics"; version="2.4.0"; sha256="0fkyvmib34kwz4zzp3f0miw9bhn87hmbk0j94gla2fgxvxwby1sf"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; };
-  ENCODExplorer = derive2 { name="ENCODExplorer"; version="2.0.6"; sha256="0876lfyh5584nq6sqz3yyc4ixl1pfyx1wamhdfcyq6c86yi5prgp"; depends=[data_table dplyr DT jsonlite RCurl shiny shinythemes stringi stringr tidyr]; };
-  ENVISIONQuery = derive2 { name="ENVISIONQuery"; version="1.22.0"; sha256="1h3nz1k2rl2b14hh61yqq3dng3h3k3qp48w8izfsdwjm9imxs3kb"; depends=[rJava XML]; };
-  ENmix = derive2 { name="ENmix"; version="1.10.0"; sha256="17ppsfbl68fsck4nyda4x8k5sdymn52dgkvky1q4cri3xvn2kkpj"; depends=[Biobase doParallel foreach geneplotter impute MASS minfi preprocessCore sva wateRmelon]; };
-  EWCE = derive2 { name="EWCE"; version="1.2.0"; sha256="1iq62cn389sa0h3y6rj61n51a1wkjcpnq9a3la2gavddd0iqsbl8"; depends=[biomaRt ggplot2 reshape2]; };
-  EasyqpcR = derive2 { name="EasyqpcR"; version="1.16.0"; sha256="1hlhvpz18q6wfwmfj0fs8saacpyaild2p7qwmgmndcv2lqpmgcrh"; depends=[gWidgetsRGtk2 matrixStats plotrix plyr]; };
-  EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.2.0"; sha256="0l7dq2ww2vi39iipazfv71i0bw6j029x3llbnd15sf7lpsplc9df"; depends=[]; };
-  EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.4.0"; sha256="013y7iygzf7vy1g34c2ww55m4w1173mxbwi4pn6x75r1fmnmvkai"; depends=[ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats]; };
-  EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.4.6"; sha256="1xijwplmlcdi2rqp8frsbwgxby6k2mnjbfv2dw560rgcmys7n395"; depends=[AnnotationDbi Biobase biocGraph ComplexHeatmap DESeq2 EDASeq edgeR geneplotter GO_db graph GSEABase hwriter KEGGgraph KEGGREST limma MASS pathview ReportingTools Rgraphviz S4Vectors safe SPIA SummarizedExperiment topGO]; };
-  ExiMiR = derive2 { name="ExiMiR"; version="2.16.0"; sha256="11pr3jlzm8hm4bizpgwvmr1ylb41rd487mp71890paqwhv91abq1"; depends=[affy affyio Biobase limma preprocessCore]; };
-  ExperimentHub = derive2 { name="ExperimentHub"; version="1.0.0"; sha256="15254v73vi7vr7cky29i58np5ljq7iawmffrb1vir54snpgw72q9"; depends=[AnnotationHub BiocGenerics BiocInstaller S4Vectors]; };
-  ExperimentHubData = derive2 { name="ExperimentHubData"; version="1.0.0"; sha256="1i55z69idxk3zpiypid045mssvfbysbincxfp0z8sh5gf0dipj9d"; depends=[AnnotationHubData BiocCheck BiocGenerics BiocInstaller curl DBI ExperimentHub httr S4Vectors]; };
-  ExpressionAtlas = derive2 { name="ExpressionAtlas"; version="1.2.0"; sha256="07asxjzplx05jkxm05lxny4np9yw0i9ir0pbhg76dxnx7k1x1bv4"; depends=[Biobase httr limma S4Vectors SummarizedExperiment XML xml2]; };
-  ExpressionView = derive2 { name="ExpressionView"; version="1.26.0"; sha256="0fy2cay5s9ypbrdjj6v5n8l99pq0fggw6gl9xh451vr2j0c8cmr8"; depends=[AnnotationDbi bitops caTools eisa GO_db isa2 KEGG_db]; };
-  FEM = derive2 { name="FEM"; version="3.2.0"; sha256="1ivhzap6hcdwpy8yf1sl4gh53c24nzm22br08z8g99wl3q3apsg0"; depends=[AnnotationDbi BiocGenerics corrplot graph igraph impute limma marray Matrix org_Hs_eg_db]; };
-  FGNet = derive2 { name="FGNet"; version="3.8.0"; sha256="07v32575vws879745zc1c75rlwbdrybijhbc3hs7s4w4nz574lfc"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; };
-  FISHalyseR = derive2 { name="FISHalyseR"; version="1.8.0"; sha256="0fn92g2zzv35xhd28p5zb3qqhqy9hflz4d1sk3cjajpav26k9dnd"; depends=[abind EBImage]; };
-  FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.10.0"; sha256="0ccp7s4qg2mf0mnz9hvasscgc18nmqmjrfwj9k2x1nv6rhph51cv"; depends=[fda MASS]; };
-  FamAgg = derive2 { name="FamAgg"; version="1.2.1"; sha256="16iaj8zn12kq89sksq5dqgfxyb5048vdfhvjqgvp455vi74jkx9z"; depends=[BiocGenerics gap igraph kinship2 Matrix survey]; };
-  FindMyFriends = derive2 { name="FindMyFriends"; version="1.4.0"; sha256="1r2jqrsgsmrlz3fa8qp7pb4bxh6am2xmgafnk5xh679kyvdhp4dh"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; };
-  FitHiC = derive2 { name="FitHiC"; version="1.0.0"; sha256="1pzywxdn2qkkfkhnf1n4d9fnvz3kz4301kxqmszj3d10z2wlhzab"; depends=[data_table fdrtool Rcpp]; };
-  FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.6.0"; sha256="06z3wandk8vaabkbmm0w6jaknimysfm16r351alg28ajznxqiw1n"; depends=[jsonlite RCurl XML]; };
-  FlowSOM = derive2 { name="FlowSOM"; version="1.6.0"; sha256="1lbyxhs59cc3mfqbgskgnx5vbly6rr2dswn3hwlw5nh2idpwnwfn"; depends=[BiocGenerics ConsensusClusterPlus flowCore flowUtils igraph tsne XML]; };
-  FourCSeq = derive2 { name="FourCSeq"; version="1.8.0"; sha256="0n0zsmh48vy756wg3rmnsqsl0kyy8wl1sm97c0w1yp4wpak36qqp"; depends=[Biobase Biostrings DESeq2 fda GenomicAlignments GenomicRanges ggbio ggplot2 gtools LSD Matrix reshape2 Rsamtools rtracklayer SummarizedExperiment]; };
-  FunChIP = derive2 { name="FunChIP"; version="1.0.0"; sha256="1l0hyg3scp0b1xsx7xl8x6629iaf155k50vykjk17kb6aand5p19"; depends=[doParallel fda foreach GenomeInfoDb GenomicAlignments GenomicRanges Rcpp Rsamtools shiny]; };
-  FunciSNP = derive2 { name="FunciSNP"; version="1.18.0"; sha256="03wzrrdhnp6svf4vy907h6bbnpfgrbqhqabsah37qzld15qm2xs2"; depends=[Biobase BiocGenerics ChIPpeakAnno FunciSNP_data GenomicRanges ggplot2 IRanges plyr reshape Rsamtools rtracklayer S4Vectors scales snpStats TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; };
-  GAprediction = derive2 { name="GAprediction"; version="1.0.0"; sha256="18675g9405x4bhbgk1y3lc011cz409qgqgmnsr9pg1cr1cpfcgqh"; depends=[glmnet Matrix]; };
-  GEM = derive2 { name="GEM"; version="1.0.0"; sha256="12y8pnbvfmid0spid61nxlf79nnq64yd1q6as7mi95nqgf498lcb"; depends=[ggplot2]; };
-  GENE_E = derive2 { name="GENE.E"; version="1.14.0"; sha256="07qc96cja92zbs87qmrpxl6jym96vazygybmjvkxzb3cmw8ivcrg"; depends=[RCurl rhdf5]; };
-  GENESIS = derive2 { name="GENESIS"; version="2.4.0"; sha256="1gknm10fjgry5arz60y6yvkdpiwf1nkvyyxdgh2jbslz6ypgcy57"; depends=[Biobase gdsfmt graph GWASTools SeqArray SeqVarTools]; };
-  GEOmetadb = derive2 { name="GEOmetadb"; version="1.34.0"; sha256="0gjzhx3x1945ny8wqp1w6gwgbx81wsqbgc9l7sd2wqnf85w5y513"; depends=[GEOquery RSQLite]; };
-  GEOquery = derive2 { name="GEOquery"; version="2.40.0"; sha256="1p4dsmbibhrjdffkh8z1fff4j85jczwn4djnnpj2ifvz2x05q3vc"; depends=[Biobase httr RCurl XML]; };
-  GEOsearch = derive2 { name="GEOsearch"; version="1.0.0"; sha256="1xz3mizjh1nfmc4726jjj38qdn5byjwlinwbd3j0k2qw5dvzmjaj"; depends=[org_Hs_eg_db org_Mm_eg_db RCurl]; };
-  GEOsubmission = derive2 { name="GEOsubmission"; version="1.26.1"; sha256="0niagqjl5sqi4frjj23glgib0js1gf7p7lj4qbz8lvkg1arj2kba"; depends=[affy Biobase]; };
-  GEWIST = derive2 { name="GEWIST"; version="1.18.0"; sha256="1faw43mvv3v9yl9lbllx0gj588i7r9rfm453mwq80v9adllrnnkw"; depends=[car]; };
-  GGBase = derive2 { name="GGBase"; version="3.36.0"; sha256="1wmxv6wl6d050xjc0sc0z2i74y3xnnr6vmdynipcncbsrmsw91gv"; depends=[AnnotationDbi Biobase BiocGenerics digest genefilter GenomicRanges IRanges limma Matrix S4Vectors snpStats SummarizedExperiment]; };
-  GGtools = derive2 { name="GGtools"; version="5.10.1"; sha256="1cngmdk9ggp38gbp3kqs74ixa5ak5cm1n09z1lrhg110byim79ry"; depends=[AnnotationDbi biglm Biobase BiocGenerics Biostrings bit data_table ff GenomeInfoDb GenomicRanges GGBase ggplot2 Gviz hexbin Homo_sapiens IRanges iterators reshape2 ROCR Rsamtools rtracklayer S4Vectors snpStats VariantAnnotation]; };
-  GLAD = derive2 { name="GLAD"; version="2.38.0"; sha256="1din6jgb2n6qs6g10133mc506y3bmc2gpwdcj6q8fm3jwq3iw769"; depends=[]; };
-  GMRP = derive2 { name="GMRP"; version="1.2.0"; sha256="17n77baq513wxnh0dh313h7bpj01jkfs4ybac1w5bmsqbafnakz8"; depends=[diagram GenomicRanges plotrix]; };
-  GOFunction = derive2 { name="GOFunction"; version="1.22.0"; sha256="1gn9z2si5jg7db28ldmgj03b0acv9mq884srmgjyq3ar705hkvd9"; depends=[AnnotationDbi Biobase DBI GO_db graph Rgraphviz SparseM]; };
-  GOSemSim = derive2 { name="GOSemSim"; version="2.0.4"; sha256="1ii12y5yb6mby76c193ampvjk0klsx3kl0h6qmr3359sdx9mcbiq"; depends=[AnnotationDbi GO_db Rcpp]; };
-  GOSim = derive2 { name="GOSim"; version="1.12.0"; sha256="0539da5ljil1l158bdrj7xmgj7da33kwqk8ng5snwv9jzvmynrdn"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; };
-  GOTHiC = derive2 { name="GOTHiC"; version="1.10.0"; sha256="17n51iw61xyfiladvrz36ksvj6sdfgmhbxs9hx25g3j5biv0sxw0"; depends=[BiocGenerics Biostrings BSgenome data_table GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; };
-  GOexpress = derive2 { name="GOexpress"; version="1.8.1"; sha256="00gnznvyg2mpk6cv5jk842h71awikw3qbzg43vl72cxcb8iai7fj"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer RCurl stringr VennDiagram]; };
-  GOpro = derive2 { name="GOpro"; version="1.0.0"; sha256="0wypc72p940b2jh8s83k4hs5m4flvpr724xgzscygcn3v25b23c7"; depends=[AnnotationDbi BH dendextend doParallel foreach GO_db IRanges MultiAssayExperiment org_Hs_eg_db Rcpp S4Vectors]; };
-  GOstats = derive2 { name="GOstats"; version="2.40.0"; sha256="0g2czm94zhzx92z7y2r4mjfxhwml7bhab2db6820ks8nkw1zvr9n"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL]; };
-  GOsummaries = derive2 { name="GOsummaries"; version="2.8.0"; sha256="05aws7ln6jxisgmxkx3m3lfz87i8ayy8bdm8lgjyhhskf5gq7yzn"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; };
-  GRENITS = derive2 { name="GRENITS"; version="1.26.0"; sha256="1x1rxs3id7kbp7lf3a8460qh6p0mlhx1w33yyy20cd45y407xxji"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; };
-  GRmetrics = derive2 { name="GRmetrics"; version="1.0.0"; sha256="0pviyq23gsivqxm9pzxa5d911f32m3p8gkav9hbsn2fm2x7g8k07"; depends=[drc ggplot2 plotly S4Vectors SummarizedExperiment]; };
-  GSALightning = derive2 { name="GSALightning"; version="1.2.0"; sha256="0hxjlnzwk16s1qxnd1dsd8f9zbwqnpq7vyrr3ag6yq4xm6rksr9v"; depends=[data_table Matrix]; };
-  GSAR = derive2 { name="GSAR"; version="1.8.0"; sha256="0wdz3jx1dnw6w71r3spfi09nqyndvb0f610qci50s824k593aglp"; depends=[igraph]; };
-  GSCA = derive2 { name="GSCA"; version="2.4.0"; sha256="1fxc3s891flai43j8i7bp9q3v6ynkbd4yx6y5rgvf8360bl62s3z"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; };
-  GSEABase = derive2 { name="GSEABase"; version="1.36.0"; sha256="0l2x7yj7lfb0m2dmsav5ib026dikpgl4crdckrnj776yy08lgxpj"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; };
-  GSEAlm = derive2 { name="GSEAlm"; version="1.34.0"; sha256="0ykxpki36spgb562805k5hi2cyp984gjr2flq591vc8qhz87d1ry"; depends=[Biobase]; };
-  GSRI = derive2 { name="GSRI"; version="2.22.0"; sha256="1dml01y75yc2f3ra65ha4ah991mvlzdnhkzllqxlah0gayvbhw52"; depends=[Biobase fdrtool genefilter GSEABase les]; };
-  GSReg = derive2 { name="GSReg"; version="1.8.0"; sha256="0ccghcpdpaa3dfaxbg682jll7gj6yh6513adffyi7q9qif6rz4jx"; depends=[]; };
-  GSVA = derive2 { name="GSVA"; version="1.22.4"; sha256="1v0znan5xyd1b3cr83ag83sk5ipnifn3882qcnfz6d26b5rq5cdz"; depends=[Biobase BiocGenerics GSEABase]; };
-  GUIDEseq = derive2 { name="GUIDEseq"; version="1.4.1"; sha256="0n21pd96q9xj6ljamq40zld0276dj4raiwdak8l27y37n1xq5bna"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table GenomeInfoDb GenomicAlignments GenomicRanges hash IRanges limma matrixStats Rsamtools S4Vectors]; };
-  GWASTools = derive2 { name="GWASTools"; version="1.20.0"; sha256="07ql1iihqvmks7pzlwab6hffsp7d6by8n7sq9mgi5zqwdy1kdyw3"; depends=[Biobase DBI DNAcopy gdsfmt GWASExactHW lmtest logistf ncdf4 quantsmooth RSQLite sandwich survival]; };
-  GenRank = derive2 { name="GenRank"; version="1.2.0"; sha256="1sp43mr40dnfmxavqrn3bhbwkvrx229q7kvbwv4xbzl9980y2mwq"; depends=[matrixStats reshape2 survcomp]; };
-  GenVisR = derive2 { name="GenVisR"; version="1.4.1"; sha256="0a4nnq7nkmza8kyx6jq321rzfh843cj9yjn36pqam2w3gkx4a5q2"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings DBI FField GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales viridis]; };
-  GeneAnswers = derive2 { name="GeneAnswers"; version="2.16.0"; sha256="164vas8gkrs1q9s3vhnb1f1lkqlndd5n2v7q0hb0rndjg0b08ryb"; depends=[annotate Biobase downloader Heatplus igraph MASS RBGL RColorBrewer RCurl RSQLite XML]; };
-  GeneBreak = derive2 { name="GeneBreak"; version="1.4.0"; sha256="153a1ca44apavrf09fc8gwyvqbln6rwjpcjq6cxa2ixw714xvmk1"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; };
-  GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.20.0"; sha256="0v26wyibllqw1mwncb4h8m3bg0x8zm9iv6apadp7n91x0zaqflmd"; depends=[Biobase PGSEA]; };
-  GeneGA = derive2 { name="GeneGA"; version="1.24.0"; sha256="19jr504whini0csk8cir3rs8fwccnrpf84kpnhphsc6j7ypy45qd"; depends=[hash seqinr]; };
-  GeneGeneInteR = derive2 { name="GeneGeneInteR"; version="1.0.0"; sha256="15i67aqjvss9g8irh6ifr000y37irxg2glpg9qajm9kpwjvsr8kf"; depends=[data_table FactoMineR GenomicRanges GGtools igraph IRanges kernlab mvtnorm plspm rioja Rsamtools snpStats]; };
-  GeneMeta = derive2 { name="GeneMeta"; version="1.46.0"; sha256="1zxn1wm8wzia561hgljdyp1djidr1bzzb5kxpb73jwpxb43j8pd5"; depends=[Biobase genefilter]; };
-  GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.16.0"; sha256="0mkd7ny0h0j53daxz7zwcbgnk85rmkpbsj0p4l205g3nfwa06iip"; depends=[graph plyr Rcpp]; };
-  GeneOverlap = derive2 { name="GeneOverlap"; version="1.10.0"; sha256="1y8n4r2gps65sz1yhhzr1n0frv79vwm2j9vxvs75v6c3a236x4r0"; depends=[gplots RColorBrewer]; };
-  GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.30.0"; sha256="0ac6qqzlnl29hkxyxyn6rvffg8klfp9qps0bx9hgmmhj60iwzqdi"; depends=[affxparser Biobase Biostrings RColorBrewer S4Vectors]; };
-  GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.18.0"; sha256="04asjxn49vipaidammf568gf4gfck6d0300hdydxkpbzm8frpn0n"; depends=[Biobase limma MASS survival]; };
-  GeneSelector = derive2 { name="GeneSelector"; version="2.24.0"; sha256="1d99hqmp5jrwaq08svzvliqfli9r4731gmj3d9ly6rqaiba003zf"; depends=[Biobase limma multtest samr siggenes]; };
-  GeneticsDesign = derive2 { name="GeneticsDesign"; version="1.42.0"; sha256="0mx55dqrib9ik0nvh96l5nz80hslz7ihi2lri98nlfanm1ckmgjn"; depends=[gmodels gtools mvtnorm]; };
-  GeneticsPed = derive2 { name="GeneticsPed"; version="1.36.0"; sha256="0z4zqni9sncigi89c2vvw7pian2zlni9rhbc9l39ig2970zyvh7s"; depends=[gdata genetics MASS]; };
-  GenoGAM = derive2 { name="GenoGAM"; version="1.2.1"; sha256="04r18wff2zjkb0hh731ssl7jplb8kn4lrmls0zzfl6iqgh539vvf"; depends=[BiocParallel Biostrings data_table DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges IRanges mgcv reshape2 Rsamtools S4Vectors SummarizedExperiment]; };
-  GenomeGraphs = derive2 { name="GenomeGraphs"; version="1.34.0"; sha256="0088s233lj2p0vy5wdw049zgakppvzk1zf07k628yaz8ckbgjg99"; depends=[biomaRt]; };
-  GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.10.3"; sha256="18g24cf6b3vi13w85ki2mam6i2gl4yxr1zchyga34xc3dkdngzrw"; depends=[BiocGenerics IRanges RCurl S4Vectors]; };
-  GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.10.1"; sha256="1dilghbsyf64iz5c0kib2c7if72x7almd5w3ali09a2b2ff2mcjk"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; };
-  GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.26.4"; sha256="1y16lqach0v3ym5zhdhj4r2imfi0kpa0djlb51hj85yf7xkzwdlb"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RSQLite rtracklayer S4Vectors XVector]; };
-  GenomicFiles = derive2 { name="GenomicFiles"; version="1.10.3"; sha256="03yqkl2yjdz999j1y7azcs16vg0vydrqs6sxcfkgn11fiwi6i3l2"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; };
-  GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.8.1"; sha256="1lqwyz6ms6iw8sl2l52xbaaag10lp3k8s03c9326hxhyy3ba7c5f"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; };
-  GenomicRanges = derive2 { name="GenomicRanges"; version="1.26.4"; sha256="1789ycqzv20d8p1axkxrhsz9v0ww6w1dk2mfvm85p8j53zd1f67c"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; };
-  GenomicTuples = derive2 { name="GenomicTuples"; version="1.8.3"; sha256="1wxcz06gywipyv0cnw8w7f9wccbn90l0h07zspwfd0l0d4rmqh1p"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; };
-  Genominator = derive2 { name="Genominator"; version="1.28.0"; sha256="0aayjr0sw9xqy4y2xyfbmbk7cbc81c5f0kf6fhdiswxl1v5f43l4"; depends=[BiocGenerics DBI GenomeGraphs IRanges RSQLite]; };
-  Glimma = derive2 { name="Glimma"; version="1.2.1"; sha256="0gqkm41rsdkgq15b3w2hv3n77kp85sirnypdav7g3lq00r8q69iv"; depends=[DESeq2 edgeR]; };
-  GlobalAncova = derive2 { name="GlobalAncova"; version="3.42.0"; sha256="0wxs7l4jx4c54bafvif48c4rlnv5vgl658403j4gp6w2xapbi4dv"; depends=[annotate AnnotationDbi corpcor globaltest]; };
-  GoogleGenomics = derive2 { name="GoogleGenomics"; version="1.6.0"; sha256="12jpp6j4pzx5agnshzxa42izxby9iwl5vpaj2c7bh1m07xn35qkg"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicRanges httr IRanges rjson Rsamtools S4Vectors VariantAnnotation]; };
-  GraphAT = derive2 { name="GraphAT"; version="1.46.0"; sha256="0gynda9y1px750ffgxprs8nlq85gxfkggvg9g0qdwsw32gn5s2nw"; depends=[graph MCMCpack]; };
-  GraphAlignment = derive2 { name="GraphAlignment"; version="1.38.0"; sha256="1p6qswivfmapm0qh58r0chp9jqc0yljpx9c405viss36k2sxv7k0"; depends=[]; };
-  GraphPAC = derive2 { name="GraphPAC"; version="1.16.0"; sha256="0xmcg6d5v7qzi9kxvgfigxz2zv0fgpsqrvwq3dckvziqpv214dyc"; depends=[igraph iPAC RMallow TSP]; };
-  GreyListChIP = derive2 { name="GreyListChIP"; version="1.6.0"; sha256="16rv1z40j4wkhify0xf24afd7f40pmwjm1r1nq5zhrz4im7skc8r"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer SummarizedExperiment]; };
-  Guitar = derive2 { name="Guitar"; version="1.12.0"; sha256="1mfp56d4wqml5ki5mayq3cd4zidgm0jv1gxl9g04nxp7jzzcm6c1"; depends=[GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer]; };
-  Gviz = derive2 { name="Gviz"; version="1.18.2"; sha256="0gdd1h474gyy7g5cwrjzy6dwddblpg9gqnig5gdcbdzl0ll8kpc4"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; };
-  HCsnip = derive2 { name="HCsnip"; version="1.14.0"; sha256="1vmh1j954pj6xfafcgwc6wfw066clqdggc79360anbr9rlfsmjkw"; depends=[Biobase clusterRepro coin fpc impute randomForestSRC sigaR sm survival]; };
-  HDF5Array = derive2 { name="HDF5Array"; version="1.2.1"; sha256="07c4xp9v6rvi2zpg5r504rjp041h438djz4x1d28ryxpmp9sgj1a"; depends=[BiocGenerics IRanges rhdf5 S4Vectors]; };
-  HDTD = derive2 { name="HDTD"; version="1.8.0"; sha256="0diq8m2qrv42hknyvhzgjxw17jykxaw1qifpm4k4fidp55dgd9qf"; depends=[]; };
-  HELP = derive2 { name="HELP"; version="1.32.0"; sha256="0qypbj5vvv0r75izdarh48y94jc1b0msn7rnhkcqkpqcwpdfxgpl"; depends=[Biobase]; };
-  HEM = derive2 { name="HEM"; version="1.46.0"; sha256="0gsqfpg10ywskcn782h7saqqhd8y72x4cxd3z9vhwdz3rkf99maf"; depends=[Biobase]; };
-  HIBAG = derive2 { name="HIBAG"; version="1.10.0"; sha256="18dr6y6fw85hip4njzaax9sjr02xbwcicjmrxsdq4g8gx5r0rrsh"; depends=[]; };
-  HMMcopy = derive2 { name="HMMcopy"; version="1.16.0"; sha256="1syy98jgim2adchcc4ni1xji3ssixbawqafrkzq68fspsh467yc6"; depends=[geneplotter IRanges]; };
-  HTSFilter = derive2 { name="HTSFilter"; version="1.14.1"; sha256="145lbxcv0fqqby9y5fzrijvmm6rhmqr0a6n49n8syq03ibg1pa04"; depends=[Biobase BiocParallel DESeq DESeq2 edgeR]; };
-  HTSanalyzeR = derive2 { name="HTSanalyzeR"; version="2.26.0"; sha256="0zh3zlkgiwk1bsxv3j4bwf300531ifpg5hyniwal732zm7xbbiq3"; depends=[AnnotationDbi biomaRt BioNet cellHTS2 graph GSEABase igraph RankProd]; };
-  HTSeqGenie = derive2 { name="HTSeqGenie"; version="4.4.0"; sha256="121z3hmpgv3bhg28ns1k570s11gicmsrp4a2y4jndarxrzdi5f7k"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment VariantAnnotation VariantTools]; };
-  HTqPCR = derive2 { name="HTqPCR"; version="1.28.0"; sha256="19gfjgf7d2xqb9vr5sg45yp2d0jmqx3s2s2y71wdg48508xf3990"; depends=[affy Biobase gplots limma RColorBrewer]; };
-  Harman = derive2 { name="Harman"; version="1.2.0"; sha256="0hdravpr71mp34ix486nx7czrfz9pqg045m4c7rs7d10p0vb76cn"; depends=[Rcpp]; };
-  Harshlight = derive2 { name="Harshlight"; version="1.46.0"; sha256="069826gdbb4xzdbizxzfn8z681vvrchk20k8awd7r7n3i01gbz5f"; depends=[affy altcdfenvs Biobase]; };
-  Heatplus = derive2 { name="Heatplus"; version="2.20.0"; sha256="0svmlq531jasggndz1n8b6sh97k9pj1i9a0w2k5iz17cpg89w9sp"; depends=[RColorBrewer]; };
-  HelloRanges = derive2 { name="HelloRanges"; version="1.0.1"; sha256="11z2d0d98l0wgxd0dicrph6ldrgvdrngibhgkknfshzcs4c6yqkv"; depends=[BiocGenerics Biostrings BSgenome docopt GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; };
-  HiTC = derive2 { name="HiTC"; version="1.18.1"; sha256="0l3a7f4caj2ijd54swjgz9893hy5yn2bv0gp9mjibj5x0hgrwbmf"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; };
-  HilbertCurve = derive2 { name="HilbertCurve"; version="1.4.0"; sha256="132dn6l3g70wfznwfqg33f7saqn8av2p8nbrbymipavy5jmaki1s"; depends=[circlize GenomicRanges HilbertVis IRanges png]; };
-  HilbertVis = derive2 { name="HilbertVis"; version="1.32.0"; sha256="1k2lmvjvzfj73fpfd3ri4ifwvb30kd5k55cssr0cz2fx37rd8hiv"; depends=[lattice]; };
-  HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.32.0"; sha256="1v0s125k56nmjpmk4352ygyzi0w8is8ispqgyjcgyfhzn4fs46aw"; depends=[HilbertVis]; };
-  HybridMTest = derive2 { name="HybridMTest"; version="1.18.0"; sha256="0g62cgmy6g150fhjx2v4xk8mg6c5glz2h6ry89dr8pk5czfxqwcj"; depends=[Biobase fdrtool MASS survival]; };
-  IHW = derive2 { name="IHW"; version="1.2.0"; sha256="1m8m7zhj0hwdnb4z93dh918jynp3amnxwv0yl9zflf54nwg0p8y0"; depends=[BiocGenerics fdrtool lpsymphony slam]; };
-  IMPCdata = derive2 { name="IMPCdata"; version="1.8.0"; sha256="15gskfs84anw2x902zhldsh8hzfhyrv9vjlb8qplkmd7prskjs48"; depends=[rjson]; };
-  INPower = derive2 { name="INPower"; version="1.10.0"; sha256="135xlhcv3h1rkipdy7vp2knr8gqgcfcsadcrl9a477iaps1ljfg1"; depends=[mvtnorm]; };
-  INSPEcT = derive2 { name="INSPEcT"; version="1.4.0"; sha256="15bn5x42igdxrj1fg9fzi2rgy1c24nxgwpqxxipqkippr985ybvg"; depends=[Biobase BiocGenerics BiocParallel deSolve GenomicAlignments GenomicFeatures GenomicRanges IRanges preprocessCore pROC rootSolve Rsamtools S4Vectors]; };
-  IONiseR = derive2 { name="IONiseR"; version="1.4.4"; sha256="09vv5h8zwwlkc3azw1hb166wbhafdz9q7pd0xxcckwm596sbpnc6"; depends=[BiocGenerics Biostrings data_table dplyr ggplot2 magrittr rhdf5 ShortRead tidyr XVector]; };
-  IPO = derive2 { name="IPO"; version="1.0.0"; sha256="05g41kx40n7kv8cc51khg6wql7i8p5h53g873xvccld5vpc8dish"; depends=[CAMERA rsm xcms]; };
-  IPPD = derive2 { name="IPPD"; version="1.22.0"; sha256="1p0c5wr7lcarmlchfglmjd7d8r38mm262g8wyj7dljknlbw1p2n1"; depends=[bitops digest MASS Matrix XML]; };
-  IRanges = derive2 { name="IRanges"; version="2.8.2"; sha256="0x8h74ik3xwdnwrkn89hq5ll0qa1lp9jgzlbmpa02dpws7snfwyr"; depends=[BiocGenerics S4Vectors]; };
-  ISoLDE = derive2 { name="ISoLDE"; version="1.2.0"; sha256="1j9ckl0xq10scrrc0nr7522pz39bd5wapmpkgnlz93rflf90jq3g"; depends=[]; };
-  ITALICS = derive2 { name="ITALICS"; version="2.34.0"; sha256="1i4b94wngb6306dq5mx9vnmv69i6pl19c7kwrwmdfiq8hsl47wq1"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; };
-  IVAS = derive2 { name="IVAS"; version="1.6.0"; sha256="04qa9i4jkq3w040y3pzklld5p8v1qirr5vpglj3r8i01mj5r7krf"; depends=[AnnotationDbi BiocGenerics doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges lme4 Matrix S4Vectors]; };
-  Icens = derive2 { name="Icens"; version="1.46.0"; sha256="0mfz0k2p2jsbm1rchylrl2k222p96xjdplnl0zgkhv32747svpv8"; depends=[survival]; };
-  IdMappingAnalysis = derive2 { name="IdMappingAnalysis"; version="1.18.0"; sha256="1v98zqp5hyix49rlzvpiv289fsivcs602xi9bfhs15p9z33599qy"; depends=[Biobase boot mclust R_oo rChoiceDialogs RColorBrewer]; };
-  IdMappingRetrieval = derive2 { name="IdMappingRetrieval"; version="1.22.0"; sha256="0kvs65qny43q4s0nkm9g8giv4d5qajpr12620208jhwbrm6jpg99"; depends=[AffyCompatible biomaRt ENVISIONQuery R_methodsS3 R_oo rChoiceDialogs RCurl XML]; };
-  IdeoViz = derive2 { name="IdeoViz"; version="1.8.0"; sha256="1irxfpdf8i5zx96bw1v9pz5v0lrjb2z5gxzmfyibgivfp6dl9xj6"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; };
-  Imetagene = derive2 { name="Imetagene"; version="1.4.0"; sha256="0h80hwa8ksqwbhrwfvqp09yzlfqncrg0s6j48h9p4rhzf8958k6p"; depends=[d3heatmap ggplot2 metagene shiny shinyBS shinyFiles shinythemes]; };
-  ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.2.0"; sha256="1nw7swi6mq2gs8qc8k8psfzfrkxcbdkmc7vz8shsiszxp5idfy8b"; depends=[Biobase data_table ggplot2 gplots gtools pheatmap RCurl reshape2 Rlabkey scales]; };
-  ImpulseDE = derive2 { name="ImpulseDE"; version="1.0.0"; sha256="0qaq5gb19zdp4z2vhmn0gm3f1ccc8939nvcmaca34w51g4l1i4c0"; depends=[amap boot]; };
-  InPAS = derive2 { name="InPAS"; version="1.6.0"; sha256="1mkp059xzx0r1a3jv59pbwnwwkcg2kyrd2amxblgd27418j3g0mp"; depends=[AnnotationDbi Biobase BiocParallel BSgenome cleanUpdTSeq depmixS4 GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges limma preprocessCore S4Vectors seqinr]; };
-  InteractionSet = derive2 { name="InteractionSet"; version="1.2.1"; sha256="0ax3qlsvm6zqfgli6dm68d1ip1cr74db8xbhs63mb6l84nni14y5"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix S4Vectors SummarizedExperiment]; };
-  IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.10.0"; sha256="17z67xxq9vs80nl69bv4n9932dvwhsvra7k2wyj4gj1mmh11v6gg"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust orQA RColorBrewer Rcpp relimp tkrplot xlsx]; };
-  JunctionSeq = derive2 { name="JunctionSeq"; version="1.4.0"; sha256="1x7ngcyhcyi5aynp2zig24rpkkmc8bc8b5f4zlfvkxq3igh8gyri"; depends=[Biobase BiocGenerics BiocParallel DESeq2 genefilter geneplotter GenomicRanges Hmisc IRanges locfit plotrix S4Vectors statmod stringr SummarizedExperiment]; };
-  KCsmart = derive2 { name="KCsmart"; version="2.32.0"; sha256="1ppvnd6rs4bwxjr6qhhz5wd4fx9r3xg2mr0zjs8y7srm3k6k2djl"; depends=[BiocGenerics KernSmooth multtest siggenes]; };
-  KEGGREST = derive2 { name="KEGGREST"; version="1.14.1"; sha256="0dcdmbkqxy0d4gg8lqlaflmjljzl9h1p2mlxnmvwgx34vnpx386y"; depends=[Biostrings httr png]; };
-  KEGGgraph = derive2 { name="KEGGgraph"; version="1.32.0"; sha256="1r5ib197swfr38ia0g23d78kx0dkgjssjmi5fc18z3nfparhkxdq"; depends=[graph XML]; };
-  KEGGlincs = derive2 { name="KEGGlincs"; version="1.0.0"; sha256="0jrfzx0s3xkk19pzm7iffk2cx6njihrclrn3iw2d3zvd015k47l3"; depends=[AnnotationDbi gtools hgu133a_db httr igraph KEGGgraph KEGGREST KOdata org_Hs_eg_db plyr RJSONIO]; };
-  KEGGprofile = derive2 { name="KEGGprofile"; version="1.16.0"; sha256="1ir3vma3n9bh8bkym0h5p2s6wbi7cjsvlz99mc34nkzqn0jxm0yl"; depends=[AnnotationDbi biomaRt KEGG_db KEGGREST png TeachingDemos XML]; };
-  LBE = derive2 { name="LBE"; version="1.42.0"; sha256="103m1j86mlqrrjzy9w5zms0hksqjbn20jqnrf83fga4z958w32fa"; depends=[]; };
-  LEA = derive2 { name="LEA"; version="1.6.0"; sha256="1ckygk393awmd963g7jykmfzcpysgi4d29psc5iqdz0h2cxrczjd"; depends=[]; };
-  LINC = derive2 { name="LINC"; version="1.2.0"; sha256="0658n1pqm9ccq0s3al7xiljysfqg06wsr0zn9hqb4bafr7amycnf"; depends=[ape Biobase clusterProfiler DOSE ggplot2 ggtree gridExtra org_Hs_eg_db png Rcpp ReactomePA reshape2 sva]; };
-  LMGene = derive2 { name="LMGene"; version="2.30.0"; sha256="07dchmzvdp2m2ky2f0vs32ch7cg2fgibmfwsw0din0rx96q0g3y9"; depends=[affy Biobase multtest survival]; };
-  LOBSTAHS = derive2 { name="LOBSTAHS"; version="1.0.0"; sha256="0cbr5124rix2lib3gscx7ci1ir4mj4dy5npmxi506804a27rs6z8"; depends=[CAMERA xcms]; };
-  LOLA = derive2 { name="LOLA"; version="1.4.0"; sha256="175k4j4yj3j95gy2h7n3yinqf95l8g2vvhpsqc0j9wrpj0wwqyix"; depends=[BiocGenerics data_table GenomicRanges IRanges S4Vectors]; };
-  LPE = derive2 { name="LPE"; version="1.48.0"; sha256="1r86lj75qk9inhslh6m6cvk4d57yqxyxssp85hci3w48axz9gnfg"; depends=[]; };
-  LPEadj = derive2 { name="LPEadj"; version="1.34.0"; sha256="0fa4cq3yph30mdlx9wk8k90hwy2plflfz2sahighl0ahx98b7mij"; depends=[LPE]; };
-  LVSmiRNA = derive2 { name="LVSmiRNA"; version="1.24.0"; sha256="102r6v36q2m03jfc65l5az4570nf3f30klkhqbsb00w0fqhmyi97"; depends=[affy Biobase BiocGenerics limma MASS quantreg SparseM vsn zlibbioc]; };
-  LedPred = derive2 { name="LedPred"; version="1.8.0"; sha256="1hi6y7h7yxw5dgj6aq2z48wf8qaxz9q5qd68m41myicwzgva7b8j"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; };
-  Linnorm = derive2 { name="Linnorm"; version="1.2.11"; sha256="07cgs6q6svkf9l9qn41702mzank6v1hm4z3isz9cdxlhz586r4cp"; depends=[amap apcluster ellipse fastcluster fpc ggdendro ggplot2 igraph limma MASS mclust Rcpp RcppArmadillo statmod vegan zoo]; };
-  LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.28.0"; sha256="1pwcdy4gp1vhdx6kgcligmr5pha5hx03yf3r0lidskcrzydk4sms"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; };
-  LowMACA = derive2 { name="LowMACA"; version="1.6.0"; sha256="07lgl3hcgdiin1r7ws5g7s0jw371v6qlzici0myjz9hw8p9p8gwf"; depends=[BiocParallel Biostrings cgdsr data_table LowMACAAnnotation motifStack RColorBrewer reshape2 stringr]; };
-  LymphoSeq = derive2 { name="LymphoSeq"; version="1.2.0"; sha256="0mi82fgkl9bn9x9mhx4zw8cg0acmqsmw22v824xd2ik6c3q017pv"; depends=[circlize data_table dplyr ggplot2 ineq LymphoSeqDB plyr RColorBrewer reshape VennDiagram]; };
-  M3D = derive2 { name="M3D"; version="1.8.2"; sha256="06hxxvbk2jpbsyksvl7blll70hg2qb1kg44yv0vaa4a12cq8a1k1"; depends=[BiocGenerics BiSeq GenomicRanges IRanges Rcpp S4Vectors SummarizedExperiment]; };
-  M3Drop = derive2 { name="M3Drop"; version="1.0.0"; sha256="0adfklx4nzsy2xvz2gngqlyda4a0avdj3yal9brdk27826s2hyqf"; depends=[bbmle gplots numDeriv RColorBrewer statmod]; };
-  MADSEQ = derive2 { name="MADSEQ"; version="1.0.0"; sha256="1m4mfrijyin27v0wxvv9p5i6zxiwkc0hmsriccs58qq9x4zi52ik"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM zlibbioc]; };
-  MAIT = derive2 { name="MAIT"; version="1.8.0"; sha256="085yih04ah4rbbzcchr6qvb69bbvbwsxbfmzd8wfvjdg9r6z3j8v"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; };
-  MANOR = derive2 { name="MANOR"; version="1.46.0"; sha256="101rdapxpvjd383mykx1l6n3h3xvh6z1q60mxwbndwfl429fypy9"; depends=[GLAD]; };
-  MAST = derive2 { name="MAST"; version="1.0.5"; sha256="1462b82alj0lbjl1zpfq8i2h3zxj38r82dvanyipg4m468ynmws7"; depends=[abind Biobase BiocGenerics data_table ggplot2 plyr reshape2 S4Vectors stringr SummarizedExperiment]; };
-  MBASED = derive2 { name="MBASED"; version="1.8.0"; sha256="0isvf0n0zy7q5vhixnijrmyhdb0zpn74ddqdczgp3j93ripnb04q"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; };
-  MBAmethyl = derive2 { name="MBAmethyl"; version="1.8.0"; sha256="0l3crgq2i263wq5l91dzbj472bp0y4khlxklikfir1793sgzhwi7"; depends=[]; };
-  MBCB = derive2 { name="MBCB"; version="1.28.0"; sha256="0n6f61w5dq1hz80s434zzn78nipi75jn8zwaisgi77kb5k2xrss9"; depends=[preprocessCore tcltk2]; };
-  MBttest = derive2 { name="MBttest"; version="1.2.0"; sha256="12yqdgw3wzmzvvfdvf8lb5lyif4cpchdk21ik2k7r7qsvfwkcqnd"; depends=[gplots gtools]; };
-  MCRestimate = derive2 { name="MCRestimate"; version="2.30.0"; sha256="0sc3grx8l97cdwxvjvbmb7a3hnqbi1f9lqd4a12n2zcwcv6xr8ly"; depends=[Biobase e1071 golubEsets pamr randomForest RColorBrewer]; };
-  MEAL = derive2 { name="MEAL"; version="1.4.2"; sha256="05gk7gs70i36xw4sxzrwlcdkbr9bprqgg0hlqwcynyl3x816s3qr"; depends=[Biobase BiocGenerics DMRcate doParallel GenomicRanges ggplot2 IRanges limma minfi MultiDataSet permute S4Vectors SNPassoc snpStats sva vegan]; };
-  MEDIPS = derive2 { name="MEDIPS"; version="1.24.0"; sha256="1gincnn8ay83rzdm3rgd8h9fgg7s1j8i8s22pn1rp073pph582yf"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; };
-  MEDME = derive2 { name="MEDME"; version="1.34.0"; sha256="1zrxd0bqayxbbgmpqj77lij58a4szsr3y064mmn4manhmij3hbml"; depends=[Biostrings drc MASS]; };
-  MEIGOR = derive2 { name="MEIGOR"; version="1.8.0"; sha256="0m4g0np2f5yab1h1j8swfhkgnl1s2a0xw5cvbg7l5pbmzs2fkxa1"; depends=[CNORode deSolve Rsolnp snowfall]; };
-  MGFM = derive2 { name="MGFM"; version="1.8.0"; sha256="0i05pcgk5axjr1piwm5g6wb7zh4hwya1zbvvrfr4v8rwilsyq27z"; depends=[annotate AnnotationDbi]; };
-  MGFR = derive2 { name="MGFR"; version="1.0.0"; sha256="0qbmndrvn19h8vnx2qhcpa175hvid1vlnzzi9177x73naj2lyyv3"; depends=[annotate biomaRt]; };
-  MIMOSA = derive2 { name="MIMOSA"; version="1.12.0"; sha256="0nzl95cnhf9d38v8gaxy2hlqgxbzzllvh71k5sa335zfr0p1lzr8"; depends=[Biobase coda data_table Formula ggplot2 Kmisc MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape scales testthat]; };
-  MLInterfaces = derive2 { name="MLInterfaces"; version="1.54.0"; sha256="1fg8l1digl14ijr53bwarbqwcaj5374vmqdkvy5jfg2s06iwdkym"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter MASS mlbench pls RColorBrewer rda rpart sfsmisc shiny threejs]; };
-  MLP = derive2 { name="MLP"; version="1.22.0"; sha256="0awiqvhzzvgqmacks3yxl4a6savc39dv6brf8m0lz9rcl6cgzsza"; depends=[affy AnnotationDbi gdata gmodels gplots gtools plotrix]; };
-  MLSeq = derive2 { name="MLSeq"; version="1.14.1"; sha256="1wdh4rpsfnv1nzypgqm4y9c4vzv9z8snrb0nh2s9ssbcc7cwkpl7"; depends=[Biobase caret DESeq2 edgeR limma randomForest]; };
-  MMDiff2 = derive2 { name="MMDiff2"; version="1.2.0"; sha256="1zy8whabpqbl1cfhh6bjax97snyy6pqfd8dqa7w21s6y4wg9krzd"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; };
-  MODA = derive2 { name="MODA"; version="1.0.0"; sha256="1fh26d0gfisif8v1ms321mj08202kfqngvghpg1xzr28cp59h9c8"; depends=[dynamicTreeCut igraph WGCNA]; };
-  MPFE = derive2 { name="MPFE"; version="1.10.0"; sha256="1d2b3mhcjxvdq99iqj96gygq9bivg95n2n7jxscy3gdkzpf70336"; depends=[]; };
-  MSGFgui = derive2 { name="MSGFgui"; version="1.8.0"; sha256="0g8pygqqxb4g5hh47n9jwikim8hakrbppn85ydzq4hvrsjysjdxz"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; };
-  MSGFplus = derive2 { name="MSGFplus"; version="1.8.0"; sha256="104h4f0jnhswn4sbr5r1ivd7g1r4gdrrjj3a0kd7p3ckl542vwcq"; depends=[mzID]; };
-  MSnID = derive2 { name="MSnID"; version="1.8.0"; sha256="0fkk3za39cxi0jyxmagmycjdslr2xf6vg3ylz14jyffqi0blw9d5"; depends=[Biobase data_table doParallel dplyr foreach iterators MSnbase mzID mzR ProtGenerics R_cache Rcpp reshape2]; };
-  MSnbase = derive2 { name="MSnbase"; version="2.0.2"; sha256="0jjjs29dcwsjaxzfqxy98ycpg3rwxzzchkj77my3cjgdc00sm66n"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant mzID mzR pcaMethods plyr preprocessCore ProtGenerics Rcpp reshape2 S4Vectors vsn XML]; };
-  MSstats = derive2 { name="MSstats"; version="3.6.0"; sha256="1p9000y7ca94vingg1gdd6sdxy3p0njqdinxhy3raf4gb4hmnv7y"; depends=[data_table ggplot2 ggrepel gplots limma lme4 marray minpack_lm MSnbase preprocessCore Rcpp reshape reshape2 survival]; };
-  MVCClass = derive2 { name="MVCClass"; version="1.48.0"; sha256="1jd2vh63j4jj0q4x05drrwfkn7qddxq96403ambkavcxcxs3z0x7"; depends=[]; };
-  MantelCorr = derive2 { name="MantelCorr"; version="1.44.0"; sha256="1r1lb71mw7fqlmfai7d2lbij3n9pjpvvng8lx0fpbzaxghrbcd37"; depends=[]; };
-  MassArray = derive2 { name="MassArray"; version="1.26.0"; sha256="152wy0h3zrfqyf444m7mcp6gvnx4q10ahj5nziwdp26k7zjm4jx9"; depends=[]; };
-  MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.40.0"; sha256="0c734mvynmyir7pcfy8igvvxk8y3hvcpkazsjljykfjvjs47x49p"; depends=[waveslim]; };
-  MatrixRider = derive2 { name="MatrixRider"; version="1.6.0"; sha256="0khdgn3kcj1mw5z8d2cz781n56myqgxalycg9317dap6r2hng11x"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; };
-  MeSHDbi = derive2 { name="MeSHDbi"; version="1.10.0"; sha256="1jyz50q4svakq8ckwnrfyc568ryhg3jxl920v7s477nxj2854pa1"; depends=[AnnotationDbi Biobase BiocGenerics RSQLite]; };
-  MeSHSim = derive2 { name="MeSHSim"; version="1.6.0"; sha256="1ab92abmyw469v4gzk6ki95j5m9ivdwr7v74hgh8jr5zw674gfzp"; depends=[RCurl XML]; };
-  MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.46.0"; sha256="046yc0bvqxxh5x83zy7qq6b5cyhzkcg78bgyzz9w7lb7sim0h491"; depends=[]; };
-  MergeMaid = derive2 { name="MergeMaid"; version="2.46.0"; sha256="07ann5kkbp0kz2cplks934yy20ixnqjz1fnhd292lbsq493www1x"; depends=[Biobase MASS survival]; };
-  Mergeomics = derive2 { name="Mergeomics"; version="1.2.0"; sha256="187w71dr1brjz6fhdlxxvanipn9rmkyfrp5ij943y3jca0iibbij"; depends=[]; };
-  MetCirc = derive2 { name="MetCirc"; version="1.0.1"; sha256="09mw5nqvp5pj8dma7fqdiiw5qqxm3m51s2r4ji3shiliq961bkw4"; depends=[amap circlize scales shiny]; };
-  Metab = derive2 { name="Metab"; version="1.8.0"; sha256="1kb41ld1fxggmwa4chzpwnfy6473jhs79386k0py9i7z9myaf7pj"; depends=[pander svDialogs xcms]; };
-  MetaboSignal = derive2 { name="MetaboSignal"; version="1.4.0"; sha256="08j76zdkzg42j3x1h5dzw7qkx44fcj7bwigrv452s6frkanhb5ij"; depends=[AnnotationDbi biomaRt hpar igraph KEGGgraph KEGGREST mygene org_Hs_eg_db RCurl]; };
-  MethPed = derive2 { name="MethPed"; version="1.2.0"; sha256="0phja8mf6vi913kjypbyx25j9bgqj25iis4jz1y7hbafvy3vx4x8"; depends=[Biobase randomForest]; };
-  MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.6.0"; sha256="15vbqsci33fbcz94va64w53qnzx4hqzv2ss4myhy9kavk4h5ma07"; depends=[Biostrings gplots seqinr stringr]; };
-  MethylAid = derive2 { name="MethylAid"; version="1.8.0"; sha256="0c2y6r72ypgc9rjyk4779l0s3x3wpdm88ygab5zdfi9sgy108r4x"; depends=[Biobase BiocGenerics BiocParallel ggplot2 gridBase hexbin matrixStats minfi RColorBrewer shiny]; };
-  MethylMix = derive2 { name="MethylMix"; version="2.0.0"; sha256="06zq28ns2h2l6zlrwhgrf80ac679fq3qbrlcn0rshwz2vwbk6xha"; depends=[data_table digest foreach ggplot2 impute limma R_matlab RColorBrewer RCurl RPMM]; };
-  MethylSeekR = derive2 { name="MethylSeekR"; version="1.14.0"; sha256="06kixgxrla3rvxf6xsg4r4yxi9qld6kx82p9xv2x978qsx717frr"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; };
-  Mfuzz = derive2 { name="Mfuzz"; version="2.34.0"; sha256="1bzi6kwpbkr8g4zqxw517grl2sc4pq6ph4m4vb4hmn6x6qxlijlr"; depends=[Biobase e1071 tkWidgets]; };
-  MiChip = derive2 { name="MiChip"; version="1.28.0"; sha256="0lxdcmfy1gpfpmnagg2649dbq9rj13rggv43n79l2f033awbpsp8"; depends=[Biobase]; };
-  MiPP = derive2 { name="MiPP"; version="1.46.0"; sha256="1280c04222l2hbapbw7k6rnsi8hrbpd0w49gvx50sl0mkl3zq5gh"; depends=[Biobase e1071 MASS]; };
-  MiRaGE = derive2 { name="MiRaGE"; version="1.16.0"; sha256="17ys0qwz8y4ka81ynzp46fcy5qi6mw7y7vsffqvgnsf587bdj9ia"; depends=[AnnotationDbi Biobase BiocGenerics S4Vectors]; };
-  MineICA = derive2 { name="MineICA"; version="1.14.0"; sha256="0si7l560d14vhz4k8p0c1fqmr85f91zcfz3vh0fbnyg3m4rh8yz2"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; };
-  MinimumDistance = derive2 { name="MinimumDistance"; version="1.18.0"; sha256="1zl8ravn0dpb6ca3f9k92p7wdhz7afjy7cx28nx0hv71aqk1q5i8"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; };
-  Mirsynergy = derive2 { name="Mirsynergy"; version="1.10.0"; sha256="1w98swg02n1gfk1cgjvzi09wwymn8v6v3gjlm58sgj0j47h8l4c6"; depends=[ggplot2 gridExtra igraph Matrix RColorBrewer reshape scales]; };
-  MmPalateMiRNA = derive2 { name="MmPalateMiRNA"; version="1.24.0"; sha256="1g6wlk8qlszc42jqrdlwa340p69h7fk7nmdrk0k0rdl1mmjsmcs9"; depends=[Biobase lattice limma statmod vsn xtable]; };
-  MoPS = derive2 { name="MoPS"; version="1.8.0"; sha256="1z0m6c61sp6cljaibskrk8xywpkgx4m3d2s8rdq3hs99x6w1f200"; depends=[Biobase]; };
-  MoonlightR = derive2 { name="MoonlightR"; version="1.0.0"; sha256="10r0vnyig561d5hrvhbb3srr6v1lndgjxabj03adhmn7nbv4iija"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; };
-  MotIV = derive2 { name="MotIV"; version="1.30.0"; sha256="1zq22llziicgfsh9ykf8blf9593h4yw3nhr58alvvp5hjjh2pz3r"; depends=[BiocGenerics Biostrings IRanges lattice rGADEM S4Vectors]; };
-  MotifDb = derive2 { name="MotifDb"; version="1.16.1"; sha256="105a320znvrdkwvsixv1ddaiax1ay87wr4675pv4j79xdjh7by2z"; depends=[BiocGenerics Biostrings IRanges rtracklayer S4Vectors]; };
-  Mulcom = derive2 { name="Mulcom"; version="1.24.0"; sha256="0mlmb9lk71676dz45812ni72vbid2hv2v9b1i437dr69qnppm126"; depends=[Biobase fields]; };
-  MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.0.1"; sha256="0vq7xfw3wv7i07v57qz2b3v599mfp27p6fxadlsqjql9v5jy6kk6"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors shiny shinydashboard SummarizedExperiment]; };
-  MultiDataSet = derive2 { name="MultiDataSet"; version="1.2.0"; sha256="04hrqi8x2fsfnpyk344kfrvfl66mv1lx3kdqs7ga9wnfq98b82b2"; depends=[Biobase BiocGenerics GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IRanges minfi S4Vectors SummarizedExperiment]; };
-  MultiMed = derive2 { name="MultiMed"; version="1.8.0"; sha256="1185flg1grb14m00km2v6z4ypl5lh6p4p05wsxq231g255aljq64"; depends=[]; };
-  MutationalPatterns = derive2 { name="MutationalPatterns"; version="1.0.0"; sha256="1a3c2bm0xx0q4gf98jiw74msmdf2fr8rbsdysd5ww9kqlzmsbr17"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges NMF plyr pracma reshape2 SummarizedExperiment VariantAnnotation]; };
-  NCIgraph = derive2 { name="NCIgraph"; version="1.22.0"; sha256="1dbbnlbbjqvmb8adppkacl7qrxic4gavvcmh0cafpvsm3ybs4zvb"; depends=[graph KEGGgraph R_methodsS3 RBGL RCytoscape]; };
-  NGScopy = derive2 { name="NGScopy"; version="1.8.0"; sha256="0hc103pa3qbd6pd4578wdrczd4sljhb408lclkjlv3abdc6x7247"; depends=[changepoint rbamtools Xmisc]; };
-  NOISeq = derive2 { name="NOISeq"; version="2.18.0"; sha256="0iw4zy01a0lk6n60q4kw3jmgha41dxchidzg9rbsbsci3ysnl3h5"; depends=[Biobase Matrix]; };
-  NTW = derive2 { name="NTW"; version="1.24.0"; sha256="0cqc8rgkx9gqhkc62csyws7c23nf94pwigiq5myirgamga314cqb"; depends=[mvtnorm]; };
-  NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.4.0"; sha256="06zln140q6r00mhi820hzgw5zincr1kg56h3387iikyw4hyq53s2"; depends=[Biobase matrixStats]; };
-  NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.6.0"; sha256="0848h8dmbk0gj4w0p77bi6byqil76ggaikqqdxflyzv39zkw28sc"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; };
-  NarrowPeaks = derive2 { name="NarrowPeaks"; version="1.18.0"; sha256="02g8rbqaddcy4w9i2ma0xmzdb84bykba3p3zmv1lylh77knmxdrw"; depends=[BiocGenerics CSAR fda GenomeInfoDb GenomicRanges ICSNP IRanges S4Vectors]; };
-  NetPathMiner = derive2 { name="NetPathMiner"; version="1.10.0"; sha256="0ssbmp0qkvnvii646zj2qiwzrn8cyi6jvg7h937vbr6vnzv643cg"; depends=[igraph]; };
-  NetSAM = derive2 { name="NetSAM"; version="1.14.0"; sha256="1jzlpnnry9lbnfvrks5fz14nwkvg3r8pp8f5lw63izg0fx1m5ypm"; depends=[graph igraph seriation]; };
-  NormqPCR = derive2 { name="NormqPCR"; version="1.20.0"; sha256="1qik5gvzvj4zzfllj5p9cryfwq8z33jziv6p5gyfndyn5b9p2sq6"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; };
-  NuPoP = derive2 { name="NuPoP"; version="1.24.0"; sha256="1aqw86yn9pq1901qzqjvjw9sfqpnnqn29pagdrxqd6858x034w6n"; depends=[]; };
-  OCplus = derive2 { name="OCplus"; version="1.48.2"; sha256="04drljh5m46v9gpvfgwgajq9kn1ycb7fhbxxk6j4xq89ddlz1dk7"; depends=[akima multtest]; };
-  OGSA = derive2 { name="OGSA"; version="1.4.0"; sha256="0i2w0g4310sg1zy4z7bc9ajr4yizf313bpzwgzjngx51hsyjk9ws"; depends=[Biobase gplots limma]; };
-  OLIN = derive2 { name="OLIN"; version="1.52.0"; sha256="1q0p8jry2nw3w1a4zan0kwgc87nk2v2psnw00m5m6m0a1j9drryd"; depends=[limma locfit marray]; };
-  OLINgui = derive2 { name="OLINgui"; version="1.48.0"; sha256="168bbsacsj74ah84zbfi7h2bpnz7zclbykl9rwaic8gr4ymgz1qw"; depends=[marray OLIN tkWidgets widgetTools]; };
-  OSAT = derive2 { name="OSAT"; version="1.22.0"; sha256="0f4lz86g8205hbbdka50a6s1gbdb19zqjna4gwakb4w3ni53gqhg"; depends=[]; };
-  OTUbase = derive2 { name="OTUbase"; version="1.24.0"; sha256="0xxha9f2f2qfzb8cv4m59grbyv011w9f27zm3cq64affgzwnb5r2"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; };
-  OmicCircos = derive2 { name="OmicCircos"; version="1.12.0"; sha256="0q6ngrf5cyy6hyvhhhrx6ldbij7b051fgdsknm7qb4xzbsk5i75k"; depends=[GenomicRanges]; };
-  OmicsMarkeR = derive2 { name="OmicsMarkeR"; version="1.8.1"; sha256="0y38441v5lnj25w3qw5d4f6bijf3c9jzxp57jjhhj12vxqmrdajy"; depends=[assertive assertive_base caret caTools data_table DiscriMiner e1071 foreach gbm glmnet pamr permute plyr randomForest]; };
-  OncoScore = derive2 { name="OncoScore"; version="1.2.1"; sha256="1f8nx3p8dik5b8yvpn7pvk5iy5vyy5fjgy49d3czkfwp1dzis49d"; depends=[biomaRt]; };
-  OncoSimulR = derive2 { name="OncoSimulR"; version="2.4.0"; sha256="0a1m54x14f6rz9sz9m1kwlxl8xl3vlxqz3iq5qrs8n36crqbx3nj"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph RColorBrewer Rcpp Rgraphviz smatr]; };
-  OperaMate = derive2 { name="OperaMate"; version="1.6.0"; sha256="152qxkf4qnkjj4grk0jsysh80daybgw6ywwm1h8l6lk64q0dhl6w"; depends=[fBasics ggplot2 gProfileR gridExtra pheatmap reshape2 stabledist]; };
-  OrderedList = derive2 { name="OrderedList"; version="1.46.0"; sha256="1wfpypaimvzisv032irbsmk766zxq1xqh8q0qn9ipqp9hrp7mrlb"; depends=[Biobase twilight]; };
-  OrganismDbi = derive2 { name="OrganismDbi"; version="1.16.0"; sha256="0pj1qfz015203dkkik49i00jlvbbzh1p4lz2jgpk2iqx8n0yx923"; depends=[AnnotationDbi Biobase BiocGenerics BiocInstaller GenomicFeatures GenomicRanges graph IRanges RBGL RSQLite S4Vectors]; };
-  Oscope = derive2 { name="Oscope"; version="1.4.0"; sha256="1cxmz482wlqvkcz9x3riwn01kz5flyzyg41ygs0flkjml64dp7hj"; depends=[BiocParallel cluster EBSeq testthat]; };
-  OutlierD = derive2 { name="OutlierD"; version="1.38.0"; sha256="10lwi35l9iv2hx7hra43i0b6n1r853rdzcbwir4m34iijjxjx9db"; depends=[Biobase quantreg]; };
-  PAA = derive2 { name="PAA"; version="1.8.0"; sha256="0kv6mxczp0mwmhyqlq2qxzzhzapl2ijmr6063aw6klsh03q1n73m"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; };
-  PADOG = derive2 { name="PADOG"; version="1.16.0"; sha256="0f0rl44sclmbcqfsw086nalhzxrjc04yml89xwgnjny4f5kh7sri"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGG_db KEGGdzPathwaysGEO limma nlme]; };
-  PANR = derive2 { name="PANR"; version="1.20.0"; sha256="0ml99gy3fi55qqj6k9hbs5hwvf51344k0anwx30hnpk1xsxvcjy0"; depends=[igraph MASS pvclust RedeR]; };
-  PAPi = derive2 { name="PAPi"; version="1.14.0"; sha256="18mnm303ryyz912m6yqnc2fbdhkin1v45jb55dxaplpzh57hmsxg"; depends=[KEGGREST svDialogs]; };
-  PAnnBuilder = derive2 { name="PAnnBuilder"; version="1.38.0"; sha256="0sws413s9gy9zkaj007wbbgkk8ghh38kzr28kmpjwviga09142zr"; depends=[AnnotationDbi Biobase DBI RSQLite]; };
-  PCAN = derive2 { name="PCAN"; version="1.2.1"; sha256="07yhqzvvmhldlvg7d2zg3shwlhnpm381rwrbfcrazhf2bgysd9kd"; depends=[BiocParallel]; };
-  PCpheno = derive2 { name="PCpheno"; version="1.36.0"; sha256="08pxms6hs82ngjh7vcjqh7m5jchznss4i7izm37dwxp1nmy83bhy"; depends=[annotate AnnotationDbi Biobase Category GO_db graph GSEABase KEGG_db ppiData ppiStats ScISI SLGI]; };
-  PECA = derive2 { name="PECA"; version="1.10.0"; sha256="1g91z0ywbm7ck9bi9a2v75hx98hvxvi1b6h8wlzv6gjjsv2z849a"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore ROTS]; };
-  PGA = derive2 { name="PGA"; version="1.4.0"; sha256="12fwd2c7psp5ffmi7z81a33ynjg0khikccp5qjyin76bvnqxx7sw"; depends=[AnnotationDbi biomaRt Biostrings customProDB data_table GenomicFeatures GenomicRanges ggplot2 IRanges Nozzle_R1 pheatmap RCurl Rsamtools RSQLite rTANDEM rtracklayer S4Vectors stringr VariantAnnotation]; };
-  PGSEA = derive2 { name="PGSEA"; version="1.48.0"; sha256="0yn1ayvf6g8g3w5lakp3224qm3h2h984zii7n7cqnzl8gciwxyb4"; depends=[annaffy AnnotationDbi Biobase GO_db KEGG_db]; };
-  PICS = derive2 { name="PICS"; version="2.18.0"; sha256="1vzsrmyk4l19z0a7i9gzmrymks3jh2c8rfib6g7kn9z5pwbw56l1"; depends=[BiocGenerics GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; };
-  PING = derive2 { name="PING"; version="2.18.0"; sha256="0rlx8dasj51xnj3nwvx4sjia7di9q3sawmz5zhp6a2kfacgss0lc"; depends=[BiocGenerics BSgenome chipseq fda GenomicRanges Gviz IRanges PICS S4Vectors]; };
-  PLPE = derive2 { name="PLPE"; version="1.34.0"; sha256="1d2m9xxhvmgjn92dv1i8x7yzam377hzj6ibb3d4rmqmbjs446cdk"; depends=[Biobase LPE MASS]; };
-  PREDA = derive2 { name="PREDA"; version="1.20.0"; sha256="07477ps2whj4h0ph5kdjra4x6jlc0xyii2yp338jhgrhdnpxwjqx"; depends=[annotate Biobase lokern multtest]; };
-  PROMISE = derive2 { name="PROMISE"; version="1.26.0"; sha256="1ybgzw043fm0lzayq4ddqwgr6j5bd3a0r73aica5bg8hzr5x1pll"; depends=[Biobase GSEABase]; };
-  PROPER = derive2 { name="PROPER"; version="1.6.0"; sha256="15xqwbn098vv0h8f0cz8nzxb5swf83idb2gd25k1vzh4nv34vr4m"; depends=[edgeR]; };
-  PROcess = derive2 { name="PROcess"; version="1.50.0"; sha256="1l0kbd0b2xarw7wc4mkvyb0ixkky7slqd3w5r41isppa4wanvvjn"; depends=[Icens]; };
-  PSEA = derive2 { name="PSEA"; version="1.8.0"; sha256="0rkf4w35xgkwa2mc5h65nf5kc61cv1p3xmyz0pg0cim8q50y5wsh"; depends=[Biobase MASS]; };
-  PSICQUIC = derive2 { name="PSICQUIC"; version="1.12.1"; sha256="1948cs1ygx16kj9kj1ip2l7k2za51zkknc1sm2n51zhl7ywk9dnv"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; };
-  PWMEnrich = derive2 { name="PWMEnrich"; version="4.10.0"; sha256="152vkwaabwsyrgh2hdkp63gac418k4yl1iwvli45ax6cv2mb1c81"; depends=[BiocGenerics Biostrings evd gdata seqLogo]; };
-  PanVizGenerator = derive2 { name="PanVizGenerator"; version="1.2.0"; sha256="09x527v5iwhnn4gn52xlk40553lzcgfwrmrc2qn9kv791rf7k743"; depends=[FindMyFriends igraph jsonlite pcaMethods shiny]; };
-  Path2PPI = derive2 { name="Path2PPI"; version="1.4.0"; sha256="0y3pz6sdrv0szi068w78kdpksxqa6dqjg3vy5sqdvj0y4sr0ss0w"; depends=[igraph]; };
-  PathNet = derive2 { name="PathNet"; version="1.14.0"; sha256="1hj9k43sb9vjryphma140g1fmqnrgj2dkcy11b0dksd9mdlldwvg"; depends=[]; };
-  PathoStat = derive2 { name="PathoStat"; version="1.0.0"; sha256="01vn24q4l7rbwksbdk0srac2rr352912bmr0brdjjfh3y9v26j8p"; depends=[alluvial ape BatchQC BiocStyle corpcor dplyr DT ggplot2 gtools knitr limma matrixStats MCMCpack pander phyloseq plyr rentrez reshape2 rmarkdown scales shiny tidyr XML]; };
-  Pbase = derive2 { name="Pbase"; version="0.14.0"; sha256="0r42974jfylqf51i00n9b1axzmqb3kv9idj6p4dz5hq223r18x1j"; depends=[Biobase BiocGenerics biomaRt Biostrings cleaver GenomicRanges Gviz IRanges MSnbase mzID mzR Pviz Rcpp rtracklayer S4Vectors]; };
-  PharmacoGx = derive2 { name="PharmacoGx"; version="1.4.3"; sha256="1cfly0xfd7sgiv65kmmb3899glvzzypb8za9prv569d7h6vz9yq8"; depends=[Biobase caTools downloader lsa magicaxis piano RColorBrewer]; };
-  PhenStat = derive2 { name="PhenStat"; version="2.8.0"; sha256="1cmpkv11s55ackgdvqmhidijznnvy1xpfhqdw3h0b11vrwi17d1a"; depends=[car logistf MASS nlme nortest]; };
-  Pi = derive2 { name="Pi"; version="1.2.1"; sha256="0b79qf119n3737n1bifnc3qb36jsyh4c9h76svqy1rpkh68pairi"; depends=[dnet GenomeInfoDb GenomicRanges ggbio ggplot2 ggrepel igraph MASS Matrix randomForest ROCR scales supraHex XGR]; };
-  Pigengene = derive2 { name="Pigengene"; version="1.0.0"; sha256="16s46alh0vm31crn3dzsf91k53v3j2hgn0rqzm1wvyw61y05la26"; depends=[bnlearn C50 GO_db graph impute MASS matrixStats partykit pheatmap preprocessCore Rgraphviz WGCNA]; };
-  Polyfit = derive2 { name="Polyfit"; version="1.8.0"; sha256="0r87xv86mivdgyifvp9snmxswsyvmsif4zkzp24wycypza7wr3l3"; depends=[DESeq]; };
-  Prize = derive2 { name="Prize"; version="1.5.1"; sha256="11rzkwrkq329g2a6wzbk9yxbjza2qihdxk9l35fd39vmdw6ykfr5"; depends=[diagram ggplot2 gplots matrixcalc reshape2 stringr]; };
-  ProCoNA = derive2 { name="ProCoNA"; version="1.12.0"; sha256="0k7nb2cq1xn64m96wjvn5g18kbpigslcf99hyv03ib7r790h32qy"; depends=[BiocGenerics flashClust GOstats MSnbase WGCNA]; };
-  Prostar = derive2 { name="Prostar"; version="1.6.1"; sha256="1gj9d425wxk57rf0qk8m9k9xxgmv02wbwjg1h4nl9q7c23vmxsbg"; depends=[DAPAR DAPARdata data_table DT rhandsontable shiny shinyAce shinyjs sm]; };
-  ProtGenerics = derive2 { name="ProtGenerics"; version="1.6.0"; sha256="0hb3vrrvfx6lcfalmjxm8dmigfmi5nba0pzjfgsrzd35c8mbfc6f"; depends=[]; };
-  ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.4.0"; sha256="0iwcsnv05g83plsb8wdgpa9lzp136pfl7qyp3yqik1fn62s32fj4"; depends=[AnnotationHub AnnotationHubData Biobase BiocInstaller Biostrings GenomeInfoDb MSnbase mzR RCurl]; };
-  PureCN = derive2 { name="PureCN"; version="1.2.3"; sha256="0h3w3d1dnr8ng0cg54jp02v1v6zhn8csrli9cpbszjgrn9dfxybx"; depends=[Biostrings data_table DNAcopy GenomeInfoDb GenomicRanges IRanges RColorBrewer Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; };
-  Pviz = derive2 { name="Pviz"; version="1.8.0"; sha256="1m2s37bzlxkih4c868wq3n8y3mg161laxh5p1789k3w32nlli89c"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; };
-  QDNAseq = derive2 { name="QDNAseq"; version="1.10.0"; sha256="0pa9r9pndk2viv7xcy961c26vx2afpc4rr7dl5zihsgb4y2az8vc"; depends=[Biobase CGHbase CGHcall DNAcopy GenomicRanges IRanges matrixStats R_utils Rsamtools]; };
-  QUALIFIER = derive2 { name="QUALIFIER"; version="1.18.0"; sha256="06aamgjl3bay76wdjzqfkwcmj9bwkvbrgv542zwqppv059an9wxf"; depends=[Biobase data_table flowCore flowViz flowWorkspace hwriter lattice latticeExtra MASS ncdfFlow reshape XML]; };
-  QUBIC = derive2 { name="QUBIC"; version="1.2.1"; sha256="15mqx8aqhk7hhhlingri1l27dydfv3vaqjvjmpa4lh7a0p9ac2rg"; depends=[biclust Matrix Rcpp RcppArmadillo]; };
-  QuartPAC = derive2 { name="QuartPAC"; version="1.6.0"; sha256="0mh2rzh3cp0n0ky133iiy1zgv1q90ilqspi4l8r5d3mqi2bs056n"; depends=[data_table GraphPAC iPAC SpacePAC]; };
-  QuasR = derive2 { name="QuasR"; version="1.14.0"; sha256="1330vlvsfypr0pl7arawks4d80yjk2afn637ivcnbhrchkmicfdv"; depends=[Biobase BiocGenerics BiocInstaller BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rsamtools rtracklayer S4Vectors ShortRead zlibbioc]; };
-  QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.2.0"; sha256="0bnnh4p7ifj9kpx29x2scy7qshnbnwr9a2bzyi5npqss6nd68fpy"; depends=[Rcpp]; };
-  R3CPET = derive2 { name="R3CPET"; version="1.6.0"; sha256="1f345ci24ff1fj5i509ar8900gf4850cc88b0h7w0wm14k76s6dk"; depends=[BiocGenerics clues clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; };
-  R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.24.0"; sha256="02s8rxcv1k41v2nzrpzhbh7l7hhyp94k61cic35kvbd84xs8bwvl"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; };
-  R4RNA = derive2 { name="R4RNA"; version="1.2.0"; sha256="0hl5khn72nid1f9863nl8wyh98xgj2zx3yp0bf7q5ja5559kqnj7"; depends=[Biostrings]; };
-  RBGL = derive2 { name="RBGL"; version="1.50.0"; sha256="1q14m8w6ih56v680kf3d9wh1qbgp7af33kz3cxafdf1vvzx9km08"; depends=[graph]; };
-  RBM = derive2 { name="RBM"; version="1.6.0"; sha256="0h0qzn1hp5g167z5r5p9b445v8nqmvzg3ixyj709zh66y93nqcwx"; depends=[limma marray]; };
-  RBioinf = derive2 { name="RBioinf"; version="1.34.0"; sha256="1q20v3h2zxxa5i655fdd6zyn3glga52mpq0dpmdrlx4yxb4pw3ms"; depends=[graph]; };
-  RCAS = derive2 { name="RCAS"; version="1.0.2"; sha256="0rim13lnh1pc5ks33x1pa63mlrn64fmmpwy7d10ypplrvn7sq75a"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg19 data_table DT genomation GenomeInfoDb GenomicFeatures GenomicRanges knitr motifRG org_Hs_eg_db plotly rmarkdown rtracklayer S4Vectors topGO]; };
-  RCASPAR = derive2 { name="RCASPAR"; version="1.20.0"; sha256="070j74bsjg3rq6bhi201r1vajcim8kzf99hpjcswq358q070ghbl"; depends=[]; };
-  RCy3 = derive2 { name="RCy3"; version="1.5.2"; sha256="1jkjg6byb5rwny0q77xmsc2gnppxcym59rcdn5kpgvd33l7jwnbn"; depends=[graph httr RCurl RJSONIO]; };
-  RCyjs = derive2 { name="RCyjs"; version="1.6.0"; sha256="1dh16hhm32hhk4nb12kw17gxpsg6513grvddialxhjzi21j2y698"; depends=[BiocGenerics BrowserViz graph httpuv igraph jsonlite Rcpp]; };
-  RCytoscape = derive2 { name="RCytoscape"; version="1.24.1"; sha256="1al8w3nz19abxxsnifgzb9myciacws79z2i2ffx29yvfhcsk2z7s"; depends=[BiocGenerics graph]; };
-  RDAVIDWebService = derive2 { name="RDAVIDWebService"; version="1.12.0"; sha256="1320ky26p0zq90qb5x2ysbzrz3ipcp04jz74r11qzivxzb1hzkrl"; depends=[Category ggplot2 GO_db GOstats graph RBGL rJava]; };
-  RDRToolbox = derive2 { name="RDRToolbox"; version="1.24.0"; sha256="1z0p6wi6l0lg8y4ffi5mnlm6hxlv3rx2wrlvzdqrv7pbg6vnv2m2"; depends=[MASS rgl]; };
-  REDseq = derive2 { name="REDseq"; version="1.20.0"; sha256="0wfmqanrjmrnj7prxvci3m5qaw8y8qqml6jwnbjn42b7qk57l8n6"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; };
-  RGSEA = derive2 { name="RGSEA"; version="1.8.0"; sha256="1fqlvshy4yp17v1cvjvgyiv23zcccrqs7l6mvapb2cs1q67bfhhx"; depends=[BiocGenerics]; };
-  RGalaxy = derive2 { name="RGalaxy"; version="1.18.0"; sha256="13r07fhas3bqmblydrc1h7r2sz1knc082iay5n8zi94x7bb5vx8b"; depends=[Biobase BiocGenerics digest optparse roxygen2 XML]; };
-  RGraph2js = derive2 { name="RGraph2js"; version="1.2.0"; sha256="0shkmaxsdj078vk2h3n80cfmibxnz50mlr55hbi6vf3awj81iy1x"; depends=[digest graph rjson whisker]; };
-  RIPSeeker = derive2 { name="RIPSeeker"; version="1.14.0"; sha256="1yvn9d4psifkipv1mp42qi5h09a5023cbf7mhw6nmyqpkcw4bwjd"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; };
-  RImmPort = derive2 { name="RImmPort"; version="1.2.0"; sha256="0pl2zd9y2skhxp1clnv0y7dyi4ib2pj5a6rbq9f0nqjcwqc251h0"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; };
-  RLMM = derive2 { name="RLMM"; version="1.36.0"; sha256="0h7k448ajdpvqbq5vi0lx38sc581hv74224fi0grdrk9s56n3993"; depends=[MASS]; };
-  RMassBank = derive2 { name="RMassBank"; version="2.2.1"; sha256="1jkn5y8bwic6nmcd9jhs8i5kfwmldxfylapassrmzjbfg7jil4gm"; depends=[Biobase digest MSnbase mzR rcdk Rcpp RCurl rjson S4Vectors XML yaml]; };
-  RNASeqPower = derive2 { name="RNASeqPower"; version="1.14.0"; sha256="1yzd5z1dbav72w1df0z93810ym09hbmghwikkv7b8y0b2blkigcy"; depends=[]; };
-  RNAinteract = derive2 { name="RNAinteract"; version="1.22.0"; sha256="0nlz20hwyrycya82wdkaj962q1zpgncf4sjawiczz7wagll61rsm"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; };
-  RNAither = derive2 { name="RNAither"; version="2.22.0"; sha256="0saq1yichxgr12wcb2d6xd5qixxisk992drza82gv31c1sq8i5vx"; depends=[biomaRt car geneplotter limma prada RankProd splots topGO]; };
-  RNAprobR = derive2 { name="RNAprobR"; version="1.6.0"; sha256="1j6mrih9aqcy3d9xh05aj1p3a39ivnj0k6i482ax1l4cq7gvna7x"; depends=[BiocGenerics Biostrings GenomicAlignments GenomicFeatures GenomicRanges plyr Rsamtools rtracklayer]; };
-  ROC = derive2 { name="ROC"; version="1.50.0"; sha256="0bm9vp0viyjr4xcar2b5dl0fbpy9fmnkrg0hzvhillrlh0xzzhwk"; depends=[]; };
-  ROTS = derive2 { name="ROTS"; version="1.2.0"; sha256="1grfw0bxb5fv4sy9xbwa8ydppr6g77qw8q9rminjnfqdafpqkakk"; depends=[Biobase Rcpp]; };
-  ROntoTools = derive2 { name="ROntoTools"; version="2.2.0"; sha256="0lq5al7g4r58wc0byyj2a49m9dcj1llcys9hdwlns1ahzvw6d76h"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; };
-  RPA = derive2 { name="RPA"; version="1.30.0"; sha256="0dq6g94jb6zam5fb667finkdn6mavvi5dnxws4dgvjw1qrlwg7vl"; depends=[affy BiocGenerics phyloseq]; };
-  RRHO = derive2 { name="RRHO"; version="1.14.0"; sha256="0iwg3hjxc9avm8mysrx0ix03ncwik0iikph9j6jgd7y7dczq3y1j"; depends=[VennDiagram]; };
-  RSVSim = derive2 { name="RSVSim"; version="1.14.0"; sha256="123fly20prx0g8bjbgqwfwrh73xjrq4xbl45rsp9q84kgi6w07i3"; depends=[Biostrings GenomicRanges IRanges ShortRead]; };
-  RTCA = derive2 { name="RTCA"; version="1.26.0"; sha256="07kb4zh14g2lvqyicmig29wn50i4sz8bcxg4vq74019al2xj7fsv"; depends=[Biobase gtools RColorBrewer]; };
-  RTCGA = derive2 { name="RTCGA"; version="1.4.0"; sha256="0y8d0y043n0ragn1saz0rw5lbx6g04ara7iggn4df5w5xzg6rm08"; depends=[assertthat data_table dplyr ggplot2 ggthemes knitr purrr rvest scales stringi survival survminer viridis XML xml2]; };
-  RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.4.0"; sha256="16p872nl9470f7yksdy73n5kwn4mlgsfjkndjg50z59sbbhc7h68"; depends=[data_table limma RCircos RCurl RJSONIO survival XML]; };
-  RTN = derive2 { name="RTN"; version="1.12.0"; sha256="19rsyr07hq17jah063w74dck9c0yjn6s2i73afawbdjpcqzcrz1n"; depends=[car data_table ff igraph IRanges limma minet RedeR snow]; };
-  RTopper = derive2 { name="RTopper"; version="1.20.0"; sha256="11vqgq594z3di5pa89irrnaiynxmi332g6d35za0glhpba3bj5bz"; depends=[Biobase limma multtest]; };
-  RUVSeq = derive2 { name="RUVSeq"; version="1.8.0"; sha256="043dmg1ggfvkn8vjaz4k9qvkjrc4ncm4p74iarh02mk0pzx5m9f9"; depends=[Biobase EDASeq edgeR MASS]; };
-  RUVcorr = derive2 { name="RUVcorr"; version="1.6.0"; sha256="13c9l874qlikk5qi8qbfdy9q749xsknf9rl7pz46n03j74afad86"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; };
-  RUVnormalize = derive2 { name="RUVnormalize"; version="1.8.0"; sha256="1hsw0y9s2890z6vim5xjp95p3gdxcy1x2paw276rrgwbz1xda1p1"; depends=[Biobase RUVnormalizeData]; };
-  RamiGO = derive2 { name="RamiGO"; version="1.20.0"; sha256="0a61368vzjljqwk3zvd92fb8h6hgr1baiww28531kqadjf83f8nr"; depends=[graph gsubfn igraph png RCurl RCytoscape]; };
-  RankProd = derive2 { name="RankProd"; version="3.0.0"; sha256="02k3977y55qph3jx86q4s4dkhndfsbcqq2xgk4xn1nglr64z4azv"; depends=[gmp Rmpfr]; };
-  RareVariantVis = derive2 { name="RareVariantVis"; version="1.8.0"; sha256="1irnj6331sr6387k922x6548pk7727vwlzy15awjxcrqlzi5jmim"; depends=[BiocGenerics GenomeInfoDb GenomicRanges googleVis IRanges S4Vectors VariantAnnotation]; };
-  Rariant = derive2 { name="Rariant"; version="1.10.0"; sha256="1sl9wxdkhac2s5sp93mavpxdmif6pkmki95xm1ci8rhms7jg66xr"; depends=[dplyr exomeCopy GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges reshape2 Rsamtools S4Vectors shiny SomaticSignatures VariantAnnotation VGAM]; };
-  RbcBook1 = derive2 { name="RbcBook1"; version="1.42.0"; sha256="1plcslp68xmr0727wj9v82yyc7lf4n76ixnh6k9lnrrs1ayzz2i9"; depends=[Biobase graph rpart]; };
-  Rbowtie = derive2 { name="Rbowtie"; version="1.14.0"; sha256="11sl03ljkq7hkm6ilw91bh4p2lz6iw35xn0f5fyh37i0j5nrmikh"; depends=[]; };
-  Rcade = derive2 { name="Rcade"; version="1.16.0"; sha256="05jg13qmrg11d9gkm76d2c3drlzk5l7ld7c57f5fysakg49qbxsd"; depends=[baySeq GenomeInfoDb GenomicAlignments GenomicRanges IRanges plotrix rgl Rsamtools S4Vectors]; };
-  Rchemcpp = derive2 { name="Rchemcpp"; version="2.12.0"; sha256="140hwsb7b0cdps5vzjjv4hjcli58g1mkbapxkd8692hjd6ncvpsj"; depends=[ChemmineR Rcpp]; };
-  RchyOptimyx = derive2 { name="RchyOptimyx"; version="2.14.0"; sha256="0w4gzcml89ww8br6xqc903ygbkmzfl5xq13k4lngcbis7b7xmxpj"; depends=[flowType graph Rgraphviz sfsmisc]; };
-  Rcpi = derive2 { name="Rcpi"; version="1.10.6"; sha256="0cqy9fr1dg85fwgkilyflwarqs0dp98xrx78xzysh0nckwbqj6mz"; depends=[Biostrings ChemmineR doParallel fmcsR foreach GOSemSim rcdk RCurl rjson]; };
-  Rdisop = derive2 { name="Rdisop"; version="1.34.0"; sha256="0fvwv7mm771wa86by3clbrx9sh7hflp1kmcyjj3xnbilwyyglvsg"; depends=[Rcpp RcppClassic]; };
-  ReQON = derive2 { name="ReQON"; version="1.20.0"; sha256="1bg7y50zh6zd6v8pmvzdzpd51nazl7ymdx57ydc5ngai372g6s0j"; depends=[rJava Rsamtools seqbias]; };
-  ReactomePA = derive2 { name="ReactomePA"; version="1.18.1"; sha256="033cq1pjd03h543abz35mz6vdcxk9ai879b2f8jxppbrmhyi3jij"; depends=[AnnotationDbi DOSE graphite igraph reactome_db]; };
-  ReadqPCR = derive2 { name="ReadqPCR"; version="1.20.0"; sha256="0rh42d2wskcmwx81266gb9npgl2gcfxsslz2drd74yvr19vc9wg2"; depends=[affy Biobase]; };
-  RedeR = derive2 { name="RedeR"; version="1.22.0"; sha256="0si80xqv3sgyjflrc4h8sq4babcd5pqr2h87a3vbmiry9daw6q2d"; depends=[igraph pvclust RCurl XML]; };
-  RefNet = derive2 { name="RefNet"; version="1.10.1"; sha256="0ssb5lhzqwgn9zahhnyk3cqbqdk0qv46819iclz2zd3na6qpkg27"; depends=[AnnotationHub BiocGenerics IRanges PSICQUIC RCurl shiny]; };
-  RefPlus = derive2 { name="RefPlus"; version="1.44.0"; sha256="0zai3s27xlqjjwvz4da5mq67yll4a4l8a6jyps6m9f6dw1q2c5jl"; depends=[affy affyPLM Biobase preprocessCore]; };
-  Repitools = derive2 { name="Repitools"; version="1.20.0"; sha256="05y2y7v768mir3r8c53w1qm9dhpy46fqbyhwakpjaiha1h8y6gxn"; depends=[aroma_affymetrix BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Ringo Rsamtools Rsolnp rtracklayer S4Vectors]; };
-  ReportingTools = derive2 { name="ReportingTools"; version="2.14.0"; sha256="02q90prc115wbhk1851gsbv4xxd39xzbav9c9vck6qirbiangj5g"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; };
-  Rgraphviz = derive2 { name="Rgraphviz"; version="2.18.0"; sha256="08brd7cmhxmbv43cf3pq0282fwyxc6hmx3y5dr7filzdb0qs8ja1"; depends=[graph]; };
-  Rhtslib = derive2 { name="Rhtslib"; version="1.6.0"; sha256="1vk3ng61dhi3pbia1lp3gl3mlr3i1vb2lkq83qb53i9dzz128wh9"; depends=[zlibbioc]; };
-  RiboProfiling = derive2 { name="RiboProfiling"; version="1.4.1"; sha256="19ndx2xdvj57r9wsz9ym3ywilib18cbpm4dswzrhdgjliw73kdjs"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; };
-  Ringo = derive2 { name="Ringo"; version="1.38.0"; sha256="0c6h7lm6aqs7y57w2h36g4yr7wl2h9yrp60vv4128bdxgjqkv539"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; };
-  Risa = derive2 { name="Risa"; version="1.16.0"; sha256="1iix9nrn0p7vvv138qxdnz9aqcicrd97hn1sfgm8n46dcn5ghmqy"; depends=[affy Biobase biocViews Rcpp xcms]; };
-  Rmagpie = derive2 { name="Rmagpie"; version="1.30.0"; sha256="00bv93d861finxi38pqbrypjiz1hsazzjrbihy4q5sfy2162xpa5"; depends=[Biobase e1071 kernlab pamr]; };
-  RmiR = derive2 { name="RmiR"; version="1.30.0"; sha256="0j0h6ififbdbc4k99k0fq5pvaig4dm0gndzbglqrl2xl77ykhpyr"; depends=[DBI RmiR_Hs_miRNA RSVGTipsDevice]; };
-  RnBeads = derive2 { name="RnBeads"; version="1.6.1"; sha256="1kjxxbhm9f519sbldmklp7nizf71wq6vbnhkad23y4j05ywlywmf"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr RColorBrewer S4Vectors]; };
-  RnaSeqSampleSize = derive2 { name="RnaSeqSampleSize"; version="1.6.0"; sha256="1lyvhkli4xdhshh53dg2xl9cyy11913zm3pnfpbfha1b0cl5w7d6"; depends=[biomaRt edgeR heatmap3 KEGGREST matlab Rcpp RnaSeqSampleSizeData]; };
-  Rnits = derive2 { name="Rnits"; version="1.8.0"; sha256="0dna0gv4f4ws0xwx5ikaqvn9x01yzln1ihrdc5886bnwmlrxwqm7"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; };
-  Roleswitch = derive2 { name="Roleswitch"; version="1.12.0"; sha256="13db86wfzw6bixjxk77d0syzazvy11x5khij2yda5py45cc6q042"; depends=[Biobase biomaRt Biostrings DBI microRNA plotrix pracma reshape]; };
-  RpsiXML = derive2 { name="RpsiXML"; version="2.16.0"; sha256="14wlw9cmjr6iv6zydw4l7bfg9dicgb3zk7qfnrlqd9060kgqbfv2"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; };
-  Rqc = derive2 { name="Rqc"; version="1.8.0"; sha256="1h3fqmkifr2bdcql161dssfbabkn4x5wg753wbg1j9lfsgn2zp96"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase digest GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; };
-  Rsamtools = derive2 { name="Rsamtools"; version="1.26.2"; sha256="118nsajgghi4cy3h0wi7777kc70a5j1fdyxv5n1dy01glix2z4qk"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges S4Vectors XVector zlibbioc]; };
-  Rsubread = derive2 { name="Rsubread"; version="1.24.2"; sha256="14v255j1n01gl1s0d13rag6m4nmpc2gg636hy4mn505bnvqp147y"; depends=[]; };
-  Rtreemix = derive2 { name="Rtreemix"; version="1.36.0"; sha256="18a6pf517an68n5bxxrnql2qzm5jmmi0k3zaqg3n6zkmfz6izm48"; depends=[Biobase graph Hmisc]; };
-  S4Vectors = derive2 { name="S4Vectors"; version="0.12.2"; sha256="0syx0qgipx97zsp3b8afhzamsr30835a2a99yb9wnq7b50g3v3p1"; depends=[BiocGenerics]; };
-  SAGx = derive2 { name="SAGx"; version="1.48.0"; sha256="1sy7r5nnp9lq8r9217zfy8g5vzjcsh4raiwd06dk4qgshqwd091b"; depends=[Biobase multtest]; };
-  SANTA = derive2 { name="SANTA"; version="2.12.0"; sha256="19xrjv25y780jlgl0fw0hlvwdnnjkr6ql769y86qnmj5ipqmgici"; depends=[igraph Matrix snow]; };
-  SBMLR = derive2 { name="SBMLR"; version="1.70.0"; sha256="0g1wzx18sac73mwn1v1jgvdx8kbbc2ijrc8nq45h64hg00w66zys"; depends=[deSolve XML]; };
-  SC3 = derive2 { name="SC3"; version="1.3.18"; sha256="1nqrzwgb55353q9gf4lky55sda6vggq5rfnmfs0g66vld6ghs6ag"; depends=[cluster doParallel doRNG e1071 foreach ggplot2 pheatmap Rcpp RcppArmadillo robustbase ROCR rrcov scater shiny WriteXLS]; };
-  SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.16.0"; sha256="04pfbmhnn6y842i7hd210qqqdkk1q2x25y34x6bnxvfvs5adg4nm"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; };
-  SELEX = derive2 { name="SELEX"; version="1.6.0"; sha256="0j8jqfxynh22r1b4cb2l0chq93i8r5izf40bfbmyxcyw56hbp9y7"; depends=[Biostrings rJava]; };
-  SEPA = derive2 { name="SEPA"; version="1.4.0"; sha256="0qrlirs7y6b4f86n9xzk29c1mpq32rjzmz22rl3dgqfanm0rhazy"; depends=[ggplot2 org_Hs_eg_db org_Mm_eg_db reshape2 segmented shiny topGO]; };
-  SGSeq = derive2 { name="SGSeq"; version="1.8.1"; sha256="13rv6dwf7bmd2asd16kg3cvpw3zfbnx4z8xh3sficzr409r4xj5v"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; };
-  SICtools = derive2 { name="SICtools"; version="1.4.0"; sha256="14crfai0zy3yc74g755hvxpm0r942k6a38sgx399bybxwnlbqdd7"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; };
-  SIM = derive2 { name="SIM"; version="1.44.0"; sha256="1f37dc843ir2jy9998gmniydc8ypqnmp68f975vkyqicbzfplh83"; depends=[globaltest quantreg quantsmooth]; };
-  SIMAT = derive2 { name="SIMAT"; version="1.6.1"; sha256="14masfdaqbsfwi1yh9cqb2cs4b47a3sy159iig5ahlbc4x9mkmvq"; depends=[ggplot2 mzR Rcpp reshape2]; };
-  SIMLR = derive2 { name="SIMLR"; version="1.0.1"; sha256="1r5yzjmjgv1lvw4b4863zs6h54614shp2bvic439wdaqr8pcq6dk"; depends=[Matrix]; };
-  SISPA = derive2 { name="SISPA"; version="1.4.0"; sha256="1rfk3gyz5h1qz333cjim6952h01x15gl067jil6i4kislkpjlza7"; depends=[changepoint data_table genefilter ggplot2 GSVA plyr]; };
-  SLGI = derive2 { name="SLGI"; version="1.34.0"; sha256="0080vwdh43i61xsii3kr517z24606dg1l412q0pg4z68p57cqrg1"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice ScISI]; };
-  SLqPCR = derive2 { name="SLqPCR"; version="1.40.0"; sha256="1zqdmq461mcz0ic9m5l4y12jmp5vf4b6w19icj2l18s9ndb2b12v"; depends=[]; };
-  SMAP = derive2 { name="SMAP"; version="1.38.0"; sha256="0qpllwng8xgx6vfg8a6vrz2353b45xhbmv8vqx81z4b0jh1knbav"; depends=[]; };
-  SMITE = derive2 { name="SMITE"; version="1.2.0"; sha256="1xqidcmr1p1nmmrhpdhbclxzfqcs33l1q8zpqs2qcbpx4svvjafb"; depends=[AnnotationDbi Biobase BioNet geneLenDataBase GenomicRanges ggplot2 goseq Hmisc igraph IRanges KEGG_db org_Hs_eg_db plyr reactome_db S4Vectors scales]; };
-  SNAGEE = derive2 { name="SNAGEE"; version="1.14.0"; sha256="1qpvqxwh14iqw5w9sx366ri9h5q3fbq2cvk0brhsq9hslccb480m"; depends=[SNAGEEdata]; };
-  SNPRelate = derive2 { name="SNPRelate"; version="1.8.0"; sha256="07ml3kwpz272q40k4qynj5farwr17lwarwclsd642s2vg0xandd6"; depends=[gdsfmt]; };
-  SNPchip = derive2 { name="SNPchip"; version="2.20.0"; sha256="036k1la7ji9fgni0mgrz3bivkh2r66xzqd3q0hys4hr6bg7xrywi"; depends=[Biobase foreach GenomeInfoDb GenomicRanges IRanges lattice oligoClasses S4Vectors SummarizedExperiment]; };
-  SNPediaR = derive2 { name="SNPediaR"; version="1.0.0"; sha256="0cbw37jdmv9bvaclvnj3wyn4r05bbyab6gr0q5gapkzz7zvg8rj1"; depends=[jsonlite RCurl]; };
-  SNPhood = derive2 { name="SNPhood"; version="1.4.1"; sha256="17miqrv6v0n6nlrn8rkblqzsf6vk5gspmban8drbjc0j13fjpmli"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; };
-  SPEM = derive2 { name="SPEM"; version="1.14.0"; sha256="1pik7sd9gg9hq3yapvc046cjcm6braq2q6nfbc2fv360xsm43ahm"; depends=[Biobase Rsolnp]; };
-  SPIA = derive2 { name="SPIA"; version="2.26.0"; sha256="0z5d3bdzixams0nv6z3yr6c8cgymv2wzbnkvg6r1xfi86mrqh0s0"; depends=[KEGGgraph]; };
-  SPLINTER = derive2 { name="SPLINTER"; version="1.0.0"; sha256="0w8082mnb8zkbkrp09hcwvn7y63y9p26slx2hvjxh07zw2h2k73c"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz IRanges plyr S4Vectors seqLogo]; };
-  SQUADD = derive2 { name="SQUADD"; version="1.24.0"; sha256="1l7rkmqw571wjwcr2wh3d2q652jpcba2hgf8nfbhc1h7da0yz5n5"; depends=[RColorBrewer]; };
-  SRAdb = derive2 { name="SRAdb"; version="1.32.0"; sha256="168ijnvv3yhh9j5wbp5m4bqns63dhnmqm108pjdfwxjm2ya0dvra"; depends=[GEOquery graph RCurl RSQLite]; };
-  SRGnet = derive2 { name="SRGnet"; version="1.0.0"; sha256="02y7w06j6qjvf49k8a4k03djahv934h4npj18hj10a4941d8ixfn"; depends=[DMwR EBcoexpress gbm gRain igraph limma MASS matrixStats pvclust RedeR]; };
-  SSPA = derive2 { name="SSPA"; version="2.14.0"; sha256="0l95hws5c4gb8c1jsqpnwc3010gx9l8yi132svxa6wbms73qpfy2"; depends=[lattice limma qvalue]; };
-  STAN = derive2 { name="STAN"; version="2.2.0"; sha256="0z5b22rqyk15gpqhlafq15gaa5h9cs0v1pm64j12qww41nrd6sz0"; depends=[BiocGenerics GenomeInfoDb GenomicRanges Gviz IRanges poilog Rsolnp S4Vectors]; };
-  STATegRa = derive2 { name="STATegRa"; version="1.8.0"; sha256="1qn3gdz23a23i1mm006z1s58j8ky5ik3zy67bc6ji6yv0pqcdmah"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; };
-  STRINGdb = derive2 { name="STRINGdb"; version="1.14.0"; sha256="17mliwk1cd67bd485j5g8wp1ch8z4mvap44ikvxa4pv51jqrqvh0"; depends=[gplots hash igraph plotrix plyr png RColorBrewer RCurl sqldf]; };
-  SVAPLSseq = derive2 { name="SVAPLSseq"; version="1.0.0"; sha256="17f0a3h82yh9lsanq17prkrbs094bc4kgj9vy6hjk0ivlh0mb0wm"; depends=[edgeR ggplot2 limma lmtest pls SummarizedExperiment]; };
-  SVM2CRM = derive2 { name="SVM2CRM"; version="1.6.0"; sha256="02k95x5ifdbnr2jwkppq94q5xbpfxvix8dnqfnjjzxni2qqgwzs3"; depends=[AnnotationDbi GenomicRanges IRanges LiblineaR mclust pls ROCR rtracklayer squash SVM2CRMdata verification zoo]; };
-  SWATH2stats = derive2 { name="SWATH2stats"; version="1.4.1"; sha256="0jnryq56yjnp7blp9hiw45w03k7g7bb08frxqv98a2zz93vqrcxd"; depends=[data_table ggplot2 reshape2]; };
-  SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.28.0"; sha256="08yyvidwzn3ijj0p339nbd94ix4f96141sa1y175cv13rfpcapdw"; depends=[]; };
-  ScISI = derive2 { name="ScISI"; version="1.46.0"; sha256="0hrm72dkn8xn5ipw7q1vixybxhc5w13d1g42k6g7ds94mgm4y7lk"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; };
-  SemDist = derive2 { name="SemDist"; version="1.8.0"; sha256="1a7f3md15a5fb9s483wz2mhhi99jhmbix9vwa44rnkd3c6xahvyz"; depends=[annotate AnnotationDbi GO_db]; };
-  SeqArray = derive2 { name="SeqArray"; version="1.14.1"; sha256="05s7iq3pbn3cpfqr5jvk4fxmvqcgray1d0yvk1j2d2fs6jmdsj97"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment VariantAnnotation]; };
-  SeqGSEA = derive2 { name="SeqGSEA"; version="1.14.0"; sha256="03g7pzhw7xz7iwac9d8lw1z0d5hxz982b65ydjwnfq87psssklx4"; depends=[Biobase biomaRt DESeq doParallel]; };
-  SeqVarTools = derive2 { name="SeqVarTools"; version="1.12.0"; sha256="1y9bdprh3iw8m5mcys5w6cvi4msh5m2291mnh81gchypk4wmpcgi"; depends=[Biobase gdsfmt GenomicRanges GWASExactHW IRanges logistf S4Vectors SeqArray stringr VariantAnnotation]; };
-  ShortRead = derive2 { name="ShortRead"; version="1.32.1"; sha256="1m7lbfxs7xwcy9xs76zy5rky2mb96anvh457xfw60lh3kygwfpxc"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rsamtools S4Vectors XVector zlibbioc]; };
-  SigCheck = derive2 { name="SigCheck"; version="2.6.0"; sha256="0ddq2q47g6anz3y3p25p5vp2nkr4ib3slyd1z5q86gaa6rja9zsv"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; };
-  SigFuge = derive2 { name="SigFuge"; version="1.12.0"; sha256="0cqdzpim9la30fdcn2kk1jb8yj27hx22szlmj86jadv21wrjspwz"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; };
-  SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.12.0"; sha256="02rcz4h0agqm4xp5p6w3i7ssyjj9l52hg9rzp2pig854nmbyyhay"; depends=[Biobase limma mclust Ringo]; };
-  SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.10.0"; sha256="14y7ija2c1qby4gb4p9jm1dgn6d1175nlm1cwpvisi8nrri3bfzq"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; };
-  SpacePAC = derive2 { name="SpacePAC"; version="1.12.0"; sha256="0xawxv7a59b9w4ggn2ifgwbmxslwp9f4cvkx1mafllj8m9wg8m2q"; depends=[iPAC]; };
-  SpeCond = derive2 { name="SpeCond"; version="1.28.0"; sha256="1paj6xpab9gv77fa5p6ndddsc0w9wqd59xkyvaarwka4c74i3983"; depends=[Biobase fields hwriter mclust RColorBrewer]; };
-  SpidermiR = derive2 { name="SpidermiR"; version="1.4.8"; sha256="1nqakgccxz5112sfj89jw5mc530kxw5lspsrnhma3sb5ivv89291"; depends=[AnnotationDbi ggplot2 gplots gridExtra httr igraph lattice latticeExtra miRNAtap miRNAtap_db networkD3 org_Hs_eg_db TCGAbiolinks visNetwork]; };
-  SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.14.0"; sha256="00cgvkh5g16i2kbdlhafpjwfszcki7g5ipl7lpkrvrzk3f9701h7"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; };
-  StarBioTrek = derive2 { name="StarBioTrek"; version="1.0.3"; sha256="0al6l12msrgh6hv73xhqvsqnm1yyvkv34g23dazwf52lxm3qvlkn"; depends=[AnnotationDbi e1071 igraph KEGGREST org_Hs_eg_db ROCR SpidermiR]; };
-  Starr = derive2 { name="Starr"; version="1.30.0"; sha256="1wq7166k8incddgivrvijyzq7xd65bwl7rlqxc4c34g7fwzmh0hc"; depends=[affxparser affy MASS pspline Ringo zlibbioc]; };
-  Streamer = derive2 { name="Streamer"; version="1.20.0"; sha256="00vi6wh4gq6x5yrvqs2gxmy0nbcjdhiwxzi1v2v99ax11p69h37m"; depends=[BiocGenerics graph RBGL]; };
-  SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.4.0"; sha256="1kbj8sg2ik9f8d6g95wz0py62jldg01qy5rsdpg1cxw95nf7dzi3"; depends=[Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix S4Vectors]; };
-  Sushi = derive2 { name="Sushi"; version="1.12.0"; sha256="05cl27h76kvxvsbc70gkma3rv9xnavg9iqm7wncardc2b8jprsk1"; depends=[biomaRt zoo]; };
-  SwathXtend = derive2 { name="SwathXtend"; version="1.2.0"; sha256="0r7cmiqmp8pkzzr3hbp8k2wk4gzikxp46bxz90dbxaxhasl0b8i0"; depends=[e1071 lattice openxlsx VennDiagram]; };
-  SwimR = derive2 { name="SwimR"; version="1.12.0"; sha256="1mmj7sf1j5414gq5ng0s74xkx0cp93l7js0whnw5bvpp43d2f2iv"; depends=[gplots heatmap_plus R2HTML signal]; };
-  TCC = derive2 { name="TCC"; version="1.14.0"; sha256="09kyj1wfpkc0iphd5iml3nh2mxr3dkzs52bbqsn259pc82p8bhxb"; depends=[baySeq DESeq DESeq2 edgeR ROC samr]; };
-  TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.2.10"; sha256="0cmv0ca3y3nc15na55j4684c2q2g2z64cpfnlxkxkgmd4djkxxwv"; depends=[affy Biobase biomaRt c3net circlize clusterProfiler ComplexHeatmap ConsensusClusterPlus data_table dnet doParallel downloader dplyr EDASeq edgeR genefilter GenomicRanges ggplot2 ggrepel ggthemes gplots gridExtra httr igraph IRanges jsonlite knitr limma matlab minet parmigene pathview plyr R_utils RColorBrewer readr rvest S4Vectors scales selectr stringr SummarizedExperiment supraHex survival survminer tibble XML xml2 xtable]; };
-  TDARACNE = derive2 { name="TDARACNE"; version="1.24.0"; sha256="06zvmrdg1rjns750w6mlx817r9fn1nkb75qd4qhcvyz6iagpdh54"; depends=[Biobase GenKern Rgraphviz]; };
-  TEQC = derive2 { name="TEQC"; version="3.14.0"; sha256="0a85r0skfjqmqs25lgarghzlq3fqp6gcyi5dzm7s3kn0kin0y8cf"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; };
-  TFBSTools = derive2 { name="TFBSTools"; version="1.12.2"; sha256="0r3rgxprc61gmvc636bybw1hqf8li2h52ch54c4jp3ach0bmyjcf"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; };
-  TIN = derive2 { name="TIN"; version="1.6.0"; sha256="18y6786wdpq9q4cvxqw0fs01hckgfhqhglpz8sb1hh044i6i00n0"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; };
-  TPP = derive2 { name="TPP"; version="3.0.3"; sha256="1l0qyjwqcn5hj1820pmxfrfb0c0i226jdpbamx4kmszy5rc3b5yv"; depends=[Biobase doParallel dplyr foreach ggplot2 gridExtra knitr limma magrittr MASS nls2 openxlsx plyr RColorBrewer RCurl reshape2 rmarkdown sme tidyr VennDiagram VGAM]; };
-  TRONCO = derive2 { name="TRONCO"; version="2.6.1"; sha256="1hwyac9jrivcl4h4k5fv54ywlf2aicd4hkr44v0mz5wgbdy1glgg"; depends=[bnlearn cgdsr circlize doParallel foreach gRapHD gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; };
-  TSCAN = derive2 { name="TSCAN"; version="1.12.0"; sha256="0zcmm7rwhc85fb5b271mdlynplsh0qdbyaw6h6fnwl8w1rdxfa6d"; depends=[combinat fastICA ggplot2 gplots igraph mclust mgcv plyr shiny]; };
-  TSSi = derive2 { name="TSSi"; version="1.20.0"; sha256="0f7xpd4lmv13297klvrskmiwszxl0i980vvg8ba5k9kd60qjk811"; depends=[Biobase BiocGenerics Hmisc IRanges minqa plyr S4Vectors]; };
-  TVTB = derive2 { name="TVTB"; version="1.0.2"; sha256="1v3vcyh8sqv7bn06zzndppdpb8vvwm6jgsv0xz9yfx2lnasgbw3v"; depends=[BiocGenerics BiocParallel Biostrings ensembldb ensemblVEP GenomeInfoDb GenomicRanges ggplot2 IRanges reshape2 Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; };
-  TarSeqQC = derive2 { name="TarSeqQC"; version="1.4.1"; sha256="1x57wd2cdfw1qrsqqm6v4flzwzkq1rkq58k214nqmi602sv66nlf"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 Hmisc IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; };
-  TargetScore = derive2 { name="TargetScore"; version="1.12.0"; sha256="0mj25y82nvlk5sk9d2dh0p96i2bzrh0xl3cjsyxz0r7n2vyzlrl2"; depends=[Matrix pracma]; };
-  TargetSearch = derive2 { name="TargetSearch"; version="1.30.0"; sha256="1z7sf0qmq3fcpf9h569f4qd4647p1rl4372w9ch8ykyjc8md7gs0"; depends=[ncdf4]; };
-  TitanCNA = derive2 { name="TitanCNA"; version="1.12.0"; sha256="1bi6gx9k3f13zjq1pp79ixzalvql5bjlmb8fb5schghb99yx82m5"; depends=[foreach GenomeInfoDb GenomicRanges IRanges Rsamtools]; };
-  ToPASeq = derive2 { name="ToPASeq"; version="1.8.0"; sha256="1b65f3jak7yqlfwwzcld41s40x0p1cfyc2lklvc9ngz8g12hql8z"; depends=[AnnotationDbi Biobase clipper DESeq DESeq2 doParallel edgeR fields graph graphite gRbase KEGGgraph limma locfit qpgraph R_utils RBGL Rcpp Rgraphviz SummarizedExperiment TeachingDemos]; };
-  TransView = derive2 { name="TransView"; version="1.18.0"; sha256="0hnk5msxpb8734djy07cgkgcf4wkkfcdcvg14a44drxdiahsijyk"; depends=[BiocGenerics GenomicRanges gplots IRanges Rsamtools S4Vectors zlibbioc]; };
-  TurboNorm = derive2 { name="TurboNorm"; version="1.22.0"; sha256="06bs841mfspzsjhh61p25apwmn0qnakbxgj1l142i9bv3z7v69cc"; depends=[affy convert lattice limma marray]; };
-  TypeInfo = derive2 { name="TypeInfo"; version="1.40.0"; sha256="108q2bxmqf4mshc5ixbf1v55099lzsprwii5qs0y9y2n8x5ra0h2"; depends=[]; };
-  UNDO = derive2 { name="UNDO"; version="1.16.0"; sha256="0pmdb7gkf7g2b45j5hiksppn75ja3r2nm71qr4a2841diz93fsri"; depends=[Biobase BiocGenerics boot MASS nnls]; };
-  UniProt_ws = derive2 { name="UniProt.ws"; version="2.14.0"; sha256="10m7qzcvhqvqskhrnxbbk2kx4fpq8dn9k2p8l665ds65ixv8xn9x"; depends=[AnnotationDbi BiocGenerics RCurl RSQLite]; };
-  Uniquorn = derive2 { name="Uniquorn"; version="1.2.0"; sha256="19pcbl37khg4m7h4amzzc28xpm5izg8nn998b42pjvibxg6x14hb"; depends=[DBI R_utils RSQLite stringr WriteXLS]; };
-  VanillaICE = derive2 { name="VanillaICE"; version="1.36.0"; sha256="00nf5zxjv5409qj79jh1mhidsgkxjk5piysadv2ak8xwpj9zznws"; depends=[Biobase BiocGenerics BSgenome_Hsapiens_UCSC_hg18 crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment]; };
-  VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.20.3"; sha256="10v8apgfw57nd4dxmdxdrijxpw135jpp2p8wrk3wjpb3hhfjp1qj"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; };
-  VariantFiltering = derive2 { name="VariantFiltering"; version="1.10.1"; sha256="0dy97x77v5ray8d5iw5brs15h4r9l6kizqvziccc47jxxsxl103i"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges graph Gviz IRanges RBGL Rsamtools RSQLite S4Vectors shiny SummarizedExperiment VariantAnnotation XVector]; };
-  VariantTools = derive2 { name="VariantTools"; version="1.16.0"; sha256="13i481iiv3vi1m1lwi2s1vjaaplb4y1l7blmyvpqbpa87ync5crl"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges gmapR IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; };
-  Vega = derive2 { name="Vega"; version="1.22.0"; sha256="11a8fz2fb2zyn6fgfa9hs5i4hsswp1hdxhahm41f4spn7acglmj7"; depends=[]; };
-  VegaMC = derive2 { name="VegaMC"; version="3.12.0"; sha256="1swjak8yg33ykrfa52jiq7v3rcgwzf1w664j6wifi5bcflgbjhg1"; depends=[Biobase biomaRt genoset]; };
-  XBSeq = derive2 { name="XBSeq"; version="1.4.0"; sha256="0f72qyhs8rsa5d4xbpgqd7lzxmgxcvk5dwqihfw714vg8mis7p8y"; depends=[Biobase Delaporte DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma roar]; };
-  XDE = derive2 { name="XDE"; version="2.20.0"; sha256="11phzwfpyc4dfhhgbfn54ybz71jl2z5wyysvfv34d63lv00jj3yp"; depends=[Biobase BiocGenerics genefilter gtools MergeMaid mvtnorm]; };
-  XVector = derive2 { name="XVector"; version="0.14.1"; sha256="1j14ip4c260kdp3zcmgfa2v8ky88csa0gfdg6a1xsb64s03hdbm6"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; };
-  YAPSA = derive2 { name="YAPSA"; version="1.0.0"; sha256="104ij0pwc8bfys8by0ha99fhjgr85n9havzcsakawna3vrkj2s3b"; depends=[circlize ComplexHeatmap corrplot dendextend GenomeInfoDb GenomicRanges GetoptLong ggplot2 gridExtra gtrellis KEGGREST lsei PMCMR reshape2 SomaticSignatures VariantAnnotation]; };
-  a4 = derive2 { name="a4"; version="1.22.0"; sha256="12c6y89nr4cck4fsx85bnsklpjic2fkyq550xjfjimy7a2jyx9pb"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; };
-  a4Base = derive2 { name="a4Base"; version="1.22.0"; sha256="0w1p7ggj9q33filrkgzqkdah6pb81d6lis3p0l4mmy254kgcc61s"; depends=[a4Core a4Preproc annaffy AnnotationDbi Biobase genefilter glmnet gplots limma mpm multtest]; };
-  a4Classif = derive2 { name="a4Classif"; version="1.22.0"; sha256="01c0gl0161psm8pbwwj7ny2zfgj7f1h9crzsj2hwl6240p771a51"; depends=[a4Core a4Preproc glmnet MLInterfaces pamr ROCR varSelRF]; };
-  a4Core = derive2 { name="a4Core"; version="1.22.0"; sha256="19wb5h9w7zw33hwacnj1y2ylg3ksh1w4vg0mhpgnmrj79zn26wqz"; depends=[Biobase glmnet]; };
-  a4Preproc = derive2 { name="a4Preproc"; version="1.22.0"; sha256="1wxf2yp52y63mr3jdsk7x1ah2xm39gwj0sz3fmp42bb1nrga57kh"; depends=[AnnotationDbi]; };
-  a4Reporting = derive2 { name="a4Reporting"; version="1.22.0"; sha256="0s57kfn9ca75cqscm6lhs2hw9jxydbcyvj9fwf93ygm731q47lrq"; depends=[annaffy xtable]; };
-  aCGH = derive2 { name="aCGH"; version="1.52.0"; sha256="0spz1y4vxi262h6dmrjdimwa58vsksys0mww80lgcqnggc3inzy2"; depends=[Biobase cluster multtest survival]; };
-  acde = derive2 { name="acde"; version="1.4.0"; sha256="1rabc0d7fnjw52i6qa4r27ch95jal7kyxmsn1iqfy8mcy8w0dqi4"; depends=[boot]; };
-  adSplit = derive2 { name="adSplit"; version="1.44.0"; sha256="0hk5wzssmfaz4vc4hm9xb3j3y285pvcpavcsvas6z68143j39cws"; depends=[AnnotationDbi Biobase cluster GO_db KEGG_db multtest]; };
-  affxparser = derive2 { name="affxparser"; version="1.46.0"; sha256="0byfdrrsd3nbs4qdnxcyzb0xd244nnbs5y0h8h6km3fnc2cibghx"; depends=[]; };
-  affy = derive2 { name="affy"; version="1.52.0"; sha256="1snq71ligf0wvaxa6zfrl13ydw0zfhspmhdyfk8q3ba3np4cz344"; depends=[affyio Biobase BiocGenerics BiocInstaller preprocessCore zlibbioc]; };
-  affyContam = derive2 { name="affyContam"; version="1.32.0"; sha256="0b3bmqnrk9mzl8ap7rabfq9mlfqi9x80721qbc99hycxywdb9cfj"; depends=[affy affydata Biobase]; };
-  affyILM = derive2 { name="affyILM"; version="1.26.0"; sha256="19iw1aaqw7a9snhyg00ldj5h2j9gvb04wjl56ikvxfa83i1w2w2d"; depends=[affxparser affy Biobase gcrma]; };
-  affyPLM = derive2 { name="affyPLM"; version="1.50.0"; sha256="02kqhjiffq52gsyaz31yz62chs2kh314ivqhwcpkr7pixhsdzhiw"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; };
-  affyPara = derive2 { name="affyPara"; version="1.34.0"; sha256="0f7yrgij5mvwp66hc04lnkp628iva4wb9xs54m573hmvjdmqcjxv"; depends=[affy affyio aplpack snow vsn]; };
-  affyQCReport = derive2 { name="affyQCReport"; version="1.52.0"; sha256="0sr24zaav5mqs47mv956m6qn7yjgldqmcjq3pqahb5bfbi6j3gmc"; depends=[affy affyPLM Biobase genefilter lattice RColorBrewer simpleaffy xtable]; };
-  affycomp = derive2 { name="affycomp"; version="1.50.0"; sha256="0ar8pv1k0ajx9l53cb0izarfap7wfji6rbjzwhkjzdijkr1ax3gh"; depends=[Biobase]; };
-  affycoretools = derive2 { name="affycoretools"; version="1.46.5"; sha256="0c1wpqwqlcdi0sa6dbxkmscd21wni1vrnj7wmxzbf37mq6wcggpp"; depends=[affy AnnotationDbi Biobase BiocGenerics edgeR gcrma ggplot2 GOstats gplots hwriter lattice limma oligoClasses ReportingTools RSQLite S4Vectors xtable]; };
-  affyio = derive2 { name="affyio"; version="1.44.0"; sha256="1svsl4mpk06xm505pap913x69ywks99262krag8y4ygpllj7dfyy"; depends=[zlibbioc]; };
-  affylmGUI = derive2 { name="affylmGUI"; version="1.48.0"; sha256="1zd7644p3zfw1dlgv1f7d53nml2l6bxmlaa96yazd4n37bvx1k4b"; depends=[affy affyio affyPLM AnnotationDbi BiocInstaller gcrma limma R2HTML tkrplot xtable]; };
-  affypdnn = derive2 { name="affypdnn"; version="1.48.0"; sha256="1fk5mvcg3w3p20mrwac972sxd1m1xza6dzd4kc9m5yzkjw7hp5p4"; depends=[affy]; };
-  agilp = derive2 { name="agilp"; version="3.6.0"; sha256="00fmn774rzp291fkkfncp1pg0ryg4203pnqhpqlgp58kw7dj1fmd"; depends=[]; };
-  alpine = derive2 { name="alpine"; version="1.0.0"; sha256="0gqqk0hv38f1jmlf1n78kphb2p9bsax9lv0mmd5ph5lsi0jdip7j"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph IRanges RBGL Rsamtools S4Vectors speedglm stringr SummarizedExperiment]; };
-  alsace = derive2 { name="alsace"; version="1.10.0"; sha256="1qikhcxs24ycap2f2wvkm27fw7r7mlzxzz18am13371igbc8rl9d"; depends=[ALS ptw]; };
-  altcdfenvs = derive2 { name="altcdfenvs"; version="2.36.0"; sha256="1z7c2kb5c8d28i110mf6vqnhzijhyz7icjrgjab0jg1jbfm466ad"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv S4Vectors]; };
-  ampliQueso = derive2 { name="ampliQueso"; version="1.12.0"; sha256="0p0ydmz185hbzvc9rcqk45hqs3288k4zd36x0a6kk6hyjmjx0z05"; depends=[DESeq doParallel edgeR foreach genefilter ggplot2 gplots knitr rgl rnaSeqMap samr statmod VariantAnnotation xtable]; };
-  anamiR = derive2 { name="anamiR"; version="1.0.1"; sha256="0rw4dg54vqmwl76917wgw2fz71zghg0jp6gal32vm3752hg92l3s"; depends=[agricolae DBI DESeq2 gplots limma lumi RMySQL SummarizedExperiment]; };
-  annaffy = derive2 { name="annaffy"; version="1.46.0"; sha256="0x0d9hhw7n8ay3d2kncl10b8q7ajb4mv8f6dpzg985cf6irm9pgb"; depends=[AnnotationDbi Biobase DBI GO_db KEGG_db]; };
-  annmap = derive2 { name="annmap"; version="1.16.0"; sha256="1qfm2r6w10nmixzwrk52mwkldgc6g2fqzlppd84wwf6mlvxsmb4j"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; };
-  annotate = derive2 { name="annotate"; version="1.52.1"; sha256="0yymz8qxgnbybvfhqrgkd1hh9dhwxdii1yxkhr1zicjgb35xixxb"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl XML xtable]; };
-  annotationTools = derive2 { name="annotationTools"; version="1.48.0"; sha256="095mrvw3vjr068zm04z8fdidjg3h8iijdvhdfizkfdp36a6lm3kk"; depends=[Biobase]; };
-  annotatr = derive2 { name="annotatr"; version="1.0.3"; sha256="0m4s98sdj5i6wifnf05hb4hjr1qqrpkwjrvc13iq151v2zmzhfbn"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges org_Dm_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db readr regioneR reshape2 rtracklayer S4Vectors TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Dmelanogaster_UCSC_dm6_ensGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene TxDb_Rnorvegicus_UCSC_rn5_refGene TxDb_Rnorvegicus_UCSC_rn6_refGene]; };
-  anota = derive2 { name="anota"; version="1.22.0"; sha256="0qknx73nx2v9y2d2wc57i07varii1y8cr0dvnjcvwr0bnnbi38za"; depends=[multtest qvalue]; };
-  antiProfiles = derive2 { name="antiProfiles"; version="1.14.0"; sha256="1frd43dcyaad6rrm8xdhf8vc4fwqyz6kyjlgvq7bxgfkdl8j0si0"; depends=[locfit matrixStats]; };
-  apComplex = derive2 { name="apComplex"; version="2.40.0"; sha256="09sd7jx0as0bqgga0ammqghkx8cff4rl8vs1nzhfpv5g00kzdqvh"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; };
-  aroma_light = derive2 { name="aroma.light"; version="3.4.0"; sha256="1cgad3xydmglfkqjqqxvxwxnq65m517hp1jwpw0lsfc13ip13f27"; depends=[matrixStats R_methodsS3 R_oo R_utils]; };
-  arrayMvout = derive2 { name="arrayMvout"; version="1.32.0"; sha256="1chrnjnl9yx3xjf1hk36x2xmh93hg1dnhifj8nh9c1hwgnwkkaf1"; depends=[affy affyContam Biobase lumi mdqc parody simpleaffy]; };
-  arrayQuality = derive2 { name="arrayQuality"; version="1.52.0"; sha256="0nrw7wzs73y4zcvdk96mqprpnzzcn44ys6i4cbk3hvmrqwfgrhj0"; depends=[gridBase hexbin limma marray RColorBrewer]; };
-  arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.30.0"; sha256="0vdvf8wb8dcm2zygqn34l24d6liw3v1qc2nx9sl6wb3zyi4ly60s"; depends=[affy affyPLM beadarray Biobase Cairo genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG vsn XML]; };
-  attract = derive2 { name="attract"; version="1.26.0"; sha256="0wmkydqkrpbn460wa1xsgjic9jfd0j764nn7f7fh5f5iwif1g2gj"; depends=[AnnotationDbi Biobase cluster GOstats KEGGREST limma org_Hs_eg_db reactome_db]; };
-  bacon = derive2 { name="bacon"; version="1.2.0"; sha256="1h38yh9d6mc4jbmhnq342ba8xndfmjr9mpf5gnq7hzb7ai2gmspy"; depends=[BiocParallel ellipse ggplot2]; };
-  ballgown = derive2 { name="ballgown"; version="2.6.0"; sha256="02f547y31a133jxqwlq0qianjj2lrlr9kn63x9i91vsyf22mb1ya"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; };
-  bamsignals = derive2 { name="bamsignals"; version="1.6.0"; sha256="1k42gvk5mgq4la1fp0in3an2zfdz69h6522jsqhmk0f6i75kg4mb"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; };
-  baySeq = derive2 { name="baySeq"; version="2.8.0"; sha256="136ll90xapsv1p6pns81kk4krgvbhsamhrych9gfb34r8p6pyplr"; depends=[abind edgeR GenomicRanges]; };
-  beadarray = derive2 { name="beadarray"; version="2.24.0"; sha256="1yjpkzknvznvc3qacdf6ma1jfxkw5basir3h0ipvfm6jnd07l1g3"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 illuminaio IRanges limma reshape2]; };
-  beadarraySNP = derive2 { name="beadarraySNP"; version="1.40.0"; sha256="1afy96fx6600cw92my65zds9w99y4yxyzbssr06ycfrzz3sd6xrb"; depends=[Biobase quantsmooth]; };
-  betr = derive2 { name="betr"; version="1.32.0"; sha256="093lynqrfbb6iai3s2wvwmjjx8p43nb32mxghxf3ymchaq0hnbgw"; depends=[Biobase limma mvtnorm]; };
-  bgafun = derive2 { name="bgafun"; version="1.36.0"; sha256="1kjrg0c686cj7ykvas7wknc3lvdlj4jvfybfwqxwnnzxrjqn350l"; depends=[ade4 made4 seqinr]; };
-  bgx = derive2 { name="bgx"; version="1.40.0"; sha256="1lzcgfjqgvd0a8r7qi8hyb1l99qw7d68bqzy97sqaaqnfb773qr4"; depends=[affy Biobase gcrma]; };
-  bigmelon = derive2 { name="bigmelon"; version="1.0.0"; sha256="1wj8x195gaqq3h0y62ilxsrh0xz17d0vfnbcbblg392a4c41p4j2"; depends=[Biobase gdsfmt methylumi minfi wateRmelon]; };
-  bigmemoryExtras = derive2 { name="bigmemoryExtras"; version="1.20.0"; sha256="0zd43xyx433s7aghs3x4963hf2pcr6q6qyx99bxrbkbdws5m9zql"; depends=[bigmemory]; };
-  bioCancer = derive2 { name="bioCancer"; version="1.2.0"; sha256="1szkrk81nyxfj8agd010495l8c3iirnixmwly38lz1f16w2p494l"; depends=[AlgDesign AnnotationFuncs Biobase broom car cgdsr clusterProfiler covr curl data_tree DiagrammeR DOSE dplyr DT geNetClassifier ggdendro ggplot2 GPArotation gridExtra htmlwidgets jsonlite knitr lubridate magrittr markdown MASS org_Hs_eg_db plyr pryr psych RCurl reactome_db ReactomePA readr scales shiny shinyAce stringr tibble tidyr visNetwork wordcloud XML yaml]; };
-  bioDist = derive2 { name="bioDist"; version="1.46.0"; sha256="1ark28jkh3zi0pc4a0xj9qmim38n9k919avx9ir35wxm81133g0a"; depends=[Biobase KernSmooth]; };
-  bioassayR = derive2 { name="bioassayR"; version="1.12.1"; sha256="09sd6naqai7qiwinjwdh6fxgswcs7z9jfh5w93vg34m29i8sry36"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; };
-  biobroom = derive2 { name="biobroom"; version="1.6.0"; sha256="1r2v43hpk0h6cnsaxxbks4c3c1jnakrpx693px2vg04r2gl9b9pc"; depends=[Biobase broom dplyr tidyr]; };
-  biocGraph = derive2 { name="biocGraph"; version="1.36.0"; sha256="1sxhb713sn32kpjin5m0rg32b7gw75d5a6b4m9gqj0p7537phkjd"; depends=[BiocGenerics geneplotter graph Rgraphviz]; };
-  biocViews = derive2 { name="biocViews"; version="1.42.0"; sha256="07rjk10b91pkriyq297w86199r2d3sfji3ggs9mq2gyalsa8y4b6"; depends=[Biobase graph RBGL RCurl RUnit XML]; };
-  biomaRt = derive2 { name="biomaRt"; version="2.30.0"; sha256="1x0flcghq71784q2l02j0g4f9jkmyb14f6i307n6c59d6ji7h7x6"; depends=[AnnotationDbi RCurl XML]; };
-  biomformat = derive2 { name="biomformat"; version="1.2.0"; sha256="1p768n1kw82bl2n1ifsdfvl7rxbxhgg6qg6f72nqn07x2s14rr6g"; depends=[jsonlite Matrix plyr rhdf5]; };
-  biomvRCNS = derive2 { name="biomvRCNS"; version="1.14.0"; sha256="111mhlfmnyz2m0n1s6f72kyd37fbs73fdcwva06p8b3v21pq4zbx"; depends=[GenomicRanges Gviz IRanges mvtnorm]; };
-  biosigner = derive2 { name="biosigner"; version="1.2.4"; sha256="0ckmmr9lsyvzarwpz49iwz2w31sjzlvp9pblaj5xkw7x2cj06i8l"; depends=[Biobase e1071 randomForest ropls]; };
-  biosvd = derive2 { name="biosvd"; version="2.10.0"; sha256="1gd93p178hs9rhh1w1vgxygw997lk3asmmgajkk6mh7463z340hg"; depends=[Biobase BiocGenerics NMF]; };
-  biovizBase = derive2 { name="biovizBase"; version="1.22.0"; sha256="0f3zwn0g0rc3ld8dd5sgpr14l9aff57j766h4grkiyazyyb46bnh"; depends=[AnnotationDbi BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; };
-  birta = derive2 { name="birta"; version="1.18.0"; sha256="101bwd0miz377ahc1v7g0rzx1m8qzgy2wmpw57bqnpfn0xawxzg3"; depends=[Biobase limma MASS]; };
-  birte = derive2 { name="birte"; version="1.10.0"; sha256="1kkj41d5w70kak00564zjycrcbr8vq3fxkg5f5j710b5shms91v2"; depends=[Biobase glmnet limma MASS nem Rcpp RcppArmadillo]; };
-  blima = derive2 { name="blima"; version="1.8.0"; sha256="181xqsmqq1g52dvkxx7b5myj9fd1ss15x853n617fsij8sbnbarb"; depends=[beadarray Biobase BiocGenerics]; };
-  bridge = derive2 { name="bridge"; version="1.38.0"; sha256="1jfyg88i8yw6nz15sn3mhg5d7ms5xmimaca57bpj2y8yzzbbmg2k"; depends=[rama]; };
-  bsseq = derive2 { name="bsseq"; version="1.10.0"; sha256="0akzqcpcfsldjxyn9znyzdfczkkjpxxf9hfqzjqd3yj4x1hgnf4j"; depends=[Biobase BiocGenerics data_table GenomeInfoDb GenomicRanges gtools IRanges limma locfit matrixStats permute R_utils S4Vectors scales SummarizedExperiment]; };
-  bumphunter = derive2 { name="bumphunter"; version="1.14.0"; sha256="08r5bvxnx96rv34lww0ccn1qhy98kwsdlvyp2bq21bmwqgfm5m03"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; };
-  caOmicsV = derive2 { name="caOmicsV"; version="1.4.0"; sha256="06zksrn6psfwfxqagf5ksqakqkpm32sls4vi8nvfpwkh69s1r7va"; depends=[bc3net igraph]; };
-  canceR = derive2 { name="canceR"; version="1.6.0"; sha256="10cai1l21cjdj61rp0s6w1a03fn03dzgcz9snb76yrr24cynhrf8"; depends=[Biobase cgdsr circlize Formula geNetClassifier GSEABase GSEAlm phenoTest plyr rpart RUnit survival tcltk2 tkrplot]; };
-  cancerclass = derive2 { name="cancerclass"; version="1.18.0"; sha256="1zff6wz0529gc22c9bfnwa95xxadyhfbxjvr1b51w4zgms2bicfr"; depends=[binom Biobase]; };
-  casper = derive2 { name="casper"; version="2.8.0"; sha256="0ckqx8i7pgmjhznpw8pggc2f1147sd7vqhw2a4f0na9mv27l74iq"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; };
-  categoryCompare = derive2 { name="categoryCompare"; version="1.18.0"; sha256="0ppis6agdpccjg8bwr91axy770v67al93pg50zmk1rvbfl25b9gz"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCytoscape]; };
-  ccmap = derive2 { name="ccmap"; version="1.0.0"; sha256="1djajivpfz8cgdq5nnhyr48gvdq8igjqfkxbibw975y7ybsrc44z"; depends=[AnnotationDbi BiocInstaller ccdata data_table doParallel foreach xgboost]; };
-  ccrepe = derive2 { name="ccrepe"; version="1.10.0"; sha256="14y97n28jqj78xscprgbnlwq4abf1vks3ipmp0w9y1yjj0jk0xl2"; depends=[infotheo]; };
-  cellGrowth = derive2 { name="cellGrowth"; version="1.18.0"; sha256="1yxlcli3h35aw9nzffnpv4nby255bmlkrwcdh6rr7i04393qjpzc"; depends=[lattice locfit]; };
-  cellHTS2 = derive2 { name="cellHTS2"; version="2.38.0"; sha256="117g37rvi92i21mg2ifxy9dxilvgf52nz3f51jdlcgf1w5zvm3n1"; depends=[Biobase Category genefilter GSEABase hwriter locfit prada RColorBrewer splots vsn]; };
-  cellTree = derive2 { name="cellTree"; version="1.4.0"; sha256="1aqjz3cwl34inm7bw9pspgpi15h81si8gki3015j1ib8r45n9wda"; depends=[gplots igraph maptpx slam topGO topicmodels xtable]; };
-  cellity = derive2 { name="cellity"; version="1.2.0"; sha256="1lzrhqs1jq8khh3gmca381kcr6szmc17ng2jxpz025isbpc9b8y2"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; };
-  cghMCR = derive2 { name="cghMCR"; version="1.32.0"; sha256="1d9vygzf4dinr4xwcz7091zlyk798ph99g27dywpkqr7yijgjz8m"; depends=[BiocGenerics CNTools DNAcopy limma]; };
-  charm = derive2 { name="charm"; version="2.20.0"; sha256="14vf7jdi5hwk3rysm59kylzfajak0wqafipa8r02rij2h1354c3v"; depends=[Biobase Biostrings BSgenome ff fields genefilter gtools IRanges limma nor1mix oligo oligoClasses preprocessCore RColorBrewer siggenes SQN sva]; };
-  chimera = derive2 { name="chimera"; version="1.16.0"; sha256="0j7nhardm70p2l4svdb1cyqwk3j2247q5ig7ya72az5bh3bmamb6"; depends=[AnnotationDbi Biobase BSgenome_Hsapiens_UCSC_hg19 GenomicAlignments GenomicRanges Homo_sapiens Rsamtools TxDb_Hsapiens_UCSC_hg19_knownGene]; };
-  chipenrich = derive2 { name="chipenrich"; version="1.12.1"; sha256="0vqhlljikhfb3byla05s0w95n0rfyww1rjp7g6zdsf09fy79pcw7"; depends=[chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra mgcv plyr rms S4Vectors stringr]; };
-  chipseq = derive2 { name="chipseq"; version="1.24.0"; sha256="115ayp82rs99iaswrx45skw1i5iacgwzz5k8rzijbp5qic0554n0"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; };
-  chopsticks = derive2 { name="chopsticks"; version="1.38.0"; sha256="1cxr419sdvy5s2whcs49hda3zy5fbgzjqgj9bb651qcwk6vc5n0h"; depends=[survival]; };
-  chroGPS = derive2 { name="chroGPS"; version="1.22.0"; sha256="0kq1dgik5dkhqb1as9zpwzpyhbw16c766vyn5all4frh0mpdiy0z"; depends=[Biobase changepoint cluster DPpackage GenomicRanges ICSNP MASS]; };
-  chromDraw = derive2 { name="chromDraw"; version="2.4.0"; sha256="0rzrcjzwqjb40l8yc25gscl6hnxwprrv738p46kmdh3a08ghxv5v"; depends=[GenomicRanges Rcpp]; };
-  chromPlot = derive2 { name="chromPlot"; version="1.2.0"; sha256="06wg345hkkpaq0m620sqgnwvk11qfkhn5yr8nyv9cbdbihqvg0if"; depends=[biomaRt GenomicRanges]; };
-  chromstaR = derive2 { name="chromstaR"; version="1.0.0"; sha256="1qyb07dsag64gspjk29nd3ppylzicsq7rnjafdfhs9pjqwv0vshf"; depends=[bamsignals chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools S4Vectors]; };
-  cisPath = derive2 { name="cisPath"; version="1.14.0"; sha256="108d1m3d07zblij9wsz2l6bw226bvwwl8w0gq3wdxjmgyjj48jzi"; depends=[]; };
-  cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.12.0"; sha256="09bbqapri4vw9mdlch0hw6v49mxqbknrrj5q9ssyzhjhikz954sq"; depends=[BiocGenerics BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomicRanges seqinr]; };
-  cleaver = derive2 { name="cleaver"; version="1.12.0"; sha256="0dnl7ihxhl640k91div133rz9kxa43wkvfyxkyqv31winymk0fy4"; depends=[Biostrings IRanges S4Vectors]; };
-  clippda = derive2 { name="clippda"; version="1.24.0"; sha256="0dqlr468awg4r1rnskzjj77c0amcq0nj1rh8j9s5ad6jvspyk1wk"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; };
-  clipper = derive2 { name="clipper"; version="1.14.0"; sha256="1qrj1l7qdkq6s8k2zq5rfkwnag0f1ivhcjcnzyszkf8nzpxz019g"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph RBGL Rcpp]; };
-  clonotypeR = derive2 { name="clonotypeR"; version="1.12.0"; sha256="1j4s26l2k0msw8yza92348z8kpji0c9a1a83gjn7lazbs27arlnf"; depends=[]; };
-  clst = derive2 { name="clst"; version="1.22.0"; sha256="1yilfyf6azwdc48rdvfanjl0anl275qc6p1f2agyf5nfrhacpaaz"; depends=[lattice ROC]; };
-  clstutils = derive2 { name="clstutils"; version="1.22.0"; sha256="0wc7xv65dg2qi2778qlk49d3snx4ahv9km74jdysixwww2fqqqs4"; depends=[ape clst lattice rjson RSQLite]; };
-  clustComp = derive2 { name="clustComp"; version="1.2.2"; sha256="0pmna9q3y607d04pqyi4vkl5r7hl41cywsplpkmkwmwp8y1v2zls"; depends=[sm]; };
-  clusterExperiment = derive2 { name="clusterExperiment"; version="1.0.0"; sha256="0idg0iw7lb1iqzxwpilqh7njz2yv6783nzvmnxvdnx1vj7xihdky"; depends=[ape cluster dendextend howmany limma locfdr matrixStats NMF phylobase RColorBrewer SummarizedExperiment]; };
-  clusterProfiler = derive2 { name="clusterProfiler"; version="3.2.14"; sha256="0nip67hzcwc1zary2abcki4cgz32ixxkv9b8apllvz5a26scn02r"; depends=[AnnotationDbi DOSE ggplot2 GO_db GOSemSim IRanges magrittr plyr qvalue tidyr]; };
-  clusterStab = derive2 { name="clusterStab"; version="1.46.0"; sha256="1h3j1qs6d5d4whmzljzjlg6favlb8r4nk2sm8sk5kjad37ywz3cm"; depends=[Biobase]; };
-  cn_farms = derive2 { name="cn.farms"; version="1.22.0"; sha256="18q8v82i90sj2c19idv5czy8dvlr2qghdlj29nqn8rwh8i04ayz9"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; };
-  cn_mops = derive2 { name="cn.mops"; version="1.20.1"; sha256="0wrf4k0a2zc6ymhlr6shncw4xdpfzwzfxig7ddrrwx4brrhn1c91"; depends=[Biobase BiocGenerics exomeCopy GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; };
-  cnvGSA = derive2 { name="cnvGSA"; version="1.18.0"; sha256="18i6g6hmky6r9c6vgs67kxq5vvyaldlghlbpv518awd0y135fx4x"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; };
-  coGPS = derive2 { name="coGPS"; version="1.18.0"; sha256="0hcyha03gyh6zp1b24h2n9nx0vkzphh2d10nvss3ryaqj9305cxd"; depends=[]; };
-  coMET = derive2 { name="coMET"; version="1.6.0"; sha256="0biiz7g893l12ibqdx16zagyk124yjz41mmb8gb283rhlibf6bpm"; depends=[biomaRt colortools corrplot GenomicRanges ggbio ggplot2 gridExtra Gviz hash IRanges psych rtracklayer S4Vectors trackViewer]; };
-  coRNAi = derive2 { name="coRNAi"; version="1.24.0"; sha256="0qa7wrsz9m34dr7dm97cqwl2bzxn8zr0fkdqyr6x1jkixxfs76p1"; depends=[cellHTS2 gplots lattice limma locfit MASS]; };
-  cobindR = derive2 { name="cobindR"; version="1.12.0"; sha256="1nygdg9bipj1nwv6i1dk3mmmba7jzmf2q4wmqwf9ivgjfaskqd19"; depends=[BiocGenerics biomaRt Biostrings BSgenome gmp gplots IRanges mclust rtfbs seqinr yaml]; };
-  codelink = derive2 { name="codelink"; version="1.42.0"; sha256="0kxh3qs8plqlbq38mqyzc8lqcdsh4ig5ar2s12w5z8f17flax1fh"; depends=[annotate Biobase BiocGenerics limma]; };
-  cogena = derive2 { name="cogena"; version="1.8.0"; sha256="0q5w7bjaizsvzi576lpkh59j0ynjklq1h2f9sz4wssvi9xpkg7h8"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2]; };
-  compEpiTools = derive2 { name="compEpiTools"; version="1.8.0"; sha256="0bc7pmxi7j6gv1irwaab1z3x350pnnarp216lhvkn799g6bard9r"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; };
-  compcodeR = derive2 { name="compcodeR"; version="1.10.0"; sha256="0fzwxnf2n408k3548c3ravddd1m6vdc6212vnka5vggjhr6aapbm"; depends=[caTools edgeR gdata ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS modeest ROCR sm stringr vioplot]; };
-  consensusSeekeR = derive2 { name="consensusSeekeR"; version="1.2.0"; sha256="0fmryl0lhahh75iy1ngqvv607iz1y9a1div3wkhw22hkzwkj0r9m"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors stringr]; };
-  contiBAIT = derive2 { name="contiBAIT"; version="1.2.0"; sha256="07l8fy2caynakkixyipym7wmnvrjdng6j3gqqy6lbsczc18l2ljm"; depends=[BH BiocParallel clue cluster colorspace diagram DNAcopy exomeCopy GenomicAlignments GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; };
-  conumee = derive2 { name="conumee"; version="1.8.0"; sha256="0a1abk4xfzlmz87gl6iysgriy1crs7yzhr11qajbayf7qlajyk1l"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest IRanges minfi rtracklayer]; };
-  convert = derive2 { name="convert"; version="1.50.0"; sha256="01cgfnlnry5p3zjnb93cwm16kqdcl2szbps4pvgs3b8myznq3c4k"; depends=[Biobase limma marray]; };
-  copa = derive2 { name="copa"; version="1.42.0"; sha256="1k93l7sgia6p6acbzdg48pr3l7lcc6v3k4g2mgixm2r130i78s3v"; depends=[Biobase]; };
-  copynumber = derive2 { name="copynumber"; version="1.14.0"; sha256="1hm0k2gqgsgqvald19x09pf3x37xyyjwm5f32dxivfb04n504s1v"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; };
-  cosmiq = derive2 { name="cosmiq"; version="1.8.0"; sha256="12bc7hbjww6kza2hrg2x691h3nrsx74hji93xsk14zkf5z3c17wd"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; };
-  covEB = derive2 { name="covEB"; version="1.0.0"; sha256="0sbcsf6y68n49w7zvzci3q3dmgi7vji3b3rfa4xzqzdj89zzns8z"; depends=[Biobase gsl igraph mvtnorm]; };
-  covRNA = derive2 { name="covRNA"; version="1.0.0"; sha256="0igvcnni8in70dch50l6vx8aj66rgbaxh93y0bv86mnvmzs5avhk"; depends=[ade4 Biobase genefilter]; };
-  cpvSNP = derive2 { name="cpvSNP"; version="1.6.0"; sha256="0yw04dsbhvg1hfhd71b76cny79r553y8gfin2jzzy6jkifzd19fq"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; };
-  cqn = derive2 { name="cqn"; version="1.20.0"; sha256="1ac8kwd43ynli6hwfz9innlpiys1vyvq0ic8garixwpv9qwayrvs"; depends=[mclust nor1mix preprocessCore quantreg]; };
-  crisprseekplus = derive2 { name="crisprseekplus"; version="1.0.0"; sha256="1cvz483j94v2kk6fcjh22kj71zs097wghqfsdmr128za38x9vxf0"; depends=[AnnotationDbi BiocInstaller BSgenome CRISPRseek DT GenomicFeatures GenomicRanges GUIDEseq hash shiny shinyjs]; };
-  crlmm = derive2 { name="crlmm"; version="1.32.0"; sha256="1pa8879k0xdgmz5mk4lq8rhi0v9ai01bv3h1c0cq6blhvyca1rw2"; depends=[affyio beanplot Biobase BiocGenerics ellipse ff foreach illuminaio lattice limma matrixStats mvtnorm oligoClasses preprocessCore RcppEigen SNPchip VGAM]; };
-  crossmeta = derive2 { name="crossmeta"; version="1.0.1"; sha256="1fid7bl27vsj6kxkwpymkvm5b8p5xq25xk3d8x2r1k4sx10nfidl"; depends=[affxparser affy AnnotationDbi Biobase BiocGenerics BiocInstaller data_table DT fdrtool GEOquery limma matrixStats metaMA miniUI oligo pander RColorBrewer rdrop2 shiny stringr sva]; };
-  csaw = derive2 { name="csaw"; version="1.8.1"; sha256="0vq3kxwqaaxz7k710f5y3pb8jidiqp815f5h4hy174cgmj3y1sz2"; depends=[AnnotationDbi BiocGenerics BiocParallel edgeR GenomeInfoDb GenomicFeatures GenomicRanges IRanges limma Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; };
-  ctc = derive2 { name="ctc"; version="1.48.0"; sha256="137087cms5rdivm1fh2m5v414lcf96sch409b3yapkl8zva99i0q"; depends=[amap]; };
-  ctsGE = derive2 { name="ctsGE"; version="1.0.0"; sha256="00dmky3fggz0xq1hwwk5xk9lbk93jmym5fc0g628apq520g9h7b0"; depends=[ccaPP ggplot2 limma reshape2 shiny stringr]; };
-  cummeRbund = derive2 { name="cummeRbund"; version="2.16.0"; sha256="1191frlhs738xcfqcw0la7jx4jhiqfnqqcaj1a8z61p0rkx2vi70"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer S4Vectors]; };
-  customProDB = derive2 { name="customProDB"; version="1.14.1"; sha256="0m4gl4w7lwvz1irwbrgx4xz8ipz55h2xz85pl89jpr35cxv7gh6z"; depends=[AnnotationDbi biomaRt Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer S4Vectors stringr VariantAnnotation]; };
-  cycle = derive2 { name="cycle"; version="1.28.0"; sha256="17azpsw3ah7ifshn0gfnfa458y70l551ix4s623d3wjbzdbk03kj"; depends=[Biobase Mfuzz]; };
-  cytofkit = derive2 { name="cytofkit"; version="1.6.5"; sha256="1ml3g8p9r7azg3c31izrvkbpfss49q8ns293jqsk9470h9yl2p4m"; depends=[Biobase colourpicker destiny doParallel e1071 flowCore FlowSOM ggplot2 ggrepel gplots igraph pdist plyr RANN Rcpp reshape2 Rtsne shiny vegan VGAM]; };
-  dSimer = derive2 { name="dSimer"; version="1.0.0"; sha256="0a36xlq0hsn7krf23ynmny6gckv3iisisr7pp928jblh43pspr0r"; depends=[AnnotationDbi ggplot2 GO_db igraph org_Hs_eg_db Rcpp reshape2]; };
-  daMA = derive2 { name="daMA"; version="1.46.0"; sha256="04x1ipqa04khki98yq8qyzlwjwz3p3ra18s4qc1hkfqsgqij20bm"; depends=[MASS]; };
-  dada2 = derive2 { name="dada2"; version="1.2.2"; sha256="1996n96afn074h5mkwbdi8chvswb8xc9ms6rnbb060vdzwsrfi7k"; depends=[Biostrings data_table ggplot2 Rcpp RcppParallel reshape2 ShortRead]; };
-  dagLogo = derive2 { name="dagLogo"; version="1.12.0"; sha256="14swyk3vywbm09cs4ny7wrjy9q4nmpy5nis1ik18ilmifqff3xh7"; depends=[biomaRt Biostrings grImport motifStack pheatmap]; };
-  dcGSA = derive2 { name="dcGSA"; version="1.2.0"; sha256="0fz730m7agvidrq3rdkymaa9vn5ry0jj2p8bzlpzb8ab7siaqapr"; depends=[BiocParallel Matrix]; };
-  ddCt = derive2 { name="ddCt"; version="1.30.0"; sha256="03j2njmx90ivd9rb2vsd4fxcciwy9q8fj48rv3z43wrq4vbkf8s8"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; };
-  ddgraph = derive2 { name="ddgraph"; version="1.18.0"; sha256="17rmc4fcf1vac9jw95h4nqr32jk7vpn10ddxgl0qp9zcabxd8vm6"; depends=[bnlearn graph gtools MASS pcalg plotrix RColorBrewer Rcpp]; };
-  debrowser = derive2 { name="debrowser"; version="1.3.11"; sha256="18hc0zlw0dzhqsnjhw7grb77y3mya2hdp1g4kgkk9fah44y8xihs"; depends=[annotate AnnotationDbi baySeq clusterProfiler d3heatmap DESeq2 devtools DOSE DT edgeR GenomicRanges ggplot2 ggvis gplots igraph IRanges jsonlite limma org_Hs_eg_db org_Mm_eg_db RColorBrewer RCurl reshape2 S4Vectors shiny shinydashboard shinyjs stringi SummarizedExperiment sva V8]; };
-  deepSNV = derive2 { name="deepSNV"; version="1.20.0"; sha256="00zl9sxifx4z2ydab6fdfyaidfin0m79v603nwv1h3kac703awvs"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; };
-  deltaGseg = derive2 { name="deltaGseg"; version="1.14.0"; sha256="1qwzfg284ac8snwc1v9lwqd2cfkzvgp1gc0baf802kdwnp94hpq5"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; };
-  derfinder = derive2 { name="derfinder"; version="1.8.5"; sha256="1snwy5q99jy5lcnrdmanclyhfsiax5gslznphzpps19hdzby045r"; depends=[AnnotationDbi BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; };
-  derfinderHelper = derive2 { name="derfinderHelper"; version="1.8.1"; sha256="0920kl7lsjf9hzxh304q2n4n5nscxmaiacxqbn2ql9ja7saypqag"; depends=[IRanges Matrix S4Vectors]; };
-  derfinderPlot = derive2 { name="derfinderPlot"; version="1.8.1"; sha256="0fvyira43hknhs72s520czprgcgy4hh54pmcsd3caca2f077cxks"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer reshape2 S4Vectors scales]; };
-  destiny = derive2 { name="destiny"; version="2.0.8"; sha256="1zqmfi8ha028lcwb147m4xin4zkgrg5aqh4mp0aidqv0d8p59hkp"; depends=[Biobase BiocGenerics FNN Hmisc igraph Matrix proxy Rcpp RcppEigen scales scatterplot3d smoother VIM]; };
-  dexus = derive2 { name="dexus"; version="1.14.0"; sha256="04vihwcvb7kx1i1pws5rhk1cdnkrhh6ipi8fwz2yfizyc253hfmh"; depends=[BiocGenerics]; };
-  diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.56.0"; sha256="17fyvgw9izdzhh1nmd0g0ibaxsy36438dbvszf9c447h21qqr3r5"; depends=[minpack_lm]; };
-  diffHic = derive2 { name="diffHic"; version="1.6.0"; sha256="1331cf5d774hsd037gvzjx8dym5m0kk2azjb17gls1fqd08y33g6"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit rhdf5 Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; };
-  diffloop = derive2 { name="diffloop"; version="1.2.2"; sha256="1hkhprz6bxpd94l5648j03xxn5rj85dl4dl419pfi4n7r21gywrq"; depends=[Biobase biomaRt data_table dplyr edgeR foreach GenomeInfoDb GenomicRanges ggplot2 IRanges limma locfit matrixStats pbapply plyr readr reshape2 rtracklayer S4Vectors statmod Sushi]; };
-  diggit = derive2 { name="diggit"; version="1.6.0"; sha256="0n5slh0w1g8zdnrbqxfram5j82yy5aaw9m7h5r5ybw6hbwmjf93r"; depends=[Biobase ks viper]; };
-  dks = derive2 { name="dks"; version="1.20.0"; sha256="09y7h7gw5p3rxrbwg4mq4qpp89cv6gj45idilv30jvsjyvv03a31"; depends=[cubature]; };
-  domainsignatures = derive2 { name="domainsignatures"; version="1.34.0"; sha256="0sw6fyv91nrgf55g0387hghxa7gsfcqb81lmpg11ccvm8pzj7hlp"; depends=[AnnotationDbi biomaRt KEGG_db prada]; };
-  doppelgangR = derive2 { name="doppelgangR"; version="1.2.0"; sha256="06zbgkyi38v80d2szfhklbnxpnl3lfqq78ha7y8zwa2l16pkpj0m"; depends=[Biobase BiocParallel digest impute mnormt sva]; };
-  dualKS = derive2 { name="dualKS"; version="1.34.0"; sha256="1qh3v18gp1flryj6wzyvi20rd7gh35rvq9cyir72cj801w95rkzs"; depends=[affy Biobase]; };
-  dupRadar = derive2 { name="dupRadar"; version="1.4.0"; sha256="1m0fk5aq5nx98khkahq1wwq4hs6rfnf3gi0bnyfcm0719hk70nah"; depends=[Rsubread]; };
-  dyebias = derive2 { name="dyebias"; version="1.34.0"; sha256="16nxwg53ccx128k5ih26gm9z18n6prbas7nxm5hgfl44ihl6a2w6"; depends=[Biobase marray]; };
-  easyRNASeq = derive2 { name="easyRNASeq"; version="2.10.0"; sha256="1jjwskac47scnbs0xdxw48l2lm389gpf38rg93z6z4sri5qk9xbk"; depends=[Biobase BiocGenerics BiocParallel biomaRt Biostrings DESeq edgeR GenomeInfoDb genomeIntervals GenomicAlignments GenomicRanges IRanges locfit LSD Rsamtools S4Vectors ShortRead SummarizedExperiment]; };
-  ecolitk = derive2 { name="ecolitk"; version="1.46.0"; sha256="1mz2qk6cf0sq2395p7snj9mjqnsh3jkcbj3hd4awc4iyj4zrcw3l"; depends=[Biobase]; };
-  edge = derive2 { name="edge"; version="2.6.0"; sha256="02825wnwysafi06vr5vglwld52hz9dvyrsz57rxx7bfras1y60xw"; depends=[Biobase jackstraw MASS qvalue snm sva]; };
-  edgeR = derive2 { name="edgeR"; version="3.16.5"; sha256="04vpa0a6dkkjyvvfbkmfjyaxf2ldkagi66g028qpaszd8jsk8yiv"; depends=[limma locfit]; };
-  eegc = derive2 { name="eegc"; version="1.0.0"; sha256="00l7aym526p9l6iz3j72v9n2c42l70mm1nx7q653jfhbivdikh0i"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; };
-  eiR = derive2 { name="eiR"; version="1.14.1"; sha256="16s07903wq9wwirkwv4pd77kpi1rkbmlyg24bg38zlanfyqprqfq"; depends=[BH BiocGenerics ChemmineR DBI digest RCurl RUnit snow snowfall]; };
-  eisa = derive2 { name="eisa"; version="1.26.0"; sha256="0hvpk8jsh5f0b23n4bk8h238j4afw1fdkcr9l4k3m9hm4078xjj0"; depends=[AnnotationDbi Biobase BiocGenerics Category DBI genefilter isa2]; };
-  ensemblVEP = derive2 { name="ensemblVEP"; version="1.14.0"; sha256="175fj7w2zawpymsjbcqxwp82la6lb60ajp5sbz3hkr9mscb9xi19"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; };
-  ensembldb = derive2 { name="ensembldb"; version="1.6.2"; sha256="1hxvjplkgkibjfzrbi6whqr7czf5digh96j7ww6szdyxy86gbf3r"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools RSQLite rtracklayer S4Vectors]; };
-  epigenomix = derive2 { name="epigenomix"; version="1.14.0"; sha256="0wp8xbqy98b9i1vwdhjg3wbsi2nfqm9vl1alzp67s92sdafa0lax"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; };
-  epivizr = derive2 { name="epivizr"; version="2.4.1"; sha256="119q39cr0fawrr4a64qx4fxddwmxcav44fq4i0dip0wf7pr7wwrw"; depends=[epivizrData epivizrServer GenomicRanges IRanges S4Vectors]; };
-  epivizrData = derive2 { name="epivizrData"; version="1.2.0"; sha256="0vr3czsdky6f4s60jg8ddm47kf5qsk3dj76kwwbaz9ffd3sgsv0z"; depends=[Biobase epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; };
-  epivizrServer = derive2 { name="epivizrServer"; version="1.2.0"; sha256="0ajxc77g604m5756bx8ivv0jqfdkglh4vjc4295d1dzwml555xil"; depends=[httpuv mime R6 rjson]; };
-  epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.2.0"; sha256="0nm644hmryyn8wsgzm129nldixn6z3yqff6851c7nwifz7vkzsln"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; };
-  erccdashboard = derive2 { name="erccdashboard"; version="1.8.0"; sha256="09hba0gbfgq7799kd41vm4j7qsyhkfg1awi8mymqqfb9fkdladkh"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr QuasiSeq qvalue reshape2 ROCR scales stringr]; };
-  erma = derive2 { name="erma"; version="0.6.0"; sha256="1540i8m9fr2v8n8pzf0zfjcv2gxmfd1b2fld73hkcfv2mkfiks1m"; depends=[AnnotationDbi Biobase BiocGenerics foreach GenomicFiles GenomicRanges ggplot2 Homo_sapiens rtracklayer S4Vectors shiny SummarizedExperiment]; };
-  esetVis = derive2 { name="esetVis"; version="1.0.1"; sha256="1s56qkm0r93bl7bfsp804q5fhcqmkazwh9g5jv01v23llsd6i0b6"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; };
-  eudysbiome = derive2 { name="eudysbiome"; version="1.4.0"; sha256="1sjqn0l25hw8y8i0g0ba22h5z9drj7m6104dwyfl41rprrasxjps"; depends=[Biostrings plyr R_utils Rsamtools]; };
-  exomeCopy = derive2 { name="exomeCopy"; version="1.20.0"; sha256="1hdhbnb318m05bhiqijnci1d0q40d0lpw5cnvsszg6jykks3axxm"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; };
-  exomePeak = derive2 { name="exomePeak"; version="2.8.0"; sha256="0573n29115djdbb47dkidwrx9m9j84ajamqanq0vx8rgjrg2xljm"; depends=[GenomicAlignments GenomicFeatures Rsamtools rtracklayer]; };
-  explorase = derive2 { name="explorase"; version="1.38.0"; sha256="04338jfp3kf8wngm15ws3q2r6d2wc7kvzvf50nmx6dji52952807"; depends=[limma rggobi RGtk2]; };
-  fCCAC = derive2 { name="fCCAC"; version="1.0.0"; sha256="0mgzk2siwwq5ajmzqv7k5w3a8zsha7vawqj3frzfmsccbaifdw9h"; depends=[ComplexHeatmap fda genomation GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors]; };
-  fCI = derive2 { name="fCI"; version="1.4.0"; sha256="188599kcl50k3lvdn5z1r3xy4fnipma2idacxglrfh5pxbnc0wf7"; depends=[FNN gtools psych rgl VennDiagram zoo]; };
-  fabia = derive2 { name="fabia"; version="2.20.0"; sha256="14lnyc9b0h9kb0xp7miiz3znwsbdb3ar1j5qlnfl0s9syc9y0p46"; depends=[Biobase]; };
-  facopy = derive2 { name="facopy"; version="1.8.0"; sha256="02z3bdsiz3crzlb038av9bsmbwq2wi3hxfdizngkcc8x2zp4gl4f"; depends=[annotate cgdsr coin data_table DOSE facopy_annot FactoMineR ggplot2 GO_db GOstats graphite gridExtra igraph IRanges MASS nnet reshape2 Rgraphviz S4Vectors scales]; };
-  factDesign = derive2 { name="factDesign"; version="1.50.0"; sha256="0zmbnb5nf6724k6xbmn19pp2jflfr0ckl11zhms0yhhmagd17wlz"; depends=[Biobase]; };
-  farms = derive2 { name="farms"; version="1.26.0"; sha256="00hxllk193v5rbmqzayv7cizlz1kpba7jpxafd2n02471ga7qjvf"; depends=[affy Biobase MASS]; };
-  fastLiquidAssociation = derive2 { name="fastLiquidAssociation"; version="1.10.0"; sha256="0aqagldg2qc8fhk6131dj4rr5yka0sr19m7pqr1pxczg6gn7yxpr"; depends=[Hmisc LiquidAssociation WGCNA]; };
-  fastseg = derive2 { name="fastseg"; version="1.20.0"; sha256="1ax0c5apmixyl7daahb3wqq8m8mc6prrylgfgbnv02rx5b3ii9hn"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors]; };
-  fdrame = derive2 { name="fdrame"; version="1.46.0"; sha256="1zc40aa32jijmvxc07sv4gp0hdw0m4rd06aslfjyb7ngsz16lik6"; depends=[]; };
-  ffpe = derive2 { name="ffpe"; version="1.18.0"; sha256="0p1sdapm6394j2xknn44g1vgry1ys004q9fkgchv40yy874ym1w9"; depends=[affy Biobase BiocGenerics lumi methylumi sfsmisc TTR]; };
-  fgsea = derive2 { name="fgsea"; version="1.0.2"; sha256="1yq4s4g4xxzcpkv9dpbg29444iy38vfgwj4wgr47rjjq8njfblfx"; depends=[BiocParallel data_table fastmatch ggplot2 gridExtra Rcpp]; };
-  flagme = derive2 { name="flagme"; version="1.30.0"; sha256="0s6f1928fswv8fvbqrhgq6ah0j7pqpar9q5xs3nwmig3nb9x8win"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; };
-  flipflop = derive2 { name="flipflop"; version="1.12.0"; sha256="1sbqdynm4wbz3ybyzdaa6scpyav9fyn0zjm817sl8gpnsnp89m5g"; depends=[GenomicRanges IRanges Matrix]; };
-  flowAI = derive2 { name="flowAI"; version="1.2.10"; sha256="1hwhzzjz7hwc9751p7kvs32w0nqn3yzkbwh8v7mdpfxsx7xi5pfp"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 scales]; };
-  flowBeads = derive2 { name="flowBeads"; version="1.12.0"; sha256="1zpjgk2ppcgmhlqmknsgp0wagilgdqk8mfhjnc474yrr339dwvcs"; depends=[Biobase flowCore knitr rrcov xtable]; };
-  flowBin = derive2 { name="flowBin"; version="1.10.0"; sha256="0357nin7rcapvj82c1bxmgcn6gryi8avgzqszhk264qzmlhl2kq7"; depends=[BiocGenerics class flowCore flowFP limma snow]; };
-  flowCHIC = derive2 { name="flowCHIC"; version="1.8.0"; sha256="1fvy99wql8lszd5kcp9gms111hw8mxkmdv68jl8cya3x7b113cr5"; depends=[EBImage flowCore ggplot2 hexbin vegan]; };
-  flowCL = derive2 { name="flowCL"; version="1.12.0"; sha256="0cxaixdx1i25p0vv8b6ynjb144cz6b9lyx40d0i21iv0fxvyxb37"; depends=[graph Rgraphviz SPARQL]; };
-  flowClean = derive2 { name="flowClean"; version="1.12.0"; sha256="05jnp36ar05sgy06rfd91zkjsbinag7nylz4fimkzlsfwkaya2i1"; depends=[bit changepoint flowCore sfsmisc]; };
-  flowClust = derive2 { name="flowClust"; version="3.12.2"; sha256="1hq7wmzd2jpbr8scvi7scg2y1cf5pq562fsl14i1p4112fhj88n1"; depends=[Biobase BiocGenerics clue ellipse flowCore flowViz graph MCMCpack mnormt RBGL]; };
-  flowCore = derive2 { name="flowCore"; version="1.40.6"; sha256="0r4plrqbmqhn7zlhr6c8zb969r41jsdb0v7vk730zc8bqhqnw5c0"; depends=[BH Biobase BiocGenerics corpcor graph matrixStats Rcpp rrcov]; };
-  flowCyBar = derive2 { name="flowCyBar"; version="1.10.0"; sha256="0q3lizif3mc057yfbxsm1b6l79ia3ls9iaalnsrlmxlbqk3rylcp"; depends=[gplots vegan]; };
-  flowDensity = derive2 { name="flowDensity"; version="1.8.0"; sha256="0s0zd6q5fxl40wv9fmdd6g2x8ar67ian0ihn61v95z2kgcrz2ygd"; depends=[car flowCore GEOmap gplots RFOC]; };
-  flowFP = derive2 { name="flowFP"; version="1.32.0"; sha256="010m41pbz2f5rcx6453x889mjwbx0rx37lcnfhrz3hsnzqnykdim"; depends=[Biobase BiocGenerics flowCore flowViz]; };
-  flowFit = derive2 { name="flowFit"; version="1.12.0"; sha256="1laaa4f4jbhr1ri6zakbh2wwivhq8b44xmb1yvvrjy61fqfl4d9f"; depends=[flowCore flowViz gplots kza minpack_lm]; };
-  flowMap = derive2 { name="flowMap"; version="1.12.0"; sha256="0pnq4dc364dr6wjvim5dav8399k2vwq0i7zfbjq70r8hk6d59c53"; depends=[abind ade4 doParallel Matrix reshape2 scales]; };
-  flowMatch = derive2 { name="flowMatch"; version="1.10.0"; sha256="11r1x2aicbgj5sbyinwzniv463yrpvxlm36agmspgjnq4ir1p3m7"; depends=[Biobase flowCore Rcpp]; };
-  flowMeans = derive2 { name="flowMeans"; version="1.34.0"; sha256="1jqci86yi0q5qvzhj9448gvv587kgkbx79r90957bwzj6z5nlj2z"; depends=[Biobase feature flowCore rrcov]; };
-  flowMerge = derive2 { name="flowMerge"; version="2.22.0"; sha256="07x5im2m98nszcaw4ip6l3pnd6j6nrc17amnnpxqpnbpm73hfsz6"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; };
-  flowPeaks = derive2 { name="flowPeaks"; version="1.18.0"; sha256="1211wcypqjwdv2w4pyzkmjg2c0yz18r5i4mdj114lbia6v1p1jza"; depends=[]; };
-  flowPloidy = derive2 { name="flowPloidy"; version="1.0.0"; sha256="189al2wzpr1f7haihifyfzvd42sj6nk6f305ny5v9lcr4afp3538"; depends=[car caTools flowCore knitr minpack_lm rmarkdown shiny]; };
-  flowPlots = derive2 { name="flowPlots"; version="1.22.0"; sha256="0wskj8nfi0zd7rmx0spz8l2h8xzw4qpm9qnxv7s4cq3s8spknbmp"; depends=[]; };
-  flowQ = derive2 { name="flowQ"; version="1.34.0"; sha256="0ax0m6dzfhnr0n0qnhxlhq58vrxy583c9aznczldx808xf2krx8x"; depends=[BiocGenerics bioDist flowCore flowViz geneplotter IRanges lattice latticeExtra mvoutlier outliers parody RColorBrewer]; };
-  flowQB = derive2 { name="flowQB"; version="2.2.0"; sha256="11kwv1nwzvpfppla5n3zsz64hljlrjblbcgd04hfzzqbck5d9c7w"; depends=[extremevalues flowCore]; };
-  flowStats = derive2 { name="flowStats"; version="3.32.0"; sha256="104yp7agkvr7p8ywmrqh8xy1anrvrnnwwl34pw68bl50p7dcb5qp"; depends=[Biobase BiocGenerics cluster fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS ncdfFlow]; };
-  flowTrans = derive2 { name="flowTrans"; version="1.26.0"; sha256="11h6rs6844mv5wjkr9l5hlmfv2nkwzrhg80l773mx2yllzqq84vg"; depends=[flowClust flowCore flowViz]; };
-  flowType = derive2 { name="flowType"; version="2.12.0"; sha256="1ghbxlfpc9l1cg54b898rh3p79dldhpza4qynyx2q3b0yc4hanil"; depends=[BH Biobase flowClust flowCore flowMeans flowMerge Rcpp rrcov sfsmisc]; };
-  flowUtils = derive2 { name="flowUtils"; version="1.38.0"; sha256="0rs62hbfzgb2mva7irjmnqcccn2zp3cn1177ji6faszkzsnmmz0i"; depends=[Biobase corpcor flowCore graph RUnit XML]; };
-  flowVS = derive2 { name="flowVS"; version="1.6.0"; sha256="1ivsyqrxg4xg67jgmn9rm9pmmr751bpfxqsgpx8m8cw8ywxbvm3m"; depends=[flowCore flowStats flowViz]; };
-  flowViz = derive2 { name="flowViz"; version="1.38.0"; sha256="1jrn6j2i1i6hiw4xc7s271rixz1qi4nr9awyx1dv48fnp5bhz2dd"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; };
-  flowWorkspace = derive2 { name="flowWorkspace"; version="3.20.5"; sha256="17yd6hhlmagpasp3cksza1v8g62kkl1nw8rh0jif8sxz6hlsh7jd"; depends=[BH Biobase BiocGenerics data_table dplyr flowCore flowViz graph gridExtra lattice latticeExtra ncdfFlow RBGL RColorBrewer Rcpp Rgraphviz scales stringr XML]; };
-  flowcatchR = derive2 { name="flowcatchR"; version="1.8.0"; sha256="0mzjva3vyf7xcgcr62aiy547p2ga9kv2543bwjd3f7y6ankz7cnn"; depends=[abind BiocParallel colorRamps EBImage rgl]; };
-  fmcsR = derive2 { name="fmcsR"; version="1.16.0"; sha256="05k8c8vhdq6lqgrmc8r7dqwixindwpn32hp2a52vkqny8gn9fvbg"; depends=[BiocGenerics ChemmineR RUnit]; };
-  focalCall = derive2 { name="focalCall"; version="1.8.0"; sha256="088453sxnlz76iz6fkardi3pb3z033pi4x9na6gn85sxpa53byqf"; depends=[CGHcall]; };
-  frma = derive2 { name="frma"; version="1.26.0"; sha256="1q6hfmdh1m9nifz593i70x58q877lkyx55yigw095f2pgr7ikqg5"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; };
-  frmaTools = derive2 { name="frmaTools"; version="1.26.0"; sha256="1vjdci710y9zzbnhfc1yp48bzvnzp2lrl6q6gqxc64m4xh4s0fs0"; depends=[affy Biobase DBI preprocessCore]; };
-  gCMAP = derive2 { name="gCMAP"; version="1.18.0"; sha256="1s4zdhwxpwv8ddp3914syrbmpfhryvaq2lqiyal4nhhp5nklbmlj"; depends=[annotate AnnotationDbi Biobase Category DESeq genefilter GSEABase GSEAlm limma Matrix]; };
-  gCMAPWeb = derive2 { name="gCMAPWeb"; version="1.14.0"; sha256="1wdfj1qf8d80qxj17ji863gripdxdzcldfw5s6z7jblirabsxp7j"; depends=[annotate AnnotationDbi Biobase BiocGenerics brew gCMAP GSEABase hwriter Rook yaml]; };
-  gCrisprTools = derive2 { name="gCrisprTools"; version="1.0.0"; sha256="1zqxj566hzmd1yfjrc0nfvd1djsf2vpj1jcx25c85ssssbh3if2f"; depends=[Biobase BiocParallel ggplot2 limma PANTHER_db rmarkdown RobustRankAggreg]; };
-  gQTLBase = derive2 { name="gQTLBase"; version="1.6.0"; sha256="07fas0d1ybpk9h8qf4hdhnh0gq9ip9xc4hfaxsdnk65xy2p4dvhc"; depends=[BatchJobs BBmisc BiocGenerics bit doParallel ff ffbase foreach GenomicFiles GenomicRanges rtracklayer S4Vectors SummarizedExperiment]; };
-  gQTLstats = derive2 { name="gQTLstats"; version="1.6.0"; sha256="0lpnn8992dy7bavsyym3m361sgyra54p8wz0xg25f0d4dw5bg4sq"; depends=[AnnotationDbi BatchJobs BBmisc beeswarm Biobase BiocGenerics doParallel dplyr ffbase foreach GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges ggplot2 gQTLBase IRanges limma mgcv reshape2 S4Vectors snpStats SummarizedExperiment VariantAnnotation]; };
-  gaga = derive2 { name="gaga"; version="2.20.0"; sha256="1jnbmirwxnwdyvx76gqrz4y8rx5g9llnnbz06sqjkigprians1lw"; depends=[Biobase coda EBarrays mgcv]; };
-  gage = derive2 { name="gage"; version="2.24.0"; sha256="05kdc8pqjwhi9pl0pwm4rkisrdlkkrhnj0iwwya5vakgvh3bw42d"; depends=[AnnotationDbi graph KEGGREST]; };
-  gaggle = derive2 { name="gaggle"; version="1.42.0"; sha256="1a04mzcamgw1k1s0s2n9myv9mj84lrb4mvlircnmpy6a7ag5d3lb"; depends=[graph rJava RUnit]; };
-  gaia = derive2 { name="gaia"; version="2.18.0"; sha256="10wi2i8yqrcxjs7vp2dywrj4fqvgd3sd238bvy7kj5kvr24ajfd1"; depends=[]; };
-  garfield = derive2 { name="garfield"; version="1.2.0"; sha256="09ijwqxmwq3432bkx4zi0c8h93nj3jd4jqyz5lm65hjn2slmwbfl"; depends=[]; };
-  gaucho = derive2 { name="gaucho"; version="1.10.0"; sha256="13wavb2l3bdkd3yjsd9v53wfmylq7y19q70ybncyd6qr05mzqj07"; depends=[GA graph heatmap_plus png Rgraphviz]; };
-  gcatest = derive2 { name="gcatest"; version="1.4.0"; sha256="0b365k1a8yrqnxrrm8iclgg06h1mcrbl6kfkj2rzsajg4ahx9gly"; depends=[lfa]; };
-  gcrma = derive2 { name="gcrma"; version="2.46.0"; sha256="0yr1wcf32ihjpkb4swnnf933i0sbniyjswsvx9ly4z1dv8yigjji"; depends=[affy affyio Biobase BiocInstaller Biostrings XVector]; };
-  gdsfmt = derive2 { name="gdsfmt"; version="1.10.1"; sha256="1mn7ircm2i9bfmxprbl2rdvwazngnv1jxdxpcdknl5c66j5lhzap"; depends=[]; };
-  geNetClassifier = derive2 { name="geNetClassifier"; version="1.14.0"; sha256="1z3j12y97n8bc8nc9gjfs1bbmjbbwgkwfp7g14g11p3qfhlsjyzn"; depends=[Biobase e1071 EBarrays minet]; };
-  geecc = derive2 { name="geecc"; version="1.8.0"; sha256="0yhi0a2141q93dxr26wr44724yyfh9bykr7swllql036nkdpfhvv"; depends=[gplots hypergea MASS Rcpp]; };
-  genArise = derive2 { name="genArise"; version="1.50.0"; sha256="1f8ic85955v866sqc02b5m2rk8agws80w2rv7g4j7kk5ssffrv0r"; depends=[locfit tkrplot xtable]; };
-  genbankr = derive2 { name="genbankr"; version="1.2.1"; sha256="1pcn4asxxzark6w5a188as3h5klwb6yj5varrf9lm6qdrhmdwimy"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; };
-  geneAttribution = derive2 { name="geneAttribution"; version="1.0.1"; sha256="15vbi1fax2jwbh5j82vv3qlzhkscwd9qm3ls51rgbir72m915x3a"; depends=[BiocGenerics GenomeInfoDb GenomicFeatures GenomicRanges IRanges org_Hs_eg_db rtracklayer]; };
-  geneRecommender = derive2 { name="geneRecommender"; version="1.46.0"; sha256="1ddj9w6jdbcxnzw22q8qjg6b0pydcin51h3n7l7crwa0d8wvmg6j"; depends=[Biobase]; };
-  geneRxCluster = derive2 { name="geneRxCluster"; version="1.10.0"; sha256="18h5a9yb6h7lhz4yija3vx7ca8x4mvlji659kqzy7a7prm9yqi2w"; depends=[GenomicRanges IRanges]; };
-  geneXtendeR = derive2 { name="geneXtendeR"; version="1.0.0"; sha256="104mn7rgsakc89gz3phsp00ijcw99zxbyd2q96s5ikz1c4pnf6bl"; depends=[data_table dplyr rtracklayer]; };
-  genefilter = derive2 { name="genefilter"; version="1.56.0"; sha256="1vzgciqd09csqcw9qync8blsv51ylrd86a65iadgyy6j26g01fwd"; depends=[annotate AnnotationDbi Biobase S4Vectors survival]; };
-  genefu = derive2 { name="genefu"; version="2.6.0"; sha256="0gh6n4k1b0f57w2lb1kjwymh5x8iirvrmhqlq46yybfs4928h147"; depends=[AIMS amap biomaRt iC10 limma mclust survcomp]; };
-  geneplast = derive2 { name="geneplast"; version="1.0.0"; sha256="0sxvdnw4kdr2bikibhaf538qq5adr2cv4warbpmi28wjiyzs7jy1"; depends=[ape snow]; };
-  geneplotter = derive2 { name="geneplotter"; version="1.52.0"; sha256="1p6yvxi243irhjxwm97hp73abhwampj0myyf8z00ij166674pc7h"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; };
-  genoCN = derive2 { name="genoCN"; version="1.26.0"; sha256="0v0sg2h9f3dqwydfvydbpjw37xzl2yn26244nyq8rzb1g5p30l6l"; depends=[]; };
-  genomation = derive2 { name="genomation"; version="1.6.0"; sha256="1m4mz7wihj8yqivwkzw68div8ybk4rjsai3ffki7xp7sh21ax03y"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr Rcpp readr reshape2 Rhtslib Rsamtools rtracklayer RUnit S4Vectors seqPattern]; };
-  genomeIntervals = derive2 { name="genomeIntervals"; version="1.30.1"; sha256="0kglh50x76b4n0r6cfjk63bja1d1mdf5m14k7n6jjg6glprys3j5"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; };
-  genomes = derive2 { name="genomes"; version="3.4.0"; sha256="160279nd3iybpn6v1da9yr248fac865hg0dmxq32mbdhmp591xjy"; depends=[curl readr]; };
-  genoset = derive2 { name="genoset"; version="1.30.0"; sha256="08vyiyipcnrw3r8cyk4yzynzby8gy5mn8v16s582wzc37kdj46yz"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; };
-  genotypeeval = derive2 { name="genotypeeval"; version="1.4.0"; sha256="057b36rjfcg45irl80c4rkiq2bkjyczdxvph6wyn6nfl657ki5k2"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer VariantAnnotation]; };
-  genphen = derive2 { name="genphen"; version="1.2.0"; sha256="1czigszpqrvqqyrgn8jhifqq31i7qkbm7gq2i9h9x11qr0l421p2"; depends=[Biostrings e1071 effsize ggplot2 randomForest rjags]; };
-  gespeR = derive2 { name="gespeR"; version="1.6.1"; sha256="1kk0c2hvvq1rbmkagnxsx03nd9jjnh3yci92fgb3y9vqa4gfps3n"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; };
-  ggbio = derive2 { name="ggbio"; version="1.22.4"; sha256="1kjhxhhinl5h3h3yyb1miwy4kzngmdi418awvdiimrnj3412vvrg"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; };
-  ggcyto = derive2 { name="ggcyto"; version="1.2.3"; sha256="03cb9zhpchg6ymyvp3gbma35sk81a3f7x3brkriwig74vv9x1hw5"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra ncdfFlow plyr RColorBrewer scales]; };
-  ggtree = derive2 { name="ggtree"; version="1.6.11"; sha256="0lh6wj4bkmad2wrv6lpxz0qprhwxava6w8v0y6l3930026wj01q4"; depends=[ape ggplot2 jsonlite magrittr tidyr]; };
-  girafe = derive2 { name="girafe"; version="1.26.0"; sha256="07d0j8px5zrb07agpsvhl5v1d2hdcavcqg0q57hs2jk4ysl98way"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; };
-  globalSeq = derive2 { name="globalSeq"; version="1.2.0"; sha256="1laz11w4haiq4j754krcy3hlca2rmgwgcsy4vlc89lmfrc68pfmk"; depends=[]; };
-  globaltest = derive2 { name="globaltest"; version="5.28.0"; sha256="0vxwhk6c2sxy46v7amnsgvgq4yy77z5mifb917649r0q4n3jaaaw"; depends=[annotate AnnotationDbi Biobase survival]; };
-  gmapR = derive2 { name="gmapR"; version="1.16.0"; sha256="1afxlz1z6khc16ab62chnfzkm9y0vdfrfnmkdhrsqwr68lf3dh9d"; depends=[Biobase BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; };
-  goProfiles = derive2 { name="goProfiles"; version="1.36.0"; sha256="1imwqla70j643w7h25da0f0c52szqk81z4g8vwpdpriq512d9gm9"; depends=[AnnotationDbi Biobase GO_db]; };
-  goTools = derive2 { name="goTools"; version="1.48.0"; sha256="171picf9ic0z1lbpmyy8dkvglq75dnpzj39yzxkkinkbyzlnfhm2"; depends=[AnnotationDbi GO_db]; };
-  goseq = derive2 { name="goseq"; version="1.26.0"; sha256="1xay2ay8whwsvy10wss07svc638gg4ks1qayskplvrwxkp2kg2p8"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; };
-  gpls = derive2 { name="gpls"; version="1.46.0"; sha256="1y12zzkf7knc1j8xh3kqax3jzlllwb8hyfqjnxxailad3gbxwc1x"; depends=[]; };
-  gprege = derive2 { name="gprege"; version="1.18.0"; sha256="1gjcgy0bw87rgh3j8pq3940l7g6zzmwnzvkrrfviizny0p8ynxgn"; depends=[gptk]; };
-  graph = derive2 { name="graph"; version="1.52.0"; sha256="0g3dk5vsdp489fmyg8mifczmzgqrjlakkkr8i96dj15gghp3l135"; depends=[BiocGenerics]; };
-  graphite = derive2 { name="graphite"; version="1.20.1"; sha256="1lkknnjac5m5wvkvbz02548q16h6c5jhzhi410vr4lfzcz7v201a"; depends=[AnnotationDbi graph rappdirs]; };
-  groHMM = derive2 { name="groHMM"; version="1.8.0"; sha256="0d91nyhqbi5hv3mgmr2z0g29wg2md26g0hyv5mgapmz20cd9zi4y"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; };
-  gtrellis = derive2 { name="gtrellis"; version="1.6.0"; sha256="09hds0dcs7w94gl7zm5w94kxzv09dsggn8wqibhx3a0m4h515wz7"; depends=[circlize GenomicRanges GetoptLong IRanges]; };
-  gwascat = derive2 { name="gwascat"; version="2.6.0"; sha256="11y1knppdqcnj4w0hs33g2kcpx4sy8anb2y7kjgjxrpj4wvzinz9"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 gQTLstats graph Gviz Homo_sapiens IRanges Rsamtools rtracklayer S4Vectors snpStats SummarizedExperiment VariantAnnotation]; };
-  h5vc = derive2 { name="h5vc"; version="2.8.1"; sha256="1c4scm9z1ckmp5cdc979a44vryraqq60bzgsn329aq92r0rpd4y2"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rsamtools S4Vectors]; };
-  hapFabia = derive2 { name="hapFabia"; version="1.16.1"; sha256="0j0iip9mdvksb2y83891mplmh18ajhpi6jmgrszp2kjjh3sfwicj"; depends=[Biobase fabia]; };
-  hiAnnotator = derive2 { name="hiAnnotator"; version="1.8.0"; sha256="0v0js3wkcw5dlg01g5xgj0m0rzxg86y9mxxw72jy6vr8j78wkzci"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; };
-  hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.10.0"; sha256="0krgb5139fl425vyz13vyzr1kiv06nysk511h4yiif4r4ggharif"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator readxl rSFFreader sonicLength]; };
-  hierGWAS = derive2 { name="hierGWAS"; version="1.4.0"; sha256="0gahm81v1gcwph2xm0p3il1pc3wp28z3ik8l0c8mvwwd3kn69cdw"; depends=[fastcluster fmsb glmnet]; };
-  hopach = derive2 { name="hopach"; version="2.34.0"; sha256="01rxryijz762bcf4dzha0rfmf263svy86aq7a8zxmampb39k5a62"; depends=[Biobase BiocGenerics cluster]; };
-  hpar = derive2 { name="hpar"; version="1.16.0"; sha256="19qx0abwmn7yl7ix6wad912d3xwvmrw13idvrrfwhwj481w7b2xw"; depends=[]; };
-  htSeqTools = derive2 { name="htSeqTools"; version="1.22.0"; sha256="1g0a3fmywcrsv7p2lv7r22hfvv3mbhl43yl71bp84v53r7pb95vw"; depends=[Biobase BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges MASS S4Vectors]; };
-  hyperdraw = derive2 { name="hyperdraw"; version="1.26.0"; sha256="1jvj19fq24fpj10i2gjvrb9vmf5b4wdz5xcbifkgkbwf8pb4jcci"; depends=[graph hypergraph Rgraphviz]; };
-  hypergraph = derive2 { name="hypergraph"; version="1.46.0"; sha256="0g0hk5ykbxa0kmpmlmrw8qvvkxk8hhh1jcvx0hcbqkjmld1sgfkg"; depends=[graph]; };
-  iASeq = derive2 { name="iASeq"; version="1.18.0"; sha256="16ranqshbcfmik400gwycv37h3azhksrh1hkv9s3s8kii1aydzrq"; depends=[]; };
-  iBBiG = derive2 { name="iBBiG"; version="1.18.0"; sha256="1sz6yw0n6j8gz0rwwfinckgkcrynr6zp10vlwpfkrksnpwc2qw7i"; depends=[ade4 biclust xtable]; };
-  iBMQ = derive2 { name="iBMQ"; version="1.14.0"; sha256="1g2lf38z2j5n922k7a7q5c04jz1nncyjxy7aiic305lnjmdhh91h"; depends=[Biobase ggplot2]; };
-  iCARE = derive2 { name="iCARE"; version="1.2.0"; sha256="1yq1kp0jzf8jiwf7l8chn4lmvlzfhfwc78ivdlqydrl2xarvb725"; depends=[]; };
-  iCOBRA = derive2 { name="iCOBRA"; version="1.2.0"; sha256="1nvfp09j3n689szrjlvnjhbp7bpma6b00mpkffvadcprgalb1j63"; depends=[dplyr DT ggplot2 limma reshape2 ROCR scales shiny shinyBS shinydashboard UpSetR]; };
-  iCheck = derive2 { name="iCheck"; version="1.4.0"; sha256="1vara7v0811n6d3h9b3xwbw8hd8jlxkr7mb920m5v5l86rnd798y"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d]; };
-  iChip = derive2 { name="iChip"; version="1.28.0"; sha256="00scfxyklyzpmd7yqpzh1xbq9d6drngczkvhmzklvnwcwxicw6sg"; depends=[limma]; };
-  iClusterPlus = derive2 { name="iClusterPlus"; version="1.10.0"; sha256="1qjr1d53xq4ad9d1fqx8cg0wf0br19ga1a7m7yrjmqxnjf82kfcc"; depends=[]; };
-  iGC = derive2 { name="iGC"; version="1.4.0"; sha256="1zw9lqwvnmvgj2xvq6dhi7vs1lklkfpmhxf99hqbbr6km30gjq6a"; depends=[data_table plyr]; };
-  iPAC = derive2 { name="iPAC"; version="1.18.0"; sha256="1m6c1ka7yx6ish9cw3kl683dp9zn3nbr4ii49b09lzjvxq6n2cbi"; depends=[Biostrings gdata multtest scatterplot3d]; };
-  iSeq = derive2 { name="iSeq"; version="1.26.0"; sha256="07ri9w8i57jigfs7zlz35k6qcin5pipv7c4w9k7nxlrm43n6s7nd"; depends=[]; };
-  ibh = derive2 { name="ibh"; version="1.22.0"; sha256="0k2pncvjc8zr4xxb4yqiphc8a02hsl2r2j6mflhzs7iw61z8rq4q"; depends=[simpIntLists]; };
-  idiogram = derive2 { name="idiogram"; version="1.50.0"; sha256="13jhq6bd938rsyqfl3qjzryqx9pv6z2k7bya8r0vrjrzcssnasyh"; depends=[annotate Biobase plotrix]; };
-  illuminaio = derive2 { name="illuminaio"; version="0.16.0"; sha256="0ysvblxbk3hdnd70l31f2qzg3qsrpdyix395zhqjz5hmviyy91q7"; depends=[base64]; };
-  imageHTS = derive2 { name="imageHTS"; version="1.24.0"; sha256="0c5szadgyz53r9cj14gc5r1s3wkv68pi66dlg9gnnpqyfcfpsd8y"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; };
-  immunoClust = derive2 { name="immunoClust"; version="1.6.0"; sha256="0nmgvwccfnzpfd6x6x52qgxqi56348ljpdwhylflxbd1f4szqr58"; depends=[flowCore lattice]; };
-  impute = derive2 { name="impute"; version="1.48.0"; sha256="1164zvnikbjd0ybdn9xwn520rlmdjd824vmhnl83zgv3v9lzp9bm"; depends=[]; };
-  intansv = derive2 { name="intansv"; version="1.12.0"; sha256="0djcb8yzrppbawp5dvf45cj8j3g9z95kifzyk3ndz48vr62ksaav"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; };
-  interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.12.0"; sha256="1psai99wp2d4hchfm2m7bmy9hxwz0kfl1mc9xgq57k5vq8bdq7gc"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; };
-  interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.12.0"; sha256="1gxa1sc2sk7xvxc4p74cwjkxdk3ns7igl51jg7a7086k729k3m8j"; depends=[BiocGenerics shiny]; };
-  inveRsion = derive2 { name="inveRsion"; version="1.22.0"; sha256="1f35l6gnvs5kz0v4d2dhq6mdpkvknhzadzka2m0jdhhpdk1vqkq3"; depends=[haplo_stats]; };
-  iontree = derive2 { name="iontree"; version="1.20.0"; sha256="1kvj73vzgrszvyyb0xlvc46ba58pznsczhxj8mxd6pp2sa3pjgbh"; depends=[rJava RSQLite XML]; };
-  isobar = derive2 { name="isobar"; version="1.20.0"; sha256="171a3jphxwx7n9kw77c1wng6fbv1fm5qxlwxz8n8fbnr6z4n0k2b"; depends=[Biobase biomaRt distr ggplot2 plyr]; };
-  isomiRs = derive2 { name="isomiRs"; version="1.2.0"; sha256="1dgbb9nlsjbjp06wsjnzml7laqi2353xk2pwi0kqhd6yqhrkcagz"; depends=[BiocGenerics DESeq2 DiscriMiner dplyr GenomicRanges GGally ggplot2 gplots gridExtra gtools IRanges plyr RColorBrewer readr reshape S4Vectors SummarizedExperiment tidyr]; };
-  iterativeBMA = derive2 { name="iterativeBMA"; version="1.32.0"; sha256="1pkq48a8hsalfi9w1dcyzskbwzg1ba4dw5z3y11yb9fzxh9f5y7l"; depends=[Biobase BMA leaps]; };
-  iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.32.0"; sha256="112wv08b4c3qgfd7w3a61zi1nk2va5b7ip9ayfknvj15kzrxsy9j"; depends=[BMA leaps survival]; };
-  joda = derive2 { name="joda"; version="1.22.0"; sha256="1f2a8jn9pvi1p3x9fvj78sxl5mvar0lss4zxpivqm376sz3h71hg"; depends=[bgmm RBGL]; };
-  kebabs = derive2 { name="kebabs"; version="1.8.1"; sha256="086a7z992wrj73k7zrkxk9zcz37r8bbnrdqhf4b3jvd0cwck7vib"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; };
-  keggorthology = derive2 { name="keggorthology"; version="2.26.0"; sha256="0r01hz6sra2h3irjy268y24hz0yzjzcdp8wxrj5qv103fahghjk1"; depends=[AnnotationDbi DBI graph hgu95av2_db]; };
-  kimod = derive2 { name="kimod"; version="1.2.0"; sha256="1bylbi4pwk4khhgx7ffi2sa1vqvffkmzd2c09n0pws03gpjm77ic"; depends=[Biobase cluster]; };
-  lapmix = derive2 { name="lapmix"; version="1.40.0"; sha256="1mgabcribl4jgm35ypy5rkmigzsq3vxk71i2j2jsvil48fwwpmw9"; depends=[Biobase]; };
-  ldblock = derive2 { name="ldblock"; version="1.4.0"; sha256="090f1yf30mklvq1kgqq28dsr4qy1zv4b1jp0c8m4a46115d7f57x"; depends=[Matrix snpStats]; };
-  les = derive2 { name="les"; version="1.24.0"; sha256="0736ymhiq4a6aq6439nigs475x08sw3msl4jzg5g594lbs3nxklb"; depends=[boot fdrtool gplots RColorBrewer]; };
-  lfa = derive2 { name="lfa"; version="1.4.0"; sha256="1awfqd3pmzkljn19fvflxp5q8ilncamcl3hx7ns7d4r9r98d9a3s"; depends=[corpcor]; };
-  limma = derive2 { name="limma"; version="3.30.13"; sha256="1ji8kb19anwq2505zii2kzqlrnk75mk1mpz8vy4s1mckzs1cz4m0"; depends=[]; };
-  limmaGUI = derive2 { name="limmaGUI"; version="1.50.0"; sha256="19jiqpkqcchbrsqac9l8a9zrcn37qc02586kr1n8c9fayhr91iby"; depends=[AnnotationDbi BiocInstaller gcrma limma R2HTML tkrplot xtable]; };
-  lmdme = derive2 { name="lmdme"; version="1.16.0"; sha256="033j6pz45wf9xzgjz25s9y7jyfc92srmispsy4m1apyb22gjazgs"; depends=[limma pls stemHypoxia]; };
-  logicFS = derive2 { name="logicFS"; version="1.44.0"; sha256="0j7qwgxdqq2m1ffdp78xg875xi2drlv9im8mzjc9m9mxv45fmala"; depends=[LogicReg mcbiopi]; };
-  logitT = derive2 { name="logitT"; version="1.32.0"; sha256="17r5zbf5lv13rcjlv6vw1qvqk7ha8gbqbcb957jvcdncjh1rrv72"; depends=[affy]; };
-  lol = derive2 { name="lol"; version="1.22.0"; sha256="15q0kz4xhzj75qa3qsg2fck9w9c1s0n87dlasim35i89y56kyzki"; depends=[Matrix penalized]; };
-  lpNet = derive2 { name="lpNet"; version="2.6.0"; sha256="1bfw7xp0dbx9kdg59x5jcwjwf8bjdqky6hvcpn2q4l9p6g9h72nn"; depends=[lpSolve nem]; };
-  lpsymphony = derive2 { name="lpsymphony"; version="1.2.0"; sha256="142jynr4fs70zwc3plm4wcjki6sb3ampmy6wp1cxpb92jmdavc9y"; depends=[]; };
-  lumi = derive2 { name="lumi"; version="2.26.4"; sha256="0k8d3xc1k53j0mlyy69j6dfkx9rkc305vnp72jk2k6b071ian1xw"; depends=[affy annotate AnnotationDbi Biobase DBI GenomicFeatures GenomicRanges KernSmooth lattice MASS methylumi mgcv nleqslv preprocessCore RSQLite]; };
-  mAPKL = derive2 { name="mAPKL"; version="1.6.0"; sha256="0664mnmw5v6ifkrq61z4b3m3rw10133awds70h7m074qdkwl89ad"; depends=[AnnotationDbi apcluster Biobase clusterSim e1071 igraph limma multtest parmigene reactome_db]; };
-  mBPCR = derive2 { name="mBPCR"; version="1.28.0"; sha256="1r3jv0a9xn564lmszcigpqqgfhckyjwbzzmxi632wj98cn7qj4f0"; depends=[Biobase oligoClasses SNPchip]; };
-  mQTL_NMR = derive2 { name="mQTL.NMR"; version="1.8.0"; sha256="1a1v2wylv14rz96qwqrshkf63ll54bx7h6g3y6d9fy1qdfgncwgq"; depends=[GenABEL MASS outliers qtl]; };
-  maCorrPlot = derive2 { name="maCorrPlot"; version="1.44.0"; sha256="11i2ri10gwmd6c9852z24v24f7hwcj378lmzxynrxqhz7825s1jr"; depends=[lattice]; };
-  maPredictDSC = derive2 { name="maPredictDSC"; version="1.12.0"; sha256="0rf092xaw7jw1i0p57d725x4g0827yvgl29cj6qix92ssv3fjm92"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; };
-  maSigPro = derive2 { name="maSigPro"; version="1.46.0"; sha256="0i2p236ysmhvmpbs4zc1rsxgd9z2c1633kxljsnyq7wqrkf4hx7i"; depends=[Biobase MASS mclust venn]; };
-  maanova = derive2 { name="maanova"; version="1.44.0"; sha256="094zbqwj97da540z03yxprdla3fbwwhcylpg3g92p4crnp7laaym"; depends=[Biobase]; };
-  macat = derive2 { name="macat"; version="1.48.0"; sha256="1jwqq6x9nrjyl60vpnraa4n4hp3rqqr794yh6372bqjk4ini0pph"; depends=[annotate Biobase]; };
-  made4 = derive2 { name="made4"; version="1.48.0"; sha256="1rmgyns0xvm6v7svlzbpkinc66cg0zr2h2lwsv4xnnva4zs5w8ns"; depends=[ade4 gplots RColorBrewer scatterplot3d]; };
-  maftools = derive2 { name="maftools"; version="1.0.55"; sha256="1wyapzh1zzqs0v725k24wlzfwkx0ap8dd2pxaqaxbmk6pg70vn3d"; depends=[Biostrings changepoint cometExactTest ComplexHeatmap cowplot data_table DPpackage ggplot2 ggrepel mclust NMF RColorBrewer rjson Rsamtools VariantAnnotation wordcloud]; };
-  maigesPack = derive2 { name="maigesPack"; version="1.38.0"; sha256="1g6my6nabm810q34cgrlmgdnvn93g968a7jyymgh8rs3gpj9gzgv"; depends=[convert graph limma marray]; };
-  makecdfenv = derive2 { name="makecdfenv"; version="1.50.0"; sha256="0bkkpsq5mgnkbygp3f0rvzxnmbrbd9isfbdfgq8q4ch4hwsfba28"; depends=[affy affyio Biobase zlibbioc]; };
-  manta = derive2 { name="manta"; version="1.20.0"; sha256="1gpvjmkf14jh7z5h96ixin783xaiznag1n0lp01iarz0412jvb86"; depends=[caroline edgeR Hmisc]; };
-  marray = derive2 { name="marray"; version="1.52.0"; sha256="1d242pjas4vqqcgj2cb3p66n1n9va3bqph62nyg0kr95fy2y7nf7"; depends=[limma]; };
-  maskBAD = derive2 { name="maskBAD"; version="1.18.0"; sha256="0y932wzga1crd0xrfjdap0pnji2fkaqfx68s016apx1x78k755ig"; depends=[affy gcrma]; };
-  massiR = derive2 { name="massiR"; version="1.10.0"; sha256="0qnn4cpb0xa49cxaaf7a2i87m5np1hqa6wcsxslbmvvrfik8j11b"; depends=[Biobase cluster diptest gplots]; };
-  matchBox = derive2 { name="matchBox"; version="1.16.0"; sha256="1pz8k1ygi59h4x2ykmvzqnwv44nryhqwpb3i4wg2bgm04nvd1kcz"; depends=[]; };
-  matter = derive2 { name="matter"; version="1.0.1"; sha256="1yh2lgv1dw4cf62iy5il095v6zsa64dhdrpzn31b8aw4p5y7g2hw"; depends=[biglm BiocGenerics irlba S4Vectors]; };
-  mcaGUI = derive2 { name="mcaGUI"; version="1.22.0"; sha256="0jmsf9vdv6nzqrzgmfgqvfgar9d1ziqp1qvj85pgsi1200n91rna"; depends=[bpca foreign gWidgets gWidgetsRGtk2 lattice MASS OTUbase proto vegan]; };
-  mdgsa = derive2 { name="mdgsa"; version="1.6.0"; sha256="0r1zs60922pzf7n9z1sxx7599rmq4mas0frm1931a2r9rf78dwdw"; depends=[AnnotationDbi cluster DBI GO_db KEGG_db Matrix]; };
-  mdqc = derive2 { name="mdqc"; version="1.36.0"; sha256="0fva73csci63xd4kp3nr2j3gllkkwfvp9dd0b581mfgkfa2p3khm"; depends=[cluster MASS]; };
-  meshes = derive2 { name="meshes"; version="1.0.0"; sha256="0abqbsai946lm3dj7759q6crad3xj6919vgmnm5416sjnmfvk0v2"; depends=[AnnotationDbi DOSE GOSemSim MeSH_db]; };
-  meshr = derive2 { name="meshr"; version="1.10.0"; sha256="170mpx0z9h4lxkl7b159nrbjl4vc2bdz92vfc6piwb3pmggg2r8r"; depends=[BiocGenerics Category cummeRbund fdrtool MeSH_Aca_eg_db MeSH_AOR_db MeSH_Bsu_168_eg_db MeSH_db MeSH_Hsa_eg_db MeSH_PCR_db MeSH_Syn_eg_db MeSHDbi org_Hs_eg_db S4Vectors]; };
-  messina = derive2 { name="messina"; version="1.10.0"; sha256="1q3ikcq5pxbiahycbxgviry820p8498q2nh5wbdw5aq26cv00nak"; depends=[foreach ggplot2 plyr Rcpp survival]; };
-  metaArray = derive2 { name="metaArray"; version="1.52.0"; sha256="0k9msa564981i0dc6fqsrcc3kpv58jjmkibpgn93c6966rxx76j2"; depends=[Biobase MergeMaid]; };
-  metaCCA = derive2 { name="metaCCA"; version="1.2.0"; sha256="1d57h6a2idc5zrr8kn851b8ny2rsy1yhalrz5lch9xzl7ly5n5jc"; depends=[]; };
-  metaMS = derive2 { name="metaMS"; version="1.10.0"; sha256="0f09cagf82by2wzb6gsi2wapwrgdymyhg37jnfalb00v0xhzzwwq"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; };
-  metaSeq = derive2 { name="metaSeq"; version="1.14.0"; sha256="1jm79gd1wnyrcv8cj6ymiwj5g0b4r5p7l193zfh7v2y32ki0khq8"; depends=[NOISeq Rcpp snow]; };
-  metabomxtr = derive2 { name="metabomxtr"; version="1.8.0"; sha256="1blxfg4ciad5rq1lxxj6i9hw1y7ljd60hqgp46hb2bdr97p4xq1r"; depends=[Biobase Formula multtest optimx plyr]; };
-  metagene = derive2 { name="metagene"; version="2.6.1"; sha256="0zynw4bmid9m4n2v2vxy1ybbxgag7dhhf3vsipvxwn9dxfn28ls2"; depends=[BiocParallel DBChIP GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges matrixStats muStat R6 Rsamtools rtracklayer]; };
-  metagenomeFeatures = derive2 { name="metagenomeFeatures"; version="1.4.0"; sha256="0sfh1zm2vkkw6gy4lkl21p33h530mff190mymf5ymj31g6ql44ag"; depends=[ape Biobase Biostrings dplyr lattice lazyeval magrittr metagenomeSeq purrr RSQLite ShortRead stringr]; };
-  metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.16.0"; sha256="14q96wsya19zv0ag06s9sqjq9azrh81kfim88aqvw8mp0vvc8k0x"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer]; };
-  metahdep = derive2 { name="metahdep"; version="1.32.0"; sha256="0qnimqg6zj2hq5a9ak39z3bv9da48k1191267rdbfn5rza910hwh"; depends=[]; };
-  metaseqR = derive2 { name="metaseqR"; version="1.14.0"; sha256="1h5gg9dzn91si1ir2xbv8fsf9wdih8wxl01q83279x56ghf1sy8y"; depends=[baySeq biomaRt brew corrplot DESeq EDASeq edgeR gplots limma log4r NBPSeq NOISeq qvalue rjson vsn]; };
-  methVisual = derive2 { name="methVisual"; version="1.26.0"; sha256="1dkknkr6z10i2ljfmgjb4sxn9vv46g26cf9nc7s47rbxbycjvlqw"; depends=[Biostrings ca gridBase gsubfn IRanges plotrix sqldf]; };
-  methyAnalysis = derive2 { name="methyAnalysis"; version="1.16.1"; sha256="0rhjn2ql3c5m6ayj5mmgs8fb348nbxdsn2717x44a7aj3zamn9py"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges genoset Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer SummarizedExperiment VariantAnnotation]; };
-  methylKit = derive2 { name="methylKit"; version="1.0.0"; sha256="1fxyarvz0vi4wbki70gqb1nwrmz6m7kgsvqh1am4j8m46qzv1h9a"; depends=[data_table emdbook fastseg GenomeInfoDb GenomicRanges gtools IRanges KernSmooth limma mclust qvalue R_utils Rcpp Rhtslib Rsamtools rtracklayer S4Vectors zlibbioc]; };
-  methylMnM = derive2 { name="methylMnM"; version="1.12.0"; sha256="15669zficwabd3wdl3b24q3hal7d587k5lzg8s6sr3f3f9w2lyqf"; depends=[edgeR statmod]; };
-  methylPipe = derive2 { name="methylPipe"; version="1.8.0"; sha256="1mfgxz43vxksvmwywh65q5v9jlcs5a43rb9w8zvjfgpg0zg8l46l"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; };
-  methylumi = derive2 { name="methylumi"; version="2.20.0"; sha256="02p1wwgz7w7qvsn08mw4ffrqwsi0kkahs7sdlm6ll0r7q3z03pkk"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; };
-  mgsa = derive2 { name="mgsa"; version="1.22.0"; sha256="1iwlqjs70hcgcr3m1k93xkl7xbqc9gw7k5ik9j9yhzsd7s8zxvpi"; depends=[gplots]; };
-  miRLAB = derive2 { name="miRLAB"; version="1.4.0"; sha256="0lgkm4arfc37z11ilfc0wp8m4zm1dpigr01757r82ksaxc2iqv54"; depends=[energy entropy glmnet gplots Hmisc httr impute limma pcalg RCurl Roleswitch stringr]; };
-  miRNAmeConverter = derive2 { name="miRNAmeConverter"; version="1.2.0"; sha256="0y4dmd6mlwyhi9k4nqfzg5x71k3x08cg0n4j0zrdqf5dby68yc3m"; depends=[AnnotationDbi DBI miRBaseVersions_db]; };
-  miRNApath = derive2 { name="miRNApath"; version="1.34.0"; sha256="01yb8n3i5jkpmy5ksq8lrllaspdc6lyixz7zzndzrwrk0gibph3b"; depends=[]; };
-  miRNAtap = derive2 { name="miRNAtap"; version="1.8.0"; sha256="0ap5c02m7j8mvvkxcw1mkxkwx7n8cslam1q4kj93pfpnn9bk2ll1"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; };
-  miRcomp = derive2 { name="miRcomp"; version="1.4.0"; sha256="0j07g3cvazxafvi3m0vp4rscivxydihdjkjy0fzqaxbgin2p35gj"; depends=[Biobase KernSmooth miRcompData]; };
-  microRNA = derive2 { name="microRNA"; version="1.32.0"; sha256="0yyldx2icbr36m6n0kf1f156ixm0hbjnyzrw535d36sxhy1pplpb"; depends=[Biostrings]; };
-  minet = derive2 { name="minet"; version="3.32.0"; sha256="1qk2xr88d7hc3ymg23byaqmnx3d2spddzwr81n48hwala8sy7apk"; depends=[infotheo]; };
-  minfi = derive2 { name="minfi"; version="1.20.2"; sha256="1dj88a1mv74fp9pv3iqmvqvgvr91mwdwan6qzx0svi4gh5g5hx3n"; depends=[beanplot Biobase BiocGenerics Biostrings bumphunter data_table genefilter GenomeInfoDb GenomicRanges GEOquery illuminaio IRanges lattice limma MASS matrixStats mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; };
-  mirIntegrator = derive2 { name="mirIntegrator"; version="1.4.0"; sha256="0iq3223i8hl7jsgbnzz748j253n6rjvxw374g5bk1p4b0n4dcj5v"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; };
-  missMethyl = derive2 { name="missMethyl"; version="1.8.0"; sha256="03wy0j8jr855kw87w7l4hd6cbk8n6iamyqnw0z2r9hf4dwd54v5v"; depends=[AnnotationDbi BiasedUrn GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest limma methylumi minfi org_Hs_eg_db ruv statmod stringr]; };
-  mitoODE = derive2 { name="mitoODE"; version="1.12.0"; sha256="0jcc4rzc64sadanwgrg48dcsk3ibwsxka53h3wiz3yf8mlzq605a"; depends=[KernSmooth MASS minpack_lm mitoODEdata]; };
-  mmnet = derive2 { name="mmnet"; version="1.12.0"; sha256="0fb9g4cizh0zf9gqwasygsc59njj6pffrmr5f0v96fmj3gvgfs1k"; depends=[Biobase flexmix ggplot2 igraph KEGGREST Matrix plyr RCurl reshape2 RJSONIO stringr XML]; };
-  mogsa = derive2 { name="mogsa"; version="1.8.0"; sha256="1lw39c31n1k93i9a4rdpw03s3b638yplq8xlv4n6ac4bjy14q6l6"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; };
-  monocle = derive2 { name="monocle"; version="2.2.0"; sha256="05nhkk7n6pz2p5gmr3siwawcbjmhcswqs49xx16ycf7bqj2hbfn7"; depends=[Biobase BiocGenerics cluster combinat DDRTree dplyr fastICA ggplot2 HSMMSingleCell igraph irlba limma MASS Matrix matrixStats pheatmap plyr proxy qlcMatrix reshape2 slam stringr VGAM]; };
-  mosaics = derive2 { name="mosaics"; version="2.12.0"; sha256="01fvc0qc3fd8pjh6qjf9c1k4z0427gfx2li3jd7xp05nwyfbs68d"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; };
-  motifRG = derive2 { name="motifRG"; version="1.18.0"; sha256="1pa97aj6c5f3gx4bgriw110764dj3m9h104ddi8rv2bpy41yd98d"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 IRanges seqLogo XVector]; };
-  motifStack = derive2 { name="motifStack"; version="1.18.0"; sha256="1h4qw89wqnl0r6drfi26h6jnvpjh5r45qc588g18rplgw3ckjmfz"; depends=[ade4 Biostrings grImport MotIV scales XML]; };
-  motifbreakR = derive2 { name="motifbreakR"; version="1.4.0"; sha256="14mgwligzfwlg9asdr125wzg15j1rhg29xsv58r802q6r2prgryy"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges grImport Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr TFMPvalue VariantAnnotation]; };
-  msPurity = derive2 { name="msPurity"; version="1.0.0"; sha256="0az2g69djc9kjzj10wgl0qpyyng6a8hzwa9ppwg66yj8da09x8zl"; depends=[doSNOW fastcluster foreach ggplot2 mzR plyr Rcpp reshape2 sapa stringr]; };
-  msa = derive2 { name="msa"; version="1.6.0"; sha256="0i3cx1s5gg24dyik1mclhbpiqhxakc63fiazihdxn4k0bdg8ca9p"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; };
-  msmsEDA = derive2 { name="msmsEDA"; version="1.12.0"; sha256="1l8clsma1rd322dfjr14klx0w5gjgn7fg21m4d4cyayyb44vsf1s"; depends=[gplots MASS MSnbase RColorBrewer]; };
-  msmsTests = derive2 { name="msmsTests"; version="1.12.0"; sha256="12amngakmr4h3hl0nbladynn51r2zndcd0kxkm5cyhd90rrzs18i"; depends=[edgeR msmsEDA MSnbase qvalue]; };
-  multiClust = derive2 { name="multiClust"; version="1.4.0"; sha256="1g8j8ad61njs1zbc2vrwbzp4lliapamzy9bd0cyhh520b55ziy8q"; depends=[amap cluster ctc dendextend mclust survival]; };
-  multiscan = derive2 { name="multiscan"; version="1.34.0"; sha256="12ld46bm58lr95w7v7ynyhl6mw1ws9gbdr7afjdrs7ba4313qa0j"; depends=[Biobase]; };
-  multtest = derive2 { name="multtest"; version="2.30.0"; sha256="0q302f3yf9v7mlq2kib7ynq015d5f94jrsk9drkp5vq0z5j0h3sw"; depends=[Biobase BiocGenerics MASS survival]; };
-  muscle = derive2 { name="muscle"; version="3.16.0"; sha256="0rkv1gdbpk8sss1nlq19y7p2kba8hy3dh3bx5x1rzn9cn0qn16ig"; depends=[Biostrings]; };
-  mvGST = derive2 { name="mvGST"; version="1.8.0"; sha256="19sn5rg3ny1ch5ka8agssn048wgj764cspzzj0pn3vf025qa9pbv"; depends=[annotate AnnotationDbi GO_db GOstats gProfileR graph Rgraphviz stringr topGO]; };
-  mygene = derive2 { name="mygene"; version="1.10.0"; sha256="1qir3d378plqxwkz006vi00qb1zgj2m13sjcaxcclcg59fh1fh9m"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf]; };
-  myvariant = derive2 { name="myvariant"; version="1.4.0"; sha256="0xlxcs0vqlwjqiwlycfznvj8n7sm54m3y287ndijs0461qkm2xil"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; };
-  mzID = derive2 { name="mzID"; version="1.12.0"; sha256="1zn896cpfvqp1qmq5c4vcj933hb8rxwb6gkck1wqvr7393rpqy1q"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; };
-  mzR = derive2 { name="mzR"; version="2.8.1"; sha256="0ipmhg6l3pf648rdx5g2ha7l5ppd3cja6afxhdw76x8ga3633x0r"; depends=[Biobase BiocGenerics ProtGenerics Rcpp zlibbioc]; };
-  ncdfFlow = derive2 { name="ncdfFlow"; version="2.20.2"; sha256="0s8gd6wf20zxi8vs1bl1d75rmssgvkrgrndzxn56g8cxdnyg95hl"; depends=[BH Biobase BiocGenerics flowCore flowViz Rcpp RcppArmadillo zlibbioc]; };
-  nem = derive2 { name="nem"; version="2.48.0"; sha256="00x0hb1h95dh9mg3wj89l3g2fh9hdbqlisylvmlmf7dzngcyn2c3"; depends=[boot e1071 graph limma plotrix RBGL RColorBrewer Rgraphviz statmod]; };
-  netbenchmark = derive2 { name="netbenchmark"; version="1.6.0"; sha256="1f27n82kzwwqcpx71rv824lj1h9723vf9cjcp1djh6d8jpx6yx3a"; depends=[c3net corpcor fdrtool GeneNet grndata Matrix minet PCIT pracma randomForest Rcpp]; };
-  netbiov = derive2 { name="netbiov"; version="1.8.0"; sha256="1yz9q8s1ls6944rwbmjmk6bzg0d16sxr93sw49vlzjqg1xydfc0x"; depends=[igraph]; };
-  nethet = derive2 { name="nethet"; version="1.6.0"; sha256="04kpkff1kvxq060jx1fqg5vjszipzyjlshmr23ybm40lj31nl92k"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network parcor]; };
-  netprioR = derive2 { name="netprioR"; version="1.0.0"; sha256="1ilpjkwnl81rv2xn2k3174jqp9jidm0fn4aajfybz0fbhzxi5r8k"; depends=[doParallel dplyr foreach ggplot2 gridExtra Matrix pROC sparseMVN]; };
-  netresponse = derive2 { name="netresponse"; version="1.34.0"; sha256="15gq1x7ksmr5slbbdv0cfpk5nkibpq0b6mkpda0f4rg58zq0nsb6"; depends=[dmt ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz]; };
-  networkBMA = derive2 { name="networkBMA"; version="2.12.0"; sha256="1ccs0ardxa7d6b8jlkrnrs2idbf3bg7610zwjdg3p25da1f9gpn0"; depends=[BH BMA Rcpp RcppArmadillo RcppEigen]; };
-  nnNorm = derive2 { name="nnNorm"; version="2.38.0"; sha256="1mdgbmdhqc1mjhjjhx8g0x6jy4pzza13f083c7wb9hhh7mi5w5jp"; depends=[marray nnet]; };
-  nondetects = derive2 { name="nondetects"; version="2.4.0"; sha256="06jraad50df9kw4sl44qs3km1ba4nfvqkkzf0ghmrs624msyl4xx"; depends=[Biobase HTqPCR limma mvtnorm]; };
-  normalize450K = derive2 { name="normalize450K"; version="1.2.0"; sha256="0h9dqm1n7kmaydjxhn9m9gw2kfwr98aa3nil32x32qsx9rsf5yk0"; depends=[Biobase illuminaio quadprog]; };
-  normr = derive2 { name="normr"; version="1.0.0"; sha256="0ad2nbyngpigx7gy9nnpifjcz33bd8vkpggjl80vp5w4swj9vkrp"; depends=[bamsignals GenomeInfoDb GenomicRanges IRanges qvalue Rcpp rtracklayer]; };
-  npGSEA = derive2 { name="npGSEA"; version="1.10.0"; sha256="1w4v4b53rdg4g8zw8hbcvw3z2x7i3f4kn9i68ql7f9p7ba21qr2p"; depends=[Biobase BiocGenerics GSEABase]; };
-  nucleR = derive2 { name="nucleR"; version="2.6.0"; sha256="0aa2hi3pscjypys1zf1qdzzxsxkaj7myrja3932kb2vjnydk6da7"; depends=[Biobase BiocGenerics GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; };
-  nucleoSim = derive2 { name="nucleoSim"; version="1.2.0"; sha256="0j65i9yah3v3iidrndka05rfabgah7yk2d2fg1rqkw2nkyv47shk"; depends=[IRanges S4Vectors]; };
-  nudge = derive2 { name="nudge"; version="1.40.0"; sha256="0ggbj3bjxjklw6944icgjcy3mgcly6b7d5cl68yn1cyagmdfdl63"; depends=[]; };
-  occugene = derive2 { name="occugene"; version="1.34.0"; sha256="0qavm0wkhaq2vlrbqwb5yr79251m9nxlv4kj3bhhkdf0azzjpxmp"; depends=[]; };
-  odseq = derive2 { name="odseq"; version="1.2.0"; sha256="1bf9s0vvgvq44p37396jj7wis6isj07mips52hmq299s7r5zl6gp"; depends=[kebabs mclust msa]; };
-  oligo = derive2 { name="oligo"; version="1.38.0"; sha256="1lpdqyraamyqdz9dc56xpdph4sbx7fa4ngvdg407nblbqxbyyz3d"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; };
-  oligoClasses = derive2 { name="oligoClasses"; version="1.36.0"; sha256="0cs8hkiz1rmp17hf1zsc2g1zwq7ah7x3bxbjapwgy6s12f68x2g9"; depends=[affyio Biobase BiocGenerics BiocInstaller Biostrings ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; };
-  omicade4 = derive2 { name="omicade4"; version="1.14.0"; sha256="0z6fvr4qq2bi0lpprs5fwv7lg501pgq648pd9af6w0km5ij7hrcf"; depends=[ade4 made4]; };
-  oneChannelGUI = derive2 { name="oneChannelGUI"; version="1.40.0"; sha256="0x1g8f2aw95yvkc2mr9998wk3xmrzraaw4zp95kp21avv196kswh"; depends=[affylmGUI Biobase Biostrings chimera IRanges Rsamtools siggenes tkrplot tkWidgets]; };
-  ontoCAT = derive2 { name="ontoCAT"; version="1.26.0"; sha256="1p6kgdv9h9hd87ccbvgz8l8vkmn7j9bvmq4wjvz4si5pwjghsz4l"; depends=[rJava]; };
-  openCyto = derive2 { name="openCyto"; version="1.12.1"; sha256="07nv87c578dgacld01dzvnj8sba5f6yll5d3v3754zswnl7glk4j"; depends=[Biobase clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; };
-  oposSOM = derive2 { name="oposSOM"; version="1.12.0"; sha256="1hfyr7sbwr9wyhan71mr8l22qkl5q5pm09n6rbbsy1z3wfd4yj9k"; depends=[ape Biobase biomaRt fastICA fdrtool igraph KernSmooth pixmap scatterplot3d som]; };
-  oppar = derive2 { name="oppar"; version="1.2.0"; sha256="12bdfckimhrwx0zvgjm0lq320h5b6n8a8gwj50kz75fdqg7zjw0v"; depends=[Biobase GSEABase GSVA]; };
-  pRoloc = derive2 { name="pRoloc"; version="1.14.6"; sha256="15g28asmk65vzrdm9cnq083vr7vcl76z2zw7j61mnlb73z1y3vqg"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class dendextend e1071 FNN ggplot2 gtools kernlab knitr lattice MASS mclust MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo sampling scales]; };
-  pRolocGUI = derive2 { name="pRolocGUI"; version="1.8.2"; sha256="0zw89sdy0y1hxydkglscn3xx29yna17a83w1c73ps4q30laybl6a"; depends=[Biobase dplyr DT MSnbase pRoloc scales shiny]; };
-  paircompviz = derive2 { name="paircompviz"; version="1.12.0"; sha256="0mwpgds5blylhh4ac24flzvpdp8xvky1yidmfafk002yf6pdk8i0"; depends=[Rgraphviz]; };
-  pandaR = derive2 { name="pandaR"; version="1.6.0"; sha256="13fs3qa42z9bh8wfbfbfzhzq9z2rj6436caqd1flx7m4ibbww9fc"; depends=[Biobase BiocGenerics ggplot2 hexbin igraph matrixStats plyr reshape RUnit]; };
-  panp = derive2 { name="panp"; version="1.44.0"; sha256="1pj9pgknfmrq8fnyk30hkn0mz1f3n6lv1dvvs7nywd8702wfyxhv"; depends=[affy Biobase]; };
-  parglms = derive2 { name="parglms"; version="1.6.0"; sha256="0lqzvy0q6nlzm9k3ar70mqrvlkiw2ks2fi07bqcccmspvvkd25a6"; depends=[BatchJobs BiocGenerics doParallel foreach]; };
-  parody = derive2 { name="parody"; version="1.32.0"; sha256="04n9ngqmdlm44bkhgwyk7a9rky7dcm8h3jy3m6nhz8lm6k6q72h3"; depends=[]; };
-  pathRender = derive2 { name="pathRender"; version="1.42.0"; sha256="18bdli1sbb32kdza10lzf1mfd0dwlgkmbha20bjvcpd9jxxhl79z"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; };
-  pathVar = derive2 { name="pathVar"; version="1.4.0"; sha256="17332arpxdn9sh3lknrdnjc7dlp6qzjp0px82grkvfw9nqs0d4m3"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; };
-  pathifier = derive2 { name="pathifier"; version="1.12.0"; sha256="132yhr43y88kz2qaadkw3hxbrjawk76hiy0h7y72h33zmz4l5z26"; depends=[princurve R_oo]; };
-  pathview = derive2 { name="pathview"; version="1.14.0"; sha256="1nlfh2i1gj1f35z9v95yajvpp1p60z0pgjbc9xyvdg82s58ggjvd"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; };
-  paxtoolsr = derive2 { name="paxtoolsr"; version="1.8.0"; sha256="09z7w9mp2f710y5rf83gqw490axvsg6xgqq05n44r21741rblxdf"; depends=[data_table httr igraph plyr R_utils rJava rjson XML]; };
-  pbcmc = derive2 { name="pbcmc"; version="1.2.2"; sha256="0p7gacnbgf65iz9h7hfyybyak595ykl4xlfv4jvz4hpigbq8alzc"; depends=[Biobase BiocGenerics BiocParallel cowplot genefu ggplot2 gridExtra limma reshape2]; };
-  pcaExplorer = derive2 { name="pcaExplorer"; version="2.0.0"; sha256="00zak0j907wrpr4ng6lxj4fki3lg8kgx6j8y7vxiib7dd01sw2fp"; depends=[AnnotationDbi biomaRt d3heatmap DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats IRanges knitr limma NMF pheatmap plyr rmarkdown S4Vectors scales shiny shinyAce shinyBS shinydashboard SummarizedExperiment threejs tidyr topGO]; };
-  pcaGoPromoter = derive2 { name="pcaGoPromoter"; version="1.18.0"; sha256="1xh7dwskik3q3npwhz2jgmpadh59q04hz6rd6fpph470d98213pm"; depends=[AnnotationDbi Biostrings ellipse]; };
-  pcaMethods = derive2 { name="pcaMethods"; version="1.66.0"; sha256="18mawhxw57pgpn87qha4mwki24gqja7wpqha8q496476vyap11xw"; depends=[Biobase BiocGenerics MASS Rcpp]; };
-  pcot2 = derive2 { name="pcot2"; version="1.42.0"; sha256="0rqkclr272ss61nlcay1wk0fy904bgw9rkryx236p7087kmjbasi"; depends=[amap Biobase]; };
-  pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.38.0"; sha256="1vhb37y8mfravdlvvsdnnxw3yjx6mf6x9wkj140s3bmrjyaabyxa"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; };
-  pdmclass = derive2 { name="pdmclass"; version="1.46.0"; sha256="1g88p9jrhllqxjy6043gm34h1lmyqxqyvifdlxz2afrc5h0g3rs8"; depends=[Biobase fibroEset mda]; };
-  pepStat = derive2 { name="pepStat"; version="1.8.0"; sha256="1r7a10dhicq2lhk3g1yqz6q5wv0a9dwsl7pvxzhds1ix980a4rm9"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; };
-  pepXMLTab = derive2 { name="pepXMLTab"; version="1.8.0"; sha256="0bgr2v9hj6lvwn2r1m5bfa20bxbk1zibysmr2cnzr8qxvlcpi354"; depends=[XML]; };
-  phenoDist = derive2 { name="phenoDist"; version="1.22.0"; sha256="0945wxmf1dr6hp8pjc995nhisdnzc0rjwlpkfkw93dn10gn947w8"; depends=[e1071 imageHTS]; };
-  phenoTest = derive2 { name="phenoTest"; version="1.23.1"; sha256="1nlgzzh8ddrk943vgna9ngdha60zmpn8zmbb4sxy8sya4n1z097v"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach HTSanalyzeR limma mgcv SNPchip survival xtable]; };
-  philr = derive2 { name="philr"; version="1.0.0"; sha256="0k0ck7miirmwincp1fxcmdgfbcfdvyhgpmgxv5d4nlsasr3sf9n5"; depends=[ape ggplot2 ggtree phangorn tidyr]; };
-  phyloseq = derive2 { name="phyloseq"; version="1.19.1"; sha256="19vq14gqr5wwkgbp1qdvz704ilhwvdfn7m8yzfcr6xcdxxks0gad"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; };
-  piano = derive2 { name="piano"; version="1.14.5"; sha256="1y6vy7fh23mpa2r65mhygaj27zwjl9v3khkff80lsaax0cc287s7"; depends=[Biobase BiocGenerics fgsea gplots igraph marray relations]; };
-  pickgene = derive2 { name="pickgene"; version="1.46.0"; sha256="0lcgfw8w08akrkqb74ibavav9ph5pd1daa3zbdrxkycxqxylwcmm"; depends=[MASS]; };
-  pint = derive2 { name="pint"; version="1.24.0"; sha256="1q0j037z4rq7z2yd76rnspg0xarbnblbhssm338hvh84l3kyhsvj"; depends=[dmt Matrix mvtnorm]; };
-  pkgDepTools = derive2 { name="pkgDepTools"; version="1.40.0"; sha256="1r1z4ksjjd0av85jwfvawfv4j5jkjvglf03h55zixg8iwhcgrmz1"; depends=[graph RBGL]; };
-  plateCore = derive2 { name="plateCore"; version="1.32.0"; sha256="123r9qcqan3bcqpzgw34dnrf1dgl28x01clc0j4rr61zxakapbq1"; depends=[Biobase flowCore flowStats flowViz lattice latticeExtra MASS robustbase]; };
-  plethy = derive2 { name="plethy"; version="1.12.1"; sha256="0q8xqk123rm1sj4knljaaz97hl0pshf8m7f99kggna0hc33hgz60"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; };
-  plgem = derive2 { name="plgem"; version="1.46.0"; sha256="16g433rh7avqml7dlil8hm8a1ksmgfansck26r3hcg2ic9ys1gly"; depends=[Biobase MASS]; };
-  plier = derive2 { name="plier"; version="1.44.0"; sha256="0iyazrna17qc5pk4lfxqmzwhhjxpjnli8ks6v7xf8c620ydrfdlm"; depends=[affy Biobase]; };
-  plrs = derive2 { name="plrs"; version="1.14.0"; sha256="084vc0570ccl1hbp3gjp6mdk1x6qzxipyzwdh76ffahafg1lyk5s"; depends=[Biobase BiocGenerics CGHbase ic_infer marray quadprog Rcsdp]; };
-  plw = derive2 { name="plw"; version="1.34.0"; sha256="1r5b2rpzhl5xj7477saac2j1qjdrcbdd3hrsi01hfsapczggz7sl"; depends=[affy MASS]; };
-  pmm = derive2 { name="pmm"; version="1.6.0"; sha256="19v4cbc6ws84pa5byxam3cgdbmdd6qm44m1x62iz9hsmbx38fsg6"; depends=[lme4]; };
-  podkat = derive2 { name="podkat"; version="1.6.1"; sha256="01kk7j2kvb15803dgyszjardy2mb8hii7f2c08x5whbprajx1h06"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rsamtools]; };
-  polyester = derive2 { name="polyester"; version="1.10.1"; sha256="1z011zvj1jzr2diznp528skhxafngk26i080fvyc9vpviabpbl3l"; depends=[Biostrings IRanges limma logspline S4Vectors zlibbioc]; };
-  ppiStats = derive2 { name="ppiStats"; version="1.40.0"; sha256="1ymyn5gf2879gb20q9aczw056ib5c7c0lhpap6f4iyxivz9lpbhq"; depends=[Biobase Category graph lattice ppiData RColorBrewer ScISI]; };
-  pqsfinder = derive2 { name="pqsfinder"; version="1.2.3"; sha256="0d497y179r9yk43sh03vbanv1ilpp43a0zxj33fjnmm0cfc6w8cx"; depends=[BH Biostrings GenomicRanges IRanges Rcpp S4Vectors]; };
-  prada = derive2 { name="prada"; version="1.50.0"; sha256="1nng189vl5xykba2gahmf88sb5fx9v980bhpy419anif26hx5fdl"; depends=[Biobase BiocGenerics MASS RColorBrewer rrcov]; };
-  prebs = derive2 { name="prebs"; version="1.14.0"; sha256="0jkvpa5dvgvdln8bzd3cf4i5ki3mpf7n9353x0ba482p1qk3ip5z"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; };
-  predictionet = derive2 { name="predictionet"; version="1.20.0"; sha256="0c988g47nw91rv62kc6rnxvmym7xxfr4gdlj339wy70w52yjf8vk"; depends=[catnet igraph MASS penalized RBGL]; };
-  preprocessCore = derive2 { name="preprocessCore"; version="1.36.0"; sha256="1n8y12q7145f385gm2k3c6y3vwvin7jlb47la4mnl7mar6pq9kmp"; depends=[]; };
-  proBAMr = derive2 { name="proBAMr"; version="1.8.0"; sha256="1kdaxyx0y3p4zvs589q4svb8h1xjsw2sccm3287rdj6a6wp4z5km"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer]; };
-  proFIA = derive2 { name="proFIA"; version="1.0.10"; sha256="18ncxwzgyvq4ks2y0sqvm01fsw8xfvri9h5nm0446ailjwg64mj9"; depends=[Biobase BiocParallel FNN minpack_lm pracma xcms]; };
-  procoil = derive2 { name="procoil"; version="2.2.0"; sha256="1ffjrn2fg2z48c5lrabma34zyvm75fqngndxfd4g216znyzll2dn"; depends=[Biostrings kebabs S4Vectors]; };
-  profileScoreDist = derive2 { name="profileScoreDist"; version="1.2.0"; sha256="1b1mvh6aw9k72qxjslb5qa42l70y9zz4r49kyxf48nfm8hgs2cj7"; depends=[BiocGenerics Rcpp]; };
-  prot2D = derive2 { name="prot2D"; version="1.12.0"; sha256="0pdwkyqi0lplr12ayj9rrj09xhdbm7sjn821k4ilfbnxic3lldf2"; depends=[Biobase fdrtool impute limma MASS Mulcom qvalue samr st]; };
-  proteinProfiles = derive2 { name="proteinProfiles"; version="1.14.0"; sha256="0xika21c4fadh4sxbn7kqjmmqpg85qxl3aynwfvl0qmk8xjpvdin"; depends=[]; };
-  proteoQC = derive2 { name="proteoQC"; version="1.10.0"; sha256="0396qp0jzyz1ss3ahcxbqpxgsn1rwiy87zmrfr3wl22gs44vijrv"; depends=[ggplot2 MSnbase Nozzle_R1 plyr Rcpp reshape2 rTANDEM seqinr VennDiagram XML]; };
-  psichomics = derive2 { name="psichomics"; version="1.0.8"; sha256="15v689jcc8d107cp9chzyh4bx01x5639lf474bl2ac9jlqca3mb3"; depends=[AnnotationHub data_table digest dplyr DT fastmatch highcharter httr jsonlite miscTools plyr R_utils shiny shinyBS shinyjs stringr survival Sushi XML]; };
-  psygenet2r = derive2 { name="psygenet2r"; version="1.7.4"; sha256="0553fbkbfylqk7z4rw7m4sdyddgwh5qv0rgkp0crnj0cp49cmvnc"; depends=[BgeeDB Biobase BiocInstaller biomaRt ggplot2 igraph labeling RCurl reshape2 stringr topGO]; };
-  puma = derive2 { name="puma"; version="3.16.0"; sha256="0692cvv6v58dpi0phrh5zfraw090mc83cwpnqibgi3w7kigq5zl7"; depends=[affy affyio Biobase mclust oligo oligoClasses]; };
-  pvac = derive2 { name="pvac"; version="1.22.0"; sha256="1hhd87fh688r03l15f1m8rsaglcnqm6lzkb1lg002lzm8ghnzq81"; depends=[affy Biobase]; };
-  pvca = derive2 { name="pvca"; version="1.14.0"; sha256="1z71i79hq8n139xpqvwz03r8arpscimy4p8ms77q7q3pcxb0rs94"; depends=[Biobase lme4 Matrix vsn]; };
-  pwOmics = derive2 { name="pwOmics"; version="1.6.0"; sha256="1iq3aw9l2r3fc0kv0pj70yh8c729rb39v51hcy1bc5syfasr7shr"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots igraph rBiopaxParser STRINGdb]; };
-  qcmetrics = derive2 { name="qcmetrics"; version="1.12.0"; sha256="0s2p02j1v41hg5yrryi7lf819hhfv1wrdi58wxxff4m69qzzypzg"; depends=[Biobase knitr Nozzle_R1 pander S4Vectors xtable]; };
-  qpcrNorm = derive2 { name="qpcrNorm"; version="1.32.0"; sha256="1q7w247r2ac4nqr262mc15q54ak0zdpw6a1sl0p7hiqcj1bc60f8"; depends=[affy Biobase limma]; };
-  qpgraph = derive2 { name="qpgraph"; version="2.8.3"; sha256="02isqzh92dw6xr8wjb2nigfkk5lxmywm09p5ywffx4fvjl1bvs4f"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; };
-  qrqc = derive2 { name="qrqc"; version="1.28.0"; sha256="0yl5q6c2yfizc9kaxdksc0zyl88xyy2i5m9qhcjkvzw71nlhihlj"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rsamtools testthat xtable]; };
-  qsea = derive2 { name="qsea"; version="1.0.3"; sha256="1r3b90ibhvrg98xji81rdfazvk7a2ib622dga7gvpqax0rs1np8i"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges gtools HMMcopy IRanges limma Rsamtools rtracklayer zoo]; };
-  quantro = derive2 { name="quantro"; version="1.8.0"; sha256="0y33mx9nvi7k2w6qzal2z0jav1c68m9rkiqx7g22rjhisg2vynvi"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; };
-  quantsmooth = derive2 { name="quantsmooth"; version="1.40.0"; sha256="0bxy8rj5bflk9qv672rn9yr9lmk8z5a5lakgcamisbf28s6d3qkm"; depends=[quantreg]; };
-  qusage = derive2 { name="qusage"; version="2.6.1"; sha256="1npv86c0z2ka2r3w4dydf843lhx6fsyyhxx268dnpv604rm0f662"; depends=[Biobase limma lsmeans nlme]; };
-  qvalue = derive2 { name="qvalue"; version="2.6.0"; sha256="1dijh11v1kr29gnikq09pkdvm3qwmp1a406ahx9l4j6mgn8hlsfq"; depends=[ggplot2 reshape2]; };
-  r3Cseq = derive2 { name="r3Cseq"; version="1.20.0"; sha256="039p2chdxcikjd58ighdd5vh6hp9mb3w169az0m9asrys4wgkps0"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; };
-  rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.14.0"; sha256="1a3c1yk57rmmsxwfkmgjvkfh3vs7aq71h6iwcihyvp2b15xdg8wp"; depends=[data_table XML]; };
-  rCGH = derive2 { name="rCGH"; version="1.4.0"; sha256="0hh36zfmy7284528lfgf103r7f0839hxzr2z75gmsjjvr3c4q8vb"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; };
-  rDGIdb = derive2 { name="rDGIdb"; version="1.0.0"; sha256="0ix6j1m9bcllblwivv0i3m5mns787kpzpmx8kvb8bw4qd3lb09hq"; depends=[httr jsonlite]; };
-  rGADEM = derive2 { name="rGADEM"; version="2.22.0"; sha256="1n673zr7g27fdksikk945krc539bnyvi3awabaifc57ldzj0hz1v"; depends=[Biostrings BSgenome IRanges seqLogo]; };
-  rGREAT = derive2 { name="rGREAT"; version="1.6.0"; sha256="1q56cg6crgr95myk8pd7dmrhblcm4yl0n21dy126c0h38i6q5f5i"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; };
-  rHVDM = derive2 { name="rHVDM"; version="1.40.0"; sha256="1v410qv0djpf6cd90fjaidlifxcfv3l7s925ni9q4dqk8dr8x4y3"; depends=[affy Biobase minpack_lm R2HTML]; };
-  rMAT = derive2 { name="rMAT"; version="3.24.0"; sha256="1s6lq7pc5g93qvwq79va9k6b2z2z65pf5hyya9bdjrr7q6bgd6fd"; depends=[affxparser Biobase BiocGenerics IRanges]; };
-  rRDP = derive2 { name="rRDP"; version="1.8.0"; sha256="1z8m3036sarciw69pqhl5ib7prilbbwx43xv597byq03n45fgawq"; depends=[Biostrings]; };
-  rSFFreader = derive2 { name="rSFFreader"; version="0.22.0"; sha256="1n9rzd3lpjzjbwpx1jvb68yymkr6k01y6a2jjyf7cdpdd9mpyg8s"; depends=[Biostrings IRanges S4Vectors ShortRead XVector]; };
-  rTANDEM = derive2 { name="rTANDEM"; version="1.14.2"; sha256="1c9y3lf0ksmck7zw2qm6r3mnpgrmf6gpq471bzpyx8443cs7fj7h"; depends=[data_table Rcpp XML]; };
-  rTRM = derive2 { name="rTRM"; version="1.12.0"; sha256="14ma36hx7hzaz903dzbmhzmipqlr3lnibjxr5y518wsml4ih70gi"; depends=[AnnotationDbi DBI igraph RSQLite]; };
-  rTRMui = derive2 { name="rTRMui"; version="1.12.0"; sha256="0slp9yggz7yfhpil540k6d1ppkbmmbks1ssacj6xf5h4yksc6zh8"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; };
-  rain = derive2 { name="rain"; version="1.8.0"; sha256="1gqkh3rjr3h6l8y3s9rdc1j4ivnpx1hmhnlp6ay63y99q4yxgj8c"; depends=[gmp multtest]; };
-  rama = derive2 { name="rama"; version="1.48.0"; sha256="0zmmilwhvh51fg0bi6jid27z38xr5yyqa0xa5kjwq3xh9pnrg17l"; depends=[]; };
-  randPack = derive2 { name="randPack"; version="1.20.0"; sha256="0wby3nwhj5d4r98p14qfl3p2z4rb73bbpfh68zf75gjaqvkm0j25"; depends=[Biobase]; };
-  rbsurv = derive2 { name="rbsurv"; version="2.32.0"; sha256="1n067rk8jiwf56rm22h8jfngwg75hp0xg7hlx86yzsdffpkmmbbv"; depends=[Biobase survival]; };
-  rcellminer = derive2 { name="rcellminer"; version="1.6.0"; sha256="1lmghcwrwdwknpsv2cq47yyaw09ishb0s7i29zs5c4ksvpmdhw5h"; depends=[Biobase fingerprint gplots rcdk rcellminerData shiny stringr]; };
-  readat = derive2 { name="readat"; version="1.0.0"; sha256="0l89x1pb1c8kypdh2ka9bp9jwq8j19p34qnf2zzm34361amh90wz"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_sets assertive_types Biobase data_table dplyr magrittr openxlsx pathological reshape2 stringi SummarizedExperiment testthat tidyr]; };
-  reb = derive2 { name="reb"; version="1.52.0"; sha256="1cg88gglzr5r5m0bq51fz2xabhrlk9rybvrbbdnd7ph2ss1jxkis"; depends=[Biobase idiogram]; };
-  recount = derive2 { name="recount"; version="1.0.17"; sha256="1ffvpkzafqhy75j8r39l91lrm321yq73w5a929nngk82lwwd6dcf"; depends=[BiocParallel derfinder downloader GenomeInfoDb GenomicRanges GEOquery IRanges RCurl rentrez rtracklayer S4Vectors SummarizedExperiment]; };
-  recoup = derive2 { name="recoup"; version="1.2.0"; sha256="1n5af8fbly8qdwn4ggysd01s15l26lkw9dh1mnmimhhi6wzz1brj"; depends=[BiocGenerics biomaRt circlize ComplexHeatmap GenomicAlignments GenomicRanges ggplot2 plyr rtracklayer]; };
-  regionReport = derive2 { name="regionReport"; version="1.8.2"; sha256="0q59fhxa9a1cr75c6m4qmgpxrv8q1jj0k1zm76xbj6anri5cmprd"; depends=[DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitcitations knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; };
-  regioneR = derive2 { name="regioneR"; version="1.6.2"; sha256="0mvwk2yjsdxda7w6f82dbj91i0zrr95ipglfyw9ndhl2ki8dka0i"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer]; };
-  regsplice = derive2 { name="regsplice"; version="1.0.0"; sha256="0kl8xsz4jph4jrj3yfnfaymhsrrmcxgfjjanbc3yfv6kj5pwjfcp"; depends=[BiocParallel edgeR glmnet limma S4Vectors SummarizedExperiment]; };
-  rfPred = derive2 { name="rfPred"; version="1.12.0"; sha256="1bc5rj00mlayahqb6vla9ghq15676fscj9kqagp1x6ivpgxqkl65"; depends=[data_table GenomicRanges IRanges Rsamtools]; };
-  rgsepd = derive2 { name="rgsepd"; version="1.6.0"; sha256="047svzia4f5qhcr6h0p0hfzshzmissdm9hg0pp4mfd6051nkdv5x"; depends=[AnnotationDbi biomaRt DESeq2 GO_db goseq gplots hash org_Hs_eg_db SummarizedExperiment]; };
-  rhdf5 = derive2 { name="rhdf5"; version="2.18.0"; sha256="0pb04li55ysag30s7rap7nnivc0rqmgsmpj43kin0rxdabfn1w0k"; depends=[zlibbioc]; };
-  riboSeqR = derive2 { name="riboSeqR"; version="1.8.0"; sha256="1196qh0vwnfwshccl725mbkf698dlyz4658cq7kpvyrpv56z5l90"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools]; };
-  rnaSeqMap = derive2 { name="rnaSeqMap"; version="2.32.0"; sha256="0bxlc5lwxlnlbp2qj3gsdvbrb96c9dhmp3fjdnpdcjwbvwh9a2jn"; depends=[Biobase DBI DESeq edgeR GenomicAlignments GenomicRanges IRanges Rsamtools]; };
-  rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.4.0"; sha256="1q1lsf75nbwkn91lgwkpx4lsmg94v1lbwzq7glwai4766xkvd2nb"; depends=[RColorBrewer]; };
-  roar = derive2 { name="roar"; version="1.10.0"; sha256="1hp2542vi0jqxqqin6gb5py5hvl06sn0x9ks4lb371sw0smps7ak"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges rtracklayer S4Vectors SummarizedExperiment]; };
-  rols = derive2 { name="rols"; version="2.2.5"; sha256="0xc467hd2jzdhw73a97lvj5m2hv10w06l11yrqff13gkhch4d6mi"; depends=[Biobase httr jsonlite progress]; };
-  ropls = derive2 { name="ropls"; version="1.6.2"; sha256="0piwi6l83a7lcgsv2561d71y7hm3j3g2ax6vq2h0izf6qrzj4nvy"; depends=[Biobase]; };
-  rpx = derive2 { name="rpx"; version="1.10.2"; sha256="1814f3jdmbj2yyv8ll7lfnc6bcwbv5hn9i7wydf2xzvpi2954ijr"; depends=[RCurl XML]; };
-  rqubic = derive2 { name="rqubic"; version="1.20.0"; sha256="1d5zbicb5lsqvbb0djaixi9i05q2caysa1pxnlbvf4pc3pjl2bzh"; depends=[biclust Biobase BiocGenerics]; };
-  rsbml = derive2 { name="rsbml"; version="2.32.0"; sha256="13y47fkrq80c9s0y7rrvynr6y5df9cxr0i9zxksm27fvk7bq2rzh"; depends=[BiocGenerics graph]; };
-  rtracklayer = derive2 { name="rtracklayer"; version="1.34.2"; sha256="1j3cyvg1wg1d9l0lkcjk3jn7pb96zi17nd1qsa5lglsimja19mpl"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl Rsamtools S4Vectors XML XVector zlibbioc]; };
-  sRAP = derive2 { name="sRAP"; version="1.14.0"; sha256="04nnkxb59s9qfv8kyvqc5kw8hd60c0qnpp9v8rl2iash3yng8xxb"; depends=[gplots pls qvalue ROCR WriteXLS]; };
-  sSeq = derive2 { name="sSeq"; version="1.12.0"; sha256="0pawi0svlz3cfq14f81lkvfawa5vd59cbvk4nxgwpwwk1ldxrdiq"; depends=[caTools RColorBrewer]; };
-  safe = derive2 { name="safe"; version="3.14.0"; sha256="1n2i36gg8iykcaxy4347il2hbjd4lzrygyzibj4l9a7xprfb05y0"; depends=[AnnotationDbi Biobase SparseM]; };
-  sagenhaft = derive2 { name="sagenhaft"; version="1.44.0"; sha256="1j6y4bj156szbf454m4zmlcg1idzxq2vzis2vjl5awpm0jvgz6sa"; depends=[SparseM]; };
-  sangerseqR = derive2 { name="sangerseqR"; version="1.10.0"; sha256="058la6zb2prgnf0vwy8fc4p7n13zpm1gr7fhsy4m9qknd4mdcvkz"; depends=[Biostrings shiny]; };
-  sapFinder = derive2 { name="sapFinder"; version="1.12.0"; sha256="1fybnkzjg2jfjc4qzcr96ma75389x928110a2nmq8326xknwd6f1"; depends=[pheatmap Rcpp rTANDEM]; };
-  savR = derive2 { name="savR"; version="1.12.0"; sha256="0h32mrnwls8bgq0h71vzhr29f56hpl1hgxi7sycz7hmzp9pxcfh8"; depends=[ggplot2 gridExtra reshape2 scales XML]; };
-  scater = derive2 { name="scater"; version="1.2.0"; sha256="0pambafir3aqpgk7kdq5i2pn0278d97bn2qb9712c0jivw363whf"; depends=[Biobase BiocGenerics biomaRt data_table dplyr edgeR ggbeeswarm ggplot2 limma matrixStats plyr reshape2 rhdf5 rjson shiny shinydashboard tximport viridis]; };
-  scde = derive2 { name="scde"; version="2.2.0"; sha256="1yhg9gd8qphnfk5x93hsxqhw6mc2v6kdrw1wlgb93njic0cfmv7b"; depends=[BiocParallel Cairo edgeR extRemes flexmix MASS mgcv nnet pcaMethods quantreg RColorBrewer Rcpp RcppArmadillo rjson RMTstat Rook]; };
-  scran = derive2 { name="scran"; version="1.2.2"; sha256="02jlxxm3nwgdx3v4dxw7041c4klfalpbqx0qwj25pk4f0fn9xrak"; depends=[Biobase BiocGenerics BiocParallel dynamicTreeCut edgeR Matrix scater shiny statmod zoo]; };
-  scsR = derive2 { name="scsR"; version="1.10.0"; sha256="143qn75g3kijbdx2f7yg0wxa8kakyv6w119fwnfqxgpswdgdz2hn"; depends=[BiocGenerics Biostrings ggplot2 hash IRanges plyr RColorBrewer sqldf STRINGdb]; };
-  segmentSeq = derive2 { name="segmentSeq"; version="2.8.0"; sha256="1azbyabm0nsjq45z3p6xhbxs01b5prwnq384y5yp5f6akkr3i4h7"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; };
-  seq2pathway = derive2 { name="seq2pathway"; version="1.6.0"; sha256="0rr5fzbcyc32ciyx42kahn8f9fvk7sy6055i37ql8zk5msgrsdsw"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; };
-  seqCNA = derive2 { name="seqCNA"; version="1.20.0"; sha256="0951qnwgh29w7ws7mjcsrrkavipjpryf0mf0z7bgnpzdlpvkf361"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; };
-  seqLogo = derive2 { name="seqLogo"; version="1.40.0"; sha256="18bajdl75h3039559d81rgllqqvnq8ygsfxfx081xphxs0v6xggy"; depends=[]; };
-  seqPattern = derive2 { name="seqPattern"; version="1.6.0"; sha256="0lsa5pz36xapi3yiv78k3z286a5md5sm5g21pgfyg8zmhmkxr7y8"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; };
-  seqTools = derive2 { name="seqTools"; version="1.8.0"; sha256="18ld6syl85hsdzapgbh9dp2f5prprc64yr2yi5mwrlrsjpqzix00"; depends=[zlibbioc]; };
-  seqbias = derive2 { name="seqbias"; version="1.22.0"; sha256="094scvmbcfamblqnc0k9daxym890lff1968xg2lfwfhc92sdnwyd"; depends=[Biostrings GenomicRanges Rsamtools zlibbioc]; };
-  seqplots = derive2 { name="seqplots"; version="1.12.0"; sha256="09l0sks7hzsjv8bha7ric1jhpn65ql4957lh7qg1hfd4pifyamvp"; depends=[Biostrings BSgenome class DBI digest DT fields GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges jsonlite kohonen plotrix RColorBrewer reshape2 RSQLite rtracklayer S4Vectors shiny]; };
-  sevenbridges = derive2 { name="sevenbridges"; version="1.4.9"; sha256="1cy53v8a4bsyhf84201p5fwbyjbmr2j0c3075rj0baqxydbp4fqv"; depends=[curl docopt dplyr httr jsonlite liftr miniUI objectProperties rstudioapi S4Vectors shiny stringr uuid yaml]; };
-  shinyMethyl = derive2 { name="shinyMethyl"; version="1.10.0"; sha256="0i6gjg3kjafx7pf9jkmnka33zma2ifg7kl4m71ii4a3zafy384r7"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; };
-  shinyTANDEM = derive2 { name="shinyTANDEM"; version="1.12.0"; sha256="1nay7lw325v0gfgnalypyw8dl8i5nc5dwfm3x7gk3cpz2k9f1n0f"; depends=[mixtools rTANDEM shiny xtable]; };
-  sigPathway = derive2 { name="sigPathway"; version="1.42.0"; sha256="0bk2gnsli8gnw70qmsic1244h0fpy10xv8i5nns70m9hh600rssc"; depends=[]; };
-  sigaR = derive2 { name="sigaR"; version="1.22.0"; sha256="1akjzr8h429ag2sys8kka3adrfx1b2145ag7anxyl125h2dfqh97"; depends=[Biobase CGHbase corpcor igraph limma marray MASS mvtnorm penalized quadprog snowfall]; };
-  siggenes = derive2 { name="siggenes"; version="1.48.0"; sha256="1djhghhh4rgjwrfprj376zy77pw1h52j4g5v3jz58xy47a346ila"; depends=[Biobase multtest]; };
-  sights = derive2 { name="sights"; version="1.0.0"; sha256="0j5gcpmv6g1b29a93sgmlrzvypfflk035rhbz578cl5ps9iqgbxy"; depends=[ggplot2 lattice MASS qvalue reshape2]; };
-  signeR = derive2 { name="signeR"; version="1.0.1"; sha256="05mqk99c8clv1vak4f1w6q928g49lfmlmlq4v46yfrqjkrq1acll"; depends=[BiocGenerics Biostrings BSgenome class GenomicRanges nloptr NMF PMCMR Rcpp RcppArmadillo VariantAnnotation]; };
-  sigsquared = derive2 { name="sigsquared"; version="1.6.0"; sha256="12dqrf4ffcaigrrk9rl7d66m7fk1fiinmqrjffl80viyknjvz710"; depends=[Biobase survival]; };
-  similaRpeak = derive2 { name="similaRpeak"; version="1.6.0"; sha256="11apli0ak9givkw2r9185ckkn7zp7sjq01fvhpv3szlpli5kczkm"; depends=[GenomicAlignments R6 Rsamtools rtracklayer]; };
-  simpleaffy = derive2 { name="simpleaffy"; version="2.50.0"; sha256="1gv6843dy1dzli1cvg5pl39kk8kg0cbcj4qcz4kc20n6zq6dx88q"; depends=[affy Biobase BiocGenerics gcrma genefilter]; };
-  simulatorZ = derive2 { name="simulatorZ"; version="1.8.0"; sha256="0kw54dw4sfyxns3b78n116rxxl7yfqlaslbvmiksbqj1a2gnsifk"; depends=[Biobase BiocGenerics CoxBoost gbm GenomicRanges Hmisc IRanges S4Vectors SummarizedExperiment survival]; };
-  sincell = derive2 { name="sincell"; version="1.6.0"; sha256="0hpzrigp6hppamffv0l9fn3xn187dyfbwx91az7hav04lc4slymv"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; };
-  sizepower = derive2 { name="sizepower"; version="1.44.0"; sha256="0f8gaj0l47pcamml9wbzfrrv51cpclj91cqig6pyigjwqcxahi29"; depends=[]; };
-  skewr = derive2 { name="skewr"; version="1.6.0"; sha256="1xk7vf8m90bshk3179ndis672rnvvl15p00dsfh9y4kvxz2skr4q"; depends=[IlluminaHumanMethylation450kmanifest IRanges methylumi minfi mixsmsn RColorBrewer wateRmelon]; };
-  snapCGH = derive2 { name="snapCGH"; version="1.44.0"; sha256="02dkhid7cz9lxffpnrh5d88iyvv6g23yrr14w3vpa189l6n8qvff"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; };
-  snm = derive2 { name="snm"; version="1.22.0"; sha256="01rwb8z9wbf4zw5kh7mnxj9add4r1a3fldvb5n0rir0wyr6snqg5"; depends=[corpcor lme4]; };
-  snpStats = derive2 { name="snpStats"; version="1.24.0"; sha256="1hkgjd12cz6rfm7w51dgc7cxvrsrqgc2byfinbp0d42rnc3600n2"; depends=[BiocGenerics Matrix survival zlibbioc]; };
-  soGGi = derive2 { name="soGGi"; version="1.6.1"; sha256="03bdclygsbvahgx6klmmp3bzcq70kjicrwxjbc6gmpi9gqsyf6nd"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; };
-  specL = derive2 { name="specL"; version="1.8.0"; sha256="07yp81v8ypbysfj881j97cl0qwsxy0yryyzr07by382iys9hdy4c"; depends=[DBI protViz Rcpp RSQLite seqinr]; };
-  spikeLI = derive2 { name="spikeLI"; version="2.34.0"; sha256="1qaqf4f8vpnrdriz6pplbzjl2vjfhwqgrm528p3m9w48d3s1ccyy"; depends=[]; };
-  spkTools = derive2 { name="spkTools"; version="1.30.0"; sha256="0fwz77q5xqddhxilbcrv5aq5bhw4i15b0m4bw3dsmw26m0xlwsrq"; depends=[Biobase gtools RColorBrewer]; };
-  spliceR = derive2 { name="spliceR"; version="1.16.0"; sha256="1h4bbn20cfq5ml0rdy0gn5z4bqf82v6nd3y2zylni29f2gp1j3za"; depends=[cummeRbund GenomicRanges IRanges plyr RColorBrewer rtracklayer VennDiagram]; };
-  spliceSites = derive2 { name="spliceSites"; version="1.22.1"; sha256="1fc4h0ssd0kapgmjfksf0k6zpn5z6gkfvmacgap1nqm8s4y3912z"; depends=[Biobase BiocGenerics Biostrings doBy IRanges rbamtools refGenome seqLogo]; };
-  splicegear = derive2 { name="splicegear"; version="1.46.0"; sha256="0c8h9z525qv32d60q24x9crm1aqm511fr2c9ihwq5q7wx3wzi7bq"; depends=[annotate Biobase XML]; };
-  splineTimeR = derive2 { name="splineTimeR"; version="1.2.0"; sha256="0wv0k4x6c3m2km0qkgsmb2rr1pj3mdzacqafvg3y8f8996nn4k7s"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; };
-  splots = derive2 { name="splots"; version="1.40.0"; sha256="1qby74smkq6v8lmknsinfmp4qphmndfbs9b8828h68x02j2cmp06"; depends=[RColorBrewer]; };
-  spotSegmentation = derive2 { name="spotSegmentation"; version="1.48.0"; sha256="1ia6nmhllvw19hfp7zw41n43wclmzgirbcm274l1d85nqxq0a277"; depends=[mclust]; };
-  sscore = derive2 { name="sscore"; version="1.46.0"; sha256="0s6pd5m18m90fgsaqcjwq6py886z257xz6b3xyg5zr3hqy0nzy9j"; depends=[affy affyio]; };
-  sscu = derive2 { name="sscu"; version="2.2.0"; sha256="1rhijb4wyahvjfpsz5kkmw1rxc8qj9w1f5imkzb5p59n4cj094b0"; depends=[BiocGenerics Biostrings seqinr]; };
-  ssize = derive2 { name="ssize"; version="1.48.0"; sha256="1nj2nhxf85qbpx43j2ymb25wnhd6anw3a2dgxhi3bjpx6qlngnhs"; depends=[gdata xtable]; };
-  ssviz = derive2 { name="ssviz"; version="1.8.0"; sha256="1lpf941whhmksw8y8ingaqp17687f3xkgs5rimq65px8bfpa7apq"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; };
-  staRank = derive2 { name="staRank"; version="1.16.0"; sha256="1rx4khhj24rdkx2zf5zlgx5avkpgx3qpg0ly815gbdrv7j7imx0f"; depends=[cellHTS2]; };
-  statTarget = derive2 { name="statTarget"; version="1.4.12"; sha256="0i4dq5563fkcryax1n5mhdir9w6bq72xxx2c5alb4si892c14ygr"; depends=[gWidgets2 gWidgets2RGtk2 impute pdist pls plyr pROC randomForest rrcov]; };
-  stepNorm = derive2 { name="stepNorm"; version="1.46.0"; sha256="0ns0abii8h6dxd44n9hdh7ww11mwb9izcpawxg2vwdqj5wv342qg"; depends=[marray MASS]; };
-  stepwiseCM = derive2 { name="stepwiseCM"; version="1.20.0"; sha256="0fyf4n76r8p53byapfb0fjp7dyxsy3gh2d7f4sl81hsa69zz703g"; depends=[Biobase e1071 glmpath MAclinical pamr penalized randomForest snowfall tspair]; };
-  subSeq = derive2 { name="subSeq"; version="1.4.0"; sha256="0ly7qcghf9979qmxjvd3ihs7wqys1r45x459jp3sl3skf3cnlz9m"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; };
-  supraHex = derive2 { name="supraHex"; version="1.12.0"; sha256="05jaqr98rwy02wzppbb2q77yw7yjkz7h6wd74mhd3v8dk4h7963g"; depends=[ape hexbin MASS]; };
-  survcomp = derive2 { name="survcomp"; version="1.24.0"; sha256="03232xxda6w9cxj7q84bdqjiza7y36kxk6l9n1nqawmy2kayc3kn"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; };
-  sva = derive2 { name="sva"; version="3.22.0"; sha256="1wc1fjm6dzlsqqagm43y57w8jh8nsh0r0m8z1p6ximcb5gxqh7hn"; depends=[genefilter mgcv]; };
-  switchBox = derive2 { name="switchBox"; version="1.10.0"; sha256="1avzqy2iqfzb0f6d03bhjr6fr835mwy3isga96fgxnyyca8cf81r"; depends=[gplots pROC]; };
-  switchde = derive2 { name="switchde"; version="1.0.0"; sha256="0335xxl5g3xi6g9qhhhgm6qhaqpv2dqs1579c9agz05hm5fm3r1c"; depends=[Biobase dplyr ggplot2]; };
-  synapter = derive2 { name="synapter"; version="1.16.0"; sha256="0bqldlj2fq55nlsbx0d59i8rcsja9sapx34jgm8vfrch8qng9srv"; depends=[Biobase BiocParallel Biostrings cleaver hwriter knitr lattice MSnbase multtest qvalue RColorBrewer]; };
-  synergyfinder = derive2 { name="synergyfinder"; version="1.0.0"; sha256="09vznrqz6f9db9wxralg3sb8jx8wra1d1lw5z8ywm8xfsc6jjs4s"; depends=[drc ggplot2 gplots gridBase kriging lattice nleqslv reshape2]; };
-  synlet = derive2 { name="synlet"; version="1.4.0"; sha256="18sik8k7j72sd2ix6k1qvcx44njf6rbbrj8bp6y60nzbc4z7psfk"; depends=[doBy dplyr ggplot2 magrittr RankProd RColorBrewer reshape2]; };
-  systemPipeR = derive2 { name="systemPipeR"; version="1.8.1"; sha256="0hyi841w8fm2yzpm6lwqi3jz5kc8ny8dy5p29dxynzaw5bpjw56d"; depends=[annotate BatchJobs BiocGenerics Biostrings DESeq2 edgeR GenomicFeatures GenomicRanges ggplot2 GO_db GOstats limma pheatmap rjson Rsamtools ShortRead SummarizedExperiment VariantAnnotation]; };
-  tRanslatome = derive2 { name="tRanslatome"; version="1.12.0"; sha256="0jypkql5fklqsr79hzj2fvkzkam1gxrjhkhfqjpws53bvy1f6d55"; depends=[anota Biobase DESeq edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd samr sigPathway topGO]; };
-  ternarynet = derive2 { name="ternarynet"; version="1.18.0"; sha256="14dj124wp0q5cdhmy7ywdvrzs2dpv2gwhwqmzbqazljmmjc49mzk"; depends=[igraph]; };
-  tigre = derive2 { name="tigre"; version="1.28.1"; sha256="0imsxpk0v9vwai48hmd3ndaki5z9v3yim0a3kmx3y1aym71wx68c"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; };
-  tilingArray = derive2 { name="tilingArray"; version="1.52.0"; sha256="1h1bgkc2smlxrivsqv5k92ynlcwf7gzpjlzsgaimcjvrzd6rvxcp"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; };
-  timecourse = derive2 { name="timecourse"; version="1.46.0"; sha256="0m8jlair0bzv0rw52ydv5r1bjnkdq3vxaavhbrpaqynx31lc9hqk"; depends=[Biobase limma marray MASS]; };
-  tkWidgets = derive2 { name="tkWidgets"; version="1.52.0"; sha256="1iazw1dc0xr0vdm9vlxy0awlxmdjsvc1l0g9zrqr9h1mldpi1p5x"; depends=[DynDoc widgetTools]; };
-  tofsims = derive2 { name="tofsims"; version="1.2.0"; sha256="0msmpix09ypq9gn4gh0z15caap1736zqzzda3zp8pnbjvj45jvv6"; depends=[ALS ChemometricsWithR KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; };
-  topGO = derive2 { name="topGO"; version="2.26.0"; sha256="0j6sgvam4lk9348ag6pypcbkv93x4fk0di8ivhr23mz2s2yqzwrx"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; };
-  trackViewer = derive2 { name="trackViewer"; version="1.10.2"; sha256="0a54xl7g8p6nzw6zyxchb4qinbzpfl6d7g12080lnjvkcf8dm2pj"; depends=[AnnotationDbi GenomicAlignments GenomicFeatures GenomicRanges grImport Gviz IRanges pbapply Rsamtools rtracklayer S4Vectors scales]; };
-  tracktables = derive2 { name="tracktables"; version="1.8.1"; sha256="0px4lhnz6nswih0fwqhqa37wl8j4pc33jyl2yrvi8dhfky3n4pn4"; depends=[GenomicRanges IRanges RColorBrewer Rsamtools stringr tractor_base XML XVector]; };
-  transcriptR = derive2 { name="transcriptR"; version="1.2.0"; sha256="0ny0qnwrzd9xyhjdkb6cigdsk4k0db3qivkma553zifrwrd41ja9"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; };
-  traseR = derive2 { name="traseR"; version="1.4.0"; sha256="03c33z1832rxq2h7hi69ya07708264v57h4f5xn29c0xmgd9zz7j"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; };
-  triform = derive2 { name="triform"; version="1.16.0"; sha256="18s80s90bfjz5nnm3xh0x1h2px5cq3la1x4vir1g3bgbqgmmfrrm"; depends=[BiocGenerics IRanges yaml]; };
-  trigger = derive2 { name="trigger"; version="1.20.0"; sha256="1yg6vcsqccfdd6im5xfa7m5zcm2l1iyd46bj4zfc4fjwbgqw833p"; depends=[corpcor qtl qvalue sva]; };
-  trio = derive2 { name="trio"; version="3.12.0"; sha256="1wdjapmj8wxgjg6c201jx14c1gakgr79x8xdszw8kwpnb5ih9byn"; depends=[]; };
-  triplex = derive2 { name="triplex"; version="1.14.0"; sha256="0bxxs37iia281k4y94bs0n356xpfw9wvxzzwj8pyqp2gdw876yhj"; depends=[Biostrings GenomicRanges IRanges S4Vectors XVector]; };
-  tspair = derive2 { name="tspair"; version="1.32.0"; sha256="1vicp69g5ykvqxpp00rgmnvgg87ra40wyvlnb9gj3xy3g9ixqj8g"; depends=[Biobase]; };
-  tweeDEseq = derive2 { name="tweeDEseq"; version="1.20.0"; sha256="0n6g74088ikbnfzzmiq60r3l51rch51krc05zzjg2vw1gx5zschn"; depends=[cqn edgeR limma MASS]; };
-  twilight = derive2 { name="twilight"; version="1.50.0"; sha256="0d84xcvpr7y1c6mr4z9dnp2bck52dzw7xbf99dwmj20vxq9d424r"; depends=[Biobase]; };
-  tximport = derive2 { name="tximport"; version="1.2.0"; sha256="1k5a7dad6zqg936s17f6cmwgqp11x24z9zhxndsgwbscgpyhpcb0"; depends=[]; };
-  uSORT = derive2 { name="uSORT"; version="1.0.0"; sha256="14bb5sfl0fwmg1g214dqk4i3daqxay0jkcw7a3wlh6a61dcrcfbl"; depends=[Biobase BiocGenerics cluster fpc gplots igraph Matrix monocle plyr RANN RSpectra VGAM]; };
-  unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.10.0"; sha256="108rrifxbk9g06ssfa4jx73j6r0r5d1xaagk071c6zi4a09pa3hh"; depends=[BiocGenerics HTqPCR]; };
-  variancePartition = derive2 { name="variancePartition"; version="1.4.2"; sha256="0iidrw8pcrd6c7z5sdff163108q493im8csikl1ahiyz1dxwfhw8"; depends=[Biobase colorRamps doParallel foreach ggplot2 gplots iterators limma lme4 MASS pbkrtest reshape2]; };
-  vbmp = derive2 { name="vbmp"; version="1.42.0"; sha256="0dqk8lgnib6if2j4j03zl59yc1g97457ib97ayycws9l56amf135"; depends=[]; };
-  viper = derive2 { name="viper"; version="1.8.0"; sha256="1wnaqfm6lds9qb6dqqrv8k8asbvgfimnkg4q7czv9bk30b9820i5"; depends=[Biobase e1071 KernSmooth mixtools]; };
-  vsn = derive2 { name="vsn"; version="3.42.3"; sha256="0mgl0azys2g90simf8wx6jdwd7gyg3m4pf12n6w6507jixm2cg97"; depends=[affy Biobase ggplot2 lattice limma]; };
-  vtpnet = derive2 { name="vtpnet"; version="0.14.0"; sha256="0w52411h0w3bidgcqxanw8f4j2053iff2dfc3qzaiaxj6gfcbf4p"; depends=[doParallel foreach GenomicRanges graph gwascat]; };
-  wateRmelon = derive2 { name="wateRmelon"; version="1.18.0"; sha256="1jl8h5xdppnvb8zfj103858dh6lr9w20r64y769wg1kpd3zxvxfw"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; };
-  wavClusteR = derive2 { name="wavClusteR"; version="2.8.0"; sha256="013931vz9xz12vz27i15lr63sgmc95krqkx9kz0nsmfs458c6qfz"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr wmtsa]; };
-  waveTiling = derive2 { name="waveTiling"; version="1.16.0"; sha256="0234jqsc1q2na8x0cnfc8lm52hyqakmp0bc377d6cfgzcdp7racg"; depends=[affy Biobase Biostrings GenomeGraphs GenomicRanges IRanges oligo oligoClasses preprocessCore waveslim]; };
-  weaver = derive2 { name="weaver"; version="1.40.0"; sha256="0zvhiasy3s428xy0n0fk0601dbs7fgwpqmp90fbq26aj4gfxy5vg"; depends=[codetools digest]; };
-  webbioc = derive2 { name="webbioc"; version="1.46.0"; sha256="0alxpikfnfhsfjkkj8cz27x661r8gwvwvxnzndvzbw5smnyklac5"; depends=[affy annaffy Biobase BiocInstaller gcrma multtest qvalue vsn]; };
-  widgetTools = derive2 { name="widgetTools"; version="1.52.0"; sha256="1jj18mkaq8fc5zdaf1l1vvs9barx9b5wp0qa8rvx3j6zacdlbw2r"; depends=[]; };
-  xcms = derive2 { name="xcms"; version="1.50.1"; sha256="0gr59vn52cmpsqlbqlr55a6rfwq0sk2gqnba1fhyfjd22cbghxm8"; depends=[Biobase BiocGenerics BiocParallel lattice MassSpecWavelet multtest mzR plyr ProtGenerics RANN RColorBrewer S4Vectors]; };
-  xmapbridge = derive2 { name="xmapbridge"; version="1.32.0"; sha256="02fm6sy5ynq450pkcf1zlwj2ih6f48pishmhia2d5is5iy22acbh"; depends=[]; };
-  xps = derive2 { name="xps"; version="1.34.0"; sha256="1hrprdnqyy7rrvrzsnm9sy75q31zgxy134v4zbivya8f30dap4x8"; depends=[]; };
-  yamss = derive2 { name="yamss"; version="1.0.4"; sha256="0dirg1nl2bp1xr0m10yzckhwynxl6p6jmvb5s5b03g66m4a7i72p"; depends=[BiocGenerics data_table EBImage IRanges limma Matrix mzR S4Vectors SummarizedExperiment]; };
-  yaqcaffy = derive2 { name="yaqcaffy"; version="1.34.0"; sha256="0wv52qnds4ni2a1p7m54ihdwiqxzdyvq0fb5dzjcq41abnkpiqsi"; depends=[simpleaffy]; };
-  yarn = derive2 { name="yarn"; version="1.0.1"; sha256="1ra8b711inispl3in1ajjwkyxax6w9w5nb9w47iacyk7kp6vi3a3"; depends=[Biobase biomaRt downloader edgeR gplots limma matrixStats preprocessCore quantro RColorBrewer readr]; };
-  zlibbioc = derive2 { name="zlibbioc"; version="1.20.0"; sha256="0hbk90q5hl0fycfvy5nxxa4hxgglag9lzp7i0fg849bqygg5nbyq"; depends=[]; };
+  ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.8.0"; sha256="0l2zn5hqbab30lnzk856iki51jn4l9na7jdagibhvf777v5jcz51"; depends=[ABAData data_table gplots gtools Rcpp]; };
+  ABSSeq = derive2 { name="ABSSeq"; version="1.32.3"; sha256="05pcn9p24nifz10a9pzrwkmsps8yhrr214yryypapshghb7kmz76"; depends=[limma locfit]; };
+  ABarray = derive2 { name="ABarray"; version="1.46.0"; sha256="19m6qlcvylz8qgvcagsnir0pjhdyl4axdfj9q53q9ff1iraw6qwj"; depends=[Biobase multtest]; };
+  ACME = derive2 { name="ACME"; version="2.34.0"; sha256="1n7scyw5lklzaprmy6dy0qim1ypwpvfrzzgczkby1dljk0pd4i16"; depends=[Biobase BiocGenerics]; };
+  ADaCGH2 = derive2 { name="ADaCGH2"; version="2.18.0"; sha256="02imx6x2hcb3bk6qwgwmwsv22dbbl1a6iyk35paqflsk1kdbn9fx"; depends=[aCGH bit cluster DNAcopy ff ffbase GLAD snapCGH tilingArray waveslim]; };
+  AGDEX = derive2 { name="AGDEX"; version="1.26.0"; sha256="0qy9zihx8bqz343h2wk3iy5j71142r11a2862lz5sj05h94kxy0i"; depends=[Biobase GSEABase]; };
+  AIMS = derive2 { name="AIMS"; version="1.10.0"; sha256="1c3mq7lm91779w27c35ych1sp5rcja75zim9a267qc0pqa4xlzv2"; depends=[Biobase e1071]; };
+  ALDEx2 = derive2 { name="ALDEx2"; version="1.10.0"; sha256="0q63sfnm4h6w6yhv55m87884ym60g1q1qnd82fqx6vlh4nssvz53"; depends=[BiocParallel GenomicRanges IRanges multtest S4Vectors SummarizedExperiment]; };
+  AMOUNTAIN = derive2 { name="AMOUNTAIN"; version="1.4.0"; sha256="0zgl47x8bvdsngq5sp0iq4ssx4skn81l85fspfwl3qyvr4y3r91r"; depends=[]; };
+  ANF = derive2 { name="ANF"; version="1.0.0"; sha256="0s39mh0xbrr3kkack6n48jfwg2b0nrqilm2q0v64rf7jpfn6gj11"; depends=[Biobase igraph MASS RColorBrewer survival]; };
+  ARRmNormalization = derive2 { name="ARRmNormalization"; version="1.18.0"; sha256="1gy2r863g21phwba59ksf9rp3azgy18f9cslka0l4kxckk701n85"; depends=[ARRmData]; };
+  ASAFE = derive2 { name="ASAFE"; version="1.4.0"; sha256="13vdv961i48lhkmaxnpg33j628h5a8b6f7s5anvgxskv2b0dzzz7"; depends=[]; };
+  ASEB = derive2 { name="ASEB"; version="1.22.0"; sha256="0pry207kvczv9ihs7vcq1ljhll4i3grn08wprip9n9yy1xy4w2xj"; depends=[]; };
+  ASGSCA = derive2 { name="ASGSCA"; version="1.12.0"; sha256="1b7i4qwajvv5dmn1qn5k0azv3ad5kxjkwnwsgvjlh7m573shdpxk"; depends=[MASS Matrix]; };
+  ASSET = derive2 { name="ASSET"; version="1.16.0"; sha256="12863h5f7ib3p26ghim2h0l7zn51y3624rihsybj5lpycnxkam9q"; depends=[MASS msm mvtnorm rmeta tmvnsim]; };
+  ASSIGN = derive2 { name="ASSIGN"; version="1.14.0"; sha256="12g1dh35azv1z5bc7n7gyr0vnyyi2r2jrvi6x0gyikbdszxwfysx"; depends=[ggplot2 gplots msm Rlab sva]; };
+  ASpli = derive2 { name="ASpli"; version="1.4.0"; sha256="19v9p4brgrzijin759n1q8zjrlksrzhmczi1nwhsjgbg47f35vs7"; depends=[AnnotationDbi BiocGenerics BiocStyle edgeR GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges Rsamtools S4Vectors]; };
+  ATACseqQC = derive2 { name="ATACseqQC"; version="1.2.8"; sha256="11l1cpfcadhdrcy5qdmq9gd18if8rs5xw4b5m0ky8gxgxmfpd2wq"; depends=[BiocGenerics Biostrings BSgenome ChIPpeakAnno GenomeInfoDb GenomicAlignments GenomicRanges GenomicScores IRanges limma motifStack randomForest Rsamtools rtracklayer S4Vectors]; };
+  AUCell = derive2 { name="AUCell"; version="1.0.0"; sha256="0b6az665vpdkp82xcr4xgric3nw9204g47rj4316s30l5w5l1j2v"; depends=[data_table GSEABase mixtools R_utils SummarizedExperiment]; };
+  AffyCompatible = derive2 { name="AffyCompatible"; version="1.38.0"; sha256="1lxxpldgrsl0nf63cfhbqpraylfb3118y4j8q4xknr7x8pj95gns"; depends=[Biostrings RCurl XML]; };
+  AffyExpress = derive2 { name="AffyExpress"; version="1.44.0"; sha256="0nwvgkh9nc9gag9dh85g3x4d5125p00c9jc55knpr11jraj2xifw"; depends=[affy limma]; };
+  AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.24.0"; sha256="197rrlkxmynh8fy1xzmh68d2kygpdw7kkrysar3nsikl051yl6vb"; depends=[affy]; };
+  AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.28.0"; sha256="0yx9pz9641hi9g67nkhlngz4hbykbp2g4p0xji90jjw6ajf28qwa"; depends=[affy affycoretools Biobase limma preprocessCore]; };
+  AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.16.0"; sha256="0plqdj4828v9icn958f7isrdpvqwk2smxacv6qpd35dzlpmlrpgh"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra nlme Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; };
+  AnalysisPageServer = derive2 { name="AnalysisPageServer"; version="1.12.0"; sha256="1spasp0r91lbrc6l0qjadv1yg1m1659dkc2pm1mf09bpplbsagf1"; depends=[Biobase graph log4r rjson]; };
+  Anaquin = derive2 { name="Anaquin"; version="2.2.0"; sha256="0j9f3ck23g9s09lf2adbds5pxnf9i0ji06x30gpi1dcakrs6izf2"; depends=[DESeq2 ggplot2 knitr locfit plyr qvalue ROCR]; };
+  AneuFinder = derive2 { name="AneuFinder"; version="1.6.0"; sha256="07mwfzpv9ya9ma74n993pihjhi10pjpnzbx1bfvk55h4mcyl7r7c"; depends=[AneuFinderData bamsignals BiocGenerics Biostrings cowplot DNAcopy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 ggrepel IRanges mclust ReorderCluster reshape2 Rsamtools S4Vectors]; };
+  AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.40.0"; sha256="1dh4qs1a757n640gs34lf6z2glc96nan86x0sqaw5csadl2rhnlc"; depends=[Biobase BiocGenerics DBI IRanges RSQLite S4Vectors]; };
+  AnnotationFilter = derive2 { name="AnnotationFilter"; version="1.2.0"; sha256="04zf864c1fvdlaay2r5cn30fc1n5i3czh31fs62qlrvs61wjiscs"; depends=[GenomicRanges lazyeval]; };
+  AnnotationForge = derive2 { name="AnnotationForge"; version="1.20.0"; sha256="01vbrf76vqfvxh6vpfxkjwccxggnha3byqzj333glqz2b6kwx5q1"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; };
+  AnnotationFuncs = derive2 { name="AnnotationFuncs"; version="1.28.0"; sha256="1g6y7bwk573yaays0fmlicxq2452sli0kv41bq8sh4ja2l5jh5i6"; depends=[AnnotationDbi DBI]; };
+  AnnotationHub = derive2 { name="AnnotationHub"; version="2.10.1"; sha256="14v8g44a6zg9j2rwn9x9y8509k0wr2cw8yccliz24glplb40wva4"; depends=[AnnotationDbi BiocGenerics BiocInstaller curl httr interactiveDisplayBase RSQLite S4Vectors yaml]; };
+  AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.8.0"; sha256="1nsai8a2vf5jwczd4k3vbdd9xbn6dfg6dydvf4byklxj6pk6vi97"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocInstaller biocViews Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges GEOquery IRanges jsonlite OrganismDbi rBiopaxParser RCurl Rsamtools RSQLite rtracklayer S4Vectors XML]; };
+  ArrayExpress = derive2 { name="ArrayExpress"; version="1.38.0"; sha256="01kb4322pfl9w6za6glb777hdyc8j36xs6flz3b11n1mjryipz7c"; depends=[Biobase limma oligo XML]; };
+  ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.28.0"; sha256="04qnxgywyxww8xd6r8vgy8sglbixd25749dmbsw0wgqk6zcgysim"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops DESeq edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; };
+  ArrayTV = derive2 { name="ArrayTV"; version="1.16.0"; sha256="1hn5dngk4civwzx1w2py1n9g1k1jv3kwrj6z6ysvfsfi4q668341"; depends=[DNAcopy foreach oligoClasses S4Vectors]; };
+  ArrayTools = derive2 { name="ArrayTools"; version="1.38.0"; sha256="0dyd3qwc0x25m66wqd3az8l0mabiw13j5wx2f620psyq0y5ghlkd"; depends=[affy Biobase limma xtable]; };
+  AtlasRDF = derive2 { name="AtlasRDF"; version="1.11.0"; sha256="1n52s6saydhh5j5kki9zkilhlxd8nn8463988gyr1jsb4g6fdljv"; depends=[hash SPARQL]; };
+  BAC = derive2 { name="BAC"; version="1.38.0"; sha256="04s7fbb8b4is97alj64p86jnh1lgf4a0n02wg3g9rvd75jxmzbai"; depends=[]; };
+  BADER = derive2 { name="BADER"; version="1.16.0"; sha256="05p006rqydnvz5a8gdbara9fsyn51b5flc05j593bvvlmkc6anl5"; depends=[]; };
+  BAGS = derive2 { name="BAGS"; version="2.18.0"; sha256="1qhmrz6ffhhsbnmcc0xmb64psv50b1jd1gxkjhhv479mcfl6mk06"; depends=[Biobase breastCancerVDX]; };
+  BASiCS = derive2 { name="BASiCS"; version="1.0.0"; sha256="15yby5dz0hizr76bpa5clrpfh1ycvpkk11i7y7ak164ikzxvvmd9"; depends=[BiocGenerics coda data_table KernSmooth matrixStats Rcpp RcppArmadillo S4Vectors scran SingleCellExperiment SummarizedExperiment testthat]; };
+  BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.8.0"; sha256="0fv5gyzfv0093dlyrlci9d88fcb0ifgljxwivrxpkbbsll5vrpxh"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; };
+  BCRANK = derive2 { name="BCRANK"; version="1.40.0"; sha256="0vbjskazhm5v4lmwdc456r5vl2v848ldqrzbdjrdxjlvd72wfprw"; depends=[Biostrings]; };
+  BEAT = derive2 { name="BEAT"; version="1.16.0"; sha256="0x4k45qgzwv6m00zq1jhbhc2aa5slgg5p4g8g909vajc75fpp6g7"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; };
+  BEclear = derive2 { name="BEclear"; version="1.10.0"; sha256="1skkqzph89lx9cwlgyd2xmn1808sn5byfa8mqdq6w60j6vwplpzn"; depends=[Matrix snowfall]; };
+  BGmix = derive2 { name="BGmix"; version="1.38.0"; sha256="1778bm1hx8bw00n0l3d5jvfldc7hqmpg2w1nbsc3c017rd1l2ryk"; depends=[KernSmooth]; };
+  BHC = derive2 { name="BHC"; version="1.30.0"; sha256="0j8sb6ifq2nxvlarm1zqa89yzfs3si4w43ily9nnbmlnhngr6d0m"; depends=[]; };
+  BLMA = derive2 { name="BLMA"; version="1.3.2"; sha256="1dwhhqsvah7ds7v2jd2khkabcg7222g2bfi0q5dd1xqkd15mq0j3"; depends=[Biobase graph GSA limma PADOG ROntoTools]; };
+  BPRMeth = derive2 { name="BPRMeth"; version="1.4.0"; sha256="0b7p2z69zjxrza2qfgpg6dfk96r9gfjm3v4qzafjy0hrbcfi2d74"; depends=[assertthat data_table doParallel e1071 earth foreach GenomicRanges IRanges MASS randomForest S4Vectors]; };
+  BRAIN = derive2 { name="BRAIN"; version="1.24.0"; sha256="0cxci3clyz98r8vx6cq49ypc3s3bkhx8rx0h60r54va6gbp1j2lm"; depends=[Biostrings lattice PolynomF]; };
+  BSgenome = derive2 { name="BSgenome"; version="1.46.0"; sha256="1jbzq7lm2iajajn2bifxnkss0k9fdvgqr30mral17cbhp5f6w4lq"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors XVector]; };
+  BUMHMM = derive2 { name="BUMHMM"; version="1.2.0"; sha256="00w730jxdl83sm385a63d35b2gfxlxj0jlj85xa3li5w94cwpb07"; depends=[Biostrings devtools gtools IRanges stringi SummarizedExperiment]; };
+  BUS = derive2 { name="BUS"; version="1.34.0"; sha256="07hm54q8db209xc9sfj3w0dbrd7fqdzzs1083dwabfmrgwq69ivn"; depends=[infotheo minet]; };
+  BaalChIP = derive2 { name="BaalChIP"; version="1.4.0"; sha256="1zaknwb718hpvlrwxfan7xyd3mm7iim3mffsc2d7gfxd5s3fa4q3"; depends=[coda doBy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools scales]; };
+  BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.6.0"; sha256="04wl2s36ji1qdxm5x1nvmb9licb65hdfch319zvhinvsr04nig6i"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; };
+  BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.22.0"; sha256="1pck2mnb9ik3lz88xn9g1rgaww1k4khv55fab920gk7plcj9fqvp"; depends=[RCurl RJSONIO]; };
+  Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.14.0"; sha256="1xylz923wn9n9cw19hlyrgq3rrf8r172jhi9a3gqlw3bmzhxh7h0"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; };
+  BasicSTARRseq = derive2 { name="BasicSTARRseq"; version="1.6.0"; sha256="1qx0zfxy8xi2djmk8b6fbbipv64gdp9b85acy3z4z9dnsq80qps1"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges S4Vectors]; };
+  BatchQC = derive2 { name="BatchQC"; version="1.6.1"; sha256="1fjin9j6gzxkb9zif2wk56w6axb9ld104p8kly0ld2b3l73knnid"; depends=[corpcor d3heatmap ggvis gplots knitr limma Matrix matrixStats MCMCpack moments pander reshape2 rmarkdown shiny sva]; };
+  BayesKnockdown = derive2 { name="BayesKnockdown"; version="1.4.0"; sha256="1dkch2md8fi23i3pg90rzxy185v6953jhz4l2icgglxhp15ydmfp"; depends=[Biobase]; };
+  BayesPeak = derive2 { name="BayesPeak"; version="1.30.0"; sha256="1f8r1z7mmh40nrfqj1b3drjli6zb6hm645a9xi39claid2kvfh9z"; depends=[IRanges]; };
+  BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.30.0"; sha256="153ks6bbhqzdkl88wvszjg5f67hr0gnf1mnhn6crq7i3pjy1jw0m"; depends=[]; };
+  BgeeDB = derive2 { name="BgeeDB"; version="2.4.0"; sha256="1jha16jqbj5jzanky16ihn0sqvx0k50hh1p5xw1m4ssi86dnx42x"; depends=[Biobase data_table digest dplyr graph RCurl tidyr topGO]; };
+  BiGGR = derive2 { name="BiGGR"; version="1.14.0"; sha256="1frxzj99qh94ll1xsvvnmgnfai7wfzchsqdrk2s0cp7z40yng13b"; depends=[hyperdraw hypergraph LIM limSolve rsbml stringr]; };
+  BiRewire = derive2 { name="BiRewire"; version="3.10.0"; sha256="08z2h5fq1nm192s2vwzv1q6sp82axkk81p05bib71wl5vg0j5fpk"; depends=[igraph Matrix slam tsne]; };
+  BiSeq = derive2 { name="BiSeq"; version="1.18.0"; sha256="0277lknj60gniwx4vr3ffd46gldzgjr7lbw8xy5xzdd0wa45wanz"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; };
+  BicARE = derive2 { name="BicARE"; version="1.36.0"; sha256="1ikjnpg1j7pk6y9jm0p8y28aqrq37xryhj3qnksphwvwwj533xi2"; depends=[Biobase GSEABase multtest]; };
+  BioCor = derive2 { name="BioCor"; version="1.2.1"; sha256="0f6r23imyldfacxacmici1r918b700w2i8fmd69d36bvykra59xs"; depends=[BiocParallel Matrix]; };
+  BioMVCClass = derive2 { name="BioMVCClass"; version="1.46.0"; sha256="08f8zcmncbmbhrm3y9i8wvjfivskhp8580rcndkcc82wd5g8fqdc"; depends=[Biobase graph MVCClass Rgraphviz]; };
+  BioMedR = derive2 { name="BioMedR"; version="1.1.0"; sha256="1wdszvk1qkwpfzxghbjz0zvh5zxf1wkd2f29f4hjxh09dkza49r0"; depends=[Biostrings ChemmineOB ChemmineR doParallel fmcsR foreach GOSemSim org_Hs_eg_db pls randomForest rcdk RCurl rjson]; };
+  BioNet = derive2 { name="BioNet"; version="1.38.0"; sha256="1pbi461aly08vy16sbakx249q01pyn3iwnp6xbdyi45gr1x9g3c0"; depends=[AnnotationDbi Biobase graph igraph RBGL]; };
+  BioQC = derive2 { name="BioQC"; version="1.6.0"; sha256="1lrvynzh38h62ikzig6b5fq1j738d0rrpb9bgj1lm1rwf9bbdgvs"; depends=[Biobase Rcpp]; };
+  BioSeqClass = derive2 { name="BioSeqClass"; version="1.36.0"; sha256="0drgj7dhx87qspqwrxhmjiycvz2vn14kh9wx5g0r7qimvkga9lgr"; depends=[Biobase Biostrings class e1071 foreign ipred klaR nnet party randomForest rpart scatterplot3d tree]; };
+  Biobase = derive2 { name="Biobase"; version="2.38.0"; sha256="1cgm1ja1kp56zdlzyy9ggbkfn8r2vbsd4hncmz8g4hjd47fg18kg"; depends=[BiocGenerics]; };
+  BiocCaseStudies = derive2 { name="BiocCaseStudies"; version="1.40.0"; sha256="0hwmqv8nimc8gl1c5a72ckmgag5j8886ab62i1irlkfis5x2rj8m"; depends=[Biobase]; };
+  BiocCheck = derive2 { name="BiocCheck"; version="1.14.0"; sha256="1nzp8kgw13z9pgf885rplj6k37jcldfhbz0adqclxr2gq0yalmyx"; depends=[BiocInstaller biocViews codetools graph httr optparse stringdist]; };
+  BiocFileCache = derive2 { name="BiocFileCache"; version="1.2.2"; sha256="111rrzz366kmqs1v8jx5ck0kb0xs42f250m5i0sn65ypvg9ag504"; depends=[DBI dbplyr dplyr httr rappdirs RSQLite]; };
+  BiocGenerics = derive2 { name="BiocGenerics"; version="0.24.0"; sha256="03wxvhxyrhipbgcg83lqlfn7p9gbzzrnl48y0dq7303xgp232zai"; depends=[]; };
+  BiocInstaller = derive2 { name="BiocInstaller"; version="1.28.0"; sha256="19fga27bv6q9v5mpil74y76lahmnwvpg2h33rdx1r79nvljkd19d"; depends=[]; };
+  BiocParallel = derive2 { name="BiocParallel"; version="1.12.0"; sha256="13ng3n2wsgl3fh0v6jnz3vg51k5c1sh44pqdvblcrcd1qyjmmqhd"; depends=[BH futile_logger snow]; };
+  BiocSklearn = derive2 { name="BiocSklearn"; version="1.0.2"; sha256="1zpfb7g353c01ffldrx7251919r6giy58s19w78jf0bslagblv4y"; depends=[BBmisc knitr reticulate SummarizedExperiment]; };
+  BiocStyle = derive2 { name="BiocStyle"; version="2.6.1"; sha256="03pp04pkcq99kdv2spzr995h2cxsza7l6w3d4gp4112m06prcybm"; depends=[bookdown knitr rmarkdown yaml]; };
+  BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.4.1"; sha256="13xcsd4c2l9jrcbl8axrragk4g2x6sp6xrk5r4gcligdicgxpq9l"; depends=[BiocStyle bookdown git2r httr knitr rmarkdown stringr]; };
+  Biostrings = derive2 { name="Biostrings"; version="2.46.0"; sha256="0vg50qdlxqcm2d6axjnzg8wh8pr4c5gz03l8bdl0llmwzp0zclzk"; depends=[BiocGenerics IRanges S4Vectors XVector]; };
+  BitSeq = derive2 { name="BitSeq"; version="1.22.0"; sha256="1xkmvzv2kdla3mrarlw21w1hz788w71443jbn36a8dc4p6wrnxhy"; depends=[IRanges Rsamtools S4Vectors zlibbioc]; };
+  BrainStars = derive2 { name="BrainStars"; version="1.22.0"; sha256="0fipnpjpsp462dsfsvcrnysca4vsq2k6z15a6mxfxvqs1gybhvvj"; depends=[Biobase RCurl RJSONIO]; };
+  BridgeDbR = derive2 { name="BridgeDbR"; version="1.12.0"; sha256="1yzn8sghqiy64l9q793yp9r3f1g1zy6ixzxbwb7skg1f5n3j7iig"; depends=[RCurl rJava]; };
+  BrowserViz = derive2 { name="BrowserViz"; version="1.10.0"; sha256="1v3d0sfj05f0l4zfw1bd27gjrfkgca0n3mxxc30b42ybdmiif3xc"; depends=[BiocGenerics httpuv jsonlite]; };
+  BrowserVizDemo = derive2 { name="BrowserVizDemo"; version="1.10.0"; sha256="0yps8ll1d14q0b93mpmmp0pgrjaqvxn0d7iqvpy9yg888zk46g8x"; depends=[BiocGenerics BrowserViz httpuv jsonlite Rcpp]; };
+  BubbleTree = derive2 { name="BubbleTree"; version="2.8.0"; sha256="1nhf7sndiakjddvgihicc1vdnzqb8wmmlkng73sim1lb5hrjr391"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr e1071 GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr RColorBrewer WriteXLS]; };
+  BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.42.0"; sha256="1vxr91xnicbmbwz5cssaviq7p0334ikrirm8jmsaxa9sb59cdy07"; depends=[]; };
+  BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.42.0"; sha256="1kay46cmrlilnjmiv2wnl99a4i9nc76f9j1j5rxg8cqxfq2hhmd2"; depends=[BufferedMatrix]; };
+  CAFE = derive2 { name="CAFE"; version="1.14.0"; sha256="0lv0s2d0zqj43dqdkw5m4ac9190l6bfxj73adn5k2fl4wzl3a0rq"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; };
+  CAGEr = derive2 { name="CAGEr"; version="1.20.0"; sha256="0gavrpwibf8gm53f292x1f64vdr2byx97c18cvxg4x3g5m60vx3n"; depends=[beanplot BSgenome data_table GenomicRanges IRanges Rsamtools rtracklayer som VGAM]; };
+  CALIB = derive2 { name="CALIB"; version="1.44.0"; sha256="1n6nlw0da0cyd8ca04gmg3wwpc0sqy0fbxclbxcjhn86rlwyxmg5"; depends=[limma]; };
+  CAMERA = derive2 { name="CAMERA"; version="1.34.0"; sha256="1ibs7s611kdh82hyp5fbkp1mlk0c2nksbkys0h3prsg0lkss2jvi"; depends=[Biobase graph Hmisc igraph RBGL xcms]; };
+  CATALYST = derive2 { name="CATALYST"; version="1.2.0"; sha256="1q31zzi15q2z46wsk3p4fvq8imxjkyywi849h5jyrvnxhca28mbz"; depends=[drc flowCore ggplot2 gridExtra matrixStats plotly RColorBrewer reshape2]; };
+  CAnD = derive2 { name="CAnD"; version="1.10.0"; sha256="17nzlplz9d8dhzm546bznwmz20p7lxnsvq35qd09a3rdcf1abz77"; depends=[ggplot2 reshape]; };
+  CCPROMISE = derive2 { name="CCPROMISE"; version="1.4.0"; sha256="0r0aardhmz76zd5lj1qzwyva8la0jv9wczfmak3r0pp2axaw13yr"; depends=[Biobase CCP GSEABase PROMISE]; };
+  CEMiTool = derive2 { name="CEMiTool"; version="1.0.1"; sha256="1pqdnyxmpcp5gjf2w00cf1msbc96d8q9vdqbafg4x2fv83m9ivbq"; depends=[clusterProfiler data_table DT fgsea ggdendro ggplot2 ggpmisc ggrepel ggthemes gRbase gridExtra gtable htmltools igraph intergraph knitr matrixStats network pracma rmarkdown scales sna stringr WGCNA]; };
+  CFAssay = derive2 { name="CFAssay"; version="1.12.0"; sha256="01yakrkpbs43013936rh8qd4giiz7y7cp9jrdx9i4p6h5h8jzj28"; depends=[]; };
+  CGEN = derive2 { name="CGEN"; version="3.14.0"; sha256="14s1j2h5cb2gfgn73yvb933ng63cr9i8lx8hisd0g8lcfi2b5rxw"; depends=[mvtnorm survival]; };
+  CGHbase = derive2 { name="CGHbase"; version="1.38.0"; sha256="0fynvcsjdbgp69i0nxrc8ni58rhb1kx9k5r3nb91n9i8s43gjqlm"; depends=[Biobase marray]; };
+  CGHcall = derive2 { name="CGHcall"; version="2.40.0"; sha256="11pi6awz3858yb4s0z3qf3kcmsdgp6d4aj41g4lfix1sv5amllch"; depends=[Biobase CGHbase DNAcopy impute snowfall]; };
+  CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.32.0"; sha256="1br3yly4f32yqqnamscnbkz60bpyphj59igw4jnc8zj6ax0rfz4c"; depends=[Biobase CGHbase CGHcall]; };
+  CGHregions = derive2 { name="CGHregions"; version="1.36.0"; sha256="01c4knp9i0k899h34fa7xzd2agil2pis5h2cnnx017zfcfbjf9sq"; depends=[Biobase CGHbase]; };
+  CHRONOS = derive2 { name="CHRONOS"; version="1.6.0"; sha256="0az45ygm4xjkfjz1s4wyq4xqy9ymaf70rhayvavjz4fcnq03z4fz"; depends=[biomaRt circlize doParallel foreach graph openxlsx RBGL RCurl XML]; };
+  CINdex = derive2 { name="CINdex"; version="1.6.0"; sha256="0lr0fqqm6fakavjx0pw3hhyxxdxgc6ncxp9qjw9macinmkgw5r96"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; };
+  CMA = derive2 { name="CMA"; version="1.36.0"; sha256="0l5ikjvfdpy054xsb21z2dz3mjsr3ni639dz2205kpp5l7nwlckd"; depends=[Biobase]; };
+  CNAnorm = derive2 { name="CNAnorm"; version="1.24.0"; sha256="13d34cpg5x9nyl2vb2302p8v0x8mcx81qj4v0az242zchn679rbs"; depends=[DNAcopy]; };
+  CNEr = derive2 { name="CNEr"; version="1.14.0"; sha256="1yf0zpy5qp1vfrjkkld1zp4xiy1jj7rk0b65cbpmhxk6la50wlbc"; depends=[annotate BiocGenerics Biostrings DBI GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 GO_db IRanges KEGGREST poweRlaw R_utils readr reshape2 RSQLite rtracklayer S4Vectors XVector]; };
+  CNORdt = derive2 { name="CNORdt"; version="1.20.0"; sha256="0jrfv8jis5sd4x5zqmk0p5vcb23b42q128b7p35yyb59gjnnm5dz"; depends=[abind CellNOptR]; };
+  CNORfeeder = derive2 { name="CNORfeeder"; version="1.18.0"; sha256="09h2f9asrpw6yrzpa7cq81bl3viz9nl9s0nfdm2af7bvlrwpyf79"; depends=[CellNOptR graph]; };
+  CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.20.0"; sha256="171i49bhfq8vy826m9kpg8pvpgs66al71yd5ydpmv14zkkjz3fnp"; depends=[CellNOptR nloptr]; };
+  CNORode = derive2 { name="CNORode"; version="1.20.0"; sha256="1w6xwggfm0sh90n6qb4gdx4ljpav8ax20r667vk3ysq8vyd7fgqy"; depends=[CellNOptR genalg]; };
+  CNPBayes = derive2 { name="CNPBayes"; version="1.8.0"; sha256="11083vhq1fgqzav5xlcada0ryyqyhgcxxr7c3ijwi6z7xrldx2fm"; depends=[BiocGenerics coda combinat dplyr GenomeInfoDb GenomicRanges ggplot2 gtools IRanges magrittr matrixStats mclust purrr RColorBrewer Rcpp reshape2 S4Vectors SummarizedExperiment tibble tidyr]; };
+  CNTools = derive2 { name="CNTools"; version="1.34.0"; sha256="0nxdx3h5s0fgr4m4i1lizdcgxb7wjddzwxj28m5l67vm919734ka"; depends=[genefilter]; };
+  CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.8.0"; sha256="087m2r7fcw6z7ybbsnzxycsj289c2q6lq1d7zam1ilqhw1bi4rxi"; depends=[exomeCopy foreach GenomicRanges ggplot2 IRanges NOISeq openxlsx plyr Rsamtools S4Vectors]; };
+  CNVrd2 = derive2 { name="CNVrd2"; version="1.16.0"; sha256="1rqjms7k3630kabbc6ish88308lqlrlbzkjflr5apcilc6rfyrx1"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; };
+  CNVtools = derive2 { name="CNVtools"; version="1.72.0"; sha256="0ihmgg5f0p7yhg0273jb785fcrhcw704vz8r6ban8c63wk0qbqb5"; depends=[survival]; };
+  CODEX = derive2 { name="CODEX"; version="1.10.0"; sha256="1knfgii0n8grn4436aksk7f2xkk93ih2snvrp7p8pkr206kqadnq"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; };
+  COHCAP = derive2 { name="COHCAP"; version="1.24.0"; sha256="1ggxn35hif4x4k1rbnxinf0pdqbg1n53wym9rm5zs6cnya4aimgj"; depends=[COHCAPanno gplots RColorBrewer WriteXLS]; };
+  COMPASS = derive2 { name="COMPASS"; version="1.16.0"; sha256="1x1vcn37nr4mcx5q8zahyg654gbx0srxckxvz6shvprpdvgs83sn"; depends=[abind clue data_table dplyr knitr magrittr pdist plyr RColorBrewer Rcpp reshape2 rlang scales tidyr]; };
+  CONFESS = derive2 { name="CONFESS"; version="1.6.0"; sha256="0kmvhwyzxz9ahvvzicigxal3r4ya8y5i090m7pi7d1p5arir7djl"; depends=[changepoint cluster contrast data_table EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; };
+  CORREP = derive2 { name="CORREP"; version="1.44.0"; sha256="10bjv02x2xzanajfbsvbxd7s2s07z0gydx1ypmbfym41jjwac9ra"; depends=[e1071]; };
+  COSNet = derive2 { name="COSNet"; version="1.12.0"; sha256="0x5kg4c5ml7ndqq81k5jy07fyra4q6nhhly6v7qd98gpmvrj6gnk"; depends=[]; };
+  CRISPRseek = derive2 { name="CRISPRseek"; version="1.18.0"; sha256="0qvswjday1mjfa7009kgak09crgi6y7l1irc5hys4b8zmrnxzyc0"; depends=[BiocGenerics BiocParallel Biostrings BSgenome data_table hash IRanges S4Vectors seqinr]; };
+  CRImage = derive2 { name="CRImage"; version="1.26.0"; sha256="1y1xs3agswi4da6mcra3pvssasd4cvhdr2sv664as0dg9m7r43a8"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; };
+  CSAR = derive2 { name="CSAR"; version="1.30.0"; sha256="1915ns969hs46rh85y2krdqgrc81yxhxfv6h8narcni805rgj8n5"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
+  CSSP = derive2 { name="CSSP"; version="1.16.0"; sha256="0xxsck347hvml9ppl9vkvh0f40mkfskwbasz93x5jqvkf046jxda"; depends=[]; };
+  CVE = derive2 { name="CVE"; version="1.4.0"; sha256="0h8xcbnaamz479rax8c8ni7xnqsi43nvkshqhmlynfg60m8yl6cp"; depends=[ape ConsensusClusterPlus ggplot2 gplots jsonlite plyr RColorBrewer shiny WGCNA]; };
+  CancerInSilico = derive2 { name="CancerInSilico"; version="1.4.0"; sha256="19pp282x994ykxczyvls8x71dfwzra21myxky4w2clhgabhqrw9h"; depends=[BH Rcpp testthat]; };
+  CancerMutationAnalysis = derive2 { name="CancerMutationAnalysis"; version="1.20.0"; sha256="16csf668vxrngc5him5hbkj1bbzhi378sxwlfvh2dia2zipazg0w"; depends=[AnnotationDbi limma qvalue]; };
+  CancerSubtypes = derive2 { name="CancerSubtypes"; version="1.4.0"; sha256="0n3la51s0pk3nmbdpv4z0y633qydajby3fy6nxwhpdkkxmlirrgc"; depends=[cluster ConsensusClusterPlus iCluster impute limma NMF sigclust SNFtool survival]; };
+  Cardinal = derive2 { name="Cardinal"; version="1.10.0"; sha256="1yda7zzrmgyz58cg2myp6diwn39w353s4jkmp4d3yhvww2m9kyim"; depends=[Biobase BiocGenerics irlba lattice matter ProtGenerics signal sp]; };
+  Category = derive2 { name="Category"; version="2.44.0"; sha256="0mkav04vbla0xfa0dssxdd0rjs589sxi83xklf5iq5hj3dm8y0i8"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI genefilter graph GSEABase Matrix RBGL]; };
+  CausalR = derive2 { name="CausalR"; version="1.10.0"; sha256="0fj6ndrg78r6ss7ngmpja9dg482namrxxg6vdjdn4agiznk6jn92"; depends=[igraph]; };
+  CellMapper = derive2 { name="CellMapper"; version="1.4.0"; sha256="16pa802b7lg398p8r4ijbiimzhg86fpyq54k13l7pmc4qp26405b"; depends=[S4Vectors]; };
+  CellNOptR = derive2 { name="CellNOptR"; version="1.24.1"; sha256="0p6gksg6h5mbja0mfkh755cvhv7bzkwbg4dy0y34aighz945vy3a"; depends=[ggplot2 graph hash RBGL RCurl Rgraphviz XML]; };
+  CexoR = derive2 { name="CexoR"; version="1.16.0"; sha256="1n3j5l3dlpigd0ihls8s3kwipajj0d9cp0v592f54v75q49fbsz6"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; };
+  ChAMP = derive2 { name="ChAMP"; version="2.9.10"; sha256="1c8sadqkx6cxd1hgms340m2jl3pxmkxk59yfbp69rqbrbjlx2zjy"; depends=[bumphunter ChAMPdata combinat dendextend DMRcate DNAcopy doParallel FEM GenomicRanges goseq Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest illuminaio impute isva limma marray matrixStats minfi missMethyl plotly plyr preprocessCore prettydoc quadprog qvalue RColorBrewer rmarkdown RPMM shiny shinythemes sva wateRmelon]; };
+  ChIPComp = derive2 { name="ChIPComp"; version="1.8.0"; sha256="1nj3903nhii76v6jrm7bfw8kngbq525zikb3nwhvmp4905c77z40"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; };
+  ChIPQC = derive2 { name="ChIPQC"; version="1.14.0"; sha256="1nnmgzad7kzydrmz374f9xvf8s13q6vhanz93v6d9jqh6jnd5di0"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; };
+  ChIPXpress = derive2 { name="ChIPXpress"; version="1.22.0"; sha256="0wcs7gw0kgvbk1f4i8j9cr8kwv1lj45zv9q069cify78rdb106rb"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; };
+  ChIPanalyser = derive2 { name="ChIPanalyser"; version="1.0.0"; sha256="02w4k41wx9cqfk0zjzcv8vdfgwv9rswijmdrsbmcpbrmbwn2jlxi"; depends=[Biostrings BSgenome GenomicRanges IRanges RcppRoll S4Vectors]; };
+  ChIPexoQual = derive2 { name="ChIPexoQual"; version="1.2.0"; sha256="0n0bpwiff3lbirvmzbamjvxa2957wsl0kixfh1hnsr0hqgs3swqf"; depends=[BiocParallel biovizBase broom data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 hexbin IRanges RColorBrewer rmarkdown Rsamtools S4Vectors scales viridis]; };
+  ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.12.7"; sha256="1zab489d7a6bh6ylc68x6yn47gdkmr7p3677grx9l2qafrryjr04"; depends=[AnnotationDbi Biobase BiocGenerics BiocInstaller biomaRt Biostrings BSgenome DBI DelayedArray ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GO_db graph idr IRanges limma matrixStats multtest RBGL regioneR Rsamtools S4Vectors seqinr SummarizedExperiment VennDiagram]; };
+  ChIPseeker = derive2 { name="ChIPseeker"; version="1.14.1"; sha256="1819hny2azpj3wpp09yyqllx668p98ja3ds5a65c0hxy8vbmjxpz"; depends=[AnnotationDbi BiocGenerics boot DOSE dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gridBase gtools IRanges magrittr plotrix RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene UpSetR]; };
+  ChIPseqR = derive2 { name="ChIPseqR"; version="1.32.0"; sha256="0igqlfr5grhkr7dsdyg3c31d3r1wpn413vxmzlckiimfwdi35rqv"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; };
+  ChIPsim = derive2 { name="ChIPsim"; version="1.32.0"; sha256="01kmhzyvnp03v9xydm9xrrkdmlf5dpsnzzcf13i9r03x3m44r4ga"; depends=[Biostrings IRanges ShortRead XVector]; };
+  ChemmineOB = derive2 { name="ChemmineOB"; version="1.16.2"; sha256="0zrg6f5cg54f1bpwjhx2h97w267jr2gyncgfyjs7njkjwwrl9ads"; depends=[BH BiocGenerics Rcpp zlibbioc]; };
+  ChemmineR = derive2 { name="ChemmineR"; version="2.30.2"; sha256="1n83s6bl5lcqgrs30g307vji3ras39pagwgfwcaknhdhwv5wx9d4"; depends=[BH BiocGenerics DBI digest ggplot2 gridExtra Rcpp RCurl rjson]; };
+  Chicago = derive2 { name="Chicago"; version="1.6.0"; sha256="1s2qrz7qbdn3nbkjqyyrmh04kbdrknc7w5cdasg5sch8znnvq6gw"; depends=[data_table Delaporte Hmisc MASS matrixStats]; };
+  ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.32.0"; sha256="0kshy9ri174ksgdnifmf57mjkyjczcx98x98idjmjcxlwrzx4xjr"; depends=[annotate AnnotationDbi Biobase BiocGenerics GenomicRanges IRanges rtracklayer]; };
+  ClassifyR = derive2 { name="ClassifyR"; version="1.12.2"; sha256="1ybcsvh45i4dgx0b7z1wxxh51ydfkx5bh75343f1dpwl1igp8cjw"; depends=[Biobase BiocParallel locfit ROCR]; };
+  Clomial = derive2 { name="Clomial"; version="1.14.0"; sha256="1hd135pcs5sngg1dw93b3f1qnrbl3d1ynyk0wbaal9wzys7fzmcq"; depends=[matrixStats permute]; };
+  Clonality = derive2 { name="Clonality"; version="1.26.0"; sha256="1l19zpnnrx1xz5dc2mvyljlllhlk0gjld8lk675g8iqhm3i8z861"; depends=[DNAcopy]; };
+  ClusterJudge = derive2 { name="ClusterJudge"; version="1.0.0"; sha256="0iff5dsvl92gfidgly0gyv4ivb97j45rmmc5rlllij1z1p0mjrhq"; depends=[httr infotheo jsonlite lattice latticeExtra]; };
+  ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.6.0"; sha256="19wjjzv2f6lkkl0vyyx9jw4y6dqvl5qz7ppk85j3k3r9yhjlpnv1"; depends=[pracma princurve RColorBrewer scatterplot3d]; };
+  CoCiteStats = derive2 { name="CoCiteStats"; version="1.50.0"; sha256="0k8nf7yzbwyyxxgcn4qa7f254vngkabbaxs40ijyyzhwldwdqcjn"; depends=[AnnotationDbi org_Hs_eg_db]; };
+  CoGAPS = derive2 { name="CoGAPS"; version="2.12.0"; sha256="1yhxk94r9l0yz03n3d6gd78daazgbgy84f2840al04b74mr89bx8"; depends=[BH cluster doParallel foreach ggplot2 gplots RColorBrewer Rcpp RcppArmadillo reshape2 shiny]; };
+  CoRegNet = derive2 { name="CoRegNet"; version="1.16.0"; sha256="1d702vgki4wqx355y5v83ajga3j477l2bgvb0lbpkxjaxi57zm80"; depends=[arules igraph shiny]; };
+  CompGO = derive2 { name="CompGO"; version="1.14.0"; sha256="0acjn3w7axq4674p2jsc71hga32svd2fc3xn2mrs85i9bcckwmv5"; depends=[GenomicFeatures ggplot2 pathview pcaMethods RDAVIDWebService reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; };
+  ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="1.17.1"; sha256="1x6kp55iqqsd8bhdl3qch95nfiy2y46ldbbsx1sj1v8f0b0ywwcy"; depends=[circlize colorspace GetoptLong GlobalOptions RColorBrewer]; };
+  ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.42.0"; sha256="1pjw7r4x9867zjvdva58jsgask94ydqzrwzn3z6li47bin5ic0m1"; depends=[ALL Biobase cluster]; };
+  CopywriteR = derive2 { name="CopywriteR"; version="2.10.0"; sha256="17fy2lc5yf3nh6v077kv87h53n263hqz2540lzrl0vjiqrl2plca"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; };
+  CorMut = derive2 { name="CorMut"; version="1.20.0"; sha256="0dy02halbp57vmfbjgjhkgc6icxrvy9nxpb92arrgl6ly8bflcwx"; depends=[igraph seqinr]; };
+  Cormotif = derive2 { name="Cormotif"; version="1.24.0"; sha256="1inxd86lndp2jmdzvjj222697safcppr0gzhcfrcj4bygl36ma6v"; depends=[affy limma]; };
+  CountClust = derive2 { name="CountClust"; version="1.4.1"; sha256="08097iyxx2qm675bnqm8c4hq6rwyqsdfzxkf46mllpyf2mk3wwwf"; depends=[cowplot flexmix ggplot2 gtools limma maptpx picante plyr reshape2 slam SQUAREM]; };
+  CoverageView = derive2 { name="CoverageView"; version="1.16.0"; sha256="1091mxiclb3zhr48bdj7z8gi3v69l4w25cfpfbxhhp70rffn9xfr"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; };
+  CrispRVariants = derive2 { name="CrispRVariants"; version="1.6.0"; sha256="15za6ysnnjfwmiq2dhbpr3kww6c2jvc2y1mf8rfpqx56bd1dh3cb"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; };
+  CytoML = derive2 { name="CytoML"; version="1.4.1"; sha256="1jj79adwrzwx012xvw3czv0m94jc3j2ibpijdfbz8fpjhynrzwqb"; depends=[base64enc Biobase data_table flowCore flowUtils flowWorkspace ggcyto graph jsonlite ncdfFlow openCyto plyr RBGL Rgraphviz XML]; };
+  DAPAR = derive2 { name="DAPAR"; version="1.10.3"; sha256="1xkfw2zjy8wj8x5mddyzw1632zhb2dvdnqp5ikmf1n1bi1mq0ya4"; depends=[AnnotationDbi Cairo clusterProfiler cp4p DAPARdata doParallel dplyr foreach ggplot2 gplots graph highcharter imp4p impute imputeLCMD knitr lattice limma lme4 Matrix MSnbase norm openxlsx pcaMethods png preprocessCore RColorBrewer readxl reshape2 scales siggenes tidyr tmvtnorm vioplot]; };
+  DART = derive2 { name="DART"; version="1.26.0"; sha256="15hqsdi7pa1qn5c5af2izhf609c7lmb0zsv2qwyc9xbf7dn42qmf"; depends=[igraph]; };
+  DASC = derive2 { name="DASC"; version="0.99.11"; sha256="1wm43kgvq3wkwp8hmz70m9c7yxxjsanpqxvcm6x63bna02ysb90y"; depends=[Biobase cvxclustr NMF]; };
+  DBChIP = derive2 { name="DBChIP"; version="1.22.0"; sha256="07psmmvcdl4r5m71kccd9rd3vk521ilhwmcll37pfrmb16s1856x"; depends=[DESeq edgeR]; };
+  DChIPRep = derive2 { name="DChIPRep"; version="1.8.0"; sha256="1ii7mdppqk3gg3ly9x35d0ij2grmi7678dli4xfd2mzkzyc5b6wm"; depends=[assertthat ChIPpeakAnno DESeq2 fdrtool GenomicRanges ggplot2 plyr purrr reshape2 S4Vectors smoothmest soGGi SummarizedExperiment tidyr]; };
+  DECIPHER = derive2 { name="DECIPHER"; version="2.6.0"; sha256="1rc9vipclkiib71684dl0qrd6yll672xxbig22x8v99hscdd3d8y"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; };
+  DEDS = derive2 { name="DEDS"; version="1.52.0"; sha256="18gpj5xk5byiqv548s0vcvp8l5f0k49k8z9iq5qsn53jhh53f26s"; depends=[]; };
+  DEFormats = derive2 { name="DEFormats"; version="1.6.1"; sha256="1wix5n76438896sz62cgsrzjjx4cw7mhxgvsq43w2vpsp3gdrp59"; depends=[checkmate data_table DESeq2 edgeR GenomicRanges SummarizedExperiment]; };
+  DEGraph = derive2 { name="DEGraph"; version="1.30.0"; sha256="083w1vrp0s3xkiz1qm3d03fi1dm69gspq7pqadqwrc3qypjkp3hi"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; };
+  DEGreport = derive2 { name="DEGreport"; version="1.14.1"; sha256="0mbqmkgp9l7ygrh6dsf77mf9fqrql7i4wpw5rg87l6p2misz6662"; depends=[Biobase BiocGenerics cluster ComplexHeatmap ConsensusClusterPlus cowplot DESeq2 dplyr edgeR ggplot2 ggrepel knitr logging magrittr Nozzle_R1 psych quantreg reshape rlang S4Vectors scales SummarizedExperiment tibble tidyr]; };
+  DEGseq = derive2 { name="DEGseq"; version="1.32.0"; sha256="0dh1ig8nj3mf0f8masf48imkkadma0dywbraydcy3cw9vdnc5c7j"; depends=[qvalue samr]; };
+  DEP = derive2 { name="DEP"; version="1.0.1"; sha256="0glkq6xlhcsr364zl4nkc7g3gnscv0yb3kcyvhzgm3bbfvd9q7ac"; depends=[assertthat Biobase broom circlize ComplexHeatmap dplyr DT fdrtool ggplot2 ggrepel gridExtra imputeLCMD limma MSnbase purrr RColorBrewer readr rmarkdown shiny shinydashboard SummarizedExperiment tibble tidyr vsn]; };
+  DESeq = derive2 { name="DESeq"; version="1.30.0"; sha256="0mn5w3cy16iwwk8zxs7za6aa6cnrca75z0g45zd5zh1py5d7nfv9"; depends=[Biobase BiocGenerics genefilter geneplotter lattice locfit MASS RColorBrewer]; };
+  DESeq2 = derive2 { name="DESeq2"; version="1.18.1"; sha256="1iyimg1s0x5pdmvl8x08s8h0v019y0nhjzs50chagbpk2x91fsmv"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 Hmisc IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; };
+  DEXSeq = derive2 { name="DEXSeq"; version="1.24.2"; sha256="18nh8ynxirfwkmc4sawdxgl7w1sl9ny5zpv8zbhv9vi5vgb8pxmj"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; };
+  DEsubs = derive2 { name="DEsubs"; version="1.4.0"; sha256="1i9blymzj18r9646vac9grrjxw6xar8m6chn1dgdila17jag1wlp"; depends=[circlize DESeq DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL samr]; };
+  DFP = derive2 { name="DFP"; version="1.36.0"; sha256="117gmzcgr9wr9wb7g0rm7wlrakd76ys1frhmhx1k6ps97ibxlz1k"; depends=[Biobase]; };
+  DMCHMM = derive2 { name="DMCHMM"; version="1.0.0"; sha256="1y0wmxks51h0d21v8g4mryq7kzq49khhpa88fbhza9xp2bmwk358"; depends=[BiocParallel calibrate fdrtool GenomicRanges IRanges multcomp rtracklayer S4Vectors SummarizedExperiment]; };
+  DMRScan = derive2 { name="DMRScan"; version="1.4.6"; sha256="10b9qlr0la3ilrw44vcq4y8pg7284adrh506wbx7f9ipgka8qx4y"; depends=[GenomicRanges IRanges MASS Matrix mvtnorm RcppRoll]; };
+  DMRcaller = derive2 { name="DMRcaller"; version="1.10.0"; sha256="0z5rzzbnlw3m1yp8d5y2y4rplz73q06kh5gkf57rmpg1pzkfbvca"; depends=[GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; };
+  DMRcate = derive2 { name="DMRcate"; version="1.14.0"; sha256="1kzb6lai3969v8sjwwzrzm9x2adngh5ij2jf0ig073aab3cfibh6"; depends=[DMRcatedata DSS GenomicRanges Gviz IRanges limma minfi missMethyl plyr S4Vectors]; };
+  DMRforPairs = derive2 { name="DMRforPairs"; version="1.14.0"; sha256="1q489w68q4mxg7f8h36f7gmwbldc2fq3a69k6b25d3wg7583v4ax"; depends=[GenomicRanges Gviz R2HTML]; };
+  DNABarcodes = derive2 { name="DNABarcodes"; version="1.8.0"; sha256="0x3pwln8v57w045kxr6hq778hpy5f21gfq5m6wj41rq9awvx5s2p"; depends=[BH Matrix Rcpp]; };
+  DNAcopy = derive2 { name="DNAcopy"; version="1.52.0"; sha256="127il5rlg1hzjlhwhs64x3nm18p00q1pd9ckb2b9ifl0rax95wai"; depends=[]; };
+  DNAshapeR = derive2 { name="DNAshapeR"; version="1.6.0"; sha256="1p44bi5pysrc4pw63zrhxy5q4yqh81kncnp585cjlcbbbyqwz8sv"; depends=[Biostrings fields GenomicRanges Rcpp]; };
+  DOQTL = derive2 { name="DOQTL"; version="1.14.0"; sha256="0hpvh84la7i9m5l9c1hrhmr62f031dyv7nq6aai58bd0lqh9izp5"; depends=[annotate annotationTools Biobase BiocGenerics biomaRt BSgenome_Mmusculus_UCSC_mm10 corpcor doParallel foreach fpc GenomicRanges hwriter IRanges iterators mclust QTLRel regress rhdf5 Rsamtools RUnit VariantAnnotation XML]; };
+  DOSE = derive2 { name="DOSE"; version="3.4.0"; sha256="10dw82car6vi13lic2dghm1gw3a8d2s6nrdhh69fhb7gj6lhr5ds"; depends=[AnnotationDbi BiocParallel DO_db fgsea ggplot2 GOSemSim igraph qvalue reshape2 rvcheck S4Vectors scales]; };
+  DRIMSeq = derive2 { name="DRIMSeq"; version="1.6.0"; sha256="17z8flsb5ngnkcd1g1fj3m0yms71w6q45abc30wwvcnxrg1m9scn"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges limma MASS reshape2 S4Vectors]; };
+  DSS = derive2 { name="DSS"; version="2.26.0"; sha256="0an0nr64f46s9smli0lpj6z62b25dd6xmyk92ndx9kp38vldmv0z"; depends=[Biobase bsseq DelayedArray]; };
+  DTA = derive2 { name="DTA"; version="2.24.0"; sha256="0729w0zkcnwk3rcf4ziz5xw4fsv4dq9p9ri8yizxsxiara4lnhlw"; depends=[LSD scatterplot3d]; };
+  DaMiRseq = derive2 { name="DaMiRseq"; version="1.2.0"; sha256="0m16yh2cfqb5ysdir4b5c3v73204ac5fa0lyvi6x1djkm6nj04hh"; depends=[caret corrplot DESeq2 e1071 EDASeq FactoMineR FSelector ggplot2 Hmisc kknn limma lubridate MASS pheatmap plsVarSel randomForest RColorBrewer reshape2 SummarizedExperiment sva]; };
+  DeMAND = derive2 { name="DeMAND"; version="1.8.0"; sha256="1gf5c3m0jwgipz1wl8viq781kfj0nmpa29cjad9qgrkpihfagh03"; depends=[KernSmooth]; };
+  DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.20.0"; sha256="1877jcl6l2chfa6djv227hf2bqcb4w7frnhmrlh6rzqssq5zrx43"; depends=[ggplot2 limSolve pcaMethods]; };
+  DeepBlueR = derive2 { name="DeepBlueR"; version="1.4.1"; sha256="13qg2nmmhicl1n4ry38syz6ah6mvq2vw6c53id7piyyk0xj3rhrc"; depends=[data_table diffr dplyr filehash foreach GenomeInfoDb GenomicRanges R_utils RCurl rjson rtracklayer settings stringr withr XML]; };
+  DelayedArray = derive2 { name="DelayedArray"; version="0.4.1"; sha256="0s7h2giyvz04cg6248kbbzpwhxdrpnsvl2s8k5c8ricisd9aaz4b"; depends=[BiocGenerics IRanges matrixStats S4Vectors]; };
+  DelayedMatrixStats = derive2 { name="DelayedMatrixStats"; version="1.0.3"; sha256="1cxjbjdq9hg9cm95rci0al7a4pk2h73ym276ahw9q4977zbg6381"; depends=[DelayedArray IRanges Matrix matrixStats S4Vectors]; };
+  DiffBind = derive2 { name="DiffBind"; version="2.6.6"; sha256="1sm5h6nq77hjfis6kr1nqyizcxgfz87dgpqc4fxlfqkmsd9n3vkp"; depends=[amap BiocParallel DESeq2 dplyr edgeR GenomicAlignments GenomicRanges ggplot2 ggrepel gplots IRanges lattice limma locfit RColorBrewer Rcpp Rsamtools S4Vectors SummarizedExperiment systemPipeR zlibbioc]; };
+  DiffLogo = derive2 { name="DiffLogo"; version="2.2.0"; sha256="0nc07vn9ldhnv9wm5i9b7axkvsi7v5gcf8saa6zlkr7mf5lsinhg"; depends=[cba]; };
+  Director = derive2 { name="Director"; version="1.4.0"; sha256="1yq4amwflg168fgdr91lh4c8y3azw2fdsbp2b0j6mnhcjqgmaxk8"; depends=[htmltools]; };
+  DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.20.0"; sha256="1c4s6x0qm20556grcd1xys9kkpnlzpasaai474malwcg6qvgi4x1"; depends=[BiocGenerics IRanges S4Vectors]; };
+  Doscheda = derive2 { name="Doscheda"; version="1.0.0"; sha256="04dzr26lvhcd9h6b5s61csygrc1357b8d6zxbn955s6crbr5p2ns"; depends=[affy calibrate corrgram d3heatmap drc DT ggplot2 gridExtra httr jsonlite limma matrixStats prodlim readxl reshape2 shiny shinydashboard stringr vsn]; };
+  DriverNet = derive2 { name="DriverNet"; version="1.18.0"; sha256="068ps1ril55fhfbxlzchrjyx75xvqqh8ny7gp99k6hcmksjnbbsb"; depends=[]; };
+  DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.20.1"; sha256="0bw9bwwacp9mznldl61r5znsy34yb1zkil6fd9ilxp8wmxicphjk"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; };
+  DupChecker = derive2 { name="DupChecker"; version="1.16.0"; sha256="1fxcs2vljp2rh9qp2xmqp8ri6v41gzdy51jhhv33rxfgh9jz70g5"; depends=[R_utils RCurl]; };
+  DynDoc = derive2 { name="DynDoc"; version="1.56.0"; sha256="1zc43f2v7qh44slc0za71jb0a5fsqp55y5fbnb9fnd6139im5vxc"; depends=[]; };
+  EBImage = derive2 { name="EBImage"; version="4.20.1"; sha256="0xwq9jd9sn5h3al7k03byr4diyrmk4jx344spdcaw58a830w9q7j"; depends=[abind BiocGenerics fftwtools htmltools htmlwidgets jpeg locfit png RCurl tiff]; };
+  EBSEA = derive2 { name="EBSEA"; version="1.6.0"; sha256="13qgmcwv4b06zgaalqf9sq0wkkhnf38h98fw2dqql8z9w3n5sbnz"; depends=[edgeR gtools limma]; };
+  EBSeq = derive2 { name="EBSeq"; version="1.18.0"; sha256="0pr7xaf64wn3ry358raqd7vpp7p3zq88qp9jkx6xf9f83bmyx7mw"; depends=[blockmodeling gplots testthat]; };
+  EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.12.0"; sha256="1bg4y0jqf034p400j30yskb0fhxk9mlnbrmdcr29r2212xra4g7b"; depends=[EBSeq]; };
+  EBarrays = derive2 { name="EBarrays"; version="2.42.0"; sha256="0hd297adyp3fkppmzncdcn0y7kvgixkp460816vsrzphs4v2fi1m"; depends=[Biobase cluster lattice]; };
+  EBcoexpress = derive2 { name="EBcoexpress"; version="1.22.0"; sha256="1k9n95hqhd5rb811vc1idjslv6m5x3s30zv9h545h26cklqqmd76"; depends=[EBarrays mclust minqa]; };
+  EDASeq = derive2 { name="EDASeq"; version="2.12.0"; sha256="07zm89zcivyn2261aq9grqmly8ji482kr9h9dyfknfdfrpv7jpwv"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics biomaRt Biostrings DESeq GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; };
+  EDDA = derive2 { name="EDDA"; version="1.16.0"; sha256="000kp07khndncb9d4gql8gkjwrv3r08qf118g51zcmfrpzn26a30"; depends=[baySeq DESeq edgeR Rcpp ROCR snow]; };
+  EGAD = derive2 { name="EGAD"; version="1.6.0"; sha256="0dxbw39dymwxd6hvnx9c1y97z6d2br55c0md1l72wajf5qa8nvfc"; depends=[affy arrayQualityMetrics Biobase GEOquery gplots igraph impute limma MASS Matrix plyr RColorBrewer RCurl zoo]; };
+  EGSEA = derive2 { name="EGSEA"; version="1.6.1"; sha256="1srjms8xa9qnnm6mzlgmdqk0zd4485k6d20ygzqqi0jj86xa6ava"; depends=[AnnotationDbi Biobase DT edgeR EGSEAdata gage ggplot2 Glimma globaltest gplots GSVA HTMLUtils htmlwidgets hwriter limma metap org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview plotly RColorBrewer safe stringi topGO]; };
+  ELBOW = derive2 { name="ELBOW"; version="1.14.0"; sha256="0hw7sb20id7zxdashrsxxhcw96z0m3yp12gizq4x5gw53iipw73w"; depends=[]; };
+  ELMER = derive2 { name="ELMER"; version="2.2.7"; sha256="0qdl79x7g1pd8z16s3zja2hvmf9bmr6520gh7ghavdh6qaxqji0h"; depends=[biomaRt circlize ComplexHeatmap doParallel downloader dplyr ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel gridExtra Gviz IRanges lattice magrittr Matrix MultiAssayExperiment plotly plyr readr reshape rvest S4Vectors SummarizedExperiment TCGAbiolinks xml2]; };
+  EMDomics = derive2 { name="EMDomics"; version="2.8.0"; sha256="09lkg7c1sl5jmg8z1yfaqw5hy3jcpb0wyh0l9sc14hbsncvq1nmh"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; };
+  ENCODExplorer = derive2 { name="ENCODExplorer"; version="2.4.0"; sha256="0mw3pgbpk1q0jgzcb3pk2kgdw9igh1zm4bywzfzg7k1k1xjzk3yy"; depends=[data_table dplyr DT jsonlite RCurl shiny shinythemes stringi stringr tidyr]; };
+  ENVISIONQuery = derive2 { name="ENVISIONQuery"; version="1.26.0"; sha256="0vc9d17m5bdjj4wqcl5lr99bv89yzs75m94rfckjjzvx7j6cmqcx"; depends=[rJava XML]; };
+  ENmix = derive2 { name="ENmix"; version="1.14.0"; sha256="117jp47hpm276x4q25jwqfagymvay0qk3ji5l9xvrj74piwqpgwh"; depends=[doParallel foreach geneplotter impute MASS minfi preprocessCore SummarizedExperiment sva wateRmelon]; };
+  EasyqpcR = derive2 { name="EasyqpcR"; version="1.20.0"; sha256="06lmq3pp0j86rv9bgs809r30qscgpxv5vjbkccf32q9wv82vd7hw"; depends=[gWidgetsRGtk2 matrixStats plotrix plyr]; };
+  EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.6.0"; sha256="1wv1anm4bwm2kqi9lqn06bl1w17q6wvc1v2amrifbqjbmi5k7g8y"; depends=[]; };
+  EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.9.2"; sha256="0ffyb40qcvpjqval78146w8wvk3ng7v1ipdwnqkzj705gqkwbw9y"; depends=[ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats Rcpp]; };
+  EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.8.6"; sha256="1vxnl0n34ygl4fx28s8zmp71b8hidlp4sn34k1cfkw7hiaf2gg9n"; depends=[AnnotationDbi BiocFileCache biocGraph ComplexHeatmap DESeq2 EDASeq edgeR geneplotter GO_db graph GSEABase hwriter KEGGgraph KEGGREST limma MASS pathview rappdirs ReportingTools Rgraphviz S4Vectors safe SPIA SummarizedExperiment topGO]; };
+  EpiDISH = derive2 { name="EpiDISH"; version="1.0.0"; sha256="065bvrfsssf5y4j9axqdcybqb5i8y2hnl09f9jr44bpbay34ay5f"; depends=[e1071 MASS quadprog]; };
+  EventPointer = derive2 { name="EventPointer"; version="1.2.0"; sha256="1yh6yhaf8c2rp8f4ipsk014552pplb28cl5z7wjwvarjb21waj05"; depends=[affxparser doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges graph igraph limma MASS Matrix matrixStats nnls prodlim RBGL S4Vectors SGSeq stringr SummarizedExperiment]; };
+  ExiMiR = derive2 { name="ExiMiR"; version="2.20.0"; sha256="0saxway680972dmn6q1gbbmkxcwv08hl2bq973qbyrv5drg6g4vv"; depends=[affy affyio Biobase limma preprocessCore]; };
+  ExperimentHub = derive2 { name="ExperimentHub"; version="1.4.0"; sha256="1hgg3x6r4ldlqjv8by6vv5n5f8h647y3lvxwrmi79c6dvrghp0j3"; depends=[AnnotationHub BiocGenerics BiocInstaller curl S4Vectors]; };
+  ExperimentHubData = derive2 { name="ExperimentHubData"; version="1.4.0"; sha256="07nd9n09naq8p276fbnad3wp95y11n5ws65xncf66i7356a3rkw4"; depends=[AnnotationHubData BiocCheck BiocGenerics BiocInstaller curl DBI ExperimentHub httr S4Vectors]; };
+  ExpressionAtlas = derive2 { name="ExpressionAtlas"; version="1.6.0"; sha256="099xkp39mbdg1xm6mydnpwrkbyn3y719xf1s4xyva0nkwx1g14b8"; depends=[Biobase httr limma S4Vectors SummarizedExperiment XML xml2]; };
+  ExpressionView = derive2 { name="ExpressionView"; version="1.30.0"; sha256="1kjp8ndbx5bhk941ba6nza42h8zi97xwam2q0pf8pk168sch41kr"; depends=[AnnotationDbi bitops caTools eisa GO_db isa2 KEGG_db]; };
+  FEM = derive2 { name="FEM"; version="3.6.0"; sha256="0bs7p9lqp6bi7c9j8vi4gbj8md14cqc9vxxkfb0bc35mr5641q4d"; depends=[AnnotationDbi BiocGenerics corrplot graph igraph impute limma marray Matrix org_Hs_eg_db]; };
+  FGNet = derive2 { name="FGNet"; version="3.12.0"; sha256="1f33k7dx7f97kzjpq1jvs614vjsyg3yd03s2y7xxwhydmx02n7vs"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; };
+  FISHalyseR = derive2 { name="FISHalyseR"; version="1.12.0"; sha256="07q5paypybw8qq17wyl7qqlrdy5kfg2k24rj2ic4gjgb6qiic38b"; depends=[abind EBImage]; };
+  FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.14.0"; sha256="1nyw8h4kjddn75878adhlilwjnm4wlyhksyp2ygx6cm35fbqa2v3"; depends=[fda MASS]; };
+  FamAgg = derive2 { name="FamAgg"; version="1.6.0"; sha256="0p87aidqbzdwhihsnaammv1i5yb0rvhs0xrjlmq64z6q9ffj7k32"; depends=[BiocGenerics gap igraph kinship2 Matrix survey]; };
+  FindMyFriends = derive2 { name="FindMyFriends"; version="1.8.0"; sha256="13f6hdjn4l5xfrdskq2abpzczxcm8sy71fqpfj6hsxzj06fz9a36"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; };
+  FitHiC = derive2 { name="FitHiC"; version="1.4.0"; sha256="12ylhrppi051m7nqsgq95kzd9g9wmp34i0zzfi55cjqawlpx7c6n"; depends=[data_table fdrtool Rcpp]; };
+  FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.10.0"; sha256="0mgqnmznqpy8ikzg1829bjgxnznm43wkgirhpgfskdxfzr4zqs3a"; depends=[jsonlite RCurl XML]; };
+  FlowSOM = derive2 { name="FlowSOM"; version="1.10.0"; sha256="0kgzyngm36wzwgsrf40p00543w4spisph78yp5hl5i4hghh4zkij"; depends=[BiocGenerics ConsensusClusterPlus flowCore flowUtils igraph tsne XML]; };
+  FourCSeq = derive2 { name="FourCSeq"; version="1.12.0"; sha256="08fq289m8g7fgmsrph1gq45q6zpfnrzpm0n4qyf2vc5hsdgnm4qh"; depends=[Biobase Biostrings DESeq2 fda GenomicAlignments GenomicRanges ggbio ggplot2 gtools LSD Matrix reshape2 Rsamtools rtracklayer SummarizedExperiment]; };
+  FunChIP = derive2 { name="FunChIP"; version="1.4.0"; sha256="0gx2yjid47p9q7f89823avqj4r367s1ifvh4p2g351gzij63p9ab"; depends=[doParallel fda foreach GenomeInfoDb GenomicAlignments GenomicRanges RColorBrewer Rcpp Rsamtools shiny]; };
+  FunciSNP = derive2 { name="FunciSNP"; version="1.22.0"; sha256="1lgvca8npk1092dyl5jhx46ir46b3ab5jgshj5b19dg0bdzi0fj1"; depends=[Biobase BiocGenerics ChIPpeakAnno FunciSNP_data GenomicRanges ggplot2 IRanges plyr reshape Rsamtools rtracklayer S4Vectors scales snpStats TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; };
+  GA4GHclient = derive2 { name="GA4GHclient"; version="1.2.0"; sha256="1k9rd1q47ac75h3vw54kxi89g8w11bis6cz26xkvhdcim97bxs10"; depends=[BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges httr IRanges jsonlite S4Vectors VariantAnnotation]; };
+  GA4GHshiny = derive2 { name="GA4GHshiny"; version="1.0.0"; sha256="1q461l1dy7fsl1y081iyijwizk342q7v5l0irpmx1gnp2kpmvpr2"; depends=[AnnotationDbi BiocGenerics dplyr DT GA4GHclient GenomeInfoDb GenomicFeatures openxlsx purrr S4Vectors shiny shinyjs shinythemes tidyr]; };
+  GAprediction = derive2 { name="GAprediction"; version="1.4.0"; sha256="10hknskkfvpzjzcih1h6pl68p9ix9zh98ym1gzw68qjx0mhlm591"; depends=[glmnet Matrix]; };
+  GEM = derive2 { name="GEM"; version="1.4.0"; sha256="0r6zgsyfwra3qx1vis7a7mr5aiqyj7rpgs3cqdir2yjlg3y01r1w"; depends=[ggplot2]; };
+  GENESIS = derive2 { name="GENESIS"; version="2.8.1"; sha256="0w3xrw6a1fkcp49nyarkp4yykjk79gqq7rzwixdk4363d5pnm7gp"; depends=[Biobase BiocGenerics gdsfmt GenomicRanges graph GWASTools IRanges S4Vectors SeqArray SeqVarTools]; };
+  GENIE3 = derive2 { name="GENIE3"; version="1.0.0"; sha256="1lxbkhlvb082nrmlq2b57chi0vpyaqwj56ngbzli8qdmp1gz4qd3"; depends=[reshape2]; };
+  GEOmetadb = derive2 { name="GEOmetadb"; version="1.40.0"; sha256="003inwm8qkjdaihlx4009nwj3rgjn3xdk0m8k696qhniq99gcd0a"; depends=[GEOquery RSQLite]; };
+  GEOquery = derive2 { name="GEOquery"; version="2.46.14"; sha256="12m6l95qjip33rw97qymc2i0wpmdmsvswlcp93b3gssxslpzkqzi"; depends=[Biobase dplyr httr limma magrittr readr tidyr xml2]; };
+  GEOsearch = derive2 { name="GEOsearch"; version="1.1.4"; sha256="0k0vn99rz2821gswb834nn9ib099a152y2828ka7qvhag4shzdy9"; depends=[org_Hs_eg_db org_Mm_eg_db RCurl]; };
+  GEOsubmission = derive2 { name="GEOsubmission"; version="1.30.0"; sha256="0sl9m7lk7jczpcfhn50yn322v1s65d9swjidcnzk3ydv47z419p8"; depends=[affy Biobase]; };
+  GEWIST = derive2 { name="GEWIST"; version="1.22.0"; sha256="0lfm19s4z5j7zhpzhfa7rqdz09ip05cf2zbnsqv9widdmkcw2wnk"; depends=[car]; };
+  GGBase = derive2 { name="GGBase"; version="3.40.0"; sha256="0iavmbfvx5in8pq4c7bx63anlj4l1ra5qmr3pgx7x3cp43d6qsza"; depends=[AnnotationDbi Biobase BiocGenerics digest genefilter GenomicRanges IRanges limma Matrix S4Vectors snpStats SummarizedExperiment]; };
+  GGtools = derive2 { name="GGtools"; version="5.14.0"; sha256="0h1lcz363z7gcy3i3ap0vrdrq71wlzr3y0f9866zmn67hlrfbp7i"; depends=[AnnotationDbi biglm Biobase BiocGenerics Biostrings bit data_table ff GenomeInfoDb GenomicRanges GGBase ggplot2 Gviz hexbin Homo_sapiens IRanges iterators reshape2 ROCR Rsamtools rtracklayer S4Vectors snpStats VariantAnnotation]; };
+  GISPA = derive2 { name="GISPA"; version="1.2.0"; sha256="1kyghhfv0jabc823kxcab267snjnxba7d3swnfssshrxirwbgy3b"; depends=[Biobase changepoint data_table genefilter GSEABase HH lattice latticeExtra plyr scatterplot3d]; };
+  GLAD = derive2 { name="GLAD"; version="2.42.0"; sha256="1ay8wrhgwv6jyc54pv8xywdhm3v48qavdm6rq7l0n7fy4kydxz75"; depends=[]; };
+  GMRP = derive2 { name="GMRP"; version="1.5.0"; sha256="124jzpd0y8c1fdp6ndh75q0nqbcwjkmmm3w6ih2qinanbc2b5bmp"; depends=[diagram GenomicRanges plotrix]; };
+  GOFunction = derive2 { name="GOFunction"; version="1.26.0"; sha256="0ykagd4klrsjbf5iqn87anlplvnvvd3fhklpn1fm4fkx1lvg6jvx"; depends=[AnnotationDbi Biobase DBI GO_db graph Rgraphviz SparseM]; };
+  GOSemSim = derive2 { name="GOSemSim"; version="2.4.1"; sha256="0if17mizlf1v85nzbzkc3nl8052cmf7a3a04zrphc0rv8ndyl1s7"; depends=[AnnotationDbi GO_db Rcpp]; };
+  GOSim = derive2 { name="GOSim"; version="1.16.0"; sha256="1gy95bywv33if5fkhaihx8h64mcvzn7hrid91zib9asfpllbq3j7"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; };
+  GOTHiC = derive2 { name="GOTHiC"; version="1.14.0"; sha256="0qn9nlr1yfd91p5wriwnvqmwndfzpy0c18zbnqkv7i2s66mcwkja"; depends=[BiocGenerics Biostrings BSgenome data_table GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; };
+  GOexpress = derive2 { name="GOexpress"; version="1.12.0"; sha256="0yfqw3v1ywwpkvnsjz20mkg9ay35hfs4ldab6gza197jbg61qq88"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer RCurl stringr]; };
+  GOpro = derive2 { name="GOpro"; version="1.4.2"; sha256="1djrws9n6znzhzs8lbpclcx227d5fv23mmw181pcnmp9kgf0f4w4"; depends=[AnnotationDbi BH dendextend doParallel foreach GO_db IRanges MultiAssayExperiment org_Hs_eg_db Rcpp S4Vectors]; };
+  GOstats = derive2 { name="GOstats"; version="2.44.0"; sha256="04gqfdlx9fxf97qf0l28x4aaqvl10n6v58qiz5fiaw05sbj1pf1i"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL Rgraphviz]; };
+  GOsummaries = derive2 { name="GOsummaries"; version="2.12.0"; sha256="1aqzr7llwcq2w5vn7q3yny7x6kllr62cm43qs3d2qm4iyvfb2a4s"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; };
+  GRENITS = derive2 { name="GRENITS"; version="1.30.0"; sha256="0bi7vxq3wh9vy4hibpbpk5vzf0skqxs1jg3macscbvwm7ggqs801"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; };
+  GRmetrics = derive2 { name="GRmetrics"; version="1.4.1"; sha256="11ifwb1avizipg2v5safs0i7yr1rrydyg41y76ccc45ygjdy303g"; depends=[drc ggplot2 plotly S4Vectors SummarizedExperiment]; };
+  GRridge = derive2 { name="GRridge"; version="1.2.0"; sha256="1s29c9jsh34qswib39v0xp9ir005d9pa5lv92ka3s8a4y5hxfi7a"; depends=[annotate Biobase BiocGenerics graph GSEABase Iso penalized survival]; };
+  GSALightning = derive2 { name="GSALightning"; version="1.6.0"; sha256="1n9dc5ahfslh9yvz81ppgjlnpmcm1c84rsmpgzy2hrzkrrnqxlsx"; depends=[data_table Matrix]; };
+  GSAR = derive2 { name="GSAR"; version="1.12.0"; sha256="0v6sy4mi3zvgnk0f9diy4zz8vl5n5pdm3yyb6hm6bqy56wx0bl7r"; depends=[igraph]; };
+  GSCA = derive2 { name="GSCA"; version="2.8.0"; sha256="1r9kdvrj1f91cdl8zwkhpskdg7m10qpz1xy0a3r67xfs2ciyagyi"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; };
+  GSEABase = derive2 { name="GSEABase"; version="1.40.1"; sha256="10cmjxahg2plwacfan6g0k8cwyzya96ypc7m1r79gwqkyykxw5fz"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; };
+  GSEAlm = derive2 { name="GSEAlm"; version="1.38.0"; sha256="1kz27bbccgi34z1i1wlsk8ikqbv2mi8f8i9is0irhl9zgvbrczxz"; depends=[Biobase]; };
+  GSRI = derive2 { name="GSRI"; version="2.26.0"; sha256="12silcf67r3ni40g7vsc7iv15arzy7w12abpj2xcjfd9nr4d84js"; depends=[Biobase fdrtool genefilter GSEABase les]; };
+  GSReg = derive2 { name="GSReg"; version="1.12.0"; sha256="1rdzkv6kf14shfddvrz3pssjgr6pvg6is4lzcvjzrxai4y34n0y6"; depends=[AnnotationDbi GenomicFeatures Homo_sapiens org_Hs_eg_db]; };
+  GSVA = derive2 { name="GSVA"; version="1.26.0"; sha256="1zvi0w7clm5qg6fv6akqw4cx84kswcgzfzjdkhxsrid0l4hwmw09"; depends=[Biobase BiocGenerics geneplotter GSEABase shiny shinythemes]; };
+  GUIDEseq = derive2 { name="GUIDEseq"; version="1.8.0"; sha256="1xsjz3mq6iawspdz1rif3fb8j2h92ykfrjj3lzlcsnvg92bnlczq"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table GenomeInfoDb GenomicAlignments GenomicRanges hash IRanges limma matrixStats Rsamtools S4Vectors]; };
+  GWASTools = derive2 { name="GWASTools"; version="1.24.1"; sha256="1x8p32f47fki2kl0pkjv4v7az8s1b6zwqjnxywfxy0drs9g6lky4"; depends=[Biobase DBI DNAcopy gdsfmt GWASExactHW lmtest logistf quantsmooth RSQLite sandwich survival]; };
+  GenRank = derive2 { name="GenRank"; version="1.6.0"; sha256="071k23qknpd46x22bj2cmp07mmxj22higw8ma4b0a8w0wmd05bwz"; depends=[matrixStats reshape2 survcomp]; };
+  GenVisR = derive2 { name="GenVisR"; version="1.8.0"; sha256="03jc5qz1xfqpbll8qbs5ib7g70s21crmggc9a6xi9nvjq8ky05r6"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings DBI FField GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales viridis]; };
+  GeneAnswers = derive2 { name="GeneAnswers"; version="2.20.0"; sha256="11bdc59ybi1kck3jkzilf0vmql6a3k97b1f9h940h28mhgn5x9w6"; depends=[annotate Biobase downloader Heatplus igraph MASS RBGL RColorBrewer RCurl RSQLite XML]; };
+  GeneBreak = derive2 { name="GeneBreak"; version="1.8.0"; sha256="1157crj12c3girr6973a24ph15rfjw0vcakr42fpx7yhhirs89lb"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; };
+  GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.24.0"; sha256="1l8829axy6fp29bkqlwbjcsajq99yb86yp5cc8211zprlhlxb30i"; depends=[Biobase PGSEA]; };
+  GeneGA = derive2 { name="GeneGA"; version="1.28.0"; sha256="172hwxp91zj4pvamarnkx9cf1jm3zplws7scb4q00n1nxirhfzfd"; depends=[hash seqinr]; };
+  GeneGeneInteR = derive2 { name="GeneGeneInteR"; version="1.4.0"; sha256="14jnlc1icg7ws6gvffx3jpmhzcfaznzw6p8i0l1wpx22jyy3qam5"; depends=[data_table FactoMineR GenomicRanges GGtools igraph IRanges kernlab mvtnorm plspm rioja Rsamtools snpStats]; };
+  GeneMeta = derive2 { name="GeneMeta"; version="1.50.0"; sha256="1cf8z6wy9yhs1y7f8fimjkx52brgr9fkhjaa9a62d2rvan65g9s2"; depends=[Biobase genefilter]; };
+  GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.20.0"; sha256="17r2106r9fkpsj592dq6k70n8jj6gv65hrmblnsssck6h0n6n3ix"; depends=[graph htmlwidgets plyr Rcpp Rgraphviz rjson XML]; };
+  GeneOverlap = derive2 { name="GeneOverlap"; version="1.14.0"; sha256="02svcyk1pa470033q2iv8148ypf6gbisxl8f09ksblvrrd0flh38"; depends=[gplots RColorBrewer]; };
+  GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.34.0"; sha256="0ycxk1njlrshk6wr466r8jdj3pfl125ilifgrvcbgr526ndalmpp"; depends=[affxparser Biobase Biostrings RColorBrewer S4Vectors]; };
+  GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.22.0"; sha256="1v2ry9k8kqr95nx1z347f8hqdbawqb8f5p7iq7jb2w1smvhb26fr"; depends=[Biobase limma MASS survival]; };
+  GeneSelector = derive2 { name="GeneSelector"; version="2.28.0"; sha256="0fc12sngwsw3sggmi08lb8r8lvb3hp77jqv3k1501nba4gq2wa9s"; depends=[Biobase limma multtest samr siggenes]; };
+  GeneticsDesign = derive2 { name="GeneticsDesign"; version="1.46.0"; sha256="174swyvx1j9px2shn1188zgilyiclxclr317gsv5ab7f671lzl8n"; depends=[gmodels gtools mvtnorm]; };
+  GeneticsPed = derive2 { name="GeneticsPed"; version="1.40.0"; sha256="0q2jrpi6ha4hsxsmprwsrls2ybs0clms6vh7smwa9j9g5lz7i93y"; depends=[gdata genetics MASS]; };
+  GenoGAM = derive2 { name="GenoGAM"; version="1.6.0"; sha256="1dvaapinarpgn3i63iqhdbjh9mc5h7sgdxwlv9d55l42d1jyj6h3"; depends=[BiocParallel Biostrings data_table DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges IRanges mgcv reshape2 Rsamtools S4Vectors SummarizedExperiment]; };
+  GenomeGraphs = derive2 { name="GenomeGraphs"; version="1.38.0"; sha256="15p75cbbgwgcc3awyvawkah491yim0rp73af815pfiai11a51i4m"; depends=[biomaRt]; };
+  GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.14.0"; sha256="1jhm0imkac4gvchbjxj408aakk39xdv2fyh818d3lk295bz6bnyp"; depends=[BiocGenerics GenomeInfoDbData IRanges RCurl S4Vectors]; };
+  GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.14.1"; sha256="033p6fw46sn7w2yyn14nb9qcnkf30cl0nv6zh014ixflm3iifz39"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; };
+  GenomicDataCommons = derive2 { name="GenomicDataCommons"; version="1.2.0"; sha256="0ndzpzripibx38nk40xpz4xkghhr4an3skqdhfh8479jk2fnfwjd"; depends=[data_table GenomicRanges httr IRanges jsonlite lazyeval magrittr readr xml2]; };
+  GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.30.3"; sha256="010vn8hlwbnw12pd1d8pv6m12yp3xwx557gba5rbjq9p4qypnn3z"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RMySQL RSQLite rtracklayer S4Vectors XVector]; };
+  GenomicFiles = derive2 { name="GenomicFiles"; version="1.14.0"; sha256="0r0wmrs5jycf1kckhnc2sgjmp336srlcjdkpbb1ymm7kazdd0s9n"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; };
+  GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.12.0"; sha256="0f0ki2zsaxg6f4qr47xgyhxm6jvms0s1zab7f0vcnw8jd7vhmnzn"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; };
+  GenomicRanges = derive2 { name="GenomicRanges"; version="1.30.2"; sha256="0c3r155603vb4zjs3adqa72770bh8karc11y8gl62l1m24jrkbnj"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; };
+  GenomicScores = derive2 { name="GenomicScores"; version="1.2.2"; sha256="0g6i90vn29pasiqbq0088bgdisr356539z94scv7cila968inh7n"; depends=[AnnotationHub Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors XML]; };
+  GenomicTuples = derive2 { name="GenomicTuples"; version="1.12.0"; sha256="0962l9204vm5x7vcqzlvlgblhdczwp4zbq4i262gqh79lnx4yq1y"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; };
+  Genominator = derive2 { name="Genominator"; version="1.32.0"; sha256="1gh56xyfgx5f8rb0wbpvkg8h2q1ci2qf3ngkg3sficn65pbj9iha"; depends=[BiocGenerics DBI GenomeGraphs IRanges RSQLite]; };
+  Glimma = derive2 { name="Glimma"; version="1.6.0"; sha256="19640crf4pivalivakk22llr9z505d5iq09fnlj4cj6fnga7abzq"; depends=[Biobase edgeR jsonlite S4Vectors]; };
+  GlobalAncova = derive2 { name="GlobalAncova"; version="3.46.0"; sha256="16bhrkrz24hwxv0py4xiv043z1gxlak3qvdrdmc8pw7swv52hv9w"; depends=[annotate AnnotationDbi corpcor globaltest]; };
+  GoogleGenomics = derive2 { name="GoogleGenomics"; version="2.0.0"; sha256="1z3p1xyj45hapvy765akxf88ll9fzsjnprc1g8cv9a9fdjg7vw36"; depends=[Biobase Biostrings GenomeInfoDb GenomicAlignments GenomicRanges httr IRanges rjson Rsamtools S4Vectors VariantAnnotation]; };
+  GraphAT = derive2 { name="GraphAT"; version="1.50.0"; sha256="0hrcz1d4k0g1k8izzk9znwxgr3f6ilv93vswqv3z3sfk5ib3aznr"; depends=[graph MCMCpack]; };
+  GraphAlignment = derive2 { name="GraphAlignment"; version="1.42.0"; sha256="1vq6g4w75wlnq201mc93xmbp80dj9rc3ay7zqcpwr4bjnpmgh53v"; depends=[]; };
+  GraphPAC = derive2 { name="GraphPAC"; version="1.20.0"; sha256="0g0r6714d0bamq5gwggqkbh9ac23wqjdlp358br7z4gkgixxz8zd"; depends=[igraph iPAC RMallow TSP]; };
+  GreyListChIP = derive2 { name="GreyListChIP"; version="1.10.0"; sha256="17bn80x35nw0ys4n67m8sq3zij5ikasi4fqchx98pn72czl932r4"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer SummarizedExperiment]; };
+  Guitar = derive2 { name="Guitar"; version="1.16.0"; sha256="03pivwaw41ycpg4iwppg9dn7ina8g98kixwpxhv9nnvkzf3124xp"; depends=[GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer]; };
+  Gviz = derive2 { name="Gviz"; version="1.22.3"; sha256="1grjzrjpzkw572pbvpsvdnfkfgwybl0cnjd7nnk2xdr26wnbsi9a"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; };
+  HCsnip = derive2 { name="HCsnip"; version="1.17.0"; sha256="109svm1nzvf0a6hi9fvg7pzfpdbh44dlp6v0dphqm246gqh2cq22"; depends=[Biobase clusterRepro coin fpc impute randomForestSRC sigaR sm survival]; };
+  HDF5Array = derive2 { name="HDF5Array"; version="1.6.0"; sha256="0kcdza41saqv6vlpvqd841awbiwkg84lh0plx6c7fmfgbqv7a0jh"; depends=[BiocGenerics DelayedArray IRanges rhdf5 S4Vectors]; };
+  HDTD = derive2 { name="HDTD"; version="1.12.0"; sha256="0dd1z93pv141q51nvjh6dfgvxw6h9wwdllbvy7s4z5vd43w576s8"; depends=[]; };
+  HELP = derive2 { name="HELP"; version="1.36.0"; sha256="0216pwpfi626g49hgz8g2gniixakcdx5yhrw03dy0pn0xp26wnhc"; depends=[Biobase]; };
+  HEM = derive2 { name="HEM"; version="1.50.0"; sha256="10p66m46zqm7dj6ldx8dqrwymaplzrpvbg6yqzyx7llvzar7dil7"; depends=[Biobase]; };
+  HIBAG = derive2 { name="HIBAG"; version="1.14.0"; sha256="0kk4bf6q6kk8vm18vy56p075538awfbv310c4241m5j3i7g4pxxl"; depends=[]; };
+  HMMcopy = derive2 { name="HMMcopy"; version="1.20.0"; sha256="0jhfgshaj5917b24siiik72qaa19w05v5jqa6zj5vi8j02lv7i9g"; depends=[geneplotter IRanges]; };
+  HTSFilter = derive2 { name="HTSFilter"; version="1.18.0"; sha256="1q1782cky7kh042wfr5h588019jwzm9sw4c9f503hq2gfgb6n3xi"; depends=[Biobase BiocParallel DESeq DESeq2 edgeR]; };
+  HTSanalyzeR = derive2 { name="HTSanalyzeR"; version="2.30.0"; sha256="1h75igpbws4hdd2nrnbf8w0rpyfjmbb57m3ja5fir0l4x7lwn1rw"; depends=[AnnotationDbi biomaRt BioNet cellHTS2 graph GSEABase igraph RankProd]; };
+  HTSeqGenie = derive2 { name="HTSeqGenie"; version="4.8.0"; sha256="0b7j6fbww9336ph4xmw8gvln5b6iy3fmcsx5ggxjln8vdy8ca4yi"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment VariantAnnotation VariantTools]; };
+  HTqPCR = derive2 { name="HTqPCR"; version="1.32.0"; sha256="0bzygl0mk35y6zwixsqxv4k3hdwjj77hia97bdj4bngm1x5qllai"; depends=[affy Biobase gplots limma RColorBrewer]; };
+  Harman = derive2 { name="Harman"; version="1.6.0"; sha256="17s3kxldvfnk5j20n0csbx967xa4npb5x0wy7whhb6zdk9dw7g6q"; depends=[Rcpp]; };
+  Harshlight = derive2 { name="Harshlight"; version="1.50.0"; sha256="0jcl49dgb6h3s0yh0ym7sfmsfyc2f3ykvnizp66i18by7fa5va60"; depends=[affy altcdfenvs Biobase]; };
+  Heatplus = derive2 { name="Heatplus"; version="2.24.0"; sha256="0lil1yfqqga9l6qrgismngvary4495zmi4yk01izpcx29pk8zn6n"; depends=[RColorBrewer]; };
+  HelloRanges = derive2 { name="HelloRanges"; version="1.4.0"; sha256="0pbikr79lh6iij044sy6fw6i2bqigmna4hb806kyihclpm0rs3y2"; depends=[BiocGenerics Biostrings BSgenome docopt GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; };
+  HiCcompare = derive2 { name="HiCcompare"; version="1.0.0"; sha256="1r25l4q7rpzjhz02ys78a4p8ga3wrd231znk84pp7xgka3xpprv0"; depends=[BiocParallel data_table dplyr GenomicRanges ggplot2 gridExtra gtools InteractionSet IRanges KernSmooth mgcv pheatmap QDNAseq S4Vectors]; };
+  HiTC = derive2 { name="HiTC"; version="1.22.0"; sha256="0288xa1jy6nzvz2ha07csmp6dirjw5r7p9vy69q2wsbyzr02ymkp"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; };
+  HilbertCurve = derive2 { name="HilbertCurve"; version="1.9.1"; sha256="1k3l3i8fpfhzsdwrlkyp7k8rpkyg51lx6c776vd8nm4f2nqn7z36"; depends=[circlize GenomicRanges HilbertVis IRanges png]; };
+  HilbertVis = derive2 { name="HilbertVis"; version="1.36.0"; sha256="1yilvi5pcr0z5h0n0mf7hfrjc7cl44vn6svczlmw57n8pxf8p35g"; depends=[lattice]; };
+  HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.36.0"; sha256="12bwk0lj2s6jgrpwigc4jd80irzxqjwc8smq1dhsm6pj62v0gvlk"; depends=[HilbertVis]; };
+  HybridMTest = derive2 { name="HybridMTest"; version="1.22.0"; sha256="0lrfqalazszcywv58q1grmxp3dn6yxgi3xmwi53cq5bacizqdq3j"; depends=[Biobase fdrtool MASS survival]; };
+  IHW = derive2 { name="IHW"; version="1.6.0"; sha256="14vbi9p3bi09qc0vjnwksfgv5c95ka468c1w5qjj6v99cyj548id"; depends=[BiocGenerics fdrtool lpsymphony slam]; };
+  IMAS = derive2 { name="IMAS"; version="1.2.0"; sha256="0568llff8d11fykanhy3ja1wbi7hidwixyql8zbi04nfxskpsa6k"; depends=[AnnotationDbi BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfortify ggplot2 gridExtra IRanges IVAS lattice lme4 Matrix Rsamtools S4Vectors survival]; };
+  IMPCdata = derive2 { name="IMPCdata"; version="1.14.0"; sha256="1aaj9fvp6f8zqwadkms23lghf65rghb729m84rdv4c7q4flb96sy"; depends=[rjson]; };
+  INPower = derive2 { name="INPower"; version="1.14.0"; sha256="17d53fa96pqh7xhvhmydrvy00x3dvba6npapc5hngzzlr7pc07bv"; depends=[mvtnorm]; };
+  INSPEcT = derive2 { name="INSPEcT"; version="1.8.0"; sha256="1v3zyiqc0b5rhbkx7w7r2a7m88jgafp84vsgrs9wi8fhs8mvyvd1"; depends=[Biobase BiocGenerics BiocParallel deSolve GenomicAlignments GenomicFeatures GenomicRanges IRanges preprocessCore pROC rootSolve Rsamtools S4Vectors]; };
+  IONiseR = derive2 { name="IONiseR"; version="2.2.0"; sha256="1qrdgm94xpm075nlgv9zklm7pwfbfjj2d45lv0gs11qj4xi8rccx"; depends=[BiocGenerics BiocParallel Biostrings bit64 dplyr ggplot2 magrittr rhdf5 ShortRead stringr tibble tidyr XVector]; };
+  IPO = derive2 { name="IPO"; version="1.4.1"; sha256="0bskznr2w1pfanxfnffg1gdjvwii3wkpsgmz96pjxa23yw1ykpgp"; depends=[BiocParallel CAMERA rsm xcms]; };
+  IPPD = derive2 { name="IPPD"; version="1.26.0"; sha256="0s2xl5k9sr8kqqn9hbi0kbqmn4xm78fnsqg7g82w69ah3v7myl1f"; depends=[bitops digest MASS Matrix XML]; };
+  IRanges = derive2 { name="IRanges"; version="2.12.0"; sha256="1vqczb9wlxsmpwpqig6j1dmiblcfpq6mgnq8qwzcrvddm4cp47m5"; depends=[BiocGenerics S4Vectors]; };
+  ISoLDE = derive2 { name="ISoLDE"; version="1.6.0"; sha256="02xl3a9pdwdyjm0iyza43b26bvvpxz13z30kbwv4g3h7w5q3szvr"; depends=[]; };
+  ITALICS = derive2 { name="ITALICS"; version="2.38.0"; sha256="047s6q6l2zv3d01hw0qxxshq69cvz8d6cq631n5r6i4bp2pnay32"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; };
+  IVAS = derive2 { name="IVAS"; version="1.98.0"; sha256="1ngijwnx07i7i0pj72dz6c6kims0n5cjcs75yaw5dfwl00xn9p2a"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges ggfortify ggplot2 IRanges lme4 Matrix S4Vectors]; };
+  IWTomics = derive2 { name="IWTomics"; version="1.2.0"; sha256="1ndpyikxf4z4p7xmmpbd4h7mv9pcdjds0ziwvzi55r486065i2z1"; depends=[fda GenomicRanges gtable IRanges KernSmooth S4Vectors]; };
+  Icens = derive2 { name="Icens"; version="1.50.0"; sha256="19aidmg2f7ij1zak8cxy4y8y1dbhgb17y87zkw8829zh2diz04hm"; depends=[survival]; };
+  IdMappingAnalysis = derive2 { name="IdMappingAnalysis"; version="1.22.0"; sha256="0dxrylxdyi22x7bsdv70rkwi3j6q0gyddhx48d9f84dsi51zimz4"; depends=[Biobase boot mclust R_oo rChoiceDialogs RColorBrewer]; };
+  IdMappingRetrieval = derive2 { name="IdMappingRetrieval"; version="1.26.0"; sha256="19y4xjj5fakyf7mdc33r9lygayq4clgm03410iw3si5vy2ib720l"; depends=[AffyCompatible biomaRt ENVISIONQuery R_methodsS3 R_oo rChoiceDialogs RCurl XML]; };
+  IdeoViz = derive2 { name="IdeoViz"; version="1.12.0"; sha256="1ihfxp4dngwk72nxw36w15d28cpz4y0qxagap4km76i51c9jm855"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; };
+  Imetagene = derive2 { name="Imetagene"; version="1.8.0"; sha256="1xgdwp5xvl57xll1i691c0fqnj5rp53l86my3wvbxwd9jdj6rz6v"; depends=[d3heatmap ggplot2 metagene shiny shinyBS shinyFiles shinythemes]; };
+  ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.6.2"; sha256="14ad6ar2pprisahv433w20whpnrssr0hfsm59d6m3bkwaff4hb8h"; depends=[Biobase data_table ggplot2 gplots gtools heatmaply httr pheatmap plotly preprocessCore reshape2 rjson Rlabkey rmarkdown scales]; };
+  ImpulseDE = derive2 { name="ImpulseDE"; version="1.4.0"; sha256="04l1rkpmk682af5yw9whj8ngq788kmzf7p76paayb6ihamhkcfq1"; depends=[amap boot]; };
+  ImpulseDE2 = derive2 { name="ImpulseDE2"; version="1.2.0"; sha256="11gr6ycg46ywkrwrnarn5a582nq8x47mhlg140d7fw2wiy20b8ln"; depends=[Biobase BiocParallel circlize ComplexHeatmap cowplot DESeq2 ggplot2 knitr Matrix S4Vectors SummarizedExperiment]; };
+  InPAS = derive2 { name="InPAS"; version="1.10.0"; sha256="1svpjpkqv8va2mrf3b366rqbiwy73jf5rxc32md4arjprs1kb13v"; depends=[AnnotationDbi Biobase BiocParallel BSgenome cleanUpdTSeq depmixS4 GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges limma preprocessCore S4Vectors seqinr]; };
+  IntEREst = derive2 { name="IntEREst"; version="1.2.2"; sha256="1ck2kmb25wf6rw97mag8l99g05mwaxs2lhpv1722inqq24q0smmq"; depends=[BiocGenerics BiocParallel Biostrings DBI DESeq2 DEXSeq edgeR GenomicAlignments GenomicFeatures GenomicRanges IRanges RMySQL Rsamtools S4Vectors seqinr seqLogo SummarizedExperiment]; };
+  InterMineR = derive2 { name="InterMineR"; version="1.0.0"; sha256="0gb493spb89c4qz1s9ng9g8w136zcqdnq0rlpqqw3bxdpqck83fb"; depends=[Biostrings GenomicRanges httr igraph IRanges RCurl RJSONIO S4Vectors sqldf SummarizedExperiment XML xml2]; };
+  InteractionSet = derive2 { name="InteractionSet"; version="1.6.0"; sha256="1wmp4dqxj19dbd97r6zfzv81j06vh9j7bpypcxib8f2lyx26cwm9"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix Rcpp S4Vectors SummarizedExperiment]; };
+  IntramiRExploreR = derive2 { name="IntramiRExploreR"; version="1.0.0"; sha256="096503aaiznkcpxksxjq95lfb6pcbdvimns8ahc56vr6m5nqnpfx"; depends=[FGNet igraph knitr]; };
+  IrisSpatialFeatures = derive2 { name="IrisSpatialFeatures"; version="1.2.0"; sha256="0glx0p5qjfs2fk48qcdi7w14iyj0chk1plv5r69c8iyyc4frd7xk"; depends=[data_table dplyr ggplot2 gplots magrittr RColorBrewer Rcpp SpatialTools spatstat tibble tiff]; };
+  IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.14.0"; sha256="085clvn2wgqicvmd2c0h9ah59l6bwy0l6y8lq69ajy7il1grm4qq"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust orQA RColorBrewer Rcpp relimp tkrplot xlsx]; };
+  IsoformSwitchAnalyzeR = derive2 { name="IsoformSwitchAnalyzeR"; version="1.0.0"; sha256="0bb3y3r26kwgx84lhr52fyrk9i2jjwhnarr3wdxpyj4j00w2dq1f"; depends=[Biostrings BSgenome cummeRbund DBI DRIMSeq edgeR GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges plyr RColorBrewer reshape2 rtracklayer spliceR tximport VennDiagram]; };
+  JASPAR2018 = derive2 { name="JASPAR2018"; version="1.0.0"; sha256="0kx6bfcmp9a0rka0pgpl7lsaw79imcd6zrpgzqg5l1031vlyplc4"; depends=[]; };
+  JunctionSeq = derive2 { name="JunctionSeq"; version="1.8.0"; sha256="01db6xpmci0kldwi2x8xfmsbi4iywghcz8spd5601dd03cnmxxrk"; depends=[Biobase BiocGenerics BiocParallel DESeq2 genefilter geneplotter GenomicRanges Hmisc IRanges locfit plotrix Rcpp RcppArmadillo S4Vectors statmod stringr SummarizedExperiment]; };
+  KCsmart = derive2 { name="KCsmart"; version="2.36.0"; sha256="0a1flc9bm4w0rfy3jf8fim7c0ddy9zjln0kgyyi3ps7n4rk4n75q"; depends=[BiocGenerics KernSmooth multtest siggenes]; };
+  KEGGREST = derive2 { name="KEGGREST"; version="1.18.1"; sha256="02gwmm79djj55a90dzc80hlgwc6bafl7xd7fnx2q59pk945k3z9c"; depends=[Biostrings httr png]; };
+  KEGGgraph = derive2 { name="KEGGgraph"; version="1.38.0"; sha256="028icymxshg4v80b5xhvpdqm87qxi9s6yycp2z5w55mhw8l22azw"; depends=[graph XML]; };
+  KEGGlincs = derive2 { name="KEGGlincs"; version="1.4.0"; sha256="17l8hd072052hd8wfnxj06455qdgdx2bk456rl8ga6bjqbn0r4nq"; depends=[AnnotationDbi gtools hgu133a_db httr igraph KEGGgraph KEGGREST KOdata org_Hs_eg_db plyr RJSONIO XML]; };
+  KEGGprofile = derive2 { name="KEGGprofile"; version="1.20.0"; sha256="0kd5wpnqpp9r1fy12islaj09qfnvkdf705rmapbzly47abqsziad"; depends=[AnnotationDbi biomaRt KEGG_db KEGGREST png RCurl TeachingDemos XML]; };
+  LBE = derive2 { name="LBE"; version="1.46.0"; sha256="0706nydzjl61ycnvck4xmpfk5x3pa2kllfivyxcjajhwlb4zr6r0"; depends=[]; };
+  LEA = derive2 { name="LEA"; version="2.0.0"; sha256="1h1x2z2mamlvb4cf7541b1f7jh25i4lfhjm0nl5sfr1la1dmgsdn"; depends=[]; };
+  LINC = derive2 { name="LINC"; version="1.6.0"; sha256="0jlbrcpmsk360mrqdfknkbc6zl87f7fxssd9hf2dp8fqkl3g1sfd"; depends=[ape Biobase clusterProfiler DOSE ggplot2 ggtree gridExtra org_Hs_eg_db png Rcpp ReactomePA reshape2 sva]; };
+  LMGene = derive2 { name="LMGene"; version="2.34.0"; sha256="1nvv7dmpxgkwg9js3dzy09863bmm5xm068dmr1sl9jbjmx4lwwn0"; depends=[affy Biobase multtest survival]; };
+  LOBSTAHS = derive2 { name="LOBSTAHS"; version="1.4.0"; sha256="1svy7mav82rq60bw3akriinb9kfbj02ysl1kcnhvdqicdb3ms5x4"; depends=[CAMERA xcms]; };
+  LOLA = derive2 { name="LOLA"; version="1.8.0"; sha256="0wkgibvrh8ddqqbms7id8yqi4ic0nf1ppdjxzg86xafglzz8m26d"; depends=[BiocGenerics data_table GenomicRanges IRanges reshape2 S4Vectors]; };
+  LPE = derive2 { name="LPE"; version="1.52.0"; sha256="10fm0p1khfypgghn4zp9w6bxc78mwvs39vcvhvpyrppr5xfqbn4c"; depends=[]; };
+  LPEadj = derive2 { name="LPEadj"; version="1.38.0"; sha256="10h0mja8zz5cys8aa07vsp58h178bs66izwh0i6jc5b44hcdxrd2"; depends=[LPE]; };
+  LVSmiRNA = derive2 { name="LVSmiRNA"; version="1.28.0"; sha256="093ndks9sx81q0hw6y5nz3dfb9w1adi0g3h6jqk5bl7h41lnrldw"; depends=[affy Biobase BiocGenerics limma MASS quantreg SparseM vsn zlibbioc]; };
+  LedPred = derive2 { name="LedPred"; version="1.12.0"; sha256="1lhl6gkya72d4h0v32y3jpaz69g0l7n3v8ahgsz6dil84m4ksc8w"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; };
+  Linnorm = derive2 { name="Linnorm"; version="2.2.0"; sha256="0a1zly4shxmq51zjdrmr7hsvmyaqs1xnhrisq93z4djrxq0paj0v"; depends=[amap apcluster ellipse fastcluster fpc ggdendro ggplot2 gmodels igraph limma MASS mclust Rcpp RcppArmadillo Rtsne statmod vegan zoo]; };
+  LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.32.0"; sha256="0l175s1376wlkb0lva2xafq8p5n3011ldqm3dqcnhkb8mxfqkn4f"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; };
+  Logolas = derive2 { name="Logolas"; version="1.2.0"; sha256="12syxp90dam9094xfgjvb820p14hgxx2xj08di9an12kb6h5s13b"; depends=[]; };
+  LowMACA = derive2 { name="LowMACA"; version="1.10.0"; sha256="1qn60nrjr9aiw44wyp0q0qhsjm8hl3rzlc8wi6g9k3jaq2jq4v41"; depends=[BiocParallel Biostrings cgdsr data_table LowMACAAnnotation motifStack RColorBrewer reshape2 stringr]; };
+  LymphoSeq = derive2 { name="LymphoSeq"; version="1.6.0"; sha256="1zh7wzw49nz3sf58m8rqi0dkgi9h9zff8jpdc4065pgjwg05r39s"; depends=[Biostrings circlize data_table dplyr ggplot2 ggtree ineq LymphoSeqDB msa phangorn plyr RColorBrewer reshape stringdist UpSetR VennDiagram]; };
+  M3C = derive2 { name="M3C"; version="1.0.0"; sha256="0d25abzyq74g7faqyig4rpg963wbb39p9n420hdwrr7scbyij0v3"; depends=[cluster doParallel doSNOW foreach ggplot2 Matrix matrixcalc NMF RColorBrewer]; };
+  M3D = derive2 { name="M3D"; version="1.12.0"; sha256="1w3bxwl19xrs3aigbzqa9n3v5yz6f7216ngyyilwhplnivq1k7zl"; depends=[BiocGenerics BiSeq GenomicRanges IRanges Rcpp S4Vectors SummarizedExperiment]; };
+  M3Drop = derive2 { name="M3Drop"; version="1.4.0"; sha256="12s0nzih42gsr57532z0nmn6gccq40hfazsfqbl97w681ngfnk94"; depends=[bbmle gplots numDeriv RColorBrewer statmod]; };
+  MADSEQ = derive2 { name="MADSEQ"; version="1.4.1"; sha256="0yc0ad7idb404ccw89w2lrqcfr9fdjlg876l8wsar6xgq7pa0lhd"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM zlibbioc]; };
+  MAIT = derive2 { name="MAIT"; version="1.12.0"; sha256="1l90yy6m2x83bka9222wcyim005pvpimja7ipj9f1bizymd5ivls"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; };
+  MANOR = derive2 { name="MANOR"; version="1.50.0"; sha256="039msah06ga9vxk2i4qm7kv5lsxrmfr0ws9mdmh0bw6kv7l61wsr"; depends=[GLAD]; };
+  MAST = derive2 { name="MAST"; version="1.4.1"; sha256="0waqz85gzyv09cjf4shz9dydazh0knczylh8854icn1i87x5sjsj"; depends=[abind Biobase BiocGenerics data_table ggplot2 plyr reshape2 S4Vectors stringr SummarizedExperiment]; };
+  MBASED = derive2 { name="MBASED"; version="1.12.0"; sha256="1ys9m3g2c93wck6cj5n0vcdzca7f4qcxgc14zhabbs4pv70qc8mf"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; };
+  MBAmethyl = derive2 { name="MBAmethyl"; version="1.12.0"; sha256="1h2hb4lbs1p101zd6k5xpp5ashib9iqrgkp2afdj0v4s8v9f2h09"; depends=[]; };
+  MBCB = derive2 { name="MBCB"; version="1.32.0"; sha256="0amqmzi54dvkgzylavy0dbv973s2p02jppd5vzqzkrqs8amb3r4c"; depends=[preprocessCore tcltk2]; };
+  MBttest = derive2 { name="MBttest"; version="1.5.0"; sha256="0gswdh61mmqn7h4d6vwvis08lxx383ynj6pk2va3z8bn25qki5lz"; depends=[gplots gtools]; };
+  MCRestimate = derive2 { name="MCRestimate"; version="2.34.0"; sha256="1n4abpm6ld4ap87pgrv3mfr1aycdjb4hjg3fm699rckyl9qynjr3"; depends=[Biobase e1071 golubEsets pamr randomForest RColorBrewer]; };
+  MCbiclust = derive2 { name="MCbiclust"; version="1.2.1"; sha256="1yqm6fwap4553nmh1dl3vg87hixljzm097wcv4l6sd5sd0sg63c7"; depends=[AnnotationDbi BiocParallel cluster GGally ggplot2 GO_db org_Hs_eg_db scales WGCNA]; };
+  MEAL = derive2 { name="MEAL"; version="1.8.0"; sha256="0mccjr21jvmwlszhb9qixm7dr83gkhm2hjh9yrn11d22cm9r6g1q"; depends=[Biobase BiocGenerics DMRcate doParallel GenomicRanges ggplot2 Gviz IRanges isva limma matrixStats minfi missMethyl MultiDataSet permute S4Vectors SmartSVA SNPassoc snpStats SummarizedExperiment vegan]; };
+  MEDIPS = derive2 { name="MEDIPS"; version="1.30.0"; sha256="06mm424g3rc8j64wfyv6w40m106wifzhi91nsbpi317fg98qfd3d"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; };
+  MEDME = derive2 { name="MEDME"; version="1.38.0"; sha256="137p9z1g3z4r7q3nsrpsp2gbm657nrbrrq96ph1mykvv41ylq59p"; depends=[Biostrings drc MASS]; };
+  MEIGOR = derive2 { name="MEIGOR"; version="1.12.0"; sha256="05ww7an7vk67rjcf31g9aq033w6yhx9dagrhj3ki5ks7hcwig1yv"; depends=[CNORode deSolve Rsolnp snowfall]; };
+  MGFM = derive2 { name="MGFM"; version="1.12.0"; sha256="0yjr14anr5rny6g1508nrw905d4b01jh34vpwi8737p1q4d9bzis"; depends=[annotate AnnotationDbi]; };
+  MGFR = derive2 { name="MGFR"; version="1.4.0"; sha256="04nxg65m1s8qyq8sbs8733d541r0vcmabz27w03vs87f0dbxhg11"; depends=[annotate biomaRt]; };
+  MIGSA = derive2 { name="MIGSA"; version="1.2.0"; sha256="0ih5i1acb7igbcqk7wykxhncvl5vbgx34gl5nqc65adpqb0199fl"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel data_table edgeR futile_logger ggdendro ggplot2 GO_db GOstats graph GSEABase limma matrixStats mGSZ org_Hs_eg_db RBGL reshape2 Rgraphviz RJSONIO vegan]; };
+  MIMOSA = derive2 { name="MIMOSA"; version="1.16.0"; sha256="0rnxr7gxcps2raxka8c2x58liwwc75acwpahi2xc1dl8c2z4jpvx"; depends=[Biobase coda data_table Formula ggplot2 MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape scales testthat]; };
+  MIRA = derive2 { name="MIRA"; version="1.0.1"; sha256="0dapp1q6vrdixz8n2g6ivav4d4si3wg1na7cg5jirb22mwi2rrpk"; depends=[Biobase BiocGenerics bsseq data_table GenomicRanges ggplot2 IRanges S4Vectors]; };
+  MLInterfaces = derive2 { name="MLInterfaces"; version="1.58.0"; sha256="1py603bykvnzyq15rcqvq1nly3l6chh5zh6x4biwdn0smyjlnkns"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter MASS mlbench pls RColorBrewer rda rpart sfsmisc shiny threejs]; };
+  MLP = derive2 { name="MLP"; version="1.26.0"; sha256="0mhaw39rbzrnrminvsiq6vrdrmf3zm2zqg3ilnsq1zw8bm2bsbh7"; depends=[affy AnnotationDbi gdata gmodels gplots gtools plotrix]; };
+  MLSeq = derive2 { name="MLSeq"; version="1.18.0"; sha256="1r6b33ic2lnj3v2qzs7r904rfyibz96yr35mgpiz4zzsax4ar6v4"; depends=[Biobase caret DESeq2 edgeR limma randomForest]; };
+  MMDiff2 = derive2 { name="MMDiff2"; version="1.6.0"; sha256="13f96dw630hadqa0z83ispdni728g7zl12xj8zxrf5hvw1c1hs2h"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; };
+  MODA = derive2 { name="MODA"; version="1.4.0"; sha256="1baxma9g4ir24fxwxgm3hphvv8j521wgmvy86fcl2rai6ayy8liy"; depends=[AMOUNTAIN cluster dynamicTreeCut igraph RColorBrewer WGCNA]; };
+  MPFE = derive2 { name="MPFE"; version="1.14.0"; sha256="0jh1s0skaw16d94149hisjnfn2hk6z7hdd4ishzwziqbwag60z0w"; depends=[]; };
+  MSGFgui = derive2 { name="MSGFgui"; version="1.12.0"; sha256="1yr1m12svmcx7y1524j8dw91rf0gn28gs9hy7gan88lnjv4hlnh9"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; };
+  MSGFplus = derive2 { name="MSGFplus"; version="1.12.0"; sha256="1xpzcmvlk394sqwl2lx8ihhgsnrfifpkrbh79b7lwwjzijr37npv"; depends=[mzID ProtGenerics]; };
+  MSnID = derive2 { name="MSnID"; version="1.12.1"; sha256="1zw508kk4f8brg69674wp18gqkpx2kpya5f6x9cl3qng7v4h5pxx"; depends=[Biobase data_table doParallel dplyr foreach iterators MSnbase mzID mzR ProtGenerics R_cache Rcpp reshape2]; };
+  MSnbase = derive2 { name="MSnbase"; version="2.4.2"; sha256="1ig64bf881p118dwqfr0ry41m7yhnyv165smv8fdwfv7sb6sagif"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant mzID mzR pcaMethods plyr preprocessCore ProtGenerics Rcpp S4Vectors vsn XML]; };
+  MSstats = derive2 { name="MSstats"; version="3.10.6"; sha256="03a9069zv0m8m28a9rh53m12rhgrc299frhqiwl1jj6b82myv5hp"; depends=[broom data_table doSNOW dplyr foreach ggplot2 ggrepel gplots limma lme4 marray MASS minpack_lm MSnbase preprocessCore purrr Rcpp reshape2 snow stringr survival tidyr]; };
+  MSstatsQC = derive2 { name="MSstatsQC"; version="1.0.0"; sha256="1987j8l5q6cyyg8wpyv1mgv5s3qwdxvdb2c2qhl5svaksxlni2hi"; depends=[dplyr ggExtra ggplot2 MSnbase plotly qcmetrics RecordLinkage]; };
+  MVCClass = derive2 { name="MVCClass"; version="1.52.0"; sha256="03ym7qlybs99ir629h9mmm2kqpmx1lzliql7qgbfiydpynvplahy"; depends=[]; };
+  MWASTools = derive2 { name="MWASTools"; version="1.2.0"; sha256="0pgb6qnqqzz6y22cbxivx04v0rak76i2kc3aasdrz324xjv5hq09"; depends=[boot car ComplexHeatmap ggplot2 glm2 gridExtra igraph KEGGgraph KEGGREST ppcor qvalue RCurl SummarizedExperiment]; };
+  MantelCorr = derive2 { name="MantelCorr"; version="1.48.0"; sha256="0jnj6cyvpk41pi9f021wgqjnrns3xcixa7gbnqaa83gv8zrm2d8n"; depends=[]; };
+  MassArray = derive2 { name="MassArray"; version="1.30.0"; sha256="113d6hkzx4gn2n58ljm6awfzyjzvsa7q4rhybnfqv9rfh93q1iin"; depends=[]; };
+  MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.44.0"; sha256="1q0m4s4f7pajkc99aijaskcd4qg50w98bllsr89154vnrcaszhz0"; depends=[waveslim]; };
+  MatrixRider = derive2 { name="MatrixRider"; version="1.10.0"; sha256="07msw0h3mgn9l8kdc1zzijxy62dfawrxx8rd2xw6djammb9gl1p5"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; };
+  MaxContrastProjection = derive2 { name="MaxContrastProjection"; version="1.2.0"; sha256="0a5jsm0rrxw0il17bysjy7inzf7ay9lrzi1kyxifl4k64j8ssj3r"; depends=[EBImage]; };
+  MeSHDbi = derive2 { name="MeSHDbi"; version="1.14.0"; sha256="10ir9ma04cwn2kbd10anv4yqljh5p60lq53da8191psv82ni9cfx"; depends=[AnnotationDbi Biobase BiocGenerics RSQLite]; };
+  MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.50.0"; sha256="0gky9yhd7k0w83ysnjjy21m8wwjg5k5y85ba19bc1k8412x5alj8"; depends=[]; };
+  MergeMaid = derive2 { name="MergeMaid"; version="2.50.0"; sha256="0bsjrm6wm732saw07l2y4mmbsdgxk5b4x74zsjjv4k92dbfbwraa"; depends=[Biobase MASS survival]; };
+  Mergeomics = derive2 { name="Mergeomics"; version="1.6.0"; sha256="1m2d2clg3mj8m365zcivqdn81ira83m69cxr1s4syrl1a2cymkz6"; depends=[]; };
+  MetCirc = derive2 { name="MetCirc"; version="1.6.0"; sha256="106anz431236gn0himc273h9w721wk6l9gmkilydviflb0x990j3"; depends=[amap circlize scales shiny]; };
+  MetaCyto = derive2 { name="MetaCyto"; version="1.4.0"; sha256="036j7mnfgvra1ryzqiw7mpsavc0akmalryswq6n9z02gmns5sij1"; depends=[cluster fastcluster flowCore FlowSOM ggplot2 metafor tidyr]; };
+  Metab = derive2 { name="Metab"; version="1.12.0"; sha256="0gnpdhvzhqs3ajdj439x2wr3b3yzx5qgb6brlw9hxz63l4fpipn7"; depends=[pander svDialogs xcms]; };
+  MetaboSignal = derive2 { name="MetaboSignal"; version="1.8.0"; sha256="0qydccfbyys8gfalzcadx0hiljq2ias5qphwsdxglh1xlqkh2919"; depends=[AnnotationDbi biomaRt EnsDb_Hsapiens_v75 hpar igraph KEGGgraph KEGGREST MWASTools mygene org_Hs_eg_db RCurl]; };
+  MethPed = derive2 { name="MethPed"; version="1.6.0"; sha256="0m442v7akv5r274hx56r6vkcsg4ha897ira4mbkiqfsrxscmajh2"; depends=[Biobase randomForest]; };
+  MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.10.0"; sha256="14xd5h6pgla2kh1l1rn7x2ddal98ypazqr120kyifqf05y5sf1ph"; depends=[Biostrings gplots seqinr stringr]; };
+  MethylAid = derive2 { name="MethylAid"; version="1.12.0"; sha256="1km22cscxkgyx6blbsrnh5q8pj7fmw5caqnj72bzi76zw8mr0fli"; depends=[Biobase BiocGenerics BiocParallel ggplot2 gridBase hexbin matrixStats minfi RColorBrewer shiny SummarizedExperiment]; };
+  MethylMix = derive2 { name="MethylMix"; version="2.8.0"; sha256="0dbsmkiidc83hncqkw4g1kz7dwdr631s4a3a982v7krfsgvcqwyi"; depends=[data_table digest foreach ggplot2 impute limma R_matlab RColorBrewer RCurl RPMM]; };
+  MethylSeekR = derive2 { name="MethylSeekR"; version="1.18.0"; sha256="0d1ya2jbgqk9s4clpsaipm4l9585ycxg5bmhg4dmmcph0w6dcsjl"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; };
+  Mfuzz = derive2 { name="Mfuzz"; version="2.38.0"; sha256="18c83g8ydbb24v1n0rcp3lv533ikhs6wwchvmdbsy2whlsy3sv1i"; depends=[Biobase e1071 tkWidgets]; };
+  MiChip = derive2 { name="MiChip"; version="1.32.0"; sha256="1jbwri284jzjaxml4ddz4kcmhhz48naqiydj4ixc85hk3gpjglaa"; depends=[Biobase]; };
+  MiPP = derive2 { name="MiPP"; version="1.50.0"; sha256="1kdi0m4856dsal6qx458x35ybnaj960ys83dgg5w4c8420k9mv9m"; depends=[Biobase e1071 MASS]; };
+  MiRaGE = derive2 { name="MiRaGE"; version="1.20.0"; sha256="1jbs427vpld18l83s5dngijc8rgllqvrili8gv4in20nr6dyk9hi"; depends=[AnnotationDbi Biobase BiocGenerics S4Vectors]; };
+  MineICA = derive2 { name="MineICA"; version="1.18.0"; sha256="1zdq5i14ksm8rirbry6j1dh56r1bhy5yvfzrxfjkm94lynqcdpdy"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; };
+  MinimumDistance = derive2 { name="MinimumDistance"; version="1.22.0"; sha256="1j2g0ji1ac9608b965rr9vvbhlcbvirqypngh11havh3vn54m9rf"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; };
+  Mirsynergy = derive2 { name="Mirsynergy"; version="1.14.0"; sha256="1mwcv1fb3vda4ilmvwjrwb2qg65bgdxsvd2jd9ndaccxb7m3c2lk"; depends=[ggplot2 gridExtra igraph Matrix RColorBrewer reshape scales]; };
+  MmPalateMiRNA = derive2 { name="MmPalateMiRNA"; version="1.28.0"; sha256="058nvymnnzd61a7x2vpzic1s2nm3q520cnfdhd6i09isg6kqr6c8"; depends=[Biobase lattice limma statmod vsn xtable]; };
+  MoPS = derive2 { name="MoPS"; version="1.12.0"; sha256="0g4awrm90kjnk66b291y2n5vwwwzpdb3kaq96sxfc5a1af8q5q81"; depends=[Biobase]; };
+  MoonlightR = derive2 { name="MoonlightR"; version="1.4.0"; sha256="0kisic6bzp2gy1yjg717izbkirlvrwb1wndckd2yvncrjzpidcq6"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; };
+  MotIV = derive2 { name="MotIV"; version="1.34.0"; sha256="0lvkzbw328mxyp2pd95ymi1nbk78jx880h00jxwdf17a5rkikgh6"; depends=[BiocGenerics Biostrings IRanges lattice rGADEM S4Vectors]; };
+  MotifDb = derive2 { name="MotifDb"; version="1.20.0"; sha256="16gk7sbrk188kv3mdsnvcnfzvd2dyxm7wmmwvcqz560x0xn0l0k9"; depends=[BiocGenerics Biostrings IRanges rtracklayer S4Vectors splitstackshape]; };
+  Mulcom = derive2 { name="Mulcom"; version="1.28.0"; sha256="1dh4sn64n1db2hlbx58mb49kmfassr1r92d9lphzzqhsicq78p8c"; depends=[Biobase fields]; };
+  MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.4.9"; sha256="0kbr2nfxkny9y6hgijr2xpzczs0ijv0g7nh37yrzgkh10rwjsflq"; depends=[Biobase BiocGenerics GenomicRanges IRanges reshape2 S4Vectors shiny shinydashboard SummarizedExperiment tidyr]; };
+  MultiDataSet = derive2 { name="MultiDataSet"; version="1.6.0"; sha256="0h187dkqn63m6askai30x31va24hiv4ig0kxvp9xraz7n9zfr24g"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggrepel IRanges limma qqman S4Vectors SummarizedExperiment]; };
+  MultiMed = derive2 { name="MultiMed"; version="1.12.0"; sha256="1b48iv34bnsbyg7j70kwi8iyikc1hxlcfmaxsc97249dfq71rfab"; depends=[]; };
+  MutationalPatterns = derive2 { name="MutationalPatterns"; version="1.4.2"; sha256="08ay9h5cqsi8ypb6r0g4rfa5l1g06jgfzl64wmhgz134yqbl7vfv"; depends=[BiocGenerics Biostrings cowplot GenomeInfoDb GenomicRanges ggdendro ggplot2 gridExtra IRanges NMF plyr pracma reshape2 S4Vectors SummarizedExperiment VariantAnnotation]; };
+  NADfinder = derive2 { name="NADfinder"; version="1.2.0"; sha256="0npzbgbpwir4jv8h4giar9w8vjy3rivk55bimqd9bq7m83iwqapq"; depends=[baseline BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges limma rtracklayer S4Vectors signal SummarizedExperiment trackViewer]; };
+  NCIgraph = derive2 { name="NCIgraph"; version="1.26.0"; sha256="094dnqj1gss4dh8hsc8y9k98b0g33n7yy714kjavcd16glp4w7i0"; depends=[graph KEGGgraph R_methodsS3 RBGL RCy3]; };
+  NGScopy = derive2 { name="NGScopy"; version="1.12.0"; sha256="1aibq3rbs52vyhcx388p7szax7v8ac023pxayqmn2xq3kzj172ah"; depends=[changepoint rbamtools Xmisc]; };
+  NOISeq = derive2 { name="NOISeq"; version="2.22.1"; sha256="0v04597hwvr4y96789samj6jpgipsdv15hsmkgs3pdli48cjwff3"; depends=[Biobase Matrix]; };
+  NTW = derive2 { name="NTW"; version="1.28.0"; sha256="0gkj636fmr519hylb3kc70qxmx9cw3xim0vpx60qsr0kl6h5m7hq"; depends=[mvtnorm]; };
+  NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.9.2"; sha256="1ss7q5zbqnkrv8fds2x3amjva5v8y8x4b5h1flh5paivdpv29frk"; depends=[Biobase matrixStats Rcpp]; };
+  NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.10.0"; sha256="0r5yf2vgn0182074fa46ziclx9dbm60j4n7yck66ck81xp0jpwps"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; };
+  NarrowPeaks = derive2 { name="NarrowPeaks"; version="1.22.0"; sha256="1ai2fdckd2d383bnwwpp60yz3f67gm8xnxqm74ah8gpn3ll9dxm8"; depends=[BiocGenerics CSAR fda GenomeInfoDb GenomicRanges ICSNP IRanges S4Vectors]; };
+  NetPathMiner = derive2 { name="NetPathMiner"; version="1.14.0"; sha256="1dcpayafvarf8brd3rh9ik6ki5z2fqqzwxpxdjm5bwfb7l3ida3w"; depends=[igraph]; };
+  NetSAM = derive2 { name="NetSAM"; version="1.18.0"; sha256="05m6i3gcyvc9hzmfpj9wzim9b8p5lgv984y6805nrszr7dmhlyjv"; depends=[graph igraph seriation]; };
+  NormqPCR = derive2 { name="NormqPCR"; version="1.24.0"; sha256="0js03x4gqrqs0pv9m5ih34zrxgc8vcv3dil17wzgfimrm044z0yl"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; };
+  NuPoP = derive2 { name="NuPoP"; version="1.28.0"; sha256="1z5pgdi8l40yvbixsgajd2afyi2mkqvxgx0v4k3xxqw1w97kmrgv"; depends=[]; };
+  OCplus = derive2 { name="OCplus"; version="1.52.0"; sha256="1fxfc66b8qmcq0yq1n1z7fj5d8hw0z59b3sdypdhhyw5ddcri0lf"; depends=[akima multtest]; };
+  OGSA = derive2 { name="OGSA"; version="1.8.0"; sha256="1i6xh0y9ymxrdjywm8sayb7jgiyqgmz66wd94ja4f2na4xsw9gps"; depends=[Biobase gplots limma]; };
+  OLIN = derive2 { name="OLIN"; version="1.56.0"; sha256="18b4hadkz1zp79ing1nd9z9456a9l6wk8is6gmzj6dbbs4g1pypc"; depends=[limma locfit marray]; };
+  OLINgui = derive2 { name="OLINgui"; version="1.52.0"; sha256="115irlwwfzf7ywgbry2jwxl1h8hp6mlr9b36q509ah5c7kn58r1r"; depends=[marray OLIN tkWidgets widgetTools]; };
+  OPWeight = derive2 { name="OPWeight"; version="1.0.0"; sha256="18crhxdlxixv1qp8vc5f711g1sxwhixpd5h0vb6jr9rkyq2v942b"; depends=[MASS qvalue tibble]; };
+  OSAT = derive2 { name="OSAT"; version="1.26.0"; sha256="0nc79hh2vbqh864c9zac1pbghgx1fbq7maz4dxwl02hhpxj0187d"; depends=[]; };
+  OTUbase = derive2 { name="OTUbase"; version="1.28.0"; sha256="019c8d2dfhf2q9zq0xgj0pakymyk48ssbqnags4hhfp684af61r6"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; };
+  OmicCircos = derive2 { name="OmicCircos"; version="1.16.0"; sha256="13dw36n0lg5cafsrgkgr65al6y7jij2clyf1wzidn05p508i02m3"; depends=[GenomicRanges]; };
+  OmicsMarkeR = derive2 { name="OmicsMarkeR"; version="1.10.0"; sha256="0s7zyj3xkr74w0jw604hv3v775kqjpdgks4gkkrkfa3a1xj7xa5b"; depends=[assertive assertive_base caret caTools data_table DiscriMiner e1071 foreach gbm glmnet pamr permute plyr randomForest]; };
+  Onassis = derive2 { name="Onassis"; version="1.0.1"; sha256="11sq6f3qcq37i4blml024kb24ifcq1xplklv2i9c55wg299ni620"; depends=[AnnotationDbi data_table GEOmetadb OnassisJavaLibs rJava RSQLite SRAdb]; };
+  OncoScore = derive2 { name="OncoScore"; version="1.6.0"; sha256="02vzvvdnisx3xhr7428xdclgx90apa49h64bvp2h3nsa0vnhnj9l"; depends=[biomaRt]; };
+  OncoSimulR = derive2 { name="OncoSimulR"; version="2.8.0"; sha256="1b0myymp38j6fbd4y8ppwmsj8v9w96g8wayc20bcygm16i1zjm5k"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph nem RColorBrewer Rcpp Rgraphviz smatr]; };
+  OperaMate = derive2 { name="OperaMate"; version="1.9.0"; sha256="11ah55sl04gm8hq3gkcz3b4shq4dxdpwlwl0wn4j82ciai0k6wsm"; depends=[fBasics ggplot2 gProfileR gridExtra pheatmap reshape2 stabledist]; };
+  OrderedList = derive2 { name="OrderedList"; version="1.50.0"; sha256="1sk9ni3vyixb3vwn86vz174lfd7n7rnc8jmm1fx94pjsp9r6sbgr"; depends=[Biobase twilight]; };
+  Organism_dplyr = derive2 { name="Organism.dplyr"; version="1.6.2"; sha256="12gvdrn843334f665dqqjmlny4f6nyaql4h1181q8gfpnrc6kqwp"; depends=[AnnotationDbi AnnotationFilter BiocFileCache DBI dbplyr dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges RSQLite S4Vectors]; };
+  OrganismDbi = derive2 { name="OrganismDbi"; version="1.20.0"; sha256="0yxvhwn0m53wfwp0zi81x96argdf7cf1lpymc2as51apvfcnjdl8"; depends=[AnnotationDbi Biobase BiocGenerics BiocInstaller DBI GenomicFeatures GenomicRanges graph IRanges RBGL S4Vectors]; };
+  Oscope = derive2 { name="Oscope"; version="1.8.0"; sha256="02j7a9yifnsl3acrwgn83f12rf9xf6lgrhl28cp9p0zhr5ljf306"; depends=[BiocParallel cluster EBSeq testthat]; };
+  OutlierD = derive2 { name="OutlierD"; version="1.42.0"; sha256="1n34110czydhff8lkhfkd0hb1xcjka5a0wnvzb3wiyaiaihca26y"; depends=[Biobase quantreg]; };
+  PAA = derive2 { name="PAA"; version="1.12.0"; sha256="186gfkz9pm0bdd3zr5cnb8qzj4fqkdcrch1bmny8iwsidi3kcxph"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; };
+  PADOG = derive2 { name="PADOG"; version="1.20.0"; sha256="1lp8j2phh7f0vs6w7dc6w1lbfalqhb4ymfg5n4qci8lpzs52rm75"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGG_db KEGGdzPathwaysGEO limma nlme]; };
+  PANR = derive2 { name="PANR"; version="1.24.0"; sha256="0qvivfnydj4abva5r0yy3p1q4db70z8yjrzzm3ryvjal8hvrdh39"; depends=[igraph MASS pvclust RedeR]; };
+  PAPi = derive2 { name="PAPi"; version="1.18.0"; sha256="1flyf97qpffl9aa1sf7q4c62npk6j3jdvh3va5m0816iwq21nm9r"; depends=[KEGGREST svDialogs]; };
+  PAnnBuilder = derive2 { name="PAnnBuilder"; version="1.42.0"; sha256="144s1lzb83rb7g809v582jc0xhsw0gsy2n5wdmsd2bi3j4i8kb2q"; depends=[AnnotationDbi Biobase DBI RSQLite]; };
+  PCAN = derive2 { name="PCAN"; version="1.6.0"; sha256="0inm1kfi9xvd3jhqivxh4vzc6vsijh1z7fwzsqb35rlbi2cl7snd"; depends=[BiocParallel]; };
+  PCpheno = derive2 { name="PCpheno"; version="1.40.0"; sha256="1sgw116qif7w52va7qg8n51a40nvmhybvgr5nxlvgvrwylkhqfai"; depends=[annotate AnnotationDbi Biobase Category GO_db graph GSEABase KEGG_db ppiData ppiStats ScISI SLGI]; };
+  PECA = derive2 { name="PECA"; version="1.14.0"; sha256="1c3nbsvng951fsg9vk3yki215f3abgsxqhd025gyvs120nw4c9kv"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore ROTS]; };
+  PGA = derive2 { name="PGA"; version="1.8.0"; sha256="0x410vnwgdzdkx2i9pqj22mv8jzflswl35a6xkhkr0in47hgz806"; depends=[AnnotationDbi biomaRt Biostrings customProDB data_table GenomicFeatures GenomicRanges ggplot2 IRanges Nozzle_R1 pheatmap RCurl Rsamtools RSQLite rTANDEM rtracklayer S4Vectors stringr VariantAnnotation]; };
+  PGSEA = derive2 { name="PGSEA"; version="1.52.0"; sha256="1g0kfhrvq8hv4lpwq3p3p6fkm2bmfjmkfw9312jrwnbjj0hfwd34"; depends=[annaffy AnnotationDbi Biobase GO_db KEGG_db]; };
+  PICS = derive2 { name="PICS"; version="2.22.0"; sha256="0jb4hzswiyrqpnazfpd6wd11gdlmv18za7fyr4slxv0rc9rkf8qm"; depends=[BiocGenerics GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; };
+  PING = derive2 { name="PING"; version="2.22.0"; sha256="1lvbl3g2m643nypc0nfmhjpfv4zl7qk457kg9i7y7l1lzqwqsk0s"; depends=[BiocGenerics BSgenome chipseq fda GenomicRanges Gviz IRanges PICS S4Vectors]; };
+  PLPE = derive2 { name="PLPE"; version="1.38.0"; sha256="1w8njdkvhs7y5j78d3y591202811sb8dsldf23yiyfihbjv61vzv"; depends=[Biobase LPE MASS]; };
+  POST = derive2 { name="POST"; version="1.2.0"; sha256="1j96hqyhznq419xvvs9kkhppr6nfp0p95r5xz979pbvf8qhzypqx"; depends=[Biobase CompQuadForm GSEABase Matrix survival]; };
+  PPInfer = derive2 { name="PPInfer"; version="1.5.1"; sha256="16c9ysal2v9vr54jkg0xcmrmf58l4p6qv61fmp3qxm89r833hry9"; depends=[biomaRt fgsea ggplot2 igraph kernlab STRINGdb yeastExpData]; };
+  PREDA = derive2 { name="PREDA"; version="1.24.0"; sha256="09wwd4q4d2nzjwvnv0anaz3hhcykdaccnqc1azn56lqdajlgqzfz"; depends=[annotate Biobase lokern multtest]; };
+  PROMISE = derive2 { name="PROMISE"; version="1.30.0"; sha256="0vc847sd638xm6f7n2b77sik9kqq9kxnmmms3qy06sbkynb0rk7h"; depends=[Biobase GSEABase]; };
+  PROPER = derive2 { name="PROPER"; version="1.10.0"; sha256="0k7lpwqyflaifgs6aac55cichlf2za76gjfdijgp3f1vzvs2qn57"; depends=[edgeR]; };
+  PROPS = derive2 { name="PROPS"; version="1.0.0"; sha256="1zscpjnjazw1m0bsq5x685h0pag68ddw6x0f5h99z6h06206xzki"; depends=[Biobase bnlearn reshape2 sva]; };
+  PROcess = derive2 { name="PROcess"; version="1.54.0"; sha256="1x7hdbdhrbpp3qp6b604fiw13rid6dh57j9wgl0v3ligf84siv1q"; depends=[Icens]; };
+  PSEA = derive2 { name="PSEA"; version="1.12.0"; sha256="16l7g49vd4j06gr9lzny663md872nhdpzpsnx3niaqmd28izm9p7"; depends=[Biobase MASS]; };
+  PSICQUIC = derive2 { name="PSICQUIC"; version="1.16.4"; sha256="073lg2g1bixyiigdkixndcn29dhaznwh6v7v6ibq10h7qc5gl7k5"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; };
+  PWMEnrich = derive2 { name="PWMEnrich"; version="4.14.0"; sha256="1aw0v9s5xy3gjsyhy04zm8xgsrv4a1n4j02zspyz6rf1acakishg"; depends=[BiocGenerics Biostrings evd gdata seqLogo]; };
+  PanVizGenerator = derive2 { name="PanVizGenerator"; version="1.6.1"; sha256="1xh8p2q5znlwqcwas75kiy2fpz4va1y074z1c69p3h8h1xkivkzc"; depends=[FindMyFriends igraph jsonlite pcaMethods shiny]; };
+  Path2PPI = derive2 { name="Path2PPI"; version="1.8.0"; sha256="0mzrnq3caq2nz6lckb7gbc87kq4l4nlywy2iwwjvdn6yzsxl2hb3"; depends=[igraph]; };
+  PathNet = derive2 { name="PathNet"; version="1.18.0"; sha256="1rvm44y7fcf3mqy9c3hb5vx53b3xad20znbhkm4fqwgdb74dxyfv"; depends=[]; };
+  PathoStat = derive2 { name="PathoStat"; version="1.4.1"; sha256="1al0h4mw5lsmn4n3d76d8p9px62l4y5c5z78md2zchnam3x9ii78"; depends=[alluvial ape BatchQC BiocStyle corpcor DESeq2 dplyr DT edgeR ggplot2 gtools knitr limma matrixStats MCMCpack pander phyloseq plyr preprocessCore rentrez reshape2 rmarkdown scales shiny tidyr XML]; };
+  PathwaySplice = derive2 { name="PathwaySplice"; version="1.0.0"; sha256="1yi302xjf355xi14vx5rl6qyrm35qz9llf48fwrj7ycb41vla0fj"; depends=[AnnotationDbi AnnotationHub BiasedUrn Biobase BiocGenerics DOSE dplyr ensembldb gdata geneLenDataBase GO_db goseq gplots gridExtra htmlwidgets igraph JunctionSeq mgcv org_Hs_eg_db org_Mm_eg_db plotly RColorBrewer reshape2 S4Vectors tibble VennDiagram webshot]; };
+  Pbase = derive2 { name="Pbase"; version="0.18.0"; sha256="17ya1mmz8dqrr81vcfy3ygw490bwg26xkj72mcmba17cyy0nv11x"; depends=[AnnotationFilter Biobase BiocGenerics BiocParallel biomaRt Biostrings cleaver ensembldb GenomicRanges Gviz IRanges MSnbase mzID mzR Pviz Rcpp rtracklayer S4Vectors]; };
+  PharmacoGx = derive2 { name="PharmacoGx"; version="1.8.2"; sha256="0w77wpvi4qs8ngf5404m2cgac9zfj4jvkh88xcrz7zmmjmg2wvb9"; depends=[Biobase caTools downloader lsa magicaxis piano RColorBrewer reshape2]; };
+  PhenStat = derive2 { name="PhenStat"; version="2.14.0"; sha256="1hjj1i083ihi7c1lc1rrh3k7513xcqpybn3aaivdjw66pi1bg7vp"; depends=[car corrplot ggplot2 graph knitr lme4 logistf MASS msgps nlme nortest pingr reshape SmoothWin]; };
+  Pi = derive2 { name="Pi"; version="1.6.2"; sha256="0x3b5cs7r4cjvjjc2gx7xapzlkvg56784aj04zg6271hldpcd84j"; depends=[caret dnet GenomeInfoDb GenomicRanges ggbio ggplot2 ggrepel glmnet Gviz igraph lattice MASS Matrix plot3D randomForest ROCR scales supraHex XGR]; };
+  Pigengene = derive2 { name="Pigengene"; version="1.4.2"; sha256="15wnq91k360jblns36dgx4a24jk6a7rwkj342ja0sgfc6kvwvvqb"; depends=[bnlearn C50 GO_db graph impute MASS matrixStats partykit pheatmap preprocessCore Rgraphviz WGCNA]; };
+  Polyfit = derive2 { name="Polyfit"; version="1.12.0"; sha256="1gkn6g5hwa8ss156armxam9ky5fd7dj0k3gh1b0gy5plpzzyzv1h"; depends=[DESeq]; };
+  Prize = derive2 { name="Prize"; version="1.8.0"; sha256="1vaf4n69pb2sa6fd79988picz08d3c46cjmxfr5qf7hxay9lbwc6"; depends=[diagram ggplot2 gplots matrixcalc reshape2 stringr]; };
+  ProCoNA = derive2 { name="ProCoNA"; version="1.16.0"; sha256="06jlzcr9b6nfrlgb1wqxp7r2z8042ygjx4d2z7jzg07hqn3gymjz"; depends=[BiocGenerics flashClust GOstats MSnbase WGCNA]; };
+  Prostar = derive2 { name="Prostar"; version="1.10.4"; sha256="12kdq40qnd7a1x0qcwfjiim03sh5hi9pix61mwdmmq0zc7pg54s3"; depends=[DAPAR DAPARdata data_table DT highcharter htmlwidgets rhandsontable shiny shinyAce shinyjs webshot]; };
+  ProtGenerics = derive2 { name="ProtGenerics"; version="1.10.0"; sha256="16ijp50448wnabp43klx943rhdvh7x45hvy7cnpq1s4dckxhhyni"; depends=[]; };
+  ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.8.0"; sha256="1myd5gqr3nmbp6f1n7ilp6qjcfgm401frm4ldvxbjyppxh6m1wh5"; depends=[AnnotationHub AnnotationHubData Biobase BiocInstaller Biostrings GenomeInfoDb MSnbase mzR RCurl]; };
+  PureCN = derive2 { name="PureCN"; version="1.8.1"; sha256="12wpqwz771vzz5yad67d9j1jhgi5ccxngyqcjcddqwsiws65prwc"; depends=[BiocGenerics Biostrings data_table DNAcopy edgeR futile_logger GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges limma RColorBrewer Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM]; };
+  Pviz = derive2 { name="Pviz"; version="1.12.0"; sha256="1piws8xrq40qk3dkhci01wrcz4nz11rp8j2kf8rxvm9bsf2wxhk5"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; };
+  QDNAseq = derive2 { name="QDNAseq"; version="1.14.0"; sha256="0lgbv4s0xqgrs7q6ynb3c273sf7pyrp51jnc8ravq1z5g0a2zshy"; depends=[Biobase BiocParallel CGHbase CGHcall DNAcopy GenomicRanges IRanges matrixStats R_utils Rsamtools]; };
+  QUALIFIER = derive2 { name="QUALIFIER"; version="1.22.0"; sha256="1lp9b3g1nlfdvd8iaryrs6314fc2rpqcdfvbr92sb114yd0kj6qp"; depends=[Biobase data_table flowCore flowViz flowWorkspace hwriter lattice latticeExtra MASS ncdfFlow reshape XML]; };
+  QUBIC = derive2 { name="QUBIC"; version="1.6.4"; sha256="0sncmd1xrph5hd9y7sj53943cdf6fvhami4l8qd13qr5ikf07v0l"; depends=[biclust Matrix Rcpp RcppArmadillo]; };
+  QuartPAC = derive2 { name="QuartPAC"; version="1.10.0"; sha256="1l7bljgqwsawn1naq62mcvp50fh5mhwc3qxxi7r6dy25v05ji4gr"; depends=[data_table GraphPAC iPAC SpacePAC]; };
+  QuasR = derive2 { name="QuasR"; version="1.18.0"; sha256="0z87i7drfz1ssqwh27w4bhclf2k6i5bhjbfmn646pjb6qb6cvxia"; depends=[Biobase BiocGenerics BiocInstaller BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rsamtools rtracklayer S4Vectors ShortRead zlibbioc]; };
+  QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.6.0"; sha256="15i1lnc0k317ccvk7xdqq4hfqxip49lv0yvlkygf4xwa9g3z1vjl"; depends=[dplyr Rcpp rlist]; };
+  R3CPET = derive2 { name="R3CPET"; version="1.10.0"; sha256="1cfb32rykza8h9v2h75674lhapykm3s6cym0c513mmr69vdbmqva"; depends=[BiocGenerics clues clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; };
+  R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.28.1"; sha256="1vqv4gywwird0a55qw6c9pq67jml4f8pa28zrf04gim1mgalzfyl"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; };
+  R4RNA = derive2 { name="R4RNA"; version="1.6.0"; sha256="0qxzqf8gjmblh9xlra8554fmr59gkpiq6pa8q9xmi5y56pgpzcqv"; depends=[Biostrings]; };
+  RBGL = derive2 { name="RBGL"; version="1.54.0"; sha256="18jad23i3899ypv4bg3l47cvvs3qnj1pqis2p9x0135yv5y6wnv7"; depends=[graph]; };
+  RBM = derive2 { name="RBM"; version="1.10.0"; sha256="1nqmf9yiaam767f2wkwggnw6v0rymszx7chnkis0xbdsllzqb0j4"; depends=[limma marray]; };
+  RBioinf = derive2 { name="RBioinf"; version="1.38.0"; sha256="01qk9ddk8bm9sl70rlwgmrkz2y7dnqzrhi13hhh0ii62s0z0gdwh"; depends=[graph]; };
+  RCAS = derive2 { name="RCAS"; version="1.4.2"; sha256="0d8mm3f0lxdvngldlazql2vcfv3w7172ari0g2lp3cj101d7pyd3"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot data_table DBI DT genomation GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo knitr motifRG org_Hs_eg_db pbapply pheatmap plotly plotrix proxy rmarkdown RSQLite rtracklayer S4Vectors topGO]; };
+  RCASPAR = derive2 { name="RCASPAR"; version="1.24.0"; sha256="1v19pv81q0g965mks88ablznzhcdk3kfd7j2dgxx4r12bl1afawg"; depends=[]; };
+  RCy3 = derive2 { name="RCy3"; version="1.8.0"; sha256="09p66zxh82j5pcjz1zn3cg43rpsp0gnkwja836m6g1i450zrialv"; depends=[graph httr RCurl RJSONIO]; };
+  RCyjs = derive2 { name="RCyjs"; version="1.10.0"; sha256="0vlyh32byw49j3vfw0avknixflpjs5h599xxlbf2zc6irvncg1wg"; depends=[base64enc BiocGenerics BrowserViz graph httpuv igraph jsonlite Rcpp]; };
+  RCytoscape = derive2 { name="RCytoscape"; version="1.27.1"; sha256="1ai82y181bfckq8lqs1vsax2n1jwd5krz3x4b5ys56y3qjdqrgxy"; depends=[BiocGenerics graph]; };
+  RDAVIDWebService = derive2 { name="RDAVIDWebService"; version="1.16.0"; sha256="1fzv1qn7jkz0zcvj2n7ijf7z40pjp9myhxfffpafwrvbrn4qg0wg"; depends=[Category ggplot2 GO_db GOstats graph RBGL rJava]; };
+  RDRToolbox = derive2 { name="RDRToolbox"; version="1.28.0"; sha256="0sm13v95m5b9jr451kbc4bichw6bhxlphxzaavkbvqh8qdv1l83q"; depends=[MASS rgl]; };
+  REDseq = derive2 { name="REDseq"; version="1.24.0"; sha256="1k5d7s67gd4bjp6y6xjjplkjr7kv69iia11npmdwda743agkmyb7"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; };
+  REMP = derive2 { name="REMP"; version="1.2.5"; sha256="1vpx4jzh8yyjpiqw4jr4chhha5dg4p2pwjza4mfbnpkzjbdy9ssr"; depends=[AnnotationHub BiocGenerics BiocParallel Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 caret doParallel foreach GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b2_hg19 impute IRanges iterators kernlab minfi org_Hs_eg_db ranger S4Vectors settings SummarizedExperiment]; };
+  RGSEA = derive2 { name="RGSEA"; version="1.12.0"; sha256="1w63gc0pqgc2ran4a5pd4qxmcj9mx9hxy4has6jbar66pa6q4sfw"; depends=[BiocGenerics]; };
+  RGalaxy = derive2 { name="RGalaxy"; version="1.22.0"; sha256="1cd5my1jzhlijshd4mh5zc7gsv5jic08i1ydmysjh760q97fg99v"; depends=[Biobase BiocGenerics optparse roxygen2 XML]; };
+  RGraph2js = derive2 { name="RGraph2js"; version="1.6.0"; sha256="0shrvxsm452yrd7x36m31fkmwry55jagfvqpd7hzssj0imkg521w"; depends=[digest graph rjson whisker]; };
+  RIPSeeker = derive2 { name="RIPSeeker"; version="1.18.0"; sha256="0bqkzwrncww7il36273chkd3gfxmii7p566ycki9qij419pwr35y"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; };
+  RITAN = derive2 { name="RITAN"; version="1.2.0"; sha256="199kddc19fwkfgqnbhx7v4sl5h6lj6f3wqs5xy9f9n9bg09f5rrf"; depends=[BgeeDB dynamicTreeCut ggplot2 gplots gridExtra gsubfn hash igraph knitr linkcomm MCL plotrix png ProNet RColorBrewer reshape2 RITANdata sqldf STRINGdb]; };
+  RIVER = derive2 { name="RIVER"; version="1.2.0"; sha256="00j9i0hrn0j2i5rxgsax3ixj8pwm2ks9fyvp657yd5amm1vackxq"; depends=[Biobase ggplot2 glmnet pROC]; };
+  RImmPort = derive2 { name="RImmPort"; version="1.6.0"; sha256="1fj69k1mb0gbajsiah23azp0ina3wvc43ghr6866glqcfh4xckj7"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; };
+  RJMCMCNucleosomes = derive2 { name="RJMCMCNucleosomes"; version="1.2.0"; sha256="0xjscfbxrrfnd40dmzhrrly0v3pk1k33jdl4z19bslh89gmrmygr"; depends=[BiocGenerics BiocParallel consensusSeekeR GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; };
+  RLMM = derive2 { name="RLMM"; version="1.40.0"; sha256="01mbk00fbhzldivxlr5jfy1fgfrdbd657lya3s3p7zxw7z0054a0"; depends=[MASS]; };
+  RMassBank = derive2 { name="RMassBank"; version="2.6.0"; sha256="1yfnj64ybl95a7bc4980i5h6cvs2hq3nkmj9dklarcp9wfw5p59w"; depends=[Biobase digest MSnbase mzR rcdk Rcpp RCurl rjson S4Vectors XML yaml]; };
+  RNASeqPower = derive2 { name="RNASeqPower"; version="1.18.0"; sha256="08x58sd6q5xm47ix2f1kkqpgyk10nnbf994i4m1wia8fjhx0hdkm"; depends=[]; };
+  RNAinteract = derive2 { name="RNAinteract"; version="1.26.0"; sha256="1cscf2izpx924ai0vian9mm528mn1k618zqscss7mry13ik78p3c"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; };
+  RNAither = derive2 { name="RNAither"; version="2.26.0"; sha256="1dyxmk0j319822qf0wwd41xw7v9qdahixkhmsbv3qp6203hp49w5"; depends=[biomaRt car geneplotter limma prada RankProd splots topGO]; };
+  RNAprobR = derive2 { name="RNAprobR"; version="1.10.0"; sha256="0lq0cf5g004w2gi8rs29rhdy3p49njmwnw5jhfijfj4hgkgc6caf"; depends=[BiocGenerics Biostrings GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr Rsamtools rtracklayer S4Vectors]; };
+  ROC = derive2 { name="ROC"; version="1.54.0"; sha256="0a60k93q0zsmj2s4gy9wgzpd5yl9xdv2g62m18z4s4dmr3ykwsdv"; depends=[]; };
+  ROTS = derive2 { name="ROTS"; version="1.6.0"; sha256="12dqbwqiiz21im45iqf41nm25anf0fffip86glpydwwc0km054jh"; depends=[Biobase Rcpp]; };
+  ROntoTools = derive2 { name="ROntoTools"; version="2.6.0"; sha256="0lxxqa8syanb9v4nzc93arlwg65zyf4hkgxgw6q4h62mxkabdp0d"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; };
+  RPA = derive2 { name="RPA"; version="1.34.0"; sha256="1s5d8wpy3n69f9lnsi8avwalbzzvi7v8np6bv3vcnxy3nfx0iqx3"; depends=[affy BiocGenerics phyloseq]; };
+  RProtoBufLib = derive2 { name="RProtoBufLib"; version="1.0.1"; sha256="1a8psx12hwbzybkd92k9n3351g24fqqxrmq5x3sln62z2f0c7psw"; depends=[]; };
+  RRHO = derive2 { name="RRHO"; version="1.18.0"; sha256="1nz643k6bahg1bizw5bgjkpv2hd7hpi87s4kh1z38jqfpfixw9lk"; depends=[VennDiagram]; };
+  RSVSim = derive2 { name="RSVSim"; version="1.18.0"; sha256="0f2fv2cxwhsl6gvz3dpgk55faymdwxyry6lr3l6f2s8f6rqpnzgf"; depends=[Biostrings GenomicRanges IRanges ShortRead]; };
+  RTCA = derive2 { name="RTCA"; version="1.30.0"; sha256="0y2vrqfr4qjgsq8f82a5xnfhm835wi5zqf1xlxrv4mpxm9f9jr38"; depends=[Biobase gtools RColorBrewer]; };
+  RTCGA = derive2 { name="RTCGA"; version="1.8.0"; sha256="1x4kms2f7zskxqskzdi9q8adwxyi1w42kn5mj1skhgihdk5ai3b6"; depends=[assertthat data_table dplyr ggplot2 ggthemes knitr purrr rvest scales stringi survival survminer viridis XML xml2]; };
+  RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.8.0"; sha256="0r3j9ky44gfpm1qz95la23j93khd00rcg6nz20dkvrfzsdqkixah"; depends=[Biobase BiocGenerics data_table GenomeInfoDb GenomicRanges httr IRanges limma plyr RaggedExperiment RCircos RCurl RJSONIO S4Vectors SummarizedExperiment survival XML]; };
+  RTN = derive2 { name="RTN"; version="2.2.0"; sha256="0h7dd0zn7fiy22ab65fh47vi5j312r6rc8c43zh4f7c3cx3ls53s"; depends=[car data_table igraph IRanges limma minet RedeR S4Vectors snow]; };
+  RTNduals = derive2 { name="RTNduals"; version="1.2.0"; sha256="055milw62gndj13z0gpzi5f9zjxsnhdg8rvfm5msiyivay2ms7ki"; depends=[RTN]; };
+  RTNsurvival = derive2 { name="RTNsurvival"; version="1.2.0"; sha256="072hv2b6s9k6s8bp23sq3frq8h5wx2kr4jz1j2kyih17psa5kpkb"; depends=[png RColorBrewer RTN RTNduals survival]; };
+  RTopper = derive2 { name="RTopper"; version="1.24.0"; sha256="18ncjfwm1rsxrxz32n5z1a88rn0z8hlrksxlm9ninhl4igas0661"; depends=[Biobase limma multtest]; };
+  RUVSeq = derive2 { name="RUVSeq"; version="1.12.0"; sha256="0hkvj1gb11ci2ywqbqdfydx9pm0wchja2lbwkqjvw2svqmc9clww"; depends=[Biobase EDASeq edgeR MASS]; };
+  RUVcorr = derive2 { name="RUVcorr"; version="1.10.0"; sha256="0nhpz89x4z4dgdxynrxbpdaxbhnxk86ychnmln3vk5b9fp3yj3v2"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; };
+  RUVnormalize = derive2 { name="RUVnormalize"; version="1.12.0"; sha256="071p0wc0y38j2rvbbqzr6i5i2rvmmxdc3yj2fggvlbwbq2k4dfpx"; depends=[Biobase RUVnormalizeData]; };
+  RVS = derive2 { name="RVS"; version="1.0.0"; sha256="1m0w3cp5395sh43b05kc7067wyvmqlq6kiczp0b868392bhaq8hs"; depends=[gRain kinship2 snpStats]; };
+  RaggedExperiment = derive2 { name="RaggedExperiment"; version="1.2.5"; sha256="05zl433y8bagqvf1672zjdwxlp39g2f3qmv12xycrmgz5gs43d53"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors SummarizedExperiment]; };
+  RamiGO = derive2 { name="RamiGO"; version="1.23.0"; sha256="0dmr58masqca38z412lh2kfi1g498ifyz8bwy7kbk6ybjhxvklmv"; depends=[graph gsubfn igraph png RCurl RCytoscape]; };
+  RankProd = derive2 { name="RankProd"; version="3.4.0"; sha256="186aadri7p4fnf76cjgi2r1ic51dicks5alfw4hzx0dzi2hyy606"; depends=[gmp Rmpfr]; };
+  RareVariantVis = derive2 { name="RareVariantVis"; version="2.6.0"; sha256="1c1miqsrvf89dygg8m2axdq995axylhhdyi1gvig368l17vvcgsp"; depends=[BiocGenerics BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores googleVis gtools IRanges phastCons100way_UCSC_hg19 S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; };
+  Rariant = derive2 { name="Rariant"; version="1.14.0"; sha256="1kfw2gfvdgzi5ldarmmwnksgg256vfaripcridlsb2pgwzay52k4"; depends=[dplyr exomeCopy GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges reshape2 Rsamtools S4Vectors shiny SomaticSignatures VariantAnnotation VGAM]; };
+  RbcBook1 = derive2 { name="RbcBook1"; version="1.46.0"; sha256="0qj8zvhq9cq3akdl6zpspvvz9jlvc0lxrn4ap7qd984406jihyg4"; depends=[Biobase graph rpart]; };
+  Rbowtie = derive2 { name="Rbowtie"; version="1.18.0"; sha256="0v3x9i6wmps7x0zpvgimzfwarg4246nbk4cpa1kim46r5jkl5m4v"; depends=[]; };
+  Rbowtie2 = derive2 { name="Rbowtie2"; version="1.0.1"; sha256="1xplrih6sijbwj24k4lb0cml5pmyszmw5jzkaii5m3vign6m7wmh"; depends=[]; };
+  Rcade = derive2 { name="Rcade"; version="1.20.0"; sha256="0awsdg6wfm6hykj96s8cgz2mhn2i4jl1yabg7xfj0nmd776gv5fa"; depends=[baySeq GenomeInfoDb GenomicAlignments GenomicRanges IRanges plotrix rgl Rsamtools S4Vectors]; };
+  Rchemcpp = derive2 { name="Rchemcpp"; version="2.16.0"; sha256="1k5rgk944x0xy0y7l4fba1gfbiq6vnpbgmwwm520vv061v9g72nz"; depends=[ChemmineR Rcpp]; };
+  RchyOptimyx = derive2 { name="RchyOptimyx"; version="2.18.0"; sha256="0lghahggrh3142rn9f2rnh517740d62bh7rc97zd2sjk3rfdb761"; depends=[flowType graph Rgraphviz sfsmisc]; };
+  Rcpi = derive2 { name="Rcpi"; version="1.14.1"; sha256="1g19arw0j0h02mfvlcilhy305ksy25x8y6v4qyvfbbspj9nccn0l"; depends=[Biostrings ChemmineR doParallel fmcsR foreach GOSemSim rcdk RCurl rjson]; };
+  Rdisop = derive2 { name="Rdisop"; version="1.38.0"; sha256="1s77iw418g5fchpjl590cn97yhpcp9rhynwnckiqpyyyd8bg31i4"; depends=[Rcpp RcppClassic]; };
+  ReQON = derive2 { name="ReQON"; version="1.24.0"; sha256="0fsg0y2kxzkcfa6yv79w4swnw3ymjw3rbzw458a39npmavxvl08l"; depends=[rJava Rsamtools seqbias]; };
+  ReactomePA = derive2 { name="ReactomePA"; version="1.22.0"; sha256="0zckjs3w0pvk64g2wf5awc6npd43irv7ac38c5v3jy13lh0p4kc2"; depends=[AnnotationDbi DOSE graphite igraph reactome_db]; };
+  ReadqPCR = derive2 { name="ReadqPCR"; version="1.24.0"; sha256="1aapiyx6qx8bcx6qvr9ljg0nin2dnxlpvsm3n935d2riq94ah492"; depends=[affy Biobase]; };
+  RedeR = derive2 { name="RedeR"; version="1.26.0"; sha256="03gf09mawc8ps8bx32vh2xgwqhha6gb9cm9yz1g78650mj7sanxc"; depends=[igraph]; };
+  RefNet = derive2 { name="RefNet"; version="1.14.0"; sha256="1ssqj0jym17pawi3vh4y38fqj1sv59sq1sb4dsvlhkcf7c8lp33d"; depends=[AnnotationHub BiocGenerics IRanges PSICQUIC RCurl shiny]; };
+  RefPlus = derive2 { name="RefPlus"; version="1.48.0"; sha256="0px6s5r72s1yscvy2k7fkgliy86z1wq7q8yfc0yjj8kj9qyi0wmy"; depends=[affy affyPLM Biobase preprocessCore]; };
+  Repitools = derive2 { name="Repitools"; version="1.24.0"; sha256="1aynhawn0fssm0haqqm7y22q8sky7an5gdnixalr7yykrnyy9wia"; depends=[aroma_affymetrix BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Ringo Rsamtools Rsolnp rtracklayer S4Vectors]; };
+  ReportingTools = derive2 { name="ReportingTools"; version="2.17.3"; sha256="0r0dp3s87q2706rqck2120bmq9nnmbfkxf8yyrm2i4zvkpay18yd"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; };
+  Rgraphviz = derive2 { name="Rgraphviz"; version="2.22.0"; sha256="1y9nyjffa9644jch0p2i3w302fmnyc2kb0c3z1f3d5zp1p4qmyqv"; depends=[graph]; };
+  Rhdf5lib = derive2 { name="Rhdf5lib"; version="1.0.0"; sha256="0kkc4rprjbqn2wvbx4d49kk9l91vihccxbl4843qr1wqk6v33r1w"; depends=[]; };
+  Rhtslib = derive2 { name="Rhtslib"; version="1.10.0"; sha256="1dw3p44bfr0m7w39ckc2k37sjcp1zz0b9g12mr8am15jaj6v0q2j"; depends=[zlibbioc]; };
+  RiboProfiling = derive2 { name="RiboProfiling"; version="1.7.2"; sha256="0yygf098phiakaj8c74c337gbwpd0dh4haabbg2qq1k0qjw4prmp"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; };
+  Ringo = derive2 { name="Ringo"; version="1.42.0"; sha256="174zcz86x43yrg9wl1wwdhammgyxhfc3aqas3yqgrdq7vdsnxzxq"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; };
+  Risa = derive2 { name="Risa"; version="1.20.0"; sha256="10ypbd9qwh1rk27fwm8naf3gl05w9zlw79qyr55pk5m6x5lnn9cb"; depends=[affy Biobase biocViews Rcpp xcms]; };
+  Rmagpie = derive2 { name="Rmagpie"; version="1.34.0"; sha256="1hvv8pps0q7xnsl33rammqvyj191j5gs78r2333jgscxnw4byqb7"; depends=[Biobase e1071 kernlab pamr]; };
+  RmiR = derive2 { name="RmiR"; version="1.34.0"; sha256="10n8i7qirbd8xrb73ccxyj7c6bi1szx263nwjh8w2j9x4dgzx22x"; depends=[DBI RmiR_Hs_miRNA RSVGTipsDevice]; };
+  RnBeads = derive2 { name="RnBeads"; version="1.10.7"; sha256="1rlxa161sgbz7p59svihk2ym70d1c5yi02rcajgp0fraf8ln8xhc"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr S4Vectors]; };
+  RnaSeqGeneEdgeRQL = derive2 { name="RnaSeqGeneEdgeRQL"; version="1.1.0"; sha256="06i2fy89wck0jhpc174d81ka7jim8gjamjk0ym1j0fh3ldiw9yvm"; depends=[edgeR GO_db gplots org_Mm_eg_db]; };
+  RnaSeqSampleSize = derive2 { name="RnaSeqSampleSize"; version="1.10.0"; sha256="1r0bn121bf5fcp4im4hm2c6rccgf7fb1vvxj2iri8ippc2k60d2c"; depends=[biomaRt edgeR heatmap3 KEGGREST matlab Rcpp RnaSeqSampleSizeData]; };
+  Rnits = derive2 { name="Rnits"; version="1.12.0"; sha256="00ddzbjms9wpiinc021s4b50wbzdafnml96ngsmi7rd8ipr3k3vp"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; };
+  Roleswitch = derive2 { name="Roleswitch"; version="1.16.0"; sha256="1jp55lkfwwx08rbdkp5324ziwn5b3pzrcidk18zpplgwn4c6jsk9"; depends=[Biobase biomaRt Biostrings DBI microRNA plotrix pracma reshape]; };
+  RpsiXML = derive2 { name="RpsiXML"; version="2.20.0"; sha256="0svh7fdl957q47jqc5q8sysvghs5anhj61r3zcapikbbi19x8j4i"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; };
+  Rqc = derive2 { name="Rqc"; version="1.12.0"; sha256="11l72jympxbb156llifc5qa1zx34774b0waqq3nyv351bqm2l5c8"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase digest GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; };
+  Rsamtools = derive2 { name="Rsamtools"; version="1.30.0"; sha256="0pjny5fjvbnfdyhl3bwxin678sha2drvs00sivxh3l772cn6yams"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges S4Vectors XVector zlibbioc]; };
+  Rsubread = derive2 { name="Rsubread"; version="1.28.1"; sha256="1fvk88jmvx987hifj3j6lrvwpma66vqmvszphgsfvy6nq4j2wnr0"; depends=[]; };
+  Rtreemix = derive2 { name="Rtreemix"; version="1.40.0"; sha256="1h7frl1zgkzvrfjzdc6l2xybhp68pizdi7vix012m3imfs97sj25"; depends=[Biobase graph Hmisc]; };
+  S4Vectors = derive2 { name="S4Vectors"; version="0.16.0"; sha256="03s8vz33nl6mivjb7dbvj702dkypi340lji1sjban03fyyls0hw0"; depends=[BiocGenerics]; };
+  SAGx = derive2 { name="SAGx"; version="1.52.0"; sha256="1fjyhs3isbzp4fk460gk4xfqs62ha9vra8blzbkng3r86axarlgd"; depends=[Biobase multtest]; };
+  SANTA = derive2 { name="SANTA"; version="2.16.0"; sha256="12l03j2vh74n8lbvdr436qylaxhj3ysqg0m7crl9l30kpzg4agcv"; depends=[igraph Matrix snow]; };
+  SBMLR = derive2 { name="SBMLR"; version="1.74.0"; sha256="0l2c0irfk50kiz22w8gzzsanh3dv5bpqrzfy1ba6bw5ghs066j65"; depends=[deSolve XML]; };
+  SC3 = derive2 { name="SC3"; version="1.7.7"; sha256="1x9x450qnaw94px9b861zyxyyfxxbclw1bq765adfixgrlakyw1w"; depends=[BiocGenerics cluster doParallel doRNG e1071 foreach ggplot2 pheatmap Rcpp RcppArmadillo robustbase ROCR rrcov S4Vectors shiny SingleCellExperiment SummarizedExperiment WriteXLS]; };
+  SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.20.0"; sha256="1fgkrr6303b0hn9rdkry3rd7yskqanmxy74akxgk4nkjwf817rra"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; };
+  SCnorm = derive2 { name="SCnorm"; version="1.0.0"; sha256="0vpwca5gbhdm1g1xsb9451z2cvqr9c85z79whq011d52adz5fmr6"; depends=[BiocParallel cluster data_table forcats ggplot2 moments quantreg S4Vectors SummarizedExperiment]; };
+  SELEX = derive2 { name="SELEX"; version="1.10.0"; sha256="0f81sa0azbh7n7vg39865pv923k2sza7md713g5fkn78vrx5q645"; depends=[Biostrings rJava]; };
+  SEPA = derive2 { name="SEPA"; version="1.8.0"; sha256="0g0gqwgsn8bp9mz40dbqb4f785mhwcmb5y4jsgj16i5pv0ll59a7"; depends=[ggplot2 org_Hs_eg_db org_Mm_eg_db reshape2 segmented shiny topGO]; };
+  SGSeq = derive2 { name="SGSeq"; version="1.12.0"; sha256="0wbwyr4nckjkafc1h80a0isz27lyg87r42ym4zs6nmpj0p3xv94q"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; };
+  SICtools = derive2 { name="SICtools"; version="1.8.0"; sha256="0n3m3435wa95mld4b57hr31rfhlk41yw1qqi1jdnybkqgdndpqf8"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; };
+  SIM = derive2 { name="SIM"; version="1.48.0"; sha256="1n207w5idd2v515v8ppsfx7q1wvn2zxy6if7dp2hpr0x2qvxijnf"; depends=[globaltest quantreg quantsmooth]; };
+  SIMAT = derive2 { name="SIMAT"; version="1.10.0"; sha256="0gd99p8kjf1wn0xygdyppxgddp9bnp3a3grg8za2mmm8xv5r990h"; depends=[ggplot2 mzR Rcpp reshape2]; };
+  SIMLR = derive2 { name="SIMLR"; version="1.4.0"; sha256="1sfd32qd39wy8a1206xkazbmvkqwhs09p7fhdn8n59xf56914pfa"; depends=[Matrix pracma Rcpp RcppAnnoy RSpectra]; };
+  SISPA = derive2 { name="SISPA"; version="1.8.0"; sha256="18v8fw3l4pxh4fi18fhnqxbd1hlhp2w36s31vf58ffldq3bz1bpb"; depends=[changepoint data_table genefilter ggplot2 GSVA plyr]; };
+  SLGI = derive2 { name="SLGI"; version="1.38.0"; sha256="1p0lwzmzz820npnsw9sk6x12innc39qv0ja0di7rplkmsi60z92j"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice ScISI]; };
+  SLqPCR = derive2 { name="SLqPCR"; version="1.44.0"; sha256="16kvssib1j4d5cn3b350ip2m9m7fcsgm1mgq13wbfnwcd6sx52kb"; depends=[]; };
+  SMAP = derive2 { name="SMAP"; version="1.42.0"; sha256="0n2f1qib0k9rxdizmrazxp2wnf6ycaz90b0vzszvakawc9np36dq"; depends=[]; };
+  SMITE = derive2 { name="SMITE"; version="1.6.0"; sha256="1s5gsgf878996hvd15gbjas7lyxlsw7s4xxcpcmgnlzq1dxyq0ma"; depends=[AnnotationDbi Biobase BioNet geneLenDataBase GenomicRanges ggplot2 goseq Hmisc igraph IRanges KEGG_db org_Hs_eg_db plyr reactome_db S4Vectors scales]; };
+  SNAGEE = derive2 { name="SNAGEE"; version="1.18.0"; sha256="0315x8dl21i9zysp55nmjikha9fxykw8lzba4bk7gf0bc0947i26"; depends=[SNAGEEdata]; };
+  SNPRelate = derive2 { name="SNPRelate"; version="1.12.2"; sha256="05x0jjybzkyvjc9sq590hg2lc6fjxqmnlvgvwc0d7pyri5pa4rki"; depends=[gdsfmt]; };
+  SNPchip = derive2 { name="SNPchip"; version="2.24.0"; sha256="1z0708rqn9h9ajmdqv44y2yl0gqqg9gy1h5yj3wzjpj4dgy5d4l0"; depends=[Biobase foreach GenomeInfoDb GenomicRanges IRanges lattice oligoClasses S4Vectors SummarizedExperiment]; };
+  SNPediaR = derive2 { name="SNPediaR"; version="1.4.1"; sha256="083i242x2a133wgpbi6plw7hs426b4qsgl7792akr0fm965mnna5"; depends=[jsonlite RCurl]; };
+  SNPhood = derive2 { name="SNPhood"; version="1.8.0"; sha256="082fwmzdjwgn2x33isi81a05l557367ham162li3q76g2jfcmh7r"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; };
+  SPEM = derive2 { name="SPEM"; version="1.18.0"; sha256="05gpj1fykiw8xjcbd6splqkb8jsyksnhzl6g6pzinpbczhslq55a"; depends=[Biobase Rsolnp]; };
+  SPIA = derive2 { name="SPIA"; version="2.30.0"; sha256="0m2vv6zj0vgd98w2jrlbwbyn998ml2i2wr9160gmq5h77rn91xq3"; depends=[KEGGgraph]; };
+  SPLINTER = derive2 { name="SPLINTER"; version="1.4.0"; sha256="06xamivcwlpwj6n8c3wzgd5ykh21q2mrdl7zz1bnicq5npha99l9"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz IRanges plyr S4Vectors seqLogo]; };
+  SPONGE = derive2 { name="SPONGE"; version="1.0.2"; sha256="100gbcysmf3fhn22zmvvx2sck6hhfgc7ar782l822vbsig1vnyk9"; depends=[bigmemory Biobase data_table doRNG expm foreach glmnet gRbase igraph iterators logging MASS ppcor]; };
+  SQUADD = derive2 { name="SQUADD"; version="1.28.0"; sha256="1z139p0xbaq4gvd9acxnd8dlapdsiaab1fj10pc7wx2iz4dj9zd6"; depends=[RColorBrewer]; };
+  SRAdb = derive2 { name="SRAdb"; version="1.40.0"; sha256="18aayqid2fhhkjf7anlk34qw3fj3byxsxcrw2lmq4s4mqq06k5vh"; depends=[GEOquery graph RCurl RSQLite]; };
+  SRGnet = derive2 { name="SRGnet"; version="1.4.0"; sha256="1a2as38svd6vp6pdllir4gs6jqicg7n7ya42ffjgiy2rpnyijbci"; depends=[DMwR EBcoexpress gbm Hmisc igraph limma MASS matrixStats pvclust]; };
+  SSPA = derive2 { name="SSPA"; version="2.18.0"; sha256="0dq4j299yjg5wq40f3qdm8hi0vv6zg1d04hml1rw25s1ws2pngyj"; depends=[lattice limma qvalue]; };
+  STAN = derive2 { name="STAN"; version="2.6.0"; sha256="09aal6p3sdbvcp6dkrj533x3m1qxxrkgsk35j9idz643vv133xjp"; depends=[BiocGenerics GenomeInfoDb GenomicRanges Gviz IRanges poilog Rsolnp S4Vectors]; };
+  STATegRa = derive2 { name="STATegRa"; version="1.12.0"; sha256="08k2chi5cgpj2xxi16jzc3prsp3qpwwq0f4wrqzd9rwj6f9afwk5"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; };
+  STRINGdb = derive2 { name="STRINGdb"; version="1.18.0"; sha256="0hrhjx4cpl2zp2chgyw0ayadsv8g1nnarn7gyxni76ci4wayh7bf"; depends=[gplots hash igraph plotrix plyr png RColorBrewer RCurl sqldf]; };
+  STROMA4 = derive2 { name="STROMA4"; version="1.2.0"; sha256="06g2p52mgc3f9hzyqcjbcfvk28fx6ynf3c9gbwvchibjaiqdy1sh"; depends=[Biobase BiocParallel cluster matrixStats]; };
+  SVAPLSseq = derive2 { name="SVAPLSseq"; version="1.4.0"; sha256="190r34lir810hla9wp3pwl3w2yvw5x532988vyvjzl49wdhq535n"; depends=[edgeR ggplot2 limma lmtest pls SummarizedExperiment]; };
+  SVM2CRM = derive2 { name="SVM2CRM"; version="1.10.0"; sha256="0v4qgs4bmi44i36pm5y7bdkjiwj853738j8f7rxzqnp3y8nbbwjn"; depends=[AnnotationDbi GenomicRanges IRanges LiblineaR mclust pls ROCR rtracklayer squash SVM2CRMdata verification zoo]; };
+  SWATH2stats = derive2 { name="SWATH2stats"; version="1.8.1"; sha256="1hd4gxb2p81v2d9x4zw0asfm7r9s0wq2flnpl9g7r9fxm2yfi339"; depends=[data_table ggplot2 reshape2]; };
+  SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.32.0"; sha256="0n1pjpgdsisq4zv9dny3bfzjz3ga1cibh2gmm5irplfxgpcdlnqa"; depends=[]; };
+  ScISI = derive2 { name="ScISI"; version="1.50.0"; sha256="0ssyx32bcaz40yr9iraczk9p53ymia4m8nfsmzxzr804fyz8hnvw"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; };
+  Scale4C = derive2 { name="Scale4C"; version="1.0.0"; sha256="035fyjswn23s6az36j5b94b1aj31n6yb5w243bqqwvqrl2kqhkdv"; depends=[GenomicRanges IRanges smoothie SummarizedExperiment]; };
+  SemDist = derive2 { name="SemDist"; version="1.12.0"; sha256="1h3ld34h61sx228ix68sg86y3w9mzh3iq1gdri0lbixvhzx9w25b"; depends=[annotate AnnotationDbi GO_db]; };
+  SeqArray = derive2 { name="SeqArray"; version="1.18.2"; sha256="05w051i63af4akr6zna9w14bdyi06bpif0vab9yvf6iwq2ag72kz"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
+  SeqGSEA = derive2 { name="SeqGSEA"; version="1.18.0"; sha256="1vaqa6jkvwxpbqnz9wz3i6p26mky6d7d704cjv5as67j04v99b2a"; depends=[Biobase biomaRt DESeq doParallel]; };
+  SeqSQC = derive2 { name="SeqSQC"; version="1.0.0"; sha256="0qj1y9zsjxkh08jkw80hl62072viincq1pvcz9r3i0m28nhk7pg5"; depends=[e1071 ExperimentHub gdsfmt GenomicRanges GGally ggplot2 IRanges rbokeh RColorBrewer reshape2 rmarkdown S4Vectors SNPRelate]; };
+  SeqVarTools = derive2 { name="SeqVarTools"; version="1.16.0"; sha256="14n70xzj91f4rshl0kx549rqzy9rrv5mv0b0xvj891i8anxahb2n"; depends=[Biobase dplyr gdsfmt GenomicRanges GWASExactHW IRanges logistf S4Vectors SeqArray tidyr]; };
+  ShortRead = derive2 { name="ShortRead"; version="1.36.0"; sha256="06mknlsmd4hnaxzdjapgvp2kgdnf9w103y500dsac5jgsz4vwzcz"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rsamtools S4Vectors XVector zlibbioc]; };
+  SigCheck = derive2 { name="SigCheck"; version="2.10.0"; sha256="1k2xmb7jcjbdxafr8fspf9pbc0jwcll914lqc42gvhhjq6rnf8q4"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; };
+  SigFuge = derive2 { name="SigFuge"; version="1.16.0"; sha256="0ddy6bayb05gsgh06p5awhjwyx57z0l8fb5x6p0dci2fgzy6gr4f"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; };
+  SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.16.0"; sha256="0jkd78wl5ksm05qjmsx7s8aznh3kfpi34yvxaxv763pqjqzkxa82"; depends=[Biobase limma mclust Ringo]; };
+  SingleCellExperiment = derive2 { name="SingleCellExperiment"; version="1.0.0"; sha256="1r276i97w64a5vdlg6952gkj7bls909p42zl8fn8yz87cdwyaars"; depends=[BiocGenerics S4Vectors SummarizedExperiment]; };
+  SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.14.0"; sha256="107ykkkfy4xpvaflqpsbxkbw5514pxkicffpr24p3x5lj5zp6b8h"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; };
+  SpacePAC = derive2 { name="SpacePAC"; version="1.16.0"; sha256="1dc8z66kzn6lxrc2xz3kyl7fjxy0i0gvjgxc9w3fqvdhkxqp7k6n"; depends=[iPAC]; };
+  SpeCond = derive2 { name="SpeCond"; version="1.32.0"; sha256="1k54zxj224fshnx76hsjxkwaj9vb6387ssgpr0v3zgnf7p4zf4sx"; depends=[Biobase fields hwriter mclust RColorBrewer]; };
+  SpidermiR = derive2 { name="SpidermiR"; version="1.8.2"; sha256="144rfrp55cbcqjnlv93mannfvk33wrxw2sxf5yabs75y2hvi63ri"; depends=[AnnotationDbi gdata ggplot2 gplots gridExtra httr igraph lattice latticeExtra miRNAtap miRNAtap_db networkD3 org_Hs_eg_db TCGAbiolinks visNetwork]; };
+  SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.18.0"; sha256="1pvi2vc5jca4mpangyfllbh5h16015kmcdrwhs32a25wp0fpqhq3"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; };
+  StarBioTrek = derive2 { name="StarBioTrek"; version="1.4.0"; sha256="137y50vxz2jd8lmb7zx3f25by0imzvarimrpfxg7v6marcgpd3nj"; depends=[AnnotationDbi e1071 igraph KEGGREST org_Hs_eg_db ROCR SpidermiR]; };
+  Starr = derive2 { name="Starr"; version="1.34.0"; sha256="0wqcp98v2isy2bnq3qyf5v5lzy19kap2i6qbi9d5mlaxqjrq5afq"; depends=[affxparser affy MASS pspline Ringo zlibbioc]; };
+  Streamer = derive2 { name="Streamer"; version="1.24.0"; sha256="1bmjvg2lb9qmh0fffgkw4wpmjv5rg9iwqhmxz30ciiw8vw6xcklq"; depends=[BiocGenerics graph RBGL]; };
+  SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.8.1"; sha256="19vlwnby83fqjrilsxvnvgz0gvby7mrxvlmx18nb3p1w591ddfjh"; depends=[Biobase BiocGenerics DelayedArray GenomeInfoDb GenomicRanges IRanges Matrix S4Vectors]; };
+  Sushi = derive2 { name="Sushi"; version="1.16.0"; sha256="0axaqm480z8d0b2ldgxwm0swava1p4irc62bpl17p2k8k78g687g"; depends=[biomaRt zoo]; };
+  SwathXtend = derive2 { name="SwathXtend"; version="2.0.0"; sha256="1v8mil305503cpspwk9zln3csv2f1h72afjdddpzks9didq5i3xf"; depends=[e1071 lattice openxlsx VennDiagram]; };
+  SwimR = derive2 { name="SwimR"; version="1.16.0"; sha256="033hh3bpkn6qladvn7iz0fvrbphffzy1rkvmi0j32v9n9h88lizz"; depends=[gplots heatmap_plus R2HTML signal]; };
+  TCC = derive2 { name="TCC"; version="1.18.0"; sha256="10nmha786k85jr93vbnlsxkrr2wiykxa5rl2z5ry49w14fis82m5"; depends=[baySeq DESeq DESeq2 edgeR ROC samr]; };
+  TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.6.12"; sha256="0pih8jpzffsjlhamfpvgcapa48dq2m86f4hxqr5m5z4vgjd7j1mv"; depends=[biomaRt circlize ComplexHeatmap ConsensusClusterPlus data_table doParallel downloader dplyr EDASeq edgeR genefilter GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel ggthemes gridExtra httr IRanges jsonlite knitr limma matlab plyr R_utils RColorBrewer readr rvest S4Vectors scales selectr stringr SummarizedExperiment survival survminer sva tibble XML xml2]; };
+  TCGAbiolinksGUI = derive2 { name="TCGAbiolinksGUI"; version="1.4.2"; sha256="1g81w346lvws8bcm8w94b1r3jjr1zfg5ln80p0rq69gzv9hkdjyw"; depends=[clusterProfiler colourpicker data_table downloader DT ELMER ggplot2 ggrepel maftools pathview plotly readr shiny shinyBS shinydashboard shinyFiles shinyjs stringr SummarizedExperiment TCGAbiolinks]; };
+  TCseq = derive2 { name="TCseq"; version="1.2.0"; sha256="07wbp4caw18g1mf5h40i1c1y7jadfqmx3p7a8zz5rjjibsfa2bw1"; depends=[BiocGenerics cluster e1071 edgeR GenomicAlignments GenomicRanges ggplot2 IRanges locfit reshape2 Rsamtools SummarizedExperiment]; };
+  TDARACNE = derive2 { name="TDARACNE"; version="1.28.0"; sha256="0agzpgz39ya46kgnz95ff2h0hml2mb14fb3pdj218adas24zq9jf"; depends=[Biobase GenKern Rgraphviz]; };
+  TEQC = derive2 { name="TEQC"; version="3.18.0"; sha256="0rnqlk677hcf2w3whc9gdqm21gjqf4rsanaw8a847jc7li8isnpj"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; };
+  TFARM = derive2 { name="TFARM"; version="1.0.0"; sha256="050hpw7xaw7di6m9lgb1ac6cnp3lcv4f9l9d9r3rm1i42q51l8gs"; depends=[arules fields GenomicRanges stringr]; };
+  TFBSTools = derive2 { name="TFBSTools"; version="1.16.0"; sha256="0sivvbqmw5psciyzm5dyyjq9bpcvnhxz8kxis3zgkm9mmjgx84hy"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DBI DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; };
+  TFHAZ = derive2 { name="TFHAZ"; version="1.0.0"; sha256="0kxri2yv12pc9hq55i7qcjlk64p7w0i9kgbf2im2rzlbdb8xc3cm"; depends=[GenomicRanges IRanges S4Vectors]; };
+  TIN = derive2 { name="TIN"; version="1.10.0"; sha256="16lv7k4js3zbak0b1m2mlimd1f56gif3vlm2hpc5vx1y315mz9gd"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; };
+  TMixClust = derive2 { name="TMixClust"; version="1.0.1"; sha256="1mv9hv5hjg55mwbp824n5b74w8zcb9sv8a1wa6hxmfb00n6wcr4h"; depends=[Biobase BiocParallel cluster flexclust gss mvtnorm SPEM zoo]; };
+  TPP = derive2 { name="TPP"; version="3.6.0"; sha256="1gma7lfnq1ybcqnl9536wv22advjaqxmysfgamrgn38zwbcwhdi9"; depends=[Biobase biobroom broom data_table doParallel dplyr foreach futile_logger ggplot2 gridExtra knitr limma magrittr MASS mefa nls2 openxlsx plyr purrr RColorBrewer RCurl reshape2 rmarkdown sme stringr tidyr VennDiagram VGAM]; };
+  TRONCO = derive2 { name="TRONCO"; version="2.10.0"; sha256="1lvzfx75z50r8kd3yrcjwzvsg16yi5644rz90bm1l6hpkmw2wcpf"; depends=[bnlearn cgdsr circlize doParallel foreach gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; };
+  TReNA = derive2 { name="TReNA"; version="0.99.10"; sha256="1yiq953w6830v1fba4gglnf485m6lis11qlpp9g1jw0x4s0rpg70"; depends=[DBI doParallel flare foreach GenomicRanges glmnet lassopv randomForest RPostgreSQL RSQLite vbsr]; };
+  TSCAN = derive2 { name="TSCAN"; version="1.16.0"; sha256="0m88r5yg46ra8k6ymzfrk68fqbg2y47kshzgj5flblbay079hnxg"; depends=[combinat fastICA ggplot2 gplots igraph mclust mgcv plyr shiny]; };
+  TSRchitect = derive2 { name="TSRchitect"; version="1.4.0"; sha256="0qymyjmzpi1n5fpyzw8riz32kwsc2bi1cw3sx9sxvpvhjk45dmyx"; depends=[AnnotationHub BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; };
+  TSSi = derive2 { name="TSSi"; version="1.24.0"; sha256="03i7nnqnbhjpyx8z8gpwysrgi9ln89pgdqaisyk0cmxrsnpp9wxa"; depends=[Biobase BiocGenerics Hmisc IRanges minqa plyr S4Vectors]; };
+  TVTB = derive2 { name="TVTB"; version="1.4.0"; sha256="1p167jjcmsfh2y1wlc5r9j7i4cpdq3kjjnykcq4if737d3xyw15b"; depends=[AnnotationFilter BiocGenerics BiocParallel Biostrings ensembldb ensemblVEP GenomeInfoDb GenomicRanges GGally ggplot2 Gviz IRanges limma reshape2 Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; };
+  TarSeqQC = derive2 { name="TarSeqQC"; version="1.8.0"; sha256="0xpsjl470sa0kvmi3yz25fx9j657d19cbspxxy9vhpr60wyfahpp"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 Hmisc IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; };
+  TargetScore = derive2 { name="TargetScore"; version="1.16.0"; sha256="1davh5chqz8y94ddpzmnjh79m5678yxjk120bfl7857y888ywhc7"; depends=[Matrix pracma]; };
+  TargetSearch = derive2 { name="TargetSearch"; version="1.34.0"; sha256="03ndkhwzgbr005v6m6wppylcg862nnfb69fgmjm9nfxrp70vviy6"; depends=[ncdf4]; };
+  TitanCNA = derive2 { name="TitanCNA"; version="1.16.0"; sha256="00xf005mndqx79y8w6c10p02xyshjv0cmd3wxib73d2s1ns482s6"; depends=[data_table dplyr foreach GenomeInfoDb GenomicRanges IRanges Rsamtools VariantAnnotation]; };
+  TnT = derive2 { name="TnT"; version="1.0.1"; sha256="110h66824anbgsbw3cp74yzlka1v8wmkz6fhgs3n51iz6qikk6f9"; depends=[Biobase data_table GenomeInfoDb GenomicRanges htmlwidgets IRanges jsonlite knitr S4Vectors]; };
+  ToPASeq = derive2 { name="ToPASeq"; version="1.11.0"; sha256="1qbx2n8zlmb5gvmy8r91hxli268vbvd4a5blzl2jwa1v3fb09rim"; depends=[AnnotationDbi Biobase clipper DESeq DESeq2 doParallel edgeR fields graph graphite gRbase KEGGgraph limma locfit qpgraph R_utils RBGL Rcpp Rgraphviz SummarizedExperiment TeachingDemos]; };
+  TransView = derive2 { name="TransView"; version="1.22.0"; sha256="1306l12khnd5xnaimf4rk85nylik4im95f1m56p44rpmhgs33gq6"; depends=[BiocGenerics GenomicRanges gplots IRanges Rsamtools S4Vectors zlibbioc]; };
+  TurboNorm = derive2 { name="TurboNorm"; version="1.26.0"; sha256="0ayn3my5n78y91sj8z92vxj8s7i8jlhh9nbwqf4b541p5xvbc2sd"; depends=[affy convert lattice limma marray]; };
+  TypeInfo = derive2 { name="TypeInfo"; version="1.44.0"; sha256="05q3h91vhbmp9irvsc1mgwkilzqz87wc6cbk78kk979s225fsqis"; depends=[]; };
+  UNDO = derive2 { name="UNDO"; version="1.20.0"; sha256="0i0xdc74mmarr57fk15c4iyq9pm2zgic8ini0ldbk1hx5ci3if6x"; depends=[Biobase BiocGenerics boot MASS nnls]; };
+  UniProt_ws = derive2 { name="UniProt.ws"; version="2.18.0"; sha256="071qmc0jy58wabxwqrv6w4rlg42xj5rzb12ji56a5pdsh1j2nrfw"; depends=[AnnotationDbi BiocGenerics RCurl RSQLite]; };
+  Uniquorn = derive2 { name="Uniquorn"; version="1.6.0"; sha256="05cy9yfw4qb5drxjmisahcca729vdqb6l9qfmrar897bwm2kwb7h"; depends=[BiocParallel DBI R_utils RSQLite stringr WriteXLS]; };
+  VanillaICE = derive2 { name="VanillaICE"; version="1.40.0"; sha256="14swl2fvi56583zmqsfwd5kxvzdn2xm9rf1b0x0r7nn62hkzdmp2"; depends=[Biobase BiocGenerics BSgenome_Hsapiens_UCSC_hg18 crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment]; };
+  VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.24.5"; sha256="07ywn3c4w83l3sr76d0z3b1nv9icgdh3phsjlc6cfx7i6nfmvxw2"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; };
+  VariantFiltering = derive2 { name="VariantFiltering"; version="1.14.0"; sha256="1w959g9iyqiijzr8w3xf4i1pb2jjasyvzwrvyhjymn3xgj7hqiab"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores graph Gviz IRanges RBGL Rsamtools S4Vectors shiny SummarizedExperiment VariantAnnotation XVector]; };
+  VariantTools = derive2 { name="VariantTools"; version="1.20.0"; sha256="1ma1qs9n606a5gjcm8l9fna8vfg5f8ixdzriwaalhys22pyjgqsy"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; };
+  Vega = derive2 { name="Vega"; version="1.26.0"; sha256="1kya7h7xa47d7l3svkpnkwjg49izpjfird5fjja6490ynr1a55yd"; depends=[]; };
+  VegaMC = derive2 { name="VegaMC"; version="3.16.0"; sha256="1lmgmaf4andfxv2z4h2pahyggnic5wj61llzkm8q4k0q7i50l63i"; depends=[Biobase biomaRt genoset]; };
+  XBSeq = derive2 { name="XBSeq"; version="1.8.0"; sha256="07123c1wd3l7lj29kaa0d83dlv7zsrx8gk8aag7g0h8k9vlhcni4"; depends=[Biobase DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma roar]; };
+  XDE = derive2 { name="XDE"; version="2.24.0"; sha256="11g74znfafp03q710mhmzgxap6f7j04b75jhm7x6lmd6cbwqh25p"; depends=[Biobase BiocGenerics genefilter GeneMeta gtools MergeMaid mvtnorm RColorBrewer siggenes]; };
+  XVector = derive2 { name="XVector"; version="0.18.0"; sha256="1i4i3kdxr78lr1kcxq657p11ybi7kq10c8kyaqyh6gfc8i9rhvmk"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; };
+  YAPSA = derive2 { name="YAPSA"; version="1.4.0"; sha256="0jv940xdqrbb8hw13nm6cky767zn9k8wh6sh5vz5b7hgh7c75kww"; depends=[circlize ComplexHeatmap corrplot dendextend GenomeInfoDb GenomicRanges GetoptLong ggplot2 gridExtra gtrellis KEGGREST lsei PMCMR reshape2 SomaticSignatures VariantAnnotation]; };
+  a4 = derive2 { name="a4"; version="1.26.0"; sha256="1fvnpk4bqvglqq04mykk7k57f52phmv8b77mn33hd0lli0ym9a90"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; };
+  a4Base = derive2 { name="a4Base"; version="1.26.0"; sha256="0kj0svm9c7cbrdwm1wqj76jg9vkq34jqqq2b249ss44d17y1cr2s"; depends=[a4Core a4Preproc annaffy AnnotationDbi Biobase genefilter glmnet gplots limma mpm multtest]; };
+  a4Classif = derive2 { name="a4Classif"; version="1.26.0"; sha256="1i14390103kzafbk5ark9n7svw78jm1pkcv4dwwz8q3ibywanyyz"; depends=[a4Core a4Preproc glmnet MLInterfaces pamr ROCR varSelRF]; };
+  a4Core = derive2 { name="a4Core"; version="1.26.0"; sha256="1sbg7aaprmkw381y2b3mjw7fsl0p8xy3gciwfysc4f2fxmxcq51y"; depends=[Biobase glmnet]; };
+  a4Preproc = derive2 { name="a4Preproc"; version="1.26.0"; sha256="058fjw1l82gmk50kjxsy98zxc22fy1k9cj7bk45dxf5ahzpklg0b"; depends=[AnnotationDbi]; };
+  a4Reporting = derive2 { name="a4Reporting"; version="1.26.0"; sha256="1v21sqib2rmrgw2ij4vcb4hbiqybbn7b40x65594xygkridaw4vv"; depends=[annaffy xtable]; };
+  aCGH = derive2 { name="aCGH"; version="1.56.0"; sha256="0878jpirklqlpl90qwcf6cj3jdiadcywk0ilhbiqcmdxlsf0w549"; depends=[Biobase cluster multtest survival]; };
+  acde = derive2 { name="acde"; version="1.8.0"; sha256="0hfby7fdvvj0ip2r27z4c0i6ap18nh08c7gas8vrrrqbznprsqjg"; depends=[boot]; };
+  adSplit = derive2 { name="adSplit"; version="1.48.0"; sha256="13bvql5kd6dz5gpwjyp1b91n8xr4kc9b3sy1m1g184452ccin5na"; depends=[AnnotationDbi Biobase cluster GO_db KEGG_db multtest]; };
+  affxparser = derive2 { name="affxparser"; version="1.50.0"; sha256="1nyzr5277np3dqig4fpnhx6xqsswsrp7rmb6ll6gram47k9l2hf9"; depends=[]; };
+  affy = derive2 { name="affy"; version="1.56.0"; sha256="0jmbkimma5ffsdkk3xp03g4lpz84gd95nkqakif2nqq6wmx0syrj"; depends=[affyio Biobase BiocGenerics BiocInstaller preprocessCore zlibbioc]; };
+  affyContam = derive2 { name="affyContam"; version="1.36.0"; sha256="17sjgm12y66z22y442mg9dh1b4yivi6cz8gdm49q3szibxgjprv8"; depends=[affy affydata Biobase]; };
+  affyILM = derive2 { name="affyILM"; version="1.30.0"; sha256="080z6cavmphrqh4y3cbf2cclzbljl7v2rwrcdsrz3h5pnisf064b"; depends=[affxparser affy Biobase gcrma]; };
+  affyPLM = derive2 { name="affyPLM"; version="1.54.0"; sha256="04h7wvxcdqkwpywlbwycvm9l5az6z5hqw44s33vcx9xpnhbsw7q8"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; };
+  affyPara = derive2 { name="affyPara"; version="1.38.0"; sha256="1jb80dlm3zmrfjq60y0gnb8530pma22b6zkd9crlczl120sfiybv"; depends=[affy affyio aplpack snow vsn]; };
+  affyQCReport = derive2 { name="affyQCReport"; version="1.56.0"; sha256="0jdhswh8y7fj55k3c4lk9nfr8vqp41mvg0jla1rh7y0qjh0fkv4c"; depends=[affy affyPLM Biobase genefilter lattice RColorBrewer simpleaffy xtable]; };
+  affycomp = derive2 { name="affycomp"; version="1.54.0"; sha256="12ckmzi5z0gxccrycgprvd0hzz52ygryqszgbkxdnnrcwcgbb4x0"; depends=[Biobase]; };
+  affycoretools = derive2 { name="affycoretools"; version="1.50.6"; sha256="11d5k4lnpsnm6aa5j3352l4cyfrlhigp2fnykkwkqwc7714a02mg"; depends=[affy AnnotationDbi Biobase BiocGenerics DBI edgeR gcrma ggplot2 GOstats gplots hwriter lattice limma oligoClasses ReportingTools RSQLite S4Vectors xtable]; };
+  affyio = derive2 { name="affyio"; version="1.48.0"; sha256="1pzzp3d3dbmyf34gvivfiprkpscn36rgvhrq853a1d3avcwr5ak9"; depends=[zlibbioc]; };
+  affylmGUI = derive2 { name="affylmGUI"; version="1.52.0"; sha256="1k1wkiajdnkcfrvdmhjgc969hyq7gk53ni2khqcw8jqv9kqqa1r1"; depends=[affy affyio affyPLM BiocGenerics BiocInstaller gcrma limma R2HTML tkrplot xtable]; };
+  affypdnn = derive2 { name="affypdnn"; version="1.52.0"; sha256="02js489yb6nni3i7jrl1zz0bm5xs6a47pb6nq72fmh1frwikx37w"; depends=[affy]; };
+  agilp = derive2 { name="agilp"; version="3.10.0"; sha256="0yyvmlyxajad1f7fx91bsq3rbwm5i4vyr1vpp6y4vicaxmnlkas3"; depends=[]; };
+  alpine = derive2 { name="alpine"; version="1.4.0"; sha256="16ip0pmdxm7bhnnk5z376miwqkl018m6wzdaxls7cszfv04alass"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph IRanges RBGL Rsamtools S4Vectors speedglm stringr SummarizedExperiment]; };
+  alsace = derive2 { name="alsace"; version="1.14.0"; sha256="08jdjyjxc6r513zlk7nsrnydsg2fxsws77g1wq0gpcgwx8m7s697"; depends=[ALS ptw]; };
+  altcdfenvs = derive2 { name="altcdfenvs"; version="2.40.0"; sha256="0fdy1yxgq9rnhgm17ml4wms56fsdmgr5hvqdjmpjslgwjn4922gk"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv S4Vectors]; };
+  ampliQueso = derive2 { name="ampliQueso"; version="1.16.0"; sha256="1d3nyps5pa4s52mwnsqhlm4pddqanns003qggs2qidb5rcbvhd4m"; depends=[DESeq doParallel edgeR foreach genefilter ggplot2 gplots knitr rgl rnaSeqMap samr statmod VariantAnnotation xtable]; };
+  amplican = derive2 { name="amplican"; version="1.0.0"; sha256="1lv0xvfk2spcl23hn005w7c4iyvsbrqgpvc5rbw6nkrxzmay5g16"; depends=[BiocGenerics BiocParallel Biostrings clusterCrit data_table dplyr GenomeInfoDb GenomicRanges ggbio ggplot2 ggthemes gridExtra gtable IRanges knitr Matrix matrixStats rmarkdown S4Vectors ShortRead stringr waffle]; };
+  anamiR = derive2 { name="anamiR"; version="1.6.1"; sha256="0mxpxangzbvx7rpzm4ak321pcgj6pa0nbslgvh8rplyz4sf6v0z6"; depends=[agricolae DBI DESeq2 gage gplots limma lumi RMySQL S4Vectors SummarizedExperiment]; };
+  annaffy = derive2 { name="annaffy"; version="1.50.0"; sha256="0qprkcvq56h6dwcylqsa0dq0nmv5bk280j89cwa3brm4jfncs4hm"; depends=[AnnotationDbi Biobase DBI GO_db KEGG_db]; };
+  annmap = derive2 { name="annmap"; version="1.20.0"; sha256="0q4lcx1j5av5jpn2wmarn7z32clzzdaprvpcagnvv453i11vp5bi"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; };
+  annotate = derive2 { name="annotate"; version="1.56.1"; sha256="14c5xd9kasvcwg5gbjys2c1vizxhlqlzxakqc2kml0kw97hmx0rq"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl XML xtable]; };
+  annotationTools = derive2 { name="annotationTools"; version="1.52.0"; sha256="1kmhgasb26dbq10d4r8wig5pjlbiqcqsa12zpgcsasj8kvpr2gpd"; depends=[Biobase]; };
+  annotatr = derive2 { name="annotatr"; version="1.4.1"; sha256="10izqb0x92fjpsycsyppvz6yidg8ssix452jfni692na7ih564y9"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges org_Dm_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db readr regioneR reshape2 rtracklayer S4Vectors TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Dmelanogaster_UCSC_dm6_ensGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene TxDb_Rnorvegicus_UCSC_rn5_refGene TxDb_Rnorvegicus_UCSC_rn6_refGene]; };
+  anota = derive2 { name="anota"; version="1.26.0"; sha256="1fvr9yvyf0m7m5dnfbzbm29kd1yqq78carv9v7xx60szi30w4lvq"; depends=[multtest qvalue]; };
+  anota2seq = derive2 { name="anota2seq"; version="1.0.0"; sha256="1pcmjlnvx3g2209l54jcbw044k6iz9zch3l01d1vr1cxiqag8smh"; depends=[DESeq2 edgeR limma multtest qvalue RColorBrewer SummarizedExperiment]; };
+  antiProfiles = derive2 { name="antiProfiles"; version="1.18.0"; sha256="03y6j3y0qvfzwbwzjgjsl5zlqayqj1400gj278m28l70l43ifnyg"; depends=[locfit matrixStats]; };
+  apComplex = derive2 { name="apComplex"; version="2.44.0"; sha256="132j6gm70h8sma82jd566hrih7npa217h5r6kqx4lq5yw3dlqcs1"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; };
+  apeglm = derive2 { name="apeglm"; version="1.0.3"; sha256="06j68szmxdr9c8qmmlcx85rv1hjl2rk52lagack83cr3q1gd10bj"; depends=[emdbook GenomicRanges SummarizedExperiment]; };
+  aroma_light = derive2 { name="aroma.light"; version="3.8.0"; sha256="0crnk6851jwypqr5l5jcbbay0vi5vvdjyisaf6z2d69c39wmr6sc"; depends=[matrixStats R_methodsS3 R_oo R_utils]; };
+  arrayMvout = derive2 { name="arrayMvout"; version="1.36.0"; sha256="0z35dyc1r4hn8bfmym5yi08s8mi9vn50pn0vvmggphzm25cwyln9"; depends=[affy affyContam Biobase lumi mdqc parody simpleaffy]; };
+  arrayQuality = derive2 { name="arrayQuality"; version="1.56.0"; sha256="14q0a9my42ya21615l46pllcw4dlnmqi8nac0m4iimlpjm0ic7w6"; depends=[gridBase hexbin limma marray RColorBrewer]; };
+  arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.34.0"; sha256="1rz3llx2ww5ngp7l2i1y4zxsjb8gsyhz1srs06s0asp49kq88qcv"; depends=[affy affyPLM beadarray Biobase Cairo genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG vsn XML]; };
+  attract = derive2 { name="attract"; version="1.30.0"; sha256="0af0jiscz7s3i8k6p7ygihb6fflhk57alqmn15b42bcn9a5d31l8"; depends=[AnnotationDbi Biobase cluster GOstats KEGGREST limma org_Hs_eg_db reactome_db]; };
+  bacon = derive2 { name="bacon"; version="1.6.0"; sha256="1i6y1dfmnqv5n5nbhfmq4qvkivd88sfvlypsm4xs4jsb8ij0aq5y"; depends=[BiocParallel ellipse ggplot2]; };
+  ballgown = derive2 { name="ballgown"; version="2.10.0"; sha256="10x49g1di4q134k1ialxb992lq3asg8qiib08a125la5yfwr179y"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; };
+  bamsignals = derive2 { name="bamsignals"; version="1.10.0"; sha256="15id6mkj95skb4kfafvfs2j7ylydal60c3pspcl7llhwpq6vcqvl"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; };
+  banocc = derive2 { name="banocc"; version="1.2.0"; sha256="0cc1kx01mpn1gg5ym6lij77zf0canricj0lchvx1vq5as6qazrbh"; depends=[coda mvtnorm rstan stringr]; };
+  basecallQC = derive2 { name="basecallQC"; version="1.2.0"; sha256="1kvknsz0s35r5zfc4gn08jzl914l54pbn92cwxbnay598zfg0shz"; depends=[data_table dplyr DT ggplot2 knitr lazyeval magrittr prettydoc raster rmarkdown ShortRead stringr tidyr XML yaml]; };
+  baySeq = derive2 { name="baySeq"; version="2.12.0"; sha256="1d918rmbzqncr7jw6byr3xyqybvcsgcyf96immqcl1c5xvgmqn5z"; depends=[abind edgeR GenomicRanges]; };
+  beachmat = derive2 { name="beachmat"; version="1.0.2"; sha256="0b6dzja5fbx4dawb7ixj67mlhw4fy62pfp20mfp918fy96zmdwqz"; depends=[DelayedArray HDF5Array Rcpp rhdf5 Rhdf5lib]; };
+  beadarray = derive2 { name="beadarray"; version="2.28.0"; sha256="0azcqszgggcllwpib8vh9zkl393hikc2qfaq9izprpdrnsb5amqi"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 illuminaio IRanges limma reshape2]; };
+  beadarraySNP = derive2 { name="beadarraySNP"; version="1.44.0"; sha256="15lr0mavyhnl0vzq4ndw2da6wxsvwrrrmrj9dzj1h8ml305m5r7w"; depends=[Biobase quantsmooth]; };
+  bgafun = derive2 { name="bgafun"; version="1.40.0"; sha256="1s3k333y7hxxkblkivi58gpxzd58divi01xv8sqdl2grvw0zj9d4"; depends=[ade4 made4 seqinr]; };
+  bgx = derive2 { name="bgx"; version="1.44.0"; sha256="0nbf0nnsv75a3zcwnl82wvg7ysbw8zsjk3zd7s5g61ma710smq07"; depends=[affy Biobase gcrma]; };
+  bigmelon = derive2 { name="bigmelon"; version="1.4.0"; sha256="1q8mp765bzj9bb9b25s2qn58z2iyy8956frwa0y8qz19hgg5iyvk"; depends=[Biobase gdsfmt GEOquery methylumi minfi wateRmelon]; };
+  bigmemoryExtras = derive2 { name="bigmemoryExtras"; version="1.26.1"; sha256="17zic27wmdxxrfli0qmi0lggl1kspyk8nh02bbwkyv28ia6j3g9h"; depends=[bigmemory]; };
+  bioCancer = derive2 { name="bioCancer"; version="1.6.0"; sha256="1k6ppqr6dpibfk0hf55zz3rd2vfprh9fzmd3wwahx87nd7qj8n6m"; depends=[AlgDesign AnnotationFuncs Biobase cgdsr clusterProfiler DiagrammeR DOSE dplyr DT geNetClassifier htmlwidgets org_Hs_eg_db plyr r_import radiant_data reactome_db ReactomePA shiny shinythemes tibble visNetwork XML]; };
+  bioDist = derive2 { name="bioDist"; version="1.50.0"; sha256="02y8dlkgjjryy73d04yqyf2aifsrivf5xmcn7i06qfch2w9fbnn9"; depends=[Biobase KernSmooth]; };
+  bioassayR = derive2 { name="bioassayR"; version="1.16.0"; sha256="1kzz10nzqgd3zjivnwnr6hwl2gsjvi14aslashvclcym1104vmxl"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; };
+  biobroom = derive2 { name="biobroom"; version="1.10.1"; sha256="095bkbqbd42bd6gnafwnahm9a9jg0cxa1ndnlx34v9yfwaxnjxk5"; depends=[Biobase broom dplyr tidyr]; };
+  biocGraph = derive2 { name="biocGraph"; version="1.40.0"; sha256="11lfiwgwlxp1b1yip4n320v6a31yvc2iy3c6jcq5h50ylc8srdyi"; depends=[BiocGenerics geneplotter graph Rgraphviz]; };
+  biocViews = derive2 { name="biocViews"; version="1.46.0"; sha256="09zyqj1kqc089lmh9sliy0acanx9zimcasvp71dsrg2bqm08r1md"; depends=[Biobase graph RBGL RCurl RUnit XML]; };
+  biomaRt = derive2 { name="biomaRt"; version="2.34.2"; sha256="1zlgs2zg0lmnk572p55n7m34nkxka8w10x8f2ndssjkffl2csy79"; depends=[AnnotationDbi httr progress RCurl stringr XML]; };
+  biomformat = derive2 { name="biomformat"; version="1.6.0"; sha256="0ss70nca7dadhjk0assrj6kqgwxrk9w7sxwynk2cmw8rn4kqiabs"; depends=[jsonlite Matrix plyr rhdf5]; };
+  biomvRCNS = derive2 { name="biomvRCNS"; version="1.18.0"; sha256="05lh0np314zhwd9imwkxfch5mn46964m4ws151x9r51siz262bmb"; depends=[GenomicRanges Gviz IRanges mvtnorm]; };
+  biosigner = derive2 { name="biosigner"; version="1.6.0"; sha256="0d6801vvw4778yjq0i5izgazm86h5v6xrfks4qrm3di0yh0nald9"; depends=[Biobase e1071 randomForest ropls]; };
+  biosvd = derive2 { name="biosvd"; version="2.14.0"; sha256="0xp032z4c1ws0hh52s67hxv254d6hn4kz9ggrkfwyjq0yby3s0lb"; depends=[Biobase BiocGenerics NMF]; };
+  biotmle = derive2 { name="biotmle"; version="1.3.0"; sha256="18012n55swz9grkpdkapklgzbxhqkxbrcc9nika3vvhfpwxi2n8l"; depends=[BiocParallel biotmleData DBI doFuture dplyr future ggplot2 limma magrittr Matrix SummarizedExperiment superheat SuperLearner tmle wesanderson]; };
+  biovizBase = derive2 { name="biovizBase"; version="1.26.0"; sha256="14l4vhj0a4ssr9m9zdzz3qpd4qw1mhgq5bmxq7jhrq3j9kmd6i2f"; depends=[AnnotationDbi AnnotationFilter BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; };
+  birta = derive2 { name="birta"; version="1.22.0"; sha256="1zwdgidcn82z5nnkzjr1p1z2vjl6bsajnisw7kz4w18br11rakwh"; depends=[Biobase limma MASS]; };
+  birte = derive2 { name="birte"; version="1.14.0"; sha256="1qlw1a0fd35b68kykvy1x6sr583n7qn88nixddsmkb963xvkksgv"; depends=[Biobase glmnet limma MASS nem Rcpp RcppArmadillo]; };
+  blima = derive2 { name="blima"; version="1.12.0"; sha256="00c3kfs9l9qr2wxj8h3a1x6bngkkz0i8axmmsh2k12jp5b3fk0sx"; depends=[beadarray Biobase BiocGenerics Rcpp]; };
+  bnbc = derive2 { name="bnbc"; version="1.0.0"; sha256="1vy2331idwwlcx243nrx61bns0f9whn21yq25nxs4mn903qy0kyw"; depends=[BiocGenerics EBImage GenomeInfoDb GenomicRanges IRanges matrixStats preprocessCore Rcpp S4Vectors SummarizedExperiment sva]; };
+  branchpointer = derive2 { name="branchpointer"; version="1.4.0"; sha256="07qjlrdhj2qs65911cmvrd8q9dq077nk00m6vpnwx1fx0n0js6kf"; depends=[biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg38 caret cowplot data_table gbm GenomeInfoDb GenomicRanges ggplot2 IRanges kernlab plyr rtracklayer S4Vectors stringr]; };
+  bridge = derive2 { name="bridge"; version="1.42.0"; sha256="0axck328cvwzhwlzi500l42x58k09c8zb84zq6hngpwnvlpcyyjk"; depends=[rama]; };
+  bsseq = derive2 { name="bsseq"; version="1.14.0"; sha256="0j6nrb6syhdmyg9s7s8mbvfyagq7khxg7nwdi32w2hcdyp05hkr4"; depends=[Biobase BiocGenerics data_table DelayedArray GenomeInfoDb GenomicRanges gtools HDF5Array IRanges limma locfit matrixStats permute R_utils S4Vectors scales SummarizedExperiment]; };
+  bumphunter = derive2 { name="bumphunter"; version="1.20.0"; sha256="0ag0h0xgja6fyind52hg5bcm482iv8rvwrnj7cfr0la1wndi2slh"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; };
+  caOmicsV = derive2 { name="caOmicsV"; version="1.8.0"; sha256="158jb9665151fm8dm6xs4cxv65wa2h7bn5ixhwqaa893wrlqjnh3"; depends=[bc3net igraph]; };
+  canceR = derive2 { name="canceR"; version="1.10.0"; sha256="0sgj40j9p6s14cmbp4gmlmqkjnfqigjilzbijlmfhcrg70ly3sqd"; depends=[Biobase cgdsr circlize Formula geNetClassifier GSEABase GSEAlm phenoTest plyr rpart RUnit survival tcltk2 tkrplot]; };
+  cancerclass = derive2 { name="cancerclass"; version="1.22.0"; sha256="07pxb2fsp9b9wa39xdsd5rddw9j9v20ai4hmsmwvm7mi4yr2r5b2"; depends=[binom Biobase]; };
+  casper = derive2 { name="casper"; version="2.12.0"; sha256="11xqxhjlgyk8pnlkscyc1prgvy707w5ls7n1bz1yjgqdg84nbv7m"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; };
+  categoryCompare = derive2 { name="categoryCompare"; version="1.22.0"; sha256="045xwg1h0jjbm4yd0f21c09ha91k6vzhrn3yqzzi4mhb07mpjczx"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCy3]; };
+  cbaf = derive2 { name="cbaf"; version="1.0.2"; sha256="0im83489xpbfppg9l46i6fv19ch41zccrf16gks2nyx64hrhllz3"; depends=[BiocFileCache cgdsr genefilter gplots RColorBrewer xlsx]; };
+  ccmap = derive2 { name="ccmap"; version="1.4.0"; sha256="185bvhmh9806lqd694dcrfl3mhn4k75kwnidsqs8ncqnb865hy01"; depends=[AnnotationDbi BiocInstaller ccdata data_table doParallel foreach lsa xgboost]; };
+  ccrepe = derive2 { name="ccrepe"; version="1.14.0"; sha256="0hpm9gcmc1pdd1rzg5l0jw1xswwqbaajkdnrvrdwbhcvl9jbk5yp"; depends=[infotheo]; };
+  cellGrowth = derive2 { name="cellGrowth"; version="1.22.0"; sha256="04cq203ab8yz32pjgh3b8kg7bzljqyjlyqxnfxl9ygk686jj4skm"; depends=[lattice locfit]; };
+  cellHTS2 = derive2 { name="cellHTS2"; version="2.42.0"; sha256="0c004givz5a0x7vxiqb6qz9a27qm53ggy6wwaaxplh9kzqjqszkx"; depends=[Biobase BiocGenerics Category genefilter GSEABase hwriter locfit prada RColorBrewer splots vsn]; };
+  cellTree = derive2 { name="cellTree"; version="1.8.0"; sha256="1c5mla2kf14c3pc02v16nlnhqmr2dh66l2liirc9myr7mgiqzaa8"; depends=[gplots igraph maptpx slam topGO topicmodels xtable]; };
+  cellbaseR = derive2 { name="cellbaseR"; version="1.2.0"; sha256="002af82q6blm65w8ig1sclp42mw6q6j3ag8vfv7zrxwxwxrsg9r3"; depends=[BiocParallel data_table doParallel foreach httr jsonlite pbapply R_utils Rsamtools tidyr]; };
+  cellity = derive2 { name="cellity"; version="1.6.0"; sha256="0szsa9q1znj5avyr2i83ih7m5hfq53786l9lmyxgc80mpzskj95s"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; };
+  cellscape = derive2 { name="cellscape"; version="1.2.0"; sha256="066lkswc296vvy0d3fdr2sp1s4s242jmnfj431vrqryvzv7678zm"; depends=[dplyr gtools htmlwidgets jsonlite plyr reshape2 stringr]; };
+  cghMCR = derive2 { name="cghMCR"; version="1.36.0"; sha256="10c6cnm2qbg0gb3klfv1xlwhbzj9x6aimxg7jnz29fgnn3xnd8cs"; depends=[BiocGenerics CNTools DNAcopy limma]; };
+  charm = derive2 { name="charm"; version="2.24.0"; sha256="0zr96pwq7zd45lffl67fxvzrxhmjk8pmh8rfawhc7mmazds2ip9a"; depends=[Biobase Biostrings BSgenome ff fields genefilter gtools IRanges limma nor1mix oligo oligoClasses preprocessCore RColorBrewer siggenes SQN sva]; };
+  chimera = derive2 { name="chimera"; version="1.20.0"; sha256="0z50pwynvyx2gc619b7w6chwdb7pxs2gf1ywh9vp7vzghkdv0wx4"; depends=[AnnotationDbi Biobase BSgenome_Hsapiens_UCSC_hg19 GenomicAlignments GenomicRanges Homo_sapiens Rsamtools TxDb_Hsapiens_UCSC_hg19_knownGene]; };
+  chimeraviz = derive2 { name="chimeraviz"; version="1.4.2"; sha256="1qqv2wzagq5kf4xijrvcm17bb1qgjjp2kx4fm2a8ky1rcwf50251"; depends=[AnnotationDbi AnnotationFilter ArgumentCheck BiocStyle Biostrings dplyr DT ensembldb GenomeInfoDb GenomicAlignments GenomicRanges graph Gviz IRanges org_Hs_eg_db plyr RCircos RColorBrewer readr Rgraphviz rmarkdown Rsamtools S4Vectors]; };
+  chipenrich = derive2 { name="chipenrich"; version="2.2.0"; sha256="0q24il68grjqdxpy7qjk6lw6l5zlmw6yybrbrbb8l42gljyi6s74"; depends=[AnnotationDbi BiocGenerics chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra mgcv org_Dm_eg_db org_Dr_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db plyr rms rtracklayer S4Vectors stringr]; };
+  chipseq = derive2 { name="chipseq"; version="1.28.0"; sha256="1ymcq77krwjzrkzzcw7i9909cmkqa7c0675z9wzvrrk81hgdssfq"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; };
+  chopsticks = derive2 { name="chopsticks"; version="1.42.0"; sha256="0awwk8k7vnsc0c1ic17m2mhmpin0s0ijd2gn7my9yysqzld9sncd"; depends=[survival]; };
+  chroGPS = derive2 { name="chroGPS"; version="1.26.0"; sha256="1lx12mlrj1syl2qaibm08b4vq8h2xw609vr6vxynl1wvvf8wdarp"; depends=[Biobase changepoint cluster DPpackage GenomicRanges ICSNP MASS]; };
+  chromDraw = derive2 { name="chromDraw"; version="2.8.0"; sha256="1lqrpbf322kxpx5068mw650ibzqksfmxc4j6q1fs4dv0ghpxdcsf"; depends=[GenomicRanges Rcpp]; };
+  chromPlot = derive2 { name="chromPlot"; version="1.6.0"; sha256="16qy1zqwlxc2pdkdb1jf8rknvr5cz2k4vbg2jybr6ks73pzagb47"; depends=[biomaRt GenomicRanges]; };
+  chromVAR = derive2 { name="chromVAR"; version="1.0.1"; sha256="0a62gp47ymspn9pbdz7j2vjpd0g7bhl333dicbs468qjjfpm8fbw"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; };
+  chromstaR = derive2 { name="chromstaR"; version="1.4.0"; sha256="1ky2z9v6gwwgzvd498ng9ac5s7x8nkgm5170gywr7bgw7lqrycjz"; depends=[bamsignals chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges mvtnorm reshape2 Rsamtools S4Vectors]; };
+  chromswitch = derive2 { name="chromswitch"; version="1.0.0"; sha256="1ym7vdj6lfwi4nja38lixm3vsxp296dpb90zwnmabws3dhysxhfy"; depends=[Biobase BiocParallel cluster DescTools dplyr GenomicRanges gplots IRanges lazyeval magrittr matrixStats mclust NMF rtracklayer S4Vectors tidyr]; };
+  cisPath = derive2 { name="cisPath"; version="1.18.0"; sha256="0ya1kkvghs23c4rqydkas68a7y6z16ihjnv8ljjy9h3i7pdani4h"; depends=[]; };
+  cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.16.0"; sha256="1r4iqnyrrjlx1crwy8ai7igkga3114nibqwj22kk364aqpr99jvv"; depends=[BiocGenerics BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomicRanges seqinr]; };
+  cleaver = derive2 { name="cleaver"; version="1.16.0"; sha256="1zzlmq121xix1hqa0cr7swda15jj4p9b05k8fc3531c6znhfcscp"; depends=[Biostrings IRanges S4Vectors]; };
+  clippda = derive2 { name="clippda"; version="1.28.0"; sha256="0bzbws6wzvqalhcf7m29fnn01iqyavdgmfrfhhdvhi77253pggqk"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; };
+  clipper = derive2 { name="clipper"; version="1.18.0"; sha256="0mwmqc274hdwsskjianbnyzjk755kqc2s0m91g7rim43hqddgw4a"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph RBGL Rcpp]; };
+  clonotypeR = derive2 { name="clonotypeR"; version="1.16.0"; sha256="079qgnprgzir8k94kxhq7xvv9hjnwlb7xgagcs71fr0rci0163pb"; depends=[]; };
+  clst = derive2 { name="clst"; version="1.26.0"; sha256="1h1dyd42k7m7r5gdf7ddf3c7v27k906xf6cv7nhvdf4d6nac73nw"; depends=[lattice ROC]; };
+  clstutils = derive2 { name="clstutils"; version="1.26.0"; sha256="19p0ral4xnf3gq99a0b4fc33fpngjll3pgr6ds3kkk00ynrwc3g6"; depends=[ape clst lattice rjson RSQLite]; };
+  clustComp = derive2 { name="clustComp"; version="1.6.0"; sha256="0gfddardn3ib4g2b70jk55hg09vjmwd182m013vnhl476896zpb3"; depends=[sm]; };
+  clusterExperiment = derive2 { name="clusterExperiment"; version="1.4.0"; sha256="07mcwjjff86d0jmj70za7j4h7kvs9j34s0z46rk5ivp71nxfnn4w"; depends=[ape cluster dendextend howmany kernlab limma locfdr matrixStats NMF phylobase RColorBrewer RSpectra stringr SummarizedExperiment]; };
+  clusterProfiler = derive2 { name="clusterProfiler"; version="3.6.0"; sha256="0667k479xc1c8b6gkhnki1z56pvp2v98r3ar4x5gbdv0kg9yby6s"; depends=[AnnotationDbi DOSE ggplot2 GO_db GOSemSim magrittr plyr qvalue rvcheck tidyr]; };
+  clusterSeq = derive2 { name="clusterSeq"; version="1.2.0"; sha256="1akcknsn89cllfjpb09nr8b3aalfp7bhyd57cs5i327hdjwlbgna"; depends=[baySeq BiocGenerics BiocParallel]; };
+  clusterStab = derive2 { name="clusterStab"; version="1.50.0"; sha256="0rrzxq8gcxk828lx5kmicrd1qk5xfj0nlzs5233a0x9az5xhrj38"; depends=[Biobase]; };
+  cn_farms = derive2 { name="cn.farms"; version="1.26.0"; sha256="001nynrmi568vv82b83jlc9wys8bj5qa6xljj777wdpc48f8swjg"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; };
+  cn_mops = derive2 { name="cn.mops"; version="1.24.0"; sha256="157355f5x3wv8p1kdn527yyvgh2zs9rc733f0rldxc9fabrsk4lz"; depends=[Biobase BiocGenerics exomeCopy GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; };
+  cnvGSA = derive2 { name="cnvGSA"; version="1.22.0"; sha256="0j7xhag1w64kzsmgpl5sz4grqcwffp84azhbx1gy3p83syxh8j4q"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; };
+  coGPS = derive2 { name="coGPS"; version="1.22.0"; sha256="0h4x9fa3glkrdakwyvzm07zx9w4cp1zrlxz8zhkq9k4j5n2n71c5"; depends=[]; };
+  coMET = derive2 { name="coMET"; version="1.10.2"; sha256="0ni5vsf1rwz52cmmh7p0kdjgyq295dyh1cyj1jj7jh8i44cghws3"; depends=[biomaRt colortools corrplot GenomicRanges ggbio ggplot2 gridExtra Gviz hash IRanges psych rtracklayer S4Vectors trackViewer]; };
+  coRNAi = derive2 { name="coRNAi"; version="1.25.2"; sha256="0npwxyy3bh8wz8zz94fz76aiiffg4l4lxhnjkz9nsgdn6r8n1ykk"; depends=[cellHTS2 gplots lattice limma locfit MASS]; };
+  cobindR = derive2 { name="cobindR"; version="1.16.0"; sha256="06r6wz7kpymdvghinimf2in0sxryyn3lmvdr6cmsnbc5pbzq4brs"; depends=[BiocGenerics biomaRt Biostrings BSgenome gmp gplots IRanges mclust rtfbs seqinr yaml]; };
+  codelink = derive2 { name="codelink"; version="1.46.0"; sha256="0j4k5b1bhif0rqqwv5kmqmc9rrgsvs659accimlp1n797raw78ds"; depends=[annotate Biobase BiocGenerics limma]; };
+  coexnet = derive2 { name="coexnet"; version="1.0.0"; sha256="12k0pkl4h410dhig9lpvpsbdhlsi5xbcqr981v7298dh7z4rxz4h"; depends=[acde affy Biobase GEOquery igraph limma minet rmarkdown siggenes STRINGdb SummarizedExperiment vsn]; };
+  cogena = derive2 { name="cogena"; version="1.12.0"; sha256="1ngkr5qbjpxi90jfv8nnap11s2vy4wfpd1hiimcn1sf78i3kvpcg"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2]; };
+  compEpiTools = derive2 { name="compEpiTools"; version="1.12.0"; sha256="0mg02j9z55xq0vwy87kcbv100br88m3bxsbdvrlff46k6gdzj55g"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; };
+  compcodeR = derive2 { name="compcodeR"; version="1.14.0"; sha256="09q0vk6fb56vf5bnd2jh3c896pr4fihr5ib05ih8f7db052dxbf4"; depends=[caTools edgeR gdata ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS modeest ROCR sm stringr vioplot]; };
+  consensusOV = derive2 { name="consensusOV"; version="1.0.0"; sha256="0pzb232b5jq9rzy5gk6cf114hid04jdwaqvrn5rzazr1fabrlg5y"; depends=[Biobase gdata genefu GSVA limma matrixStats randomForest]; };
+  consensusSeekeR = derive2 { name="consensusSeekeR"; version="1.6.0"; sha256="1565azz566mbc1yvraingqx42830775i21vp74xn9ldaqywaqizd"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors stringr]; };
+  contiBAIT = derive2 { name="contiBAIT"; version="1.6.0"; sha256="0by6qdmj4hs0mdjh4fia57m6ds50g2xaf5k8wc06w9ws47ryrqcs"; depends=[BH BiocParallel clue cluster colorspace diagram DNAcopy exomeCopy GenomicAlignments GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; };
+  conumee = derive2 { name="conumee"; version="1.12.0"; sha256="12pa1zf4v3kkpq1k34x45d1nakm3afh9rsc8byz53j3w97wdwpy4"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest IRanges minfi rtracklayer]; };
+  convert = derive2 { name="convert"; version="1.54.0"; sha256="0h74byyd87kd3hr902y4n93lvrq07p8iwkzcmj9m4pbpnmlpahi4"; depends=[Biobase limma marray]; };
+  copa = derive2 { name="copa"; version="1.46.0"; sha256="0aamwvm0qq4dsr14glzlnhqx90ljh820rgh5r4gppww5q040dw75"; depends=[Biobase]; };
+  copynumber = derive2 { name="copynumber"; version="1.18.0"; sha256="01kcwzl485yjrkgyg8117b1il957ss0v6rq4bbxf4ksd5fzcjmyx"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; };
+  coseq = derive2 { name="coseq"; version="1.2.0"; sha256="1jw6xmw32q6jdy8ypircd5q9grllh9bsgq0ga6n4a9qbv23syd9p"; depends=[BiocParallel capushe compositions corrplot DESeq2 e1071 edgeR ggplot2 gridExtra HTSCluster HTSFilter mvtnorm Rmixmod S4Vectors scales SummarizedExperiment]; };
+  cosmiq = derive2 { name="cosmiq"; version="1.12.0"; sha256="1g51zbi73hmc2nacai46if123kxlc1wdax0nq9ixipmyrqby74xm"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; };
+  covEB = derive2 { name="covEB"; version="1.4.0"; sha256="0wgimjzzysms0ccpaay36w5ad9pw1ip8imb2hxv4a86913agk1xv"; depends=[Biobase gsl igraph LaplacesDemon Matrix mvtnorm]; };
+  covRNA = derive2 { name="covRNA"; version="1.4.0"; sha256="0813fb4yr4ya5rp1lx2av7c6svpsdp7m6aq8rddxp9qbrcqpjz7v"; depends=[ade4 Biobase genefilter]; };
+  cpvSNP = derive2 { name="cpvSNP"; version="1.10.0"; sha256="1akyp9fdyi6sa9sf1c8rw43alvfx3dkdhqp1mifd6dz6q6030wd8"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; };
+  cqn = derive2 { name="cqn"; version="1.24.0"; sha256="1iw4a3f3hysbhgilv424yvglq0rj9vyryd0riq0ifzmg9dhim11n"; depends=[mclust nor1mix preprocessCore quantreg]; };
+  crisprseekplus = derive2 { name="crisprseekplus"; version="1.4.1"; sha256="1n9rl417pqlvcwlmbafw9gbjanxi9dynkcwb3zx8nak6mgy24y5c"; depends=[AnnotationDbi BiocInstaller BSgenome CRISPRseek DT GenomicFeatures GenomicRanges GUIDEseq hash shiny shinyjs]; };
+  crlmm = derive2 { name="crlmm"; version="1.36.0"; sha256="0i9094kkvxkg3djqvyv2sqfmpvyl5hlcwscas2pmkz6vn2ld1f9s"; depends=[affyio beanplot Biobase BiocGenerics ellipse ff foreach illuminaio lattice limma matrixStats mvtnorm oligoClasses preprocessCore RcppEigen SNPchip VGAM]; };
+  crossmeta = derive2 { name="crossmeta"; version="1.4.0"; sha256="08pj8jnrrpmrq11ljj0szrw985qhgnj42kawah1jg1siry3l2pqb"; depends=[affxparser affy AnnotationDbi Biobase BiocGenerics BiocInstaller ccmap data_table doParallel doRNG DT fdrtool foreach GEOquery ggplot2 limma matrixStats metaMA metap miniUI oligo pander plotly RColorBrewer rdrop2 reshape shiny stringr sva]; };
+  csaw = derive2 { name="csaw"; version="1.12.0"; sha256="0jw4dncqwf35fg6sf2syj9pwm9wrm0yc9wgichjwrh11ya9zfk49"; depends=[AnnotationDbi BiocGenerics BiocParallel edgeR GenomeInfoDb GenomicFeatures GenomicRanges IRanges limma Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; };
+  ctc = derive2 { name="ctc"; version="1.52.0"; sha256="0brqh8m0yj7i3794mmrh3bi2mkbhzpg52j7h8qiqyjh7y2l1i3kg"; depends=[amap]; };
+  ctsGE = derive2 { name="ctsGE"; version="1.4.0"; sha256="1hxgh559lqa2f80p73mcyz8k6l20hykyk7rmyhi7j9wa21y2mzwv"; depends=[ccaPP ggplot2 limma reshape2 shiny stringr]; };
+  cummeRbund = derive2 { name="cummeRbund"; version="2.20.0"; sha256="01v920fps6snqpn7gaairq1y76zfjcdya6j9pb9mfw2hkm8gad40"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer S4Vectors]; };
+  customProDB = derive2 { name="customProDB"; version="1.18.0"; sha256="0n7rjhvaqcg19qb40i4pwfqv62xzc8gj1y4v0qd9kyff1kh7dkxz"; depends=[AhoCorasickTrie AnnotationDbi biomaRt Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer S4Vectors stringr VariantAnnotation]; };
+  cycle = derive2 { name="cycle"; version="1.32.0"; sha256="03c3vr0mk5wyb77x3ypxqsaz2x16l9hasnakx3zbf6z8qrx92nss"; depends=[Biobase Mfuzz]; };
+  cydar = derive2 { name="cydar"; version="1.2.1"; sha256="0pxnq8g649ki4697xzydfvqyanzfxjzlcf8lbsnyx46fzqy39zwk"; depends=[Biobase BiocParallel flowCore Rcpp S4Vectors shiny SummarizedExperiment viridis]; };
+  cytofkit = derive2 { name="cytofkit"; version="1.10.0"; sha256="08lrnin6jpyjjgkmw2d71zvrsv0al10g28cqjcwwn9m6ax3nkf79"; depends=[Biobase colourpicker destiny doParallel e1071 flowCore FlowSOM ggplot2 ggrepel gplots igraph pdist plyr RANN Rcpp reshape2 Rtsne shiny shinyFiles vegan VGAM]; };
+  cytolib = derive2 { name="cytolib"; version="1.0.1"; sha256="1yyrh5f67qslqsi3pqrw9ffz31sglp7jj5m83mhsjlpk4w20fv7i"; depends=[BH RProtoBufLib]; };
+  dSimer = derive2 { name="dSimer"; version="1.4.0"; sha256="1rgmdc4q8vwdph1szzd3gzcdc53pr1w037yc19vgqm16ip2ryhff"; depends=[AnnotationDbi ggplot2 GO_db igraph org_Hs_eg_db Rcpp reshape2]; };
+  daMA = derive2 { name="daMA"; version="1.50.0"; sha256="1hqqm4x8w65xv0kdqh14a0mh24p71k934rh8c70bi025rxn3pq76"; depends=[MASS]; };
+  dada2 = derive2 { name="dada2"; version="1.6.0"; sha256="0lcfwh26cy1fpjxq2i5jb60rs4s0jnv8l9cxijqaakbs3xhmzdkr"; depends=[Biostrings data_table ggplot2 Rcpp RcppParallel reshape2 ShortRead]; };
+  dagLogo = derive2 { name="dagLogo"; version="1.16.1"; sha256="1bvqpx0bxp4b0vzjf8zhbxphqpf4sggjn10d27pd462qpfg1wkaj"; depends=[biomaRt Biostrings grImport motifStack pheatmap]; };
+  dcGSA = derive2 { name="dcGSA"; version="1.6.0"; sha256="1xi3hx06bd376cfyclpk7crxa8crwkxk276vcssr681w0fhnrk06"; depends=[BiocParallel Matrix]; };
+  ddCt = derive2 { name="ddCt"; version="1.34.0"; sha256="0h6s2x9xa5mnvp653pv0qsk3yq7pdvdiqz0321q08hz7ai0r7vdd"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; };
+  ddgraph = derive2 { name="ddgraph"; version="1.21.0"; sha256="09m60a85cyjx4hjxqvp9qz1y2jkqwpafxy95l80xmqygal5d4jc4"; depends=[bnlearn graph gtools MASS pcalg plotrix RColorBrewer Rcpp]; };
+  debrowser = derive2 { name="debrowser"; version="1.6.8"; sha256="11ra9rppy6japi10xy523g7a72cj2zkjb9c9581wy4wrw2kym2rj"; depends=[annotate AnnotationDbi baySeq clusterProfiler d3heatmap DESeq2 DOSE DT edgeR GenomicRanges ggplot2 ggvis googleAuthR gplots igraph IRanges jsonlite limma org_Hs_eg_db org_Mm_eg_db pathview RColorBrewer RCurl reshape2 S4Vectors shiny shinyBS shinydashboard shinyjs stringi SummarizedExperiment sva V8]; };
+  deepSNV = derive2 { name="deepSNV"; version="1.24.0"; sha256="16k8wv495fx5qq1xnv4da9bbkp90jbqklry2zynz1fmfhfxcdmvn"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; };
+  deltaGseg = derive2 { name="deltaGseg"; version="1.18.0"; sha256="1bmm83n8sw16492nzhbh585crzrrwajcfbm2yr8kgbnnv370x3rj"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; };
+  derfinder = derive2 { name="derfinder"; version="1.12.6"; sha256="1bp8qw3m5crncwz586b4f4w1x0kcm6r39md3w8il2d9xlvjvmml0"; depends=[AnnotationDbi BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; };
+  derfinderHelper = derive2 { name="derfinderHelper"; version="1.12.0"; sha256="06aj2h98vm27pc1laxi7pjxhwxm756scl2r9d8f1x1gsg2aa0k1b"; depends=[IRanges Matrix S4Vectors]; };
+  derfinderPlot = derive2 { name="derfinderPlot"; version="1.12.3"; sha256="1p0pqy2rdd4lmz91gyxwcm1gpnyb89qzy9j9fsm1jy84iaanan40"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer reshape2 S4Vectors scales]; };
+  destiny = derive2 { name="destiny"; version="2.6.1"; sha256="1gyjh9lgqql67zsm4zz4lg77kdw5wbgkl9mraaww1aich167aqfl"; depends=[Biobase BiocGenerics ggplot2 Hmisc igraph Matrix proxy Rcpp RcppEigen scales scatterplot3d smoother VIM]; };
+  dexus = derive2 { name="dexus"; version="1.18.0"; sha256="1l9x51w1q58zvh53slcmw8rbb2v1sii380acap1frp4idi56wmig"; depends=[BiocGenerics]; };
+  diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.60.0"; sha256="0bfs3n9crca46q0cgkpknl4xf5vc4dr5anly9kn77prb1zp9b0p3"; depends=[minpack_lm]; };
+  diffHic = derive2 { name="diffHic"; version="1.10.0"; sha256="0j7vmgpxakzk3gazdy06xhpcqnb19pib0jxfz67nc7fgkyrmhzqi"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit Rcpp rhdf5 Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; };
+  diffloop = derive2 { name="diffloop"; version="1.6.0"; sha256="0gv6wimcdfnbzqi0d5j8af6siqcqgaa7asmkz2nr6lvcicp3b6nc"; depends=[Biobase biomaRt data_table dplyr edgeR foreach GenomeInfoDb GenomicRanges ggplot2 IRanges limma locfit matrixStats pbapply plyr readr reshape2 rtracklayer S4Vectors statmod Sushi]; };
+  diffuStats = derive2 { name="diffuStats"; version="0.102.0"; sha256="08dhygy58rr7zb8r2vrrxfdrdcyzdjwmafz0q0y65ay4zxn2s4w0"; depends=[expm igraph MASS Matrix plyr precrec Rcpp RcppArmadillo RcppParallel]; };
+  diggit = derive2 { name="diggit"; version="1.10.0"; sha256="06swg9sz8csim6nq5cdpx9aqzsrfi1yhid4yb61ivyxf9p5hl1rn"; depends=[Biobase ks viper]; };
+  discordant = derive2 { name="discordant"; version="1.2.0"; sha256="105lwz17r2vjzd9qz869p8qrjabac418nj6hxx8n8dxbykgyxihq"; depends=[Biobase biwt gtools MASS]; };
+  dks = derive2 { name="dks"; version="1.24.0"; sha256="1fd4lyzfgf8iz3aqgayvvf2n166aq1hl57b6syfwazi42xfjxlhk"; depends=[cubature]; };
+  domainsignatures = derive2 { name="domainsignatures"; version="1.38.0"; sha256="19c8n4xrwh9f46a5b41g7rp9h1inf9yjw0kr9ihd70gspbizx0h3"; depends=[AnnotationDbi biomaRt KEGG_db prada]; };
+  doppelgangR = derive2 { name="doppelgangR"; version="1.6.0"; sha256="0hk01sayqnqidx768kgassdpqfavckbksgd40qf4jn9xaxq5a18f"; depends=[Biobase BiocParallel digest impute mnormt sva]; };
+  dualKS = derive2 { name="dualKS"; version="1.38.0"; sha256="007h6bnm01h75gxzwxg8jwzzpsfa69b8wzf5ds3grnsx8c7rm9rv"; depends=[affy Biobase]; };
+  dupRadar = derive2 { name="dupRadar"; version="1.8.0"; sha256="17b00ddsdnmhlba5rfylaxs3i5hfm6h959n6mmch4j02iy10bdpn"; depends=[Rsubread]; };
+  dyebias = derive2 { name="dyebias"; version="1.38.0"; sha256="18mliq9ja1mdl18m0ys52fri1pjw6bj9zx3s3mc623kiki5zc4jk"; depends=[Biobase marray]; };
+  easyRNASeq = derive2 { name="easyRNASeq"; version="2.14.0"; sha256="11l0bj9wcp5k0a5nq0adn4w891cllfdn7qrqg76k7klx5h0p37bx"; depends=[Biobase BiocGenerics BiocParallel biomaRt Biostrings DESeq edgeR GenomeInfoDb genomeIntervals GenomicAlignments GenomicRanges IRanges locfit LSD Rsamtools S4Vectors ShortRead SummarizedExperiment]; };
+  ecolitk = derive2 { name="ecolitk"; version="1.50.0"; sha256="0xagah7nrj6dghl2ib75l8wlwj7kzdssnlbpjdwhm67nsys3hvx4"; depends=[Biobase]; };
+  edge = derive2 { name="edge"; version="2.10.0"; sha256="1knr03yiw0cq0kj9hklmkaap4qiphm2ph51bjn1m5cn7nyckramz"; depends=[Biobase jackstraw MASS qvalue snm sva]; };
+  edgeR = derive2 { name="edgeR"; version="3.20.8"; sha256="0g7bj6w61blw3m22hw9rc01n554k9qkjizh7njr3j4shmhads58d"; depends=[limma locfit Rcpp]; };
+  eegc = derive2 { name="eegc"; version="1.4.0"; sha256="1v3586qddx1l74ha083x36m3lqdblrhmwd63k22jzfpkh30adz09"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; };
+  eiR = derive2 { name="eiR"; version="1.18.0"; sha256="1ypd7yq9c6mqp7nm984dm60qzvwy4qb81zrp2mvp7g87c5vdj2a3"; depends=[BiocGenerics ChemmineR DBI digest gespeR RcppAnnoy RCurl RUnit snow snowfall]; };
+  eisa = derive2 { name="eisa"; version="1.30.0"; sha256="11ydmv5kddq75sknbax1aiyxq60rx146qa7pd3m09axjzvk83mq5"; depends=[AnnotationDbi Biobase BiocGenerics Category DBI genefilter isa2]; };
+  ensemblVEP = derive2 { name="ensemblVEP"; version="1.20.0"; sha256="1xza76fyqp8xikc98ipamsz6175nirdv7aisfvkb9nmzba4q0r62"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; };
+  ensembldb = derive2 { name="ensembldb"; version="2.2.2"; sha256="1yngndkf3588z91z0a2fvkg423p26ajm6xv1p27x0l9mzhhaqq3k"; depends=[AnnotationDbi AnnotationFilter AnnotationHub Biobase BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges ProtGenerics Rsamtools RSQLite rtracklayer S4Vectors]; };
+  epiNEM = derive2 { name="epiNEM"; version="1.2.0"; sha256="0d3r4m0q3w2ljf4bm03z1dpiiih9cshzpbi4nnqq3jwls82f7nlq"; depends=[BoolNet e1071 graph gtools igraph lattice latticeExtra minet nem pcalg RColorBrewer]; };
+  epigenomix = derive2 { name="epigenomix"; version="1.18.0"; sha256="0x567fxak38ngy5hs3x567381aigh1x1fb8ww8xvmpf2wlzrlfwp"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; };
+  epivizr = derive2 { name="epivizr"; version="2.8.0"; sha256="088f28jscw2w5p06jhp2qxjfpwscrf0kbq5lnlnmmshc1ghbmdvw"; depends=[epivizrData epivizrServer GenomicRanges IRanges S4Vectors]; };
+  epivizrChart = derive2 { name="epivizrChart"; version="1.0.0"; sha256="1xgqv1gqb8fksp43313fsmgb73h8z568s28zd039a7d7v4pi0n0v"; depends=[epivizrData epivizrServer htmltools rjson]; };
+  epivizrData = derive2 { name="epivizrData"; version="1.6.0"; sha256="101ibx9nq17dnn5j8kjy31pm8ly4nyzs1rrlbsvk0140avjhz154"; depends=[Biobase ensembldb epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; };
+  epivizrServer = derive2 { name="epivizrServer"; version="1.6.0"; sha256="0qa13yvq9ywa3m1n2vmi60087cgg18rpnqbr1m7f137ivnxyb11b"; depends=[httpuv mime R6 rjson]; };
+  epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.6.0"; sha256="0rbd2kmdi0y97mx72gkg93s97slfig1k1bgcv5maknsqqqcwzz8j"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; };
+  erccdashboard = derive2 { name="erccdashboard"; version="1.12.0"; sha256="07dc80l8618rlv3sywr0gp9i49kq66i9glx3md2r0k5c4l67mw37"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr qvalue reshape2 ROCR scales stringr]; };
+  erma = derive2 { name="erma"; version="0.10.0"; sha256="0gcfs9g8vvdv5vmq9b21kd8sq5mizjj49nfzd4in9zvp4b9v7x1g"; depends=[AnnotationDbi Biobase BiocGenerics foreach GenomicFiles GenomicRanges ggplot2 Homo_sapiens rtracklayer S4Vectors shiny SummarizedExperiment]; };
+  esATAC = derive2 { name="esATAC"; version="1.0.19"; sha256="1ikihh939c8iqm9w582s0kjmnh7yqgnj3dq8y8vfvpbill4f2zyd"; depends=[AnnotationDbi BiocGenerics BiocInstaller Biostrings BSgenome ChIPseeker clusterProfiler corrplot DiagrammeR digest GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 igraph IRanges JASPAR2016 knitr magrittr R_utils Rbowtie2 Rcpp rJava rmarkdown Rsamtools rtracklayer S4Vectors ShortRead TFBSTools VennDiagram]; };
+  esetVis = derive2 { name="esetVis"; version="1.4.0"; sha256="1yb238lxy8sqmxim3zd25rp642cpz8p25vdffjlija2wivq8phn1"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; };
+  eudysbiome = derive2 { name="eudysbiome"; version="1.8.0"; sha256="13ayrigzy55h6an3am9f77r6mzcvyfcpxpby71xilhaf6mjhyj39"; depends=[Biostrings plyr R_utils Rsamtools]; };
+  exomeCopy = derive2 { name="exomeCopy"; version="1.24.0"; sha256="17rpa7mck2rrivrv5vqk4abb094v79v8dbzh6n5dj4hnw53b9wif"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; };
+  exomePeak = derive2 { name="exomePeak"; version="2.13.2"; sha256="01fz3icmwq0zblvl070vmhr6fm0nxgzrvyl5xr68sv234by2nml7"; depends=[GenomicAlignments GenomicFeatures Rsamtools rtracklayer]; };
+  explorase = derive2 { name="explorase"; version="1.42.0"; sha256="1xqilix4fn603p0lqrdgl6npc5j0fcy8rcc37clzl3sm4mfklhdd"; depends=[limma rggobi RGtk2]; };
+  fCCAC = derive2 { name="fCCAC"; version="1.4.0"; sha256="0fnjh0h4hn9qzz9f3hc09piwiizsf5ljz82k8f30c81d65bhx6qj"; depends=[ComplexHeatmap fda genomation GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors]; };
+  fCI = derive2 { name="fCI"; version="1.8.0"; sha256="0p85pya1k37qjnvbjqg96ydip7dd1xkw9zxj35fyw3hxsbrd0d7g"; depends=[FNN gtools psych rgl VennDiagram zoo]; };
+  fabia = derive2 { name="fabia"; version="2.24.0"; sha256="1c4kfn2gdwg72ypyfvsqbgk2pl4qqhr6pjnzd7xla9w1whlkag07"; depends=[Biobase]; };
+  facopy = derive2 { name="facopy"; version="1.12.0"; sha256="1m3sj06p9inl3p1aslj7ybx7hrc6zm9zxb2bdvxwyn1wwlgkcx35"; depends=[annotate cgdsr coin data_table DOSE facopy_annot FactoMineR ggplot2 GO_db GOstats graphite gridExtra igraph IRanges MASS nnet reshape2 Rgraphviz S4Vectors scales]; };
+  factDesign = derive2 { name="factDesign"; version="1.54.0"; sha256="1hpdf64ghfnpb2rd6qmha8yh5vy2gcnh8jk1pgj951k5vcxrx9zc"; depends=[Biobase]; };
+  farms = derive2 { name="farms"; version="1.30.0"; sha256="0k5nygacdj38qw828xn417ahbsanf074r5pknl34l66f4vggpkv2"; depends=[affy Biobase MASS]; };
+  fastLiquidAssociation = derive2 { name="fastLiquidAssociation"; version="1.14.0"; sha256="05cyryfbkww757y15wg08iblm1vv3sfgkb54kfviyc5lg8r789kr"; depends=[doParallel Hmisc impute LiquidAssociation preprocessCore WGCNA]; };
+  fastseg = derive2 { name="fastseg"; version="1.24.0"; sha256="0dd7nr3klwz9ailwshnbynhd62lwb8zbbpj6jf3igpb94yi6x2jp"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors]; };
+  fdrame = derive2 { name="fdrame"; version="1.50.0"; sha256="1nnaibcxkfr6nzw7vm5ihhbzzcvvg2y9r65msy02k1x5gwd6ca43"; depends=[]; };
+  ffpe = derive2 { name="ffpe"; version="1.22.0"; sha256="0c0l1wb4ydxz6rddvg0bv9j75dv892mm452imm3lh7s5q0gq6004"; depends=[affy Biobase BiocGenerics lumi methylumi sfsmisc TTR]; };
+  fgsea = derive2 { name="fgsea"; version="1.4.1"; sha256="187c8xckx0s1p19i85nsiapgb3mppjqxp7zyld5hqyjvw3zcdj50"; depends=[BiocParallel data_table fastmatch ggplot2 gridExtra Rcpp]; };
+  flagme = derive2 { name="flagme"; version="1.34.0"; sha256="15rbh6v22mjg9ms6kkl7z056k3bm117klw16hl69mjpd3crcs1by"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; };
+  flipflop = derive2 { name="flipflop"; version="1.16.0"; sha256="1fwvffjgf45plchwkcmfi298y2nf4ynd7dxrb2xlcw4gzx6b3ghs"; depends=[GenomicRanges IRanges Matrix]; };
+  flowAI = derive2 { name="flowAI"; version="1.6.3"; sha256="1xczc62ifjq4zr5xyjhf96rp8anzw2sfg0jmgplzs0na05d4601g"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 scales]; };
+  flowBeads = derive2 { name="flowBeads"; version="1.16.0"; sha256="06jcflmdbm9f8zjh2vxbi093v16hqyi5q0c0fmvg59384p9z0315"; depends=[Biobase flowCore knitr rrcov xtable]; };
+  flowBin = derive2 { name="flowBin"; version="1.14.0"; sha256="1svbph6drm4lb5k8l8x2sjl4bfanyrjy1f5nky7rrgqb00hhdq5h"; depends=[BiocGenerics class flowCore flowFP limma snow]; };
+  flowCHIC = derive2 { name="flowCHIC"; version="1.12.0"; sha256="12yl4jwxy6mz047yqvzwkvp1yy4d323flzmpgfpv6v3pvz7x82lq"; depends=[EBImage flowCore ggplot2 hexbin vegan]; };
+  flowCL = derive2 { name="flowCL"; version="1.16.2"; sha256="1zaic9cf7xw4qmdcrhi9a9zcxvxlnn9iii0a6lnwwkpsspgn1bnj"; depends=[graph Rgraphviz SPARQL]; };
+  flowClean = derive2 { name="flowClean"; version="1.16.0"; sha256="1crpgaw1bilvgcyr93c2qx6jbx18ca52dzr6r8cqznlfxdnz48jj"; depends=[bit changepoint flowCore sfsmisc]; };
+  flowClust = derive2 { name="flowClust"; version="3.16.0"; sha256="1c8ppgy4i42l250m71ri3gbw8mw1yw2saplx9wrhnykvwxnsx210"; depends=[Biobase BiocGenerics clue ellipse flowCore flowViz graph MCMCpack mnormt RBGL]; };
+  flowCore = derive2 { name="flowCore"; version="1.44.1"; sha256="1ain06wjny8f5khpf6cmz683rzq1jfidk4p3mz1v5ybw54dxvl7z"; depends=[BH Biobase BiocGenerics corpcor graph matrixStats Rcpp rrcov]; };
+  flowCyBar = derive2 { name="flowCyBar"; version="1.14.0"; sha256="06wzxlw02x5nzn5qc91yjawrmimsns2kmw4rm3rgbh10d4qh8r09"; depends=[gplots vegan]; };
+  flowDensity = derive2 { name="flowDensity"; version="1.12.0"; sha256="1df181ilq7mnwlfvyjjvgd262f2sq09c5wg5fpf531m5jiaj6qpk"; depends=[car flowCore flowWorkspace GEOmap gplots RFOC rgeos sp]; };
+  flowFP = derive2 { name="flowFP"; version="1.36.0"; sha256="0kpw90pxappz3mbidfqjv8l6cpc4qg2hgi1wqh4rzx8b2bdl5a8f"; depends=[Biobase BiocGenerics flowCore flowViz]; };
+  flowFit = derive2 { name="flowFit"; version="1.16.0"; sha256="0ssyzfngfx31p7v96hgzfzc94n081fll97r6i44pycg42j9bkf6k"; depends=[flowCore flowViz gplots kza minpack_lm]; };
+  flowMap = derive2 { name="flowMap"; version="1.16.0"; sha256="1gpxvnil740xnhiphgammis89819vf5s9q06nchwh92j2phj8afr"; depends=[abind ade4 doParallel Matrix reshape2 scales]; };
+  flowMatch = derive2 { name="flowMatch"; version="1.14.0"; sha256="0x0719w1k42v9v3i717hyvf3wqii6ldrjmjpvak6jl7w2kn4yfn3"; depends=[Biobase flowCore Rcpp]; };
+  flowMeans = derive2 { name="flowMeans"; version="1.38.0"; sha256="0mqgblmfili3nxnfz5h0hrhdl6wz4ylnslyx17kw7pyd0wskd26v"; depends=[Biobase feature flowCore rrcov]; };
+  flowMerge = derive2 { name="flowMerge"; version="2.26.0"; sha256="0lpgipgrirhc5i5qzby1krg7vbd4jg566y3i5k18lxsccws12zx6"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; };
+  flowPeaks = derive2 { name="flowPeaks"; version="1.22.0"; sha256="0cs0sbs9cx3syjv3dhl9b56s8ccpb00cwz9z18j31yaijl1h13vi"; depends=[]; };
+  flowPloidy = derive2 { name="flowPloidy"; version="1.4.1"; sha256="1iqyc6b8lp22lr4xik4ibixc4x6grxvmg18bp2dflp6xkyy7vrq5"; depends=[car caTools flowCore knitr minpack_lm rmarkdown shiny]; };
+  flowPlots = derive2 { name="flowPlots"; version="1.26.0"; sha256="0bg523vxnk3kjwwplqykamdfqmyr7b0laxkml06rfr0rbj5lcdc5"; depends=[]; };
+  flowQ = derive2 { name="flowQ"; version="1.38.0"; sha256="1vxc7fn747x7i2v0nv821nx9z1d5d4dyd6fa0vbmn7smjkbdxbzd"; depends=[BiocGenerics bioDist flowCore flowViz geneplotter IRanges lattice latticeExtra mvoutlier outliers parody RColorBrewer]; };
+  flowQB = derive2 { name="flowQB"; version="2.6.0"; sha256="04hjsswngbxi40rxcb13hzvzm8y7yzpr6qzwhnishp0a5614rzka"; depends=[extremevalues flowCore]; };
+  flowStats = derive2 { name="flowStats"; version="3.36.0"; sha256="0l5czm38d2vscw4hbnd79y57gjhdymqjy8kyq86s5g6h4kzir4x7"; depends=[Biobase BiocGenerics cluster fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS ncdfFlow]; };
+  flowTime = derive2 { name="flowTime"; version="1.2.0"; sha256="0308bdkyc1q5s9aasmxdxqh8gzwcmxxdnsamyjl6dkm62s64cf7j"; depends=[flowCore plyr]; };
+  flowTrans = derive2 { name="flowTrans"; version="1.30.0"; sha256="0sjpsv908v4gxi55acmmx5c07923adn2p1x8z3bisxv2pwx1n5fw"; depends=[flowClust flowCore flowViz]; };
+  flowType = derive2 { name="flowType"; version="2.16.0"; sha256="16z3yxqsgvnwchnfd7bnkj403xxhdifiv8a0ddisy9y1rnil2qpj"; depends=[BH Biobase flowClust flowCore flowMeans flowMerge Rcpp rrcov sfsmisc]; };
+  flowUtils = derive2 { name="flowUtils"; version="1.42.0"; sha256="0d4ab30xp722h9avi785wj8z1qz7dy65z5faqf3jc6j6v40bzikq"; depends=[Biobase corpcor flowCore graph RUnit XML]; };
+  flowVS = derive2 { name="flowVS"; version="1.10.0"; sha256="07vcqcxzd9cw4hvc1yld2v05zcxqs5p9spka2l80pmsjr0aij043"; depends=[flowCore flowStats flowViz]; };
+  flowViz = derive2 { name="flowViz"; version="1.42.0"; sha256="1fbr0snid9vgb133sb5dwkk469n465p8r490r67vsmm8wqsf6iyl"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; };
+  flowWorkspace = derive2 { name="flowWorkspace"; version="3.26.5"; sha256="1j1gq3izyngjbspy6c8l8wjdhv3jm21i6aqv8sz262z2g9krqdyf"; depends=[BH Biobase BiocGenerics cytolib data_table dplyr flowCore flowViz graph gridExtra lattice latticeExtra ncdfFlow RBGL RColorBrewer Rcpp Rgraphviz RProtoBufLib scales stringr XML]; };
+  flowcatchR = derive2 { name="flowcatchR"; version="1.12.0"; sha256="0i6r86b1g98kaw8nhbnjjrw8gw6vvhfpr5r7dn4whl4hwlizc5qx"; depends=[abind BiocParallel colorRamps EBImage rgl]; };
+  fmcsR = derive2 { name="fmcsR"; version="1.20.0"; sha256="0cbbil337zbb968zibkysrmpc8bwlpn7rl908zyvzvj8v11lxzcc"; depends=[BiocGenerics ChemmineR RUnit]; };
+  focalCall = derive2 { name="focalCall"; version="1.12.0"; sha256="07lb0ijdsryd31dxp5fgp393p9f21b7in3rnf9j43qn8wmz48hnl"; depends=[CGHcall]; };
+  frma = derive2 { name="frma"; version="1.30.1"; sha256="0319m8l7n2sfp4m6zipm7pkc57xikb735qk605m952m8ra08v8ml"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; };
+  frmaTools = derive2 { name="frmaTools"; version="1.30.0"; sha256="02z7igfcvhjg9f36snmmif8d7lsca9n9izg8zc543hcy7s704aa2"; depends=[affy Biobase DBI preprocessCore]; };
+  funtooNorm = derive2 { name="funtooNorm"; version="1.2.0"; sha256="09n7vq5f26px57sy35s29b8pmb9wcx6kii0h0i354sr3yg21ccpc"; depends=[GenomeInfoDb IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest matrixStats minfi pls]; };
+  gCMAP = derive2 { name="gCMAP"; version="1.22.0"; sha256="1ghaidxm8wpg9jx8s9ymlkciwkxjnlr5g5yfjappj7mf4qaqxvil"; depends=[annotate AnnotationDbi bigmemory bigmemoryExtras Biobase Category DESeq genefilter GSEABase GSEAlm limma Matrix]; };
+  gCMAPWeb = derive2 { name="gCMAPWeb"; version="1.18.0"; sha256="152nd7vxz3cja8xmg5rq4j08lvd7cw1y09a737bfdq1zwrxc22v8"; depends=[annotate AnnotationDbi Biobase BiocGenerics brew gCMAP GSEABase hwriter Rook yaml]; };
+  gCrisprTools = derive2 { name="gCrisprTools"; version="1.6.0"; sha256="0x7bsnhs3qwimfkkxr8yslawdfy83x5ip8j2wlwq4m9hqwqk060g"; depends=[Biobase ggplot2 limma PANTHER_db rmarkdown RobustRankAggreg]; };
+  gQTLBase = derive2 { name="gQTLBase"; version="1.10.0"; sha256="1756vfcj2dkkgcmfkkg7qdaig36dv9gfvpypn9rbrky56wm1p035"; depends=[BatchJobs BBmisc BiocGenerics bit doParallel ff ffbase foreach GenomicFiles GenomicRanges rtracklayer S4Vectors SummarizedExperiment]; };
+  gQTLstats = derive2 { name="gQTLstats"; version="1.10.1"; sha256="0gvq1sf2zjbkk431x40z6wql3c1rpclnnwa2f1hvykb8mmw70kmq"; depends=[AnnotationDbi BatchJobs BBmisc beeswarm Biobase BiocGenerics doParallel dplyr erma ffbase foreach GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges ggbeeswarm ggplot2 gQTLBase HardyWeinberg IRanges ldblock limma mgcv plotly reshape2 S4Vectors shiny snpStats SummarizedExperiment VariantAnnotation]; };
+  gaga = derive2 { name="gaga"; version="2.24.0"; sha256="1fzk3f4n612iwhxvzd81igl62hb674cjac959ivp8gjx8akw5jpx"; depends=[Biobase coda EBarrays mgcv]; };
+  gage = derive2 { name="gage"; version="2.28.2"; sha256="0h0mlhns9j7cpfksvdlvx9jb7szm3r1dwqb3s4s8p8hmkb9byyii"; depends=[AnnotationDbi graph KEGGREST]; };
+  gaggle = derive2 { name="gaggle"; version="1.46.0"; sha256="0x6xydavk1dfdqrl97xawq5difaa4v9lhy11941bvfaa9xz01jpv"; depends=[graph rJava RUnit]; };
+  gaia = derive2 { name="gaia"; version="2.22.0"; sha256="160l7df4my5n29z2x9579dh0519vyk4d5m4hpmjacr9bh5r9n3va"; depends=[]; };
+  garfield = derive2 { name="garfield"; version="1.6.0"; sha256="0lrlk42ic38my0gkkyakkxaxijs6rykkwhvka9zay82spcszmqv8"; depends=[]; };
+  gaucho = derive2 { name="gaucho"; version="1.14.0"; sha256="0yf7y9qipdnzcll34q93dyi7q7bmq0iwg38s74d3984wjsqj3l61"; depends=[GA graph heatmap_plus png Rgraphviz]; };
+  gcapc = derive2 { name="gcapc"; version="1.2.0"; sha256="0qa9yy6ljnbmb3a5wlwx75p8bwi665d24i029b9drw72zwqv4v81"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS matrixStats Rsamtools S4Vectors]; };
+  gcatest = derive2 { name="gcatest"; version="1.8.0"; sha256="0spcxaj4finimyv812j13xp3nxj249blwwaxl308bd84kqd02pnn"; depends=[lfa]; };
+  gcrma = derive2 { name="gcrma"; version="2.50.0"; sha256="1s2njjcvqm9siwga20f1z49lhk4cg13chzbk8sfdnvwi57yr6rwh"; depends=[affy affyio Biobase BiocInstaller Biostrings XVector]; };
+  gdsfmt = derive2 { name="gdsfmt"; version="1.14.1"; sha256="0d7yj5jm5kyw2jkbrzsyzzx1iw6lg4rbdyrvl7g62bjig6wvk0z1"; depends=[]; };
+  geNetClassifier = derive2 { name="geNetClassifier"; version="1.18.0"; sha256="14qvrjbcvkqp2azfqi33y7pwg4wlf1vabddbirinw73za5b4jf48"; depends=[Biobase e1071 EBarrays minet]; };
+  geecc = derive2 { name="geecc"; version="1.12.0"; sha256="1njvcwfdbpvmvvx8lcfw0baigjldr0v0rkqbk2rhb0h6wsiljfm2"; depends=[gplots hypergea MASS Rcpp]; };
+  genArise = derive2 { name="genArise"; version="1.54.0"; sha256="101dammhv29w78cm2xylln4s7rzcy6sqw44navzs260xccdipxab"; depends=[locfit tkrplot xtable]; };
+  genbankr = derive2 { name="genbankr"; version="1.6.0"; sha256="0yy9mjcd354g7gw73rx00q079xjaaka20imn3afmxv80gprhss5f"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; };
+  geneAttribution = derive2 { name="geneAttribution"; version="1.4.0"; sha256="11p8zqmmcfccl0fnyjm5kv8rbasamj6mra3bvk5jxsi4cqmbx9wx"; depends=[BiocGenerics GenomeInfoDb GenomicFeatures GenomicRanges IRanges org_Hs_eg_db rtracklayer]; };
+  geneClassifiers = derive2 { name="geneClassifiers"; version="1.2.0"; sha256="1canrqw0g6v32vy2p2xd4pz6kw5k2zyzgff5ii0p86w519dzg16v"; depends=[Biobase BiocGenerics]; };
+  geneRecommender = derive2 { name="geneRecommender"; version="1.50.0"; sha256="16cf2zkjffmdr2lhm7b4ckcw6p0kx40whw36m6y9510i8pmzy3y9"; depends=[Biobase]; };
+  geneRxCluster = derive2 { name="geneRxCluster"; version="1.14.0"; sha256="0r0lnhf19qw1d4p87632lz0rgx0d9q3cakpd6qh43b10fil7wjgp"; depends=[GenomicRanges IRanges]; };
+  geneXtendeR = derive2 { name="geneXtendeR"; version="1.4.0"; sha256="02a3aqn115l85cnvxy16ppri4hwir6mcp1av6s00nj66afxxnzmv"; depends=[AnnotationDbi data_table dplyr GO_db networkD3 org_Ag_eg_db org_Bt_eg_db org_Ce_eg_db org_Cf_eg_db org_Dm_eg_db org_Dr_eg_db org_Gg_eg_db org_Hs_eg_db org_Mm_eg_db org_Mmu_eg_db org_Pt_eg_db org_Rn_eg_db org_Sc_sgd_db org_Ss_eg_db org_Xl_eg_db RColorBrewer rtracklayer SnowballC tm wordcloud]; };
+  genefilter = derive2 { name="genefilter"; version="1.60.0"; sha256="173swlg6gj4kdllbqvyiw5dggbcxiwlwpqmllsv4dxzn7h25i3g7"; depends=[annotate AnnotationDbi Biobase S4Vectors survival]; };
+  genefu = derive2 { name="genefu"; version="2.10.0"; sha256="0pg9425z0inlbgvi15d050s6928xyqbxj36kk12z3dh3w2gwkycf"; depends=[AIMS amap biomaRt iC10 limma mclust survcomp]; };
+  geneplast = derive2 { name="geneplast"; version="1.4.0"; sha256="12ncf9rpnv1mwmdw4rbzzhggppcnzch764aiipy0jb21ix9xj61q"; depends=[ape snow]; };
+  geneplotter = derive2 { name="geneplotter"; version="1.56.0"; sha256="1z3g7frc1iviwrsv2dlm4nqvkc0685h4va0388yfxn102ln8wwma"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; };
+  genoCN = derive2 { name="genoCN"; version="1.30.0"; sha256="0m4sj2w0zra67d939knzriwda0nwphzspsmnl9jakl0kq8dvhjki"; depends=[]; };
+  genomation = derive2 { name="genomation"; version="1.11.3"; sha256="1d2g1v6xhrf3gm86pv8ln22df5g6v6k6i4i39v4j82zn4apany6v"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr Rcpp readr reshape2 Rsamtools rtracklayer RUnit S4Vectors seqPattern]; };
+  genomeIntervals = derive2 { name="genomeIntervals"; version="1.34.0"; sha256="11jlmfy8i245s3bnkcg49s8vrqfkrp5w2ibxdcixyckm7pzrv29r"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; };
+  genomes = derive2 { name="genomes"; version="3.8.0"; sha256="09ib88jqncywzc1rmjbj6p1i6nrrmbqxsn6jajdgqlgw8kpb490y"; depends=[curl readr]; };
+  genoset = derive2 { name="genoset"; version="1.34.0"; sha256="1cw6g8r3n33xlqmbjsfn6kkdzz19kh71ag529sjbk9wlxi69rrz0"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; };
+  genotypeeval = derive2 { name="genotypeeval"; version="1.10.0"; sha256="1pff2n1s350j6i7klsnwqlizkdvvfpyqqrvc7kq5gj7yh508dxy9"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer Rtsne VariantAnnotation]; };
+  genphen = derive2 { name="genphen"; version="1.6.0"; sha256="0m1g1hfhhbq3xjdr2fjf3wbng6d953kci965h298c168dv3864k6"; depends=[Biostrings e1071 effsize ggplot2 randomForest rjags]; };
+  gespeR = derive2 { name="gespeR"; version="1.10.0"; sha256="09xd080b08bfpqqbha4rxn4vmglv7c5asd4gibfjgjkasd78g40m"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; };
+  ggbio = derive2 { name="ggbio"; version="1.26.0"; sha256="1bqxfqy0hff87ax92z4lfbjz01ndrz7x8pzm6dlkdmi52p30krm9"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; };
+  ggcyto = derive2 { name="ggcyto"; version="1.6.1"; sha256="07rsg673hnrn1kf82nb59sxa925hjlb3qnjwlxvzlr2lzs958rcd"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra ncdfFlow plyr RColorBrewer scales]; };
+  ggtree = derive2 { name="ggtree"; version="1.10.4"; sha256="1ja6ynzhqyrf4gl0haf18h36zwrc0cj9969an94c23h4ksppw0m1"; depends=[ape ggplot2 magrittr rvcheck scales tidyr treeio]; };
+  girafe = derive2 { name="girafe"; version="1.30.0"; sha256="0k8fjn7d1hxwin0vywly7vc570048i7nckhyw9j4cind6fi6f75v"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; };
+  globalSeq = derive2 { name="globalSeq"; version="1.6.0"; sha256="19aws180r5gwxrz6xmfgic0mp8piki2qmzrxyy1f75866blk3r4f"; depends=[]; };
+  globaltest = derive2 { name="globaltest"; version="5.32.0"; sha256="1fk9yk6n3aqigcly5zsb0jnb6jmdbn3jgbp1wyv6sby124sr4hmr"; depends=[annotate AnnotationDbi Biobase survival]; };
+  gmapR = derive2 { name="gmapR"; version="1.20.0"; sha256="158ql56mbc1fw5nyzyw4cx4p5zyavwdm9117hy3ka3cxdpqaihbs"; depends=[Biobase BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; };
+  goProfiles = derive2 { name="goProfiles"; version="1.40.0"; sha256="0fdlqmyglgrpjcc24vp3mfz8yq6v79lnzvnkxj8rslnhddcf6lkq"; depends=[AnnotationDbi Biobase GO_db]; };
+  goSTAG = derive2 { name="goSTAG"; version="1.2.0"; sha256="07v5yqzsagygmz8kpkjmy8f2g8p7997mvkisi5jb1kd00hggzpw9"; depends=[AnnotationDbi biomaRt GO_db memoise]; };
+  goTools = derive2 { name="goTools"; version="1.52.0"; sha256="07wa206pk7wqawgs77009cjrd8xx6wvxzaakahcc1hh0hawhkk2r"; depends=[AnnotationDbi GO_db]; };
+  goseq = derive2 { name="goseq"; version="1.30.0"; sha256="01nnlh40v4zs8h26bf5ksl72a8826vl1lhdlfqawk304wr7k8kkf"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; };
+  gpls = derive2 { name="gpls"; version="1.50.0"; sha256="0sp3c783wxgg3g37yqq4901rdygl54ab2wqyjcgl2jrajaw44m3g"; depends=[]; };
+  gprege = derive2 { name="gprege"; version="1.22.0"; sha256="1k77dxm1mf761par04pfs27qwpy2s43a5z91z9r9zpjp9sb37nnf"; depends=[gptk]; };
+  graph = derive2 { name="graph"; version="1.56.0"; sha256="15aajjp8h2z14p80c8hyd4rrmr9vqsm7bvwb989jxjl4k6g52an1"; depends=[BiocGenerics]; };
+  graphite = derive2 { name="graphite"; version="1.24.1"; sha256="1ddqm2dlazczr8471171gznbpmm8cykxqn9c7vg3c3ysj7qmgxzx"; depends=[AnnotationDbi checkmate graph httr rappdirs]; };
+  groHMM = derive2 { name="groHMM"; version="1.12.0"; sha256="0cjkj0ypyc4dfi9s8dh88kh6q4xlpnc0wal7njg4b4gqj0l2hva7"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; };
+  gtrellis = derive2 { name="gtrellis"; version="1.11.1"; sha256="0mx4xvaipd0ydlnn4rlgbc47phlqgpihc55la6hv1fz2rs3k948v"; depends=[circlize GenomicRanges GetoptLong IRanges]; };
+  gwascat = derive2 { name="gwascat"; version="2.10.0"; sha256="0n5x5i5v6a8wpn5mxmlpkl34b4kyypmymiwww6g61zch7xqrgywi"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 gQTLstats graph Gviz Homo_sapiens IRanges Rsamtools rtracklayer S4Vectors snpStats SummarizedExperiment VariantAnnotation]; };
+  h5vc = derive2 { name="h5vc"; version="2.12.0"; sha256="181rsqda0bs7w2vz5dg3xzffla7yvlfkk7pfc0dzsjhw1b0yf3lx"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rsamtools S4Vectors]; };
+  hapFabia = derive2 { name="hapFabia"; version="1.20.0"; sha256="0mnc2mh3sqagvzhws1qr8vb57gp1r7n65wq6264vab2zcklhq7mh"; depends=[Biobase fabia]; };
+  heatmaps = derive2 { name="heatmaps"; version="1.2.0"; sha256="0kkfzxx1ccacy4gyv9nj151w137ca084rja8kakcnnvp3vcwn5z8"; depends=[BiocGenerics Biostrings EBImage GenomeInfoDb GenomicRanges IRanges KernSmooth Matrix plotrix RColorBrewer]; };
+  hiAnnotator = derive2 { name="hiAnnotator"; version="1.12.0"; sha256="0xa1x8xilh2x6xnnghz10j5r4q3ib5j28wkik7r79kpvzw7i55xc"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; };
+  hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.14.0"; sha256="1aa12m9r7zzcf91xpn8dfagr3cqp5wcp0gmkcczknavj8wgzzjmp"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator readxl rSFFreader sonicLength]; };
+  hicrep = derive2 { name="hicrep"; version="1.2.0"; sha256="0fza8zngc3cn8why5qfqscfsbj3nblbvxk4maj2ccsgpc0lrkb52"; depends=[]; };
+  hierGWAS = derive2 { name="hierGWAS"; version="1.8.0"; sha256="0kyxyv5vi7q6pfjxqbxi99f3p6g9fckjafgqkv3fg98sn2nb7zyh"; depends=[fastcluster fmsb glmnet]; };
+  hopach = derive2 { name="hopach"; version="2.38.0"; sha256="1v28bbz3bp7a5rpd02mxfxznhl4iwnn2bkh2kf25g64chg4jksfx"; depends=[Biobase BiocGenerics cluster]; };
+  hpar = derive2 { name="hpar"; version="1.20.0"; sha256="0s5v79mgxdx862v1jrdf5pdap81nz5vjx25ni8s3sl97ldckf6j8"; depends=[]; };
+  htSeqTools = derive2 { name="htSeqTools"; version="1.26.0"; sha256="1migbh30hh2bpa63iv1l0jqnz9ryvkx4apwyj0qzyd07b2p55qcz"; depends=[Biobase BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges MASS S4Vectors]; };
+  hyperdraw = derive2 { name="hyperdraw"; version="1.30.0"; sha256="00fi3687bnddjzx46y98i2pqm7dczn4icgsrbhhyhqkwg49v97hr"; depends=[graph hypergraph Rgraphviz]; };
+  hypergraph = derive2 { name="hypergraph"; version="1.50.0"; sha256="1c0f5fp6ybn88y1k408flqnndfjzfkig7vhbfxny1a43yyr0aib5"; depends=[graph]; };
+  iASeq = derive2 { name="iASeq"; version="1.22.0"; sha256="1kp787zv6h4wcp3naz0zbpw1z1m2vdg1xc9db31a9j2kbv7j9xd2"; depends=[]; };
+  iBBiG = derive2 { name="iBBiG"; version="1.22.0"; sha256="0vcwv1kf0mm21bx4ab6z1fn0gcgqaygrcrln0c96kpdz3zsx37mw"; depends=[ade4 biclust xtable]; };
+  iBMQ = derive2 { name="iBMQ"; version="1.18.0"; sha256="12gdj5ngagydkrb18hn8cms3bsvzdd3pkzrqdfxw16ppm1sy6mbd"; depends=[Biobase ggplot2]; };
+  iCARE = derive2 { name="iCARE"; version="1.6.0"; sha256="1cdw483lmqi605s1chfwzjk7kqxbky3pya4nyvmnggv4r4nc26qk"; depends=[]; };
+  iCOBRA = derive2 { name="iCOBRA"; version="1.6.0"; sha256="1y2h7d689wnvspvpkcih2z21r6yi70iicjyr3z91czqbr6vw5hsd"; depends=[dplyr DT ggplot2 limma reshape2 ROCR scales shiny shinyBS shinydashboard UpSetR]; };
+  iCheck = derive2 { name="iCheck"; version="1.8.0"; sha256="0z2hz21vd8j08ivnqq1w8n9qyn8h7sr56fl42npq6a6zyi7ab4zf"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d]; };
+  iChip = derive2 { name="iChip"; version="1.32.0"; sha256="02cpv5nkbyjnjxcbavdxy8m6fwkj03nqss49gp30mv1a2wnin7w0"; depends=[limma]; };
+  iClusterPlus = derive2 { name="iClusterPlus"; version="1.14.0"; sha256="06a9iavp24rkj64plzw505crg02hcd06g68drs8fgfabvdlb2jiy"; depends=[]; };
+  iGC = derive2 { name="iGC"; version="1.8.0"; sha256="125n780c9hx7wh5s1w21j3j71bzw1wa3gxapsnkcrn1vzh8agbmj"; depends=[data_table plyr]; };
+  iPAC = derive2 { name="iPAC"; version="1.22.0"; sha256="1x5npvg3k8jmj2xbx0p871iii51gwxqwk0waczd58ylvv023j1gr"; depends=[Biostrings gdata multtest scatterplot3d]; };
+  iSeq = derive2 { name="iSeq"; version="1.30.0"; sha256="0rypm4dhkkgd1j7vzbpcm2n6b6qcig483si46r16fwkn4hzwb11v"; depends=[]; };
+  ibh = derive2 { name="ibh"; version="1.26.0"; sha256="08f1a3f0m8900y3rgrq7v9ww6055bwpqc3liqpm0yf8fz3n83wnm"; depends=[simpIntLists]; };
+  ideal = derive2 { name="ideal"; version="1.2.0"; sha256="0fyh6y8k5ly19y2iysgvjsgagla0pfsihf3wwqzdcx0hp6f6ksz9"; depends=[AnnotationDbi BiocParallel d3heatmap DESeq2 dplyr DT GenomicRanges ggplot2 GO_db goseq GOstats gplots IHW IRanges knitr limma pcaExplorer pheatmap plyr rentrez rintrojs rmarkdown S4Vectors shiny shinyAce shinyBS shinydashboard stringr SummarizedExperiment topGO UpSetR]; };
+  idiogram = derive2 { name="idiogram"; version="1.54.0"; sha256="0y3wv1bqnaa624c4425qh8sz0sd57pvd16wgxb1i88ryb2q7gc6n"; depends=[annotate Biobase plotrix]; };
+  illuminaio = derive2 { name="illuminaio"; version="0.20.0"; sha256="02miyvard3y0d6qwbhq37bp4qypwph09k09630v6calr2q4jmzdh"; depends=[base64]; };
+  imageHTS = derive2 { name="imageHTS"; version="1.28.1"; sha256="18y5wfxfxp4lw1cxxps662gm4wsjs30di455zhpgw65l7y76r5jh"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; };
+  immunoClust = derive2 { name="immunoClust"; version="1.10.0"; sha256="1mxrg832ziys1wq3vbs6gqdbg0j85y3dnqkkffmz4srl6733z9c1"; depends=[flowCore lattice]; };
+  impute = derive2 { name="impute"; version="1.52.0"; sha256="0b8r4swvyx3cjcc2ky8yn0ncpzlbi1pgfsn3wpbjmhh7sqrffm2n"; depends=[]; };
+  intansv = derive2 { name="intansv"; version="1.18.0"; sha256="0y76a4bv8lyrlvcl8xz4268xw358wwxys2xqkgznk8l3hxrswbmv"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; };
+  interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.16.0"; sha256="01zxpbfx3nirvgw34v1wi62p4n6h2abqzfh89rcvlcdyw7vwgsrg"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; };
+  interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.16.0"; sha256="01yb945jqqimwjgriza6yy4dnp303cdirxrhl4hjyprfdlmnz5p5"; depends=[BiocGenerics shiny]; };
+  inveRsion = derive2 { name="inveRsion"; version="1.26.0"; sha256="12gfn4kxw5phb0vf1lx30vdp4lh4jxsdgy5ddbdgiv87cbzz6ldi"; depends=[haplo_stats]; };
+  iontree = derive2 { name="iontree"; version="1.24.0"; sha256="196b8pbnkyai4lxij17mhc8hikgdxcbdsqa04cck27fkplbiy6pq"; depends=[rJava RSQLite XML]; };
+  isobar = derive2 { name="isobar"; version="1.24.0"; sha256="1n27wks04fiqw3qm1nkjh533qk3fwnxivganl9x5c29jfmglzmk9"; depends=[Biobase biomaRt distr ggplot2 plyr]; };
+  isomiRs = derive2 { name="isomiRs"; version="1.6.0"; sha256="0bgcbwfx1clcq38fkvw9d60rz2zhww77nppb26mhzazmibhxyaa2"; depends=[Biobase BiocGenerics DESeq2 DiscriMiner dplyr gamlss gamlss_dist GenomicRanges GGally ggplot2 gplots gridExtra gtools IRanges lme4 RColorBrewer RcppEigen readr reshape S4Vectors SummarizedExperiment tidyr TMB]; };
+  iterClust = derive2 { name="iterClust"; version="1.0.0"; sha256="05fdil91cg2z90vfyahhkjj5mj4ajsrxaddl9qfdk86lx0q7migb"; depends=[Biobase cluster]; };
+  iterativeBMA = derive2 { name="iterativeBMA"; version="1.36.0"; sha256="0ck8fqici1916ardwp04grnclg6ydl731mcbd0xh1a1k7zzd0jbc"; depends=[Biobase BMA leaps]; };
+  iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.36.0"; sha256="096qnp9wisc4hnpgy37a4h1xb1f01kqc9rhrhfkp25wkf1yxgwmi"; depends=[BMA leaps survival]; };
+  ivygapSE = derive2 { name="ivygapSE"; version="1.0.0"; sha256="1y82cm0xmddhfz12iqqwpq9ifaml3r0yxs4c3cvp6k2c0wlhl173"; depends=[ggplot2 hwriter plotly S4Vectors shiny SummarizedExperiment survival survminer UpSetR]; };
+  joda = derive2 { name="joda"; version="1.26.0"; sha256="0qwfkq40zl16lngrmhw8lxx1qn5lh076nl6bydrzksvh1bjs78b6"; depends=[bgmm RBGL]; };
+  karyoploteR = derive2 { name="karyoploteR"; version="1.4.1"; sha256="0sq6iinign7ndw2wg1gfz7chbalyqycb8j0cai6zakaxjxav2dsc"; depends=[bezier biovizBase digest GenomeInfoDb GenomicRanges IRanges memoise regioneR Rsamtools rtracklayer S4Vectors]; };
+  kebabs = derive2 { name="kebabs"; version="1.12.0"; sha256="1mbymzrbwzzfd5ygf8fk89igv7x0damgskri39fj913aqifgkf42"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; };
+  keggorthology = derive2 { name="keggorthology"; version="2.30.0"; sha256="117s7b32nkv95adh2j91b87r90svhfb91ag28brsq3r333m2q8cn"; depends=[AnnotationDbi DBI graph hgu95av2_db]; };
+  kimod = derive2 { name="kimod"; version="1.6.0"; sha256="0mb9bv6bz7k27vs8rl26kh2zm8mvpkgzqhgc471lp4qz8f4fsbxc"; depends=[Biobase cluster]; };
+  lapmix = derive2 { name="lapmix"; version="1.44.0"; sha256="1b7daaqsq3bvb1wbhf99pk8kl4pm4kac7bnx211isr7ica34pxb5"; depends=[Biobase]; };
+  ldblock = derive2 { name="ldblock"; version="1.8.0"; sha256="18nfsixh6d2wfrb9laqsgly5w1frzihhak683k0p8fdf51h4aqba"; depends=[erma GenomeInfoDb GenomicFiles GO_db Homo_sapiens Matrix Rsamtools snpStats VariantAnnotation]; };
+  les = derive2 { name="les"; version="1.28.0"; sha256="0xy7ggc2b20i1c78mww84xvc0jhbinxn00nbfvnbw997vjqr7r79"; depends=[boot fdrtool gplots RColorBrewer]; };
+  lfa = derive2 { name="lfa"; version="1.8.0"; sha256="06w0032wwqm2cxid7brb6iq6bkhqc5x3a08wwyjbib6lnj5n7rvh"; depends=[corpcor]; };
+  limma = derive2 { name="limma"; version="3.34.8"; sha256="0bmxsgz2yll83sd3wbxsrsfd35468igb0d8lldym0d0lqfz906bw"; depends=[]; };
+  limmaGUI = derive2 { name="limmaGUI"; version="1.54.0"; sha256="1mhqxy4bfb38lp57wrm6jm57xbwhqz6z78cxjdjr8r9inysddjlp"; depends=[AnnotationDbi BiocInstaller gcrma limma R2HTML tkrplot xtable]; };
+  lmdme = derive2 { name="lmdme"; version="1.20.0"; sha256="1742ffw592cpp0bxd38g4k51h28iaax995lzmgxb3di6kj6h8an3"; depends=[limma pls stemHypoxia]; };
+  logicFS = derive2 { name="logicFS"; version="1.48.0"; sha256="1qkbc6xgmppicg30613ak0dy8fn1irq6n8kf2qvwd95y210zlcfv"; depends=[LogicReg mcbiopi]; };
+  logitT = derive2 { name="logitT"; version="1.36.0"; sha256="08jb55ccxbdcyrd497lgdhwkmj97r9rl21jc411l7fwckqz3pgwn"; depends=[affy]; };
+  lol = derive2 { name="lol"; version="1.26.0"; sha256="00wl4zw0qvinb2cy0cbcgrg0a9xr6s7b4y30ykd4666fmdk60dg3"; depends=[Matrix penalized]; };
+  lpNet = derive2 { name="lpNet"; version="2.10.0"; sha256="0r3xyhws10fq84y2rxv9v5wqbg05di4kkccv1l63idf38g33dvs1"; depends=[lpSolve nem]; };
+  lpsymphony = derive2 { name="lpsymphony"; version="1.7.1"; sha256="1qm131flq00dgvkdv6qz8xbh24qqadg8hn35q6ymsv6ql390xi06"; depends=[]; };
+  lumi = derive2 { name="lumi"; version="2.30.0"; sha256="1gy0137h5l2xmq3ahqsgg0lzczgbqck4qrqbgfnh8r0cb2r8vaaj"; depends=[affy annotate AnnotationDbi Biobase DBI GenomicFeatures GenomicRanges KernSmooth lattice MASS methylumi mgcv nleqslv preprocessCore RSQLite]; };
+  mAPKL = derive2 { name="mAPKL"; version="1.8.0"; sha256="08f6r31zlabsa7b8k5cnnwir7scjaix6mnnkgfs5h4gvb49vrbbm"; depends=[AnnotationDbi apcluster Biobase clusterSim e1071 igraph limma multtest parmigene reactome_db]; };
+  mBPCR = derive2 { name="mBPCR"; version="1.32.0"; sha256="0wvwfq4aqnhn0943v807sij3dasf93l3rhvcj7a65jpv4csd4vx2"; depends=[Biobase oligoClasses SNPchip]; };
+  mQTL_NMR = derive2 { name="mQTL.NMR"; version="1.12.0"; sha256="0iijl9afnynhh2pa9v1xj5b1cf0svjzlkvg3al8jrv0i28jibvi7"; depends=[GenABEL MASS outliers qtl]; };
+  maCorrPlot = derive2 { name="maCorrPlot"; version="1.48.0"; sha256="0jy6b57pi58795v1xhshaqrvpd27qarzv06r8il0d9085asc3v1r"; depends=[lattice]; };
+  maPredictDSC = derive2 { name="maPredictDSC"; version="1.16.0"; sha256="02wzz7s6cr0bligvxm37gwkbhzwfmaki27drbdaaiyssqmdb4bkq"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; };
+  maSigPro = derive2 { name="maSigPro"; version="1.50.0"; sha256="1d6rwfm42spfbqsbssbrc69rv2fj8gcxm4na9k66vij7dwi8nvd0"; depends=[Biobase MASS mclust venn]; };
+  maanova = derive2 { name="maanova"; version="1.48.0"; sha256="1vvjk6y8mp5h7l8yk4f1y48jx5k9fl9s12x2mgsbap306paw860q"; depends=[Biobase]; };
+  macat = derive2 { name="macat"; version="1.52.0"; sha256="168jw5bi1nbj2dfhipnvja7w0avmiw6vrvdany73d41fvigmagj5"; depends=[annotate Biobase]; };
+  made4 = derive2 { name="made4"; version="1.52.0"; sha256="1ns7f47l7ig2fm95l67ppym5gbkbr8lp18vx51pqwjg8r5rvj9sc"; depends=[ade4 gplots RColorBrewer scatterplot3d]; };
+  maftools = derive2 { name="maftools"; version="1.4.21"; sha256="0xcqfnp7qx9gr5nr8bd00cqa7b1d32nb14cj0ymhazsyd2ja9wv5"; depends=[Biostrings changepoint cometExactTest ComplexHeatmap cowplot data_table ggplot2 ggrepel gridExtra mclust NMF RColorBrewer rjson Rsamtools survival VariantAnnotation wordcloud]; };
+  maigesPack = derive2 { name="maigesPack"; version="1.42.0"; sha256="1c92kkr2rmfydckmbvri8g0lzz1v3hx93zpmb1pwrnlfpm01j95j"; depends=[convert graph limma marray]; };
+  makecdfenv = derive2 { name="makecdfenv"; version="1.54.0"; sha256="17fmzd12acdpq3vfnqrafmmg5jcmdgkf83mrqjpw92zah2w8490a"; depends=[affy affyio Biobase zlibbioc]; };
+  manta = derive2 { name="manta"; version="1.24.0"; sha256="060x5rdzkx882pa8x9w7j3sgj0clar6w35yblbcggq579r9jpx06"; depends=[caroline edgeR Hmisc]; };
+  mapscape = derive2 { name="mapscape"; version="1.2.0"; sha256="1nsr3n0vb0a9bzv2d9mginl5lcv8dvxpkv86ygn790bbkz35fq8x"; depends=[base64enc htmlwidgets jsonlite stringr]; };
+  marray = derive2 { name="marray"; version="1.56.0"; sha256="14c93i86yc7jn4ax8p4l0z6v9xisw1bv7gzb4a0gbxhxn7mddaic"; depends=[limma]; };
+  maskBAD = derive2 { name="maskBAD"; version="1.22.0"; sha256="0rg2r9yg3wviz0s5z5palmzbqb4cya4b0hd6w43fnwrfp46hqlp8"; depends=[affy gcrma]; };
+  massiR = derive2 { name="massiR"; version="1.14.0"; sha256="17bb7cm6wiwygxvp37gjiagxzali2023ikwxpqwghz6dn58nkqnl"; depends=[Biobase cluster diptest gplots]; };
+  matchBox = derive2 { name="matchBox"; version="1.20.0"; sha256="0m9swn284xk6y7vw2l8r5yjbq0b7x8n8ypd706fz9yc5ppg89h4j"; depends=[]; };
+  matter = derive2 { name="matter"; version="1.4.1"; sha256="1l8z30pzl0jssdkfmzwa5741mbn81sraw79jm38qv7h72mjsm891"; depends=[biglm BiocGenerics irlba]; };
+  mcaGUI = derive2 { name="mcaGUI"; version="1.26.0"; sha256="1ymdlc23jc0glfg15nlax71awkhqbaz5xv7pxnppf2m5sz73gfy0"; depends=[bpca foreign gWidgets gWidgetsRGtk2 lattice MASS OTUbase proto vegan]; };
+  mdgsa = derive2 { name="mdgsa"; version="1.10.0"; sha256="0xivpr1w41pzvfs4hjyc0vvmrbq0pbckai7j2vf4iq5sxxc4xyv3"; depends=[AnnotationDbi cluster DBI GO_db KEGG_db Matrix]; };
+  mdqc = derive2 { name="mdqc"; version="1.40.0"; sha256="0khrkhl4ksvls4qb0273zn9bc9dzd6234v1ly6vb2b2dslm8z9r0"; depends=[cluster MASS]; };
+  meshes = derive2 { name="meshes"; version="1.4.0"; sha256="1sz2hj16q0swz13vfaf63njg920xnx9ysdcbwfqlyik1i7s0c0h2"; depends=[AnnotationDbi DOSE GOSemSim MeSH_db rvcheck]; };
+  meshr = derive2 { name="meshr"; version="1.14.0"; sha256="00k37apfbfw1qxvh8wz1hg9gg32h8lib9yw0i9y1882krz61x5b6"; depends=[BiocGenerics Category cummeRbund fdrtool MeSH_Aca_eg_db MeSH_AOR_db MeSH_Bsu_168_eg_db MeSH_db MeSH_Hsa_eg_db MeSH_PCR_db MeSH_Syn_eg_db MeSHDbi org_Hs_eg_db S4Vectors]; };
+  messina = derive2 { name="messina"; version="1.14.0"; sha256="0483dvnq6ns4pfq8axcqgbd2n3b8i1b9063appyi5cqfa29s2sqm"; depends=[foreach ggplot2 plyr Rcpp survival]; };
+  metaArray = derive2 { name="metaArray"; version="1.56.0"; sha256="1n3hmf0gajfpg5gmjgdxnpb4x395wm03bpfvccgnkkwfv6qrzd7v"; depends=[Biobase MergeMaid]; };
+  metaCCA = derive2 { name="metaCCA"; version="1.6.0"; sha256="02a6562i2gddnk0izlrsdby7sx2s36axkdwy8c1z92s4n71m05q1"; depends=[]; };
+  metaMS = derive2 { name="metaMS"; version="1.14.0"; sha256="1lp0i0pf1xc0rhr61rh7qna0hbl0svqm5ysfgdl04i2ghglrrmqm"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; };
+  metaSeq = derive2 { name="metaSeq"; version="1.18.0"; sha256="1d8rr4nwbqxb7amdfrphw2ndyfhh74w20qgbzwlfc0wppwfwm5rr"; depends=[NOISeq Rcpp snow]; };
+  metabomxtr = derive2 { name="metabomxtr"; version="1.12.0"; sha256="0214idivldfmfym3hkj7qicmcjiymikag3ydqxp7fq8m7vb3vxdz"; depends=[Biobase BiocParallel Formula ggplot2 multtest optimx plyr]; };
+  metagene = derive2 { name="metagene"; version="2.10.1"; sha256="0h7i6jgpz8zh9l1w0w82333bnw7zrdn577s5ma2lcpfpybrr17zs"; depends=[BiocParallel data_table DBChIP EnsDb_Hsapiens_v86 ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges magrittr matrixStats muStat purrr R6 Rsamtools rtracklayer stringr]; };
+  metagenomeFeatures = derive2 { name="metagenomeFeatures"; version="1.10.0"; sha256="1c8l4dvw9vaw2kcc11a8six5rcayc2girzzz88lq4a2ly5f225kv"; depends=[ape Biobase Biostrings dbplyr dplyr lattice lazyeval magrittr metagenomeSeq purrr RSQLite ShortRead stringr]; };
+  metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.20.1"; sha256="15ib66lir0smsk1zq41g5nf6r93wvg5a3bai44gg7f1cgc5xf4xp"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer]; };
+  metahdep = derive2 { name="metahdep"; version="1.36.0"; sha256="10v5zx3xn9xr18qwb2hy3566xzk4a38084xvbs7cfh9aypq58zfj"; depends=[]; };
+  metaseqR = derive2 { name="metaseqR"; version="1.18.0"; sha256="0g707gimklmnhmgicvslmbzam67fmh3h9h4nsqv41pc5kp74n6ql"; depends=[baySeq biomaRt brew corrplot DESeq EDASeq edgeR gplots limma log4r NBPSeq NOISeq qvalue rjson vsn]; };
+  metavizr = derive2 { name="metavizr"; version="1.2.1"; sha256="114nr1nb8wniqb8gq0v6ah9vimbf4k1iy0k2chr0rz6jh7b4larc"; depends=[Biobase data_table digest epivizr epivizrData epivizrServer epivizrStandalone GenomeInfoDb httr metagenomeSeq phyloseq vegan]; };
+  methInheritSim = derive2 { name="methInheritSim"; version="1.0.0"; sha256="0ji9yz4x8yk9d156ssfcf4mv0gkrbrfh37w1saywap4680ap47r3"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges methylKit msm S4Vectors]; };
+  methVisual = derive2 { name="methVisual"; version="1.30.0"; sha256="0xdzmvhs4hjj12w6lfwa7vcikdgc08krqxdak1959zclw4mp4jq6"; depends=[Biostrings ca gridBase gsubfn IRanges plotrix sqldf]; };
+  methimpute = derive2 { name="methimpute"; version="1.0.0"; sha256="0fgdd7dqs2sjvm3g0ivlnb61d8ccc32zvwbjgaw2raz6g4dm4c53"; depends=[Biostrings GenomeInfoDb GenomicRanges ggplot2 IRanges minpack_lm Rcpp reshape2]; };
+  methyAnalysis = derive2 { name="methyAnalysis"; version="1.20.0"; sha256="0cmgv74pc4gj1qrsk2a7hx45vssf73hcc80zpqlhwzy3yg103ql3"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges genoset Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer SummarizedExperiment VariantAnnotation]; };
+  methylInheritance = derive2 { name="methylInheritance"; version="1.2.0"; sha256="05i7z2b0xyszfadkk0qcgvhx6fxlfv7dcqj6ix0y0349fgsd2phz"; depends=[BiocParallel GenomicRanges ggplot2 gridExtra IRanges methylKit rebus S4Vectors]; };
+  methylKit = derive2 { name="methylKit"; version="1.4.1"; sha256="1k0nfn9318sgwm4z963bhnbp4c3zv85v3f9886vc5hgaisr0yvai"; depends=[data_table emdbook fastseg GenomeInfoDb GenomicRanges gtools IRanges KernSmooth limma mclust qvalue R_utils Rcpp Rhtslib Rsamtools rtracklayer S4Vectors zlibbioc]; };
+  methylMnM = derive2 { name="methylMnM"; version="1.16.0"; sha256="0lq1kgliyy1q48csgc9bprapy9va5kpqlpm87wq4d967a5q0ja5h"; depends=[edgeR statmod]; };
+  methylPipe = derive2 { name="methylPipe"; version="1.12.0"; sha256="076z90fmzkp9j4xdlr2amif8kkdmmkh0jcvs384207if09w9i4v9"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; };
+  methylumi = derive2 { name="methylumi"; version="2.24.1"; sha256="05hwixscc79hbjx7g94nkrwk26zjf156dlvhgfjr890zn4mj709c"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; };
+  methyvim = derive2 { name="methyvim"; version="1.0.0"; sha256="1hz6c4bdgslxrbkr0q9fx6ffrrilxcanm8f5alady5qndm4vmiw1"; depends=[BiocGenerics BiocParallel bumphunter cluster doFuture dplyr future GenomeInfoDb ggplot2 gridExtra gtools IRanges limma magrittr minfi SummarizedExperiment superheat tmle wesanderson]; };
+  mfa = derive2 { name="mfa"; version="1.0.0"; sha256="17mwf4p4cr4xz1g32p4j0jaxvzfvjzilyrl9nv686nr7cplgkbgp"; depends=[Biobase coda dplyr ggmcmc ggplot2 magrittr MCMCglmm MCMCpack Rcpp tibble]; };
+  mgsa = derive2 { name="mgsa"; version="1.26.0"; sha256="087hmvrrd5x1s6198g9q8nwrpd36zywg39dl4l6x8qkr7zgjzakb"; depends=[gplots]; };
+  miRBaseConverter = derive2 { name="miRBaseConverter"; version="1.0.0"; sha256="0nx31s6lq6270qj0lx0f8f14959vwhfcyzs1n9h3rs0jwagr41kx"; depends=[]; };
+  miRLAB = derive2 { name="miRLAB"; version="1.8.0"; sha256="0fj96h1xan56sc71ycc4c5b2q7chncsknmdlj318lz95mydbiwdv"; depends=[energy entropy glmnet gplots Hmisc httr impute limma pcalg RCurl Roleswitch stringr]; };
+  miRNAmeConverter = derive2 { name="miRNAmeConverter"; version="1.6.0"; sha256="1chsigqmfxajd8gll2rq7ccbrsgp9k0cddn4ds4zkiiz6a79iiww"; depends=[AnnotationDbi DBI miRBaseVersions_db]; };
+  miRNApath = derive2 { name="miRNApath"; version="1.38.0"; sha256="11137kg0a1l8z2aiz6qisg1gq21rpgzhwr4z8dg0bkh9137jwnx8"; depends=[]; };
+  miRNAtap = derive2 { name="miRNAtap"; version="1.12.0"; sha256="0lq3kvs6ri9pdjxwl2hyvdymcnx33avgw7mfg1h6q7dfx0icwiw2"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; };
+  miRcomp = derive2 { name="miRcomp"; version="1.8.0"; sha256="1fxmkn5vp0szjjb0cl8vmaz411x7m10krs4j8dkvlnfhzlqhar96"; depends=[Biobase KernSmooth miRcompData]; };
+  miRmine = derive2 { name="miRmine"; version="1.0.0"; sha256="09sxjj2pj4s03dqqphywyhvmk3q2gvdn2nph5nplqwny6q9m2i1v"; depends=[SummarizedExperiment]; };
+  miRsponge = derive2 { name="miRsponge"; version="1.2.0"; sha256="0c3213hpf78ynqlaj12p0j9172gvlrhrx4rn4kmr6g1ja9xk80k7"; depends=[clusterProfiler corpcor DOSE igraph ProNet ReactomePA survival varhandle]; };
+  microRNA = derive2 { name="microRNA"; version="1.36.0"; sha256="0mc81fy9y3jgc3ll074ksmw72d8yp29pyaankn3na24r96lfcxnj"; depends=[Biostrings]; };
+  microbiome = derive2 { name="microbiome"; version="1.0.0"; sha256="13hfia6y1bnzx68gkbb9jhpg9m4mbjn6js69zmhg68c3s7l7s1lk"; depends=[dplyr ggplot2 phyloseq reshape2 tidyr vegan]; };
+  mimager = derive2 { name="mimager"; version="1.2.0"; sha256="14r0h676nhsbg175hj7jmkp1ny5wfhykmy2jm2s9qgdsfrgacgv2"; depends=[affy affyPLM Biobase BiocGenerics DBI gtable oligo oligoClasses preprocessCore S4Vectors scales]; };
+  minet = derive2 { name="minet"; version="3.36.0"; sha256="1ig9kwh7fvhpglxkda9l5nkaz3rmhl6bc006h6mrz9hl130vmnn8"; depends=[infotheo]; };
+  minfi = derive2 { name="minfi"; version="1.24.0"; sha256="1pk5savz9ziarx2iajqnck4vjmh3bnrmzy5m06vx3vmcww46ddi7"; depends=[beanplot Biobase BiocGenerics Biostrings bumphunter data_table genefilter GenomeInfoDb GenomicRanges GEOquery illuminaio IRanges lattice limma MASS matrixStats mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; };
+  mirIntegrator = derive2 { name="mirIntegrator"; version="1.8.0"; sha256="05z8yq7jl3s3i3p9b6p7b16hrshg69gmfs0f67xq0svfb3fqpm85"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; };
+  missMethyl = derive2 { name="missMethyl"; version="1.12.0"; sha256="1fvpny7x56l55zhgabm6al2i2n0hix7fp7d01bzirsn7chxpwny3"; depends=[AnnotationDbi BiasedUrn GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest limma methylumi minfi org_Hs_eg_db ruv statmod stringr]; };
+  mitoODE = derive2 { name="mitoODE"; version="1.16.0"; sha256="11kyihynbl3kcrngv8dhiqn3ghpkvv0xi35pf8np2p41zdhbrpyv"; depends=[KernSmooth MASS minpack_lm mitoODEdata]; };
+  mogsa = derive2 { name="mogsa"; version="1.12.2"; sha256="0a29q9jak4vr05ngh2pcsfifa9i6p086acjk2qrzwnc3lcfm00bm"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; };
+  monocle = derive2 { name="monocle"; version="2.6.1"; sha256="1s3g488jyb0lbdsx4jkpzfl47kpcrnmn2n3bi85if1jmgvlxahvv"; depends=[Biobase BiocGenerics biocViews cluster combinat DDRTree densityClust dplyr fastICA ggplot2 HSMMSingleCell igraph irlba limma MASS Matrix matrixStats pheatmap plyr proxy qlcMatrix RANN Rcpp reshape2 Rtsne slam stringr tibble VGAM viridis]; };
+  mosaics = derive2 { name="mosaics"; version="2.16.0"; sha256="08q48zakyfydrj8vix3a5w0j4ix5h1hpqccv0jxgj55gpdc062kj"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; };
+  motifRG = derive2 { name="motifRG"; version="1.22.0"; sha256="193zl2rlzwxv9p9q5i7rilj3w05ndqfyp9bdpvagp5s5cin4hf44"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 IRanges seqLogo XVector]; };
+  motifStack = derive2 { name="motifStack"; version="1.22.2"; sha256="05kbp0j0hqpx22fn47r4fcws3hgv5j0496n5srwz1qdlm10igs23"; depends=[ade4 Biostrings grImport htmlwidgets MotIV scales XML]; };
+  motifbreakR = derive2 { name="motifbreakR"; version="1.8.0"; sha256="1jfff6jgvrylhnpyc5zq1fah33xq8vf7hypv22vg7js6m8bmcx5j"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges grImport Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr TFMPvalue VariantAnnotation]; };
+  motifcounter = derive2 { name="motifcounter"; version="1.2.1"; sha256="1k47yca1w59w0k7w4cxahhq4r2jyb8vflpzmrl7wnypb4lf9mbc0"; depends=[Biostrings]; };
+  motifmatchr = derive2 { name="motifmatchr"; version="1.0.1"; sha256="0a7hg307f274n8vxknl0381xpvgphsim07pk7dnh0af3a63lh2ji"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment TFBSTools]; };
+  mpra = derive2 { name="mpra"; version="1.0.0"; sha256="11lb626w779hawfl06n85mfm0ld8p46ns6s67fkxcxggr4rbkh82"; depends=[BiocGenerics limma S4Vectors scales statmod SummarizedExperiment]; };
+  msPurity = derive2 { name="msPurity"; version="1.4.0"; sha256="105z60rdflpz0j9ckrwc7dpywh9v3lqwbs4adwlrvziz87ah29al"; depends=[DBI doSNOW fastcluster foreach ggplot2 mzR plyr Rcpp reshape2 RSQLite stringr]; };
+  msa = derive2 { name="msa"; version="1.10.0"; sha256="15czlzssrxsgjckxy6ckphfcyj2q12iq5q86238xj16wfqphax45"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; };
+  msgbsR = derive2 { name="msgbsR"; version="1.2.0"; sha256="0gnv5gk9as3gn85gwgs8agrvzk5948wiwa685xjpwz359vbqnxrs"; depends=[BSgenome easyRNASeq edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr R_utils Rsamtools S4Vectors SummarizedExperiment]; };
+  msmsEDA = derive2 { name="msmsEDA"; version="1.16.0"; sha256="1d7h4q8dbiv6p7sfslfmhjhrfr3fkjwl82gvb1179wb8qm3qkgwc"; depends=[gplots MASS MSnbase RColorBrewer]; };
+  msmsTests = derive2 { name="msmsTests"; version="1.16.0"; sha256="0gy8y6ca57j7gqp69r008802gfpkay56k4aigy04xij1jd17abx7"; depends=[edgeR msmsEDA MSnbase qvalue]; };
+  multiClust = derive2 { name="multiClust"; version="1.8.2"; sha256="01kidj4ggv26981b411vf4lsa61pghb4d56j6nr88r87rja9mn2l"; depends=[amap cluster ctc dendextend mclust survival]; };
+  multiMiR = derive2 { name="multiMiR"; version="1.1.0"; sha256="0zl1m62j9gdb11n4xp2piw36ildjvs5z2gw7f3sdjbkdl6jvsgwz"; depends=[AnnotationDbi BiocGenerics dplyr purrr RCurl tibble XML]; };
+  multiOmicsViz = derive2 { name="multiOmicsViz"; version="1.2.0"; sha256="1zqlgz2iprwqnib9hsxynygnvwb0mqn4zbgbqrj7nsxsd5qsad51"; depends=[doParallel foreach SummarizedExperiment]; };
+  multiscan = derive2 { name="multiscan"; version="1.38.0"; sha256="07fb0a7kn8bjvq9cx4dvdjrf92830vwpz5n31mgk58aw3vg3mz66"; depends=[Biobase]; };
+  multtest = derive2 { name="multtest"; version="2.34.0"; sha256="0n11rd49xl2vn3ldmfips7d3yb70l8npjcqsxyswr9ypjhgzkv9j"; depends=[Biobase BiocGenerics MASS survival]; };
+  muscle = derive2 { name="muscle"; version="3.20.0"; sha256="16kawdvm08hag2kghdn438z0ysby67p989v3xlcf9r8f62isw6b7"; depends=[Biostrings]; };
+  mvGST = derive2 { name="mvGST"; version="1.12.0"; sha256="12fm1xgini0l5x2xbp9qkxigdvii7yjdwww420bn7ymz4z97865c"; depends=[annotate AnnotationDbi GO_db GOstats gProfileR graph Rgraphviz stringr topGO]; };
+  mygene = derive2 { name="mygene"; version="1.14.0"; sha256="0qqkpsqk99575rc49kj7s5yl22jb96gmk47i5lm700qi4v9fyim4"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf]; };
+  myvariant = derive2 { name="myvariant"; version="1.8.0"; sha256="1r4hqy5jz4xqswj3pfzxmncjapjmcksbx428f7lfncj844198g1q"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; };
+  mzID = derive2 { name="mzID"; version="1.16.0"; sha256="0yk70dka56zd8w62f03ggx3mandj91gfa767h9ajj0sd3mjmfqb9"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; };
+  mzR = derive2 { name="mzR"; version="2.12.0"; sha256="1x3gp30sfxz2v3k3swih9kff9b2rvk7hzhnlkp6ywlnn2wgb0q8c"; depends=[Biobase BiocGenerics ProtGenerics Rcpp zlibbioc]; };
+  ncdfFlow = derive2 { name="ncdfFlow"; version="2.24.0"; sha256="1rvqlfzdbqz7a035c2d0rfziail71pvyla6fi3mv1xzrm2vpw0b8"; depends=[BH Biobase BiocGenerics flowCore flowViz Rcpp RcppArmadillo Rhdf5lib zlibbioc]; };
+  ndexr = derive2 { name="ndexr"; version="1.0.3"; sha256="05wnjya61w0mbskrfs9k5w04pr3hcf4c8w15y85z7j1vxjhpgwjq"; depends=[httr igraph jsonlite plyr tidyr]; };
+  nem = derive2 { name="nem"; version="2.52.0"; sha256="0114b8nzv07gii87rdcvia6n7jn203f5whx6x6x54ijxq8m1fkk8"; depends=[boot e1071 graph limma plotrix RBGL RColorBrewer Rgraphviz statmod]; };
+  netReg = derive2 { name="netReg"; version="1.2.0"; sha256="1cmh66m5zp1awrg79f8d09b48shq8hyjvkz6mfxrnvqbcj32v8ph"; depends=[Rcpp RcppArmadillo]; };
+  netbenchmark = derive2 { name="netbenchmark"; version="1.10.0"; sha256="173jmvslg8vj078psnvk6s4sns8n9zv2z8hkq6iq64pavmn9cf91"; depends=[c3net corpcor fdrtool GeneNet grndata Matrix minet PCIT pracma randomForest Rcpp]; };
+  netbiov = derive2 { name="netbiov"; version="1.12.0"; sha256="1xxqrpjsn6pc097d4c1389gn80404pxjxzsm5zz4bcfk30lr5w3l"; depends=[igraph]; };
+  nethet = derive2 { name="nethet"; version="1.10.0"; sha256="1ssmjgxmsyzwhsnpq263q3vmspg74xzin6bny3y9icvs8x893mbp"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network parcor]; };
+  netprioR = derive2 { name="netprioR"; version="1.4.0"; sha256="1cppds5a3d8fs4wbfj2asc24ksxk27718gwyyy5hgigy7zx9z4h3"; depends=[doParallel dplyr foreach ggplot2 gridExtra Matrix pROC sparseMVN]; };
+  netresponse = derive2 { name="netresponse"; version="1.38.0"; sha256="131xbpkaglnspa2zxq49qwn2nnphlh1ly5s5hx8p9a0da2ccspas"; depends=[dmt ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz]; };
+  networkBMA = derive2 { name="networkBMA"; version="2.18.0"; sha256="04rkhi1iiwygilzmfbwsd2acg7cvpmdrli6qb0a0wi1g0yx7k95a"; depends=[BH BMA leaps Rcpp RcppArmadillo RcppEigen]; };
+  nnNorm = derive2 { name="nnNorm"; version="2.42.0"; sha256="0dm1h989vkimcf51glqjc1lqiaq28cgym82m99afcisinldnwlhr"; depends=[marray nnet]; };
+  nondetects = derive2 { name="nondetects"; version="2.8.0"; sha256="0x06jz8gw97nks84y7pkgqm8p1jqdfgpxcrk48q8pdnc2flaq4a0"; depends=[Biobase HTqPCR limma mvtnorm]; };
+  normalize450K = derive2 { name="normalize450K"; version="1.6.0"; sha256="0cdcl7jp9hhk2dkwhyrzxg8f768r3llfi3vy5a5ppann9016nxp6"; depends=[Biobase illuminaio quadprog]; };
+  normr = derive2 { name="normr"; version="1.4.0"; sha256="0g1f623f1rzsp7ywm2434gcvws4biziav76iliir5g10zafgw6vc"; depends=[bamsignals GenomeInfoDb GenomicRanges IRanges qvalue Rcpp rtracklayer]; };
+  npGSEA = derive2 { name="npGSEA"; version="1.14.0"; sha256="0v99nirx9j4dpfsb1ihyhj7iwy7hkxda6bf0l3326mi13xy2jirb"; depends=[Biobase BiocGenerics GSEABase]; };
+  nucleR = derive2 { name="nucleR"; version="2.10.0"; sha256="047ny4dm6x45hsagznwibrq6i3rycvvwmxl8hgh1c2phl87njpbi"; depends=[Biobase BiocGenerics GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; };
+  nucleoSim = derive2 { name="nucleoSim"; version="1.6.0"; sha256="0gyxb4ydhx3igxddp4jh9qg9787bv1lk8dyahq7y96jv4qmmw65k"; depends=[IRanges S4Vectors]; };
+  nudge = derive2 { name="nudge"; version="1.44.0"; sha256="1yp2x6hdn6vhvy922f4d74zyw2n5shrhlpxiig50hwd8dar2nn5f"; depends=[]; };
+  occugene = derive2 { name="occugene"; version="1.38.0"; sha256="1lwf3kv171lapk4lk8v33996rjb54q3w4dbdn1b64vlcgw5586ip"; depends=[]; };
+  odseq = derive2 { name="odseq"; version="1.6.0"; sha256="15qlapq5vp3s99888kmmabvkl0vx507qkkh7v9a9zd7algz5shwj"; depends=[kebabs mclust msa]; };
+  oligo = derive2 { name="oligo"; version="1.42.0"; sha256="1rjnsr3h4bi3bjv580iv2rfs9c062qyilm9xxkk3rx2l0ylih05y"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; };
+  oligoClasses = derive2 { name="oligoClasses"; version="1.40.0"; sha256="0xly40mz55z0lis2b1zh3nhyf5qw2d8qlrm6n51hz49y0bqjssr9"; depends=[affyio Biobase BiocGenerics BiocInstaller Biostrings DBI ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; };
+  omicRexposome = derive2 { name="omicRexposome"; version="1.0.1"; sha256="13bjic4msqpjh0llqa0fs4nzmskf0h97mi614n458c3109bscdjk"; depends=[Biobase ggplot2 ggrepel gridExtra isva limma MultiDataSet omicade4 PMA rexposome SmartSVA stringr SummarizedExperiment sva]; };
+  omicade4 = derive2 { name="omicade4"; version="1.18.0"; sha256="0f83c907lbqw0idzrxl5a7hb4r9ginrj4798ymfkgc2m6a5x1w46"; depends=[ade4 made4]; };
+  oncomix = derive2 { name="oncomix"; version="1.0.0"; sha256="015sgiagij3pzxvcqygbby1rsl8ximmwpd09lb50w95xa1ks466z"; depends=[ggplot2 ggrepel mclust RColorBrewer SummarizedExperiment]; };
+  oneChannelGUI = derive2 { name="oneChannelGUI"; version="1.41.0"; sha256="0hx5s3y9zgx41p516q9w09crkihyn8hckwmf8jzxj7llrplc3dm1"; depends=[affylmGUI Biobase Biostrings chimera IRanges Rsamtools siggenes tkrplot tkWidgets]; };
+  oneSENSE = derive2 { name="oneSENSE"; version="1.0.0"; sha256="0jq4affxz5jr6pn01cz0cwbl1f930v63pzswz787m7lv7bvvbnl4"; depends=[flowCore gplots plotly Rtsne scatterplot3d shiny shinyFiles webshot]; };
+  ontoCAT = derive2 { name="ontoCAT"; version="1.29.0"; sha256="057sbc0s08i22gjg886ngz0k59r4v29ssh11qj0wyv4n5g3zs0hg"; depends=[rJava]; };
+  ontoProc = derive2 { name="ontoProc"; version="1.0.0"; sha256="0la7lcynmdgavvzdz7b5g726pm4205r8194dnsmnhc5h3lryr36k"; depends=[AnnotationDbi Biobase ontologyIndex S4Vectors shiny]; };
+  openCyto = derive2 { name="openCyto"; version="1.16.1"; sha256="1qzx0qq1d2hi5whqi0kbg8xmjbglv6j2fli3wcx932g66lxwg3sv"; depends=[Biobase clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; };
+  openPrimeR = derive2 { name="openPrimeR"; version="1.0.0"; sha256="0x4h7lcanzclcxnbrj2hii5mpv2b7rm5izm9p51drqylr69gvns2"; depends=[ape BiocGenerics Biostrings DECIPHER digest distr distrEx dplyr fitdistrplus foreach GenomicRanges ggplot2 Hmisc IRanges lpSolveAPI magrittr openxlsx plyr RColorBrewer reshape2 S4Vectors scales seqinr stringdist stringr uniqtag XML]; };
+  openPrimeRui = derive2 { name="openPrimeRui"; version="1.0.0"; sha256="1mchbalmq6mbxp9mdrmndz3pja7j1ffx5xglnzglfdqm2004gdlf"; depends=[DT openPrimeR rmarkdown shiny shinyBS shinyjs]; };
+  oposSOM = derive2 { name="oposSOM"; version="1.16.0"; sha256="1855wrszaxwc8rghhn1hgj6hrp5mxsyffbs9ccjckq5jl3z7z1mj"; depends=[ape arules Biobase biomaRt fastICA fdrtool igraph pixmap scatterplot3d som tsne]; };
+  oppar = derive2 { name="oppar"; version="1.6.0"; sha256="0h4wfgjq8xm5f6bcaj5vxy686ymr42r3ig9zw93ayycpfl81p275"; depends=[Biobase GSEABase GSVA]; };
+  pRoloc = derive2 { name="pRoloc"; version="1.18.0"; sha256="0syqcpfwm7bxk7jzr988zx91m7ny4aiy9rc286xakd4snl4vafc0"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class dendextend e1071 FNN ggplot2 gtools hexbin kernlab knitr lattice MASS mclust MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo Rtsne sampling scales]; };
+  pRolocGUI = derive2 { name="pRolocGUI"; version="1.12.0"; sha256="0d4gv7nkwh8wbgdx37gwg4c29704q3z811cwwxdpx3gdgsa1iizw"; depends=[Biobase dplyr DT ggplot2 MSnbase pRoloc scales shiny]; };
+  paircompviz = derive2 { name="paircompviz"; version="1.16.0"; sha256="1yw27k417zcbx2dji8hjw6g1qcp8762k2c9j7gddfck7k7qjf1jc"; depends=[Rgraphviz]; };
+  pandaR = derive2 { name="pandaR"; version="1.10.0"; sha256="0x7mandjc2dk020pq8733wshzszrav3i29iq74pnp13dfrz4zb92"; depends=[Biobase BiocGenerics ggplot2 hexbin igraph matrixStats plyr reshape RUnit]; };
+  panelcn_mops = derive2 { name="panelcn.mops"; version="1.0.0"; sha256="0wg88axsgmrsihib7yc1xgm45q5d9dgikqvqncn7fx59i81f6l6c"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; };
+  panp = derive2 { name="panp"; version="1.48.0"; sha256="1pfajph1wzwww2w9djpkb8rwszjcb0hink81fy27js3ppzm3cc7l"; depends=[affy Biobase]; };
+  parglms = derive2 { name="parglms"; version="1.10.0"; sha256="11gxwv274g6fyz3ckl6l7wrzx229zgdparlplb7niz63cqqhggn5"; depends=[BatchJobs BiocGenerics doParallel foreach]; };
+  parody = derive2 { name="parody"; version="1.36.0"; sha256="073prpjv5hf2y0864gzjj4c0hlncw81nw877f0yykskpq72df38i"; depends=[]; };
+  pathRender = derive2 { name="pathRender"; version="1.46.0"; sha256="11q5nbscf1zcpw437vp12vx7n80dm3m3nymc7r79hbz3idpn16bp"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; };
+  pathVar = derive2 { name="pathVar"; version="1.8.0"; sha256="1l8544smgrfqavpv1xjwxj2mv8m8jgp50basylkamg1q1098l1h6"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; };
+  pathifier = derive2 { name="pathifier"; version="1.16.0"; sha256="0sr8fnp5i2f38cnxsa3lag60ibjzp169yml55jay2gc0br6bsjm7"; depends=[princurve R_oo]; };
+  pathprint = derive2 { name="pathprint"; version="1.6.0"; sha256="0f2icjqxw4q3zgkr71836xhvad488w21xjwy62c2cnh9zbmm47wj"; depends=[]; };
+  pathview = derive2 { name="pathview"; version="1.18.2"; sha256="1jspjwf919gifwqx29wgsjfyrdwp6a1i7ip444gcqz9i7crpfwvz"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; };
+  paxtoolsr = derive2 { name="paxtoolsr"; version="1.12.0"; sha256="09djd4ix6abljqv70k89p6slghi2y6phyy679f2dsyqn8cmhlp8s"; depends=[data_table httr igraph jsonlite plyr R_utils rJava rjson XML]; };
+  pbcmc = derive2 { name="pbcmc"; version="1.6.0"; sha256="123bijvnq29b9sc2wa9a887wdk8223bn26bv64pmrv97qnkvfarg"; depends=[Biobase BiocGenerics BiocParallel cowplot genefu ggplot2 gridExtra limma reshape2]; };
+  pcaExplorer = derive2 { name="pcaExplorer"; version="2.4.0"; sha256="1z8nahkz13v86k1c89nypxjxwawds1b4r7inbzns20g61caxxxnc"; depends=[AnnotationDbi biomaRt d3heatmap DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats IRanges knitr limma NMF pheatmap plyr rmarkdown S4Vectors scales shiny shinyAce shinyBS shinydashboard SummarizedExperiment threejs tidyr topGO]; };
+  pcaGoPromoter = derive2 { name="pcaGoPromoter"; version="1.22.0"; sha256="0371ns6702nk5s3pj59z04i2sjf24sj0wm3m4rj67q4p5v7v1ksz"; depends=[AnnotationDbi Biostrings ellipse]; };
+  pcaMethods = derive2 { name="pcaMethods"; version="1.70.0"; sha256="0ii235g0x0492kh8cfrf28ni0b6vd6fh7kizkqmczzqggd6b1bk8"; depends=[Biobase BiocGenerics MASS Rcpp]; };
+  pcot2 = derive2 { name="pcot2"; version="1.46.0"; sha256="1pymhr9ypp5g27bbnayrz4ks8rg5j634bf4l596m2b6c4q9d9rc5"; depends=[amap Biobase]; };
+  pcxn = derive2 { name="pcxn"; version="1.0.0"; sha256="105mzgy6bcwmk1nsnlr44bik8pazyjc7zcqn56732g1dj5na5v5w"; depends=[pcxnData pheatmap]; };
+  pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.42.0"; sha256="0cs47qzkpphixcwn3fl9pfrw1qans8y51y8lb9phikh4s8cdq061"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; };
+  pdmclass = derive2 { name="pdmclass"; version="1.47.0"; sha256="1grc1fyn8yhwixi7638bsyb3zc6zhzzrbfh4hcpqk6gf653dls63"; depends=[Biobase fibroEset mda]; };
+  pepStat = derive2 { name="pepStat"; version="1.12.0"; sha256="0bnak90zfycd5a9qkz4lhwk4h61pr0pwn3hzaksxcv6c025h0mwm"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; };
+  pepXMLTab = derive2 { name="pepXMLTab"; version="1.12.0"; sha256="062bgkdqmp1hqibdar3x3lq1vdkpds9xzadq6fivj0iyx4lwpsl0"; depends=[XML]; };
+  pgca = derive2 { name="pgca"; version="1.2.0"; sha256="16v1fdw3abbxh5jmrsam8mhhamhjgkwmx7i16d2kxsybxp3k4zrb"; depends=[]; };
+  phenoDist = derive2 { name="phenoDist"; version="1.26.0"; sha256="0mhk918cbk6zg6acs7fzvpy2fkj9gdj0acx5mfzvvypahlfbf1za"; depends=[e1071 imageHTS]; };
+  phenoTest = derive2 { name="phenoTest"; version="1.26.0"; sha256="0wl1b9g5wlqzjll1kvgl29fl1qg6dqj9qwz5wfdhkvpxh43z4pyb"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach HTSanalyzeR limma mgcv SNPchip survival xtable]; };
+  phenopath = derive2 { name="phenopath"; version="1.2.0"; sha256="150yqs7p63baxg713rh2qhbbg78d58wfmmsk3nqbspm4nk7kl458"; depends=[dplyr ggplot2 Rcpp SummarizedExperiment tibble tidyr]; };
+  philr = derive2 { name="philr"; version="1.4.0"; sha256="1b6fvhpdp1wd20sdb72a3mxyrvdxvmsjp99f0hnpvnb1yfnjcm7r"; depends=[ape ggplot2 ggtree phangorn tidyr]; };
+  phosphonormalizer = derive2 { name="phosphonormalizer"; version="1.2.0"; sha256="1l0zrrah3p602g61jy5gh9bnv6qi26klwzvfs6c47z3dpsp7ikzy"; depends=[matrixStats plyr]; };
+  phyloseq = derive2 { name="phyloseq"; version="1.22.3"; sha256="0djy250cnzvjbb1psxwi4ffsb5yszsk54ma540nw0s7bbqy83pn0"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; };
+  piano = derive2 { name="piano"; version="1.18.1"; sha256="11da6z1xsk1r89ggh299yp5d3b4xw3nmmvj0lx6wf1liai4jss06"; depends=[Biobase BiocGenerics fgsea gplots igraph marray relations]; };
+  pickgene = derive2 { name="pickgene"; version="1.50.0"; sha256="14wgfjnpa1fnnvf0rrfil556ixdsicfyd3yvs7wwsri42vwixgl9"; depends=[MASS]; };
+  pint = derive2 { name="pint"; version="1.28.0"; sha256="0lz5svmm5gqxqcjic4689d07wkbndbszscs25cdm690wdgkvj5bm"; depends=[dmt Matrix mvtnorm]; };
+  pkgDepTools = derive2 { name="pkgDepTools"; version="1.44.0"; sha256="0s1zwh8dl8lm99avk3kd88kk5x9s1hmal7aqmc0psw57gxid91qq"; depends=[graph RBGL]; };
+  plateCore = derive2 { name="plateCore"; version="1.36.0"; sha256="02h42k6aivmchapa9bl5dxpl37706p31ky4a1hr48yfgacr750sn"; depends=[Biobase flowCore flowStats flowViz lattice latticeExtra MASS robustbase]; };
+  plethy = derive2 { name="plethy"; version="1.16.0"; sha256="027z64s0dcyvyzjmggz0s5jas3zcx7ckp2rs6190dp16hrldqrmc"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; };
+  plgem = derive2 { name="plgem"; version="1.50.0"; sha256="0sgxppvjiqraw292d1kxwl2lwb6sd1ck1w560q299sp78zsnsaan"; depends=[Biobase MASS]; };
+  plier = derive2 { name="plier"; version="1.48.0"; sha256="0n0mj5cwgpqgdlmyhifwb66yp3m3j610f8xs4bkhpk36x9b8bbvx"; depends=[affy Biobase]; };
+  plrs = derive2 { name="plrs"; version="1.18.0"; sha256="0y98vknq7052vsapd7wjihczbrfhvnckhxy80sxslbryh3nsmbfs"; depends=[Biobase BiocGenerics CGHbase ic_infer marray quadprog Rcsdp]; };
+  plw = derive2 { name="plw"; version="1.38.0"; sha256="1mys9rslhc3rb23wbvlnxwl4dcca2m395bxfg7i4217hvzai7b25"; depends=[affy MASS]; };
+  pmm = derive2 { name="pmm"; version="1.10.0"; sha256="1bzmh0p0c649sqp1lhz8zdqh4k7b3n78akgn2wlhawjbx3lb5f6i"; depends=[lme4]; };
+  podkat = derive2 { name="podkat"; version="1.10.0"; sha256="0c93gnrcw8rwq9r4f7kkpsdjflarwixjpadaa05w98vqa9x5ycc4"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rsamtools]; };
+  polyester = derive2 { name="polyester"; version="1.14.0"; sha256="1pxlkncfnrd15l1n4j5mj04in9pr6fxmxcwlrsqrqn58x4hk4kxs"; depends=[Biostrings IRanges limma logspline S4Vectors zlibbioc]; };
+  ppiStats = derive2 { name="ppiStats"; version="1.44.0"; sha256="14xrvcfbp177mpdlzi2kxmv0v9j93i4r1xsw06fr3gw9a7l6zg3r"; depends=[Biobase Category graph lattice ppiData RColorBrewer ScISI]; };
+  pqsfinder = derive2 { name="pqsfinder"; version="1.6.3"; sha256="0rf0sjd1gsdvn1qilckp5y9vb7j3wgs9h12gcxcjfrcaax8b3h6h"; depends=[BH Biostrings GenomicRanges IRanges Rcpp S4Vectors]; };
+  prada = derive2 { name="prada"; version="1.54.0"; sha256="19f8h411mzbrim1wvncr7wa3ah0qc1vy9kzcbx64pcif2xfb5qin"; depends=[Biobase BiocGenerics MASS RColorBrewer rrcov]; };
+  prebs = derive2 { name="prebs"; version="1.18.0"; sha256="0ss2rij3lv45d4va4dcpmclyaqmkjwk9hyppylkwlvcbgf0ng8xf"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; };
+  predictionet = derive2 { name="predictionet"; version="1.24.0"; sha256="10ki86jp7a4dim849zf5pbvd7bgbil8299xl08akyqf7pl37j2qj"; depends=[catnet igraph MASS penalized RBGL]; };
+  preprocessCore = derive2 { name="preprocessCore"; version="1.40.0"; sha256="0mrdgbkb9dcfr9gsqyxfpshnxx60mq97pl98b8yl00l2gfwz48ph"; depends=[]; };
+  proBAMr = derive2 { name="proBAMr"; version="1.12.0"; sha256="1arql2f4f6zjsqrshdqmbz8vlvydb5v66q0qa7rmdlz9hj9smahk"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer]; };
+  proFIA = derive2 { name="proFIA"; version="1.4.0"; sha256="0psn21jsrqplgwjisbfzqrfwiqcy45cwi04pmg1w1dw1bbwmjjzp"; depends=[Biobase BiocParallel minpack_lm missForest pracma ropls xcms]; };
+  procoil = derive2 { name="procoil"; version="2.6.0"; sha256="0ijqarp7rgszja1yymancygqcxsxw6cg4ydxzipw1wk6a3gl71ck"; depends=[Biostrings kebabs S4Vectors]; };
+  profileScoreDist = derive2 { name="profileScoreDist"; version="1.6.0"; sha256="0grw3386czykfq1yxrvqbph9l1xs4hpxb8hx0fjsd0v3mhvgkbk9"; depends=[BiocGenerics Rcpp]; };
+  progeny = derive2 { name="progeny"; version="1.0.0"; sha256="1ijhqsk6k70dmkkwxl003r9rcmx7j16z4i8fxjhxnx5d8g3swib9"; depends=[Biobase]; };
+  prot2D = derive2 { name="prot2D"; version="1.16.0"; sha256="1fp530fammi9xifx5g72jz8k7y3chjfg3mpybsbf5pzvva1429sj"; depends=[Biobase fdrtool impute limma MASS Mulcom qvalue samr st]; };
+  proteinProfiles = derive2 { name="proteinProfiles"; version="1.18.0"; sha256="069ksj5md9m7zylqwy6pyj3p9pa4j04vn4ss4d2r8n7a5z8f7d1g"; depends=[]; };
+  proteoQC = derive2 { name="proteoQC"; version="1.14.0"; sha256="1kv8ah7pbfl1gbb1pnjlmdw5bskfyh0hsn0nxraz0ybvwzn3kdsl"; depends=[dplyr ggplot2 MSnbase Nozzle_R1 plotly plyr reshape2 rmarkdown rpx rTANDEM seqinr tidyr VennDiagram XML]; };
+  psichomics = derive2 { name="psichomics"; version="1.4.4"; sha256="1h8vg90nlvjmpz8ific6n41xqc3fzs1133hvbyrjzqbwqy0cgqzp"; depends=[AnnotationHub cluster colourpicker data_table digest dplyr DT edgeR fastICA fastmatch ggplot2 ggrepel highcharter htmltools httr jsonlite limma miscTools pairsD3 plyr R_utils Rcpp shiny shinyBS shinyjs stringr survival XML xtable]; };
+  psygenet2r = derive2 { name="psygenet2r"; version="1.10.0"; sha256="0xf03vjyjiz4093cqnvi3dm532scx3f17mcf0av96h052vy10qb7"; depends=[BgeeDB Biobase BiocInstaller biomaRt ggplot2 GO_db igraph labeling RCurl reshape2 stringr topGO]; };
+  puma = derive2 { name="puma"; version="3.20.0"; sha256="0pcwppa2zlzpfl5fafl4h5xcf0pnyvz3hkykl192hzp26wcjsc1i"; depends=[affy affyio Biobase mclust oligo oligoClasses]; };
+  pvac = derive2 { name="pvac"; version="1.26.0"; sha256="0lmwy5a74ikq0sl6zqw69kag6q3p092qwh1lzvv7rl2j9wm2yl46"; depends=[affy Biobase]; };
+  pvca = derive2 { name="pvca"; version="1.18.0"; sha256="1bjv97fq6cpa8j11j0zjpmpxyszr5a2w7z95r47hvqysi1mm7ypv"; depends=[Biobase lme4 Matrix vsn]; };
+  pwOmics = derive2 { name="pwOmics"; version="1.10.1"; sha256="02ffzf5hp6mp24pmsivsb8kfarcxqdb7a02narhysp1drccyywzr"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots graph igraph rBiopaxParser STRINGdb]; };
+  qcmetrics = derive2 { name="qcmetrics"; version="1.16.0"; sha256="1agypdz696i868j7yzispmbljm5vc67zpfc3njq322bvgcfv6j78"; depends=[Biobase knitr Nozzle_R1 pander S4Vectors xtable]; };
+  qpcrNorm = derive2 { name="qpcrNorm"; version="1.36.0"; sha256="1lgdlggp4g19d47lv3wr87zj7lc50w433f2j9c7sc5symslqzrp5"; depends=[affy Biobase limma]; };
+  qpgraph = derive2 { name="qpgraph"; version="2.12.0"; sha256="10xmdlc2h67krc2bbcpv2sjgv8vqdxn49knzpnn22rvgc3ab5np0"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; };
+  qrqc = derive2 { name="qrqc"; version="1.32.0"; sha256="0p8r78qrrrkmvbvlapwbdzd363y8qmiwmw3aiipmv959cpbsy2ci"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rsamtools testthat xtable]; };
+  qsea = derive2 { name="qsea"; version="1.4.0"; sha256="00fym964mlzkydmd6mmhd2hsv87lga5zg8cc6dglzwycmbmcb7cr"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges gtools HMMcopy IRanges limma Rsamtools rtracklayer zoo]; };
+  quantro = derive2 { name="quantro"; version="1.12.0"; sha256="1vw44c0vr1mx5mc89i864l8d9hjp0pyrv6fdd1kzswzdi02nf8bq"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; };
+  quantsmooth = derive2 { name="quantsmooth"; version="1.44.0"; sha256="1n0q6mlmsidzw9qifplm9hhcxbx37hb6062mssw1klpmy2x9sfhg"; depends=[quantreg]; };
+  qusage = derive2 { name="qusage"; version="2.12.0"; sha256="08x9v602fgdnzff0csiz5nwzmw8ld1z6yy607acncs0hnj16jvcw"; depends=[Biobase limma lsmeans nlme]; };
+  qvalue = derive2 { name="qvalue"; version="2.10.0"; sha256="1rd9rnf16kh8wc076kahd9hsb9rfwsbzmz3kjmp0pj6rbiq0051i"; depends=[ggplot2 reshape2]; };
+  r3Cseq = derive2 { name="r3Cseq"; version="1.24.0"; sha256="1nahiwz98w788c63d140bjq664dhjmycpkmrcdv4s27hrwpwagz3"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; };
+  rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.18.0"; sha256="1n8vlnxsn1n9c1vpss0zzlr2i088gwf34gjr7kvqmpyyplym51q4"; depends=[data_table XML]; };
+  rCGH = derive2 { name="rCGH"; version="1.8.1"; sha256="1dmxijdbvmjspc8p1k04as326p98gyjrkdwrhjnzm5jdxm87jjjb"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; };
+  rDGIdb = derive2 { name="rDGIdb"; version="1.4.4"; sha256="08hddkq1jpb24gp3id5w0bv48cqzx7h81mvdl0wvjsd8gz31nw2c"; depends=[httr jsonlite]; };
+  rGADEM = derive2 { name="rGADEM"; version="2.26.0"; sha256="1rbw8k20ri6jhqn9mgkjzyjp7s1z58bgxd5hb35zcpyd7fb2aifw"; depends=[Biostrings BSgenome IRanges seqLogo]; };
+  rGREAT = derive2 { name="rGREAT"; version="1.11.1"; sha256="040pvbnx935f49xgpj3wx64dfsf95f729sb93qmpn74ndpa1f3h6"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; };
+  rHVDM = derive2 { name="rHVDM"; version="1.44.0"; sha256="1qw4k1xq4qq378dgymxw83ilw6sb2qk3zm6pk15br4v935016vgz"; depends=[affy Biobase minpack_lm R2HTML]; };
+  rMAT = derive2 { name="rMAT"; version="3.28.0"; sha256="0cn7ffipgbj2b7vim6l0flw25nn0w7pdzxzz0m41n2jz18rm7203"; depends=[affxparser Biobase BiocGenerics IRanges]; };
+  rRDP = derive2 { name="rRDP"; version="1.12.0"; sha256="0iw4hjhvf32ng8bqhqs0b2s882a8fcvpq4wq8ifrj27n5sxjs5gh"; depends=[Biostrings]; };
+  rSFFreader = derive2 { name="rSFFreader"; version="0.26.0"; sha256="1a2m567jnb90ra8vk5wagc756h5fahss3hs4xxky1xgacpafyk5k"; depends=[Biostrings IRanges S4Vectors ShortRead XVector]; };
+  rTANDEM = derive2 { name="rTANDEM"; version="1.18.0"; sha256="0a6w19kfdg3776iksvw60qyxbrjdvk7d02q5a4kcws1cn73dzpi2"; depends=[data_table Rcpp XML]; };
+  rTRM = derive2 { name="rTRM"; version="1.16.0"; sha256="0bckbq0h1iy2vrv3mbzm9bq9r709hgbs240sa2dmf3bwn7329rxh"; depends=[AnnotationDbi DBI igraph RSQLite]; };
+  rTRMui = derive2 { name="rTRMui"; version="1.16.0"; sha256="0qx969aivrivccr443jvpvjji3zabp31jgg0cd4ddl5w0gw2i1pm"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; };
+  rain = derive2 { name="rain"; version="1.12.0"; sha256="1nlz4vri4blqk4d7hzh8wsda8viwl80f4vhpfx04sxmsz5i9w305"; depends=[gmp multtest]; };
+  rama = derive2 { name="rama"; version="1.52.0"; sha256="1g67sv7hm64m0c8g9z9y2pnxhdlbhpddyg6yx364klkx3gn017hp"; depends=[]; };
+  ramwas = derive2 { name="ramwas"; version="1.2.0"; sha256="013gqial7zmalh4y2a97fp6262h3038mr2j3pg71vm7r4ww5q16c"; depends=[BiocGenerics biomaRt Biostrings digest filematrix GenomicAlignments glmnet KernSmooth Rsamtools]; };
+  randPack = derive2 { name="randPack"; version="1.24.0"; sha256="1qb7r4f8cjmn4wdpqydbqq75xzzxffqbh28dcfbbymcyvnc0vxma"; depends=[Biobase]; };
+  rbsurv = derive2 { name="rbsurv"; version="2.36.0"; sha256="1v4fdlfl884w74w6rlap7rqckmk1kiryp2w0zciy4ghilkgikbf5"; depends=[Biobase survival]; };
+  rcellminer = derive2 { name="rcellminer"; version="2.0.0"; sha256="1y5rzv9ggfxgyy4z5hm7awd8zb8n57qr2954p2j4ikhj62b6h6z2"; depends=[Biobase fingerprint ggplot2 gplots rcdk rcellminerData shiny stringr]; };
+  readat = derive2 { name="readat"; version="1.4.0"; sha256="10pib536kmkpi3ij8cccxyap7zw0q1jfd1bcv4c38vn04jm3smaa"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_sets assertive_types Biobase data_table dplyr magrittr openxlsx pathological reshape2 stringi SummarizedExperiment testthat tidyr]; };
+  reb = derive2 { name="reb"; version="1.56.0"; sha256="0sh9r77r2s3fmkbkwrazl705dqwr2wh0mx34pxhjfvfic0jc1r5x"; depends=[Biobase idiogram]; };
+  recount = derive2 { name="recount"; version="1.4.4"; sha256="1pm7p4qfnqajmm8ym5bq71hi8bjrm6xjax838x79b67d825nhsw9"; depends=[BiocParallel derfinder downloader GenomeInfoDb GenomicRanges GEOquery IRanges RCurl rentrez rtracklayer S4Vectors SummarizedExperiment]; };
+  recoup = derive2 { name="recoup"; version="1.6.0"; sha256="09i0c2wv9c6hqc4mq6kklp0maqskpfxj871j44256dxlfh81xm3b"; depends=[BiocGenerics biomaRt circlize ComplexHeatmap GenomicAlignments GenomicRanges ggplot2 plyr rtracklayer]; };
+  regionReport = derive2 { name="regionReport"; version="1.12.2"; sha256="1fvkmd2yfkvkj44ldywr1z0l1cn7c64nq3920fhlarqygv92d7xx"; depends=[BiocStyle DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitcitations knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; };
+  regioneR = derive2 { name="regioneR"; version="1.10.0"; sha256="1vprp3l929hwzmvgskbhawfgnrymwc9n2rxd16rgagnv1dxnjxfp"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer S4Vectors]; };
+  regsplice = derive2 { name="regsplice"; version="1.4.0"; sha256="0gzm6xazidlkz33ialrxh47n1glx3bkz484rf7ily965fhs0vv53"; depends=[edgeR glmnet limma pbapply S4Vectors SummarizedExperiment]; };
+  restfulSE = derive2 { name="restfulSE"; version="1.0.2"; sha256="14sw5k0bhw059yn8lw6rd275j3756znp7pirdyb1srva53isgdik"; depends=[AnnotationDbi AnnotationHub bigrquery DBI DelayedArray dplyr ExperimentHub GO_db magrittr reshape2 rhdf5client S4Vectors SummarizedExperiment]; };
+  rexposome = derive2 { name="rexposome"; version="1.0.0"; sha256="1lg3ms0zx60nbhb7y7bhcl49cf63g0licxjpqrmx2jg9w0ikfj5g"; depends=[Biobase circlize corrplot FactoMineR ggplot2 ggrepel glmnet gplots gridExtra gtools Hmisc imputeLCMD lme4 lsr mice pryr psygenet2r reshape2 S4Vectors scales scatterplot3d stringr]; };
+  rfPred = derive2 { name="rfPred"; version="1.16.0"; sha256="1m79rykh534iss41nw62j0dyx6v0vqk543m7dlgl7zm2kpyzdpc3"; depends=[data_table GenomicRanges IRanges Rsamtools]; };
+  rgsepd = derive2 { name="rgsepd"; version="1.10.0"; sha256="0r1adlc7dxwnm8h6nh4w05z3bffvr10cch7i68a7dli968yza2vj"; depends=[AnnotationDbi biomaRt DESeq2 GO_db goseq gplots hash org_Hs_eg_db SummarizedExperiment]; };
+  rhdf5 = derive2 { name="rhdf5"; version="2.22.0"; sha256="145858qg1xan6imxcbprzq3yn3mdf532aahdr6cibvdjg47hs4c1"; depends=[zlibbioc]; };
+  rhdf5client = derive2 { name="rhdf5client"; version="1.0.6"; sha256="1h2dvz4rx11gsxj2fy61jwbkxgdx1jq0xahxyq7mclkbc4p8v4xy"; depends=[httr rjson S4Vectors]; };
+  riboSeqR = derive2 { name="riboSeqR"; version="1.12.0"; sha256="0fg2zn5az1djdjnsrli26rl53ljrrjzmspx02dmgwf1a7nm7qmfz"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools seqLogo]; };
+  rnaSeqMap = derive2 { name="rnaSeqMap"; version="2.36.0"; sha256="0y0mxzs24jz9nxcvjxymj0zxjfn1rlx3d8dzvdmfn98lbgyzm4dv"; depends=[Biobase DBI DESeq edgeR GenomicAlignments GenomicRanges IRanges Rsamtools]; };
+  rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.8.0"; sha256="050dc6asknh8snk6xkvpp5ivyikalslsawadh11lnw5wb4fixmhm"; depends=[RColorBrewer]; };
+  roar = derive2 { name="roar"; version="1.14.0"; sha256="1q0a9l3wrlpr0s9gy93zm6lpxp6b18kg8bm2hn0759b73qpqw2bf"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges rtracklayer S4Vectors SummarizedExperiment]; };
+  rols = derive2 { name="rols"; version="2.6.1"; sha256="0xcsfgnsykdx4iiixsx7iafnzspirpkvx4bj5swfkmay6gfif27w"; depends=[Biobase BiocGenerics httr jsonlite progress]; };
+  ropls = derive2 { name="ropls"; version="1.10.0"; sha256="05fr2s8ciqn20scr6b9i4bnss7ah2svyfg6jcs605w8vc1i90bmw"; depends=[Biobase]; };
+  rpx = derive2 { name="rpx"; version="1.14.0"; sha256="004kq35qzk7a16vwiqxxc42k3djvwnay70hl65913z09cv8k48mk"; depends=[RCurl xml2]; };
+  rqt = derive2 { name="rqt"; version="1.4.0"; sha256="1i563yifxib3lib3x734nvkx7r1nnkp2x9hh7yrkrbwr6pp5hv39"; depends=[car CompQuadForm glmnet Matrix metap pls ropls RUnit SummarizedExperiment]; };
+  rqubic = derive2 { name="rqubic"; version="1.24.0"; sha256="1568ipcnbgby4vwv0w8ak267dhg2ad5axxgir09xwxqdp3vm7cxm"; depends=[biclust Biobase BiocGenerics]; };
+  rsbml = derive2 { name="rsbml"; version="2.36.0"; sha256="10bbvjv1ihps5r1rx4hrfmdssgvak1dy15098jk61rqdl50xrf8i"; depends=[BiocGenerics graph]; };
+  rtracklayer = derive2 { name="rtracklayer"; version="1.38.3"; sha256="1khzfczm35k5lq9h0jlqrq01192spzjyh8s6is89spj006flwn4k"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl Rsamtools S4Vectors XML XVector zlibbioc]; };
+  runibic = derive2 { name="runibic"; version="1.0.2"; sha256="1nccwf551jpskh4adg3swfcdg2qwvq17cjigjq0aqp8ymcqani8v"; depends=[biclust Rcpp SummarizedExperiment testthat]; };
+  sRAP = derive2 { name="sRAP"; version="1.18.0"; sha256="0yh1a2nlr1cy82vsp8kqghzgy84mwig1cpdys68bapj3cdzv9g5s"; depends=[gplots pls qvalue ROCR WriteXLS]; };
+  sSeq = derive2 { name="sSeq"; version="1.16.0"; sha256="08japi9dybqzvhcjj6yvchy94lbv62wbcd7kz3ilcygs6ykawqlh"; depends=[caTools RColorBrewer]; };
+  safe = derive2 { name="safe"; version="3.18.0"; sha256="0wpbmisvgkz1axx930nh5dx4dmhgmz2z5g17k1ifyvigpap75hh2"; depends=[AnnotationDbi Biobase SparseM]; };
+  sagenhaft = derive2 { name="sagenhaft"; version="1.48.0"; sha256="0g3jd86gv8zkdjqjd617b9chrl6gmbilhzsa7afkxzbqvr7k3h4y"; depends=[SparseM]; };
+  samExploreR = derive2 { name="samExploreR"; version="1.2.0"; sha256="0hbdcybv99h1wfpnlwinkwnbiizprl0zvdrnqbw9z049mvw6dls4"; depends=[edgeR ggplot2 RNAseqData_HNRNPC_bam_chr14 Rsubread]; };
+  sampleClassifier = derive2 { name="sampleClassifier"; version="1.3.1"; sha256="06l1clgs3xkv86pm7k4an5nbsiwykmclshcqdyyz820hjil4jzys"; depends=[annotate e1071 ggplot2 MGFM MGFR]; };
+  sangerseqR = derive2 { name="sangerseqR"; version="1.14.0"; sha256="162rmbri3il6xf4ifl46q7yryp3fhcxy5vyg3s7rnhk2c7scm2ss"; depends=[Biostrings shiny]; };
+  sapFinder = derive2 { name="sapFinder"; version="1.16.0"; sha256="1xwm6ljpsfq2ps0568lk7ybab2x1zhijwgn6c1qvrwp674y3h51q"; depends=[pheatmap Rcpp rTANDEM]; };
+  savR = derive2 { name="savR"; version="1.16.0"; sha256="1z50z5lf6x58phcsbrmy2pwz9zgm89yb0lpr9v4i5rd46bfi22ib"; depends=[ggplot2 gridExtra reshape2 scales XML]; };
+  scDD = derive2 { name="scDD"; version="1.2.0"; sha256="04d4h29kv8k3i92jpbckcakky6f7ww4mjgv9f3ha702c8vphp5c1"; depends=[arm BiocParallel EBSeq fields ggplot2 mclust outliers S4Vectors scran SingleCellExperiment SummarizedExperiment]; };
+  scPipe = derive2 { name="scPipe"; version="1.0.6"; sha256="16day8ga9qp9y4aff2z6j1y9lclpzzl7nqw1h3pawfpy465kwif8"; depends=[BiocGenerics biomaRt GGally ggplot2 MASS mclust Rcpp reshape Rhtslib robustbase S4Vectors scales SingleCellExperiment SummarizedExperiment zlibbioc]; };
+  scater = derive2 { name="scater"; version="1.6.3"; sha256="0q3s96gf8saa1dq2fvmpl0jyj7bx3wrdfck3hanb8pxkcir2p7dn"; depends=[beachmat Biobase BiocGenerics biomaRt data_table dplyr edgeR ggbeeswarm ggplot2 limma Matrix matrixStats plyr Rcpp reshape2 rhdf5 Rhdf5lib rjson S4Vectors shiny shinydashboard SingleCellExperiment SummarizedExperiment tximport viridis]; };
+  scde = derive2 { name="scde"; version="2.6.0"; sha256="0cxaail8sa0bn56gp88x64p0k022hixh44s32i37al4wd70nlv12"; depends=[BiocParallel Cairo edgeR extRemes flexmix MASS mgcv nnet pcaMethods quantreg RColorBrewer Rcpp RcppArmadillo rjson RMTstat Rook]; };
+  scfind = derive2 { name="scfind"; version="1.0.0"; sha256="1rm2sgdv3z2lxrlws227z6q8h4ydpbvnd37l7f8pask1nc6zbky3"; depends=[bit dplyr hash Rcpp reshape2 SingleCellExperiment SummarizedExperiment]; };
+  scmap = derive2 { name="scmap"; version="1.1.5"; sha256="0jqgk9sjb5bp5gbzq14vsif5gd5ry4213glvnpmhgqm23hmwbfhi"; depends=[Biobase BiocGenerics dplyr e1071 ggplot2 googleVis matrixStats proxy randomForest Rcpp RcppArmadillo reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; };
+  scone = derive2 { name="scone"; version="1.2.0"; sha256="1xq48d3z78p54iclb1ii074i7f88qfzh5djfiyrwf3k6gsapadfi"; depends=[aroma_light BiocParallel boot class cluster compositions diptest edgeR fpc gplots hexbin limma matrixStats mixtools rARPACK RColorBrewer rhdf5 RUVSeq SummarizedExperiment]; };
+  scoreInvHap = derive2 { name="scoreInvHap"; version="1.0.0"; sha256="04q2rs1gw7v97lwcialyswqzl0kd5c5298v60cm6wha25i6lwgbs"; depends=[BiocParallel Biostrings GenomicRanges snpStats SummarizedExperiment VariantAnnotation]; };
+  scran = derive2 { name="scran"; version="1.6.7"; sha256="0zfm5i8xrnzb3894xygqd6zkbwaa2x3z74wbxw39fcjhyhxv2hmb"; depends=[beachmat BiocGenerics BiocParallel DT dynamicTreeCut edgeR FNN ggplot2 igraph limma Matrix Rcpp Rhdf5lib S4Vectors scater shiny SingleCellExperiment statmod SummarizedExperiment viridis zoo]; };
+  scsR = derive2 { name="scsR"; version="1.14.0"; sha256="05xqrv1babqvlvr4m5k0r7yy4fbr0y46f3i4v4zcjilda1qf54pb"; depends=[BiocGenerics Biostrings ggplot2 hash IRanges plyr RColorBrewer sqldf STRINGdb]; };
+  segmentSeq = derive2 { name="segmentSeq"; version="2.12.0"; sha256="0jqdddzrxahf6i7cmaay5v9ig9969avhv8ddh72v6ndfphlkfb64"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; };
+  semisup = derive2 { name="semisup"; version="1.2.0"; sha256="14q2p38a8r4ry8swwi88k96rchmcnplknq1a62lvm98k09k1887r"; depends=[SummarizedExperiment VGAM]; };
+  seq2pathway = derive2 { name="seq2pathway"; version="1.10.0"; sha256="0wz9x4kv2zw21sppkmfp9qmclwffm5yhzx580yd3iggi1calq8bg"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; };
+  seqCAT = derive2 { name="seqCAT"; version="1.0.0"; sha256="00m0w0l14y8k1viqv60n8p384lv80vnny3x9f5rmi1bba02kxkw7"; depends=[dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges lazyeval S4Vectors scales SummarizedExperiment tidyr VariantAnnotation]; };
+  seqCNA = derive2 { name="seqCNA"; version="1.24.0"; sha256="1qq217mrxi0ygafyy4fvbjxhwabvific2bj0iq7871dx4dq3mcf9"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; };
+  seqLogo = derive2 { name="seqLogo"; version="1.44.0"; sha256="1ql4q4vx0j61a893dqc3c8zxmgs8sqhy3j1qhyfdvbd01vw9w1kq"; depends=[]; };
+  seqPattern = derive2 { name="seqPattern"; version="1.10.0"; sha256="1kcm5w83q7w0v0vs7nyp4gq5z86c6n6pqy9zmyyhxcrns7f597pm"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; };
+  seqTools = derive2 { name="seqTools"; version="1.12.0"; sha256="1m69xbd9p3mzwn9wgn30b6995lydn973dfz9l65c0f5qr59ww5ns"; depends=[zlibbioc]; };
+  seqbias = derive2 { name="seqbias"; version="1.26.0"; sha256="1i1zqslv0qws12x45c37h7fkgpz5wv3v87h72n4pw8gh80bgcafl"; depends=[Biostrings GenomicRanges Rsamtools zlibbioc]; };
+  seqcombo = derive2 { name="seqcombo"; version="1.0.0"; sha256="0bkap2c1061yg2ws2m1fafxi37pqzkg9mzim5sqiq8sgcfmk6na6"; depends=[Biostrings cowplot dplyr ggplot2 igraph magrittr rvcheck]; };
+  seqplots = derive2 { name="seqplots"; version="1.16.0"; sha256="1plwmdq2hjcqs94l7s03h9amcxdimwdrmi11z03xn10dfn1xig70"; depends=[Biostrings BSgenome class DBI digest DT fields GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges jsonlite kohonen plotrix RColorBrewer reshape2 Rsamtools RSQLite rtracklayer S4Vectors shiny]; };
+  sevenbridges = derive2 { name="sevenbridges"; version="1.8.0"; sha256="1jlw69yxh697q3bwd54mvzfiqskg469jyyh97sqnlizjmm5hiw11"; depends=[curl docopt dplyr httr jsonlite liftr miniUI objectProperties rstudioapi S4Vectors shiny stringr uuid yaml]; };
+  shinyMethyl = derive2 { name="shinyMethyl"; version="1.14.0"; sha256="17w7shgr4s5w3y1ik8zgr9brv7q87dx9l6dfqywsyvfmmkddimwa"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; };
+  shinyTANDEM = derive2 { name="shinyTANDEM"; version="1.16.0"; sha256="17x0bq1kzvmqqf30y0dmmp9777i62525mp4ysyv2m6vb9bgrbc4y"; depends=[mixtools rTANDEM shiny xtable]; };
+  sigPathway = derive2 { name="sigPathway"; version="1.46.0"; sha256="18nn7rpg67dz30v1drm0lnsb1wnww7maxdg4gk960wayasp8hk2z"; depends=[]; };
+  sigaR = derive2 { name="sigaR"; version="1.26.0"; sha256="196jj39frqi9vmdl592ihkji4vxfimv6xr9cbmlgnnpjpd68b05k"; depends=[Biobase CGHbase corpcor igraph limma marray MASS mvtnorm penalized quadprog snowfall]; };
+  siggenes = derive2 { name="siggenes"; version="1.52.0"; sha256="1g88rga3pksmydkqd117wsqj1i5hfzi3rkadac51n8bk0sx6rfmw"; depends=[Biobase multtest]; };
+  sights = derive2 { name="sights"; version="1.4.0"; sha256="1hnzvx9avgvv4jgsgilbdyri9qqbf4sbcpyy47j31sg70ilzydxs"; depends=[ggplot2 lattice MASS qvalue reshape2]; };
+  signeR = derive2 { name="signeR"; version="1.4.0"; sha256="0rmdwjhp6ps9bvmhk1znarzg1kk319sb2rvxr51qwwka7idxfa0n"; depends=[BiocGenerics Biostrings BSgenome class GenomicRanges nloptr NMF PMCMR Rcpp RcppArmadillo VariantAnnotation]; };
+  sigsquared = derive2 { name="sigsquared"; version="1.10.0"; sha256="0v68p83k43xx7yvxzknxzwqyvvccffi557dlz25wh8v8s3wkyk2c"; depends=[Biobase survival]; };
+  similaRpeak = derive2 { name="similaRpeak"; version="1.10.0"; sha256="144mc40q2jgswk2w1ri5bh0cs8lgs0b6s1jwljrilfpvjww0r36f"; depends=[R6]; };
+  simpleaffy = derive2 { name="simpleaffy"; version="2.54.0"; sha256="0b91hlsgq61rbwv08w2951dric7chvq1mfsp9716qvw7l8jqngng"; depends=[affy Biobase BiocGenerics gcrma genefilter]; };
+  simulatorZ = derive2 { name="simulatorZ"; version="1.12.0"; sha256="1nzkaa6x0my1pk4h8naznckmzdd72wwdfxk6ivczbpnzxhnpz8nd"; depends=[Biobase BiocGenerics CoxBoost gbm GenomicRanges Hmisc IRanges S4Vectors SummarizedExperiment survival]; };
+  sincell = derive2 { name="sincell"; version="1.10.0"; sha256="07p2ck9wzxw4kz9bzxq8kggmmy2yvbz939mcn43giag1chx2ndax"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; };
+  sizepower = derive2 { name="sizepower"; version="1.48.0"; sha256="199rqpbjp4l5faw6z9srfg7vs7kmdbzh12vm52s02v8mayb46mbp"; depends=[]; };
+  skewr = derive2 { name="skewr"; version="1.10.0"; sha256="0s78dp3lg27x4qrs9q9nvi69vfrphncf5ivm15rf9k49smhr3bh3"; depends=[IlluminaHumanMethylation450kmanifest IRanges methylumi minfi mixsmsn RColorBrewer wateRmelon]; };
+  slalom = derive2 { name="slalom"; version="1.0.0"; sha256="0jjr9k7fdvi4sg1ivnb65migcmyz3rg3fwm9gd50q6w80bs64g89"; depends=[BH ggplot2 GSEABase Rcpp RcppArmadillo rsvd SingleCellExperiment SummarizedExperiment]; };
+  snapCGH = derive2 { name="snapCGH"; version="1.48.0"; sha256="12pdmmywr9lf44kna3wr59h1zyjck3734qw11ahhah40j5k247xd"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; };
+  snm = derive2 { name="snm"; version="1.26.0"; sha256="14fpxl3h7673qffavknavjnlwcqk22qx3qh7i1p2i35gg3qw5rs0"; depends=[corpcor lme4]; };
+  snpStats = derive2 { name="snpStats"; version="1.28.0"; sha256="1x9qwynh2hwl24vq02naf4mchpch7xi2pkdrlgw896k28kx0lvir"; depends=[BiocGenerics Matrix survival zlibbioc]; };
+  soGGi = derive2 { name="soGGi"; version="1.10.0"; sha256="0jlpyq55byaqlnmn9n2k5scmm4iv7gzyl0ll7fn6ddhi3vxw4jxi"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; };
+  sparseDOSSA = derive2 { name="sparseDOSSA"; version="1.2.0"; sha256="0pbj09424a8f0xsr446bcxqgmha2zzmfvrcszknli1ai7isp23sq"; depends=[MASS MCMCpack optparse tmvtnorm]; };
+  specL = derive2 { name="specL"; version="1.12.0"; sha256="03bkh0z3pd6jl47wq2h6zd73fvaggwnaj2b4ibijwkg1643mfiip"; depends=[DBI protViz Rcpp RSQLite seqinr]; };
+  spikeLI = derive2 { name="spikeLI"; version="2.38.0"; sha256="00fixl9jpjfm0qgsg1lwi0315sa53j1j9fbrl69j8y2gbr8kgg28"; depends=[]; };
+  spkTools = derive2 { name="spkTools"; version="1.34.0"; sha256="0vpyv78c6c58qrcz91mir7jh9gx2j2l48bclabvgi0k2156wpwn7"; depends=[Biobase gtools RColorBrewer]; };
+  splatter = derive2 { name="splatter"; version="1.2.1"; sha256="0iap91mmfan5p8wcpkxmqrrlk4zhgcigl08js5k1kcizmqkiar5g"; depends=[akima BiocGenerics BiocParallel checkmate edgeR fitdistrplus ggplot2 locfit matrixStats scales scater SingleCellExperiment SummarizedExperiment]; };
+  spliceR = derive2 { name="spliceR"; version="1.20.0"; sha256="1skwj4cqf4s14df42jgy5b9fxrb5c5np9khc0wkg732qddbdlagd"; depends=[cummeRbund GenomicRanges IRanges plyr RColorBrewer rtracklayer VennDiagram]; };
+  spliceSites = derive2 { name="spliceSites"; version="1.26.0"; sha256="19av0wkdvy4x4p0nkhy9ca450d6j0s68m2lp26116ydh4lzv4p8x"; depends=[Biobase BiocGenerics Biostrings doBy IRanges rbamtools refGenome seqLogo]; };
+  splicegear = derive2 { name="splicegear"; version="1.50.0"; sha256="0i47l91p77s4acgrx9c8ll2va7amysw1g2acs36mn99hpz86v4m4"; depends=[annotate Biobase XML]; };
+  splineTimeR = derive2 { name="splineTimeR"; version="1.6.0"; sha256="12x1lzcz8xih462nbzihdn9npypzr9clwy36vvwrfwh2plcq7314"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; };
+  splots = derive2 { name="splots"; version="1.44.0"; sha256="09zcf9l3mr3y650di1v5h47fp020n0cf5hp9ccjwf1480wwl7rpn"; depends=[RColorBrewer]; };
+  spotSegmentation = derive2 { name="spotSegmentation"; version="1.52.0"; sha256="0jmhgk37na16fhlfqx3a6fhm7syyh25qh4nrwgc4f94d13hs70mp"; depends=[mclust]; };
+  sscore = derive2 { name="sscore"; version="1.50.0"; sha256="0ivs9fb6ps0hv1ywja95x9xbsmljcv6zjkpvyb25a6l06vyjdh08"; depends=[affy affyio]; };
+  sscu = derive2 { name="sscu"; version="2.8.0"; sha256="1aa48cr8xxin9vzv280k7m4z6qy59gzclhdnj9gpxrh90kghv5vs"; depends=[BiocGenerics Biostrings seqinr]; };
+  ssize = derive2 { name="ssize"; version="1.52.0"; sha256="02c1gwl4c6sf95k0rgahb2vbgwi53vlfz6nydg7zmqa3hvf16mr3"; depends=[gdata xtable]; };
+  ssviz = derive2 { name="ssviz"; version="1.12.0"; sha256="1q8hvqpqniyfma8k2j0xpb8jnc05xdazh74kk3b0fkriqz11n8xw"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; };
+  staRank = derive2 { name="staRank"; version="1.20.0"; sha256="0f7ql6sc5dxk86ca4qmlgsbvzvw1h97y6jmzbrcvn24n9c3hkrgy"; depends=[cellHTS2]; };
+  stageR = derive2 { name="stageR"; version="1.0.0"; sha256="0553av4ys27ag7v77mfb7wxw7d09g1f0vf4615jcjir9mvc6y3qj"; depends=[SummarizedExperiment]; };
+  statTarget = derive2 { name="statTarget"; version="1.8.0"; sha256="0z6niv4i50f8b7g78c7rcdrniblvv5sq2phb7vd2glnh038r1rl0"; depends=[gWidgets2 gWidgets2RGtk2 impute pdist pls plyr randomForest ROC rrcov]; };
+  stepNorm = derive2 { name="stepNorm"; version="1.50.0"; sha256="10fd623pqy944q9l913bv1a3dh7wk4i0r211hvvzdr39kfhjl6mf"; depends=[marray MASS]; };
+  subSeq = derive2 { name="subSeq"; version="1.8.0"; sha256="1z9qwfclhnnvcp4r4zfi201rmgd0hj47rd77x958m1d6d3z65m34"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; };
+  supraHex = derive2 { name="supraHex"; version="1.16.0"; sha256="10lhdhlb33p91np6ldmxc8yqgxwly7p37nlacm77q35dp05a453n"; depends=[ape hexbin MASS]; };
+  survcomp = derive2 { name="survcomp"; version="1.28.4"; sha256="185k9srpfzvr51xfbgq1xy39x40cxgcvvq772y9gdk1702fxvyw0"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; };
+  sva = derive2 { name="sva"; version="3.26.0"; sha256="0q5xb68wfcnchy8rkv5ma67pmz1i91lsnvmwmj8f1c3w4xan3pgw"; depends=[BiocParallel genefilter limma matrixStats mgcv]; };
+  swfdr = derive2 { name="swfdr"; version="1.4.0"; sha256="0ls0w09bkxxqv1y50d5c1s0qpxb1xdyall8ypvky8awi7v6jlrcg"; depends=[dplyr ggplot2 reshape2]; };
+  switchBox = derive2 { name="switchBox"; version="1.14.0"; sha256="0mhkf4wwd3v3s1148nafbd6x6ys8j933glh4gp3wj24ddmmpxvb2"; depends=[gplots pROC]; };
+  switchde = derive2 { name="switchde"; version="1.4.0"; sha256="0fxdg1d0jgqqas5cwmpcm96qfja0xw62x1421ahxfsrh1q6hqay6"; depends=[dplyr ggplot2 SingleCellExperiment SummarizedExperiment]; };
+  synapter = derive2 { name="synapter"; version="2.2.0"; sha256="1m9s2pdm38wb5riyy0wf8g4a2ilrrkznsy9virdiqqm5kqzpkzic"; depends=[Biobase Biostrings cleaver knitr lattice MSnbase multtest qvalue RColorBrewer readr rmarkdown]; };
+  synergyfinder = derive2 { name="synergyfinder"; version="1.4.2"; sha256="11zpza9ghd1dckb604c5v3rxpgf6v29qm9yp1vpdnm04gfj2q6iy"; depends=[drc ggplot2 gplots gridBase lattice nleqslv reshape2 SpatialExtremes]; };
+  synlet = derive2 { name="synlet"; version="1.8.0"; sha256="1pchh66wg3cvx1kq1l521lg7w0qpnw5azig339pnpwwymh9fpa5j"; depends=[doBy dplyr ggplot2 magrittr RankProd RColorBrewer reshape2]; };
+  systemPipeR = derive2 { name="systemPipeR"; version="1.12.0"; sha256="11mj8pjq5vj25768vmagpzv74fvi3p3kdk5zdlznqyiaggri04cv"; depends=[annotate BatchJobs BiocGenerics Biostrings DESeq2 edgeR GenomicFeatures GenomicRanges ggplot2 GO_db GOstats limma pheatmap rjson Rsamtools ShortRead SummarizedExperiment VariantAnnotation]; };
+  tRanslatome = derive2 { name="tRanslatome"; version="1.16.0"; sha256="1whnx5ka8jhqsis68drs7ah3dg5lj6vfw3a42l7s8mp94n0qdixj"; depends=[anota Biobase DESeq edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd samr sigPathway topGO]; };
+  tenXplore = derive2 { name="tenXplore"; version="1.0.0"; sha256="0f57ak81vndff6xij2hn28xnrly1088sw7bc1jgfgzldy94mxn1m"; depends=[AnnotationDbi matrixStats ontoProc org_Mm_eg_db restfulSE shiny SummarizedExperiment]; };
+  ternarynet = derive2 { name="ternarynet"; version="1.22.0"; sha256="1k8s31zjyrid1wkhg5ighphi8nr8i5nbcd0sjqpjzv1zhi35hdaa"; depends=[igraph]; };
+  tigre = derive2 { name="tigre"; version="1.32.0"; sha256="007lnj4hcq8sls8vdr59h7hjjsdjwk3i6snx97i8ply683ndc3ph"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; };
+  tilingArray = derive2 { name="tilingArray"; version="1.56.0"; sha256="0ahw51r1zsb47r2q90670ngakb34y49d3njwlchyk2r6vz3kzqkb"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; };
+  timecourse = derive2 { name="timecourse"; version="1.50.0"; sha256="0lr4znyi82mqjm02wwr7zq6l2cfbq2gliynxim45xhahqp43cbpr"; depends=[Biobase limma marray MASS]; };
+  timescape = derive2 { name="timescape"; version="1.2.0"; sha256="0v3a7gn2d852h8m0053a57w153z4nlmp5mb5g96kjw06vvwr71jd"; depends=[dplyr gtools htmlwidgets jsonlite stringr]; };
+  tkWidgets = derive2 { name="tkWidgets"; version="1.56.0"; sha256="0z1vd0nymyvvrn5jc97q33y9xl6w8pd4wzb6yyfjg8jy85kswfgf"; depends=[DynDoc widgetTools]; };
+  tofsims = derive2 { name="tofsims"; version="1.6.0"; sha256="1zpq0c01fqm3yl2mkvx1yl2ajj2a933wa6h7hinrh3mdyix8pzrn"; depends=[ALS ChemometricsWithR KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; };
+  topGO = derive2 { name="topGO"; version="2.30.0"; sha256="1hqffz5qp7glxdvjp37005g8qk5nam3f9wpf6d1wjnzpar04f3dz"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; };
+  topdownr = derive2 { name="topdownr"; version="1.0.0"; sha256="1yshm8a6dirnmda5ydx1ksndbbcrqlp25lrj1rqxnaclqb9xn0g2"; depends=[Biobase BiocGenerics Biostrings ggplot2 Matrix MSnbase mzR S4Vectors]; };
+  trackViewer = derive2 { name="trackViewer"; version="1.14.1"; sha256="029yff299x23imqyk62cmxcsvdx34a6b4l9zp4p46iq3jb841h66"; depends=[AnnotationDbi GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges grImport Gviz htmlwidgets IRanges pbapply Rsamtools rtracklayer S4Vectors scales]; };
+  tracktables = derive2 { name="tracktables"; version="1.12.0"; sha256="02l5n4sbwzig5kdnjyhhqpiwskaf8f4pqkra3m511vrqfpmd39f3"; depends=[GenomicRanges IRanges RColorBrewer Rsamtools stringr tractor_base XML XVector]; };
+  transcriptR = derive2 { name="transcriptR"; version="1.6.0"; sha256="0malha3w4vm21bmqdvn8y9q37m0ilghbyzmwgayvx9lvy3mfnk2s"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; };
+  transcriptogramer = derive2 { name="transcriptogramer"; version="1.0.0"; sha256="08yab83dkwjwbbgf05k05c32yn74ls8xy7lm3yr39sb3nfqmra9n"; depends=[biomaRt data_table doSNOW foreach igraph limma progress RedeR snow topGO]; };
+  traseR = derive2 { name="traseR"; version="1.8.0"; sha256="1zqcz7w8pwc2vzjr137iv1bpfddh17kvmqaz7hgs9z1962704l0y"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; };
+  treeio = derive2 { name="treeio"; version="1.2.1"; sha256="1m36jqdn9png95zy0n19x4p6ggc8f9sz9708l1kf8as8bhan9rlx"; depends=[ape ggplot2 jsonlite magrittr rvcheck]; };
+  trena = derive2 { name="trena"; version="1.0.0"; sha256="0b7bwm5xfav3m0gnz4mnc6959ha0larqpzlny3r8kxj4gx6cql4j"; depends=[AnnotationDbi BiocParallel biomaRt Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 DBI flare GenomicRanges glmnet lassopv MotifDb org_Hs_eg_db randomForest RMySQL RPostgreSQL RSQLite SNPlocs_Hsapiens_dbSNP150_GRCh38 stringr vbsr]; };
+  triform = derive2 { name="triform"; version="1.20.0"; sha256="09hlnkrbzgk0vn1jcbja2i0hv54pfr2nzf33ik0rabrvv75zhb46"; depends=[BiocGenerics IRanges yaml]; };
+  trigger = derive2 { name="trigger"; version="1.24.0"; sha256="16r7b0wy37pbylz9ch6516nygpxrb31qm42i8amh04jy60zw64rw"; depends=[corpcor qtl qvalue sva]; };
+  trio = derive2 { name="trio"; version="3.16.0"; sha256="1bw0cy95qrzmg6qiy9j8n4ydi734z3q78l1pnaxagdk1ji5ab577"; depends=[]; };
+  triplex = derive2 { name="triplex"; version="1.18.0"; sha256="0x74ykqkjhbbarzgkdba090lw61n3wzpy4izsnnbawix96wqy6dx"; depends=[Biostrings GenomicRanges IRanges S4Vectors XVector]; };
+  tspair = derive2 { name="tspair"; version="1.36.0"; sha256="079wj12v6x5df2cvmhwg241042h6lgbky4hpa36b3pd7z6pjsq6w"; depends=[Biobase]; };
+  tweeDEseq = derive2 { name="tweeDEseq"; version="1.24.0"; sha256="1ms9psb5xagkxam117iksb1fj815jdlymddhlf3kv6hgyj4bx793"; depends=[cqn edgeR limma MASS]; };
+  twilight = derive2 { name="twilight"; version="1.54.0"; sha256="0b7k6dw23814qgzwqxrvpaj3f22fmkivd32scspf4i2rzm33dh53"; depends=[Biobase]; };
+  twoddpcr = derive2 { name="twoddpcr"; version="1.2.1"; sha256="0d8i2vr3db16nndgw4sy0kmkx7517pykvp48jsrw26n38gbbmvx0"; depends=[class ggplot2 hexbin RColorBrewer S4Vectors scales shiny]; };
+  tximport = derive2 { name="tximport"; version="1.6.0"; sha256="1gyqcm91hxg1kgjqcz2qw1n56yp9pymjzs50rwcpb2893dr8sp2h"; depends=[]; };
+  uSORT = derive2 { name="uSORT"; version="1.4.0"; sha256="0zr6x9na95n055jk5csipvvd8dsf9pzqh7y4z4fhzfgj8bb2rwbv"; depends=[Biobase BiocGenerics cluster fpc gplots igraph Matrix monocle plyr RANN RSpectra VGAM]; };
+  unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.14.0"; sha256="1d6khk7d6crrlhp3plwfi0d7nxvdk02ggnm4s5s6c5s3jpk64jra"; depends=[BiocGenerics HTqPCR]; };
+  variancePartition = derive2 { name="variancePartition"; version="1.8.1"; sha256="08isp7j3dd9qii7ly8sf2glpc7x9r6dpc0ci4ix3l5diw2lq30xx"; depends=[Biobase colorRamps doParallel foreach ggplot2 gplots iterators limma lme4 MASS pbkrtest reshape2]; };
+  vbmp = derive2 { name="vbmp"; version="1.46.0"; sha256="01bzkdjpb5hv9h2pf4p4h2w19771wc5p6hvij7ywygdx560hb93p"; depends=[]; };
+  viper = derive2 { name="viper"; version="1.12.0"; sha256="1k9yfz010v1g5ap900m1skaxc7ygy20y4xdc8a2c0dgfkclnw59m"; depends=[Biobase e1071 KernSmooth mixtools]; };
+  vsn = derive2 { name="vsn"; version="3.46.0"; sha256="18y62phzirj75gg6v5l41jwybmk23ia6w7qhch0kxc4bl2rysw6j"; depends=[affy Biobase ggplot2 lattice limma]; };
+  vtpnet = derive2 { name="vtpnet"; version="0.18.0"; sha256="02nws97nmlrpzwb5jqm3fmg38mp1qdf41hzwmmprhfhsymnmc4ch"; depends=[doParallel foreach GenomicRanges graph gwascat]; };
+  vulcan = derive2 { name="vulcan"; version="1.0.0"; sha256="1yxm6yg7d65wh9rl6k5b6831y4hr5l9nnmfi0azxz1h4x1ghqbdj"; depends=[Biobase caTools ChIPpeakAnno csaw DESeq DiffBind GenomicRanges gplots locfit S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene viper wordcloud zoo]; };
+  wateRmelon = derive2 { name="wateRmelon"; version="1.22.0"; sha256="1043wwkavdkdwlps5hcqn6hi2jk8w1m1lfb8fp6i4yp82r82zn5h"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; };
+  wavClusteR = derive2 { name="wavClusteR"; version="2.11.0"; sha256="0f1lk45a9yqr0ysjq8kjpqys8qln2b8ix03nywcqnkl1lk2b5ymi"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr wmtsa]; };
+  waveTiling = derive2 { name="waveTiling"; version="1.20.0"; sha256="1dlz548vjnarz15mscmj56jp2hn810w0dy7xprxx22n51h7kb7jg"; depends=[affy Biobase Biostrings GenomeGraphs GenomicRanges IRanges oligo oligoClasses preprocessCore waveslim]; };
+  weaver = derive2 { name="weaver"; version="1.44.0"; sha256="06fg8z4gp2mabiy9jrfwkrrz1r4qzzgjk3lxj6d53ii2xhq95vy6"; depends=[codetools digest]; };
+  webbioc = derive2 { name="webbioc"; version="1.50.0"; sha256="1kg6apnhq97ypmpx6qm2f7wip81f910mjlg9kmd9zzmhnkrhqamd"; depends=[affy annaffy Biobase BiocInstaller gcrma multtest qvalue vsn]; };
+  widgetTools = derive2 { name="widgetTools"; version="1.56.0"; sha256="0xkasd8z4sy9dsb2r7k3x2vhbqh9md39bz3qqwjsz8hgl6f0ggsr"; depends=[]; };
+  wiggleplotr = derive2 { name="wiggleplotr"; version="1.2.0"; sha256="1scqvmh16y6c81qlvfa8y9z47p8wl4lccq0sm5wy4jay6zch8mn2"; depends=[assertthat cowplot dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges purrr rtracklayer S4Vectors]; };
+  xcms = derive2 { name="xcms"; version="3.0.0"; sha256="0yy45y7shh70ql8wrpr8bjqsx7i30hjqdgvwaxv4kypf4pxy7rx0"; depends=[Biobase BiocGenerics BiocParallel lattice MassSpecWavelet MSnbase multtest mzR plyr ProtGenerics RANN RColorBrewer S4Vectors]; };
+  xmapbridge = derive2 { name="xmapbridge"; version="1.36.0"; sha256="0jv07kgjh3jkk61bw92kr3s10sai427f93r5j5hjzjhn6wzpahqy"; depends=[]; };
+  xps = derive2 { name="xps"; version="1.38.0"; sha256="1xmsbjkcy04nz1npbr2bia1p4x4q6b55mmk0vqkphjl6x93dw6c8"; depends=[]; };
+  yamss = derive2 { name="yamss"; version="1.4.0"; sha256="08mq0f27if86wacck1317fhm6gchxqzbj2vj9sxasr865jdzr1r9"; depends=[BiocGenerics data_table EBImage IRanges limma Matrix mzR S4Vectors SummarizedExperiment]; };
+  yaqcaffy = derive2 { name="yaqcaffy"; version="1.38.0"; sha256="144kz9q7ahrvv5h6r96pva039s1ms2pz5rsqkx1hv1jjb19070lg"; depends=[simpleaffy]; };
+  yarn = derive2 { name="yarn"; version="1.4.0"; sha256="1gr7nwhp8gpzv6zbwh56q37bkgq1g61i1lhqsps40izwr2ib8qiv"; depends=[Biobase biomaRt downloader edgeR gplots limma matrixStats preprocessCore quantro RColorBrewer readr]; };
+  zFPKM = derive2 { name="zFPKM"; version="1.0.0"; sha256="1bj2a1m0ivnv604796d1x4cf9y2nwwbsql5k3vvv1gvjp7wlp81v"; depends=[checkmate dplyr ggplot2 SummarizedExperiment tidyr]; };
+  zinbwave = derive2 { name="zinbwave"; version="1.0.0"; sha256="0r7drhs77brk0p47kvz8s0xcwpsrgmwrqzzshs84ip1sgci41iia"; depends=[BiocParallel copula edgeR genefilter glmnet SingleCellExperiment softImpute SummarizedExperiment]; };
+  zlibbioc = derive2 { name="zlibbioc"; version="1.24.0"; sha256="1zr9hbh55hglfpy15cpxwmddxblhyb0an15953l3rbhmlh2vpy92"; depends=[]; };
 }
diff --git a/pkgs/development/r-modules/cran-packages.nix b/pkgs/development/r-modules/cran-packages.nix
index eb7cd60d88b3..c91df83d229c 100644
--- a/pkgs/development/r-modules/cran-packages.nix
+++ b/pkgs/development/r-modules/cran-packages.nix
@@ -4,7 +4,7 @@
 # Rscript generate-r-packages.R cran >new && mv new cran-packages.nix
 
 { self, derive }:
-let derive2 = derive { snapshot = "2017-11-29"; };
+let derive2 = derive { snapshot = "2018-02-20"; };
 in with self; {
   A3 = derive2 { name="A3"; version="1.0.0"; sha256="017hq9pjsv1h9i7cqk5cfx27as54shlhdsdvr6jkhb8jfkpdb6cw"; depends=[pbapply xtable]; };
   ABC_RAP = derive2 { name="ABC.RAP"; version="0.9.0"; sha256="1kdspln17v0krvahcd55vib4dv5azp60b3r1zf489x10qqbp1mxk"; depends=[]; };
@@ -12,12 +12,13 @@ in with self; {
   ABCoptim = derive2 { name="ABCoptim"; version="0.15.0"; sha256="1ih0xk88qhsmpvnxf56041wx5sk8as2f4f2gdnpnwdym9mbr9n4b"; depends=[Rcpp]; };
   ABCp2 = derive2 { name="ABCp2"; version="1.2"; sha256="1s2skkxpzss7c29i8600psgrp0hl46jcrxqrmy2b4db8hc0kcnbx"; depends=[MASS]; };
   ABHgenotypeR = derive2 { name="ABHgenotypeR"; version="1.0.1"; sha256="08cpmnaaxsm5c5bjifnfxdlvg5inrf13biqpcl2yq5zpqjmiki0l"; depends=[ggplot2 reshape2]; };
+  ABPS = derive2 { name="ABPS"; version="0.2"; sha256="1k3f5i34f4w2khkszb4qhwwcpiy7gsfh82vjr6rypwg6rx5rjclq"; depends=[kernlab]; };
   ACA = derive2 { name="ACA"; version="1.0"; sha256="0z4wz85iv5k5vw29m6xfh2v96shv314nbxkv3v3yhl77br4bmj4q"; depends=[]; };
   ACCLMA = derive2 { name="ACCLMA"; version="1.0"; sha256="1na27sp18fq12gp6vxgqw1ffsz2yi1d8xvrxbrzx5g1kqxrayy0v"; depends=[]; };
   ACD = derive2 { name="ACD"; version="1.5.3"; sha256="1a67bi3hklq8nlc50r0qnyr4k7m9kpvijy8sqqpm54by5hsysfd6"; depends=[]; };
   ACDm = derive2 { name="ACDm"; version="1.0.4"; sha256="0b4f02ga5ra66mbrm79g0bnlzmii82rks9kmxixxqgf18yhlyjil"; depends=[dplyr ggplot2 plyr Rsolnp zoo]; };
   ACEt = derive2 { name="ACEt"; version="1.8.0"; sha256="0626d6kg485xjya164wagrr5z223jvi93ywbwpdns7fkm03c0dlq"; depends=[BH MASS Rcpp RcppArmadillo]; };
-  ACMEeqtl = derive2 { name="ACMEeqtl"; version="1.4"; sha256="02hc33g35x59jn9skcspgam1qskjvwy5djrg2djl9qmwq4aj0j9k"; depends=[filematrix]; };
+  ACMEeqtl = derive2 { name="ACMEeqtl"; version="1.5"; sha256="0jcwpqr6snvzi55zn24aiqzbbjqpq0h6fiw8m0d01120pna21ks3"; depends=[filematrix]; };
   ACNE = derive2 { name="ACNE"; version="0.8.1"; sha256="0kzapsalzw6jsi990qicp4glijh5ddnfimsg5pidgbwxg4i05grl"; depends=[aroma_affymetrix aroma_core MASS matrixStats R_filesets R_methodsS3 R_oo R_utils]; };
   ACSNMineR = derive2 { name="ACSNMineR"; version="0.16.8.25"; sha256="0gh604s8qall6zfjlwcg2ilxjvz08dplf9k5g47idhv43scm748l"; depends=[ggplot2 gridExtra scales]; };
   ACSWR = derive2 { name="ACSWR"; version="1.0"; sha256="195vjrkang5cl7gwsna0aq4p0h4jym9xg9yh94bnf8vq6wf8j83n"; depends=[MASS]; };
@@ -26,7 +27,7 @@ in with self; {
   ADDT = derive2 { name="ADDT"; version="2.0"; sha256="044bb1jw2m8vwk5q8l7rlz4kqphjvy8i9d59rjg0k5q5l9vczfrp"; depends=[coneproj Matrix nlme]; };
   ADGofTest = derive2 { name="ADGofTest"; version="0.3"; sha256="0ik817qzqp6kfbckjp1z7srlma0w6z2zcwykh0jdiv7nahwk3ncw"; depends=[]; };
   ADM3 = derive2 { name="ADM3"; version="1.3"; sha256="1hg9wjdhckilqd13dr4cim4j6jsh2sdwm18i3pfmfdj8cyswm3h0"; depends=[]; };
-  ADMM = derive2 { name="ADMM"; version="0.1.1"; sha256="0zdbnjqxwi78v6dn5aq0dschd1qnrxm6j49qj4k48dg4wmq9p21k"; depends=[Matrix Rcpp RcppArmadillo]; };
+  ADMM = derive2 { name="ADMM"; version="0.2.1"; sha256="1km9xqglx77nizix9cik7f4y3q0nybff3r6xw9pn1k1kcmm9qjhj"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; };
   ADMMnet = derive2 { name="ADMMnet"; version="0.1"; sha256="15f1zhgv7xai954qz2ahj4kpxyvr2svxpmybz7j43bhjpkq72dmq"; depends=[Matrix Rcpp RcppEigen]; };
   ADPF = derive2 { name="ADPF"; version="0.0.1"; sha256="1n7302xx77ngvp9i2h582i1mqslzllcdr0bn3pl2zk9jd8k97p7n"; depends=[]; };
   ADPclust = derive2 { name="ADPclust"; version="0.7"; sha256="0s47cpsjykn7imsssa9w9b6g9d1sz2yah78yqzxmh0i3lqd757c1"; depends=[cluster dplyr fields knitr]; };
@@ -41,7 +42,7 @@ in with self; {
   AHR = derive2 { name="AHR"; version="1.4.2"; sha256="15khncbbnpbvj6rcn6rklzhv5a0mmfyjljv77bsx96zfis7mk2d7"; depends=[etm MASS Rcpp RcppArmadillo survival]; };
   AICcmodavg = derive2 { name="AICcmodavg"; version="2.1-1"; sha256="0y2lgvy0a78wdx4xcq85fkhl4hyvjdljrj199mibisfgkh61amb1"; depends=[lattice MASS Matrix nlme survival unmarked VGAM xtable]; };
   AID = derive2 { name="AID"; version="2.3"; sha256="0p3cjbd6kxdy5igmgzkc2bd3w0p0w1jb9jkn9n0id5lv44b5gskj"; depends=[ggplot2 MASS nortest psych tseries]; };
-  AIG = derive2 { name="AIG"; version="0.1.7"; sha256="0fg2g74cg7nsgsfvglr91f0bcqnszs1c8vr1zkybq2sgy1kcpnaa"; depends=[dplyr magrittr mgcv rgl]; };
+  AIG = derive2 { name="AIG"; version="0.1.8"; sha256="19vw3gycj0i41g08jaf4jh1nff7d0dpqga1hs20gs3n02cxim6mg"; depends=[dplyr magrittr mgcv rgl]; };
   AIM = derive2 { name="AIM"; version="1.01"; sha256="11lkfilxk265a7jkc1wq5xlgxa56xhg302f1q9xb7gmjnzdigb21"; depends=[survival]; };
   ALA4R = derive2 { name="ALA4R"; version="1.5.6"; sha256="0fj5y6z179glhc2jj3ksd5w29xmlqm71n23hp1vynrza70fz0gna"; depends=[assertthat digest httr jsonlite plyr RCurl sp stringr wellknown]; };
   ALDqr = derive2 { name="ALDqr"; version="1.0"; sha256="0gk8hxh4p0fi47sf1zsvvxxbzp38vzk60wh8hmc63phnjab6qkv4"; depends=[HyperbolicDist sn]; };
@@ -62,9 +63,10 @@ in with self; {
   ANLP = derive2 { name="ANLP"; version="1.3"; sha256="1m1jnfaqny6qprgyk4f3naan5i5cildawv322h6mc25nypwl12m4"; depends=[dplyr qdap RWeka tm]; };
   ANN2 = derive2 { name="ANN2"; version="1.5"; sha256="17b0dv1dl4kni7yvrrwk65cadk6f7qk7505r27j9v530pffyv1k3"; depends=[Rcpp RcppArmadillo robustbase]; };
   ANOM = derive2 { name="ANOM"; version="0.5"; sha256="14nfy9xplbabfprwxz5fvx26nmqhp657vr6d90dc8vk8ds63ckiz"; depends=[ggplot2 MCPAN multcomp nparcomp SimComp]; };
-  ANOVAreplication = derive2 { name="ANOVAreplication"; version="1.1.2"; sha256="035r0kn0jzkgzvk113m098zjmy78pddjkvn4h7lgliamrzaky1xx"; depends=[quadprog shiny]; };
+  ANOVAreplication = derive2 { name="ANOVAreplication"; version="1.1.3"; sha256="1cmps21lrmk6lh6gx0q9fz2736q7cibfcisvir6hnik3ablv70bn"; depends=[quadprog shiny]; };
   APCanalysis = derive2 { name="APCanalysis"; version="1.0"; sha256="11snn5i8zyjpzf58ica762fpp14v7x5h8a8iwx4s4v81pgvlx862"; depends=[]; };
-  APML0 = derive2 { name="APML0"; version="0.5"; sha256="1zz47vwmijq637ah20sj61zsignqcnsisidpx41dnaa06nbkp77p"; depends=[Matrix Rcpp RcppEigen]; };
+  APML0 = derive2 { name="APML0"; version="0.7"; sha256="1ivlyljyllkd53y3ckar7mrdykmd8fz3sg8i1xgfygrcnq79qz0i"; depends=[Matrix Rcpp RcppEigen]; };
+  APPEstimation = derive2 { name="APPEstimation"; version="0.1.1"; sha256="1bg9ma4i3k3xdgyk2h4f368gqnczvlhvjw4114iznmrv1wl4g25c"; depends=[densratio]; };
   APSIM = derive2 { name="APSIM"; version="0.9.2"; sha256="0yyjz1kyvqpw9dh71ls2lf44gbb6r7bp9a22mr3z68k89azps5rc"; depends=[data_table lubridate plyr RSQLite sirad stringr]; };
   APSIMBatch = derive2 { name="APSIMBatch"; version="0.1.0.2374"; sha256="0j44ijq1v1k60lka9nmw8m1jfjw7pidny9bvswqy5v82gzmwl29d"; depends=[]; };
   APfun = derive2 { name="APfun"; version="0.1.2"; sha256="0qw769ifcc7g9jq8ba2sxghcck52cspj3rpg8pkj2i185vg0lw77"; depends=[maptools raster rgdal sp yesno]; };
@@ -78,12 +80,13 @@ in with self; {
   ARTP = derive2 { name="ARTP"; version="2.0.4"; sha256="1f6ay9lyaqsc33b0larb8v6imp5adaycya84wif2sg32rv4gx3yl"; depends=[]; };
   ARTP2 = derive2 { name="ARTP2"; version="0.9.32"; sha256="12mrxssjcj08svdsrxv2nm53mzsgy1k0whd5zzy6fz327bjyqsrz"; depends=[data_table Formula]; };
   ARTool = derive2 { name="ARTool"; version="0.10.4"; sha256="1malrjv4myk9nj3dndgpzscfhky4y6lj8xbfg8h2b29g7s2k846q"; depends=[car dplyr lme4 magrittr plyr]; };
-  ASICS = derive2 { name="ASICS"; version="1.0.0"; sha256="0hzdffy8vyf5wvk8ba8znl9799084ndz3q7nrvdqsvr2c9dsdff2"; depends=[doParallel foreach ggplot2 plyr quadprog zoo]; };
+  ASICS = derive2 { name="ASICS"; version="1.0.1"; sha256="0axjq2a99kl6qk05w5r9ddx3954m60739miarbwadlqwnsd5lkqk"; depends=[doParallel foreach ggplot2 plyr quadprog zoo]; };
   ASIP = derive2 { name="ASIP"; version="0.3.2"; sha256="0zrn3hnn46zxmvchicyzy7zz2jnv8y1249a6sdi3w9rw2d8q025g"; depends=[gdalUtils raster rgdal]; };
   ASMap = derive2 { name="ASMap"; version="1.0-2"; sha256="0fhivq5i2py79jkwfms0my77p9x8lrkn5vn1lwbsawfkyar4dvkq"; depends=[fields gtools lattice qtl RColorBrewer]; };
   ASPBay = derive2 { name="ASPBay"; version="1.2"; sha256="0b1qpyvmj7z10ixrmdxp42bj9s72c1l9rihzmv9p58f12a5aznjz"; depends=[hexbin Rcpp RcppArmadillo]; };
   ASSISTant = derive2 { name="ASSISTant"; version="1.2-3"; sha256="072lmvmdi5yfyfda42vs556ciwj2rnka02isnknk6czir3947nck"; depends=[mvtnorm R6]; };
   ATE = derive2 { name="ATE"; version="0.2.0"; sha256="1i46ivb7q61kq11z9v1rlnwad914nsdjcz9bagqx17vjk160mc0a"; depends=[]; };
+  ATR = derive2 { name="ATR"; version="0.1-0"; sha256="0ljrpix3ksi0v38sfb25s2dlfj1yjbvwcz147dk2v2c24cn3r816"; depends=[partykit]; };
   ATmet = derive2 { name="ATmet"; version="1.2"; sha256="047ibxxf5si45zw22zy8a1kpj36q0pd3bsmxwvn0dhf4h65ah0zz"; depends=[DiceDesign lhs metRology msm sensitivity]; };
   AUC = derive2 { name="AUC"; version="0.3.0"; sha256="0ripcib2qz0m7rgr1kiz68nx8f6p408l1ww7j78ljqik7p3g41g7"; depends=[]; };
   AUCRF = derive2 { name="AUCRF"; version="1.1"; sha256="00d7jcg2dyvf7sc9w7vxxd85m7nsbcmfqsavrv236vxfpfc9yn7i"; depends=[randomForest]; };
@@ -119,26 +122,27 @@ in with self; {
   AlgebraicHaploPackage = derive2 { name="AlgebraicHaploPackage"; version="1.2"; sha256="1krm5cx609sv2p0g3xm5jaiqs9li06v717lw7ywjvx7myc9x4c07"; depends=[]; };
   AlignStat = derive2 { name="AlignStat"; version="1.3.1"; sha256="1x9nlf3z6rpfca3k3cqm673sid418mnl44df9v93nyj5dpd70ylc"; depends=[ggplot2 Rcpp reshape2 seqinr]; };
   AllPossibleSpellings = derive2 { name="AllPossibleSpellings"; version="1.1"; sha256="0ksfm2pfjka3yjgcd257v7sns1niaylsfxvhhh2jwdi016cpdw10"; depends=[]; };
-  AlleleRetain = derive2 { name="AlleleRetain"; version="1.3.4"; sha256="1jpn497plvgv1f9nwfpp5n765n7jr43cs5kz807a3fld8sjy0x2i"; depends=[]; };
+  AlleleRetain = derive2 { name="AlleleRetain"; version="2.0.2"; sha256="0b6h5giskqbjbrk8nf29i75wrhxsjw1c87laiqzrpbp9n717bl20"; depends=[]; };
   AlphaVantageClient = derive2 { name="AlphaVantageClient"; version="0.0.1"; sha256="095m850v945lw7i3qd812p28srdb5hdk9h52zf6bkr166zai1ni0"; depends=[httr xts]; };
   Amelia = derive2 { name="Amelia"; version="1.7.4"; sha256="0w6532s5xr7pw47zqhhymql7i68c4lralvw1gc26l9d4c7ib00fd"; depends=[foreign Rcpp RcppArmadillo]; };
   AmericanCallOpt = derive2 { name="AmericanCallOpt"; version="0.95"; sha256="1nhy44j5bmmjsp6g79nrn741rzzxikhdnxk4wwbdj9igcc1bs573"; depends=[]; };
-  AmesHousing = derive2 { name="AmesHousing"; version="0.0.2"; sha256="0grms331mndk86nsyjp9why1ikjx7ycnf9hccvwkxkf86n0519w9"; depends=[dplyr magrittr]; };
+  AmesHousing = derive2 { name="AmesHousing"; version="0.0.3"; sha256="1fr01ka8x8gdnky6cbd2bjlh1lx71gzq440zsknn9kxvf01s6pxm"; depends=[dplyr magrittr]; };
   AmmoniaConcentration = derive2 { name="AmmoniaConcentration"; version="0.1"; sha256="05pnwfji9l9az4jvni6jy7cayzg5pbspz82a63kmj6rgibn4ywvn"; depends=[]; };
   AmostraBrasil = derive2 { name="AmostraBrasil"; version="1.2"; sha256="06y555gl9g89gygrv1rhg8j1bhb38m09mvvw67wvwhdl56j0fqbd"; depends=[foreign RCurl rgdal RJSONIO sp stringr]; };
   AmpliconDuo = derive2 { name="AmpliconDuo"; version="1.1"; sha256="1vqpahavsksphxjyhd94dghg9ddskbfbs5vl5qcwl3jkjfvl7lwy"; depends=[ggplot2 xtable]; };
   AmyloGram = derive2 { name="AmyloGram"; version="1.1"; sha256="1xdi3i3nw4fzj4d040r55f0gid72gy3vbz5nbdrvapl97zk3kp8c"; depends=[biogram ranger seqinr shiny]; };
   AnDE = derive2 { name="AnDE"; version="1.0"; sha256="1yil8ab50wvlqmdla9kmfba8vfgy5r694r6igb58s6vnmld78yf2"; depends=[discretization foreign functional stringr]; };
+  AnaCoDa = derive2 { name="AnaCoDa"; version="0.1.1"; sha256="1v8jlyzqp9k084lzmaihp5nh7mybbgnnxnbbfkydq24b9wskfd4b"; depends=[Rcpp]; };
   AnalyzeFMRI = derive2 { name="AnalyzeFMRI"; version="1.1-16"; sha256="1mbjb682ns5230jd3vcvd6x4gnn9hpbmjd7r8120y4sp2g733b0f"; depends=[fastICA R_matlab]; };
   AnalyzeTS = derive2 { name="AnalyzeTS"; version="2.2"; sha256="0ll4g8yzxhricz56vin8hhyplrmvjmkwfldya41vz6y6bwhywnmb"; depends=[MASS TSA tseries TTR urca]; };
   AncestryMapper = derive2 { name="AncestryMapper"; version="2.0"; sha256="1fr2y1a5rn7rq8aly94f618kywix32jwysi70nfhaqx8hf4zzprb"; depends=[svd]; };
-  AnglerCreelSurveySimulation = derive2 { name="AnglerCreelSurveySimulation"; version="0.2.1"; sha256="100mbmdllk6c32j75jviz2k9kmwca3jvrqb95a555alfcpkfim8c"; depends=[]; };
+  AnglerCreelSurveySimulation = derive2 { name="AnglerCreelSurveySimulation"; version="1.0.0"; sha256="0vkb50v3by5z7qmaqpdb81zmbz23f315k09mpfy7qwsjfdgcpshv"; depends=[dplyr ggplot2]; };
   AnnotLists = derive2 { name="AnnotLists"; version="1.2"; sha256="1g2khb2ggniwg2zcjamsm3bxyrl2zabvk540b5vyy9am9k83m1g9"; depends=[]; };
   AnnotationBustR = derive2 { name="AnnotationBustR"; version="1.1"; sha256="1pdwb4zmvirbn3aikd66djhzwga18w50krgn43mlw5dpa9c7fvhv"; depends=[ape seqinr]; };
   AnnuityRIR = derive2 { name="AnnuityRIR"; version="1.0-0"; sha256="0yvfqzwhm5nhywfhzkxkfm07c0qi6z21j1cdaypz89qn567aj1d9"; depends=[actuar EnvStats fitdistrplus mc2d tseries]; };
   AntAngioCOOL = derive2 { name="AntAngioCOOL"; version="1.2"; sha256="1krwms0y3xppc2y4m0az51wcbh4jq7mlr0jwinp66w8gh4k3qnp2"; depends=[caret rJava rpart RWeka]; };
   AntWeb = derive2 { name="AntWeb"; version="0.7"; sha256="1ykfg3zzjdvjppr2l4f26lx00cn5vaqhhz1j1b5yh113ggyl40qw"; depends=[assertthat httr leafletR plyr rjson]; };
-  AnthropMMD = derive2 { name="AnthropMMD"; version="2.3.0"; sha256="1knxq2r913bgjfpj6j47xan047h0iypv2wp23xn0fimmpfhjsvbn"; depends=[MASS shiny]; };
+  AnthropMMD = derive2 { name="AnthropMMD"; version="2.3.3"; sha256="1q8pjxlrba7dna647pkzyj41scq8xghx5h7ac3jamhrkdppf5fdk"; depends=[MASS shiny]; };
   Anthropometry = derive2 { name="Anthropometry"; version="1.9"; sha256="1d1grh952kfpanz4vpvdbnx4yn42kkc6z78cc601l70azar2p7zg"; depends=[archetypes biclust cluster depth FNN ICGE nnls rgl shapes]; };
   Aoptbdtvc = derive2 { name="Aoptbdtvc"; version="0.0.2"; sha256="1bygvf8vgzz3wa4485x2xxpk784zmw1nwsjjjysm12brrldh8zzh"; depends=[lpSolve MASS]; };
   ApacheLogProcessor = derive2 { name="ApacheLogProcessor"; version="0.2.2"; sha256="01h8hi76nlwn9hnfyvzyg2d25s2r0vgpl5rz37yqkhjs5xr3rpyi"; depends=[doParallel foreach stringr]; };
@@ -177,15 +181,18 @@ in with self; {
   BALCONY = derive2 { name="BALCONY"; version="0.1.8"; sha256="0bnhwz319dy1wc9g2sxb5w2hn8ypzxgaghrg4r82yjl5xig8qmd5"; depends=[Rpdb scales seqinr]; };
   BAMBI = derive2 { name="BAMBI"; version="1.1.1"; sha256="1jzvsaf9cn28ny40vg0wlvdqz6f4i7n6iyym8s0aj58aiazwsmh5"; depends=[label_switching Rcpp RcppArmadillo]; };
   BAMMtools = derive2 { name="BAMMtools"; version="2.1.6"; sha256="01mb40w3g0xy93pl9064ky8kd46sa7qlz6by1r6kchcfhajx8plv"; depends=[ape gplots Rcpp]; };
+  BANEScarparkinglite = derive2 { name="BANEScarparkinglite"; version="0.1.1"; sha256="1xs65drkpd1zmrvyrv0kndd5z5q4y425524w6mrh96qya9qjrmsx"; depends=[dplyr httr lubridate RCurl readr rvest XML xml2 zoo]; };
   BANFF = derive2 { name="BANFF"; version="2.0"; sha256="1c5wdwqqvkcm9910lhd387snd7myv9qzs9vfk87vzp3di7hdi4l6"; depends=[coda doParallel DPpackage flexmix foreach GGally igraph mclust network pscl truncnorm]; };
-  BANOVA = derive2 { name="BANOVA"; version="1.0.0"; sha256="0yqvdsimryklwgqqn4bmynyaqhw47sjl0dnsf80l8g9g5bvf321y"; depends=[coda rjags rstan runjags]; };
-  BART = derive2 { name="BART"; version="1.3"; sha256="1jlch8r9jklfjjlmjmdxsjw8lsqzc1wmgr4b94phlj4cgxxbc8ri"; depends=[Rcpp survival]; };
+  BANOVA = derive2 { name="BANOVA"; version="1.1.1"; sha256="11cvf7wjip1vn5qn9hwxvdh98i8li9ijydfywf2ks2hls2430qbk"; depends=[coda rjags rstan runjags]; };
+  BART = derive2 { name="BART"; version="1.5"; sha256="0vhyxyp0bbbkyymkwhll8jck3n4mybglshmfs9bycn4xmmm5rq8j"; depends=[Rcpp survival]; };
   BAS = derive2 { name="BAS"; version="1.4.7"; sha256="0rpgfzwc41clkdf20mh6wdd2fari84rfgfgzxw04lb3b3s7hz8y4"; depends=[]; };
   BASIX = derive2 { name="BASIX"; version="1.1"; sha256="18dkvv1iwskfnlpl6xridcgqpalbbpm2616mvc3hfrc0b26v01id"; depends=[]; };
   BASS = derive2 { name="BASS"; version="0.2.2"; sha256="1q3sihp2iv1ikggzgd2k3vh2myz8bz31rzlaavw0n84d0h1zjxy2"; depends=[]; };
+  BASiNET = derive2 { name="BASiNET"; version="0.0.2"; sha256="1qik3r52hygxldw3sw0sln7yw7z0bmybavf0kf9fmpkyir0z0xvn"; depends=[Biostrings igraph randomForest rgl rmcfs RWeka]; };
   BAT = derive2 { name="BAT"; version="1.5.6"; sha256="0m6yfxymhzi8n2l421ngy6cz3qa5v7yrd1jhpi8ymlnf8dysd57x"; depends=[nls2 raster spatstat vegan]; };
   BAYESDEF = derive2 { name="BAYESDEF"; version="0.1.0"; sha256="030xskgqqg0n85mphjv32ks4ysvxb36f6ayy0176gps14jhmhcp7"; depends=[glmnet gWidgets readxl REdaS]; };
   BAYSTAR = derive2 { name="BAYSTAR"; version="0.2-9"; sha256="0crillww1f1jvhjw639sf09lpc3wpzd69milah143gk9zlrkhmz2"; depends=[coda mvtnorm]; };
+  BAwiR = derive2 { name="BAwiR"; version="1.0"; sha256="0bic9f84cnjka6vk55icjviqr206fmv7lnihvdksnbghgcya890w"; depends=[Anthropometry dplyr ggplot2 ggthemes hrbrthemes httr lubridate magrittr plotly plyr purrr reshape2 rvest rworldmap scales stringi stringr tidyr xml2]; };
   BB = derive2 { name="BB"; version="2014.10-1"; sha256="1lig3vxhyxy8cnic5bczms8pajmdvwr2ijad1rkdndpglving7x0"; depends=[quadprog]; };
   BBEST = derive2 { name="BBEST"; version="0.1-6"; sha256="1hvgi3679ixpq0c5qbxhkp1j0953k3lklglgxrq9mz2ry6z9n038"; depends=[DEoptim ggplot2 reshape2 shiny wmtsa]; };
   BBMM = derive2 { name="BBMM"; version="3.0"; sha256="1cvv786wf1rr5906qg1di2krrv5jgw3dnyl8z2pvs8jyn0kb3fkj"; depends=[]; };
@@ -199,30 +206,30 @@ in with self; {
   BCE = derive2 { name="BCE"; version="2.1"; sha256="0dqp08pbq7r88yhvlwgzzk9dcdln7awlliy5mfq18j5jhiy7axiz"; depends=[FME limSolve Matrix]; };
   BCEA = derive2 { name="BCEA"; version="2.2-5"; sha256="0jiizwnxycbz9x8fmkcw3rcjkgg5b9fawyddf8swvx23cnfm6z8z"; depends=[MASS]; };
   BCEE = derive2 { name="BCEE"; version="1.2"; sha256="08jsnsy7l182n0gy2jy0l9a7grr62g57gz3217fzapk2im2q648b"; depends=[BMA leaps Rcpp RcppArmadillo]; };
-  BCEs0 = derive2 { name="BCEs0"; version="1.1-1"; sha256="1ipg8xliqnpfa4ga9r0gqf5sfa9gass4hvrlgxazs5hb18fpsl91"; depends=[]; };
   BCRA = derive2 { name="BCRA"; version="1.0"; sha256="1bbxh1kf35h31c4k565kk6grdhp5pnn8vr3nr6vnp32dp4pc05zh"; depends=[]; };
   BCSub = derive2 { name="BCSub"; version="0.5"; sha256="0c8dlxsx23qfyygmajg2amj78ax01kb3808d9hvy7g3hkgp2i2fp"; depends=[MASS mcclust nFactors Rcpp RcppArmadillo]; };
   BCellMA = derive2 { name="BCellMA"; version="0.3.4"; sha256="1njprs7ksv0w18ffs0agz0290aa2akw48225iaa3bjhbl08dpidl"; depends=[ggplot2 reshape2]; };
   BCgee = derive2 { name="BCgee"; version="0.1"; sha256="0ad0dj2ymgvkmcmq3jlpmn0pgigdql0xgvcwsbpdydv33a6snr04"; depends=[]; };
+  BClustLonG = derive2 { name="BClustLonG"; version="0.1.2"; sha256="0w35pwv3y00pmi4qjnzii3q44k7lk13x0cmh1zq3cl42gpi31p7f"; depends=[lme4 MASS mcclust Rcpp RcppArmadillo]; };
   BDWreg = derive2 { name="BDWreg"; version="1.2.0"; sha256="07j6dy69q1as1nwgp2790wzpzmjich2256cddhl7n3h2rs1dja74"; depends=[coda doParallel DWreg foreach MASS]; };
-  BDgraph = derive2 { name="BDgraph"; version="2.43"; sha256="1wqc09z6czl9b34yxj7hpf2f16q47dfi44vzmbssqwzai3h26hg4"; depends=[igraph Matrix]; };
-  BEACH = derive2 { name="BEACH"; version="1.1.2"; sha256="10533ac575mcw9mv1lf3dgjjaf1hgzv3yn7ys9qi6b2k5fynhsg0"; depends=[devtools DT haven plyr readxl rJava rtf sas7bdat SASxport shiny WriteXLS xtable]; };
+  BDgraph = derive2 { name="BDgraph"; version="2.44"; sha256="055pmjf8pgfqih6bxjj34gz7gj78y4z3kldy561z7mi443kwphq6"; depends=[igraph Matrix]; };
   BEDASSLE = derive2 { name="BEDASSLE"; version="1.5"; sha256="1bz3lr0waly9vj9adwhmgs3lq7zjdkcbvm3y9rnn72qlrwmv5fbn"; depends=[emdbook MASS matrixcalc]; };
   BEDMatrix = derive2 { name="BEDMatrix"; version="1.4.0"; sha256="0aha33skksh45fx248lx6v8cxwgkiripw3avspb8arbld9rmqwxn"; depends=[BH crochet Rcpp]; };
   BEQI2 = derive2 { name="BEQI2"; version="2.0-0"; sha256="19q29kkwww5hziffkm2yx7n4cpfcsyh0z4mljdcnjkwfp732sjig"; depends=[jsonlite knitr markdown plyr reshape2 xtable]; };
   BEST = derive2 { name="BEST"; version="0.5.0"; sha256="178vn0ps6nr7qjayavnvmbyx6gq57dni5llsncl89kkz633mb2hg"; depends=[coda HDInterval rjags]; };
   BETS = derive2 { name="BETS"; version="0.3.3"; sha256="09xgf356casig06q7jys5h55y8kj0ndnr7mkymgzcvni7djc5gq3"; depends=[DBI DT dygraphs forecast foreign ggplot2 grnn htmltools httr lubridate miniUI plotly rjson rmarkdown RMySQL rstudioapi rvest seasonal shiny stringr urca webshot xml2 zoo]; };
   BGData = derive2 { name="BGData"; version="1.0.0"; sha256="0xd7xpnvhpyvv6caxyif7wa25llvrnyzmmk4z6rp7absjqbz2alc"; depends=[BEDMatrix bigmemory bit ff LinkedMatrix symDMatrix]; };
+  BGGE = derive2 { name="BGGE"; version="0.6.1"; sha256="1ndn4cj9mrkx2mrlh2dgyy3lpx526fmg91zqgvdcbvn99r5sl17j"; depends=[]; };
   BGLR = derive2 { name="BGLR"; version="1.0.5"; sha256="14a979rnasaklkfafzpkhr6mqv0ga7fsfxq63scpnlwa2aasgn83"; depends=[]; };
   BGPhazard = derive2 { name="BGPhazard"; version="1.2.3"; sha256="1yp92y5y3xh0hb1ring6jrma8g4q6210hm9572j8ji1jkafzxjw1"; depends=[survival]; };
   BGSIMD = derive2 { name="BGSIMD"; version="1.0"; sha256="0xkr56z8l72wps7faqi5pna1nzalc3qj09jvd3v9zy8s7zf5r7w4"; depends=[]; };
-  BH = derive2 { name="BH"; version="1.65.0-1"; sha256="0n6byzrvl1w4hjdxz479q4a7w1118f9ckqc4gqydq7lgzs5agfl2"; depends=[]; };
+  BH = derive2 { name="BH"; version="1.66.0-1"; sha256="14kab6wp0c27d8x4jqyf065p4bj210s9b67c0bfsfjnp29aypn8p"; depends=[]; };
   BHH2 = derive2 { name="BHH2"; version="2016.05.31"; sha256="1m4fcx979nbm97hi89vbjjix0sx6qhdzs486risck9bi7yzih5k4"; depends=[]; };
   BHMSMAfMRI = derive2 { name="BHMSMAfMRI"; version="1.1"; sha256="1qygizn2np9amkm1f1332zp9ab9ky423plr9lahgwzdxn1c2c5c2"; depends=[AnalyzeFMRI fmri wavethresh]; };
   BIEN = derive2 { name="BIEN"; version="1.2.2"; sha256="11bqbkw6v4yvlvpv0bhmn5q7ady12hmp9ziak5jzsc7p4d8azd5r"; depends=[ape DBI rgdal rgeos RPostgreSQL sp]; };
   BIFIEsurvey = derive2 { name="BIFIEsurvey"; version="2.3-18"; sha256="0cf5nbqcfvx76v1iia2d48j6dg9sqscmjrl0r835xbssiv9xk5w4"; depends=[miceadds mitools Rcpp RcppArmadillo survey TAM]; };
-  BIGDAWG = derive2 { name="BIGDAWG"; version="1.16"; sha256="04l0x8g81ij7varj0s40fsmajfkr630s70f0brv41s4zcznv25sz"; depends=[haplo_stats knitr rmarkdown XML]; };
-  BIGL = derive2 { name="BIGL"; version="1.1.0"; sha256="18qsdw3nb3wjrzdr3yg8kfqxbv761c5gc6qg937k8g87wiagrplp"; depends=[ggplot2 MASS minpack_lm numDeriv progress rgl robustbase scales]; };
+  BIGDAWG = derive2 { name="BIGDAWG"; version="2.1"; sha256="0zvy5sl94qi20gdrnxb2lmadfy7p0wqfngjsf6jc2cgwyzk4gnrj"; depends=[haplo_stats httr knitr rmarkdown XML]; };
+  BIGL = derive2 { name="BIGL"; version="1.1.1"; sha256="008f3x0hkmifra1wcv56hxjjf2rqc9qxsbpi23aq4pgk7mxdaax7"; depends=[ggplot2 MASS minpack_lm numDeriv progress rgl robustbase scales]; };
   BIOM_utils = derive2 { name="BIOM.utils"; version="0.9"; sha256="0xckhdvf15a62awfk9rjyqbi6rm7p4awxz7vg2m7bqiqzdll80p7"; depends=[]; };
   BIOMASS = derive2 { name="BIOMASS"; version="1.1"; sha256="1qawp10hw7xhqyg9bdwvgxbksiwhga7h6vwp8m7q30ibwfv5kamg"; depends=[httr jsonlite minpack_lm msm raster]; };
   BIOdry = derive2 { name="BIOdry"; version="0.5"; sha256="0isvqs2bgirxwb7b1dbn70zfx9b4mw7fp33fwmxq0dx6k1r4f87g"; depends=[ecodist nlme]; };
@@ -237,6 +244,7 @@ in with self; {
   BMA = derive2 { name="BMA"; version="3.18.7"; sha256="095iwlbjklg1pkp5jiw0srg7jh9cn50g8z4namrs4xsmlh7if65z"; depends=[inline leaps robustbase rrcov survival]; };
   BMAmevt = derive2 { name="BMAmevt"; version="1.0.1"; sha256="1krx8isj2wp3panjcbc2ysrc2pxz2casj12qq9p18imaa326l53y"; depends=[coda]; };
   BMN = derive2 { name="BMN"; version="1.02"; sha256="12gyq01cn6a9ixqgki1ihx5jrp2gw6jdj7q210rb12xlvj3p6x7w"; depends=[]; };
+  BMRBr = derive2 { name="BMRBr"; version="0.1.0"; sha256="1z54annplzydnxvwd0rkhcw5rmfx8r99k28ld5rgh22xq3zdq825"; depends=[rvest xml2]; };
   BMRV = derive2 { name="BMRV"; version="1.32"; sha256="1j1cwjk3l7f06nqdwrqdyhzm43bb8hj5wgdd14zc1grxyfc9ya95"; depends=[BH]; };
   BMS = derive2 { name="BMS"; version="0.3.4"; sha256="0z3mk1xd1fphf80kdbashkn04jwsr2bghms4d7nav3pw73q41wql"; depends=[]; };
   BMT = derive2 { name="BMT"; version="0.1.0.3"; sha256="1vdah5bsn41s2qriq15xi7dw9qzngaacmn5gk6yc7hi89dwyy3yj"; depends=[fitdistrplus partitions]; };
@@ -244,6 +252,7 @@ in with self; {
   BMhyd = derive2 { name="BMhyd"; version="1.2-8"; sha256="14pv5f621zq5x9i408zjm8k80hcsabkjpdf86gk3ylgw5yqcivrx"; depends=[ape corpcor geiger mvtnorm numDeriv phylobase phytools TreeSim]; };
   BMisc = derive2 { name="BMisc"; version="1.1.1"; sha256="1ckliy7pnpx47dqmd6msd5496ddrj05j49al866av5zg9qsr7z4s"; depends=[formula_tools]; };
   BNDataGenerator = derive2 { name="BNDataGenerator"; version="1.0"; sha256="17zi83jhpn9ygavkpr9haffvd4622sca18jzzxxxmfq0ilrj201g"; depends=[]; };
+  BNN = derive2 { name="BNN"; version="1.0.2"; sha256="13h9xqfdqnc9d8brx1xlmvb4nrkpwncwjz98y7i3wijih85wkikd"; depends=[mvtnorm]; };
   BNPMIXcluster = derive2 { name="BNPMIXcluster"; version="1.2.4"; sha256="06s0cs3anbby93n7pjcin9195agfzfq9im6f9k7ih3cbg8mzfaqy"; depends=[gplots MASS matrixcalc mvtnorm plyr Rcpp RcppArmadillo truncnorm]; };
   BNPMediation = derive2 { name="BNPMediation"; version="0.1.0"; sha256="0bfsayhhhf60qr8nvs4yhshnb7ank70529abpqdxb506ni67pny1"; depends=[condMVNorm DPpackage mnormt]; };
   BNPTSclust = derive2 { name="BNPTSclust"; version="1.1"; sha256="1zmxwg6zn3nqqm1sw2n4pvq47mv7ygb4lf1c6yhn3xaf1rqmf26s"; depends=[MASS mvtnorm]; };
@@ -257,6 +266,7 @@ in with self; {
   BSDA = derive2 { name="BSDA"; version="1.2.0"; sha256="0gs33yyca45jd4f5k5f7qid4ayw2rnl2wl7a6m7vf39dfx7ympm2"; depends=[e1071 lattice]; };
   BSGS = derive2 { name="BSGS"; version="2.0"; sha256="08m8g4zbsp55msqbic4f17lcry07mdn0f5a61zdcy2msn2ihzzf9"; depends=[batchmeans MASS plyr pscl]; };
   BSGW = derive2 { name="BSGW"; version="0.9.2"; sha256="1q6qvm9yxh35wywrzs3kr31jsa0bmbwrqh0r3qjc0dzi6q8n6pjy"; depends=[doParallel foreach MfUSampler survival]; };
+  BSPADATA = derive2 { name="BSPADATA"; version="1.0"; sha256="1g709i0icxlxq2ljb2sm5iyc8ljqxadi62xc4mg702fsgl0x5ny9"; depends=[mvtnorm pscl spdep]; };
   BSSasymp = derive2 { name="BSSasymp"; version="1.2-1"; sha256="0w141yxqpck59n85rjc6d3qy6bwhk1z80zsm21hda0bgfwy9v6wy"; depends=[fICA JADE]; };
   BSagri = derive2 { name="BSagri"; version="0.1-8"; sha256="148pr4lkgdi4bwc9lavgj356nh240iazz28xklq14rw4gzhmz2k4"; depends=[boot gamlss MCPAN mratios multcomp mvtnorm]; };
   BSquare = derive2 { name="BSquare"; version="1.1"; sha256="1s16307m5gj60nv4m652iisyqi3jw5pmnvar6f52rw1sypfp5n49"; depends=[quadprog quantreg VGAM]; };
@@ -267,6 +277,7 @@ in with self; {
   BTYDplus = derive2 { name="BTYDplus"; version="1.0.1"; sha256="0x8as4zskpbsvhh8gnvzgp833dkv01cs5fqfva9qri296343kppv"; depends=[bayesm BTYD coda data_table mvtnorm Rcpp]; };
   BUCSS = derive2 { name="BUCSS"; version="0.0.2"; sha256="188d9f0gdhym28xvvk5z10amdbg50w6ab4ik2r9qfc3p1v7k10q9"; depends=[]; };
   BVS = derive2 { name="BVS"; version="4.12.1"; sha256="111g61bpwh80v6gy44q087swcrnnnzdcibm22pzzi9jsfphy6l0c"; depends=[haplo_stats MASS msm]; };
+  BVSNLP = derive2 { name="BVSNLP"; version="0.9.10"; sha256="06q7pdv0jc7q9m5ahyxj5dqv8bjc2zva3gjy8ys139mmv7i37pjv"; depends=[doParallel foreach Rcpp RcppArmadillo RcppEigen RcppNumerical]; };
   BWStest = derive2 { name="BWStest"; version="0.2.1"; sha256="1kwd1s1dd21qca31np49aql839j8325y8bnxlcq84nw48vqv0jgc"; depends=[memoise Rcpp]; };
   BaBooN = derive2 { name="BaBooN"; version="0.2-0"; sha256="145q2kabjks2ql3m48sfjis5y35l8rcqnr5s176viv9yhfafn351"; depends=[coda Hmisc MASS nnet Rcpp RcppArmadillo]; };
   BaM = derive2 { name="BaM"; version="1.0.1"; sha256="0y8m6mhghlrp379swj9cfrzqcdr3a7y29mx4d6zld4is00wdw16b"; depends=[coda dlm MASS mice nnet]; };
@@ -277,12 +288,13 @@ in with self; {
   Bagidis = derive2 { name="Bagidis"; version="1.0"; sha256="1prdbkc0qgzkkrkhp43pjyg35q9ivngk8wa4a7khlnfsj21jaraf"; depends=[abind]; };
   BalanceCheck = derive2 { name="BalanceCheck"; version="0.1"; sha256="09mkssic173glgcn592cb6zmz80kndggqc4hc800f91xnfql0332"; depends=[ade4 mvtnorm]; };
   BalancedSampling = derive2 { name="BalancedSampling"; version="1.5.2"; sha256="0a4mb5lwjcy5d3h0ypsqmqniqx3dm64mssj65apgl48wqbm6zvv0"; depends=[Rcpp]; };
+  Ball = derive2 { name="Ball"; version="1.0.0"; sha256="1b4p4isgybxid14yywpgl7nv4d126281901wvwx6qwvf40nbfq3l"; depends=[gam survival]; };
   BarBorGradient = derive2 { name="BarBorGradient"; version="1.0.5"; sha256="0g2g7hrm23as1xbj79g48r8sj3gsj66fmi895jqlqfbqrl2fl7a5"; depends=[]; };
   BarcodingR = derive2 { name="BarcodingR"; version="1.0-2"; sha256="1mn5rdax8v1s2z3apk9z0kzy4hw19m8ql6j91l6wd29g2n2bjqxx"; depends=[ape class nnet sp]; };
   Barnard = derive2 { name="Barnard"; version="1.8"; sha256="1ki58hjs5kpmp76kwj1qi6hwmdvjphqb1lvrlhnmkgqxg4hw4vqg"; depends=[]; };
   Barycenter = derive2 { name="Barycenter"; version="1.2"; sha256="077b66pj60sryjnd6zkwqdd5hvbqh4pj8r65k4jb2rjvlbqyxln8"; depends=[Rcpp RcppArmadillo]; };
-  BatchExperiments = derive2 { name="BatchExperiments"; version="1.4.1"; sha256="0fg7p0q6avc0kcwcd3z4q3akrr2mkrx2yf9zcd6hhz22l3x4aphz"; depends=[BatchJobs BBmisc checkmate DBI plyr RSQLite]; };
-  BatchGetSymbols = derive2 { name="BatchGetSymbols"; version="1.2"; sha256="06ndhdsnpc7i367xksghgkwx1m6h6finwj0sab9ivcwpqb4n5h6f"; depends=[curl quantmod rvest stringr]; };
+  BatchExperiments = derive2 { name="BatchExperiments"; version="1.4.2"; sha256="0zvcpgzhbna6p37jlf57j7mzrvh5xs5w17janmv9v4210cpbzi1q"; depends=[backports BatchJobs BBmisc checkmate data_table DBI RSQLite]; };
+  BatchGetSymbols = derive2 { name="BatchGetSymbols"; version="2.0"; sha256="0jjw7iqlyasyivssmkwkn97al9k8l6bs57zkjwf7hjrj36jfa4x1"; depends=[curl dplyr quantmod rvest stringr tidyr XML]; };
   BatchJobs = derive2 { name="BatchJobs"; version="1.7"; sha256="035658marnw57p4f38g99rwmvmb6hpbq0fhlxp3qbw22zfnnkvs9"; depends=[backports BBmisc brew checkmate data_table DBI digest RSQLite sendmailR stringi]; };
   BatchMap = derive2 { name="BatchMap"; version="1.0.2.0"; sha256="0v3k4xrmsbyhzgmph8xna11dgpp10yxqmss95asrj6n814jxj19b"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; };
   BayClone2 = derive2 { name="BayClone2"; version="1.1"; sha256="1wprdj22zh8fwqawcv4m2n2y7sqwh2f6m9b0cq0rp4ll774yz30i"; depends=[combinat]; };
@@ -292,7 +304,6 @@ in with self; {
   BaySIC = derive2 { name="BaySIC"; version="1.0"; sha256="023ji6q1nvksmhp3ny8ad39xxccc0a1rv9iaiaagwavgzzc0pjd9"; depends=[fields poibin rjags]; };
   BayesBD = derive2 { name="BayesBD"; version="1.2"; sha256="10ik2lndqgmy6pvdm6cx4fsxgjb2fgi6hlz5ic35ab7fkpi90ka5"; depends=[jpeg mritc png Rcpp RcppArmadillo shiny]; };
   BayesBinMix = derive2 { name="BayesBinMix"; version="1.4.1"; sha256="1b18qg0mjbmrilwqffrq33gw04fzask2xgj1bp4cli51cjf2slf7"; depends=[coda doParallel foreach label_switching]; };
-  BayesBridge = derive2 { name="BayesBridge"; version="0.6"; sha256="1j03m465pwq0lhbrfvddjglrzs6px7bc89yvfzj776amm7myqd0l"; depends=[]; };
   BayesCR = derive2 { name="BayesCR"; version="2.1"; sha256="1qav7l64iqqdvr1v6c7hlzvbx7zbvsa55pyisvkq5rsayy1rdsl1"; depends=[mnormt mvtnorm rootSolve truncdist]; };
   BayesCombo = derive2 { name="BayesCombo"; version="1.0"; sha256="01rzjja0xzvqyjivl8a9da13v13ylm4dwv4f27cmgz2znakfg5y8"; depends=[]; };
   BayesComm = derive2 { name="BayesComm"; version="0.1-2"; sha256="1rrbvwcfm93cw0m33g0zn6nyshfjc97kb3fby9cga0zaixc0a8rk"; depends=[abind coda mvtnorm Rcpp RcppArmadillo]; };
@@ -300,15 +311,14 @@ in with self; {
   BayesFM = derive2 { name="BayesFM"; version="0.1.2"; sha256="0fiw2x29cpv3prywsbvs1m8a588s2wpi3bwzzjisi2rafbl619xd"; depends=[checkmate coda ggplot2 gridExtra plyr]; };
   BayesFactor = derive2 { name="BayesFactor"; version="0.9.12-2"; sha256="17zfs8bmzp59zaxzcrzis2sxdnqxrv9h1kpb22112mp9l1alvwl4"; depends=[coda gtools Matrix MatrixModels mvtnorm pbapply Rcpp RcppEigen stringr]; };
   BayesGESM = derive2 { name="BayesGESM"; version="1.4"; sha256="0qw2byb48f67461m1k8a1rqh6a0c3zq1rc4ni9xzxv8dih4wkq0f"; depends=[Formula GIGrvg normalp]; };
-  BayesGOF = derive2 { name="BayesGOF"; version="1.3"; sha256="0cf0aykl1mc5cvifc570dbfvxgq2kgp81a9bs1v23022jgi3i8ph"; depends=[orthopolynom VGAM]; };
+  BayesGOF = derive2 { name="BayesGOF"; version="2.1"; sha256="13frvpb3jl8vq1h545k2pbqdj7547k9zipxxiggryvk65l2p4v30"; depends=[orthopolynom VGAM]; };
   BayesH = derive2 { name="BayesH"; version="1.0"; sha256="0mjd1i3rkhyq3qcalq0ing0ap0igbhyvczaihl4pcfidgs70bci3"; depends=[]; };
   BayesLCA = derive2 { name="BayesLCA"; version="1.7"; sha256="0lsqgjqal9092v1wr07p8g5cqm24k2d80sp7hlr7r1xknakmm1b6"; depends=[coda e1071 fields MCMCpack nlme]; };
-  BayesLogit = derive2 { name="BayesLogit"; version="0.6"; sha256="0jygw6wkmb6887qglzhl525v56kb0y8ig0w56dywbd8dmsv967z7"; depends=[]; };
   BayesMAMS = derive2 { name="BayesMAMS"; version="0.1"; sha256="1qq3j9nm0k58gpyfavz77v1dwghy8pmpk0v52cj7l8sb3a3aiinm"; depends=[mvtnorm]; };
   BayesMed = derive2 { name="BayesMed"; version="1.0.1"; sha256="1ysc7sh0drqxbisi2dz6gj4jlw6qsd879bbhr5pra7nxgmk4h650"; depends=[MCMCpack polspline QRM R2jags]; };
   BayesMixSurv = derive2 { name="BayesMixSurv"; version="0.9.1"; sha256="19kf39881q00pap9afwvvggk4s4w3qpz17b7065nig1mvk8dnp8r"; depends=[survival]; };
   BayesNI = derive2 { name="BayesNI"; version="0.1"; sha256="0zvr6rkb5zxgl53xby69d0j3yrfnlcmac6kwkxz77q5616w9dwq0"; depends=[]; };
-  BayesNetBP = derive2 { name="BayesNetBP"; version="1.2.1"; sha256="03ml9nkcnn183cc06rxiw5fjx5nzkpz16cmkn9rnbyf9305zrwra"; depends=[doBy fields graph gRbase igraph qtl qtlnet RColorBrewer Rgraphviz]; };
+  BayesNetBP = derive2 { name="BayesNetBP"; version="1.3.0"; sha256="01blqc48ssgr3dg5bk7yzwpa59n3ja1dggglwm2441dwjxf10vxx"; depends=[bnlearn doBy fields graph gRbase igraph qtl qtlnet RColorBrewer Rgraphviz]; };
   BayesPieceHazSelect = derive2 { name="BayesPieceHazSelect"; version="1.1.0"; sha256="0znbmv7crqycdx75jh02h6z8d6cifjszbrldv2yva4mkjxsydag5"; depends=[mvtnorm]; };
   BayesPiecewiseICAR = derive2 { name="BayesPiecewiseICAR"; version="0.2.1"; sha256="1qrmw7zmygdzz84p76hyh2d8dx88b8xhbbd7radqm39g35zq5wz6"; depends=[mvtnorm]; };
   BayesRS = derive2 { name="BayesRS"; version="0.1.2"; sha256="11xpkq8x4xcpr4kmflr5blq0pn0ssfi9204bs5xfihn7q3d9bzwy"; depends=[coda ggplot2 metRology reshape rjags]; };
@@ -321,20 +331,20 @@ in with self; {
   BayesTreePrior = derive2 { name="BayesTreePrior"; version="1.0.1"; sha256="13igmvw1wj8kzfijzsrhdqr52kv4vqrm91i71ay6f7jnkry3spaw"; depends=[]; };
   BayesTwin = derive2 { name="BayesTwin"; version="1.0"; sha256="026blnhihbx9bpd63mxhbp0kpvj0lwbj7mg72alyfr2jnrh1n3lp"; depends=[coda foreign matrixStats rjags]; };
   BayesValidate = derive2 { name="BayesValidate"; version="0.0"; sha256="1gli65avpkb90asx92l1yjbwaxcsyb920idyjwgd2sl2b3l657ly"; depends=[]; };
-  BayesVarSel = derive2 { name="BayesVarSel"; version="1.7.1"; sha256="08zhy1brhb4zyishwgsc0hnmplw776d6qvakx39jiwbi02nvwvx9"; depends=[MASS mvtnorm]; };
+  BayesVarSel = derive2 { name="BayesVarSel"; version="1.8.0"; sha256="1sf18m4p8zaw2s5fv4p9s99n1n0cgzscgfhm5ngkzif43kwz1l6n"; depends=[MASS mvtnorm]; };
   BayesX = derive2 { name="BayesX"; version="0.2-9"; sha256="0p170m8zkaspiah1fdyql9lj9yqg6sl525blzq7wwgx5wx4rvncs"; depends=[coda colorspace maptools shapefiles sp]; };
   BayesXsrc = derive2 { name="BayesXsrc"; version="2.1-2"; sha256="114804f6maak5dmwzw4cbigjcdw7c6sgx48af35yrvkspi1gsz3b"; depends=[]; };
   BayesianAnimalTracker = derive2 { name="BayesianAnimalTracker"; version="1.2"; sha256="1pgjijqznfdpvw296h5vksnxgspxs7qhy6s84ww7abnlhg59bz5s"; depends=[TrackReconstruction]; };
   BayesianGLasso = derive2 { name="BayesianGLasso"; version="0.2.0"; sha256="09yb1qqx6qlsspk3ndrcqxy0956iqznw0rmyvqxgxxp3zd3y21xp"; depends=[MASS statmod]; };
   BayesianNetwork = derive2 { name="BayesianNetwork"; version="0.1.3"; sha256="1lli3v922cvp1kwg4sllgvm4rnb972anlpl0lklqk3aqi7ff6flw"; depends=[bnlearn heatmaply lattice networkD3 plotly rintrojs shiny shinyAce shinydashboard]; };
-  BayesianTools = derive2 { name="BayesianTools"; version="0.1.3"; sha256="03lvds5hxanygmc46sivh7vin48phr3xs27gdz5f6j5pcm8j8xj5"; depends=[coda DHARMa ellipse emulator IDPmisc MASS Matrix msm mvtnorm numDeriv Rcpp tmvtnorm vioplot]; };
+  BayesianTools = derive2 { name="BayesianTools"; version="0.1.4"; sha256="13imh2vc3picfy1ppzfisgkhk2n8w8s0fnhklkni06wz1816h2zd"; depends=[bridgesampling coda DHARMa ellipse emulator IDPmisc MASS Matrix msm mvtnorm numDeriv Rcpp tmvtnorm]; };
   Bayesianbetareg = derive2 { name="Bayesianbetareg"; version="1.2"; sha256="0imsz2761ngbnap0vnxks9527la51m5g8gkkn1vrgwis43i6qcgs"; depends=[betareg mvtnorm]; };
   Bayesthresh = derive2 { name="Bayesthresh"; version="2.0.1"; sha256="0w26h1ragqcg1i4h7c2y6vd8fig2jb2zrnvvchgg5z2hg9qdplsf"; depends=[coda lme4 MASS matrixcalc mvtnorm VGAM]; };
   BaylorEdPsych = derive2 { name="BaylorEdPsych"; version="0.5"; sha256="1kq6nvzdqwawygp7k62lw5hyccsj81jg82hq60yidgxnmmnnf7y2"; depends=[]; };
   BcDiag = derive2 { name="BcDiag"; version="1.0.10"; sha256="1gyinmx5wn2kk70hiy28ghilkhfirfjbfqdrqq5h3wfb4khnq6pz"; depends=[fabia]; };
   Bchron = derive2 { name="Bchron"; version="4.2.6"; sha256="0i77a72cq6ddpfgs2p0f3bskb03428jxxyq8chjyirsws1amzp92"; depends=[coda ellipse inline MASS mclust]; };
   Bclim = derive2 { name="Bclim"; version="3.1.2"; sha256="0dd4fx3rlljj3zb1m8q1bam1bswg497l3y8k0h0mkvjn94b4jbag"; depends=[ggplot2 MASS mclust statmod]; };
-  BeSS = derive2 { name="BeSS"; version="1.0.3"; sha256="0qli3p15mp9q5hl7av7dqpdnh9rzn9hxrqabkfh3h2di0vpwv78g"; depends=[glmnet Matrix Rcpp RcppEigen survival]; };
+  BeSS = derive2 { name="BeSS"; version="1.0.5"; sha256="1gq0zfrzkh2cndly7amhjy0qnfb60lsj7izmdlf2m8h7yrcicjzv"; depends=[glmnet Matrix Rcpp RcppEigen survival]; };
   Benchmarking = derive2 { name="Benchmarking"; version="0.26"; sha256="00w7a16lhra6rjylyj26q67mvgbc3wa27a2wmiwjz5yh7wdnh193"; depends=[lpSolveAPI ucminf]; };
   BenfordTests = derive2 { name="BenfordTests"; version="1.2.0"; sha256="1nnj0w0zwcmg7maqmmpixx7alvsyxva370ssc26ahg6kxy5a621w"; depends=[]; };
   Bergm = derive2 { name="Bergm"; version="4.1.0"; sha256="13qdcwycppwy9qqc42zi5fz6wg4a47pfczb3nnfj1bdn2drxqw2x"; depends=[coda ergm Matrix MCMCpack mvtnorm network]; };
@@ -349,45 +359,48 @@ in with self; {
   BiSEp = derive2 { name="BiSEp"; version="2.2"; sha256="1ha7rc1q54dr2xl4bpkiwl703igmmi9qphsgv2h0flq7iz0gr351"; depends=[AnnotationDbi GOSemSim mclust]; };
   BiTrinA = derive2 { name="BiTrinA"; version="1.2"; sha256="0q2wqxj2ipmppilhvq80cnvhnhcp26h422i8ghx26nrkswhx378s"; depends=[diptest]; };
   BiasedUrn = derive2 { name="BiasedUrn"; version="1.07"; sha256="13i2lgfnjhlbbm2yxfc2l5hswqw6x03pwba5csjmirv8kpjw4xr3"; depends=[]; };
-  BibPlots = derive2 { name="BibPlots"; version="0.0.2"; sha256="04j5wmdy464sgv1yz4km9i14i3j95qr3m2vi96nmsy5158ga9ilz"; depends=[]; };
+  BibPlots = derive2 { name="BibPlots"; version="0.0.3"; sha256="06cpz4h57mz5vpapgsrc9g67dkkiabp1n6avnccvgcpzjr0zscsw"; depends=[]; };
   BigQuic = derive2 { name="BigQuic"; version="1.1-7"; sha256="1bhi9dilrprgjvqyc2hb4a0y8rm9la0m5lgry9mf184p56z1syzb"; depends=[Matrix Rcpp scalreg]; };
   BigSEM = derive2 { name="BigSEM"; version="0.2"; sha256="091fdibcxd8a8kf9k4pvc1sah830wh179f28gag9g816h4qclnx9"; depends=[MASS parcor]; };
   BigTSP = derive2 { name="BigTSP"; version="1.0"; sha256="1jdpa8rcnrhzn0hilb422pdxprdljrzpgr4f26668c1vv0kd6k4v"; depends=[gbm glmnet randomForest tree]; };
   BigVAR = derive2 { name="BigVAR"; version="1.0.2"; sha256="14vb6nc6bn22dd112sg9zypkchmkv17gnwxs915k0k5vbb9czlr5"; depends=[lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; };
   BimodalIndex = derive2 { name="BimodalIndex"; version="1.1.5"; sha256="08hkdpvwvi5vczc9hdzbk5qnr6s44wyf6n0xv0zbd51dqcmv2xbk"; depends=[mclust oompaBase]; };
-  BinNonNor = derive2 { name="BinNonNor"; version="1.3"; sha256="0lxhfys066wz8svr9mjb28rd85lhjicqw4py4j96w9zgi974ha51"; depends=[BB corpcor Matrix mvtnorm]; };
-  BinNor = derive2 { name="BinNor"; version="2.1"; sha256="14b90y40wzqwaf1v1l92s17j0kggbcsg5c90l1r7wi3j4xcl20pc"; depends=[corpcor Matrix mvtnorm psych]; };
-  BinOrdNonNor = derive2 { name="BinOrdNonNor"; version="1.3"; sha256="18cks0hh6a49jr1yq0pwgw3scy1b7cl2060miwxswpwry9lcnnn5"; depends=[BB corpcor GenOrd Matrix mvtnorm OrdNor]; };
+  BinNonNor = derive2 { name="BinNonNor"; version="1.4"; sha256="00405ww9mh910jqww60w7cb8qbjql2jn13m60ly0bnxilg44r0bb"; depends=[BB corpcor Matrix mvtnorm]; };
+  BinNor = derive2 { name="BinNor"; version="2.2"; sha256="03cggpk9fhndnk9vv5i6fzsq4wjxc5405xxlxg3l9gb618kj437f"; depends=[corpcor Matrix mvtnorm psych]; };
+  BinOrdNonNor = derive2 { name="BinOrdNonNor"; version="1.4"; sha256="0qiy0wf9i9r44ycz1jl666nwpsv5yz7vzz1szdy22sk68lz984bv"; depends=[BB corpcor GenOrd Matrix mvtnorm OrdNor]; };
   Binarize = derive2 { name="Binarize"; version="1.2"; sha256="014iagr76y3v7ljn6zlbg1hxwbwdi889bqxa7hwmqrcybnla22ja"; depends=[diptest]; };
   BinaryEMVS = derive2 { name="BinaryEMVS"; version="0.1"; sha256="1ainp6pg481yqhjc4f1pkxzxczbi3qm0kgq280vndq859ldfkpnh"; depends=[]; };
   BinaryEPPM = derive2 { name="BinaryEPPM"; version="2.1"; sha256="1f4y1mrscy9z87yglbynnsis623ar0gqpda3dfm9isa2z10c24qr"; depends=[expm Formula lmtest numDeriv]; };
   BinarybalancedCut = derive2 { name="BinarybalancedCut"; version="0.2"; sha256="1rs7x7ggqzaz9r2912g0fi9x7przd8gjy6pianx457w5f39fqx4v"; depends=[ggplot2 reshape2]; };
+  BioCircos = derive2 { name="BioCircos"; version="0.3.3"; sha256="0l8kd1imb8022n631psm9na0vp502ndn2q7m3mshx9c0mnqsv8n3"; depends=[htmlwidgets jsonlite plyr RColorBrewer]; };
   BioFTF = derive2 { name="BioFTF"; version="1.2-0"; sha256="03r6fhpc4dqrcnbl73j9kav1l7rblgfldpbkl2p367vv20xggqih"; depends=[]; };
   BioGeoBEARS = derive2 { name="BioGeoBEARS"; version="0.2.1"; sha256="0wyddc5ma47ljpqipfkwsgddp12m9iy4kqwwgklyhf0rqia56b1h"; depends=[ape cladoRcpp FD gdata optimx phylobase plotrix rexpokit xtable]; };
-  BioInstaller = derive2 { name="BioInstaller"; version="0.3.1"; sha256="0sdn9832dlgsj7nr6jhjndmqjam98610rfiai0101jjcg8wbq64i"; depends=[configr devtools futile_logger git2r R_utils RCurl rvest stringi stringr]; };
+  BioInstaller = derive2 { name="BioInstaller"; version="0.3.3"; sha256="0mr3qyabr4pwz4cjnig5nzbq0hqqd9rmrpnhmgb1gp3c6l013yk1"; depends=[configr devtools futile_logger git2r R_utils RCurl rvest stringi stringr]; };
   BioMark = derive2 { name="BioMark"; version="0.4.5"; sha256="1ifc72bayy3azbilajqqzl0is6z7l1zaadchcg3n8lhmjrv5sk3m"; depends=[glmnet MASS pls st]; };
   BioPET = derive2 { name="BioPET"; version="0.2.1"; sha256="0pwkgffm8hlgvpk3dfzskl50kp9b4rnxc8aj119kwrmlfazhhl50"; depends=[ggplot2 gridExtra pROC VGAM]; };
   BioPhysConnectoR = derive2 { name="BioPhysConnectoR"; version="1.6-10"; sha256="1cc22knlvbvwsrz2a7syk2ampm1ljc44ykv5wf0szhnh75pxg13l"; depends=[matrixcalc snow]; };
   BioStatR = derive2 { name="BioStatR"; version="2.0.0"; sha256="1k3z337lj8r06xgrqgi5h67hhkz2s5hggj6dhcciq26i1nzafsw6"; depends=[ggplot2]; };
   Biocomb = derive2 { name="Biocomb"; version="0.3"; sha256="0shhsljg0knfp83b3hrs2c674sqx2348h5m99jhf19jf1i98pf1k"; depends=[arules class e1071 FSelector gtools MASS nnet pamr pROC randomForest Rcpp rgl ROCR rpart RWeka]; };
   Biodem = derive2 { name="Biodem"; version="0.4"; sha256="0k0p4s21089wg3r3pvyy9cxsdf4ijdl598gmxynbzvwpr670qnsh"; depends=[]; };
-  BiodiversityR = derive2 { name="BiodiversityR"; version="2.8-4"; sha256="18g283cs9fz5nscni4kaai6z7w0p2g619n3wzdz6kqmjdafy6bhv"; depends=[Rcmdr vegan]; };
+  BiodiversityR = derive2 { name="BiodiversityR"; version="2.9-1"; sha256="16v21svrkhpxd4qb1ayh29c0zrfqm4m4fzfsg1zaw07ham2x1y90"; depends=[Rcmdr vegan]; };
   Biograph = derive2 { name="Biograph"; version="2.0.6"; sha256="0vklqwbifbac3v9ws9fs22yxpqqk5b3m96qzr8j0irnimb5kgh5p"; depends=[Epi etm ggplot2 lubridate msm mstate mvna plyr reshape survival]; };
-  Biolinv = derive2 { name="Biolinv"; version="0.1-1"; sha256="1fnx9fcybw8agc2zba61lk4ygq8qi3b747i5cnh1b3vh6dw5fapq"; depends=[classInt fields raster sp spatstat]; };
+  Bioi = derive2 { name="Bioi"; version="0.2.9"; sha256="0kvqvvaws1zc3npxvl3jqidak24n5y8n98ml44mkbh7c5n296z2p"; depends=[assertthat dplyr igraph Rcpp]; };
+  Biolinv = derive2 { name="Biolinv"; version="0.1-2"; sha256="0g9vw1jcsjawmddkixssm5gbncy17fdd6a3c5b2qd4hx81kxz8q9"; depends=[classInt fields raster sp spatstat]; };
   Bios2cor = derive2 { name="Bios2cor"; version="1.2"; sha256="00fzvj20x85gcpb9l6rfnm3qml8nnl365z1a68j90qi14wy6dfh6"; depends=[bigmemory bio3d circular igraph]; };
-  BisRNA = derive2 { name="BisRNA"; version="0.2.1"; sha256="1sjx53lkdhiygr2w7drs9c47hnmv2s232bsd96d6k2xn6yai593i"; depends=[knitr MASS]; };
+  BisRNA = derive2 { name="BisRNA"; version="0.2.2"; sha256="11jl5109nlm272vncprwplkz4kpvg7yx6yfnbjg47lfrsxcj8n0g"; depends=[MASS]; };
   BivRegBLS = derive2 { name="BivRegBLS"; version="1.0.0"; sha256="1fi399vv54dnfywxbc8yb1r58lrl7zpqkahvcx3f5svjy20dvvbw"; depends=[ellipse]; };
-  BivUnifBin = derive2 { name="BivUnifBin"; version="1.1"; sha256="0dxkk3pjnbjx04r9870lcr3hl4r5j7cd3y1fn800fz0qjnv5dahd"; depends=[BinOrdNonNor rootSolve]; };
+  BivUnifBin = derive2 { name="BivUnifBin"; version="1.2"; sha256="0m4a2m7lvlm02hqqigwg3cd6sjzxnxqw1mchxj5g19whk34vwkwi"; depends=[BinOrdNonNor rootSolve]; };
   BivarP = derive2 { name="BivarP"; version="1.0"; sha256="08f7sphylaj3kximy1avaf29hxj2n800adsnssh01p9bcxnzb2i4"; depends=[copula dfoptim survival]; };
+  Bivariate_Pareto = derive2 { name="Bivariate.Pareto"; version="1.0.0"; sha256="0m5a41q56z6v0681y9093n5rdd33mg4fc904wjkqznlb4kn1156x"; depends=[]; };
   BlakerCI = derive2 { name="BlakerCI"; version="1.0-5"; sha256="16zj678qzwqih92q19dma7a602d0hif2dhii5hvxdgjymg7hg2bj"; depends=[]; };
   BlandAltmanLeh = derive2 { name="BlandAltmanLeh"; version="0.3.1"; sha256="11p30zqb3f9ifk3v18dspg18sclz5zxjygy7hw8ccb4bcqhx68lm"; depends=[]; };
   Blaunet = derive2 { name="Blaunet"; version="2.0.7"; sha256="19p2rqbg44pi0dz2iimjgr69zyrjf0dfsic6spph81dyrri1zyvh"; depends=[cairoDevice ergm foreign gWidgets gWidgetsRGtk2 haven network plot3D plot3Drgl rgl RGtk2 sna statnet_common]; };
+  BlockFeST = derive2 { name="BlockFeST"; version="1.3"; sha256="062x7lrcpkd15j3ar58j1gssbd0h66dym7c004jf0k040dkk0z43"; depends=[BASIX]; };
   BlockMessage = derive2 { name="BlockMessage"; version="1.0"; sha256="1jrcb9j1ikbpw098gqbcj29yhffa15xav90y6vpginmhbfpwlbf4"; depends=[]; };
-  Blossom = derive2 { name="Blossom"; version="1.4"; sha256="0002rvz0mlwl2clglzqldg0x5l8lj07qh74ifpdaf1lrdailh328"; depends=[]; };
   Bmix = derive2 { name="Bmix"; version="0.6"; sha256="17swhn2p7jv29fkspacg2v181lkc9yd3xww2fx31xs8hsndcm857"; depends=[mvtnorm]; };
-  BoSSA = derive2 { name="BoSSA"; version="2.3"; sha256="0662qhx1q4gr8n9vifm6fp0sv92gs33ji5ph8bi7hpkbvq7584pl"; depends=[ape jsonlite phangorn plotrix RSQLite]; };
+  BoSSA = derive2 { name="BoSSA"; version="3.1"; sha256="1d6g7rfmva09y0nzh99y7wwbk7kac50xvk6il65iwfln2427v9ns"; depends=[ape jsonlite phangorn plotrix RSQLite]; };
   BoardGames = derive2 { name="BoardGames"; version="1.0.0"; sha256="1w3ghs29qlnjrd46lvv055snclwwy6a22fgdqszqm377w4favnhm"; depends=[]; };
-  Bolstad = derive2 { name="Bolstad"; version="0.2-34"; sha256="0snqy580glwpv37hvjnivb3f06hf2prqply1nj5ks5aryabiiz59"; depends=[mvtnorm]; };
+  Bolstad = derive2 { name="Bolstad"; version="0.2-36"; sha256="0y33664wkl0z61v6k8j9ww4a8kb1mlaaq9ippp9qggdjgbqc8rqz"; depends=[mvtnorm]; };
   Bolstad2 = derive2 { name="Bolstad2"; version="1.0-28"; sha256="08cfadvl9jl9278ilsf8cm2i2a3i8zsa2f3vjzw2nlv85fwi2c7v"; depends=[]; };
   BonEV = derive2 { name="BonEV"; version="1.0"; sha256="0lmgrg53b0abb5hidyjjmwn7lf2ani84k9fil7g6j6mdajjhh1b7"; depends=[qvalue]; };
   BoolFilter = derive2 { name="BoolFilter"; version="1.0.0"; sha256="14z4fzf8p4wgi939qs6v39a3xizccjcx7j4szsydllpkvxbwggbw"; depends=[BoolNet Rlab]; };
@@ -407,12 +420,13 @@ in with self; {
   Brobdingnag = derive2 { name="Brobdingnag"; version="1.2-4"; sha256="1saxa492f32f511vw0ys55z3kgyzhswxkylw9k9ccl87zgbszf3a"; depends=[]; };
   BrownDog = derive2 { name="BrownDog"; version="0.2.1"; sha256="0wnf1jcf4cakbvj9j1l7jk9mq7gd4j1il1ha2vglghqn04f27938"; depends=[httpuv jsonlite RCurl]; };
   Brq = derive2 { name="Brq"; version="2.0"; sha256="0j6d1m2drzy1wyr5y25qb8gs6555vh0lkyh415kw17x9dj4ks0zx"; depends=[]; };
-  Brundle = derive2 { name="Brundle"; version="1.0.5"; sha256="18r54afnh8lylly89qpsgy39r81qkpijx482p62m2dsswhfhj022"; depends=[DESeq2 DiffBind lattice Rsamtools]; };
-  BsMD = derive2 { name="BsMD"; version="2013.0718"; sha256="1yvazqlbmm221r7nkhrhi309gkk6vx7ji5xlvf07klya2zg20gcj"; depends=[]; };
+  Brundle = derive2 { name="Brundle"; version="1.0.8"; sha256="1yj196x6xb75qgi16pgg3dyjmxmjklfjcpxymaki32drhmylf24z"; depends=[DESeq2 DiffBind lattice Rsamtools]; };
+  BsMD = derive2 { name="BsMD"; version="2013.0718-1"; sha256="06w1dl5zp1cgjhk3m2zz6xsmcfwdk6ar3gmxdn96v71mqnhv81v1"; depends=[]; };
+  BullsEyeR = derive2 { name="BullsEyeR"; version="0.2.0"; sha256="1p8b5w818zi7zs0n13cc3sw8z0z9mfr5cn5y5icsx1jam5amppci"; depends=[Matrix NLP slam tm topicmodels]; };
   BurStFin = derive2 { name="BurStFin"; version="1.02"; sha256="16w2s0bg73swdps9r0i8lwvf1najiqyx7w7f91xrsfhmnqkkjzka"; depends=[]; };
   BurStMisc = derive2 { name="BurStMisc"; version="1.1"; sha256="0cyi42zkn2dby162x9f95b3hpqxbzx25s7nahb4p86r60xj3a5c0"; depends=[]; };
   BuyseTest = derive2 { name="BuyseTest"; version="1.0"; sha256="1nfj2ajah2dg1p47g2z0zf9s24sxj4dfn3nny1h4qmqwcb4vs55g"; depends=[data_table lava Rcpp RcppArmadillo snowfall survival]; };
-  C50 = derive2 { name="C50"; version="0.1.0-24"; sha256="17ay0rbm2cg2s27mh09xg0knk7idx6f761sc849m41vsc6pfhzk1"; depends=[partykit]; };
+  C50 = derive2 { name="C50"; version="0.1.1"; sha256="1pq1plsh7kf45f0ghrja0xjikaxgvq14k8k80ml5rkabyv11zg03"; depends=[Cubist partykit]; };
   CADFtest = derive2 { name="CADFtest"; version="0.3-3"; sha256="06bwv728ckalzibxginzfica24w18m4g87i0i064m3q89ghmnlqm"; depends=[dynlm sandwich tseries urca]; };
   CADStat = derive2 { name="CADStat"; version="3.0.8"; sha256="0wdglw1vyd5gz70r9ma0mwshvizv39nb4ahp8pvr70c4qqzsfhc0"; depends=[bio_infer car gdata gmodels JavaGD JGR lattice MASS quantreg rJava rpart XML]; };
   CAISEr = derive2 { name="CAISEr"; version="0.2.1"; sha256="1y070r50vhs5ri91zw28wr8nkiq15n9dpjggi6hs601a0bj7463v"; depends=[assertthat]; };
@@ -428,12 +442,12 @@ in with self; {
   CARLIT = derive2 { name="CARLIT"; version="1.0"; sha256="04kpjfps4ydf8fj75isqp16g1asdsyf8nszhbfkpw1zxkrmiksyp"; depends=[]; };
   CARS = derive2 { name="CARS"; version="0.2"; sha256="1n8p4n9fbl20jps9g9pbspw54hq9y6kqbggc8h0i9pbm1b25ngrg"; depends=[np]; };
   CARrampsOcl = derive2 { name="CARrampsOcl"; version="0.1.4"; sha256="1sdrir7h7xl1imipm9b71vca062dxqsqd8mg3w9f3s80x2aghxl8"; depends=[fields OpenCL]; };
+  CAST = derive2 { name="CAST"; version="0.1.0"; sha256="0mihpcknwk86m41x14j2g3f2s2ya20sh99ng85rcph57a4v6ar05"; depends=[caret]; };
   CATT = derive2 { name="CATT"; version="2.0"; sha256="12xdspl1gbf51snyrl44nn7alfyccdfihibkgvzr66lrby8b8fhg"; depends=[]; };
   CATTexact = derive2 { name="CATTexact"; version="0.1.0"; sha256="0mklkmay9ph4d0z2l1gcg0lj429xkyhmz7srdil5rgwqxx9dnqs8"; depends=[]; };
-  CATkit = derive2 { name="CATkit"; version="3.0.0.2"; sha256="1afaa1s8clynpna9hwgbgfdp5jciv0n5q9vb27cgyl9n69nla991"; depends=[magic MASS png rtf season signal]; };
+  CATkit = derive2 { name="CATkit"; version="3.2.3"; sha256="1vl60m6x3mqgghqzpxq8aalpjpcagamjk5zg62mqpwx0vgdwv2fy"; depends=[assertr magic MASS png rtf season signal]; };
   CAvariants = derive2 { name="CAvariants"; version="3.4"; sha256="1mrqvcgnxbzah7vhqqqdygds8plwswd2l8w0aq5132byhhc4kiax"; depends=[]; };
   CBCgrps = derive2 { name="CBCgrps"; version="2.1"; sha256="0cvgcpvdvpvjkzkwapx0y4a666xq54dwm00w4w9n8fhgp05mnkn8"; depends=[nortest]; };
-  CBPS = derive2 { name="CBPS"; version="0.15"; sha256="0mlv5z400yia9gdv3mfq75197xci57l1231k1j3x8qnqyghjsynh"; depends=[glmnet MASS MatchIt nnet numDeriv]; };
   CCA = derive2 { name="CCA"; version="1.2"; sha256="00zy6bln22qshhlll0y0adnvb8wa1f7famqyws71b6pcnwxki5ha"; depends=[fda fields]; };
   CCAGFA = derive2 { name="CCAGFA"; version="1.0.8"; sha256="1jxb6d1h5p97wnr45s1fsspksqn771nib415ihxi4vj5w8s94j8b"; depends=[]; };
   CCM = derive2 { name="CCM"; version="1.1"; sha256="0gya1109w61ia6cq3jg2z5gmvjkv9xg71l2rxhrrf6bx1c2nsrq6"; depends=[]; };
@@ -451,9 +465,9 @@ in with self; {
   CDVineCopulaConditional = derive2 { name="CDVineCopulaConditional"; version="0.1.1"; sha256="1wyy324vrwipdsq0p021bj1gdhyxg09g3dkw8wv5v6rfrrs84m9k"; depends=[combinat VineCopula]; };
   CEC = derive2 { name="CEC"; version="0.9.4"; sha256="194n190szwzxjxfdhiah1f50vp6n7f3q567yky7pq1x2hngna5rs"; depends=[]; };
   CEGO = derive2 { name="CEGO"; version="2.2.0"; sha256="0k01fb8bciq3m2rcqcicrlhx6av46sdczgcyn8df1f3pr28l1fyf"; depends=[DEoptim fastmatch MASS Matrix ParamHelpers quadprog]; };
+  CENFA = derive2 { name="CENFA"; version="0.1.0"; sha256="1bxrqvi67s93mvkbigb8l7rrn2j2ix7qw7vcxf4dbwd7xf3qqv6q"; depends=[doSNOW foreach magrittr pbapply raster Rcpp snow sp]; };
   CEoptim = derive2 { name="CEoptim"; version="1.2"; sha256="0bbjrhl63cbx1rsr5gclbqhjpnjid8ynk2ygaf1chf8z381n7650"; depends=[MASS msm sna]; };
   CFC = derive2 { name="CFC"; version="1.1.0"; sha256="0yhb314qcdxig5vg0nbzvsqiddlsqlm50vzddhpp0z5n3xfa7h2c"; depends=[abind doParallel foreach Rcpp RcppArmadillo RcppProgress survival]; };
-  CGManalyzer = derive2 { name="CGManalyzer"; version="1.0"; sha256="1djy7qc50ndxcz0chzjdl3f3cp3ffsm9s84mgwgql49qj8k9wib4"; depends=[]; };
   CGP = derive2 { name="CGP"; version="2.0-2"; sha256="1mggv3c8525vbdfdc3yhpp4vm4zzdvbwyxim29zj0lzwjf9fkgqk"; depends=[]; };
   CHAT = derive2 { name="CHAT"; version="1.1"; sha256="1hl4xr4lkvb7r36gcbgax6ipqc3rsvn1r03w7fk9gf9bbyg7bkhg"; depends=[DNAcopy DPpackage]; };
   CHCN = derive2 { name="CHCN"; version="1.5"; sha256="18n8f002w0p0l1s5mrrsyjddn10kdbb6b7jx1v9h1m81ifdbv0xb"; depends=[bitops RCurl]; };
@@ -466,17 +480,18 @@ in with self; {
   CIEE = derive2 { name="CIEE"; version="0.1.0"; sha256="1z4061rkryhnhf6qdxlna1w2dsy06pipx3sk1hswah4i2n7cc7sq"; depends=[survival]; };
   CIFsmry = derive2 { name="CIFsmry"; version="1.0.1.1"; sha256="1m2m2zvg9ghy3bm2sll7jp4xm2vw58kc5xaxd2c9k82771m3a4j0"; depends=[]; };
   CINID = derive2 { name="CINID"; version="1.2"; sha256="0pkgzi2j0045p10kjvnq8f4j1agzrqfw0czvvfrzj9yjfpj8xc99"; depends=[]; };
-  CINNA = derive2 { name="CINNA"; version="1.1.2"; sha256="1k16a7wy3n6bfqrvw3hs7vxawpy3cpy95v3jfagasp70r4cir9q4"; depends=[centiserve corrplot dendextend factoextra FactoMineR GGally ggplot2 igraph network pheatmap plyr qdapTools Rtsne sna viridis]; };
+  CINNA = derive2 { name="CINNA"; version="1.1.3"; sha256="0y2xymk323xjkwpii1i13q38dsfi1ywlvw3ykq4928jb58f96121"; depends=[centiserve circlize corrplot dendextend factoextra FactoMineR GGally ggplot2 igraph network pheatmap plyr qdapTools Rtsne sna viridis]; };
   CINOEDV = derive2 { name="CINOEDV"; version="2.0"; sha256="0fjpxahc55zd972p3hlw9fk4dq8hpq715xff8p98kfh29dvw9mnz"; depends=[ggplot2 igraph R_matlab reshape2]; };
   CITAN = derive2 { name="CITAN"; version="2015.12-2"; sha256="08h91q7529q04izgqw3ahm4r0zjpwnwyc0vynykvv9fz2fkbk7wb"; depends=[agop DBI hash RGtk2 RSQLite stringi]; };
   CIplot = derive2 { name="CIplot"; version="1.0"; sha256="0hx3dn7d8hvsh75747d9046iqriy3bjnchph8xllnvlhkrm4di1f"; depends=[MASS multcomp]; };
-  CLME = derive2 { name="CLME"; version="2.0-6"; sha256="0cd3sn6amariap04lhc2kwsdcj4i4axrx95xr10spykr8py4skmc"; depends=[isotone lme4 MASS nlme openxlsx prettyR shiny stringr]; };
+  CLA = derive2 { name="CLA"; version="0.90-1"; sha256="1rpklm21i9rjw0vfhaz9brq9571yjynwfhpv6dp6fbl3cj7bwb8g"; depends=[]; };
+  CLME = derive2 { name="CLME"; version="2.0-9"; sha256="11kwk3v5kbk1k2gsglpvlq6nyh0b0qd97jpqcv1s2swx12pzdxqc"; depends=[isotone lme4 MASS nlme openxlsx prettyR shiny stringr]; };
   CLSOCP = derive2 { name="CLSOCP"; version="1.0"; sha256="0rkwq9rl2ph4h5zwb2i3yphjyzxmh6b6k23a8gcczycx6xdq4yhw"; depends=[Matrix]; };
   CMC = derive2 { name="CMC"; version="1.0"; sha256="1r9a5k79fyw01yiwxq02327hpn4l1v2lp0958jj9217wxmhn3pr5"; depends=[]; };
   CMF = derive2 { name="CMF"; version="1.0"; sha256="0hvqcbmg2vd0i1rjb1m1bkrbv2vkj1siank1v8w0n5b6881cyz7q"; depends=[Rcpp]; };
   CMPControl = derive2 { name="CMPControl"; version="1.0"; sha256="0cp29cibiydawsl0cq433l9abdivr16b431zlrh45wzr5kzfcs0v"; depends=[compoisson]; };
-  CMatching = derive2 { name="CMatching"; version="1.0"; sha256="1qvixshdkv1sgy4ianfcvb4mfnc05rwm7hxs3rssnma7m9j3g2np"; depends=[lme4 lmtest Matching multiwayvcov]; };
-  CMplot = derive2 { name="CMplot"; version="3.2.1"; sha256="0gnqqw59xsjq671kiykj8k1qx1m2j7hj8dsnh7ccirpq55hqajff"; depends=[]; };
+  CMatching = derive2 { name="CMatching"; version="2.0"; sha256="0g8hiag51cqj0wy7lbaa5x4xbnyb74s5xiws6pwxhrvbp3ym69bs"; depends=[lme4 lmtest Matching multiwayvcov]; };
+  CMplot = derive2 { name="CMplot"; version="3.3.1"; sha256="01qpy7bb3503i3b8v4psrxbx9ff5vzcv54j55mdr1bphwmnp1kzq"; depends=[]; };
   CNLTreg = derive2 { name="CNLTreg"; version="0.1"; sha256="1fjc45kv2nm902vpfynfxj0n7nm2prazm44nhg2m30vd6l1ijisv"; depends=[adlift miscTools nlt]; };
   CNLTtsa = derive2 { name="CNLTtsa"; version="0.1"; sha256="0s98ckg6ms3kh49b8la2d8rsdb0m4m0v8gdbj48nqxncdvg25qk4"; depends=[adlift CNLTreg fields nlt]; };
   CNOGpro = derive2 { name="CNOGpro"; version="1.1"; sha256="1frsmhfqrlg1vsa06cabqmrzngq4p5gqwyb9qgnsgg81a9ybm6l8"; depends=[seqinr]; };
@@ -486,39 +501,38 @@ in with self; {
   CNull = derive2 { name="CNull"; version="1.0"; sha256="14hy86zg18hqxi63bfzrpkz70yrzfxp2v2pva5xnrvx9dmlyz820"; depends=[ape Matrix PhyloMeasures Rcpp]; };
   COBRA = derive2 { name="COBRA"; version="0.99.4"; sha256="1r1cw12d7c148pcgcg08bfsr1q1s736kfpyyss6b4d7ny7wgmqy4"; depends=[]; };
   COCONUT = derive2 { name="COCONUT"; version="1.0.2"; sha256="1qjrhxn6dkxyimdca3nslaiw3hncfpk1pk4v01mcrnz550z001nz"; depends=[]; };
-  COMBAT = derive2 { name="COMBAT"; version="0.0.2"; sha256="1sda41db8h5gi7gqq0hj433dd6lh4xj75skjgmgqa3p80rndw461"; depends=[corpcor mvtnorm]; };
+  COMBAT = derive2 { name="COMBAT"; version="0.0.4"; sha256="0m700pl33frdpc9y16y4zyh1ixpardh0r5kmz8a78jrh1acn30id"; depends=[corpcor mvtnorm]; };
   COMBIA = derive2 { name="COMBIA"; version="1.0.5"; sha256="0f4p2gb16bb46jcdmzlaaicymqnw18c7qc39m0s5jwps4c8whyym"; depends=[gdata hash lattice latticeExtra oro_nifti]; };
   COMPoissonReg = derive2 { name="COMPoissonReg"; version="0.4.1"; sha256="14gjrf2hj7dy4hd0qnh6vqjzh7gc6g7gm7rh1d8dingkjwmjzrqb"; depends=[]; };
   CONDOP = derive2 { name="CONDOP"; version="1.0"; sha256="0si9nm93wk9lif3r6jh2nxr4sjq1iqyfavbykja3zcy6yn05i19s"; depends=[earth GenomeInfoDb GenomicRanges IRanges mclust plyr randomForest rminer S4Vectors seqinr]; };
   CONS = derive2 { name="CONS"; version="0.1.1"; sha256="0w0rca4z3hij0lbabpdnhv2lb52gx574g7bqp6q16772pi4685hf"; depends=[FactoMineR gridExtra gWidgets pander raster readxl REdaS]; };
   CORE = derive2 { name="CORE"; version="3.0"; sha256="0wq9i7nscnzqiqz6zh6hglm7924261bw169q3x6l9i6jgqhvn32d"; depends=[]; };
-  CORElearn = derive2 { name="CORElearn"; version="1.51.2"; sha256="0ifj7b29ij8ab96j733afkracwxpz5skcg9j3y9v21ny775l9cps"; depends=[cluster nnet rpart]; };
+  CORElearn = derive2 { name="CORElearn"; version="1.52.0"; sha256="01kby6kddfbv6qhmsja1q4gyqq57f7n9kk4555g258f9a6900c2n"; depends=[cluster nnet rpart]; };
   CORM = derive2 { name="CORM"; version="1.0.2"; sha256="0g5plafx2h1ija8jd6rxvy8qsrqprfbwbi1kq1p4jdr9miha20nv"; depends=[cluster limma]; };
   COSINE = derive2 { name="COSINE"; version="2.1"; sha256="10ypj849pmvhx117ph3k1jqa62nc4sdmv8665yahds7mh0ymhpjj"; depends=[genalg MASS]; };
   COUNT = derive2 { name="COUNT"; version="1.3.4"; sha256="02f7779fy0d2bql88x5v9csbxljhnyvl8wb8h83xrmwl7kaxsdpy"; depends=[MASS msme sandwich]; };
   COUSCOus = derive2 { name="COUSCOus"; version="1.0.0"; sha256="1ykqi72v8v1b3g9qy6h34dvk5fynzf1rl2mby65p08axmaba5798"; depends=[bio3d matrixcalc]; };
-  COveR = derive2 { name="COveR"; version="1.0.1"; sha256="1j5fr8pn9gnasbb0dz263c49c62cbqm59xfqjgn7slj7wbiipfq8"; depends=[]; };
   CP = derive2 { name="CP"; version="1.6"; sha256="18zblf13riiz3mq3hkvg6vhiwjzpsn6mvgc2p0bqyldy98v4aisd"; depends=[survival]; };
   CPBayes = derive2 { name="CPBayes"; version="0.2.0"; sha256="1h4mipvmcjhs1s1dqbibxz2sf73psbwplgc5ki65y5654yqc26pl"; depends=[forestplot MASS]; };
   CPE = derive2 { name="CPE"; version="1.4.4"; sha256="09sqp2a0j43jr9ya9piv8575rwd5fdvwmiz4chv75r3mw8p128mn"; depends=[rms survival]; };
   CPHshape = derive2 { name="CPHshape"; version="1.0.1"; sha256="05krqcd4spgghp3ihv1zfql6ikd64vkqnrjghjvfki3hi3zi5k7h"; depends=[]; };
-  CPMCGLM = derive2 { name="CPMCGLM"; version="1.1"; sha256="1w8yp37vxz2cl0yqdzpyxdfq2scz2h9i4crjzjmjzpzffi45f06s"; depends=[mvtnorm plyr]; };
+  CPMCGLM = derive2 { name="CPMCGLM"; version="1.2"; sha256="07hx2ik5zg05w1h6i94398mp54q958phws9ydgp6syjqlp9dpf1p"; depends=[abind mvtnorm plyr]; };
   CPsurv = derive2 { name="CPsurv"; version="1.0.0"; sha256="1r68pp3jbcbwgfac132h30qx6ah780aychr49rlncn17xbdalxsh"; depends=[muhaz survival]; };
   CR = derive2 { name="CR"; version="1.0"; sha256="0smb2i560dwbxg3mp1svfxmaiw193pd3klwqq0i27czf07k1xfvj"; depends=[]; };
   CRAC = derive2 { name="CRAC"; version="1.0"; sha256="0vnqmmmwakx5jnzqp20dng35p7rvmz3ypm2m7bs41m8nhh2wq1xa"; depends=[]; };
   CRANsearcher = derive2 { name="CRANsearcher"; version="1.0.0"; sha256="09gw1s28gb0l2cn4w3asl6zlr7wfacxwafbdrayajwckyfkjl5dl"; depends=[curl dplyr DT lubridate miniUI shiny shinyjs stringr]; };
-  CREAM = derive2 { name="CREAM"; version="1.0.0"; sha256="1w06vply6i0bdjj8v55jyyhpqr8qv7fsgr86qs2428vqs5g9yw2q"; depends=[]; };
+  CREAM = derive2 { name="CREAM"; version="1.1.0"; sha256="09mmfcgh5vfh4hq9vgsr1qsph7qq4w555j1j7zjcq69cfabp0np9"; depends=[]; };
   CRF = derive2 { name="CRF"; version="0.3-14"; sha256="0xhjj76730yjlpwbhcpdzqp7s37a9rhf4adk1s7hfb0jm8b76fgh"; depends=[Matrix Rglpk]; };
   CRM = derive2 { name="CRM"; version="1.1.1"; sha256="09h6xvqc2h2gxhdhc7592z93cnw16l549pn9i26ml0f0n20hljmf"; depends=[]; };
+  CRPClustering = derive2 { name="CRPClustering"; version="1.0"; sha256="1mr6wcfsgl3x9dx3sx1iav1i82r70jn985y7jkmvip0h9xslrk7g"; depends=[MASS mvtnorm png randomcoloR]; };
   CRTSize = derive2 { name="CRTSize"; version="1.0"; sha256="1d45zx26bf0zk0piham69gvb8djqf48g6iisbldv0ds3s2hhcsin"; depends=[]; };
   CRTgeeDR = derive2 { name="CRTgeeDR"; version="2.0"; sha256="1fzw8618k152b8d4d6wmzp0bfkz2grwp0rqsplwvfdx23nxq437n"; depends=[ggplot2 MASS Matrix]; };
   CSclone = derive2 { name="CSclone"; version="1.0"; sha256="0lqsqsgh2sf44fr1r7g179556v294yr1wy7x4320g7adxshrwyh5"; depends=[DNAcopy lpSolve mcclust moments]; };
-  CSeqpat = derive2 { name="CSeqpat"; version="0.1.0"; sha256="097r5hhq45wl783qakqs8j2b3315j1bvk9pcpssx6svkn507hh66"; depends=[NLP tm]; };
   CTM = derive2 { name="CTM"; version="0.2"; sha256="0h1lpygjq46nwkn4km49bngvxmgrnh3csrfln3yjr9yyzs7d3lz1"; depends=[jiebaR plyr]; };
-  CTT = derive2 { name="CTT"; version="2.3"; sha256="1vmyf5y2jf6p4vv667q9rj3fqijxxdha238ccsnylgw8fskhfy6i"; depends=[]; };
+  CTT = derive2 { name="CTT"; version="2.3.2"; sha256="1f4ba2qnxx5vlj64sxz4ynby9hv7f32v6ls8yn887z51m33xdxi8"; depends=[]; };
   CTTShiny = derive2 { name="CTTShiny"; version="0.1"; sha256="1c9vsiqyig6kfjpy3dfrysc466h4v9530m49aynz65i1njplswyh"; depends=[CTT ltm psych shiny shinyAce]; };
-  CUB = derive2 { name="CUB"; version="1.1.1"; sha256="1bix0spq480q79gvraadb8rzxbba6akqki2dxh6whd7h9zb86jpr"; depends=[Formula]; };
-  CUFF = derive2 { name="CUFF"; version="1.3"; sha256="1lv3gzh2wmw2dfmyc1fpxng221y1nr9qjxq8fjaxd71khcmzbykg"; depends=[openxlsx xtable]; };
+  CUB = derive2 { name="CUB"; version="1.1.2"; sha256="031jkzh6cr8gd2naqv54xs3vlrqmcbl9d2in66kd0dr2i41l3qj7"; depends=[Formula]; };
+  CUFF = derive2 { name="CUFF"; version="1.4"; sha256="01lx4ds1rlh7vndv13s11mhhamgsbqnsqjgd44iryfl3jmy3xfz3"; depends=[openxlsx xtable]; };
   CUMP = derive2 { name="CUMP"; version="2.0"; sha256="0rdscywmi4sylpjpr8r472iapddizb1mqyrd532cvw6frxins7w0"; depends=[]; };
   CUSUMdesign = derive2 { name="CUSUMdesign"; version="1.1.3"; sha256="149d16d5y7zxkzq8gmb5spfrvirv0vyhk2qx0v7vclkr8adz9sva"; depends=[]; };
   CVD = derive2 { name="CVD"; version="1.0.2"; sha256="0agb0liwbp4wvmxbyxgfb7471ki1agfb6ssh77kvwbkxqmrc8d96"; depends=[]; };
@@ -528,11 +542,11 @@ in with self; {
   CVTuningCov = derive2 { name="CVTuningCov"; version="1.0"; sha256="1bwzis82lqwcqp2djy4bnd3vvjr47krlv3pdc5msh12wcs0xhs7n"; depends=[]; };
   CVXR = derive2 { name="CVXR"; version="0.94-4"; sha256="0cnipvmrsikfy16sbnvypnhhpn4v8xczrnjnqgc3wkp454znqqhi"; depends=[bit64 ECOSolveR gmp Matrix R_utils R6 Rcpp RcppEigen Rmpfr scs]; };
   CVcalibration = derive2 { name="CVcalibration"; version="1.0-1"; sha256="0ca582fnysrldlzxc3pihsph9pvdgygdh7sfzgxvr5fc3z1jbjzb"; depends=[]; };
-  CaDENCE = derive2 { name="CaDENCE"; version="1.2.4"; sha256="1v6930wyh12jc2mrr4svg36nppxd1bqvcqardj2bjxzxzg998bq7"; depends=[pso]; };
+  CaDENCE = derive2 { name="CaDENCE"; version="1.2.5"; sha256="1z3p5y1l67r470x6wrhnyjvw1ndppcm08fpj99x122j7kn6byff2"; depends=[pso]; };
   Cairo = derive2 { name="Cairo"; version="1.5-9"; sha256="1x1q99r3r978rlkkm5gixkv03p0mcr6k7ydcqdmisrwnmrn7p1ia"; depends=[]; };
   Calculator_LR_FNs = derive2 { name="Calculator.LR.FNs"; version="1.2"; sha256="07g7ik3xb9ijghkz94qyk87c2d4q942h4d0yicwr1j1xzcv5qzsw"; depends=[]; };
   CalibrateSSB = derive2 { name="CalibrateSSB"; version="1.0"; sha256="1r3318rzh29cgq72gdp16z60xkan7hyh1vj4gjg3pzbxy8zawqxx"; depends=[survey]; };
-  Canopy = derive2 { name="Canopy"; version="1.2.0"; sha256="10z511vp9nmyf7jaihdx2367ddsnlrfg4rdzlz7rg9b5k9d92pja"; depends=[ape fields pheatmap scatterplot3d]; };
+  Canopy = derive2 { name="Canopy"; version="1.3.0"; sha256="0979hpphzhf4v71jx0shh3l8nffmpsn9l6f8ip2wxzcyx571i1wd"; depends=[ape fields pheatmap scatterplot3d]; };
   CarletonStats = derive2 { name="CarletonStats"; version="1.3"; sha256="1a8ic2ny2zkqy6xsnzhlc3hybhk200d8jbdbjfy7jav7n757kr0y"; depends=[]; };
   CatDyn = derive2 { name="CatDyn"; version="1.1-0"; sha256="0bdixcf1iwbmjd2axi6csrzms25ghdj4r6223qhk2b54wlmbzaiz"; depends=[BB optimx]; };
   CatEncoders = derive2 { name="CatEncoders"; version="0.1.1"; sha256="1q9wzq06lac8z9y8b65alsxpb48bw8wqmifd893kknk51xq6r9kl"; depends=[data_table Matrix]; };
@@ -554,14 +568,14 @@ in with self; {
   ChIPtest = derive2 { name="ChIPtest"; version="1.0"; sha256="1yn5b5s56k2dbhw6damxj18xbaiz180ym7fiq2i3p2gkcgwpddbz"; depends=[]; };
   ChainLadder = derive2 { name="ChainLadder"; version="0.2.5"; sha256="0023qbwyrb6vifsllws9jj1hlylmglzfc339d5rg8nhb50i4v6fd"; depends=[actuar cplm ggplot2 lattice MASS Matrix reshape2 statmod systemfit tweedie]; };
   ChangepointTesting = derive2 { name="ChangepointTesting"; version="1.0"; sha256="1nb78b1jpp0wpy9ah2fxkh53hlmb2f82b68msbfhancb8zp2lclv"; depends=[]; };
-  ChannelAttribution = derive2 { name="ChannelAttribution"; version="1.10"; sha256="1a1fzlp5fc5l357gklya096cwry26hymxrlpqsy1xdr60fd7pfx5"; depends=[Rcpp RcppArmadillo]; };
+  ChannelAttribution = derive2 { name="ChannelAttribution"; version="1.12"; sha256="0iz40xbkcjlydxnlm437iiy3pb8viqym6bwimhbjvm2v3dq5p8h5"; depends=[Rcpp RcppArmadillo]; };
   ChannelAttributionApp = derive2 { name="ChannelAttributionApp"; version="1.1"; sha256="0qy92ij1riynz7dhri3z85pafww5w9j1gx1bcgr8phlr32a7had7"; depends=[ChannelAttribution data_table ggplot2 shiny]; };
-  Chaos01 = derive2 { name="Chaos01"; version="1.0.1"; sha256="061z1cm55d0vxf9ly8hdhqb0qapqkyvhnfg44nnfh43a6a6kv339"; depends=[]; };
+  Chaos01 = derive2 { name="Chaos01"; version="1.1.1"; sha256="0ibxibmlyc6wkhqj2achwkwdkniin60y8xh8b80nq6ggmm7w9crw"; depends=[]; };
   ChaosGame = derive2 { name="ChaosGame"; version="0.3"; sha256="0nfp2qnhzpncs0yd5rknspin6c4hidqhxdd973ysiivg63wxwz8d"; depends=[colorRamps ggplot2 gridExtra plot3D RColorBrewer rgl sphereplot]; };
   CharFun = derive2 { name="CharFun"; version="0.1.0"; sha256="0cqy1na1lh9w3nspy68yylali9y5b64jlgh4fyzas556239dnyk7"; depends=[Bessel]; };
   ChargeTransport = derive2 { name="ChargeTransport"; version="1.0.2"; sha256="0mq06ckp3yyj5g1z2sla79fiqdk2nlbclm618frhqcgmq93h0vha"; depends=[]; };
   CheckDigit = derive2 { name="CheckDigit"; version="0.1-1"; sha256="0091q9f77a0n701n668zaghi6b2k3n2jlb1y91nghijkv32a7d0j"; depends=[]; };
-  ChemoSpec = derive2 { name="ChemoSpec"; version="4.4.85"; sha256="1wb9jvrsydia9lnc0pw55lngiqwa62ff02bfqj1slmr53nw864mp"; depends=[plyr]; };
+  ChemoSpec = derive2 { name="ChemoSpec"; version="4.4.97"; sha256="0kdcwv9kncv2r5mabp0mf9bmnajcnxmqavrl2lpn3d2pji6pv1qq"; depends=[plyr]; };
   ChemometricsWithR = derive2 { name="ChemometricsWithR"; version="0.1.11"; sha256="00z09bplm5qvd31y7m4b4knsrl0n27j9635m1gdak6lg4db4nxrd"; depends=[devtools kohonen MASS pls]; };
   ChoR = derive2 { name="ChoR"; version="0.0-3"; sha256="085p604zbk4l88q4ig2fnfhadxvsssyjl2r48g8s99yx49cvd9sx"; depends=[commonsMath rJava]; };
   ChocoLattes = derive2 { name="ChocoLattes"; version="0.1.0"; sha256="0ircdar4fswaf34969gzgn83ia891jvwl29jn4s9a87cc4qagzgr"; depends=[ggplot2 knitr plotly R_utils rmarkdown WriteXLS XML]; };
@@ -590,19 +604,20 @@ in with self; {
   ClustMMDD = derive2 { name="ClustMMDD"; version="1.0.4"; sha256="0sblf3crpai53dflhyi27yn6mg0xyy9dxhwsk8j57sq5vr50x686"; depends=[Rcpp]; };
   ClustOfVar = derive2 { name="ClustOfVar"; version="1.1"; sha256="0grhkab7s58ji4cf7cxh7ahd2dxrj8aqfdf3119b40zxkxbwxcr0"; depends=[PCAmixdata]; };
   ClustVarLV = derive2 { name="ClustVarLV"; version="1.5.1"; sha256="11zydj3iq15sg84kny6nklpmh8wj9j9nklkknzfqnaagai8jgsmy"; depends=[Rcpp]; };
+  Cluster_OBeu = derive2 { name="Cluster.OBeu"; version="1.2.1"; sha256="18is8aa496qr7afmyqy12s267ans0hhzy0xs8nzr3qp70mwrbbh1"; depends=[car cluster clValid data_tree dendextend jsonlite mclust RCurl reshape reshape2 stringr tibble]; };
   ClusterBootstrap = derive2 { name="ClusterBootstrap"; version="0.9.3"; sha256="1znyj39mwdi02xhypvr2fsx2yp45w8br7r8qkn831d6fza5pkcyc"; depends=[]; };
-  ClusterR = derive2 { name="ClusterR"; version="1.0.8"; sha256="187n61b5gibsi6wxx5mhx43grzrhqnj5b6pw43m50siw4s6krr0f"; depends=[FD ggplot2 gmp gtools OpenImageR Rcpp RcppArmadillo]; };
+  ClusterR = derive2 { name="ClusterR"; version="1.1.0"; sha256="1bin170587cs8awpvjb8g2nvzqklscg8n39lhhayn33wshmbdd8s"; depends=[FD ggplot2 gmp gtools OpenImageR Rcpp RcppArmadillo]; };
   ClusterRankTest = derive2 { name="ClusterRankTest"; version="1.0"; sha256="01gzalhibqcdx3a6yc2cm1v77rscva73v5m5m0qkrgqdp9c8ph2a"; depends=[]; };
   ClusterStability = derive2 { name="ClusterStability"; version="1.0.3"; sha256="1laa5m3y1rc7jr8q3i9qb3izs7qmadz169w9xm8q3mm3834ngn9b"; depends=[cluster clusterCrit copula Rcpp WeightedCluster]; };
   ClusteredMutations = derive2 { name="ClusteredMutations"; version="1.0.1"; sha256="1n31nnvpjh1faw751k8m3ga3wfl0yhdpnszwckqhfzlma1jr8z04"; depends=[seriation]; };
-  CoClust = derive2 { name="CoClust"; version="0.3-1"; sha256="00i0dghd35s91kkkxj1ywa5i93752mfa5527ifclw4xxxshppva8"; depends=[copula gtools]; };
+  CoClust = derive2 { name="CoClust"; version="0.3-2"; sha256="04xv807785xv9kdspsspx1302ardv8gda06kd590lgawjixai7dh"; depends=[copula gtools]; };
+  CoDiNA = derive2 { name="CoDiNA"; version="1.0.0"; sha256="1anc127d4xx1yks5kq2glcv8sijs0sfab9wjs7j9g1aqp97hmk33"; depends=[data_table geometry igraph magrittr plot3D plyr reshape2 visNetwork]; };
   CoFRA = derive2 { name="CoFRA"; version="0.1002"; sha256="0ldf84dxaanww3qkf64mz5gv3yv2rjp9m6dy64xckds66vw6x0m3"; depends=[gplots stringr]; };
   CoImp = derive2 { name="CoImp"; version="0.3-1"; sha256="0zj152w4cvnbfl144ggs3ixmyywxf9dqhh04jfydmv2a8n6px89n"; depends=[copula gtools locfit nnet]; };
-  CoSeg = derive2 { name="CoSeg"; version="0.38"; sha256="1fkaq5zwy8j17jvpv0kzmq40km83qn9s556661ghknzp7w8flih8"; depends=[fGarch kinship2]; };
   CodeDepends = derive2 { name="CodeDepends"; version="0.5-3"; sha256="03p82s0abca2jimzqvxdzykfzca7c7fhm5xsjxybcksr4gggr5sc"; depends=[codetools XML]; };
   CoinMinD = derive2 { name="CoinMinD"; version="1.1"; sha256="0invnbj5589wbs0k2w5aq9qak7axc3s0g9nw85c48lnl0v95s91i"; depends=[MCMCpack]; };
   CollapsABEL = derive2 { name="CollapsABEL"; version="0.10.11"; sha256="0libm1wv34av3vm2vvbqcnxjh4y1rwfi8qzjca8qdz9490vngags"; depends=[biganalytics bigmemory collUtils dplyr ggplot2 haplo_stats R_utils rJava RSQLite stringr]; };
-  CollapseLevels = derive2 { name="CollapseLevels"; version="0.1.0"; sha256="0h2grvj5nd8lfwl5fqzp9lrhnl72jmamfyd1bsr37ck3nbbbf3q1"; depends=[dplyr ggplot2 lazyeval magrittr]; };
+  CollapseLevels = derive2 { name="CollapseLevels"; version="0.2.0"; sha256="1fn5k83lh0vw5j9vhq0x6ksbkrm25acpslav85wfyknsj9vzmzid"; depends=[dplyr ggplot2 lazyeval magrittr]; };
   CollocInfer = derive2 { name="CollocInfer"; version="1.0.4"; sha256="1iwf5g2y7i0j8dc19hdhya4m6g47jj968glnclj7a2yaq2yx37cj"; depends=[deSolve fda MASS Matrix spam]; };
   ColorPalette = derive2 { name="ColorPalette"; version="1.0-1"; sha256="1dsj5njikx3qm2lnamqqg4qgwwyr11fwx9s5sdi7dkfx3nmf6dac"; depends=[]; };
   ComICS = derive2 { name="ComICS"; version="1.0.3"; sha256="1jfs0ygr88532jjw2ablyn2r3sg3hfsv5yrm4gkdgzakychj3dy2"; depends=[glmnet]; };
@@ -626,8 +641,8 @@ in with self; {
   CompareCausalNetworks = derive2 { name="CompareCausalNetworks"; version="0.1.9"; sha256="086yacr5fgqzgl1hh0m6qpx59smk66bsxglaic3ynd9n9k1n9p6c"; depends=[data_table expm Matrix]; };
   CompareTests = derive2 { name="CompareTests"; version="1.2"; sha256="1z96kh851bpr2szgyjszkpv6m5ma6abz7hrm50fgvfpgxkj7f4yi"; depends=[]; };
   CompetingRisk = derive2 { name="CompetingRisk"; version="1.0"; sha256="0lfpqz3a8csgmv8cg4clc1dzsgxvssfr5cyn1mgyxfzssch85drm"; depends=[MASS Matrix reshape2 survival wesanderson]; };
-  Compind = derive2 { name="Compind"; version="1.2"; sha256="0xlsfrgh3pk0vfwhp81108fpcbhlddv31w449744rhpwzjbnx04b"; depends=[Benchmarking boot GPArotation Hmisc lpSolve MASS nonparaeff psych]; };
-  Compositional = derive2 { name="Compositional"; version="2.7"; sha256="1g304zfpvi2pj4adlc9rhbbik7zgs73bfysm7dy2zpg65ac9jkig"; depends=[doParallel emplik fields foreach MASS mixture Rfast sn]; };
+  Compind = derive2 { name="Compind"; version="2.0"; sha256="1qadyl96c9cmk1i763gc055hgv414ha59418lqk183kwl5sgbqy5"; depends=[Benchmarking boot GPArotation Hmisc lpSolve MASS nonparaeff np psych smaa spdep]; };
+  Compositional = derive2 { name="Compositional"; version="2.8"; sha256="13658sa6x058ldvhawvwypi7pzija633bm3q6bb0pw7alirdabd1"; depends=[doParallel emplik fields foreach MASS mixture Rfast sn]; };
   Compounding = derive2 { name="Compounding"; version="1.0.2"; sha256="1xlb3ylwjv70850agir0mx79kcvs43h0n1sm22zcny3509s2r7lf"; depends=[hypergeo]; };
   ConConPiWiFun = derive2 { name="ConConPiWiFun"; version="0.4.6"; sha256="1kkc4xp5b6q54b76wk4ga28wl668psbpyivl6bnh3xm21276yx5k"; depends=[Rcpp]; };
   ConR = derive2 { name="ConR"; version="1.2.1"; sha256="0k6761x5dfibbbzfzmkc73ahfmw54d5rpj0rj32232qdlk48hqk5"; depends=[fields geosphere maptools raster rgdal rgeos sp spatstat spatstat_utils]; };
@@ -641,9 +656,10 @@ in with self; {
   ConjointChecks = derive2 { name="ConjointChecks"; version="0.0.9"; sha256="097mhiz8zjmmkiiapr3zfx7v35xirg57nqp1swd72dixaa23nhr1"; depends=[]; };
   ConnMatTools = derive2 { name="ConnMatTools"; version="0.3.3"; sha256="0zsn3al3di0fd9hkqljpqqy4zbmh97xr6cdi4fzv80ax81fjfqyk"; depends=[]; };
   ConsRank = derive2 { name="ConsRank"; version="2.0.1"; sha256="18f1gqa46f8jrcf2zj4njyy78cl0scjs9k8s9mvg0f9dpr44xnan"; depends=[gtools proxy rgl]; };
-  ContaminatedMixt = derive2 { name="ContaminatedMixt"; version="1.2"; sha256="19h2pdzfr7bqsnjzwalwq1hanp52vwkkm6f55q3rsfcf8wl392rn"; depends=[caret mclust mixture mnormt mvtnorm]; };
+  ContaminatedMixt = derive2 { name="ContaminatedMixt"; version="1.3.2"; sha256="0761wfjxh26kf4q1qcfzfaj52553yiw1ny6l84r3wzzx4hv893qy"; depends=[caret mclust mixture mnormt mvtnorm]; };
   ContourFunctions = derive2 { name="ContourFunctions"; version="0.1.0"; sha256="1hlff3wx8r1wpkhrz0n27wjnzy6z2q8s9smyb906gwwa9xga7njy"; depends=[]; };
   ConvCalendar = derive2 { name="ConvCalendar"; version="1.2"; sha256="0yq9a42gw3pxxwvpbj6zz5a5zl7g5vkswq3mjjv5r28zwa3v05vc"; depends=[]; };
+  ConvergenceClubs = derive2 { name="ConvergenceClubs"; version="1.0.0"; sha256="0ndb7k2lfv6014a7c61a2mmcsywpa478lk6fh7d0jkv55hmnzvs9"; depends=[lmtest sandwich]; };
   ConvergenceConcepts = derive2 { name="ConvergenceConcepts"; version="1.2.1"; sha256="0kl67ds6369mxl2i93h43r00ji12qkg0k9m4jhcxsb0ydd8rfqgp"; depends=[lattice tkrplot]; };
   CoordinateCleaner = derive2 { name="CoordinateCleaner"; version="1.0-2"; sha256="18l25hllw4f8pgcj5vrqinjqs1qns74bnw7cnq24p9pcdp218zkg"; depends=[geosphere ggplot2 raster rgeos rnaturalearth sp]; };
   Copula_Markov = derive2 { name="Copula.Markov"; version="1.1"; sha256="0pgzrgd9bzf2qh9b7h0y4mmszlxk1wxdwlid3xh7rk7pif3mw3qd"; depends=[]; };
@@ -657,8 +673,9 @@ in with self; {
   CorporaCoCo = derive2 { name="CorporaCoCo"; version="1.1-0"; sha256="1s3wlcy6mnw9riivw5lc4gd6bjbsd77m15ipr95g46isdcrli8zb"; depends=[data_table RColorBrewer rlist]; };
   CorrBin = derive2 { name="CorrBin"; version="1.5"; sha256="1kg8kms76z127j2vmf7v162n0sh2jqylw4i7c35x5sig4q22m9gy"; depends=[boot combinat dirmult geepack mvtnorm]; };
   CorrMixed = derive2 { name="CorrMixed"; version="0.1-13"; sha256="02zg5kmv5qxnasnz872r3z7x7dmdcniq1x5xyfnnb3niwkdjgxzx"; depends=[nlme psych]; };
-  CorrToolBox = derive2 { name="CorrToolBox"; version="1.4"; sha256="15x9l4swgrbry10k5iws75xs4bbh7mpcg4f4fx9yd9z92yq72ly2"; depends=[BinNonNor BinOrdNonNor GenOrd moments mvtnorm psych]; };
+  CorrToolBox = derive2 { name="CorrToolBox"; version="1.5"; sha256="1ggrm144zmi54cqb5l2nif7dn1zb1kn31i1xhxc4jwr7fn380iyi"; depends=[BinNonNor BinOrdNonNor GenOrd moments mvtnorm psych]; };
   CorrectOverloadedPeaks = derive2 { name="CorrectOverloadedPeaks"; version="1.2.14"; sha256="1if4qb1d6mg3435pk3znln8id8fj12n3j9sjv4zn104v2fr90mhr"; depends=[caTools digest xcms XML]; };
+  CorrectedFDR = derive2 { name="CorrectedFDR"; version="1.0"; sha256="15047cfjniljzhznkbzq3hyq221y9k7fa04f69zm0k0sxr627gxg"; depends=[]; };
   Correlplot = derive2 { name="Correlplot"; version="1.0-2"; sha256="0prxnbi7ga5d23i0i4qpynfb3zrsgjxam47km6nsj1prakdkrq7w"; depends=[calibrate xtable]; };
   CosW = derive2 { name="CosW"; version="0.1"; sha256="12l4w8b5jnr8773hxk7khrdn705x6bdbw7s8z8w95bfbbi12dj6v"; depends=[fdrtool pracma]; };
   CosmoPhotoz = derive2 { name="CosmoPhotoz"; version="0.1"; sha256="04girid6wvgyrk8ha81mdqjx2mmzifz57l1hzcgrdnzmjmm3vlmp"; depends=[arm COUNT ggplot2 ggthemes gridExtra mvtnorm pcaPP shiny]; };
@@ -667,7 +684,7 @@ in with self; {
   CountsEPPM = derive2 { name="CountsEPPM"; version="2.1"; sha256="1w1l4kbk8c2prq7f38maz0fc44j9za6cmj0vydmcgscb9s6f3mg7"; depends=[expm Formula numDeriv]; };
   CovSel = derive2 { name="CovSel"; version="1.2.1"; sha256="02fsiykbg96ynqw25vfyrams7fs39xjmfhvb23zjbqb7ql6d0xdk"; depends=[dr MASS np]; };
   CovSelHigh = derive2 { name="CovSelHigh"; version="1.1.1"; sha256="0dvvpkqml2k00gicpgp475z1rjspq3s37ys1mam29k54qlshhny6"; depends=[bartMachine bindata bnlearn doParallel doRNG foreach glmnet MASS Matching randomForest tmle xtable]; };
-  CovTools = derive2 { name="CovTools"; version="0.2.1"; sha256="0f5d68hwd86bsvyrv5qxvppb7d0pvh6kj9bmbhdid7wh8v0dxfx9"; depends=[doParallel expm foreach geigen Matrix mvtnorm pracma Rcpp RcppArmadillo shapes]; };
+  CovTools = derive2 { name="CovTools"; version="0.3.0"; sha256="0p5mfrdp4p5fz9ld0rqrd2kj73hi1dzx0iwl4rihhgfgdplzknhf"; depends=[doParallel expm foreach geigen Matrix mvtnorm pracma Rcpp RcppArmadillo Rdpack shapes]; };
   CoxBoost = derive2 { name="CoxBoost"; version="1.4"; sha256="1bxkanc8zr4g3abn4ds5wqibv65flvm4y648fs9s0l4vc9vmyshg"; depends=[Matrix prodlim survival]; };
   CoxPlus = derive2 { name="CoxPlus"; version="1.1.1"; sha256="038wsz206bgc0pnzx403b5ihcwhxpkrpxmwvrvqcxf8333pb62l5"; depends=[Rcpp RcppArmadillo]; };
   CoxRidge = derive2 { name="CoxRidge"; version="0.9.2"; sha256="0p65mg4hzdgks03k1lj90yj6qbk50s94rwvcwzkb5xxxwrijd10r"; depends=[survival]; };
@@ -676,7 +693,7 @@ in with self; {
   CpGassoc = derive2 { name="CpGassoc"; version="2.60"; sha256="1zx18x8pxjl2ajnj7a7lb8383m75ysg17f4mzz0vkgl5mnf617ny"; depends=[nlme]; };
   Cprob = derive2 { name="Cprob"; version="1.4"; sha256="1kjw5hhb3fy12xlyg01i8ynl78gx0r57kvmgafbqix1s3pg2hyw6"; depends=[geepack lattice lgtdl prodlim tpr]; };
   CreditMetrics = derive2 { name="CreditMetrics"; version="0.0-2"; sha256="16g3xw8r6axqwqv2f0bbqmwicgyx7nwzff59dz967iqna1wh3spi"; depends=[]; };
-  CreditRisk = derive2 { name="CreditRisk"; version="0.1.1"; sha256="0fd6jyd3slr7p14d1gh49fpknk4smdnzsvz29xwayh3zbizr686a"; depends=[fOptions]; };
+  CreditRisk = derive2 { name="CreditRisk"; version="0.1.3"; sha256="09ks8xlsrbp3an1drcwmmd6df4fsfz61z21ma2p62a1pk0bnc86c"; depends=[fOptions]; };
   CrossClustering = derive2 { name="CrossClustering"; version="3.0"; sha256="0l9cdniqf63x4pfkf6y7c2qh056jwadqw45nz9jk78wamqq8hyqv"; depends=[cluster]; };
   CrossScreening = derive2 { name="CrossScreening"; version="0.1.1"; sha256="1gig80r8p611ysn35ajx7xdjj5wnkcf1vspcf0i06dmh75xpm3w9"; depends=[plyr tables]; };
   CrossVA = derive2 { name="CrossVA"; version="0.9.1"; sha256="13skbazs1mh5am70qlwxhvxgfx4gwlzzq6zy3vdzaa3zbykkxlvw"; depends=[lubridate]; };
@@ -684,19 +701,21 @@ in with self; {
   Crossover = derive2 { name="Crossover"; version="0.1-17"; sha256="168j8fl6h7x1pia5f5c18yrf0y1lvznib8clq1mv0imb7cjzkkhi"; depends=[CommonJavaJars crossdes digest ggplot2 JavaGD MASS Matrix multcomp Rcpp RcppArmadillo rJava xtable]; };
   CryptRndTest = derive2 { name="CryptRndTest"; version="1.2.2"; sha256="1cg0agwqp1f7pgxdf9wilwparklyfsv900r47fpihnqw3ycvbdai"; depends=[gmp kSamples LambertW MissMech Rmpfr sfsmisc tseries]; };
   CrypticIBDcheck = derive2 { name="CrypticIBDcheck"; version="0.3-1"; sha256="1lrpwgvsif1wnp19agh8fs3nhlb7prr3hhqg28fi4ikdd1l2j3r4"; depends=[car chopsticks ellipse rJPSGCS]; };
+  CsChange = derive2 { name="CsChange"; version="0.1.3"; sha256="08ss1dzwirmnlgw440g3k3vnrl1imhmd2gljnid8z2dzj5450alr"; depends=[boot Hmisc rms survival]; };
   CuCubes = derive2 { name="CuCubes"; version="0.1.0"; sha256="1cpazar85rp8xfjvy0vxivr61grzvxz7a9mirxvhynln964by6ns"; depends=[]; };
-  Cubist = derive2 { name="Cubist"; version="0.2.0"; sha256="1cf0x5yg6jbjqmnzf9cg5jd50iwvz9l8f232cms321pwnrr1550z"; depends=[lattice reshape2]; };
+  Cubist = derive2 { name="Cubist"; version="0.2.1"; sha256="18w82l44b6jsmz19l34dmaqb22qvjcwhs4cddzhs6pzicvqw645k"; depends=[lattice reshape2]; };
   Cyclops = derive2 { name="Cyclops"; version="1.3.0"; sha256="0sznzzz21qn1cxxfa3wiwvfza7lykzzf0xyqvawha9vzm8qzgqnq"; depends=[BH bit ff ffbase Matrix Rcpp RcppEigen RcppParallel survival]; };
   CytobankAPI = derive2 { name="CytobankAPI"; version="1.1.0"; sha256="1014r17krw74drykdlw24pgqylidp8yxa00zhf340ilcxfpacxyi"; depends=[curl httr jsonlite]; };
   CytobankAPIstats = derive2 { name="CytobankAPIstats"; version="1.0"; sha256="0hr74igy43d5ybzlgqpvx9ingw6h83w502b6k55cp6zqcv5rl8d5"; depends=[CytobankAPI]; };
+  CytobankBridgeR = derive2 { name="CytobankBridgeR"; version="1.0.0"; sha256="0m8gxbm3p9gvdszymqx10n5rzb406r4f70a0in798c56mp2rcsl4"; depends=[CytobankAPI]; };
   D2C = derive2 { name="D2C"; version="1.2.1"; sha256="0qhq27978id0plyz9mgdi0r1sr3ixnvqm8w6hp5c2wjd1yhhh12s"; depends=[corpcor foreach gRbase lazy MASS randomForest RBGL Rgraphviz]; };
   D3GB = derive2 { name="D3GB"; version="1.1"; sha256="1r4hxx2qdws7c7hsnswzfh6az8mn720sk8nygilljl2ghnwpq7pa"; depends=[DBI RSQLite]; };
-  D3M = derive2 { name="D3M"; version="0.41.1"; sha256="1qr50xq5zccb16a1rgzfbb9bz8bbnxxb522nb8ga159nmb4cwjmp"; depends=[beanplot Rcpp]; };
   D3partitionR = derive2 { name="D3partitionR"; version="0.5.0"; sha256="10067rdgbpjzgw2wiq75kdd0gd7bl41hp16sxc0k2p72ybqfpw03"; depends=[data_table functional htmlwidgets magrittr RColorBrewer titanic]; };
   DAAG = derive2 { name="DAAG"; version="1.22"; sha256="16xp4qk09v9jwm4cs7b4mpn0kgl1va9rw86viwcjc54vjc32953f"; depends=[lattice latticeExtra]; };
   DAAGbio = derive2 { name="DAAGbio"; version="0.63-3"; sha256="0n82d9nsvpl6cwp95by8ff9fmdafs2fdi603dlik5890adaw42x4"; depends=[limma]; };
   DAAGxtras = derive2 { name="DAAGxtras"; version="0.8-4"; sha256="18lg13mbyharidj5j7ncx8s7d72v2hcnqr00vilhf3djk2mjq7xn"; depends=[]; };
   DAC = derive2 { name="DAC"; version="0.1.0"; sha256="0x27asjn1y8bxgc35ic4jpara4f7vn8w61fpg4glkjy5nbh5ss0p"; depends=[fGarch flexmix]; };
+  DACF = derive2 { name="DACF"; version="1.0.0"; sha256="0hv7c9lk6ivj4iz953yn11iy5p611q4si4ghn9d5a9i229s5hig8"; depends=[]; };
   DAGGER = derive2 { name="DAGGER"; version="1.4"; sha256="0b2hzv001xhch7pqgb53lfpdcjwg5lj33i6pb884l1kx92svjfr7"; depends=[Matrix quadprog Rglpk]; };
   DAISIE = derive2 { name="DAISIE"; version="1.4"; sha256="16653wwz20lhf3bpzflpj5d1h7j3cqyfaqk5gn24aifga2jc0wbb"; depends=[DDD deSolve Matrix subplex tensor]; };
   DAKS = derive2 { name="DAKS"; version="2.1-3"; sha256="0vmpwxvksnmyq40faimbgpj0y3zbk519986n38ipwdfzllcg0zs4"; depends=[relations sets]; };
@@ -707,7 +726,7 @@ in with self; {
   DBEST = derive2 { name="DBEST"; version="1.8"; sha256="1a598g02hpfgv572gchllqkppynnsp4lx764jg0g66w3b66k0kdy"; depends=[zoo]; };
   DBGSA = derive2 { name="DBGSA"; version="1.2"; sha256="04zqh9y3nqcdzs5jn8aaq5idy9zl450ikvl788xs860wlg692qv2"; depends=[fdrtool]; };
   DBI = derive2 { name="DBI"; version="0.7"; sha256="04fyrxdpqcygg5wviy637y6lgk64xqjjq31lvv4hwqj5kbaxamr5"; depends=[]; };
-  DBItest = derive2 { name="DBItest"; version="1.5"; sha256="1mhygy6wdw22r43jcisyxc852q1lbzx4xi387csf2zqgl86xldw4"; depends=[blob DBI desc hms R6 testthat withr]; };
+  DBItest = derive2 { name="DBItest"; version="1.5-2"; sha256="05wizjm2b97fsdha2i391h38xb0zrkhnd036qvdcm0r5l0y56sm8"; depends=[blob DBI desc hms R6 testthat withr]; };
   DBKGrad = derive2 { name="DBKGrad"; version="1.6"; sha256="0207zx0v1x3zhfbs0h1ssxc1b683k111f90k8ybhknb147104knr"; depends=[lattice minpack_lm SDD TSA]; };
   DCA = derive2 { name="DCA"; version="2.0"; sha256="1acy33vyf814kr0aj6kdvi9f1qzgynwwzv57ll01gd0iqq36374f"; depends=[coin elasticnet GPArotation locfdr modeest mvtnorm PMA]; };
   DCD = derive2 { name="DCD"; version="0.1.0"; sha256="0p6vk8fdvpcvb1bb5fwy3h1v8y3djlvcm5jl5lnx30ngqj6d7rcj"; depends=[data_table doParallel foreach ggplot2 igraph lattice lsa Matrix plyr qlcMatrix Rdpack ROCR WGCNA]; };
@@ -719,7 +738,7 @@ in with self; {
   DCchoice = derive2 { name="DCchoice"; version="0.0.15"; sha256="1qdqn45ipq0806r25ri4aygzq48k8j5k8rlhi1cafym421yq6bfg"; depends=[Formula interval MASS]; };
   DCluster = derive2 { name="DCluster"; version="0.2-7"; sha256="008nyry64s5g80narcc58273v0jhqzfgwynka6mh7jgi7qsqnxjd"; depends=[boot MASS spdep]; };
   DClusterm = derive2 { name="DClusterm"; version="0.1"; sha256="0xkl4677vqy4sdkm0fczscqszjxk1kfmlbzdgm88shcnjzjg71d8"; depends=[DCluster gridExtra latticeExtra lme4 pscl RColorBrewer sp spacetime xts]; };
-  DDD = derive2 { name="DDD"; version="3.5"; sha256="1kchgp6h0gmmiszi4cxrzixhfs4qvii33c71daddxbgaqdgw7c6z"; depends=[ade4 ape deSolve expoRkit Matrix phytools pracma SparseM subplex]; };
+  DDD = derive2 { name="DDD"; version="3.6"; sha256="0lkij10z6bviay2dg6k5pmb9ddg4smcz96fkww0qx8h636zd2xlq"; depends=[ade4 ape deSolve expoRkit Matrix phytools pracma SparseM subplex]; };
   DDHFm = derive2 { name="DDHFm"; version="1.1.2"; sha256="0lgh6kcfas06p2yy7zy21r05k5521xbj5af3wwwssp5li1cia35g"; depends=[lokern wavethresh]; };
   DDIwR = derive2 { name="DDIwR"; version="0.2-0"; sha256="0dqbldl5c6b8i5q3yk0hwd12lp8z9j4ilnmsqrkj69fv7mys9q3k"; depends=[foreign XML]; };
   DDM = derive2 { name="DDM"; version="1.0-0"; sha256="19g06qk3lzasj294x9wfij729mlq6ryvjqkn3rgl5xp1w0gx9wi2"; depends=[]; };
@@ -729,7 +748,6 @@ in with self; {
   DEMEtics = derive2 { name="DEMEtics"; version="0.8-7"; sha256="1s59qim60d4gp5rxjacdbmxdbpdm7cy9samn088w8fs0q232vjjx"; depends=[]; };
   DEMOVA = derive2 { name="DEMOVA"; version="1.0"; sha256="09dqhhhihphhdnplmhdq4q5zwc0qvqhirdrxa9x6fr43vwa5zfp4"; depends=[leaps]; };
   DES = derive2 { name="DES"; version="1.0.0"; sha256="16p38i8ykwc8gjw6c9dhdwjjpa1b17n9wqhz3rhkbzjh978pky31"; depends=[]; };
-  DESP = derive2 { name="DESP"; version="0.2-2"; sha256="1s5x6x36ra83izcyrgdzc26a02cbbgy3xxn32sl30z6srys1j3j3"; depends=[graph MASS Matrix RBGL SparseM]; };
   DESnowball = derive2 { name="DESnowball"; version="1.0"; sha256="012kdnxmzap6afc3ffkcvk1mazlkp286av6g9fwz2wcbf5mh9n1m"; depends=[clue cluster combinat MASS]; };
   DEoptim = derive2 { name="DEoptim"; version="2.2-4"; sha256="10nlsvms5pf0wmn4z1lj6vnmpwr10q8nhdy5xy9rn7hd1627fm0a"; depends=[]; };
   DEoptimR = derive2 { name="DEoptimR"; version="1.0-8"; sha256="1vz546hyjyhly70z62h5n3mn62b8llhhmim8ffp9y6jnnb0i2sc4"; depends=[]; };
@@ -746,7 +764,7 @@ in with self; {
   DJL = derive2 { name="DJL"; version="2.6"; sha256="1vvfh9hpanac2g22k4hqy3y7j3mn34mvasw0rx3y4vjbv3h05yw6"; depends=[car lpSolveAPI]; };
   DLASSO = derive2 { name="DLASSO"; version="2.0.2"; sha256="0xdygf6h89d9z4kqb46iqfxgdzq9dmkrxf9ypw78l4d8n9xx2gaa"; depends=[MASS]; };
   DLMtool = derive2 { name="DLMtool"; version="5.0.2"; sha256="0fz8qy3328wmxqg5s13bl2qr4f54zc2bk4amb9kz490vf00by0iw"; depends=[abind coda devtools ggplot2 ggrepel gridExtra knitr LBSPR MASS mvtnorm openxlsx r4ss Rcpp RcppArmadillo readxl rmarkdown snowfall]; };
-  DMMF = derive2 { name="DMMF"; version="0.3.2.0"; sha256="17v7ksmknbgh7h9k2l6mgkykg0rq352nlw585yhfck0bvvb5vdb3"; depends=[raster rgdal sp]; };
+  DMMF = derive2 { name="DMMF"; version="0.4.0.1"; sha256="0fypj0a0kjzfghazs55mxkig9n3ngjmbi3xmdxkpa35jbn71bfdd"; depends=[raster rgdal sp]; };
   DMR = derive2 { name="DMR"; version="2.0"; sha256="1kal3bvhwqs00b6p6kl0ja35pcz9v9y569148qfhy94m319fcpzm"; depends=[magic]; };
   DMRMark = derive2 { name="DMRMark"; version="1.1.1"; sha256="15wr6j0v9kvbv8y6flkp4svfqy059ziv89nxv91vp0pjmavhpdlz"; depends=[ellipse MCMCpack mvtnorm]; };
   DMRnet = derive2 { name="DMRnet"; version="0.1.0"; sha256="0p5iyj6zqrv1hsfdq7bp96ly8dkf2ky6gzilrha336lhm35ym7sr"; depends=[glmnet grpreg]; };
@@ -756,16 +774,16 @@ in with self; {
   DNAtools = derive2 { name="DNAtools"; version="0.1-22"; sha256="1kkqbzwbivd78lpphsn9xqdxqc46ng6f86nqns18gq0s2g8gvys1"; depends=[multicool Rcpp Rsolnp]; };
   DNLC = derive2 { name="DNLC"; version="1.0.0"; sha256="05410xgpfjsydjmnzry454qcjpws9vhh252q2xq7l0scdj87ly00"; depends=[caTools fdrtool GOstats igraph locfdr mvtnorm spdep]; };
   DNMF = derive2 { name="DNMF"; version="1.3"; sha256="09yp6x6vd44ahklcag96fpjgyphyn45rkqkbwr1n36a2d8vxk9nc"; depends=[doParallel foreach gplots Matrix]; };
-  DOBAD = derive2 { name="DOBAD"; version="1.0.5"; sha256="0nvjs4vsbl1db4g0yyrqyllawhvrzv1lgs6gmn49iqvajxyrpnvi"; depends=[lattice numDeriv]; };
+  DNetFinder = derive2 { name="DNetFinder"; version="1.0"; sha256="0q56c2389qaq3wsqpj8s95ncm0xmbl1slr0jmpixb48hhgk0l0ji"; depends=[flare]; };
+  DOBAD = derive2 { name="DOBAD"; version="1.0.6"; sha256="0ifrrfm4yp1416z58qgnak042rgj1xvqby2vvzgrv19z6b3250p3"; depends=[lattice Matrix numDeriv]; };
   DODR = derive2 { name="DODR"; version="0.99.2"; sha256="16ia9j8vab8n2i6a17wz8nfvkfgj2gsyhxvwgxvjg2cz99hsbhdj"; depends=[Matrix npsm Rfit]; };
   DOT = derive2 { name="DOT"; version="0.1"; sha256="0qh5n57cp9c2n5yn59q4wggz82943pwfanp3kx869aba2x3sj30i"; depends=[V8]; };
   DOvalidation = derive2 { name="DOvalidation"; version="1.1.0"; sha256="1mzws3w7djpxnfqxjcqwgia7p17kb0qlnzj6qcfg2m1vamb1cn2z"; depends=[]; };
   DPBBM = derive2 { name="DPBBM"; version="0.2.5"; sha256="1qypxrcm3sb727lqb09ssjf3hblixqayw3qsyql01imrxwm609i2"; depends=[CEoptim gplots tmvtnorm VGAM]; };
-  DPP = derive2 { name="DPP"; version="0.1.1"; sha256="0mpamnypdhg4fggz29k6vh5kksg6n8sv6v5jjka7901lhxwydlvn"; depends=[coda Rcpp]; };
-  DPpackage = derive2 { name="DPpackage"; version="1.1-7"; sha256="027zwznkqn2ny21dqvmk1fclzxnvsf8lpn1ks0rbigc58df4cvx2"; depends=[MASS nlme survival]; };
+  DPpackage = derive2 { name="DPpackage"; version="1.1-7.4"; sha256="0lfw55kbjwr1dqkd98p6488p6c0nh5pkfkc9wpds8wsqm38siad6"; depends=[MASS nlme survival]; };
   DREGAR = derive2 { name="DREGAR"; version="0.1.3.0"; sha256="15cplshs85r0z659mc7xmj5db7vc95wxs01c34isc22p8z0a287i"; depends=[msgps]; };
   DRIP = derive2 { name="DRIP"; version="1.1"; sha256="050xfq30fp9m03ig938bci2haiglj6jj4k327fpz7r2y78cgcnn4"; depends=[caTools readbitmap]; };
-  DRR = derive2 { name="DRR"; version="0.0.2"; sha256="1scfwp6ry6apxzqjclsmn2frxp9qfw6zxsxn5w0j0q3sz42hz1h2"; depends=[CVST kernlab Matrix]; };
+  DRR = derive2 { name="DRR"; version="0.0.3"; sha256="1yd1fvllfkcrwg9v322n4wkk4q4q84nvy58y4vac9pdr3yf3i4vl"; depends=[CVST kernlab Matrix]; };
   DRaWR = derive2 { name="DRaWR"; version="1.0.1"; sha256="1pfdczwzd236c64yw94bgbk0hbl4dhlgjfjwkljmqgqrzsddvgqh"; depends=[Matrix ROCR]; };
   DSAIDE = derive2 { name="DSAIDE"; version="0.6.0"; sha256="0jg5shgq1f9k0fcpzkpynd87xfcj8ky09xsz8n8yfvy4fw8d77kl"; depends=[adaptivetau deSolve knitr shiny]; };
   DSBayes = derive2 { name="DSBayes"; version="1.1"; sha256="0iv4l11dww45qg8x6xcf82f9rcz8bcb9w1mj7c7ha9glv5sfb25v"; depends=[BB]; };
@@ -774,7 +792,7 @@ in with self; {
   DSsim = derive2 { name="DSsim"; version="1.1.2"; sha256="1n46r7nn2wl8xnc22wf91mcz745yzx83g8nk5mmj429j3i0sfd77"; depends=[fields mgcv mrds rgeos shapefiles sp splancs]; };
   DStree = derive2 { name="DStree"; version="1.0"; sha256="14wba25ylmsyrndh007kl377dv4r34wr1555yxl6kyxrs4yg3jir"; depends=[Ecdat pec Rcpp rpart rpart_plot survival]; };
   DSviaDRM = derive2 { name="DSviaDRM"; version="1.0"; sha256="1hj2pgnldrpgapwwz1kf4k6mvyzwdvb1i6czd7sbimsx5hafwps8"; depends=[igraph ppcor]; };
-  DT = derive2 { name="DT"; version="0.2"; sha256="1g86p0jcjqi2ph5rhm45jkzibsa6yfcj8n5cg3giy90sqgjzkdx1"; depends=[htmltools htmlwidgets magrittr]; };
+  DT = derive2 { name="DT"; version="0.4"; sha256="06gsqz7p2fv6hc3fm3759gaa50krcfrqrmy7qbxyam6a36w9daix"; depends=[crosstalk htmltools htmlwidgets magrittr]; };
   DTComPair = derive2 { name="DTComPair"; version="1.0.3"; sha256="1af2293ckkpz0gjcibgzzvz37852cav4wa4girpc87yn3p4ajlri"; depends=[gee PropCIs]; };
   DTDA = derive2 { name="DTDA"; version="2.1-1"; sha256="0hi2qjcwd6zrzx87mdn1kns5f2h6jh7sz9jpgbi0p0i80xg8jnn3"; depends=[]; };
   DTK = derive2 { name="DTK"; version="3.5"; sha256="0nxcvx25by2nfi47samzpfrd65qpgvcgd5hnq9psx83gv502g55l"; depends=[]; };
@@ -783,6 +801,7 @@ in with self; {
   DTRlearn = derive2 { name="DTRlearn"; version="1.2"; sha256="1dakwlafs27nkjsiknnwxnb2hgc2xdpi5mb6dmzpjig7hg2f8d3f"; depends=[ggplot2 glmnet kernlab MASS]; };
   DTRreg = derive2 { name="DTRreg"; version="1.3"; sha256="1144kcqblyrpdqyj9as6y47iq3x99bf76hdw6j43cmgcs11gapc3"; depends=[]; };
   DVHmetrics = derive2 { name="DVHmetrics"; version="0.3.7"; sha256="1syxw49pzh36nfq0zfr83cwpac86fnj0b7nlqiin4jb00h8vrf6i"; depends=[ggplot2 KernSmooth markdown reshape2 shiny]; };
+  DWDLargeR = derive2 { name="DWDLargeR"; version="0.1-0"; sha256="1bxdvgj38xv2xj98njpyhy12b54nccwnc3v92kkpd3i7nwbw48dy"; depends=[Matrix SparseM]; };
   DWLasso = derive2 { name="DWLasso"; version="1.1"; sha256="1i8j8wjfvg69ldr8ahz1zv3m2wgxd701iph94ad22zs9qwqfg16z"; depends=[glmnet hglasso Matrix]; };
   DWreg = derive2 { name="DWreg"; version="2.0"; sha256="0bgahzgcxz86n0ady97l48zyahv3p2iyc2ivbij1xrfx3wcx3b5n"; depends=[DiscreteWeibull Ecdat maxLik survival]; };
   DYM = derive2 { name="DYM"; version="0.2"; sha256="1rk0xs224xi68f0mrygny2rklggl4grk866q7y9xck38bwy7aw94"; depends=[]; };
@@ -797,13 +816,14 @@ in with self; {
   DataClean = derive2 { name="DataClean"; version="1.0"; sha256="0wkafjyp6c2mx7g1bpz2pbxyl5nm2wba2hly8miizv0fdc762za5"; depends=[xlsx XML]; };
   DataCombine = derive2 { name="DataCombine"; version="0.2.21"; sha256="0iwb4726bk0cjhay694dp43b1553yyk9lpxbncs85kz229b26arm"; depends=[data_table dplyr]; };
   DataEntry = derive2 { name="DataEntry"; version="0.9-3"; sha256="0gfsg7wfwy88x7y1dwpgwi6fkizjnhrzj0a5ij70y4a4sjmyiy55"; depends=[digest gWidgets2 gWidgets2RGtk2 RGtk2]; };
-  DataExplorer = derive2 { name="DataExplorer"; version="0.4.0"; sha256="0yxx20wzdnsz924q7mh9sbbbby04vv5rybvyqbk2s78a8lqv7abw"; depends=[data_table ggplot2 gridExtra networkD3 reshape2 rmarkdown scales]; };
+  DataExplorer = derive2 { name="DataExplorer"; version="0.5.0"; sha256="1vsbnm720p786f627sfx447p8q45nwd2gdm7b9hf4d3rsmrcwqsf"; depends=[data_table ggplot2 gridExtra networkD3 reshape2 rmarkdown scales]; };
   DataGraph = derive2 { name="DataGraph"; version="1.0.1"; sha256="0rvysvkcs926jzhp7iz9d5np0pa31y825ajn9yyzhbdfk5dg2wry"; depends=[Rcpp]; };
   DataLoader = derive2 { name="DataLoader"; version="1.3"; sha256="18mih6mb95v5xjvmqwby2mma74fcxwyqdm5w8j3bhi4iwgfn6d7v"; depends=[plyr rChoiceDialogs readxl xlsx]; };
-  DatabionicSwarm = derive2 { name="DatabionicSwarm"; version="0.9.8"; sha256="1xvl3xppp16d8khazi9jnq9hfxjb7rj5vp7pgrg19lx1hnl0wack"; depends=[deldir GeneralizedUmatrix Rcpp RcppArmadillo]; };
+  DataVisualizations = derive2 { name="DataVisualizations"; version="0.9.2"; sha256="0np64vbk878i52gbh7gs1pklqy60zpa7n44ir7mxqyw3v50bvp8s"; depends=[AdaptGauss ggplot2 magrittr Rcpp RcppArmadillo]; };
+  DatabionicSwarm = derive2 { name="DatabionicSwarm"; version="1.0.0"; sha256="1xnqc0b3w8sqafbwmwd6pdm78p3ip1d3nfkp6jb081by49qjxiw6"; depends=[deldir GeneralizedUmatrix Rcpp RcppArmadillo]; };
   Datasmith = derive2 { name="Datasmith"; version="1.0-1"; sha256="1ba23b8a931pvml2dzw0zkm40akcl2lb6rps6bffrl7lvxiy35y1"; depends=[igraph lbfgs MASS Matrix nloptr truncnorm vegan]; };
   Davies = derive2 { name="Davies"; version="1.1-9"; sha256="19n2szki2dc8z01zh5a7bq4scgisnpd2qqbiimgrswjrykgh2fpm"; depends=[]; };
-  DeLorean = derive2 { name="DeLorean"; version="1.2.5"; sha256="17qrgij2npdgsdifsa2bvcs99p28why3wbdz5a8dkhyj4plj14kk"; depends=[broom coda dplyr fastICA functional ggplot2 kernlab MASS memoise Rcpp reshape2 rstan seriation stringr]; };
+  DeLorean = derive2 { name="DeLorean"; version="1.3.0"; sha256="0bsmrpraaks4nsjdbhn1npvybb29pxiby8sdimv36nqpb1fyjgpk"; depends=[broom coda dplyr fastICA functional ggplot2 kernlab MASS memoise Rcpp reshape2 rstan seriation stringr]; };
   DecorateR = derive2 { name="DecorateR"; version="0.1.1"; sha256="1dvyadlksqv8ns043yh91f6kw162k6r0zwn13j1g6pvismw04br9"; depends=[rJava RWeka RWekajars]; };
   Deducer = derive2 { name="Deducer"; version="0.7-9"; sha256="14kakyf28i654pndlswjzp6h3h7szpznrg6xznqg150mmn0bs3s6"; depends=[car e1071 effects foreign ggplot2 JGR MASS multcomp plyr rJava scales]; };
   DeducerExtras = derive2 { name="DeducerExtras"; version="1.7"; sha256="0sngsq31469a74y7nhskl82fwy2i0ga68m9g6b1xyhxz1a8kgvlg"; depends=[Deducer irr rJava]; };
@@ -822,8 +842,8 @@ in with self; {
   DensParcorr = derive2 { name="DensParcorr"; version="1.0"; sha256="15w0ifcq1js0wyjscfhlbga77sgzqpmz7zmwa77y92iwna8q66ad"; depends=[clime gplots]; };
   Density_T_HoldOut = derive2 { name="Density.T.HoldOut"; version="2.00"; sha256="0kh5nns1kqyiqqfsgvxhx774i2mf4gcim8fp5jjyq577x4679r31"; depends=[histogram]; };
   DepthProc = derive2 { name="DepthProc"; version="2.0.2"; sha256="0n9hs6fp047gnd8y87rzx5qcr3hqg3pdck97hcbzkd8jsi1b1daw"; depends=[colorspace geometry ggplot2 lattice MASS np Rcpp RcppArmadillo rrcov sm zoo]; };
-  Deriv = derive2 { name="Deriv"; version="3.8.3"; sha256="16yrd97vb7bb8dhnk3cw110jidzvp1xcwkyfd8ngg3zdw9b4d07n"; depends=[]; };
-  DescTools = derive2 { name="DescTools"; version="0.99.22"; sha256="0nl2zk0sp4fdilg6a5rgkidjg7xncy252ihbqpjia4bda8y23mkn"; depends=[BH boot expm foreign manipulate MASS mvtnorm Rcpp]; };
+  Deriv = derive2 { name="Deriv"; version="3.8.4"; sha256="1la2afxr9nilb32s3nc1j3spxzgcqn48aywq96pckpjk8vypsjyy"; depends=[]; };
+  DescTools = derive2 { name="DescTools"; version="0.99.23"; sha256="0y3br8s2kvvi552xv5ir2av810l8qknc06hw9x6bryjxj42ywa4i"; depends=[BH boot expm foreign manipulate MASS mvtnorm Rcpp]; };
   DescToolsAddIns = derive2 { name="DescToolsAddIns"; version="0.9.2"; sha256="1bznlg7p1b7n510rg5rji6qmmpdwgh4nazh1mps7r9rjhjp4w0qq"; depends=[DescTools rstudioapi]; };
   DescribeDisplay = derive2 { name="DescribeDisplay"; version="0.2.5"; sha256="02b6yjgklsdjh3rikc8f5wfx08ymbygr3fyq1c134xhffhykrlgp"; depends=[GGally ggplot2 plyr reshape2 scales]; };
   DescriptiveStats_OBeu = derive2 { name="DescriptiveStats.OBeu"; version="1.2.1"; sha256="0mb33ihqr8jj1ispykvyc7jn1wyaagb535ya5jgwlqrians41ihc"; depends=[jsonlite RCurl reshape]; };
@@ -839,7 +859,7 @@ in with self; {
   DiceEval = derive2 { name="DiceEval"; version="1.4"; sha256="06p3v161ig714k7z59iji64xhxw1a68kqhnlwhwpjpyrx7kn137b"; depends=[DiceKriging]; };
   DiceKriging = derive2 { name="DiceKriging"; version="1.5.5"; sha256="035kbk633v4kfb44wiyb556sayl73c24fc1w09r3f33shqgidzjm"; depends=[]; };
   DiceOptim = derive2 { name="DiceOptim"; version="2.0"; sha256="1hx4379yb6d36c494qc237vld4jnfxq18m994p5ii9ks6s7amifn"; depends=[DiceDesign DiceKriging mnormt pbivnorm randtoolbox rgenoud]; };
-  DiceView = derive2 { name="DiceView"; version="1.3-1"; sha256="0c7i1jy13d5bj822q1rp0d7gmmfjd00jaah34pnj8fzwyrq404z9"; depends=[DiceEval DiceKriging rgl]; };
+  DiceView = derive2 { name="DiceView"; version="1.3-2"; sha256="0ny9gbaycrq3lr4gqil1yyhkkyxmabl8w6cmkkzlx3yaara0idkf"; depends=[DiceEval DiceKriging rgl]; };
   DidacticBoost = derive2 { name="DidacticBoost"; version="0.1.1"; sha256="0z1h61n6nfjvb64fgkzi1sq7ag747crhh593hxkx0cpza29778rz"; depends=[rpart]; };
   Diderot = derive2 { name="Diderot"; version="0.12"; sha256="1cq8yk4r0csnslp286hzs04zzq44q0frz0kyll9jhqjil34qh0x7"; depends=[data_table doParallel foreach igraph RCurl splitstackshape stringi]; };
   DiffCorr = derive2 { name="DiffCorr"; version="0.4.1"; sha256="1kxp9dbiww086rmvmjvfhbk7jl36dkj88qwii6zg57llf7l5l4hm"; depends=[fdrtool igraph multtest pcaMethods]; };
@@ -849,11 +869,11 @@ in with self; {
   DiffusionRjgqd = derive2 { name="DiffusionRjgqd"; version="0.1.1"; sha256="1yb1jaq324qm2x8cl3bs2dflnsx8yfygpw2m3kk5hzaai9gfkqjf"; depends=[colorspace Rcpp RcppArmadillo rgl]; };
   Digiroo2 = derive2 { name="Digiroo2"; version="0.6"; sha256="1b1ahhqz5largjadlk5n6nw2183c05k28mksb1wm26y0lps0vdgr"; depends=[maptools spatstat spdep]; };
   DirectStandardisation = derive2 { name="DirectStandardisation"; version="1.2"; sha256="060nscnn7wamnbb45a55wr6rirlbpwwjz0kxiw3aiqkm16ilzfbs"; depends=[]; };
+  DirectedClustering = derive2 { name="DirectedClustering"; version="0.1.1"; sha256="1shdqz0c5bbgknvfqr3ais26cb5mpywnah3d3584w97sy8v7gxm2"; depends=[igraph]; };
   Directional = derive2 { name="Directional"; version="3.0"; sha256="08m6yg2jpz8fcdw4dlbpb1679d72q059ab2sgc3wj53m7vqirm4a"; depends=[doParallel foreach MASS RcppZiggurat Rfast]; };
   DirichletReg = derive2 { name="DirichletReg"; version="0.6-3"; sha256="0qvnsbyn3livp5jrnxskf5sf7f2svy5mqkmnhzncb9bwf3kxpyla"; depends=[Formula maxLik rgl]; };
-  DisHet = derive2 { name="DisHet"; version="0.2.0"; sha256="1n65vaiamji8c334nd1j11jc5xp3y7gvhs5j2vw8d71874v7w1da"; depends=[gtools matrixStats]; };
+  DisHet = derive2 { name="DisHet"; version="0.2.1"; sha256="1w0fpc73pk1fs05j328aw368qcabxfxz97zfqr5mda7wcmkwwnj3"; depends=[gtools matrixStats]; };
   Disake = derive2 { name="Disake"; version="1.5"; sha256="1fw45fmnir6h34jw8917mhyz6cgzbq4ywyyf51qxhm68wgzy9h17"; depends=[]; };
-  DiscML = derive2 { name="DiscML"; version="1.0.1"; sha256="0qkh0yak1kmzxxx0cqb47zgrj8v2s1d5danpibwwg43j138sb73l"; depends=[ape]; };
   DiscreteInverseWeibull = derive2 { name="DiscreteInverseWeibull"; version="1.0.2"; sha256="0vjsvl4m4zccfgizv7mzidbbpzqcm101x448vllcdcrn2xlnkmnq"; depends=[Rsolnp]; };
   DiscreteLaplace = derive2 { name="DiscreteLaplace"; version="1.1.1"; sha256="17w4vjvsm7jacvwckjczyah3hglq044r3m6vqdcrg8haz884rav2"; depends=[]; };
   DiscreteWeibull = derive2 { name="DiscreteWeibull"; version="1.1"; sha256="1rg3ax6jryagf5d3h8m44x9wyhr2qff3srfa9zrk6i64p1ahk9lr"; depends=[Rsolnp]; };
@@ -874,7 +894,7 @@ in with self; {
   DoTC = derive2 { name="DoTC"; version="0.2"; sha256="1hjjkmxrbiysy3xl6n4q7kxcygdq68jcsgki1p937zj9a17sa62j"; depends=[ggplot2 plyr]; };
   Dodge = derive2 { name="Dodge"; version="0.8"; sha256="1vnvqb2qvl6c13s48pyfn1g6yfhc60ql3vn7yh2zymxcsr1gxgcw"; depends=[]; };
   Dominance = derive2 { name="Dominance"; version="1.0.17"; sha256="07xsyadmq47szvp1vnf53ijq43pwd9g7554fgl803fhkwq6b3jgh"; depends=[chron gdata igraph XLConnect]; };
-  DoseFinding = derive2 { name="DoseFinding"; version="0.9-15"; sha256="0sc3z62jn2jh6kjacqpf9vnpv0wzihcln24m5ipspmz0n1b0nvz7"; depends=[lattice mvtnorm]; };
+  DoseFinding = derive2 { name="DoseFinding"; version="0.9-16"; sha256="0ncr95lf4mifmx6n2qkg8m3cn326zj9w4hr7afsdxg155l11w89z"; depends=[lattice mvtnorm]; };
   DoubleCone = derive2 { name="DoubleCone"; version="1.1"; sha256="1kbvsj93nn2306s6pgqiiznmlcn2nqsgcxinihl613ivczxhzpqg"; depends=[coneproj MASS Matrix]; };
   DoubleExpSeq = derive2 { name="DoubleExpSeq"; version="1.1"; sha256="00xpj5xmpgmvp6h76imkmghrnlfk6c50ydvv0jram6m6ix3z8323"; depends=[numDeriv]; };
   Dowd = derive2 { name="Dowd"; version="0.12"; sha256="1fgaq22n7gm8pqxdfkiayqgjfqjn7knjjjr1x12jgv77cv08xyjk"; depends=[bootstrap forecast MASS]; };
@@ -886,11 +906,12 @@ in with self; {
   DstarM = derive2 { name="DstarM"; version="0.2.2"; sha256="014xlj5kipl2jpcgcqs1ynw05x17wbsgc5mhfjn3p96bbp6pkzzy"; depends=[DEoptim ggplot2 rtdists RWiener]; };
   DunnettTests = derive2 { name="DunnettTests"; version="2.0"; sha256="1sf0bdxays10n8jh2qy85fv7p593x58d4pas9dwlvvah0bddhggg"; depends=[mvtnorm]; };
   DySeq = derive2 { name="DySeq"; version="0.22"; sha256="1sx6mg0bcqb5ff6x305k43zx3fwd16rvxc7xb3ai5h3w7fs9zz7y"; depends=[boot MASS TraMineR]; };
+  Dykstra = derive2 { name="Dykstra"; version="1.0-0"; sha256="1rc1409ky0ysqr3ccq28yhbs94m6d0z2dfa66k4c7irxjvbagwz6"; depends=[]; };
   DynClust = derive2 { name="DynClust"; version="3.13"; sha256="020zl2yljp47r03rcbzrbdmwk482xx27awwzv4kdrbchbzwhxqgm"; depends=[]; };
   DynNom = derive2 { name="DynNom"; version="4.1.1"; sha256="1c4hykp8fwr6h5y09m4qs23bmbaj6im2c833mv2ymlhy5bwhmnfi"; depends=[BBmisc compare ggplot2 plotly rms shiny stargazer survival]; };
-  DynTxRegime = derive2 { name="DynTxRegime"; version="3.01"; sha256="0kcg4yqh1srhcn4wp0k97ppwn6w8vh05y9ssn82sjhlgxfbhzzjx"; depends=[dfoptim kernlab modelObj rgenoud]; };
+  DynTxRegime = derive2 { name="DynTxRegime"; version="3.2"; sha256="0a6s28vc7kf6r7qmy9xjmxm39fl0ijnbl01d8rzr4w9sbnr3n85l"; depends=[dfoptim kernlab modelObj rgenoud]; };
   DynamicDistribution = derive2 { name="DynamicDistribution"; version="1.1"; sha256="1s78hpj2pxjs4vixin1i816qjbn3wk7b8rd2zdjp4d4rbxifcqf5"; depends=[]; };
-  EAinference = derive2 { name="EAinference"; version="0.2.2"; sha256="0lff44j2n63r6dnrxh5niaw380bbww41l89fajmkpcimxhpwqkk1"; depends=[hdi limSolve MASS msm mvtnorm Rcpp RcppArmadillo]; };
+  EAinference = derive2 { name="EAinference"; version="0.2.3"; sha256="1kzcfya3z6rf1vqjn72yjymdhrn4dzgmwifh3w6k22cy5jxffzn4"; depends=[hdi limSolve MASS msm mvtnorm Rcpp RcppArmadillo]; };
   EBASS = derive2 { name="EBASS"; version="0.1"; sha256="14hxzj06wrc4ihflr7dqk28fsjwbcizr0jy54vhv0mk1y1gd4201"; depends=[]; };
   EBEN = derive2 { name="EBEN"; version="4.6"; sha256="0gcf5b2viiq69vs8bd8nhk65g9sbzgg212w7zpnz4y6cv9jkk5zz"; depends=[]; };
   EBMAforecast = derive2 { name="EBMAforecast"; version="0.52"; sha256="1809ia0dpkilprv7x19drp1v2qckk0wm596f1i1vl0k37wbhcziv"; depends=[abind Hmisc plyr Rcpp separationplot]; };
@@ -898,14 +919,17 @@ in with self; {
   EBglmnet = derive2 { name="EBglmnet"; version="4.1"; sha256="0wlscmimj74alcr8k5h1g3alvlpss4g2ah7zkpd42akam3zb4s5z"; depends=[]; };
   EBrank = derive2 { name="EBrank"; version="1.0.0"; sha256="1qzhrr3n2zv31mjp224b35324nr9nigzazyfv11j4zhwl1ipf632"; depends=[]; };
   ECFsup = derive2 { name="ECFsup"; version="0.1-2"; sha256="0fpcab0gjgsc3sx0plpx068rw3a7kfzs2nyrr477a5m0rcbqf1kh"; depends=[foreach Rcpp RcppArmadillo]; };
-  ECOSolveR = derive2 { name="ECOSolveR"; version="0.3-2"; sha256="1awkylhsd0l5k2iflcx5y2779zhxjzr8l0xrk7v24m4nak6xj1jg"; depends=[Matrix]; };
+  ECOSolveR = derive2 { name="ECOSolveR"; version="0.4"; sha256="14dpja9wr1qqip388c8b6xvdvdpwwmyq5piv182ir0rwrla5nzdb"; depends=[Matrix]; };
   ECctmc = derive2 { name="ECctmc"; version="0.2.4"; sha256="1aw0cbfgzlrkyc3m1rfhbdcdyb8wjcfx6p2mz1hvds86mf1pzv1i"; depends=[Rcpp RcppArmadillo]; };
-  ECharts2Shiny = derive2 { name="ECharts2Shiny"; version="0.2.12"; sha256="0g0591dddkdvpq1wgw5wjz0b0qlwkjxi0zz9g33qs442ijq8v1wc"; depends=[jsonlite shiny]; };
+  ECharts2Shiny = derive2 { name="ECharts2Shiny"; version="0.2.13"; sha256="0dq8ja4ydxnc7qx35qhh9ryqgi7ambwz6ka2821mmq3p994crswn"; depends=[jsonlite shiny]; };
+  ECoL = derive2 { name="ECoL"; version="0.1.0"; sha256="0rizs41fk4w3lwrc4xw8hl035pvg0y746w1zy3bs8ch0hqyplhdm"; depends=[cluster e1071 igraph MASS]; };
+  EDA = derive2 { name="EDA"; version="1.0.1"; sha256="13qyi7yh1xqsyyvd51j5dl6dx4xh6kr97pz5v4wn46nbx6vna0dk"; depends=[ggplot2]; };
   EDFIR = derive2 { name="EDFIR"; version="1.0"; sha256="0nv1badyg1dri6z91fvs68a72g22vdg0rpi3fkpxw527r11fvrrv"; depends=[geometry lpSolve MASS vertexenum]; };
   EDISON = derive2 { name="EDISON"; version="1.1.1"; sha256="12cc13ng5fc4nm0nvqxqplpb2ycz4cln73xqkk85dka2fnpykjc7"; depends=[corpcor MASS]; };
+  EDMeasure = derive2 { name="EDMeasure"; version="1.1.0"; sha256="1q9k0wp3wi7sqgcn3j74r8q525q0kbcx4nlm8i0frzpb75yak7ab"; depends=[dHSIC energy rBayesianOptimization]; };
   EDR = derive2 { name="EDR"; version="0.6-6"; sha256="10m92p3fy5z2kca4h9awwmvs4pqri92habkvgjvjl5ira09yvyi7"; depends=[sm]; };
   EEM = derive2 { name="EEM"; version="1.1.1"; sha256="0w20kakgcpyhfi7fcrss4w67pbaj87hi2scy7g05q3sg2ygac7gj"; depends=[colorRamps ggplot2 R_utils reshape2 sp]; };
-  EFAutilities = derive2 { name="EFAutilities"; version="1.1.1"; sha256="028nx0a80vfs054afkjfvs9ql7l7fw64b014xgqy0jn0z83s4yj5"; depends=[GPArotation mvtnorm plyr]; };
+  EFAutilities = derive2 { name="EFAutilities"; version="1.2.1"; sha256="1hgmj9zk9mwqwmqila1ana6jzqg55aj535pkrzai2y6yq45dvfh9"; depends=[GPArotation mvtnorm plyr]; };
   EFDR = derive2 { name="EFDR"; version="0.1.1"; sha256="0jgznwrd40g9xmvhrd7b441g79x41ppfdn6vbsbzc0k5ym1wzb1p"; depends=[doParallel dplyr foreach gstat Matrix sp tidyr waveslim]; };
   EFS = derive2 { name="EFS"; version="1.0.3"; sha256="1q8cf8dnxpv5s3lr9145y0wjhak4rz18dzah4xfs5qr4c8nlpl54"; depends=[party pROC randomForest ROCR]; };
   EGRET = derive2 { name="EGRET"; version="2.6.0"; sha256="0alr47pmq1ml64j500vkqwmvrqa3i1ccbf3w7w44fbbjy1vfp04a"; depends=[dataRetrieval fields lubridate survival truncnorm]; };
@@ -923,18 +947,17 @@ in with self; {
   EMA = derive2 { name="EMA"; version="1.4.5"; sha256="16iq5a3yrilchqmkyb4g5bmmgpw6psm88n52gmlax75xbiwk8261"; depends=[affy AnnotationDbi Biobase biomaRt cluster FactoMineR gcrma GSA heatmap_plus MASS multtest siggenes survival xtable]; };
   EMAtools = derive2 { name="EMAtools"; version="0.1.3"; sha256="1kzna29kd6s2hgli5azrfz85mbyl1x6knvhhhny2scf7a1fcijsy"; depends=[DataCombine ggplot2 lmerTest sjstats]; };
   EMC = derive2 { name="EMC"; version="1.3"; sha256="0sdpxf229z3j67mr9s7z4adzvvphgvynna09xkkpdj21mpml23p6"; depends=[MASS mvtnorm]; };
-  EMCluster = derive2 { name="EMCluster"; version="0.2-8"; sha256="15ngm8k0iscasi1jcn4ffya0y4rq5llj5m7gjv8f61rw31yfyjm0"; depends=[MASS Matrix]; };
+  EMCluster = derive2 { name="EMCluster"; version="0.2-10"; sha256="1p8zy0f10383svgm2di0gmqwmn4m8ydsn16xh5rymssg831xwql6"; depends=[MASS Matrix]; };
   EMD = derive2 { name="EMD"; version="1.5.7"; sha256="0m2g7akg9h964d6qr1mj20h9pcb2fcmala3skhl0qpy8qz01w5ck"; depends=[fields locfit]; };
   EML = derive2 { name="EML"; version="1.0.3"; sha256="04qz4rwq0amy9lp6358qjjql46ky2slqrvipngym5klqvm9vi0zi"; depends=[uuid xml2]; };
   EMMAgeo = derive2 { name="EMMAgeo"; version="0.9.4"; sha256="1i36s8mzp04alff6lqkc798xjzgn61wdpl5i0awjdvg26ka8v7lj"; depends=[GPArotation limSolve shape shiny]; };
-  EMMIXcontrasts2 = derive2 { name="EMMIXcontrasts2"; version="0.1.2"; sha256="016vy4cgi8zyzjalp3wi1z49363xddy95iivlqdmb3lcgfl3i7iq"; depends=[]; };
-  EMMIXcskew = derive2 { name="EMMIXcskew"; version="0.9-4"; sha256="0gzy3nrqw880p4sr08qfbyyjqgq08brfm9pk7xkibdnvlrl6mld2"; depends=[MASS mnormt rgl]; };
-  EMMIXskew = derive2 { name="EMMIXskew"; version="1.0.2"; sha256="1avg6q3z77786wx6gpcn53sv5lhj3d6597kp885i418k4hyh72qv"; depends=[KernSmooth lattice mvtnorm]; };
+  EMMIXcskew = derive2 { name="EMMIXcskew"; version="0.9-5"; sha256="1ys5kvns6jlw2lk9m6xcy71wx1d581cmphiaxnp3hsqimc8wz7hq"; depends=[MASS mnormt rgl]; };
+  EMMIXskew = derive2 { name="EMMIXskew"; version="1.0.3"; sha256="05y1ivbzbsfab90925l3ahzd3b8y5kjfk3f0p2s9s3sfyxphqah7"; depends=[KernSmooth lattice mvtnorm]; };
   EMMIXuskew = derive2 { name="EMMIXuskew"; version="0.11-6"; sha256="0japf0l0sj84jna7b5kirp6pgqa4c923ldwphb16ch2xxrgk5n5k"; depends=[MASS]; };
   EMMLi = derive2 { name="EMMLi"; version="0.0.3"; sha256="1b36kyzvrdljmkysggv8jyaip78pj32ms0xhj2y568hd419lkh2p"; depends=[]; };
   EMMREML = derive2 { name="EMMREML"; version="3.1"; sha256="0qwj4jlfhppjxwcjldh49b6idnagazrxybaid3k2c269wvxwvddq"; depends=[Matrix]; };
   EMP = derive2 { name="EMP"; version="2.0.2"; sha256="0l9wyxmcl8b6jiykc4mim6npmz5wrsapk2wgxbfhg27dwdb847ha"; depends=[ROCR]; };
-  EMSC = derive2 { name="EMSC"; version="0.8.2"; sha256="1wclkyq528fhvbr6n5592byjlpi0xszhqzbbzsq64ilg88q9cmaj"; depends=[pracma]; };
+  EMSC = derive2 { name="EMSC"; version="0.9.0"; sha256="13d915g7iyv724x35i9mr8msy5mhrpqhhva21vdinxbjdy6vdlr9"; depends=[pracma]; };
   EMSaov = derive2 { name="EMSaov"; version="2.2"; sha256="12y0mj72la4ciwzgr38w9ssik4hixjf5kjsjwrvz6z59hi0ldfly"; depends=[shiny]; };
   EMT = derive2 { name="EMT"; version="1.1"; sha256="0m3av1x3jcp3hxnzrfb128kch9gy2zlr6wpy96c5c8kgbngndmph"; depends=[]; };
   EMVC = derive2 { name="EMVC"; version="0.3"; sha256="1n7fxmqg8762lc7lg50h6wcrxrrz4nvi0xdaganz84l8vp8w90ms"; depends=[]; };
@@ -942,7 +965,6 @@ in with self; {
   ENMeval = derive2 { name="ENMeval"; version="0.2.2"; sha256="1w8mjcmxxkx8lxxzzbjpv1i7cm6l8hhml7ynp80s9yiprr04bq9c"; depends=[dismo doParallel foreach raster rJava]; };
   ENiRG = derive2 { name="ENiRG"; version="1.0.1"; sha256="0yjy7g0pia4g18h7mawkxn77dnnqcajnbml21rrv63qwlr347355"; depends=[ade4 fgui gdata miniGUI raster rgrass7 sp]; };
   ENmisc = derive2 { name="ENmisc"; version="1.2-7"; sha256="07rix4nbwx3a4p2fif4wxbm0nh0qr7wbs7nfx2fblafxfzhh6jc7"; depends=[Hmisc RColorBrewer vcd]; };
-  EPGLM = derive2 { name="EPGLM"; version="1.1.2"; sha256="1x7n16pjr38gh5llraszjwgm650zmcm14j6v1kc5k81g4ghgdsq6"; depends=[BH MASS Rcpp RcppArmadillo]; };
   EQL = derive2 { name="EQL"; version="1.0-0"; sha256="0lxfiizkvsfls1km1zr9v980191af6qjrxwcqsa2n6ygzcb17dp5"; depends=[lattice ttutils]; };
   EQUIVNONINF = derive2 { name="EQUIVNONINF"; version="1.0"; sha256="103wrry0cmikprihmgx8y4kk1pnbjis7rs1xw13w14v902xkr2rq"; depends=[BiasedUrn]; };
   ERP = derive2 { name="ERP"; version="1.1"; sha256="00w9zz5rp1asvk13sj9gkd14n2akbclsyz26jp5a3r85fh6chdm0"; depends=[fdrtool mnormt]; };
@@ -951,11 +973,11 @@ in with self; {
   ESG = derive2 { name="ESG"; version="0.1"; sha256="1jw6239asv6lwxrz5v0r5pzg6v500bqxg8361sh4jj67rsrc7g9m"; depends=[]; };
   ESGtoolkit = derive2 { name="ESGtoolkit"; version="0.1"; sha256="0r09arhsvamdyahini5yhgc43msdxwvn45l57xbfszahsnr3b3aq"; depends=[CDVine ggplot2 gridExtra Rcpp reshape2 ycinterextra]; };
   ESKNN = derive2 { name="ESKNN"; version="1.0"; sha256="1w43v3q9i7dkx1qwcl5cgh9wdgg5r4s7vfbkk0vcsq9qd8nbcvfy"; depends=[caret]; };
-  ESTER = derive2 { name="ESTER"; version="0.1.0"; sha256="0smrrjnd64g3yvb782h6q4j1p0cirpb31qnmmychdb499wjmd05l"; depends=[dplyr ggplot2 lme4 magrittr rlang]; };
+  ESTER = derive2 { name="ESTER"; version="0.2.0"; sha256="1jiyqq5hgqc754r434sik9jnlpw66xz56cjdf5ig95qkffzsg224"; depends=[brms cowplot doParallel dplyr foreach ggplot2 lme4 magrittr rlang tidyr]; };
   ETAS = derive2 { name="ETAS"; version="0.4.3"; sha256="08i8i3az5f4nb6cwfyilc0dk84j6i3f3k6bxr2k1lrds1rqx0fla"; depends=[fields lattice maps Rcpp spatstat]; };
   ETC = derive2 { name="ETC"; version="1.3"; sha256="1nvb9n0my7h1kq996mk91canxi6vxy3mzhrshrvm13ixvl48lkkh"; depends=[mvtnorm]; };
-  ETLUtils = derive2 { name="ETLUtils"; version="1.3"; sha256="13xq9i9fr34kx1nym7nr02gynshzm4jjn4qzx6ydg044b7xl57jp"; depends=[bit ff]; };
-  EValue = derive2 { name="EValue"; version="1.0.0"; sha256="0n0k6mia3nncsjchlnv5a0n4kcbnflngdxdnr1l8ar9bri0xwacg"; depends=[ggplot2 metafor]; };
+  ETLUtils = derive2 { name="ETLUtils"; version="1.4.1"; sha256="07wqrg7mnxmbdf2ibxj5kppl4sd3l608yfhbbsngkhpsrm203qva"; depends=[bit ff]; };
+  EValue = derive2 { name="EValue"; version="1.1.1"; sha256="0fdihngqgl2m7385ih08zzh9y38aal1d9lv7358qf0z68i9bgfa2"; depends=[ggplot2 metafor]; };
   EW = derive2 { name="EW"; version="1.1"; sha256="0wc3v9qisiikvlp28xhlgsxb92fhkm6vslia6d0vpihyai0p1h1g"; depends=[]; };
   EWGoF = derive2 { name="EWGoF"; version="2.2.1"; sha256="0n1fx6k9ndb2s9ybzizbqz662c9s1f48q6v697pqhnfy9si1nplz"; depends=[Rcpp]; };
   EXRQ = derive2 { name="EXRQ"; version="1.0"; sha256="1iqsr52sl2j5q03122a7rsp6n6a2bkysk2r908c89l36gk4sj2i5"; depends=[mnormt quantreg]; };
@@ -968,7 +990,7 @@ in with self; {
   EbayesThresh = derive2 { name="EbayesThresh"; version="1.4-12"; sha256="07a2dd3za2dc81n6m2xy794sclp3yw7f46lg1igaflh7m9407198"; depends=[wavethresh]; };
   Ecdat = derive2 { name="Ecdat"; version="0.3-1"; sha256="1lvfp2ih8ng3kn3cia687j5fd27iwiak7gk3bhgjp8bnlgblqq02"; depends=[Ecfun]; };
   Ecfun = derive2 { name="Ecfun"; version="0.1-7"; sha256="0s4hhvwyi411xr7c1fv098nmwqjcyvh8vy65j5w9hd80l864lvkl"; depends=[fda gdata jpeg MASS RCurl stringi TeachingDemos tis XML]; };
-  EcoGenetics = derive2 { name="EcoGenetics"; version="1.2.1-2"; sha256="0cv513nxz774lmas90calch22d544jsw97xhng45s3g9f85094av"; depends=[d3heatmap edgebundleR ggplot2 htmlwidgets igraph jsonlite magrittr networkD3 party pheatmap plotly raster reshape2 rgdal rkt SoDA sp]; };
+  EcoGenetics = derive2 { name="EcoGenetics"; version="1.2.1-4"; sha256="18l5v7zsmz35brnf6b8qfxbs8906rmyc2kkh9bm96x01m3vx8pkh"; depends=[d3heatmap edgebundleR ggplot2 htmlwidgets igraph jsonlite magrittr networkD3 party pheatmap plotly raster reshape2 rgdal rkt SoDA sp]; };
   EcoHydRology = derive2 { name="EcoHydRology"; version="0.4.12"; sha256="03dzdw79s0cnnd7mv6wfxw374yf66dlcmj10xh6sh5i352697xp1"; depends=[DEoptim operators topmodel XML]; };
   EcoIndR = derive2 { name="EcoIndR"; version="1.2"; sha256="1p2m4kramcf71xlm9hbk5l5mb8nmjfac1p3csai7m2gmikf559yj"; depends=[]; };
   EcoSimR = derive2 { name="EcoSimR"; version="0.1.0"; sha256="13ni3vdfahqjyb9xrv7fmnbj5m5n3jwfh1bl9r0bvhi5w72kb7rj"; depends=[MASS]; };
@@ -989,8 +1011,8 @@ in with self; {
   EloChoice = derive2 { name="EloChoice"; version="0.29"; sha256="1r54laim7i8hzgyir47xq7qw8hxzsdw1ss10sljq1rm2lpsci6wk"; depends=[Rcpp RcppArmadillo]; };
   EloRating = derive2 { name="EloRating"; version="0.43"; sha256="0gzpi4qjiqn0lzjwy37pkz6fg7dkp2hv2dfqgzfk32wsj0bswgab"; depends=[zoo]; };
   ElstonStewart = derive2 { name="ElstonStewart"; version="1.1"; sha256="1y2g4x3fhi78c2406bk8r8c3x9zhx8ya3qlbnypdm65j0minixsn"; depends=[digest kinship2]; };
-  Emcdf = derive2 { name="Emcdf"; version="0.1.1"; sha256="0lflaynipdpd14xpi7db5w7a92z53vjyjhp8whv6yynl13kxrcwv"; depends=[lattice Rcpp]; };
-  EmiStatR = derive2 { name="EmiStatR"; version="1.2.0"; sha256="0g1bs8018vxgnwb578iz5nin13khk7wjj0in47y250j2kcz5nvgn"; depends=[doParallel foreach lattice shiny]; };
+  Emcdf = derive2 { name="Emcdf"; version="0.1.2"; sha256="0jb59jp1drcwipmk6yzg0cl366i8nhffa13c3x3fmhaj7ifv77vv"; depends=[lattice Rcpp]; };
+  EmiStatR = derive2 { name="EmiStatR"; version="1.2.0.6"; sha256="1ygi3rz4xc7y0m1jd23g3li62br7fs0dcm6fj8kha5q93xn6yvrx"; depends=[doParallel foreach lattice shiny xts zoo]; };
   EmpiricalCalibration = derive2 { name="EmpiricalCalibration"; version="1.3.6"; sha256="0fiwvdzcyz6ayzqfa6j2ygpab1cwbi04gd2c2g1j9qbdq95myipa"; depends=[ggplot2 gridExtra]; };
   EnQuireR = derive2 { name="EnQuireR"; version="0.10"; sha256="00kyclcr8da79lwpqa1vzkwn6pgf197h2biackwgphb0byhi8ssx"; depends=[FactoMineR MASS Rcmdr SensoMineR]; };
   EnergyOnlineCPM = derive2 { name="EnergyOnlineCPM"; version="1.0"; sha256="1a3wvclqdwcvq5inhliwjnd7xzqbjvzs8h8ncy6qlhjq6s5n7nm8"; depends=[energy MASS]; };
@@ -1002,19 +1024,21 @@ in with self; {
   EnsemblePenReg = derive2 { name="EnsemblePenReg"; version="0.7"; sha256="00218yh0vzlb5g94asq5nz4i8blppskdzz9fl4c0v3fld3kxz2md"; depends=[EnsembleBase glmnet]; };
   EntropyEstimation = derive2 { name="EntropyEstimation"; version="1.2"; sha256="13kb83lfpkw6yq687j0ci23yn5c9dqjibybyyaplk6jixy08lrvy"; depends=[]; };
   EntropyExplorer = derive2 { name="EntropyExplorer"; version="1.1"; sha256="02ljnq9ayxg4lrrnb6nlxr1k5ki8dd5i8hjb9fvvb19hwr2id5h4"; depends=[]; };
-  EnvCpt = derive2 { name="EnvCpt"; version="0.1.1"; sha256="052yz26lypcffwnxdqxm2d029rzcdkw5dvf2xyvyhi5lcnxjrn9r"; depends=[changepoint forecast MASS zoo]; };
+  EnvCpt = derive2 { name="EnvCpt"; version="1.0"; sha256="0rdcxb924ij3rdcnzfz8pxahvwza2qi2siqpxsafjkg2mrqil9kj"; depends=[changepoint forecast MASS zoo]; };
   EnvNicheR = derive2 { name="EnvNicheR"; version="1.4"; sha256="0hxx9wmzlw0clvdgdsy8msc78nvm81j3naxr57i7lqqa360sjy3a"; depends=[IDPmisc]; };
   EnvStats = derive2 { name="EnvStats"; version="2.3.0"; sha256="0f0sda26in2a25vq8xr6pkskjk10q2pg463h9c1xap3bghq4xgc3"; depends=[ggplot2 MASS nortest]; };
   EnviroPRA = derive2 { name="EnviroPRA"; version="1.0"; sha256="0yirh3vy7wap0qmm3kvjz9y68gcvp9i8qshv80wh8aijxwklpr8n"; depends=[fitdistrplus kSamples MASS truncdist]; };
   EnviroStat = derive2 { name="EnviroStat"; version="0.4-2"; sha256="0ckax6vkx0vwczn21nm1dr8skvpm59xs3dgsa5bs54a3xhn5z9hs"; depends=[MASS]; };
-  Epi = derive2 { name="Epi"; version="2.19"; sha256="1zd5q5w8l9gvq0x5j00vwfb61kfadbziqmff5fm0cmwnvpizl55k"; depends=[cmprsk data_table etm MASS Matrix numDeriv plyr survival zoo]; };
+  Epi = derive2 { name="Epi"; version="2.24"; sha256="0vrcp7i5mhxfx1401zpzjbkbbyqd873mzjcvfz0bwcxrk4a5gld7"; depends=[cmprsk data_table etm MASS Matrix numDeriv plyr survival zoo]; };
   EpiBayes = derive2 { name="EpiBayes"; version="0.1.2"; sha256="1qfir0dl085c9ib1acsygmj7gihc4ar98k5niqdsgnmji88h17y2"; depends=[coda epiR scales shape]; };
   EpiContactTrace = derive2 { name="EpiContactTrace"; version="0.12.0"; sha256="1i84fslz8sdngvkv34zhzjwzrzzxx6f4s31p8f5smmf028jlpyys"; depends=[]; };
   EpiCurve = derive2 { name="EpiCurve"; version="2.0-1"; sha256="15y6nlinw3ppi4bn8xpsrch1avn7642f06lcsv2bjyi1carhfqkw"; depends=[dplyr ggplot2 ISOweek RColorBrewer scales timeDate]; };
   EpiDynamics = derive2 { name="EpiDynamics"; version="0.3.0"; sha256="0hpysjl8wfgylbp4ddxmi5msvlp1w70c6pxggc2bwdgap3s127f3"; depends=[deSolve ggplot2 reshape2]; };
   EpiEstim = derive2 { name="EpiEstim"; version="1.1-2"; sha256="0r56iglhkrqvlsf3gbahd544h944fmbyn6jdc113rhjscf6dl605"; depends=[]; };
-  EpiILM = derive2 { name="EpiILM"; version="1.2"; sha256="1mp6j1yk9vzs88clkpwgk0qlbc5b4m94j3isgirsq346006q5jil"; depends=[]; };
-  EpiModel = derive2 { name="EpiModel"; version="1.5.0"; sha256="0bmd98dk7gh9x4kdgrdksj88216vxgwmgnk3vfv9caj8b91af9j4"; depends=[ape deSolve doParallel ergm foreach lazyeval network networkDynamic RColorBrewer tergm]; };
+  EpiILM = derive2 { name="EpiILM"; version="1.4.1"; sha256="01cp02c6ylx17cwvzs22zh7p18ggyqzrky5393xbjxqlwraf970n"; depends=[coda]; };
+  EpiILMCT = derive2 { name="EpiILMCT"; version="1.0"; sha256="1s7f4g1d44mqp475z5cn97dqv6b1caxmfq1p6gr1w7jvgq0dfqp5"; depends=[]; };
+  EpiModel = derive2 { name="EpiModel"; version="1.6.1"; sha256="0jmwrpcfrfwrw5zwvwl0cv961nvqfvxjggx93iyc8z8bd6mf1wba"; depends=[ape deSolve doParallel ergm foreach ggplot2 lazyeval network networkDynamic RColorBrewer tergm]; };
+  EpiStats = derive2 { name="EpiStats"; version="1.0"; sha256="17i8i3v8qpwas4h6g8sbdl42syg20fm22c7p1bnv4nzx28p9yzhy"; depends=[dplyr epiR]; };
   EpiWeek = derive2 { name="EpiWeek"; version="1.1"; sha256="19bvjiiz8qn9nlvf3nq238qi1hszlm6asrc03p8ykp6gpl2pi6js"; depends=[]; };
   EpistemicGameTheory = derive2 { name="EpistemicGameTheory"; version="0.1.2"; sha256="0b2gnrvhlsw85qv63ib32pj55l7w63wgvbrj5rb209g6h46fby8m"; depends=[lpSolve]; };
   Eplot = derive2 { name="Eplot"; version="1.0"; sha256="1glmkjjj432z9g4gi56pgvfrm5w86iplirnd5hm4s99qci2hgc64"; depends=[]; };
@@ -1039,21 +1063,19 @@ in with self; {
   ExceedanceTools = derive2 { name="ExceedanceTools"; version="1.2.2"; sha256="084sc6pggfbcyavhfnd5whyigw7dyjhb4cxmxi0kh2jiam5k8v5b"; depends=[SpatialTools splancs]; };
   ExcessMass = derive2 { name="ExcessMass"; version="1.0"; sha256="1z8l1lja02wxw8l72s3bq6sgjymn5929n123xk6b7ndd52zlfgf5"; depends=[]; };
   ExomeDepth = derive2 { name="ExomeDepth"; version="1.1.10"; sha256="11lg1n9wls96cg1byj5bfircw4bsf0rbk37h8fl0hkh29m6gyy16"; depends=[aod Biostrings GenomicAlignments GenomicRanges IRanges Rsamtools VGAM]; };
-  ExpDE = derive2 { name="ExpDE"; version="0.1.2"; sha256="0q95d5gklg834f02b2p252jb3kbbjr4sj3wdak9ljibscnnlckml"; depends=[]; };
+  ExpDE = derive2 { name="ExpDE"; version="0.1.4"; sha256="0yjsap92dd1sb23fhw69i0ddk3lyj5f4kwp9rvz4k0vxry10hx7g"; depends=[assertthat]; };
   ExpDes = derive2 { name="ExpDes"; version="1.1.2"; sha256="0qfigbx06b3p04x5v7wban139mp8hg8x77x6nzwa4v6dr226qbkv"; depends=[]; };
   ExpDes_pt = derive2 { name="ExpDes.pt"; version="1.1.2"; sha256="0khw2jhg2vxcivgr20ybvrsqhd8l8bir5xjmr4m44za9nhap43bz"; depends=[]; };
   ExpRep = derive2 { name="ExpRep"; version="1.0"; sha256="0spv3wd9c8sr338n5kdzrs28yh7s90fl70wsdnkibmlxhnh3ay3g"; depends=[]; };
-  ExplainPrediction = derive2 { name="ExplainPrediction"; version="1.2.3"; sha256="11gc7nabz3776igj6z0mwyqqmislsxxq3ag4rfjk3k7xvkb9g6jy"; depends=[CORElearn semiArtificial]; };
-  ExtDist = derive2 { name="ExtDist"; version="0.6-3"; sha256="1vsxm578bb70wnz3mxm7y1n5vs0x5pby99hvxg5y5ksh2g2ascwa"; depends=[numDeriv optimx]; };
-  ExtremeBounds = derive2 { name="ExtremeBounds"; version="0.1.5.2"; sha256="010k2ddrrmrv4ayr009sm0vdgql5n1hy2b7rxyggj8iqsm8lkxim"; depends=[Formula]; };
+  ExplainPrediction = derive2 { name="ExplainPrediction"; version="1.3.0"; sha256="14m3b9fsrpfpr8avsnhl8b3bzk2xlhwgkwag5iq8bj7bzvv4yck1"; depends=[CORElearn semiArtificial]; };
+  ExtremeBounds = derive2 { name="ExtremeBounds"; version="0.1.6"; sha256="12bc4mmkmggvk3kfmz6nq13fa2470z0bx8smnvq9vf1ypdiiw85y"; depends=[Formula]; };
   FACTMLE = derive2 { name="FACTMLE"; version="1.1"; sha256="0qz2i0hnn84bpps1h8jmfkgp5p59axr0wayj9dvl839radrvpqvy"; depends=[rARPACK]; };
   FACTscorer = derive2 { name="FACTscorer"; version="0.1.0"; sha256="1gbfpm5szi6w8iyp7ywpqrmdq0wrv5axj29sj9gxjwmjfh5qgqjx"; depends=[]; };
-  FADA = derive2 { name="FADA"; version="1.3.2"; sha256="0093j4sgm1fv9bz9h9ldgaac0ggxwwk2qk46c7vxfh9zkmlm6zmb"; depends=[corpcor crossval elasticnet glmnet MASS matrixStats mnormt sda sparseLDA]; };
+  FADA = derive2 { name="FADA"; version="1.3.3"; sha256="1kckksim3m6kypm3qnyijgmnrq6dwjfs5jax5dr94giwlpfcdl8q"; depends=[corpcor crossval elasticnet glmnet MASS matrixStats mnormt sda sparseLDA]; };
   FAMILY = derive2 { name="FAMILY"; version="0.1.19"; sha256="1912l2zj2cmh8yx8lkg8fpgvfddn6wbi1vrr4yx04mh73gk1s5mk"; depends=[pheatmap pROC]; };
   FAMT = derive2 { name="FAMT"; version="2.5"; sha256="0mn85yy9zmiklfwqjbhbhzbawwp2yqrm9pvm8jhasn9c3kw1pcp2"; depends=[impute mnormt]; };
   FAOSTAT = derive2 { name="FAOSTAT"; version="2.0"; sha256="06z8c964sf73ld4v9vybqjsdxskxp3ssyv0a3mpcs9la5y7n9jaz"; depends=[classInt data_table ggplot2 labeling MASS plyr RJSONIO scales]; };
   FAdist = derive2 { name="FAdist"; version="2.2"; sha256="0nw3w4g7y846bm57xyjnb13g7z746kxf8mb2hnljwwsypcg6i2n8"; depends=[]; };
-  FAiR = derive2 { name="FAiR"; version="0.4-15"; sha256="18nj95fiy3j7kf4nzf692dxja3msnaaj5csg745bnajb48l606wz"; depends=[gWidgetsRGtk2 Matrix rgenoud rrcov]; };
   FAmle = derive2 { name="FAmle"; version="1.3.5"; sha256="1j6x5bbxnrwp9d6xlxc861xslawzfqhi3d11nphyc97afsz0ymnr"; depends=[mvtnorm]; };
   FAwR = derive2 { name="FAwR"; version="1.1.1"; sha256="1hzgaxinq81v4f9743lnlj3bkby8pwmaw1gq0fb4yxazav8y7ihy"; depends=[glpkAPI lattice MASS]; };
   FBFsearch = derive2 { name="FBFsearch"; version="1.1"; sha256="17fi501prnwwy5dh7kv7cx2zlz2dknjj542ga024s7jvg7i2rhg0"; depends=[Rcpp RcppArmadillo]; };
@@ -1067,14 +1089,14 @@ in with self; {
   FDRreg = derive2 { name="FDRreg"; version="0.1"; sha256="17hppvyncbmyqpi7sin9qsrgffrnx8xjcla2ra6y0sqzam1145y4"; depends=[fda mosaic Rcpp RcppArmadillo]; };
   FDRsampsize = derive2 { name="FDRsampsize"; version="1.0"; sha256="0g8kawzyi9x5yndvh330wzqw6rvcnprwq56ngd0j6z51hvvw8qhw"; depends=[]; };
   FDboost = derive2 { name="FDboost"; version="0.3-0"; sha256="06cwd8534k3h7mk6w9z7fyq0gvb74w12gxh3njmy4m7hw8yzicc8"; depends=[gamboostLSS MASS Matrix mboost mgcv stabs zoo]; };
-  FENmlm = derive2 { name="FENmlm"; version="1.0"; sha256="0mq1qa72hsz3pyqjnbyzcc7shr08cq3hng1fz53mn9mvp11vb135"; depends=[MASS Matrix numDeriv]; };
+  FENmlm = derive2 { name="FENmlm"; version="2.1.0"; sha256="112n9px4hw2k7kgbkfvw9my6fjwb2ggf2q2xrycn7dp3wblsmz20"; depends=[MASS Matrix numDeriv Rcpp]; };
   FFD = derive2 { name="FFD"; version="1.0-6"; sha256="19yqb45qj54fmjkqfjbcqsx3wz6fk8inrqif9ds93xjkm6aaiqgp"; depends=[R2HTML tkrplot]; };
   FFTrees = derive2 { name="FFTrees"; version="1.3.5"; sha256="0qz3w7qh8lgl4fn2hmrd4mnp17vaz5yf7kcpcrm038xvqq3w5c5k"; depends=[circlize e1071 igraph progress randomForest rpart stringr yarrr]; };
   FField = derive2 { name="FField"; version="0.1.0"; sha256="05q16v2vv64qhbnf2l66dwzmvgzyaq8vxwwdabp534bw7z7zpi8q"; depends=[]; };
   FGN = derive2 { name="FGN"; version="2.0-12"; sha256="0jxawb4wm1vcp0131mdnc0r24dw8sd29ih0fc2wh6ahy7mxzajqn"; depends=[akima ltsa]; };
   FGSG = derive2 { name="FGSG"; version="1.0.2"; sha256="1r3sjhzf9gcnbcx6rqr1s555z8lcwm3fxl096md2jji336ijlk79"; depends=[]; };
   FGalgorithm = derive2 { name="FGalgorithm"; version="1.0"; sha256="1dq6yyb3l6c9fzvk9gs6pb240xb5hvc6fh8p3qd3c91b3m289mcc"; depends=[]; };
-  FHDI = derive2 { name="FHDI"; version="1.0"; sha256="0vyqgvcmdlcbplhl19xsl926ncnwwf8r8qb6zng5s8p7w29ydd1k"; depends=[]; };
+  FHDI = derive2 { name="FHDI"; version="1.2.1"; sha256="12vw8l0jk2z3i9gz108l2wrha6psqrg508rv1d44r4fss3xa233l"; depends=[]; };
   FHtest = derive2 { name="FHtest"; version="1.4"; sha256="1wsn0j9ydpp9nfswiqg21p09kgkvaq8fh0y0h8syqgizah7i8vs2"; depends=[interval KMsurv MASS perm survival]; };
   FI = derive2 { name="FI"; version="1.0"; sha256="17qzl8qvxklpqrzsmvw4wq3lyqz3zkidr7ihxc4vdzmmz69pyh2f"; depends=[]; };
   FIACH = derive2 { name="FIACH"; version="0.1.2"; sha256="151lc5m8pb7l07kxljm32zy5kd7a4zr5vgsgwsx7ywhijh0r0585"; depends=[Rcpp RcppArmadillo RNiftyReg tkrplot]; };
@@ -1098,11 +1120,11 @@ in with self; {
   FRAPO = derive2 { name="FRAPO"; version="0.4-1"; sha256="0mjcrplxr0cyybp5hzzwbq5j03w0f3iiiv1yk7mdqr5gb368dchq"; depends=[cccp Rglpk timeSeries]; };
   FRB = derive2 { name="FRB"; version="1.8"; sha256="13rp4gqldx84mngrdv5fa9xamkng7b3kgy30ywykcx46gmrym6ps"; depends=[corpcor rrcov]; };
   FRCC = derive2 { name="FRCC"; version="1.0"; sha256="1g1rsdqsvwf7wc16dj16y6r0347j8jsv5l1pxvj1h0579zinaf2b"; depends=[calibrate CCP corpcor MASS]; };
-  FREGAT = derive2 { name="FREGAT"; version="1.0.3"; sha256="01gc6pcj7fsg3ha2ykaji75b7iasrbjcmqhdlbdnhyzzakg50mpl"; depends=[Matrix]; };
+  FREGAT = derive2 { name="FREGAT"; version="1.1.0"; sha256="04rcbwbwi53d8his0ss9hj4s2c28r292f4f2ayl70av7k74nnccy"; depends=[Matrix]; };
   FREQ = derive2 { name="FREQ"; version="1.0"; sha256="01nra30pbnqdd63pa87lcws3hnhhzybcjvx2jqyxjghn6khz47j0"; depends=[]; };
-  FRESA_CAD = derive2 { name="FRESA.CAD"; version="2.2.1"; sha256="065iywjay4a06w97lg2z98qq0j60flq4srchyg7c2a3pjrwppqc2"; depends=[Hmisc miscTools pROC Rcpp RcppArmadillo stringr]; };
+  FRESA_CAD = derive2 { name="FRESA.CAD"; version="3.0.1"; sha256="05hcds1g1hkpr3fww1i462p633xlhwv594fpbphvw8fm10mc0hns"; depends=[Hmisc miscTools pROC Rcpp RcppArmadillo stringr]; };
   FREddyPro = derive2 { name="FREddyPro"; version="1.0"; sha256="0h2rdydcx9pwjl1zxghzb5vqynrwdkscyq6c9adjgz4dngfwyzsw"; depends=[dismo ggplot2 lubridate raster RColorBrewer sp]; };
-  FRK = derive2 { name="FRK"; version="0.1.6"; sha256="1gya901dqjizmwrs0xg8z4bv73nk1j0d173w3iifhfwqdr5n6xhr"; depends=[digest dplyr ggplot2 Hmisc Matrix plyr Rcpp sp spacetime]; };
+  FRK = derive2 { name="FRK"; version="0.1.8"; sha256="037rk9l9bl65wskrii07x4z0g0ic92fx7i0p522bgy53qxa3sbq0"; depends=[digest dplyr ggplot2 Hmisc Matrix plyr Rcpp sp spacetime]; };
   FRegSigCom = derive2 { name="FRegSigCom"; version="0.1.0"; sha256="02lvgxxr12rfs4k7dg3rl249nbvfkqaywas3k6jhm378j3j8yaaf"; depends=[fda]; };
   FSA = derive2 { name="FSA"; version="0.8.17"; sha256="1mpkbz5q4xbncmwqrylww679ghz52fsr81flavkksb8ljr4z6f7p"; depends=[car dplyr dunn_test epitools gplots lmtest plotrix plyr sciplot]; };
   FSAdata = derive2 { name="FSAdata"; version="0.3.6"; sha256="0r4g3s4a7hizxj7zlp8wb5sldnx6kc99vak8ww715bhzpzq40qf8"; depends=[]; };
@@ -1120,12 +1142,12 @@ in with self; {
   FactoClass = derive2 { name="FactoClass"; version="1.1.6"; sha256="0wkz1kvpsl4z688y9qwp3hlycn66vbsl85s70wwv8ww12z3dwpcd"; depends=[ade4 KernSmooth scatterplot3d xtable]; };
   FactoInvestigate = derive2 { name="FactoInvestigate"; version="1.1"; sha256="09fnlqwnijg94yfm3q41pdck9yxaq037m7421g4hdxaigljjb6ml"; depends=[FactoMineR rmarkdown rrcov]; };
   FactoMineR = derive2 { name="FactoMineR"; version="1.39"; sha256="12m0yi4w3iw07gx8viwvy8v8l1qh3qr7ghv39cdb2g0zgmnivfxh"; depends=[car cluster ellipse flashClust lattice leaps MASS scatterplot3d]; };
-  FactoRizationMachines = derive2 { name="FactoRizationMachines"; version="0.35"; sha256="1cz0cdz0albq9cxhxrsqdvz2q30xsdmmcvgmyiv6k0iwxb6cfhva"; depends=[Matrix Rcpp]; };
   FactorsR = derive2 { name="FactorsR"; version="1.2"; sha256="0y6r5ch0h0sag1xinvnjr7q4495naygvi5iiqq9bc51ijv228c0m"; depends=[]; };
-  Factoshiny = derive2 { name="Factoshiny"; version="1.0.5"; sha256="1jqk80raqf3kxympkqfayzwwc61yipzh4cbklrb9kmay5ryg4gj9"; depends=[colourpicker FactoMineR shiny]; };
+  Factoshiny = derive2 { name="Factoshiny"; version="1.0.6"; sha256="1rb16g4gqq9mmwgpp94j9g5iv5p1psjqllsp9qn7ccccmgn6nnw9"; depends=[colourpicker FactoMineR shiny]; };
   Fahrmeir = derive2 { name="Fahrmeir"; version="2016.5.31"; sha256="16fbc1zb9x9p04bl7y5nd375pha6bd3hfqqchlk1bqxrj4879y5g"; depends=[]; };
   FamEvent = derive2 { name="FamEvent"; version="1.3"; sha256="0jf4ph9mskycyckyg9biy0h1zk5q6nvj8669zfh8nfnnn2yh3s48"; depends=[kinship2 MASS survival truncnorm]; };
   Familias = derive2 { name="Familias"; version="2.4"; sha256="1k6ig2zfkr1a4s3s85ygixmmsrb5m8vqqab8l5ffkspgjvh4dfz2"; depends=[kinship2 paramlink Rsolnp]; };
+  FarmSelect = derive2 { name="FarmSelect"; version="1.0.1"; sha256="1qpa46igan3dqgn4ny2lmj08y6jk7krp7pb27afi694nw5l3l97h"; depends=[glmnet ncvreg Rcpp RcppArmadillo]; };
   FarmTest = derive2 { name="FarmTest"; version="1.0.1"; sha256="0h829706ilq2czjnn48wpwb09ryx0nwbl953m6p6z1wp4a3dzcv4"; depends=[Rcpp RcppArmadillo]; };
   FastBandChol = derive2 { name="FastBandChol"; version="0.1.1"; sha256="1hlgipn792vaylvc0r44clkjcnkns6p241a1fs8sb3gpq81naazk"; depends=[Rcpp RcppArmadillo]; };
   FastGP = derive2 { name="FastGP"; version="1.2"; sha256="120qai1yw3yhwm762zridk78n4qclpivwm9f2hkij4bz851qibqv"; depends=[MASS mvtnorm rbenchmark Rcpp RcppEigen]; };
@@ -1141,7 +1163,7 @@ in with self; {
   FateID = derive2 { name="FateID"; version="0.1.0"; sha256="0q2pq5w93n2zh0qz96b33pc9bbjfp1dqzsi1kcizi468a7jgkfmx"; depends=[caTools DESeq2 destiny lle locfit pheatmap princurve randomForest RColorBrewer rgl Rtsne som]; };
   FeaLect = derive2 { name="FeaLect"; version="1.10"; sha256="1r7rgcadrqjhxn2g2w16axygsck82fprxg7l14ai11bn4b7h4pmb"; depends=[lars rms]; };
   FeatureHashing = derive2 { name="FeatureHashing"; version="0.9.1.1"; sha256="1y46bk2yddq0n8p1kj6fwi9q23lsblsrlgf7b630vcbvv8mpz5x2"; depends=[BH digest magrittr Matrix Rcpp]; };
-  FedData = derive2 { name="FedData"; version="2.4.7"; sha256="14wddw8mnm2imdl1skimyyl9pyqyaz2z5z4kabflkv51l24n93fm"; depends=[curl data_table devtools dplyr foreach Hmisc igraph lubridate magrittr ncdf4 raster readr rgdal rgeos soilDB sp]; };
+  FedData = derive2 { name="FedData"; version="2.5.1"; sha256="1yvmy7y26rqrxqap8nicdfrh3s66nyrcn5lvasnairaz1fvx5qxs"; depends=[curl data_table devtools dplyr foreach Hmisc igraph lubridate magrittr ncdf4 raster readr rgdal rgeos soilDB sp stringr]; };
   FeedbackTS = derive2 { name="FeedbackTS"; version="1.4"; sha256="1mcsr48hvrpfnk2f0z1bc8556jf848bpd8prm3y46gqdj452wpmm"; depends=[geoR mapdata maps proj4 sp]; };
   Fgmutils = derive2 { name="Fgmutils"; version="0.9.4"; sha256="0k5pafgrcb7smklgzgw2mf6npj55nm5fsr6k0xp6ji380rvdxc0y"; depends=[data_table devEMF ggplot2 gridExtra plyr png ReporteRs sqldf stringr]; };
   FieldSim = derive2 { name="FieldSim"; version="3.2.1"; sha256="1snz2wja3lsgxys0mdlrjjvk5575cyd64mjipafibwcs97bva5x1"; depends=[RColorBrewer rgl]; };
@@ -1149,18 +1171,19 @@ in with self; {
   FinAsym = derive2 { name="FinAsym"; version="1.0"; sha256="0v15ydz4sq9djwcdcfp90mk8l951rry7h91d7asgg53mddbxjj6f"; depends=[]; };
   FinCal = derive2 { name="FinCal"; version="0.6.3"; sha256="1clvnvhpf2krrf8flhmdxmys6ym3xw3v4v07kk1if4xb0dfk9wgy"; depends=[ggplot2 RCurl reshape2]; };
   FinCovRegularization = derive2 { name="FinCovRegularization"; version="1.1.0"; sha256="0h3i46s0rpqvgnqgjwqrlrfa3vv5jn2hm6bqc0ijwmrr9f80g4ir"; depends=[quadprog]; };
-  FinancialInstrument = derive2 { name="FinancialInstrument"; version="1.2.0"; sha256="0lx8gqmnapyizlg0qdcjy8xrkpbhj0f7nc95l86a6xy82hz62dzb"; depends=[quantmod TTR xts zoo]; };
+  FinancialInstrument = derive2 { name="FinancialInstrument"; version="1.3.1"; sha256="0f1zaclrcmpkdhcfc8a09f7lsf2b7gfyd7js3173qckn84a01f3w"; depends=[quantmod TTR xts zoo]; };
   FinancialMath = derive2 { name="FinancialMath"; version="0.1.1"; sha256="11nhphvd7bvbc7xfs85rib763r1mpvxmsj6hgzfib5aifib5k5js"; depends=[]; };
   FindAllRoots = derive2 { name="FindAllRoots"; version="1.0"; sha256="0n4wfm21qj5zn06jqnzxa0w9mfn18dqi6hk1jjqa56dxqw1k7vw0"; depends=[]; };
-  FindIt = derive2 { name="FindIt"; version="1.1.2"; sha256="0mj68jl7f8n1r97jzyl75cnr60a26kvj07aw85q3hhx7n7vzmldh"; depends=[arm ggplot2 glinternet glmnet igraph lars lmtest Matrix quadprog sandwich]; };
+  FindIt = derive2 { name="FindIt"; version="1.1.3"; sha256="1d4cvd4651fdbwmj83q2x9vwvg92fbmq8112z7ian8n96n30rchd"; depends=[arm ggplot2 glinternet glmnet igraph lars lmtest Matrix quadprog sandwich]; };
   FindMinIC = derive2 { name="FindMinIC"; version="1.6"; sha256="0vlr56nw32msvz8bljrw82nzrnazncs6nz7zisidffm2v3najkar"; depends=[nlme sets]; };
   FinePop = derive2 { name="FinePop"; version="1.4.1"; sha256="06wabgrxfq11ncbll5d0f07kkh23w2hrvjx8k1vy55q9f1dwd3sb"; depends=[]; };
   FisHiCal = derive2 { name="FisHiCal"; version="1.1"; sha256="1dds629jlja3vw2l010n1334yh3z10nijqksr0q98ckd2yrwg2rf"; depends=[igraph Rcpp RcppArmadillo]; };
-  FishResp = derive2 { name="FishResp"; version="0.1.0"; sha256="12qxqf6i3390kad2cv7pk0nyh2jk5dgsk00pckzfkgsh7ivzhv0h"; depends=[chron lattice]; };
+  FishResp = derive2 { name="FishResp"; version="0.2.0"; sha256="1iscxa06pqd6rci3fwdxq2pqyiirr2fzbhs9c9xwyp3c9cmamv8h"; depends=[chron lattice mclust respirometry rMR]; };
   FisherEM = derive2 { name="FisherEM"; version="1.4"; sha256="1lhkyyk82i6alxyiqrvy5fx60f8vab0y62zmw5fjaq6h0vczqn3s"; depends=[elasticnet MASS]; };
   FitAR = derive2 { name="FitAR"; version="1.94"; sha256="1mkk3kvfq4v0pdabnhbwrk31ji2mv2v6ns16xsvvr1qyg2fnx6hq"; depends=[bestglm lattice leaps ltsa]; };
   FitARMA = derive2 { name="FitARMA"; version="1.6"; sha256="1r9mqrqkm4wh3nd6v9wmpj23gw21i4p89p6z4c7639kn4f590ldk"; depends=[FitAR]; };
   FixSeqMTP = derive2 { name="FixSeqMTP"; version="0.1.2"; sha256="0v1cwq8gapgandm7wiw8p6av6qigydlpmwi6w02p1y7f0hf5ifnp"; depends=[]; };
+  FixedPoint = derive2 { name="FixedPoint"; version="0.2"; sha256="1gmh9ipv010q4lgpnka1rwfza5c7llgjpn7yvcsvlxglmplh8969"; depends=[MASS]; };
   FlexDir = derive2 { name="FlexDir"; version="1.0"; sha256="1gb5alv9jsnw0135g63cy757pxhdw6cgwfm8dpcm8dj9zqg10dkm"; depends=[]; };
   FlexParamCurve = derive2 { name="FlexParamCurve"; version="1.5-3"; sha256="0766ghwbdd7r4yj5xf31hnknn775ziw1hhrn13wf8bibyd8blz70"; depends=[nlme]; };
   FlowRegEnvCost = derive2 { name="FlowRegEnvCost"; version="0.1.1"; sha256="0lw4kv4z0s23jy11y53rxxh7zxa7vajxrcnjgxd74xxs64vjlj88"; depends=[zoo]; };
@@ -1169,6 +1192,7 @@ in with self; {
   ForIT = derive2 { name="ForIT"; version="1.0"; sha256="0mi2cw09mbc54s8qwcwxin2na1gfyi60cdssy2ncynma7alq3733"; depends=[]; };
   ForImp = derive2 { name="ForImp"; version="1.0.3"; sha256="0ai4i6q233sdsi8xilpbkxjqdf4pxw93clkdkhcxal6q43rnf7vd"; depends=[homals mvtnorm sampling]; };
   ForeCA = derive2 { name="ForeCA"; version="0.2.4"; sha256="1i19lmhl1kgfnd7zipjr6xp5ir9rvjy13sbq321jaf8ya60bjdd9"; depends=[ifultools MASS reshape2 sapa]; };
+  ForecastComb = derive2 { name="ForecastComb"; version="1.1"; sha256="1ki769m3cw3kb8jhbrgiwssspszsipmg2hlbk4ifldi8s19l9m12"; depends=[forecast ggplot2 Matrix mtsdi psych quadprog quantreg]; };
   ForecastCombinations = derive2 { name="ForecastCombinations"; version="1.1"; sha256="07vzgm2jy992p1l9b8rsv2lbc8cbfzvql85n5ah4p4l3zjxdxgk9"; depends=[quadprog quantreg]; };
   ForecastFramework = derive2 { name="ForecastFramework"; version="0.9.0"; sha256="131h9f148wn89znzsnym43amlvf4s7jzg4f2p7ld9ns7727sf56q"; depends=[abind dplyr lubridate magrittr R6 reshape2]; };
   ForestTools = derive2 { name="ForestTools"; version="0.1.5"; sha256="0yjyc5i2jhagvwpzg420zhhygs966ncjn9aggh4gd4zdsi0nzqcx"; depends=[APfun imager raster rgeos sp TileManager]; };
@@ -1179,11 +1203,11 @@ in with self; {
   FrF2 = derive2 { name="FrF2"; version="1.7-2"; sha256="1qjgx7zbnabbs4zq7hn3j1i1xyy4yjwnz7pn25kz9s3szqr1fk66"; depends=[BsMD DoE_base igraph scatterplot3d sfsmisc]; };
   FrF2_catlg128 = derive2 { name="FrF2.catlg128"; version="1.2-1"; sha256="0i4m5zb9dazpvmnp8wh3k51bm0vykh4gncnhdg71mfk4hzrfpdac"; depends=[FrF2]; };
   FractalParameterEstimation = derive2 { name="FractalParameterEstimation"; version="1.1.1"; sha256="0l015v99hzmiyic0klvq71ljk9f8ipr57ki7x4cjyz1gam9f84p5"; depends=[]; };
-  Fragman = derive2 { name="Fragman"; version="1.0.7"; sha256="0dh1gk2arj7r6zd5dhkmxpr7a1hd3pl8x5klmlsg4n6rwsx2p4v8"; depends=[]; };
+  Fragman = derive2 { name="Fragman"; version="1.0.9"; sha256="03vmvmnyza4i46v1awkdjz6ccbsiq49dm0mlmwsm801rq6yfihgp"; depends=[]; };
   Frames2 = derive2 { name="Frames2"; version="0.2.1"; sha256="0xbz19v5r1h15p8mf94vacw04h3kvmm88ayy4b1aqxrd925n63mw"; depends=[MASS nnet sampling]; };
-  FreeSortR = derive2 { name="FreeSortR"; version="1.2"; sha256="01h29p9qhlkd2qmmmw23wh9lrsggvp1h3r2laqi2lln7d7srcwbj"; depends=[ellipse smacof vegan]; };
+  FreeSortR = derive2 { name="FreeSortR"; version="1.3"; sha256="1m6ahhixbbizzn09pz71zvinrdshn3j6gmy05jdxa9d932agqk0w"; depends=[ellipse smacof vegan]; };
   FreqProf = derive2 { name="FreqProf"; version="0.0.1"; sha256="1yqn2435l2sghfcv5mma0rv9yqvpa69z8cqqsjlrlbih9gib82d4"; depends=[ggplot2 reshape2 shiny]; };
-  FunChisq = derive2 { name="FunChisq"; version="2.4.3"; sha256="1wy76ich0bibf4938m97iww8zilgycha8351ryc3fqid0v78xzvg"; depends=[BH Rcpp]; };
+  FunChisq = derive2 { name="FunChisq"; version="2.4.4"; sha256="0wcxs70xkp2dlk3vrp4jw1vvjivdyv1q4iinmavvzhxhf3qpv1am"; depends=[BH Rcpp]; };
   FunCluster = derive2 { name="FunCluster"; version="1.09"; sha256="0i73asn1w4s6ydf2ddn5wpr0mwbbxzgmaly1pslarzkx71wk03fz"; depends=[cluster Hmisc]; };
   FuncMap = derive2 { name="FuncMap"; version="1.0.8"; sha256="04rfmdy1hzxqy16csj6cf3x2kj9lg1xxvvnn494xjdwjdkfkyl09"; depends=[mvbutils]; };
   Funclustering = derive2 { name="Funclustering"; version="1.0.1"; sha256="0i6g98mfgdyc9hdzvviynrgqhkzicp8y6s0scqy3ifgk9h1k79dw"; depends=[fda Rcpp RcppEigen]; };
@@ -1193,7 +1217,7 @@ in with self; {
   FuzzyAHP = derive2 { name="FuzzyAHP"; version="0.9.0"; sha256="02c08rzmmdd2l84jlzb0vck9m08afm7j599n0g09hffflcrb3fz7"; depends=[MASS]; };
   FuzzyLP = derive2 { name="FuzzyLP"; version="0.1-5"; sha256="1achmsc107b26d266q0vmip8vi3qaa5z0p183z2fjdm7zh9ch6ag"; depends=[FuzzyNumbers ROI ROI_plugin_glpk]; };
   FuzzyMCDM = derive2 { name="FuzzyMCDM"; version="1.1"; sha256="0ss0s65mm6j0nax4mb9g668d9n9cgl0l016mc3h9hbjxfpqrbkks"; depends=[RankAggreg]; };
-  FuzzyNumbers = derive2 { name="FuzzyNumbers"; version="0.4-1"; sha256="15i0chp43y8xfyzkjrbljmdvgjjx9w1l5ayhvavk9y85pwb147b8"; depends=[]; };
+  FuzzyNumbers = derive2 { name="FuzzyNumbers"; version="0.4-2"; sha256="0nvnz5df25slqdwnlw1fdv3xx9sz980x71805h8baw32ajg28a72"; depends=[]; };
   FuzzyNumbers_Ext_2 = derive2 { name="FuzzyNumbers.Ext.2"; version="3.2"; sha256="0gldq0bg1p1vmrn35prha44d7lyymz0jzshdyp2c5rx433mny7h5"; depends=[FuzzyNumbers]; };
   FuzzyR = derive2 { name="FuzzyR"; version="2.1"; sha256="08mhwzyksw0snxxcwn2kg62ya8smfvrls30znqhmnbkn5ijz0642"; depends=[plyr shiny]; };
   FuzzyStatProb = derive2 { name="FuzzyStatProb"; version="2.0.3"; sha256="0ry2cr5ds7kd7vk6ihdg68gqs2rv6qfmzlszr33a9ia5gsbi8b7b"; depends=[DEoptim FuzzyNumbers MultinomialCI]; };
@@ -1202,7 +1226,6 @@ in with self; {
   G1DBN = derive2 { name="G1DBN"; version="3.1.1"; sha256="015rw3bpz32a8254janddgg1ip947qgcvmiwx5r3v7g8n854bwxn"; depends=[igraph MASS]; };
   G2Sd = derive2 { name="G2Sd"; version="2.1.5"; sha256="165i6x2k56vwhk5p2p5m9vjmp9flblsapjdlz7nw9b719l6xz5zk"; depends=[ggplot2 reshape2 rJava shiny xlsx xlsxjars]; };
   GA = derive2 { name="GA"; version="3.0.2"; sha256="0jpgbniyxvilnr1jv6vmrfgnar3qczvq819xjb70inp5f41zd6wx"; depends=[foreach iterators]; };
-  GA4Stratification = derive2 { name="GA4Stratification"; version="1.0"; sha256="0li23mrxjx72fir16j3q06fa32cicck4pfc30n0dy2lysf81m9gs"; depends=[]; };
   GABi = derive2 { name="GABi"; version="0.1"; sha256="1zmiaqbd1jrpiz9hk16s8rggcpl3xyyhjkkdliymx2p42vy5b5mf"; depends=[hash]; };
   GAD = derive2 { name="GAD"; version="1.1.1"; sha256="0lyrw0d7i7yn1wkqlbf3rg3dnijfwsjn3kdbsg19hmvwq6qpsak2"; depends=[matrixStats R_methodsS3]; };
   GADAG = derive2 { name="GADAG"; version="0.99.0"; sha256="1ycg48idrq2yrk1fxs16yl5wwg3kbfki8xppmh311rrzf75c6z4g"; depends=[igraph MASS Rcpp RcppArmadillo]; };
@@ -1213,7 +1236,7 @@ in with self; {
   GANPA = derive2 { name="GANPA"; version="1.0"; sha256="0ia8djv46jm397nxjrm9yc5gacf1r4z0ckiliz57cbrqwh7z2wpa"; depends=[GANPAdata]; };
   GANPAdata = derive2 { name="GANPAdata"; version="1.0"; sha256="0mhdadl7zgsacn59ym42magg3214k1xhabwn78fv7kgccszcgc86"; depends=[]; };
   GAR = derive2 { name="GAR"; version="1.1"; sha256="12xgk87bndinx7ibaasn51a9fad3ymvpjmixa7l18pfy99l3pcll"; depends=[httr jsonlite]; };
-  GAS = derive2 { name="GAS"; version="0.2.5"; sha256="037jwsqrms6mclg85hc30xw5fgalfzswc67lv4bz012ds7f2i171"; depends=[MASS numDeriv Rcpp RcppArmadillo Rsolnp xts zoo]; };
+  GAS = derive2 { name="GAS"; version="0.2.6"; sha256="18a3hagwfy0xa7abkwgf2pk5l2n0bxg4kr8y0m5iapkbc3gx5rvz"; depends=[MASS numDeriv Rcpp RcppArmadillo Rsolnp xts zoo]; };
   GAabbreviate = derive2 { name="GAabbreviate"; version="1.3"; sha256="0cq6bg3w0ji44rsz1p4j17fk0jg8rafbjixwi3fjdndc3yd874r5"; depends=[GA psych]; };
   GAparsimony = derive2 { name="GAparsimony"; version="0.9-1"; sha256="1j8r56pri7h0xr0fiihkwgccjb33n89lz8ah5p42bak7ay9fglkm"; depends=[foreach iterators]; };
   GB2 = derive2 { name="GB2"; version="2.1"; sha256="06rcck97pdm1rsb02cy0jd9fknv0mz5jwk364gsaahdk56ddk18a"; depends=[cubature hypergeo laeken numDeriv survey]; };
@@ -1221,38 +1244,41 @@ in with self; {
   GCAI_bias = derive2 { name="GCAI.bias"; version="1.0"; sha256="10092mwpmfbcga0n39a0i6g8xxch8xiwg15cckipw6yxjyx0sivc"; depends=[]; };
   GCD = derive2 { name="GCD"; version="3.0.5"; sha256="1ami5xw5xx464pxr9y1z9bb3dvj46vx3wrbh19w4g7sk8yjvh5nl"; depends=[]; };
   GCPM = derive2 { name="GCPM"; version="1.2.2"; sha256="0k2ng78bk3bxpj6nz80j5cvjd56zjz328ga68vyyc3hvdjgpspqj"; depends=[Rcpp RcppProgress]; };
-  GCalignR = derive2 { name="GCalignR"; version="1.0.0"; sha256="09qwxl39csrljkbfn3n0fxzypslhjzf10p61p0qmqkc9shh4yk6c"; depends=[ggplot2 pbapply readr reshape2 stringr]; };
+  GCalignR = derive2 { name="GCalignR"; version="1.0.1"; sha256="1p1zxf5s75ckyj7a61n43ix314p3b99knyg6z5d4sn5n417h2m42"; depends=[ggplot2 pbapply readr reshape2 stringr]; };
+  GD = derive2 { name="GD"; version="1.1"; sha256="1gl2d04xlpn31940z75zbcnv6a3bdcc37bl4yq6hqph4snxbnbgk"; depends=[BAMMtools ggplot2]; };
   GDAdata = derive2 { name="GDAdata"; version="0.93"; sha256="13ks97i289rc4i7gpqrifwbj0m9rx8csjhnfg8mad10qmjwz7p8b"; depends=[]; };
   GDAtools = derive2 { name="GDAtools"; version="1.4"; sha256="1i5g7gzl3fkhwxqizqwrn8098s5lrr0mk17wmpyf92s1sy315cpv"; depends=[FactoMineR nleqslv nnet]; };
   GDELTtools = derive2 { name="GDELTtools"; version="1.2"; sha256="1rx6kjh7kmyycqapvbizcxkcfp09qvqv7k8f25v333sxkacpz6p5"; depends=[plyr TimeWarp]; };
   GDINA = derive2 { name="GDINA"; version="1.4.2"; sha256="14686mkyxk7gjp0ivz1wkmry15qrf50fcwwza1j98791yjkqsbyf"; depends=[alabama data_table ggplot2 MASS nloptr numDeriv Rcpp RcppArmadillo Rsolnp]; };
   GEEaSPU = derive2 { name="GEEaSPU"; version="1.0.2"; sha256="02pwjqd94kranc1f69bx9rzk27kchavhvhl9fygjhrr40nwq3pbg"; depends=[gee Rcpp RcppArmadillo]; };
   GEEmediate = derive2 { name="GEEmediate"; version="1.1.1"; sha256="1akgl4j38x4qf3z9d6z7cgjd7x9f0k3lrzyrzgykqhrzmbh68z2m"; depends=[gee]; };
-  GENEAclassify = derive2 { name="GENEAclassify"; version="1.4.5"; sha256="1hrsdpfk0iz0agi3rms43fk0yjv5ys10awqfxgwz9r9qfgczkh7j"; depends=[changepoint GENEAread MASS rpart signal]; };
+  GENEAclassify = derive2 { name="GENEAclassify"; version="1.4.9"; sha256="1imq71nhr0bc08w8jvw57fvghczn1p3vb1n7xnk7i7n6aq23dzsx"; depends=[changepoint GENEAread MASS rpart signal]; };
   GENEAread = derive2 { name="GENEAread"; version="1.1.1"; sha256="0c3d76yl8dqclk8zhhgrd6bv6b599vkpbyg3hjspb6npdw6zs6k8"; depends=[bitops]; };
+  GENEAsphere = derive2 { name="GENEAsphere"; version="1.4"; sha256="0z6qazcgjcs03zz26167dxg6mgjaq1z0qdsa4ggh32813l4k0ijw"; depends=[GENEAread ggplot2 MASS misc3d rgl]; };
   GENLIB = derive2 { name="GENLIB"; version="1.0.4"; sha256="1gl8qsgm9iy57rlajgc47lfxah52jsg7lpj131a6813kj0c639l7"; depends=[bootstrap doParallel foreach kinship2 lattice Matrix quadprog Rcpp]; };
-  GEOmap = derive2 { name="GEOmap"; version="2.4-0"; sha256="0jhzsp5f427r652mnaw3zg0vv13jaz11bfbbxppmxvya6k2jimyg"; depends=[fields MBA RPMG splancs]; };
+  GEOmap = derive2 { name="GEOmap"; version="2.4-4"; sha256="0wk2v0fwcwcm59k711fg829h2w58wkd36im4mg974iai6mqif7qh"; depends=[fields MBA RPMG splancs]; };
   GERGM = derive2 { name="GERGM"; version="0.11.2"; sha256="0vvvbb7y5lqa60n7w14gm8r7gwgah593w63162amjxmdk9jir9bi"; depends=[BH coda ggplot2 igraph matrixcalc plyr Rcpp RcppArmadillo RcppParallel scales slackr stringr vegan]; };
   GESE = derive2 { name="GESE"; version="2.0.1"; sha256="0h3s2sbnv5wilr2mj6bnl2892p16pxrs341gg6jql1a540p669sk"; depends=[kinship2]; };
   GESTr = derive2 { name="GESTr"; version="0.1"; sha256="1q12l2vcq6bcyybnknrmfbm6rpzcmxgq2vyj33xwhkmm9g2ii9k6"; depends=[gtools mclust]; };
   GEVStableGarch = derive2 { name="GEVStableGarch"; version="1.1"; sha256="1iypv0k4cbvsdyglgvf7y52sqvl5qcin627pjqwq42kisqynm8d7"; depends=[fExtremes fGarch Rsolnp skewt stabledist timeDate timeSeries]; };
-  GEVcdn = derive2 { name="GEVcdn"; version="1.1.5"; sha256="0nqym5jqgshx6ad4k4nwain6lnhx5y7s3b10f2xmcn93287p3rji"; depends=[VGAM]; };
+  GEVcdn = derive2 { name="GEVcdn"; version="1.1.6"; sha256="09lzhh16r1hsxa23jkq716yf3x9ap6fkkrz3ij2x83rvwznj8hb3"; depends=[VGAM]; };
   GEint = derive2 { name="GEint"; version="0.1.4"; sha256="0xwp8hqds4lf6nb8hcbvsj2000w7f90bi62b1v3iry0y6cbpwbjg"; depends=[bindata geepack mvtnorm nleqslv pracma rje speedglm]; };
   GExMap = derive2 { name="GExMap"; version="1.1.3"; sha256="1a6i2z9ndgia4v96nkr77cjqnbgxigqbqlibg82gwa0a6pl7r7nz"; depends=[Biobase multtest]; };
   GFA = derive2 { name="GFA"; version="1.0.3"; sha256="10sivsqxliwcrp0ay3n2my28zki6f8vpv8i9lbld8qinx1iv2mq3"; depends=[]; };
-  GFD = derive2 { name="GFD"; version="0.2.4"; sha256="10ijin08saamr0i2hcp0gjh372q2w30s0dia1bi9zxlwna1h9hxp"; depends=[magic MASS Matrix plotrix plyr]; };
+  GFD = derive2 { name="GFD"; version="0.2.5"; sha256="14bhqk5hi9w2078nn382ksgw37bx5r1jadizcrwbisglccxa0ncd"; depends=[magic MASS Matrix plotrix plyr]; };
   GFGM_copula = derive2 { name="GFGM.copula"; version="1.0.1"; sha256="1p7nklc9n5g7qbms8kbg08mp7zvgd4f58h7sa13571mmwbw3xmwd"; depends=[cmprsk joint_Cox]; };
   GGEBiplotGUI = derive2 { name="GGEBiplotGUI"; version="1.0-9"; sha256="0nd0ky3m1avy82z48g7hcysq0y0agxjxdn0g624dkm2w99avxw3j"; depends=[rgl tkrplot]; };
   GGEBiplots = derive2 { name="GGEBiplots"; version="0.1.1"; sha256="1xnxaylikjd378flw3rqw36z27b2limkmyad97zhf1cbva317d1b"; depends=[gge GGEBiplotGUI ggforce ggplot2 scales]; };
-  GGIR = derive2 { name="GGIR"; version="1.5-12"; sha256="1n8xckhv3x9clphp696clqzcvc5z4v9npw1y69dfk6m1f29gcik4"; depends=[data_table Rcpp]; };
+  GGIR = derive2 { name="GGIR"; version="1.5-17"; sha256="0p452p9xcbd0r9w2aqdiw4i740xxxbgi9hk4k5xqifdlkfg4gvmb"; depends=[data_table Rcpp]; };
   GGMridge = derive2 { name="GGMridge"; version="1.1"; sha256="0zbfvvp7l836m118m8nmdvw1w7xq6d3b7qirskjsq1dkk23j41hs"; depends=[MASS mvtnorm]; };
-  GGMselect = derive2 { name="GGMselect"; version="0.1-12"; sha256="1vjzmnnvnckr8s0badqm3l15arsa31fwg4wq6c2wx3g0hi1nzxxs"; depends=[gtools lars mvtnorm]; };
+  GGMselect = derive2 { name="GGMselect"; version="0.1-12.1"; sha256="0nrkbai9jps54ldx3cvwd4x4wingfj73najwx4bv98z8zxpbnky5"; depends=[gtools lars mvtnorm]; };
+  GGUM = derive2 { name="GGUM"; version="0.3.1"; sha256="1dgnhg0ggnp3f8qwzrcnapwzaraddnk2xsksin6pzybz21hfdvxd"; depends=[abind psych Rdpack viridis xlsx]; };
   GGally = derive2 { name="GGally"; version="1.3.2"; sha256="02px7j28wzbhcgcwm2m0pxb6g7s5zvphl64ix55pkvag4m2ky57l"; depends=[ggplot2 gtable plyr progress RColorBrewer reshape]; };
   GHQp = derive2 { name="GHQp"; version="1.0"; sha256="0qpcpwv7rz67qhz1p5k2im02jvs7l8z9sa6ypz13hig5fzm8j9bp"; depends=[statmod]; };
   GHap = derive2 { name="GHap"; version="1.2.2"; sha256="1qwv4llcixklr9d6lq4ljzbs8al80xnvqkcajnh8dbf3axmlmr5b"; depends=[bigmemory lme4 Matrix]; };
   GIGrvg = derive2 { name="GIGrvg"; version="0.5"; sha256="0mx4n4kf34343yiww80fw5yy0x624xsj71n8fr4dm0a2338pxq8v"; depends=[]; };
   GISTools = derive2 { name="GISTools"; version="0.7-4"; sha256="06alb5d2k4qj344i9cpgm3lz9m68rkmjqfx5k2hzn7z458xjrlxs"; depends=[maptools MASS RColorBrewer rgeos sp]; };
-  GJRM = derive2 { name="GJRM"; version="0.1-3"; sha256="11p1szc523z2fcglvllr22agigxwl6gypv04yb4i87zf43k5w5ri"; depends=[copula gamlss_dist ggplot2 magic matrixStats mgcv mnormt psych Rmpfr scam survey survival trust VGAM VineCopula]; };
+  GJRM = derive2 { name="GJRM"; version="0.1-4"; sha256="1bx2amhrrsghh6s6115z3qajkvnrrk1kjscx4x05ybw1b4pqyy28"; depends=[copula gamlss_dist ggplot2 magic matrixStats mgcv mnormt psych Rmpfr scam survey survival trust VGAM VineCopula]; };
   GK2011 = derive2 { name="GK2011"; version="0.1.3"; sha256="13vafhbgcsj485f12qv962y07v3hil3pla51vkl2b030amzy86jv"; depends=[]; };
   GLDEX = derive2 { name="GLDEX"; version="2.0.0.5"; sha256="0mr8qhccp8dndp43v8ym22f4djrjr8qcxbv61lwabk2462llwln6"; depends=[cluster]; };
   GLDreg = derive2 { name="GLDreg"; version="1.0.7"; sha256="1wjrr4x1k0fz8nx9idb4ysamldypriiypj96b5v028lx38jwsk3l"; depends=[ddst GLDEX]; };
@@ -1260,7 +1286,7 @@ in with self; {
   GLMMRR = derive2 { name="GLMMRR"; version="0.2.0"; sha256="0s3jfh720acfmbadilq2c6gql3yifsbijpmw1jkzbsdc87pqi1db"; depends=[lattice lme4]; };
   GLMaSPU = derive2 { name="GLMaSPU"; version="1.0"; sha256="0zx2bza5v5cfp9v7hf42s57522b6prawcwl77aa3kvjcnb0ish6g"; depends=[MASS mnormt mvtnorm Rcpp RcppArmadillo]; };
   GLSME = derive2 { name="GLSME"; version="1.0.3"; sha256="0flja5gk25k4z9hwskvdw4c1f88scc47xvc1l3d2447fkfrb0bwc"; depends=[corpcor mvtnorm]; };
-  GMAC = derive2 { name="GMAC"; version="2.0"; sha256="13g2qgr5pq19w89jl2xpavl8kx8x6mnj6dj82cgj7yjg3a4r0700"; depends=[qvalue]; };
+  GMAC = derive2 { name="GMAC"; version="3.0"; sha256="0c2cfpr8dik7j5br87hkvswrhqzj5vcna54gw6ffdf1rk9rz9j22"; depends=[]; };
   GMCM = derive2 { name="GMCM"; version="1.2.4"; sha256="1y0yr6i4l28qw22drca7r4mzqjfbpm3jdssfb7p8pc664g6vmm81"; depends=[Rcpp RcppArmadillo]; };
   GMD = derive2 { name="GMD"; version="0.3.3"; sha256="0hdya8ai210wxnkfra9bzyswk3gib5fm53fs61rh0nsmg3ysdga6"; depends=[gplots]; };
   GMDH = derive2 { name="GMDH"; version="1.6"; sha256="093glyz73246m5f2xb2xgbgi80haj4fanmr325byr99dnf4x35yn"; depends=[MASS]; };
@@ -1273,14 +1299,16 @@ in with self; {
   GPArotation = derive2 { name="GPArotation"; version="2014.11-1"; sha256="15jh5qqqwx47ara6glilzha87rnih0hs5fsz0jjqwv6wr1gw26rm"; depends=[]; };
   GPB = derive2 { name="GPB"; version="1.0"; sha256="18cdgz00j0j1rchzn2l253rii3b0iv9ipnh5sk3yvmwrqiabmrf8"; depends=[]; };
   GPC = derive2 { name="GPC"; version="0.1"; sha256="1naqy5g6a0z65wssfic5s7cw9v0zjckk526nian3l98ci22sz0j7"; depends=[ks lars orthopolynom randtoolbox]; };
+  GPCMlasso = derive2 { name="GPCMlasso"; version="0.1-1"; sha256="1qlbs9xxdn7q90afh5zc6fgp213fxyh3xmmhz5dm6azbwx92x3la"; depends=[car caret cubature ltm mirt mvtnorm Rcpp RcppArmadillo statmod TeachingDemos wordcloud]; };
   GPCSIV = derive2 { name="GPCSIV"; version="0.1.0"; sha256="118l792mwd54xsi3g8afg3vc6wds8j6fyaz3mwmq04mlcyblym4l"; depends=[scatterplot3d sqldf]; };
   GPFDA = derive2 { name="GPFDA"; version="2.2"; sha256="1xqk03g8b8hi1vdqh6a9wml8ln0ad6lmy14z8k8c4wdc5kbzdr0b"; depends=[fda fda_usc MASS spam]; };
   GPGame = derive2 { name="GPGame"; version="1.0.0"; sha256="1ln3smlhr0hz5nkbdfhrpvz6cn0jz21w8p0d3xlcv4szlmkx8lx6"; depends=[DiceDesign DiceKriging emoa GPareto KrigInv MASS mnormt mvtnorm Rcpp]; };
   GPLTR = derive2 { name="GPLTR"; version="1.2"; sha256="0b4s090jlp2qpqqr0b1ifwyf2fal156y7vg9mjkw53y623ms5pix"; depends=[rpart]; };
+  GPM = derive2 { name="GPM"; version="1.0"; sha256="0k2mglgmq1hb0x9gdypvzgi7s3vkdpf6qcvgyd4qc3mfg3avbnmk"; depends=[lattice lhs randtoolbox]; };
   GPPFourier = derive2 { name="GPPFourier"; version="2.1"; sha256="1wlzpiqlg5zx3rv29l1ql3apcaykvk72zc0anwxr152qlk910l2q"; depends=[mFilter Tides]; };
-  GPareto = derive2 { name="GPareto"; version="1.1.0"; sha256="0y4jskrbsv7apc5blchnzgd2mfphvrpc03qgbgyvnzpc0yq18vmh"; depends=[DiceDesign DiceKriging emoa KrigInv ks MASS pbivnorm pso randtoolbox Rcpp rgenoud]; };
+  GPareto = derive2 { name="GPareto"; version="1.1.1"; sha256="100r7v7vdkd8i8asb8fnz86rgmkd9kd5bnrc7kdzndfg6jsyycrg"; depends=[DiceDesign DiceKriging emoa KrigInv ks MASS pbivnorm pso randtoolbox Rcpp rgenoud rgl]; };
   GPfit = derive2 { name="GPfit"; version="1.0-0"; sha256="0g0g343ncqsqh88qq9qrf4xv5n3sa980kqbvklcx534dmn6a7n2i"; depends=[lattice lhs]; };
-  GPoM = derive2 { name="GPoM"; version="1.0"; sha256="14h9g2rg5yzw68hg2a3s2lp19ilq7dl1k3cjnd9k516b5gdm2izl"; depends=[deSolve rgl]; };
+  GPoM = derive2 { name="GPoM"; version="1.1"; sha256="0n1fnmwiygispihqgcx762wkvp28pnm8kcwlx9vxhpafswsp112q"; depends=[deSolve rgl]; };
   GPrank = derive2 { name="GPrank"; version="0.1.2"; sha256="0z9xhydnq04p872zl7glxhndmijjihfgffl6bijc9a0rs95zaacd"; depends=[gptk matrixStats RColorBrewer tigreBrowserWriter]; };
   GPseq = derive2 { name="GPseq"; version="0.5"; sha256="0k5xif44qk2ppvcyja16xshmfciq1h84l1w6d8dfkyryfajbc8ai"; depends=[]; };
   GPvam = derive2 { name="GPvam"; version="3.0-4"; sha256="1vqvm9647jnw91vpf4dhjjp9rc05n5k6qgzilfpmcg4a7zzi917k"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; };
@@ -1288,7 +1316,7 @@ in with self; {
   GRAPE = derive2 { name="GRAPE"; version="0.1.0"; sha256="0kcyz8x6yzq83hcwdlx7yw5jpww819f9d1hax19vn31ccq71xkyw"; depends=[]; };
   GRCdata = derive2 { name="GRCdata"; version="1.0"; sha256="0nshii6kfvffncgcrmm7wvniq94j9djj84jikcb6ck49viikkrky"; depends=[cubature nloptr]; };
   GROAN = derive2 { name="GROAN"; version="1.1.0"; sha256="06xcbdcg3rmb9939d9ansy75jn0axy0c36rmgjhcji8gf959kmyz"; depends=[plyr rrBLUP]; };
-  GRS_test = derive2 { name="GRS.test"; version="1.0"; sha256="1igyb3rma1v2arx1k16fanvzmlywx0n9lf5jz69vnf6z2qmqvrg5"; depends=[]; };
+  GRS_test = derive2 { name="GRS.test"; version="1.1"; sha256="1ap9453rj5zan6c3ix7jb1qxhxh42bfv295dgqbgjpdygjdlbm6n"; depends=[]; };
   GRTo = derive2 { name="GRTo"; version="1.3"; sha256="1xkcx2agvrpfnmplgaqx70vz303v8rhwnxdyr4hmdlf4h92lbv8i"; depends=[bootstrap]; };
   GRaF = derive2 { name="GRaF"; version="0.1-12"; sha256="1d7mr2z49v6ch4jbzh0dj2yjy2c5p51ws38xfz233sjz475snajr"; depends=[dismo]; };
   GSA = derive2 { name="GSA"; version="1.03"; sha256="1h1sbpn1rrdh44w4fx2avc7x24ba40mvpd8b2x5wfrc7a294zf6z"; depends=[]; };
@@ -1300,7 +1328,7 @@ in with self; {
   GSIF = derive2 { name="GSIF"; version="0.5-4"; sha256="1vh3dffi5hakk32rwaabw9k34wigd0n5bhzcyqhadl6fxjsaz6b6"; depends=[aqp dismo gstat plotKML plyr raster rgdal RSAGA scales sp]; };
   GSM = derive2 { name="GSM"; version="1.3.2"; sha256="04xjs9w4gaszwzxmsr7657ry2ywa9pvpwpczpvinxi8vpj347jbb"; depends=[gtools]; };
   GSMX = derive2 { name="GSMX"; version="1.3"; sha256="1n1d7rixj14ari46snsmi48qfmy00ihmzvayk3hkrp2d2d0xi2gh"; depends=[MASS]; };
-  GSODR = derive2 { name="GSODR"; version="1.1.1"; sha256="06asmqkkr6kck2mg9iaacgkc5wyyl37p3hc9cmrr5smiqc1jbhgk"; depends=[curl dplyr magrittr purrr R_utils readr rgdal rlang sp tibble]; };
+  GSODR = derive2 { name="GSODR"; version="1.1.2"; sha256="1zr19zik2ic38wg71gk9iapzmdh4z426djy8w4z25v148940liss"; depends=[curl dplyr magrittr purrr R_utils readr rgdal rlang sp tibble]; };
   GSSE = derive2 { name="GSSE"; version="0.1"; sha256="034mmxa6kjq5kgikhb5q75viagz5ck9irrjbxm26zq9099qxm13b"; depends=[Iso zoo]; };
   GSparO = derive2 { name="GSparO"; version="1.0"; sha256="0xna2crxqwy8fj0s79rxbdcaz9x912rp1vdwqv1557fsnmfv2yf0"; depends=[ggplot2 ThreeWay]; };
   GUIDE = derive2 { name="GUIDE"; version="1.2.3.1"; sha256="02chn2mzh6smmiv8rp00cq5rff18bqszazbk8svmvvlgn0a25pj4"; depends=[rpanel tkrplot]; };
@@ -1308,21 +1336,22 @@ in with self; {
   GUIProfiler = derive2 { name="GUIProfiler"; version="2.0.1"; sha256="10m4d7f2rhw6cmkrnw3jh4iqlkfphf4v7mpfwzw17laq0ncmsx5r"; depends=[graph MASS Nozzle_R1 proftools Rgraphviz rstudioapi]; };
   GUIgems = derive2 { name="GUIgems"; version="0.1"; sha256="0lmx8hw0496vk437p32l933cdb4vpi94f4kz58x20jj07c20maz6"; depends=[ggplot2 igraph MASS msm plyr rpanel stringr]; };
   GUTS = derive2 { name="GUTS"; version="1.0.4"; sha256="0mgvgi9vyd35gpm1sxk1pi5sx3nbwlbxqa7l0nazc1fq77fabai4"; depends=[Rcpp]; };
-  GUniFrac = derive2 { name="GUniFrac"; version="1.0"; sha256="0xr68yv3h2lwn7sxy8l5p9g1z3q9hihg9jamsyl70jj9b2ic80jn"; depends=[ape vegan]; };
+  GUniFrac = derive2 { name="GUniFrac"; version="1.1"; sha256="1vgij7c9b0afl5wzwcn0pjdvn8gqz2jxk5q0gchd9zk1qd10a1vl"; depends=[ape matrixStats vegan]; };
   GWAF = derive2 { name="GWAF"; version="2.2"; sha256="11lk1dy24y1d0biihy2aypdvlx569lw1pfjs51m54rhgpwzkw6yd"; depends=[coxme geepack lme4]; };
   GWASExactHW = derive2 { name="GWASExactHW"; version="1.01"; sha256="19qmk8h7kxmn9kzw0x4xns5p3qqz27xkqq4q6zmh4jzizd0fsl78"; depends=[]; };
-  GWASinlps = derive2 { name="GWASinlps"; version="1.0"; sha256="1g3zzw1q3cflnr5f3383rzq2rycxvvf2nzgdhrwbaj7j9vvxxl51"; depends=[mombf]; };
+  GWASinlps = derive2 { name="GWASinlps"; version="1.1"; sha256="1041yb5zn27a9srylmawj2kbkcsjz65x0apa413wyb32pz73l6ni"; depends=[horseshoe mombf]; };
   GWG = derive2 { name="GWG"; version="1.0"; sha256="1va0cd229dhhi1lmrkpwapcm96hrdmxilrmba02xnl7ikhisw0my"; depends=[]; };
   GWLelast = derive2 { name="GWLelast"; version="1.1"; sha256="0c3mcvmvxvgibja6rb8j2mhmmjny825wgvi1dw0pz8pq1kg1q0ay"; depends=[doParallel foreach geosphere glmnet sp spgwr]; };
   GWRM = derive2 { name="GWRM"; version="2.1.0.3"; sha256="16ahlf1pbcpgha50a7ml2c336by50r287kihwshiazshifi5p3n3"; depends=[doParallel foreach]; };
-  GWmodel = derive2 { name="GWmodel"; version="2.0-4"; sha256="1q4z715yi5rasmcxv1acy14sf18knk11cznqi481kxc4mhxl2ay2"; depends=[maptools Rcpp RcppArmadillo robustbase sp]; };
+  GWSDAT = derive2 { name="GWSDAT"; version="3.0.0"; sha256="1nyvbaxfh2hp3nk1lw6aksq2cjj2w4qa1cy7vjkrisl2dz0nfi2z"; depends=[deldir geometry Kendall lattice MASS Matrix readxl rhandsontable sf shiny shinycssloaders shinydashboard shinyjs sm sp splancs zoo]; };
+  GWmodel = derive2 { name="GWmodel"; version="2.0-5"; sha256="1v0a2fxs1nfm84vrggj1zmbij6kqzc5mgmqlvrh80hj3w87zpiry"; depends=[maptools Rcpp RcppArmadillo robustbase sp spdep]; };
   GWsignif = derive2 { name="GWsignif"; version="1.2"; sha256="0bss5s3ijnlckz44p7jj49bn2r8nwqckpzwzcv0vci915q8jfsj2"; depends=[]; };
   GaDiFPT = derive2 { name="GaDiFPT"; version="1.0"; sha256="15fnj1w30h0zdj032f3js0bbb1qlyk4b54a4aclykwzicqdgalkg"; depends=[]; };
   GameTheory = derive2 { name="GameTheory"; version="2.7"; sha256="0vb7sjia5s58gw9zpkzddps8knxvbrz7fbi3m6digl8bf5vwhxxw"; depends=[combinat gtools ineq kappalab lpSolveAPI]; };
   GameTheoryAllocation = derive2 { name="GameTheoryAllocation"; version="1.0"; sha256="0733vmyr0d9scjd5ixpnggr548snd7nj70knf5hbzc59nmbc5y11"; depends=[e1071 lpSolveAPI]; };
   Gammareg = derive2 { name="Gammareg"; version="1.0"; sha256="1a5wibnbd8jg0v8577n1x9kc358qpd4jz7l8h7r541sdpprm6wb0"; depends=[]; };
   GauPro = derive2 { name="GauPro"; version="0.2.2"; sha256="127agnhqbbavcf7sx0zq1c8ldh3w1d1iz5bpd1ixxkyaapmiq4qy"; depends=[lbfgs R6 Rcpp RcppArmadillo]; };
-  GeDS = derive2 { name="GeDS"; version="0.1.2"; sha256="07661z90ck3b0wz8nh700qq3g11rspd846k1v8k3dwn7300lmxbb"; depends=[Matrix Rcpp Rmpfr]; };
+  GeDS = derive2 { name="GeDS"; version="0.1.3"; sha256="1ddq4hnyl3m3s4cchccxiqphi742ljcm86zqpa01a5nrjbnr87x6"; depends=[Matrix Rcpp Rmpfr]; };
   GeNetIt = derive2 { name="GeNetIt"; version="0.1-1"; sha256="1xjz22m4yn642m0bqa33w4m2rygpxjwg43c54lw168jck9zzgv1f"; depends=[nlme raster rgeos sp spatialEco spdep]; };
   GenABEL = derive2 { name="GenABEL"; version="1.8-0"; sha256="0sd497qvik70iwv7wc8r50rhc5wx153pm8vif738wwqqp43chks3"; depends=[GenABEL_data MASS]; };
   GenABEL_data = derive2 { name="GenABEL.data"; version="1.0.0"; sha256="0p66fb0gynjx3mnfvnlz45cbn6xf49gwx9mfyxf584xfcggxaa1c"; depends=[]; };
@@ -1332,7 +1361,7 @@ in with self; {
   GenForImp = derive2 { name="GenForImp"; version="1.0"; sha256="1wcvi52fclcm6kknbjh4r9bpkc2rg8nk6cddnf5j8zqbvrwf4k5x"; depends=[mvtnorm sn]; };
   GenKern = derive2 { name="GenKern"; version="1.2-60"; sha256="12qmd9ydizl7h178ndn25i4xscjnrssl5k7bifwv94m0wrgj4x6c"; depends=[KernSmooth]; };
   GenOrd = derive2 { name="GenOrd"; version="1.4.0"; sha256="17mfrj1fwj8mri1w0bl2pw1rqriidmd67i7gpn9v56g9dzw5rzms"; depends=[MASS Matrix mvtnorm]; };
-  GenSA = derive2 { name="GenSA"; version="1.1.6"; sha256="1llhjhg39fd2pnm6kn8zjhw6kkg88wn7y3yizr8fna7qc3ixlcii"; depends=[]; };
+  GenSA = derive2 { name="GenSA"; version="1.1.7"; sha256="03xqwxm7v7rnihx730a4p65dfwhjh4345r3d78y0qxxplk8d76cx"; depends=[]; };
   GenWin = derive2 { name="GenWin"; version="0.1"; sha256="0jm537i4jn3azdpvd50y9p0fssfx2ym2n36d3zgnfd32gqckz3s4"; depends=[pspline]; };
   GeneClusterNet = derive2 { name="GeneClusterNet"; version="1.0.1"; sha256="1xi4c041c4m39f9wb5fklgmhi6ng78iwzzqch5xk9hx5blq6zd4m"; depends=[G1DBN igraph MASS]; };
   GeneCycle = derive2 { name="GeneCycle"; version="1.1.2"; sha256="1ghdzdddbv6cnxqd08amy4c4s5jsxa637r828ygffk6z76xjr6b6"; depends=[fdrtool longitudinal MASS]; };
@@ -1342,7 +1371,7 @@ in with self; {
   GeneReg = derive2 { name="GeneReg"; version="1.1.2"; sha256="081qc66mb17dwk886x9l2z4imklxnfs02yqql0ri9c47bpsga7wp"; depends=[igraph]; };
   GeneralOaxaca = derive2 { name="GeneralOaxaca"; version="1.0"; sha256="19j5c5xr6mdb6pmih94wbjas4yh0dmsqfggg8clvdxkpwk0h338v"; depends=[boot]; };
   GeneralizedHyperbolic = derive2 { name="GeneralizedHyperbolic"; version="0.8-1"; sha256="0rx07z5npawvsah2lhhkryzpj19sg0sl0w410gmff985ksdn285m"; depends=[DistributionUtils RUnit]; };
-  GeneralizedUmatrix = derive2 { name="GeneralizedUmatrix"; version="0.9.5"; sha256="0jz89z5qs0r46bby5d1ki49dj9n71x6i42llzpjqv3832kywqp86"; depends=[ggplot2 Rcpp RcppArmadillo shiny shinyjs]; };
+  GeneralizedUmatrix = derive2 { name="GeneralizedUmatrix"; version="1.0.0"; sha256="1r63ikfv5s1f3agl6i2ny84yzky0macxmknkavnzbn4sqb8cmrbd"; depends=[ggplot2 Rcpp RcppArmadillo]; };
   GeneticSubsetter = derive2 { name="GeneticSubsetter"; version="0.8"; sha256="0bd4snv3dwabc7mknmd2rjmffj67xq535x0bycajhd83d1jhjars"; depends=[]; };
   GenomicMating = derive2 { name="GenomicMating"; version="1.3"; sha256="1qnxr1dxw7xk6zncvql1lq4zba8vdfprhjgq56lzv1dckfddzfgc"; depends=[emoa Rcpp RcppArmadillo scatterplot3d]; };
   GenomicTools = derive2 { name="GenomicTools"; version="0.2.6"; sha256="19illcfcm34vr90kh4cbdwf7k8hy700dlzylsaicv3h4xi7iydgs"; depends=[circlize data_table gMWT Rcpp RcppArmadillo snpStats stringr]; };
@@ -1352,14 +1381,14 @@ in with self; {
   GeoLight = derive2 { name="GeoLight"; version="2.0.0"; sha256="1i49hyj3f5rcw0s6j2csnfwc6mnp5zn44vxjnk05wdkpw6dpvx5i"; depends=[changepoint fields maps MASS]; };
   GeoMongo = derive2 { name="GeoMongo"; version="1.0.1"; sha256="19wim724sgmxx9rd5yvmqdml0hppb92b8qvpl5zqrlnzxzm0ih5x"; depends=[data_table geojsonR R6 reticulate]; };
   GeoRange = derive2 { name="GeoRange"; version="0.1.0"; sha256="0krj9570wkhdvpaqkq3nf0maglqd44mpwn4v1bymvgpk1i1wf5p3"; depends=[moments proj4 raster sp velociraptr]; };
-  GeoXp = derive2 { name="GeoXp"; version="1.6.2"; sha256="18wdmdwb79ipdjdii068dz9f55b5ldxn95g5q6jcxsqwp0wldvw8"; depends=[KernSmooth quantreg rgeos rgl robustbase spdep splancs]; };
   GeomComb = derive2 { name="GeomComb"; version="1.0"; sha256="05xb6m2ciszxd13yhqdkildh9nsq19ss8885ngj6ynvbchqkii7r"; depends=[forecast ForecastCombinations ggplot2 Matrix mtsdi psych]; };
   GerminaR = derive2 { name="GerminaR"; version="1.2"; sha256="10x22xl3r93i5mc6w7m5mqm3z386dsffwrb8h9c1bznrnynnsy63"; depends=[agricolae assertthat dplyr DT ggplot2 gsheet gtools magrittr readxl shiny shinydashboard tibble tidyr]; };
+  GetDFPData = derive2 { name="GetDFPData"; version="0.6"; sha256="19srfls3fmxbjhwhsc3r76n34ls8s5940d831j4n93f4lzq33wyp"; depends=[curl dplyr readr reshape2 stringr tibble xlsx XML]; };
   GetHFData = derive2 { name="GetHFData"; version="1.5"; sha256="1lm2k37y86fn45hhvyswj60dql0m33kia0wirs3zc981s4nsxp0i"; depends=[curl dplyr lubridate RCurl readr stringr]; };
   GetITRData = derive2 { name="GetITRData"; version="0.6"; sha256="0llsx4x6h2a89ka8q7jf8cx77f6v2knjm7sr16dqwsm91rzg3yc2"; depends=[BETS curl dplyr readr reshape2 stringr tibble xlsx XML]; };
   GetLattesData = derive2 { name="GetLattesData"; version="0.9"; sha256="1rqhs8039m3ar76nail7gavw6678zs20r9dg98rp5igqx5jjys73"; depends=[curl dplyr readr stringdist stringr XML]; };
   GetR = derive2 { name="GetR"; version="0.1"; sha256="1b2wirhz4nhvmf863czwb8z8b42ilsyjjrg9rc4nd9b7nz50bmjg"; depends=[party]; };
-  GetTDData = derive2 { name="GetTDData"; version="1.3"; sha256="0x8hgpjk3ah5izr4da7xkazha5j737cq5y84qmjbsgaxn9jdmvj5"; depends=[bizdays curl RCurl readxl stringi stringr tidyr XML]; };
+  GetTDData = derive2 { name="GetTDData"; version="1.3.1"; sha256="1a8f22nxs85g2zznh1ma37lmycypg8f7d5kdhyb5vrirvrpi5p05"; depends=[bizdays curl RCurl readxl stringi stringr tidyr XML]; };
   GetoptLong = derive2 { name="GetoptLong"; version="0.1.6"; sha256="1d98gcvlvp9nz5lbnzr0kkpc2hbkx74hlhrnybqhg1gdwc3g09pm"; depends=[GlobalOptions rjson]; };
   GiANT = derive2 { name="GiANT"; version="1.2"; sha256="0h9jx2vpgpzlinf6v9mxj260r22nlqml8xnd2jknw36j5imim57w"; depends=[]; };
   GiNA = derive2 { name="GiNA"; version="1.0.1"; sha256="0his7wsgnggyv9526blxzxa1ni8hwq2ws64wkmha45nvvnm3dsiw"; depends=[doParallel EBImage foreach png]; };
@@ -1376,6 +1405,8 @@ in with self; {
   GoFKernel = derive2 { name="GoFKernel"; version="2.1-0"; sha256="17jd1dqwpki4mmzk695g25vvfwvkp4k7jhvw06dmdmn5j09hw373"; depends=[KernSmooth]; };
   GofKmt = derive2 { name="GofKmt"; version="2.0"; sha256="0018ljzlj7nkf12g0sqa8iyq3j2bnj9la3fwblx9lbdn8nxgllhn"; depends=[Rsolnp]; };
   GoodmanKruskal = derive2 { name="GoodmanKruskal"; version="0.0.2"; sha256="1qwarachkhc2yvjyxfcfbgjc1x9ni5xb7f93zviv8mz3c35bhs3b"; depends=[classInt corrplot]; };
+  GoogleKnowledgeGraphR = derive2 { name="GoogleKnowledgeGraphR"; version="0.1.0"; sha256="1jxiq1s48skn43pydsw8s67hf70v9fhhw2drcx9vni3c3szs44qd"; depends=[curl jsonlite]; };
+  GpGp = derive2 { name="GpGp"; version="0.1.0"; sha256="1z03fcpcjm7waxci4c0a233xs21l2ds3p993y3shp7snbplbrfgf"; depends=[FNN Rcpp]; };
   Grace = derive2 { name="Grace"; version="0.5.3"; sha256="0r41zvgdd5rqm15axqqssik6plwy7snpgw8m32labkfn3f0pp7n0"; depends=[glmnet MASS scalreg]; };
   GrammR = derive2 { name="GrammR"; version="1.1.0"; sha256="1rwvgznfxp7d3rzymyljj3pn3z3ggia1bhi4nvpgd79qd4cifi2g"; depends=[ape cluster GUniFrac gWidgets gWidgetsRGtk2 MASS rgl RGtk2]; };
   GraphFactor = derive2 { name="GraphFactor"; version="1.1"; sha256="1jxibd2d5b6vlq27m9ppmm96wsnkqn4pz66n9pwdl8wg2v85npw5"; depends=[igraph]; };
@@ -1407,13 +1438,13 @@ in with self; {
   HDGLM = derive2 { name="HDGLM"; version="0.1"; sha256="0a5lnh3780lsczj8339sp97c5y64a2gsdf77i56fvpxpphq0dnf8"; depends=[]; };
   HDInterval = derive2 { name="HDInterval"; version="0.1.3"; sha256="1zjddw8s6xc2gsz6285g3dzzarnhb77sra1dbxghgn2nrgn2y0i5"; depends=[]; };
   HDMD = derive2 { name="HDMD"; version="1.2"; sha256="0na0z08fdf47ghfl2r3fp9qg5pi99kvp7liymwxym2wglkwl4chq"; depends=[MASS psych]; };
-  HDPenReg = derive2 { name="HDPenReg"; version="0.93.1"; sha256="1av4x9xqf4y1qfdkh9f0msskj9fqimng1i9bdlgl2ycfn8a64cjp"; depends=[Matrix Rcpp rtkore]; };
+  HDPenReg = derive2 { name="HDPenReg"; version="0.93.2"; sha256="0blmp7cwsklp8aqdcyyjmv419cgc7iz0pb4629y8slqw0zq2n6gm"; depends=[Matrix Rcpp rtkore]; };
   HDclassif = derive2 { name="HDclassif"; version="2.0.2"; sha256="0gykjqqhrqz1x9xl867hxhrp197y3x4679zh9v84i1nd9yxlamah"; depends=[MASS rARPACK]; };
-  HDoutliers = derive2 { name="HDoutliers"; version="0.15"; sha256="01ylj4wnhqy8931lkhdgx552kv1h7hl4ngkpqbnhq75amyh34c46"; depends=[FactoMineR FNN mclust]; };
+  HDoutliers = derive2 { name="HDoutliers"; version="1.0"; sha256="0pby640bad0jcf1lkwg2g6flassb1pimnjm411c6x8rgvmiphc23"; depends=[FactoMineR FNN mclust]; };
   HDtest = derive2 { name="HDtest"; version="0.1"; sha256="0vlwpx9l6r0izfcf9fgna72w39w64b95s3q527mapjb6a3676avg"; depends=[checkmate doParallel expm foreach MASS mvtnorm]; };
   HDtweedie = derive2 { name="HDtweedie"; version="1.1"; sha256="14awd7sws0464f68f5xwnv1xvr0xflvx2z2zzcfj1csvk3af0zzj"; depends=[]; };
   HEAT = derive2 { name="HEAT"; version="1.2"; sha256="1qifqd06ifl0f5l44mkxapnkwhpm0b82yq6dhfw4f8yhb27wd0z2"; depends=[]; };
-  HEMDAG = derive2 { name="HEMDAG"; version="1.1.1"; sha256="152aii6ddrbhyj2z1x75vsr4c90bg85aq7vb2kmpz46h405n3bj8"; depends=[graph PerfMeas precrec preprocessCore RBGL]; };
+  HEMDAG = derive2 { name="HEMDAG"; version="2.0.1"; sha256="1sdgcc1adf21zd6qy48wkvnfakgpx7c4f750hnp8vjpanlrizp1w"; depends=[graph PerfMeas precrec preprocessCore RBGL]; };
   HGNChelper = derive2 { name="HGNChelper"; version="0.3.6"; sha256="1bm6zxwafbp65p6w4rk2y1bw7ig60br2mk75c4frdzqw3yw0zwxd"; depends=[]; };
   HH = derive2 { name="HH"; version="3.1-34"; sha256="1srr195ha8n4va30impm12p2kamkl36whl8g10pl80hwgg20pbqk"; depends=[abind colorspace gridExtra Hmisc lattice latticeExtra leaps multcomp RColorBrewer reshape2 Rmpfr shiny vcd]; };
   HHG = derive2 { name="HHG"; version="2.2"; sha256="114nfpdjdisryil9l8cws885qdskgrjm2cclx543hh4cdhpnkxnp"; depends=[Rcpp]; };
@@ -1429,24 +1460,24 @@ in with self; {
   HMDHFDplus = derive2 { name="HMDHFDplus"; version="1.1.8"; sha256="15z0war5isw9xnln7py3di8f45pwvdw6x6wljl18fcxpmanmlfcf"; depends=[RCurl XML]; };
   HMM = derive2 { name="HMM"; version="1.0"; sha256="0z0hcqfixx1l2a6d3lpy5hmh0n4gjgs0jnck441akpp3vh37glzw"; depends=[]; };
   HMMCont = derive2 { name="HMMCont"; version="1.0"; sha256="1drni4f72x83sprn65wnhw0pv1q8lfkgmxdr9h4rwv1accril85x"; depends=[]; };
+  HMMEsolver = derive2 { name="HMMEsolver"; version="0.1.0"; sha256="19iwy0nj0vw3cslrfdai1l1yg84c5diyxpy65jd2f419ag3rmki3"; depends=[Rcpp RcppArmadillo Rdpack]; };
   HMMoce = derive2 { name="HMMoce"; version="1.0.0"; sha256="0w2hrqjz75j9l6wimz9rsr8bwa5rvag0pavmyqkcb8jgqdgka8hx"; depends=[curl doParallel dplyr fields foreach imager locfit lubridate maptools raster RColorBrewer rgeos RNetCDF sp]; };
   HMMpa = derive2 { name="HMMpa"; version="1.0"; sha256="14r2axg42by49qm6avgv7g3xnc29bxlrni5fhc5vdz0wygkcrqhn"; depends=[]; };
-  HMP = derive2 { name="HMP"; version="1.5"; sha256="1jsvk0ban726qrf31gkq5c3gnyxvqv9jpcpk68md9xw3a2r3lxy6"; depends=[dirmult doParallel foreach ggplot2 gplots MASS rpart rpart_plot vegan]; };
+  HMP = derive2 { name="HMP"; version="1.5.1"; sha256="0v32pkgr9rhpz77y18z356lc68hcncbszawwqsldwhwc8dvb3rwn"; depends=[dirmult doParallel foreach ggplot2 gplots lattice MASS rpart rpart_plot vegan]; };
   HMPTrees = derive2 { name="HMPTrees"; version="1.4"; sha256="1jha64iyb0816rdg2i3z7i31z02r72k6acmvw0ibw3sli8zcvphb"; depends=[ape dirmult doParallel foreach HMP]; };
   HMR = derive2 { name="HMR"; version="0.4.2"; sha256="0rbpghih99avaq803f6hb66pfbqgzh1i2yaqs0mhbj61yyjzyb7b"; depends=[]; };
   HMVD = derive2 { name="HMVD"; version="1.0"; sha256="0agzvsl2n3zg3i519b93jqpiq9zix0bbrjdzk3ymsbb42dzkmj0d"; depends=[MASS]; };
   HPbayes = derive2 { name="HPbayes"; version="0.1"; sha256="1kpqnv7ymf95sgb0ik7npc4qfkzc1zb483vwnjpba4f42jhf508y"; depends=[boot corpcor MASS mvtnorm numDeriv]; };
-  HRM = derive2 { name="HRM"; version="0.7.4"; sha256="0q8g5s5n9442rnx3wkcpz054m3lwjiqaaik32n7x6a01igy13p66"; depends=[ggplot2 MASS matrixcalc plyr reshape2 xtable]; };
+  HRM = derive2 { name="HRM"; version="0.8.0"; sha256="0p6m73l6i9psa3xh2l02c6r2f2wiysn5nharyryz0p50rz7ajhls"; depends=[ggplot2 MASS matrixcalc plyr reshape2 xtable]; };
   HRQoL = derive2 { name="HRQoL"; version="1.0"; sha256="1gr9rhr8gdnh7bw2v3r0xc3yhmzrx2gzgsd8wd5mmsp81ph0h5lz"; depends=[car fmsb Matrix matrixcalc numDeriv RColorBrewer rootSolve]; };
   HSAR = derive2 { name="HSAR"; version="0.4.2"; sha256="0rxb2klmyynr8rzq6ka8p40lw81wjd0jkw2wg3vg90zny0zps98j"; depends=[Rcpp RcppArmadillo spdep]; };
   HSAUR = derive2 { name="HSAUR"; version="1.3-9"; sha256="0b2hyn59lr2pma87fcj7mli3qmrbnfhgd8fv02fa317rj52399qz"; depends=[]; };
   HSAUR2 = derive2 { name="HSAUR2"; version="1.1-17"; sha256="0jc554lz5lj7180vd4rbrjkywar4bh38c7i9kyxhd5clg4afxpw8"; depends=[]; };
   HSAUR3 = derive2 { name="HSAUR3"; version="1.0-8"; sha256="0s3m771l83psfwk6dqw2zf0vyvk5v2h730b5nwaky9xvgvp0mrms"; depends=[]; };
-  HSROC = derive2 { name="HSROC"; version="2.1.8"; sha256="056g6iygrddmpmg5nnilqrlw2xavmcc9q07z942vc2nivw06h346"; depends=[coda lattice MASS MCMCpack]; };
   HSSVD = derive2 { name="HSSVD"; version="1.2"; sha256="1k7ga397grl0r4p0ipjgw5xlafb2528rpww67bw7mmy01w87a1cc"; depends=[bcv]; };
   HTMLUtils = derive2 { name="HTMLUtils"; version="0.1.7"; sha256="05y505jazzahnd6jsp3plqz8hd75991hhhcpcdn8093rinb1f8l1"; depends=[R2HTML]; };
   HTSCluster = derive2 { name="HTSCluster"; version="2.0.8"; sha256="0wnbfh6hdx8692jilgmv8sys1zm6fqc6mim7vvjhyqlmpm8gm0kg"; depends=[capushe edgeR plotrix]; };
-  HTSSIP = derive2 { name="HTSSIP"; version="1.3.0"; sha256="1lfsqh2wj4k8vm53g9m6y1jh5nxs8a49zh8q63mjb12nr5w01pb8"; depends=[ape coenocliner DESeq2 dplyr ggplot2 igraph lazyeval magrittr phyloseq plyr stringr tidyr vegan]; };
+  HTSSIP = derive2 { name="HTSSIP"; version="1.3.2"; sha256="0y5xqpq55x1q4afs9qwn949y6f4f11fl9zxn2ffzv17zsia7b7xl"; depends=[ape coenocliner DESeq2 dplyr ggplot2 igraph lazyeval magrittr phyloseq plyr stringr tidyr vegan]; };
   HUM = derive2 { name="HUM"; version="1.0"; sha256="1bq74l88jvscmq9ihv5wn06w2wng073ybvqb2bdx2dmiqlpv6jw2"; depends=[gtools Rcpp rgl]; };
   HURDAT = derive2 { name="HURDAT"; version="0.1.0"; sha256="074c5spfsg4f3hg9f316wz72m2j3kvycl8hb4j7i7z62wswgi420"; depends=[dplyr lubridate magrittr purrr readr stringr tibble tidyr]; };
   HW_pval = derive2 { name="HW.pval"; version="1.0"; sha256="14nmyqw2d9cmn64789yc54fmiqanh6n1dizp7vj94h7b0jwq63yy"; depends=[]; };
@@ -1460,7 +1491,7 @@ in with self; {
   HapEstXXR = derive2 { name="HapEstXXR"; version="0.1-8"; sha256="00p8pziy8q6vki7brpd57c7ckc9zw41c90h47yp9vb3ndanfqavp"; depends=[survival]; };
   Haplin = derive2 { name="Haplin"; version="6.2.1"; sha256="13kix0skxk35zgwci1fwxkqm8bxbsxf5kid7qs88ib9pgix7qg41"; depends=[DatABEL GenABEL MASS mgcv snow SuppDists]; };
   HaploSim = derive2 { name="HaploSim"; version="1.8.4"; sha256="0794f76hc9qvjmay7c61cmzycqafljs0g0hliq9xfrw4f23gq3sa"; depends=[]; };
-  HardyWeinberg = derive2 { name="HardyWeinberg"; version="1.5.8"; sha256="0xbcchmzii0jv0ygr91n72r39j1axraxd2i607b56v4yd5d8sy4k"; depends=[mice Rcpp]; };
+  HardyWeinberg = derive2 { name="HardyWeinberg"; version="1.5.9"; sha256="0qk3lly5qczn61rj0q9xzscppspvk238yjgr4p71pkzkjhiv40jz"; depends=[mice Rcpp Rsolnp]; };
   HarmonicRegression = derive2 { name="HarmonicRegression"; version="1.0"; sha256="0inz3l610wl0ibqjyrhfbmwmcfzcmcfhixai4lpkbfsyx93z2i4d"; depends=[]; };
   Harvest_Tree = derive2 { name="Harvest.Tree"; version="1.1"; sha256="021zmppy7p2iakaxirfjdb5jzakg1ijma9d25ly2ni0nx0p1mh6z"; depends=[rpart]; };
   HelpersMG = derive2 { name="HelpersMG"; version="3.0.0"; sha256="1y5q4z9yxap16bkcjsybm2754wm0x31hfqdnp2bb4gbvhz1jhas6"; depends=[coda]; };
@@ -1476,11 +1507,11 @@ in with self; {
   HiddenMarkov = derive2 { name="HiddenMarkov"; version="1.8-11"; sha256="1yh85pdb9r90qxcl5gxslyplxzrx8knrrsl2q65l57zfkqj185ja"; depends=[]; };
   HierO = derive2 { name="HierO"; version="0.2"; sha256="1lqj5grjly4kzxl7wb192aagz2kdvpnjdan2kcg5yxwvg1xcvwv1"; depends=[bitops RCurl rneos tcltk2 XML]; };
   HighDimOut = derive2 { name="HighDimOut"; version="1.0.0"; sha256="0r7mazwq4fsz547d3nyavmqya7144lg3fkl5f7amrp48l9h85vx2"; depends=[DMwR FNN foreach ggplot2 plyr proxy]; };
-  HistDAWass = derive2 { name="HistDAWass"; version="0.1.8"; sha256="1a87aimh5d7qp7j0hn2zgbcd7fk26sy79a4bq84q14zbc1gbsady"; depends=[class FactoMineR ggplot2 histogram Rcpp RcppArmadillo]; };
+  HistDAWass = derive2 { name="HistDAWass"; version="1.0.0"; sha256="0si57vmgnkrhyilk3vv4189c093n6if6i5nv3jylvhpmbf5nvm7p"; depends=[class FactoMineR ggplot2 ggridges histogram Rcpp RcppArmadillo]; };
   HistData = derive2 { name="HistData"; version="0.8-2"; sha256="0qd3a1v3xg39nwqfw63k6210vqkpknq0j3r36sy1910hn0nr83fa"; depends=[]; };
   HistogramTools = derive2 { name="HistogramTools"; version="0.3.2"; sha256="1wkv6ypn006d8j6bpbhc1knw0bky4y8r7jp87482yd19q5ljsgv0"; depends=[ash Hmisc stringr]; };
   HiveR = derive2 { name="HiveR"; version="0.3.42"; sha256="09h061511pk7iy1k9gb3ifa5q6gd17ix9sn2fshl6gp5sxnysn4f"; depends=[jpeg plyr png RColorBrewer rgl tkrgl]; };
-  Hmisc = derive2 { name="Hmisc"; version="4.0-3"; sha256="1a7i7azag6pldgala85d8hh7wnx1shamyiriy4jfc65nxrr2lq8w"; depends=[acepack base64enc cluster data_table foreign Formula ggplot2 gridExtra gtable htmlTable htmltools lattice latticeExtra nnet rpart survival viridis]; };
+  Hmisc = derive2 { name="Hmisc"; version="4.1-1"; sha256="160l50ppjs69ipcaya1mlcz29zbn5rmqg91r09dvzzvkvwfb47cr"; depends=[acepack base64enc cluster data_table foreign Formula ggplot2 gridExtra gtable htmlTable htmltools lattice latticeExtra nnet rpart survival viridis]; };
   HoRM = derive2 { name="HoRM"; version="0.1.1"; sha256="0l0gcp1bagm7zbjg7hw2748aqjn9592531d0w5vjap0jgalaig32"; depends=[ggplot2 MASS orthopolynom quantmod rsm]; };
   Holidays = derive2 { name="Holidays"; version="1.0-7"; sha256="1srfbhlrf0pd6gzhp4hbic555lb7camk084rn1qz2g7fjvyijqiq"; depends=[TimeWarp]; };
   Homeric = derive2 { name="Homeric"; version="0.1-3"; sha256="1vcs8fj39zpz45p7gph0mnx65hgr35na0b79i8llyw7i1h7zqzxr"; depends=[]; };
@@ -1490,15 +1521,16 @@ in with self; {
   HyPhy = derive2 { name="HyPhy"; version="1.0"; sha256="0994ymv7sswbp8qw3pay34s926cflw2hq2gnchw7rknybvlsrinq"; depends=[ape R_utils]; };
   HybridFS = derive2 { name="HybridFS"; version="0.1.2"; sha256="05skml3v2zm5hmd6slpmx3lfwi6x5wfgbx7cnhc6l077b11jpdd9"; depends=[caTools FSelector InformationValue ROCR woeBinning]; };
   HybridMC = derive2 { name="HybridMC"; version="0.2"; sha256="1wgzfyk0scwq9s2sdmc91fj7r4d7zlgwgnj6mdiia8w88ja8kzqy"; depends=[coda]; };
-  HydeNet = derive2 { name="HydeNet"; version="0.10.5"; sha256="00h7lj347nag5m5nfyv1hgaml77kqlcxrl704mq6791fcjdchgp1"; depends=[checkmate DiagrammeR dplyr graph gRbase magrittr nnet pixiedust plyr rjags stringr]; };
+  HydeNet = derive2 { name="HydeNet"; version="0.10.7"; sha256="001ifh5ddg7q4rckhi662zd9a8milfi3v2gmgy76x0wq2xph7yrj"; depends=[checkmate DiagrammeR dplyr graph gRbase magrittr nnet pixiedust plyr rjags stringr]; };
   HydroMe = derive2 { name="HydroMe"; version="2.0"; sha256="1a1d3lay94mzwk8n22l650h3p133npdf4aj63zgrdw4760p54rqf"; depends=[minpack_lm nlme]; };
   HyperbolicDist = derive2 { name="HyperbolicDist"; version="0.6-2"; sha256="1wgqbx9ascyk6gw1dmvfz6hljvbh49gb9shr9qgf22qbq83waiva"; depends=[]; };
   IAPWS95 = derive2 { name="IAPWS95"; version="1.0.0"; sha256="1rw6i3a653m11fyza42jhbqi6607fiqgmq15qfn5bqhq8sdgmn9p"; depends=[ggplot2 pander Rcpp]; };
   IASD = derive2 { name="IASD"; version="1.1"; sha256="1slhd42k639mbyxccl7n69p7ng2qx6pqag8wz3kdwn479spkavzn"; depends=[]; };
   IAT = derive2 { name="IAT"; version="0.3"; sha256="110rn2q09gspfd4msyh30dllxdxdraffkr18h1nm72brzhmx9cfi"; depends=[dplyr ggplot2 lazyeval]; };
-  IATScore = derive2 { name="IATScore"; version="0.1.0"; sha256="1dlqazsg4vvflrqls1scmq3f6840d3dsplglfj3x0i8fh87q9ja0"; depends=[]; };
-  IATscores = derive2 { name="IATscores"; version="0.1-2"; sha256="0grl5m4ccwaxvhg1bziy3vv5jffkvr24z268ws5m4ia20haif0dm"; depends=[dplyr nem qgraph reshape2 stringr]; };
+  IATScore = derive2 { name="IATScore"; version="0.1.1"; sha256="0sg4apj1sp0xc311cbkvflhv9kw1jxvjhdr0xjw79s662mnhkhgz"; depends=[]; };
+  IATscores = derive2 { name="IATscores"; version="0.2.1"; sha256="1nm07wlrnjx36wr3jbv2faayh1vrlfid124b27w9v0x0dk145i82"; depends=[dplyr qgraph reshape2 stringr]; };
   IAbin = derive2 { name="IAbin"; version="1.0"; sha256="1cpj2mx72n4v0yd8jbbnhj2w5d0sc8pw7rc8ahnn1hfa38pwwsyx"; depends=[]; };
+  IBCF_MTME = derive2 { name="IBCF.MTME"; version="1.1-2"; sha256="1vb8i1xck65135pnlqbyh6y2a5w9n7spvxzyzb7323x1mv161157"; depends=[lsa tidyr]; };
   IBDLabels = derive2 { name="IBDLabels"; version="1.1"; sha256="1m9fd058yjxva6hin7i72i2nl285wfm0jkdn5xcng27yqlijyrm9"; depends=[]; };
   IBDhaploRtools = derive2 { name="IBDhaploRtools"; version="1.8"; sha256="1754239pdil6b383mpzyi8zb9l9hzg15dwgn5246v97g1y3mlp5r"; depends=[]; };
   IBDsim = derive2 { name="IBDsim"; version="0.9-7"; sha256="1wq0w9d4kwvq1hc5l0m8wrqfhnncapmnrh29x9vvafv50ym7yb3l"; depends=[paramlink]; };
@@ -1506,7 +1538,7 @@ in with self; {
   IBrokers = derive2 { name="IBrokers"; version="0.9-12"; sha256="0mhh4kgwrncrcysvnvah6xc7fhx5ywjzn258cs9xj9kzns0jblk6"; depends=[xts zoo]; };
   IC2 = derive2 { name="IC2"; version="1.0-1"; sha256="03jjb62msxjxdg9l3zd1ns0d2w37hkxy5pnjgaywxw3vfk4zwfj9"; depends=[]; };
   ICAFF = derive2 { name="ICAFF"; version="1.0.1"; sha256="0zazx4nv81s75appg10aayks04mx6m5n9yf5hqrbxh3yj68vzxfy"; depends=[]; };
-  ICAOD = derive2 { name="ICAOD"; version="0.9.2"; sha256="12fkcc2ii3652n8ihzm29f9gip790wdmil7c1bzd5ma4l959w7hy"; depends=[nloptr Rcpp RcppEigen Rsolnp]; };
+  ICAOD = derive2 { name="ICAOD"; version="0.9.6"; sha256="1c9zlskhsz5w1a5lkfcxclnsgxbvkgcgnbzvc3xk1mpa2zb2pvap"; depends=[cubature mnormt nloptr Rcpp RcppEigen sn]; };
   ICBayes = derive2 { name="ICBayes"; version="1.1"; sha256="1bmxba3bv9szzxvjf1blwxwdhw87h7s04cfn63c1gqpnpwsmr03y"; depends=[coda HI survival]; };
   ICC = derive2 { name="ICC"; version="2.3.0"; sha256="0y8zh9715cp9bglxpygqwgigrarq37sj845lk1xl0ydwinl0a6kk"; depends=[]; };
   ICC_Sample_Size = derive2 { name="ICC.Sample.Size"; version="1.0"; sha256="1w6v1jp8bfvf6c49ikswkc5527gdx5cyqnw95x00pgmm6riwlsp9"; depends=[]; };
@@ -1519,9 +1551,10 @@ in with self; {
   ICRanks = derive2 { name="ICRanks"; version="1.3"; sha256="0n8gyqlwx38v2lfx7r49h43k2f4z4ml78x3lq0sc952n4rckzgiv"; depends=[multcomp Rcpp]; };
   ICS = derive2 { name="ICS"; version="1.3-0"; sha256="0r5lf8km77h29lcpi7z0hkmy4vh0p5m7p2xbxsxj6w9hsgyanv72"; depends=[mvtnorm survey]; };
   ICSNP = derive2 { name="ICSNP"; version="1.1-0"; sha256="1g7n8jlilg36hm989s5x18kf8jqn5wy98xi9jmnqkqpds4ff217y"; depends=[ICS mvtnorm]; };
-  ICSOutlier = derive2 { name="ICSOutlier"; version="0.2-0"; sha256="1dxbh3qhirr7f2bv68g1xlya5fprm230fdgxhccrzdc0wh0ijh3i"; depends=[ICS moments mvtnorm]; };
+  ICSOutlier = derive2 { name="ICSOutlier"; version="0.3-0"; sha256="1vj1y4zw8pkghkg4qnmx0yk1yw4zzl9075n5czrna9ckk2p29fmh"; depends=[ICS moments mvtnorm]; };
   ICSShiny = derive2 { name="ICSShiny"; version="0.4"; sha256="02qcph5ax4gwz44zq8riv4yl4h0wdiwgxv7m96cpdh7gwfhwzgzr"; depends=[DT ICS ICSNP ICSOutlier rrcov shiny simsalapar]; };
   ICV = derive2 { name="ICV"; version="1.0"; sha256="1na87i39jy5d8ibldqcqz3a072ihkgcl0k629sxch9hk6v6j5lly"; depends=[]; };
+  ICcalib = derive2 { name="ICcalib"; version="1.0.7"; sha256="1p224srs1jakl7iyybcn9f6r9kcwxyrikdrfa9wjgkhz60pv88fs"; depends=[fitdistrplus icenReg ICsurv MASS msm numDeriv Rcpp RcppArmadillo survival]; };
   ICsurv = derive2 { name="ICsurv"; version="1.0"; sha256="1mbndpy3x5731c9y955wscy76jrxlgv33bf6ldqp65cwyvdgxl86"; depends=[MASS matrixcalc]; };
   ICtest = derive2 { name="ICtest"; version="0.3"; sha256="0g4h6gkz6zp28a1hvrvm89wckx6sg5fqzy0flb97a6lh9xpmb83g"; depends=[GGally ggplot2 ICS ICSNP JADE png Rcpp RcppArmadillo survey]; };
   IDCard = derive2 { name="IDCard"; version="0.3.0"; sha256="06b5zqmgh4clni3mv6ab2a52r4z34isbz0hd1i61793gps9fkc0y"; depends=[stringr]; };
@@ -1547,30 +1580,31 @@ in with self; {
   IMak = derive2 { name="IMak"; version="1.1.2"; sha256="19si4hhvi8kddkp2kr1yw2bcw1qkk0i42saklvwk751gdmyzl9p3"; depends=[]; };
   INCATome = derive2 { name="INCATome"; version="1.0"; sha256="1gbmcirs49ydmk5rg2vl5gdy39dfx9psw5mijibzjszcfjar3kqs"; depends=[genefilter limma multtest RankProd siggenes]; };
   INLABMA = derive2 { name="INLABMA"; version="0.1-8"; sha256="13r89r14xpihfqddwzkhxg4jgxyl59826x2insrall3mj2yffj90"; depends=[Matrix sp spdep]; };
-  INLAutils = derive2 { name="INLAutils"; version="0.0.4"; sha256="0bfqczwqyfdy343n3pa6pzard9wqzl382p1z42q6vclgx6h0h7rc"; depends=[assertthat ggfortify ggplot2 raster RColorBrewer reshape2 sp]; };
   INSPIRE = derive2 { name="INSPIRE"; version="1.5"; sha256="0938l50yxnb5q628mp874ayx9ybvcjddis20y1hzm5cmlsg0hqhg"; depends=[missMDA]; };
   IPEC = derive2 { name="IPEC"; version="0.0.9"; sha256="02nzh8yq6nshnljxlkqyvd9spnqbcxfdlcr2zl33syhgqjsaz34h"; depends=[MASS numDeriv]; };
   IPMRF = derive2 { name="IPMRF"; version="1.2"; sha256="1zvwwhiy0p134zvm5ldc92pdd1ap72bhbrlf02rz9m2hlsxmwy67"; depends=[gbm party randomForest]; };
   IPMpack = derive2 { name="IPMpack"; version="2.1"; sha256="08b79g5a9maxnxladvc2x2dgcmm427i8p6hhgda3mw2h5qmch2q3"; depends=[MASS Matrix nlme]; };
-  IPSUR = derive2 { name="IPSUR"; version="1.5"; sha256="0brh3dx7m1rilvr1ig6vbi7p13bfbblgvs8fc114f08d90fczwnq"; depends=[]; };
   IPWsurvival = derive2 { name="IPWsurvival"; version="0.5"; sha256="0lmw0ifj8cds8lzyjkkv0i0zim23p0a3pawlhmhdm3nfvwawb853"; depends=[survival]; };
   IPtoCountry = derive2 { name="IPtoCountry"; version="0.0.1"; sha256="1b10z93mc31cr1c5wxp9xz9cr3jm4n4g5kav09dyallpgw60rskp"; depends=[data_table devtools dtables ggplot2 install_load maps scales]; };
   IQCC = derive2 { name="IQCC"; version="0.7"; sha256="1zalpmyywkrnci0jd8irakjhiqmr52zhj1sbxf9pz5c7wks2rdbc"; depends=[MASS miscTools qcc]; };
   IRATER = derive2 { name="IRATER"; version="0.0.1"; sha256="0jxdvjmnmangbqy3ibb5qrj9jz3wrzs0wa1r2gjk4v8vsbk0ipcf"; depends=[coda lattice plyr R2admb]; };
   IRISMustangMetrics = derive2 { name="IRISMustangMetrics"; version="2.0.8"; sha256="0imsssija6v91il3dw5ibzm09xyjbabp2xy9jp4ixj6x8295i5xg"; depends=[dplyr IRISSeismic pracma RCurl seismicRoll signal stringr XML]; };
   IRISSeismic = derive2 { name="IRISSeismic"; version="1.4.6"; sha256="1kccc4rbnyczdif7plvl3jfa3nfqfasybbbqmdkfiz0mhgvn1z4r"; depends=[pracma RCurl seismicRoll signal stringr XML]; };
+  IROmiss = derive2 { name="IROmiss"; version="1.0.1"; sha256="01l08s1g7h8cki372daa61pw3wac3pbv5d4yqnphg5p8ihsmrc5d"; depends=[equSA huge mvtnorm ncvreg]; };
   IRTShiny = derive2 { name="IRTShiny"; version="1.2"; sha256="094ax94y6k5z4vlxfla2w19f57q0z32nwwd5npjbgmnkhvfhhl9v"; depends=[beeswarm CTT ltm psych shiny shinyAce]; };
   IRTpp = derive2 { name="IRTpp"; version="0.2.6.1"; sha256="10shzyiawk65pikawvhg58kx6fpvs1dazqmfjf3rfvly1lc0px1q"; depends=[FactoMineR MASS mvtnorm numDeriv Rcpp]; };
   IRdisplay = derive2 { name="IRdisplay"; version="0.4.4"; sha256="19l4flvik8zw2pany8dpjbrh0bji6bag6pmclgwqnq80532hnfp8"; depends=[repr]; };
   ISBF = derive2 { name="ISBF"; version="0.2.1"; sha256="12mk4d0m5rk4m5bskkkng5j6a9dzh8l1d74wh8lnamq7kf9ai9if"; depends=[]; };
   ISDA_R = derive2 { name="ISDA.R"; version="1.0"; sha256="0w6p2iy6s7fy8pw2cf4b5zhqcgjjwd5bkax1aqflaaj4ppmfx64v"; depends=[scatterplot3d]; };
   ISLR = derive2 { name="ISLR"; version="1.2"; sha256="1bfay6cs40crhh34v2ksn4zdxivimfyjvk19wqbnjr7vs837l3xh"; depends=[]; };
+  ISM = derive2 { name="ISM"; version="0.1.0"; sha256="0by0w6zgnwcwzbmxx16s8mb1avhc6aiavqp0qkxx6hr70vrgb997"; depends=[rJava xlsx xlsxjars]; };
   ISOcodes = derive2 { name="ISOcodes"; version="2017.09.27"; sha256="1nnbp110fzlckbi6vdigrn275d3j7ixys0b8np8ran876piwddjp"; depends=[]; };
-  ISOpureR = derive2 { name="ISOpureR"; version="1.1.0"; sha256="1y2y7qclhzn31809fabhqzsc0rxpd6k44kzsg2rc79xkvqf57pgj"; depends=[futile_logger Rcpp RcppEigen]; };
+  ISOpureR = derive2 { name="ISOpureR"; version="1.1.1"; sha256="1mi0hl32wfgc7znvs1ay9i9lwdj022d88asdgcbs63vx335qg99w"; depends=[futile_logger Rcpp RcppEigen]; };
   ISOweek = derive2 { name="ISOweek"; version="0.6-2"; sha256="1f1h8pgjaa14cvaj8ldl87b4vslxwvyfj46m0hkylwp73sv3g2mm"; depends=[stringr]; };
   ISR3 = derive2 { name="ISR3"; version="0.98"; sha256="0mmpdl9ndlj9i0k3zl7ja0g7y9pm67igw925ld5qnz7a36plygxs"; depends=[]; };
   ISwR = derive2 { name="ISwR"; version="2.0-7"; sha256="1rd1wrvl8wlc8ya5lndk74gnfvj9wp29z8617v3kbf32gqhby7ng"; depends=[]; };
   ITGM = derive2 { name="ITGM"; version="0.6"; sha256="0acrm15vb1r0nnp0bp5zf8g27i3sy3d7bpd50lj0w1rl6dgwfznh"; depends=[data_table Fgmutils ggplot2 gsubfn plyr randomcoloR rbokeh sqldf]; };
+  ITNr = derive2 { name="ITNr"; version="0.1.0"; sha256="0fxh7qs96w945sp7gnjk069rp1j8bj949r9c2skabw8bnkf5yi1k"; depends=[animation blockmodeling circlize cowplot dplyr fastmatch GGally ggplot2 GoodmanKruskal igraph intergraph Matrix ndtv network networkDynamic plyr RColorBrewer reshape2 sna statnet tnet WDI xergm xergm_common]; };
   IUPS = derive2 { name="IUPS"; version="1.0"; sha256="01pv03ink668fi2vxqybli0kgva13gxhqfdxkwz6qk5rnpzwvf5w"; depends=[boot Matching R2jags]; };
   IalsaSynthesis = derive2 { name="IalsaSynthesis"; version="0.1.6"; sha256="15iwywvzhgiyigl8f488b7ra89rz0a7ymfsdgdlqfls3fmld7b4a"; depends=[testit]; };
   Iboot = derive2 { name="Iboot"; version="0.1-1"; sha256="1fahh86kgv2axj2qg14n87v888sc0kb567s6zr3fh5zv361phwkq"; depends=[]; };
@@ -1583,11 +1617,12 @@ in with self; {
   ImputeRobust = derive2 { name="ImputeRobust"; version="1.2"; sha256="0hr5payxqyk5nckwx84j5wqrj477219qbp76908aylwb7c7iw9n4"; depends=[extremevalues gamlss gamlss_dist lattice mice purrr]; };
   InPosition = derive2 { name="InPosition"; version="0.12.7"; sha256="1f7xb2kxikmja4cq7s1aiwhdq27zc6hghjbliqqpm8ci8860lb8p"; depends=[ExPosition prettyGraphs]; };
   InSilicoVA = derive2 { name="InSilicoVA"; version="1.1.5"; sha256="15r3pdbwgnvk1qaqvb3m2xiczlv5jr7j7iwdgrxsn8n09q0aa4ds"; depends=[coda ggplot2 rJava]; };
-  IncDTW = derive2 { name="IncDTW"; version="1.0.0"; sha256="0q5xfwlhraip7x1h8z4slkqndf2d73drhzc9q4kgqx3j03yb3n8c"; depends=[ggplot2 Rcpp scales]; };
+  IncDTW = derive2 { name="IncDTW"; version="1.0.1"; sha256="0ycr46l1h1zxrw5kszfgl3w1f9law539fi7j1i3fb2s59n5kh2k5"; depends=[ggplot2 Rcpp scales]; };
   IncucyteDRC = derive2 { name="IncucyteDRC"; version="0.5.4"; sha256="1k7jqcyx5n4my5rbyfa693ganbk91xganyagq8x8szli9h1491ii"; depends=[cowplot dplyr drc DT ggplot2 magrittr shiny tidyr XML]; };
   IndTestPP = derive2 { name="IndTestPP"; version="1.0"; sha256="1ywl35k2syv46pz6ap5sjkynapqj04aq197czspqky0pvrq7ldr1"; depends=[]; };
   IndepTest = derive2 { name="IndepTest"; version="0.1.0"; sha256="0l9vfp34k4nhlg3nymj0gqkpjblzbbvnz0zcajvq4c8nw9968c5i"; depends=[FNN mvtnorm Rdpack]; };
   IndependenceTests = derive2 { name="IndependenceTests"; version="0.2"; sha256="04qfh2mg9xkfnvp6k7w1ip4rb663p3pzww9lyprcjvr3hcac7gqa"; depends=[xtable]; };
+  IndexNumR = derive2 { name="IndexNumR"; version="0.1.0"; sha256="1385j7a1hz8i5g00x1p1rd32gq243w2zrzvk781zjqdq7az33fsw"; depends=[]; };
   IndianTaxCalc = derive2 { name="IndianTaxCalc"; version="1.0.2"; sha256="1fxw884wj9n8drk2xz3rgr4f7b4fckh5firrf5gdz6d1nk9hdvc1"; depends=[]; };
   InfDim = derive2 { name="InfDim"; version="1.0"; sha256="0rh3ch0m015xjkxy08vf9pc6q7azjc6sgicd2j6cwh611pqq39wq"; depends=[]; };
   InferenceSMR = derive2 { name="InferenceSMR"; version="1.0"; sha256="13d3v8kyk6br33659jgql6j1nqmnd8zszqrwfw2x3khkiqzgdmhk"; depends=[survival]; };
@@ -1616,7 +1651,7 @@ in with self; {
   InterpretMSSpectrum = derive2 { name="InterpretMSSpectrum"; version="1.1"; sha256="00nhfz1hs2j1pqhwgw5c337kl1azr3vmlcd1krnl4fgs5yz6ksyq"; depends=[DBI doParallel enviPat foreach plyr Rdisop RSQLite]; };
   InvariantCausalPrediction = derive2 { name="InvariantCausalPrediction"; version="0.7-1"; sha256="1pz06l50fm8327n1v8wnvh8q51g97crb4c07si3hywd5y1hkiwkp"; depends=[glmnet linprog mboost RColorBrewer]; };
   InvasionCorrection = derive2 { name="InvasionCorrection"; version="0.1"; sha256="1wwx2kssjysl1lraac36pvxq34vg8qm0vwi861rs1iipfc35i84j"; depends=[lattice]; };
-  Inventorymodel = derive2 { name="Inventorymodel"; version="1.0.5"; sha256="16aqc8202k84pwbss6g2cw7lvykjjjfdg62jg9r82skjf7zzprpg"; depends=[e1071 GameTheoryAllocation]; };
+  Inventorymodel = derive2 { name="Inventorymodel"; version="1.1.0"; sha256="1l87xghdksgmb2k3a8j382p7ffi2pma38a6pn31sfjsa6bgmrdnk"; depends=[e1071 GameTheoryAllocation]; };
   IrishDirectorates = derive2 { name="IrishDirectorates"; version="0.2.0"; sha256="1m3c3dj4729chk1n3k7awvi1jdfnds2w36vm268azg53j6c7l4b6"; depends=[]; };
   IsingFit = derive2 { name="IsingFit"; version="0.3.1"; sha256="1prdzzp15klkdy72379bjksdgxr15nk16pqm35w95341cddxchc7"; depends=[glmnet Matrix qgraph]; };
   IsingSampler = derive2 { name="IsingSampler"; version="0.2"; sha256="16vwb5pcqjvvsk9wsgj10mzhgh72iz1q6n8nmkva6y1l7xv54c8w"; depends=[magrittr nnet plyr Rcpp]; };
@@ -1631,12 +1666,13 @@ in with self; {
   JAGUAR = derive2 { name="JAGUAR"; version="3.0.1"; sha256="0lyc8biwj9yir1i06klp2jkb31mnzwp226aw7pwabkprfhqgfmqd"; depends=[lme4 plyr Rcpp RcppArmadillo RcppProgress reshape2]; };
   JASPAR = derive2 { name="JASPAR"; version="0.0.1"; sha256="0wiyn7cz45hwy9zkvacx28zdrg78q6715cg4r9xgcb39q25s0dcy"; depends=[gtools]; };
   JBTools = derive2 { name="JBTools"; version="0.7.2.9"; sha256="0bynqn3daqgmi3l9asy34mfwyfjkn35k465dfqqi3xwx6cbzlg5k"; depends=[colorspace foreach gplots plotrix]; };
+  JFE = derive2 { name="JFE"; version="1.0"; sha256="18hp457m0ylk19rj3kamb1j8nn09i6i8ybk4hma7gaahy4vp9vy2"; depends=[BurStFin fAssets fBasics fPortfolio iClick MASS PerformanceAnalytics quantmod tcltk2 timeDate timeSeries xts zoo]; };
   JGEE = derive2 { name="JGEE"; version="1.1"; sha256="078348n623hlyc3n9yh67vv5acsnxapmbwybvrb1i7kawmqw5msi"; depends=[gee MASS]; };
   JGL = derive2 { name="JGL"; version="2.3"; sha256="1351iq547ln06nklrgx192dqlfnn03hkwj3hrliqzfbmsls098qc"; depends=[igraph]; };
   JGR = derive2 { name="JGR"; version="1.8-4"; sha256="0zfjfqlfrsz4wjdq78zasvgd3ldgcx20h16bbar1l7wv843j71ym"; depends=[JavaGD rJava]; };
   JM = derive2 { name="JM"; version="1.4-7"; sha256="1ajdmabifzg4jp74ghas5wf3vp4x2vnc6sh811n44a1ni727sb2n"; depends=[MASS nlme survival]; };
   JMbayes = derive2 { name="JMbayes"; version="0.8-70"; sha256="1xvzyy2h3p30wxvgrm6d4dmxwiqs4l7dafpanlnykgih9wmh7xsf"; depends=[doParallel foreach Hmisc jagsUI MASS nlme Rcpp RcppArmadillo rstan shiny survival xtable]; };
-  JMcmprsk = derive2 { name="JMcmprsk"; version="0.9"; sha256="1y3s42yi7adbi8b9vz4m0inb4gkdqma4n73f6nabmhb57ybf3l2y"; depends=[MASS Rcpp]; };
+  JMcmprsk = derive2 { name="JMcmprsk"; version="0.9.3"; sha256="0bjaiygn2sq40f2cwa1c6j73748j2cx5q69pd4jgfgbpm9r25r4f"; depends=[MASS Rcpp]; };
   JMdesign = derive2 { name="JMdesign"; version="1.1"; sha256="0w5nzhp82g0k7j5704fif16sf95rpckd76jjz9fbd71pp2d80vlh"; depends=[]; };
   JOP = derive2 { name="JOP"; version="3.6"; sha256="1kpb1dy2vm4jgzd3h0qgdw53nfp2qi74hgq5l5inxx4aayncclk7"; depends=[dglm Rsolnp]; };
   JOUSBoost = derive2 { name="JOUSBoost"; version="2.1.0"; sha256="0f3rr7aw20nvmlpqrq3wzgmr55lqdqhk3wphpqq7msgvaf1zrcl7"; depends=[doParallel foreach Rcpp rpart]; };
@@ -1645,9 +1681,8 @@ in with self; {
   JRF = derive2 { name="JRF"; version="0.1-4"; sha256="1xpvscn9iawwa0vfh3kfwzdni436bf42nvm18b8abh033ljvqpij"; depends=[]; };
   JSM = derive2 { name="JSM"; version="0.1.2"; sha256="18h3jhfg5ch9312aidpbs0fz5rd54alv4kjhvkchddhp3alyhp82"; depends=[nlme Rcpp RcppEigen statmod survival]; };
   JWileymisc = derive2 { name="JWileymisc"; version="0.2.1"; sha256="0cli204f1b5hj3qz62fycww12a6dv7xxxszkxgrxirw6mpdf858c"; depends=[cowplot data_table devtools foreach ggplot2 Hmisc lavaan MASS mgcv mice multcompView plyr]; };
-  JacobiEigen = derive2 { name="JacobiEigen"; version="0.2-2"; sha256="1q6wqxlhslip14544px1aq446m77a8s0chvhpc19im014w4g930v"; depends=[Rcpp]; };
   JavaGD = derive2 { name="JavaGD"; version="0.6-1"; sha256="13n6xzbbjgd0bpwv2xgm3dlscg87wh32q6fcq50kk6byp6yv05sc"; depends=[]; };
-  Jdmbs = derive2 { name="Jdmbs"; version="1.0"; sha256="1mhr1z6427lcm018pmllmhhsbnxa7cbmp9a5bjxb5n2zy1j71623"; depends=[igraph rmarkdown]; };
+  Jdmbs = derive2 { name="Jdmbs"; version="1.1"; sha256="06af66128vfcf28fylaz7qqzqrpn6s9hz89pd5jwpr32wxc5vwcg"; depends=[igraph png rmarkdown]; };
   Jmisc = derive2 { name="Jmisc"; version="0.3.1"; sha256="1szn29dng54l2xmrm6pg3d5rmwdc1ks23vsnsmplnr5rx7yj002s"; depends=[]; };
   JoSAE = derive2 { name="JoSAE"; version="0.2.3"; sha256="0b1jwplds5b7z15v6bvqj1rbn7zxpgvh2ykhqplxzv4mlaw6i0li"; depends=[nlme]; };
   Johnson = derive2 { name="Johnson"; version="1.4"; sha256="12ajcfz5mwxvimv8nq683a2x3590gz0gnyviviyzf5x066a4q0lj"; depends=[]; };
@@ -1656,11 +1691,11 @@ in with self; {
   Julia = derive2 { name="Julia"; version="1.1"; sha256="0i1n150d89pkds7qyr0xycz6h07zikb2y07d5fcpaqs4446a8prg"; depends=[]; };
   JuliaCall = derive2 { name="JuliaCall"; version="0.11.1"; sha256="0i2kvqys7gwabvxk5p2n6n6fpbmbwqkli1p7lqmnkfxvm4x2ayyf"; depends=[inline R6]; };
   JumpTest = derive2 { name="JumpTest"; version="0.0.1"; sha256="1d5zmjwmajzdg5d1ws40zchx9wiaav01fby1v3irym2mx30jgbqn"; depends=[MASS Rcpp RcppEigen]; };
+  JuniperKernel = derive2 { name="JuniperKernel"; version="1.2.3.0"; sha256="17r4ssjjayvnp9fp9jalklp3p8dadyx5hvi9z3bh3sw4b7kx4lyd"; depends=[data_table gdtools jsonlite pbdZMQ Rcpp repr]; };
   KANT = derive2 { name="KANT"; version="2.0"; sha256="169j72pmdkcj6hv8qgmc02aps0ppvvl1vnr1hzrb1gsf7zj7bs3y"; depends=[affy Biobase]; };
-  KATforDCEMRI = derive2 { name="KATforDCEMRI"; version="0.740"; sha256="1k8fihd9m26k14rvc5d5x0d9xc3mh8d49hs64p55np1acqfhg2sy"; depends=[locfit matlab R_matlab]; };
   KENDL = derive2 { name="KENDL"; version="1.1"; sha256="05vsh3x0li964a485q3n19c7fahcprvg1bnrvffagkxf8w1iz153"; depends=[]; };
   KERE = derive2 { name="KERE"; version="1.0.0"; sha256="1b16cb3ihcsp9jffmd45sd7ia4pibikmj62ad344wmq22q4fpliy"; depends=[]; };
-  KFAS = derive2 { name="KFAS"; version="1.2.9"; sha256="04iq4zyy98rqvv7q4f3ypg0bmdawmwa3lwm9agbrsaiz8v89cqhk"; depends=[]; };
+  KFAS = derive2 { name="KFAS"; version="1.3.1"; sha256="0hnf9ljy19hng7cvr0qixcf8h9z2spp5c9512gfm9c7zn6802k54"; depends=[]; };
   KFKSDS = derive2 { name="KFKSDS"; version="1.6"; sha256="1g11f936p554bfxlm4slxhfxki5vqkks1mrbqw4w83v2rcb50f8d"; depends=[]; };
   KGode = derive2 { name="KGode"; version="1.0.0"; sha256="0ikcx43kw83ppbjdm6syhmx5fs5jsr4hyhjvilgqkyr0kx1h6wag"; depends=[mvtnorm pracma pspline R6]; };
   KMDA = derive2 { name="KMDA"; version="1.0"; sha256="0x4kjjdd59wvgg699vrj99wqg3s1qbkbskis1c34xv9b8bzcv94j"; depends=[]; };
@@ -1668,24 +1703,25 @@ in with self; {
   KMsurv = derive2 { name="KMsurv"; version="0.1-5"; sha256="0hi5vvk584rl70gbrr75w9hc775xmbxnaig0dd6hlpi4071pnqjm"; depends=[]; };
   KODAMA = derive2 { name="KODAMA"; version="1.4"; sha256="0qzpgj6ljzd8n8vgmf53pmblsmypl86j7njd3pz0d370bxfchsqj"; depends=[Rcpp RcppArmadillo]; };
   KOGMWU = derive2 { name="KOGMWU"; version="1.1"; sha256="0n07wrpmmvxflxpmhkp3gm40xz2w4j0l8dsljhmfiyxcf5y7kq2g"; depends=[pheatmap]; };
+  KRIG = derive2 { name="KRIG"; version="0.1.0"; sha256="1hpmjzzrh5b042xh14dgxvn5x5ini63vq5jz1i6rjgvsdf734f98"; depends=[Rcpp RcppArmadillo Rdpack]; };
   KRLS = derive2 { name="KRLS"; version="1.0-0"; sha256="1zyf3smfzfm3n43i35rlj1w6vcip2hxkvk4f8lp77xbsry0gmwjw"; depends=[]; };
   KRMM = derive2 { name="KRMM"; version="1.0"; sha256="0wxzhrrc4lx20nxjny7rcfw3bya7drn88zbrlzx9f531298xwbrk"; depends=[cvTools kernlab MASS robustbase]; };
   KSD = derive2 { name="KSD"; version="1.0.0"; sha256="0wqmbr51yv7f87pnhph2nrj9y2d5jql2agizcaq6lax23lj6xfb7"; depends=[pryr]; };
   KSEAapp = derive2 { name="KSEAapp"; version="0.99.0"; sha256="1gfgpa2d32y6bzvf4ww70sm7niq34sqmyrhi0phlqxshqq9xviqc"; depends=[gplots]; };
   KScorrect = derive2 { name="KScorrect"; version="1.2.0"; sha256="1rymzllm97z22xwsn5wbn02c0xp0kfdp73mk9jrk81hfdpd15p4i"; depends=[MASS mclust]; };
+  KSgeneral = derive2 { name="KSgeneral"; version="0.1.0"; sha256="19rrm411c2fvx4bxi9qc6v9spqpf52k08i7gvhici9dx2hhm3134"; depends=[dgof MASS Rcpp]; };
   KTensorGraphs = derive2 { name="KTensorGraphs"; version="0.1"; sha256="1hsndxslqgca0ay4q277zjwnwz8bzwfkzz915dgqvjd2v4afrvzx"; depends=[]; };
   KappaGUI = derive2 { name="KappaGUI"; version="2.0.1"; sha256="0l2kgh9bflag5s056ib8fkajl56yr8c0qsmd9ma56i9ay7i540da"; depends=[irr shiny]; };
   KappaV = derive2 { name="KappaV"; version="0.3"; sha256="13mmfb8ijpgvzfj20andqb662950lp9g25k5b26r5ba65p7nhva7"; depends=[maptools PresenceAbsence rgeos sp]; };
-  KarsTS = derive2 { name="KarsTS"; version="1.1"; sha256="0dg0w7n2ga22wkbg0sxdx93zyksvvpwx1f87ki55mvk9i5kb2a5k"; depends=[BaylorEdPsych circular forecast mgcv missForest MVN nonlinearTseries rgl stinepack stlplus tcltk2 tkrplot tseries tseriesChaos zoo]; };
-  KenSyn = derive2 { name="KenSyn"; version="0.1"; sha256="0j5ql7d1dqkr2dzpwad6bspa8g5cjd4hjr6a5ig0zsa9rszcdyjn"; depends=[lme4 nlme]; };
+  KarsTS = derive2 { name="KarsTS"; version="2.0"; sha256="0mha0q5zvijrhrl0nsq229ipf6k2mhw2yqc21vvv8sifh9b9qp4y"; depends=[BaylorEdPsych circular forecast infotheo mgcv missForest MVN nonlinearTseries plot3D rgl stinepack stlplus tcltk2 tkrplot tseries tseriesChaos zoo]; };
+  KenSyn = derive2 { name="KenSyn"; version="0.2"; sha256="19xbdgxafrgxwz7swg7gzrkxszxy7ksgnmz96sar8ysmwrp7dz9i"; depends=[lme4 metafor nlme]; };
   Kendall = derive2 { name="Kendall"; version="2.2"; sha256="0z2yr3x2nvdm81w2imb61hxwcbmg14kfb2bxgh3wmkmv3wfjwkwn"; depends=[boot]; };
   KernSmooth = derive2 { name="KernSmooth"; version="2.23-15"; sha256="1xhha8kw10jv8pv8b61hb5in9qiw3r2a9kdji3qlm991s4zd4wlb"; depends=[]; };
   KernSmoothIRT = derive2 { name="KernSmoothIRT"; version="6.1"; sha256="1hq4sykddh9sg24qrnccii89nqxmq7hnldhn8wl6y62aj0h1nrqm"; depends=[plotrix Rcpp rgl]; };
-  KernelKnn = derive2 { name="KernelKnn"; version="1.0.6"; sha256="1kf8w7lmp6czgnpcnqh0qmvsisflgs1kdicaj66y3nq16qwbss74"; depends=[Rcpp RcppArmadillo]; };
+  KernelKnn = derive2 { name="KernelKnn"; version="1.0.8"; sha256="1xiz90n9wggn5fv42h8c6gd3j6vmkwyq1433wwnmzrz5kw7f6vgb"; depends=[Rcpp RcppArmadillo]; };
   Kernelheaping = derive2 { name="Kernelheaping"; version="2.1.8"; sha256="03m5dwgm98x6ncifyyp2yxln4bm87rkrx84bdihywjd0x73pbklv"; depends=[fastmatch ks magrittr MASS mvtnorm plyr sp sparr]; };
-  Kmisc = derive2 { name="Kmisc"; version="0.5.0"; sha256="0pbj3gf0bxkzczl6k4vgnxdss2wmsffqvcf73zjwvzvr8ibi5d95"; depends=[data_table knitr lattice markdown Rcpp]; };
   KnapsackSampling = derive2 { name="KnapsackSampling"; version="0.1.0"; sha256="17yzmd11k1n5iy54vbcvpzvkm8ypbl6n1kfi931wwrrcq9y7hg22"; depends=[lpSolve]; };
-  Knoema = derive2 { name="Knoema"; version="0.1.9"; sha256="0j6d8xyk7vadxcn9rd6dgmd8k0vb78rrwdh8yw377jf82ncg9283"; depends=[base64enc digest httr jsonlite lubridate xts zoo]; };
+  Knoema = derive2 { name="Knoema"; version="0.1.13"; sha256="10r7gpr39f32h4znmh8kywcs0l2g9ij75qqcyd3ai1fyif54wyqc"; depends=[base64enc digest httr jsonlite lubridate xts zoo]; };
   KnowBR = derive2 { name="KnowBR"; version="1.5"; sha256="18xcdlzr8ipsv4zxmk3424apqrgzgf87h00lwjw5ll2y99vy2ds5"; depends=[fossil mgcv plotrix sp vegan]; };
   KoNLP = derive2 { name="KoNLP"; version="0.80.1"; sha256="1chj8kv1l405dm0jcsxjjjxx395z05sfxbcc5vxnpbydx7lxa6zy"; depends=[devtools hash rJava RSQLite Sejong stringr tau]; };
   KoulMde = derive2 { name="KoulMde"; version="3.0.0"; sha256="01mczlrdrfwdp2cj10kdqay3qpg8xf2v7vym62pll9l8n595snrl"; depends=[Rcpp]; };
@@ -1693,14 +1729,14 @@ in with self; {
   KraljicMatrix = derive2 { name="KraljicMatrix"; version="0.2.0"; sha256="0vw95py3pk2r9kxvf6v4fq8m5zm9fr83acwxg3m8x6bvq51layma"; depends=[dplyr ggplot2 magrittr tibble]; };
   KrigInv = derive2 { name="KrigInv"; version="1.3.1"; sha256="0fcfv2vl572l8qp1ilhjai6zrw15bf1z41qm7xlfspfbj611ga7k"; depends=[DiceKriging pbivnorm randtoolbox rgenoud]; };
   L1pack = derive2 { name="L1pack"; version="0.38.19"; sha256="09n1045lsx1ap47mhzcqghmwwhj24kvpjjr3ysprj058jp5g7ri0"; depends=[]; };
-  LAGOSNE = derive2 { name="LAGOSNE"; version="1.0.0"; sha256="1s6rqg9lf7b3inglp44l8fsi313qp7l9vri4p99nb2x5lff9z4j7"; depends=[curl dplyr lazyeval magrittr purrr rappdirs sf stringr]; };
+  LAGOSNE = derive2 { name="LAGOSNE"; version="1.1.0"; sha256="08sf4mm40gv9mr57pxsl1b62s2dqvbvrhy2irzqspyqk5ai2aw0m"; depends=[curl dplyr lazyeval magrittr purrr rappdirs sf stringr]; };
   LAM = derive2 { name="LAM"; version="0.1-22"; sha256="0gj4j5yqyllxbhz6iayh0w473hzq0xc1r9dlyxhh67k9mg951phb"; depends=[CDM coda Rcpp RcppArmadillo sirt]; };
   LANDD = derive2 { name="LANDD"; version="1.1.0"; sha256="13szkww9nw8zywfrqd8mwgj9csgragm0bx8ia52rcpakpc3hv3hx"; depends=[BH doParallel fdrtool foreach GGally ggplot2 GOSemSim GOstats igraph intergraph Matrix modeest mvtnorm pROC Rcpp]; };
   LARF = derive2 { name="LARF"; version="1.4"; sha256="1sqib7smgjacn07ishwls1nlbvcb6fpp1vhrjwf9g4xf9jk30i8h"; depends=[Formula]; };
   LBSPR = derive2 { name="LBSPR"; version="0.1.2"; sha256="09jvdjagf4icnigbfw18z36ya4llg84fa6j2khd22cl60y81r5i3"; depends=[dplyr ggplot2 gridExtra plotrix RColorBrewer Rcpp shiny tidyr]; };
   LCA = derive2 { name="LCA"; version="0.1"; sha256="14nhx2fs18558zljnw56mdz3qx30v394llhzswxhznjfiiqc9z5h"; depends=[]; };
   LCAextend = derive2 { name="LCAextend"; version="1.2"; sha256="1y9azq9v42a3z5fq6gj8js89qblb2z93k4mg4jmw0wgkyv6mysfc"; depends=[boot kinship2 mvtnorm rms]; };
-  LCAvarsel = derive2 { name="LCAvarsel"; version="1.0"; sha256="17k3l2jzw5fik5pd14sqg8kshb2a4rxgm7hw5kzag7gni9fcilaz"; depends=[doParallel foreach GA MASS memoise nnet poLCA]; };
+  LCAvarsel = derive2 { name="LCAvarsel"; version="1.1"; sha256="0aqc9rbrc8n6s9xllmamby219qsnxd4ajvffjr21qlkhkaklirb1"; depends=[doParallel foreach GA MASS memoise nnet poLCA]; };
   LCF = derive2 { name="LCF"; version="1.7.0"; sha256="1n5gwnkj26b7w6bzapda049bd4aqb317cip05nf0vy04xjc8giyc"; depends=[quadprog]; };
   LCFdata = derive2 { name="LCFdata"; version="2.0"; sha256="1x3vbr6hdviqvd6dxn1kb449g0q5zkfmjsmr5nxd2g82p69lv3xm"; depends=[]; };
   LCMCR = derive2 { name="LCMCR"; version="0.4.3"; sha256="1pzavzlr3fml4chrh0fmj8688a3xa153w5gp404nx3qld5sizqrm"; depends=[]; };
@@ -1715,7 +1751,7 @@ in with self; {
   LEANR = derive2 { name="LEANR"; version="1.4.9"; sha256="053xy13ys5hibafdnbkwqdk36hw7dhanp4frfacpfpn5f9nfh95r"; depends=[foreach igraph]; };
   LEAP = derive2 { name="LEAP"; version="0.2"; sha256="1yrhanxvr7krvllqzv17qkc4wvmd7mgl57am8sn53773dbfipfc4"; depends=[]; };
   LEAPFrOG = derive2 { name="LEAPFrOG"; version="1.0.7"; sha256="0z9ahkk4qzc45h1r806frv9cd84vvshvn5mr84gx7qdxljfkfq6h"; depends=[alabama MASS]; };
-  LEGIT = derive2 { name="LEGIT"; version="1.1.1"; sha256="108bxw98z0hgm4nnxvn54c5npm48qsif7y91dqsjx69p6azckqmh"; depends=[doSNOW foreach formula_tools iterators pROC snow]; };
+  LEGIT = derive2 { name="LEGIT"; version="1.2.1"; sha256="1ma4rpchinl4i58ljcdfgwik1rfc79waicpv1f9wdddjfsijwyay"; depends=[boot doSNOW foreach formula_tools gtools Hmisc iterators pROC snow]; };
   LFDR_MLE = derive2 { name="LFDR.MLE"; version="1.0"; sha256="11vy6gg2x98s1y8a5ns9vcd61gw8ax1lhn4lvicdjbd1lg18nm83"; depends=[]; };
   LFDREmpiricalBayes = derive2 { name="LFDREmpiricalBayes"; version="1.0"; sha256="1imw3djmbpdyplv9dmdzzirp9imk88j0kcxcyfh8yr9ywgd77x6b"; depends=[matrixStats R6]; };
   LGEWIS = derive2 { name="LGEWIS"; version="1.1"; sha256="1i52vp0ghjzmyh4r8h6jpyij7x4skw99xvw017b56m8fg64zy70r"; depends=[CompQuadForm geeM mvtnorm SKAT]; };
@@ -1730,13 +1766,14 @@ in with self; {
   LMERConvenienceFunctions = derive2 { name="LMERConvenienceFunctions"; version="2.10"; sha256="08jz0i7sv7gn3bqckphbmnx0kc6yjnfvi06iyf7pcdzjaybxhj06"; depends=[fields LCFdata lme4 Matrix mgcv rgl]; };
   LMest = derive2 { name="LMest"; version="2.4.1"; sha256="06ak1aqk2sg4brdb09g3x7gkjbb3p11fwwnin3h67j8wh510ihyi"; depends=[MASS MultiLCIRT]; };
   LMfilteR = derive2 { name="LMfilteR"; version="0.1.1"; sha256="0wjrnzki6mnar3lxfr2mcvk98b58qkqpbb9xx7vgrw567g1ga1ig"; depends=[MASS]; };
+  LN0SCIs = derive2 { name="LN0SCIs"; version="0.1.5"; sha256="09zr6lrvv7lw9qp3vz4n2dv0v3q7wq06wwvwpb2pm0r335bnrf89"; depends=[]; };
   LNIRT = derive2 { name="LNIRT"; version="0.2.0"; sha256="02gaqn2pixry6qgybwszsv60pk6hzdd51axchkq3ma3gb6biw4fv"; depends=[MASS]; };
   LOGICOIL = derive2 { name="LOGICOIL"; version="0.99.0"; sha256="1wgg7kigzzk5ghjn3hkjf1bb8d6mvjfmkwq64phri5jpxd742ps9"; depends=[nnet]; };
   LOGIT = derive2 { name="LOGIT"; version="1.3"; sha256="1nx9ycrys0p08xr1n7bqgn47k5wz1zbp6w5pwsqk5c6f6did2rs1"; depends=[caret e1071 ggplot2 MASS pROC reshape]; };
   LOST = derive2 { name="LOST"; version="1.3"; sha256="01ymnczsnfml04hb6hbi041khkz2aki78qr3hriw7n3bzs5i7xim"; depends=[e1071 gdata MASS miscTools pcaMethods rgl shapes]; };
   LPCM = derive2 { name="LPCM"; version="0.45-0"; sha256="15gpb59556s28npdsw1r821rld7b11y1m2m97m320n9k0z4vbk3i"; depends=[]; };
   LPKsample = derive2 { name="LPKsample"; version="1.0"; sha256="0vxps8zd9zg1aw4p2qd8wamcjkbl68yvppnlvshm2ry5dahwz1wk"; depends=[apcluster igraph mclust]; };
-  LPM = derive2 { name="LPM"; version="2.6"; sha256="0fr84l4qxr1ckjafw0i8g6fn74g8qavcs218g3wa03ckab0y98ps"; depends=[fracdiff MASS QRM]; };
+  LPM = derive2 { name="LPM"; version="2.7"; sha256="1anjgflj1272xrghn3s9a21f2dfggppnzjqh3p8zaid91bzg0g34"; depends=[fracdiff MASS QRM]; };
   LPR = derive2 { name="LPR"; version="1.0"; sha256="16kmfm6p7cwnzpd054ik0cy0ipif6zssdfyxyfm0cijz8z4z40x7"; depends=[doParallel foreach glmnet iterators lattice Matrix slam]; };
   LPS = derive2 { name="LPS"; version="1.0.10"; sha256="0gf3jmhfki01z8fm5xdx59gxvhgzqd10x2iwa8369iz9dvwbjk8j"; depends=[]; };
   LPStimeSeries = derive2 { name="LPStimeSeries"; version="1.0-5"; sha256="0jmcy8076w4bzfnxaq2m3s60c1wdmywkwzfyrc19wdm8idf666wh"; depends=[RColorBrewer]; };
@@ -1747,40 +1784,42 @@ in with self; {
   LS2W = derive2 { name="LS2W"; version="1.3-3"; sha256="0pdsv7ld0j116rh94m5y1i2mwrzc80fqxmc6ykc51i1sj6ws3i5k"; depends=[wavethresh]; };
   LS2Wstat = derive2 { name="LS2Wstat"; version="2.0-3"; sha256="0wkh1a6xbp3qg5favxsj166jcgdza16zki675gswxckana6s4is7"; depends=[geoR LS2W matrixStats RandomFields spdep]; };
   LSAfun = derive2 { name="LSAfun"; version="0.5.1"; sha256="0wj2j53jizg014sppag9zbs5hzc3mvpg1fx1s7l4ff6rabhgvlff"; depends=[lsa rgl]; };
-  LSAmitR = derive2 { name="LSAmitR"; version="1.0-0"; sha256="18rpvbiq3vqdcxzbx15x16y4hwdk050fk0wpccwcdgzlf79fjv6f"; depends=[Hmisc lme4]; };
+  LSAmitR = derive2 { name="LSAmitR"; version="1.0-1"; sha256="0p1j4q1b7488wbwl2c9py6ldq2j7ri1dvnmmknx5lwvzv0xsawsd"; depends=[Hmisc lme4]; };
   LSC = derive2 { name="LSC"; version="0.1.5"; sha256="1nlnwqb24sbgvl96azh8a833ij5xknjr2wr8shs59lm2n63a3ql9"; depends=[fields gam LICORS Matrix RColorBrewer]; };
-  LSD = derive2 { name="LSD"; version="3.0"; sha256="069p33aw6iwikp82b7b8wa77wlyjqwr4hcwvrgaxgwqdgn6jjg3k"; depends=[]; };
-  LSDinterface = derive2 { name="LSDinterface"; version="0.3.1"; sha256="11cckjhpbnckaf06gy7864l26sics9ksilynrpjv1gbb2ry2sdyl"; depends=[abind]; };
+  LSD = derive2 { name="LSD"; version="4.0-0"; sha256="0fsp3pwrnnic9mzkd6yxa4bnxbvg68712lb20vd42wf6jb39r2h3"; depends=[]; };
+  LSDinterface = derive2 { name="LSDinterface"; version="0.4.0"; sha256="0nj4m924cj7x2djalrfyrrmycq2ha6s52m34kjgs7fc9f548lhx0"; depends=[abind]; };
+  LSDsensitivity = derive2 { name="LSDsensitivity"; version="0.1.4"; sha256="1gfd890vr31ab37xbx7yhwbqk6y659d0dqyir7vrgma48cd0nidv"; depends=[abind car DiceKriging kSamples LSDinterface randtoolbox rgenoud sensitivity tseries]; };
   LSMonteCarlo = derive2 { name="LSMonteCarlo"; version="1.0"; sha256="0w5042phkba5dw92r67ppp2s4khjpw5mm701dh9dya9lhj88bz6s"; depends=[fBasics mvtnorm]; };
   LSPFP = derive2 { name="LSPFP"; version="1.0.0"; sha256="074qd7zxa54cawipmba1khb6hyrkg553vc25gf2z0ydyv14shm0w"; depends=[bit64 data_table R_utils RCurl seqinr tcltk2]; };
   LSRS = derive2 { name="LSRS"; version="0.1.0"; sha256="13xfh2v0xnsvvxayvl9mkhdzd5x3qqdlqsa109z3j9yrhs3615ha"; depends=[]; };
   LSTS = derive2 { name="LSTS"; version="1.0"; sha256="1vgdqyj6k50gqfffqfb4n3sw27jrq21nl2h8sz8942w4a8fn7sgv"; depends=[]; };
   LTPDvar = derive2 { name="LTPDvar"; version="1.2"; sha256="0r9v5g5y9n85jdcvm7zpapm73ism48m3mmybpcmgcs028h2ndv7v"; depends=[]; };
   LTR = derive2 { name="LTR"; version="1.0.0"; sha256="15g5hbrwhab80sarbjgwzvsn6c4fl18h014kz5fpzf0n1rijybik"; depends=[]; };
-  LTRCtrees = derive2 { name="LTRCtrees"; version="0.5.0"; sha256="18awxiln2ilr0jjyvkv47a3xy7v8rjlaksklb4pcn1kdlvb1nqf0"; depends=[interval partykit rpart survival]; };
+  LTRCtrees = derive2 { name="LTRCtrees"; version="1.0.0"; sha256="08wkhd7sqk0q9sahg6bd1m2xgl5yk9ldvripa6vyps0nni1h8lb6"; depends=[interval inum partykit rpart survival]; };
   LVMMCOR = derive2 { name="LVMMCOR"; version="0.01.1"; sha256="1lq4hqcg0qkywdr4a22m1fr3m97749mm6n2jzdj9i7jrf0agc1fs"; depends=[MASS nlme]; };
   LW1949 = derive2 { name="LW1949"; version="1.1.0"; sha256="147ymp7j98ihp1dcz3p5v9ar6h767phjdnga5q5vf1wwa2mxawg7"; depends=[MASS mgcv plotrix]; };
   LZeroSpikeInference = derive2 { name="LZeroSpikeInference"; version="1.0.3"; sha256="15x29afaq13iwlj66h97k3kczg9rfgp6i9d76rji58hfgh8i8by6"; depends=[]; };
   LaF = derive2 { name="LaF"; version="0.8.0"; sha256="1nasj0502i0dbzqgm1pdvmc0wj1hk2q5fzanpcsh7zslsikiqxyq"; depends=[Rcpp]; };
-  LabourMarketAreas = derive2 { name="LabourMarketAreas"; version="3.1"; sha256="0ic6rm47iqkrlds7cshfcd0vjpgd7hldlicjq1wzxx0p3fbbnqjm"; depends=[data_table maptools rgdal rgeos sp spdep]; };
+  LabourMarketAreas = derive2 { name="LabourMarketAreas"; version="3.2"; sha256="08jm419cf22z144csif2ndf53743v1xl9zpa6zamd3df2snr59x2"; depends=[data_table maptools rgdal rgeos sp spdep]; };
   Lahman = derive2 { name="Lahman"; version="6.0-0"; sha256="1616iaa28z6wrxcvvmnic5awj33b7km9yxnn8bnll9yw99ks6qk6"; depends=[dplyr]; };
   LakeMetabolizer = derive2 { name="LakeMetabolizer"; version="1.5.0"; sha256="06mvdrdyl0rh9rwd0jxww0sycadcp7cj08hq35q6vyzq0jkxn2xf"; depends=[plyr rLakeAnalyzer]; };
   Lambda4 = derive2 { name="Lambda4"; version="3.0"; sha256="04ikkflfr0nmy1gr3gfldlh2v8mpl82k1wwnzp57d2kn75m9vbxz"; depends=[]; };
   LambertW = derive2 { name="LambertW"; version="0.6.4"; sha256="09ygalklv0d767nwziqwaxa7h517rzqgaznmb04q43122x2gwb3k"; depends=[ggplot2 lamW MASS RColorBrewer Rcpp reshape2]; };
   Langevin = derive2 { name="Langevin"; version="1.2"; sha256="0iy1nh4wzipw8spmfr0kscdnpaz3cq4idkbl5khiia2jid0kimvl"; depends=[Rcpp RcppArmadillo]; };
   LaplaceDeconv = derive2 { name="LaplaceDeconv"; version="1.0.4"; sha256="0n56cmrb536j1vmfizzag1x8wm68c2znpclwbdl8qraqzp8rmffx"; depends=[orthopolynom polynom]; };
-  LaplacesDemon = derive2 { name="LaplacesDemon"; version="16.0.1"; sha256="0yc6bv1mvs8ivrjgi49xz5bn4if24693rw148w5zxd11r3ryy8dy"; depends=[]; };
+  LaplacesDemon = derive2 { name="LaplacesDemon"; version="16.1.0"; sha256="1fx85kfdvap914b2fsylkd6wiwcfxpmndkrynivwjczwx1hr5na1"; depends=[]; };
   LassoBacktracking = derive2 { name="LassoBacktracking"; version="0.1.2"; sha256="1z1cnj6r6cq3b8xa9qck3ijfmzsr70r2p9m1ndakijb36pgwrzcs"; depends=[Matrix Rcpp]; };
-  LassoSIR = derive2 { name="LassoSIR"; version="0.1"; sha256="0nc32kbmg9fn786yldw8x7753nky78aqwdh11kffc6jl34l3svys"; depends=[glmnet]; };
+  LassoSIR = derive2 { name="LassoSIR"; version="0.1.1"; sha256="0ap8335ms12nsc7jvd48244zya54w05wj91qkhb0i63730r508c3"; depends=[glmnet]; };
   Laterality = derive2 { name="Laterality"; version="0.9.3"; sha256="0pl5bfbkzhgxjjzzh99s6rh4jsq0pbcgc902i0z2lmmivgs5qmd6"; depends=[ade4]; };
   LatticeKrig = derive2 { name="LatticeKrig"; version="6.4"; sha256="02il7cks03kmbra3sf90kdfp0dzg4kfmy512hd542nzwwa8pivsm"; depends=[fields spam]; };
+  Lavash = derive2 { name="Lavash"; version="1.0"; sha256="0cjl8crk0rdkyzp069fk4k0sapcjmqm3q40z5mgl0i1n59kn4s07"; depends=[glmnet MASS pracma]; };
   LeArEst = derive2 { name="LeArEst"; version="0.1.5"; sha256="13rxch3f16yvcil255abdp2vc7v2ipy3xj38s7hmjikqfdmxpkw4"; depends=[conicfit jpeg opencpu]; };
   LeLogicielR = derive2 { name="LeLogicielR"; version="1.2"; sha256="0h52pzrksi1mn55mnxbfi61hl7x61cnkhp450slfrk68f6kp30x6"; depends=[gdata IndependenceTests RColorBrewer xtable]; };
   LeafAngle = derive2 { name="LeafAngle"; version="1.2-1"; sha256="0g3i5300f3rvjz7g7z8s5n8xdcsp41gf1vnr4g36m1likddfpxlx"; depends=[]; };
   LeafArea = derive2 { name="LeafArea"; version="0.1.7"; sha256="0pn6hh9ipr609pi49ls8wxnx7v8q1wyp84i22zzwxyzwaap5nmj2"; depends=[]; };
   LearnBayes = derive2 { name="LearnBayes"; version="2.15"; sha256="0cz2rgqy1cmdz2h1qbdvfqxmmdzmg2z1scdlxr7k385anha13ja5"; depends=[]; };
-  LearnGeom = derive2 { name="LearnGeom"; version="1.0"; sha256="0n97jzmi7zg1iysawgr753mig49fvzymldgh8nqqcgql1rjf3yph"; depends=[RgoogleMaps]; };
-  LendingClub = derive2 { name="LendingClub"; version="1.0.3"; sha256="0gnykp51nnchm79w0s3wx7q5790yzjp1fjgm12v4jjxzq30gjmcm"; depends=[dplyr httr jsonlite plyr]; };
+  LearnGeom = derive2 { name="LearnGeom"; version="1.3"; sha256="0fqf5k3gsdxwyfcbkypqiq0ir8ay8r9bdy8iljhj308ammq0mxzk"; depends=[RgoogleMaps]; };
+  LendingClub = derive2 { name="LendingClub"; version="1.0.4"; sha256="03pgarbraj6in7pk7zaci98aq6dh52vsqb64my5p0bczgl2cpzmm"; depends=[dplyr httr jsonlite plyr]; };
   LexisPlotR = derive2 { name="LexisPlotR"; version="0.3"; sha256="1qdgs6p11j0ign27bbnn32g65sw42982ijrig5cwqsdvxpdabjl8"; depends=[ggplot2]; };
   LiblineaR = derive2 { name="LiblineaR"; version="2.10-8"; sha256="17ykazac7iv02bxl8xg948vhbdr32icdm1v4bk31zmslp4xsk08g"; depends=[]; };
   LiblineaR_ACF = derive2 { name="LiblineaR.ACF"; version="1.94-2"; sha256="1ldkb63yhm1ki8i585wp5byx6y0kvclwy3ncacgcdqqk0p41cyi6"; depends=[]; };
@@ -1793,9 +1832,8 @@ in with self; {
   LindenmayeR = derive2 { name="LindenmayeR"; version="0.1.13"; sha256="01wnvmxdb91ai21h3plgsmy6ds7564s5wq2xyr905ma4a2d8afn5"; depends=[stringr]; };
   LindleyR = derive2 { name="LindleyR"; version="1.1.0"; sha256="163i604q683znp6q544hnv4vibygwvsxcfhh8m7iaqr42li3c0ak"; depends=[lamW]; };
   LinearRegressionMDE = derive2 { name="LinearRegressionMDE"; version="1.0"; sha256="0nl29l10y5kpds1i4sv7jwizq61fmh5c0zpj8x64qfif4l6y4v0d"; depends=[]; };
-  LinearizedSVR = derive2 { name="LinearizedSVR"; version="1.3"; sha256="0h3xmlnd5x37r5hdhcz90z5n1hsbr2ci3m939i89p1x9644i2l5g"; depends=[expectreg kernlab LiblineaR]; };
-  LinkageMapView = derive2 { name="LinkageMapView"; version="2.1.0"; sha256="1k2qrpxvy9ymkll63icbm2b9alfw0hg10rawigwbs2xv9n8vyb4p"; depends=[plotrix RColorBrewer]; };
-  LinkedMatrix = derive2 { name="LinkedMatrix"; version="1.2.0"; sha256="14q8n0zqm21fwfyfqvxdacxj6mdipgi2143d8xksifk5ihhdj64v"; depends=[]; };
+  LinkageMapView = derive2 { name="LinkageMapView"; version="2.1.2"; sha256="101g4djzkxgxbn87an2vz4s9nwn8gwz7a3p3wg0y4zpdd1pdp716"; depends=[plotrix qtl RColorBrewer]; };
+  LinkedMatrix = derive2 { name="LinkedMatrix"; version="1.3.0"; sha256="1p5rg50g1pq700cx9jk4ackiyin5c2nanxq677cn840w6r11vm2g"; depends=[crochet]; };
   Lmoments = derive2 { name="Lmoments"; version="1.2-3"; sha256="13p0r4w16jvjnyjmkhkp3dwdfr1gap2l0k4k5jy41m8nc5fvcx79"; depends=[]; };
   LncFinder = derive2 { name="LncFinder"; version="1.0.0"; sha256="1ygbmazjm2jk0wrd13khpx8rkwd51cb50qxs2zdad0w09705mpsx"; depends=[caret e1071 seqinr]; };
   LncMod = derive2 { name="LncMod"; version="1.1"; sha256="08001y7s93i3k3478jqfh9zsgpq6ym1xmdmldi7s76zbfr1nknvy"; depends=[pheatmap survival]; };
@@ -1812,31 +1850,30 @@ in with self; {
   LogisticDx = derive2 { name="LogisticDx"; version="0.2"; sha256="0ciygvynnyajpn1glxy6mwj9vbl7iv8a8dfsi6wxjxp2rac68rig"; depends=[aod data_table pROC RColorBrewer rms speedglm statmod]; };
   LogitNet = derive2 { name="LogitNet"; version="0.1-1"; sha256="08xi5rpbqkc1b3qj24blv3l0r68wcqbsbjcqxiypm75f3c2irc4i"; depends=[]; };
   LogrankA = derive2 { name="LogrankA"; version="1.0"; sha256="005zkpzi8h03qvqlpkygrf9xv4q77klafkfxw47x04jvkhklwigb"; depends=[]; };
-  LoopAnalyst = derive2 { name="LoopAnalyst"; version="1.2-4"; sha256="02p46agsdbvw6dpgzahq9hfmy184jrkwa1hhnrcbrsmm54n3m2bx"; depends=[nlme]; };
+  LoopAnalyst = derive2 { name="LoopAnalyst"; version="1.2-6"; sha256="1gy9v6qiwkwbwp4snif2imf6zn50ffjrig54ln57c5v5pk3phnvv"; depends=[nlme]; };
   LotkasLaw = derive2 { name="LotkasLaw"; version="0.0.1.0"; sha256="11kq52yavicimp7ll7ljrs69a5fxf68ydb9md7v6b02iw5mwbmz7"; depends=[]; };
-  LowRankQP = derive2 { name="LowRankQP"; version="1.0.2"; sha256="0is7v4cy4w1g3wn4wa32iqv4awd1nwvfcb71b3yk5wj59lpm8gs3"; depends=[]; };
+  LowRankQP = derive2 { name="LowRankQP"; version="1.0.3"; sha256="1a46rk0fhpnrlfzmydy7zjswrm6hf056qxgf5p10naq6025whf8x"; depends=[]; };
   LowWAFOMNX = derive2 { name="LowWAFOMNX"; version="1.1.1"; sha256="0f75qsv6pisgvk39yagzfxscnyfsgh63rmhp4gpybpl0pqmjp48x"; depends=[Rcpp RSQLite]; };
   LowWAFOMSobol = derive2 { name="LowWAFOMSobol"; version="1.1.1"; sha256="1ym3i2m1am356di9lcp5nfmxq0np3c4bwsv6bbmf7hg02j7dhwi4"; depends=[Rcpp RSQLite]; };
   LumReader = derive2 { name="LumReader"; version="0.1.0"; sha256="1h2r3c9xkwlnaicn65085bdx7y86ha2fpd5mxirqax5lm6d8lirc"; depends=[gridExtra lattice plotly shiny]; };
   Luminescence = derive2 { name="Luminescence"; version="0.7.5"; sha256="07v78diyjvbymwidpa9f5bykaafczv0f88f6r926mk949sj1ici4"; depends=[bbmle data_table httr magrittr matrixStats minpack_lm raster Rcpp RcppArmadillo readxl shape XML zoo]; };
   M3 = derive2 { name="M3"; version="0.3"; sha256="1l40alk166lshckqp72k5zmsgm7s5mgyzxlp11l64mgncjwkw2r3"; depends=[mapdata maps ncdf4 rgdal]; };
-  M4comp = derive2 { name="M4comp"; version="0.0.1"; sha256="1lxm6qcbdp7i00vxbikhyl7pdxnz4czar10kh9xm0qwy8sl8lxg2"; depends=[]; };
   MADPop = derive2 { name="MADPop"; version="1.1"; sha256="1w2jbiki6d14y32p8a50b8g53m1iva2kgik14yg27z5hx1rwwq97"; depends=[BH Rcpp RcppEigen rstan StanHeaders]; };
-  MAGNAMWAR = derive2 { name="MAGNAMWAR"; version="2.0.0"; sha256="0vvzjqjhxnjxj3askm708bl07ph4zs9jykpw4yg5dsysy58cjl0z"; depends=[ape coxme doParallel dplyr foreach iterators lme4 multcomp plyr qqman seqinr survival]; };
-  MAINT_Data = derive2 { name="MAINT.Data"; version="1.2.0"; sha256="0smc1mbnzndmna6kr9jk268llzsr3lkczjvz0kmkm6dzcw21jgd4"; depends=[MASS mclust miscTools pcaPP Rcpp RcppEigen robustbase rrcov sn]; };
+  MAGNAMWAR = derive2 { name="MAGNAMWAR"; version="2.0.2"; sha256="11031gmc6zrhn6vdzza4qqvwc48h09kbvkikqznqr9hhkysv7c11"; depends=[ape coxme doParallel dplyr foreach iterators lme4 multcomp plyr qqman seqinr survival]; };
+  MAINT_Data = derive2 { name="MAINT.Data"; version="1.2.1"; sha256="0fmlmb88005diqwbxlgkzzb7bvxpdkiqiadp649id3mgcz100kcd"; depends=[MASS mclust miscTools pcaPP Rcpp RcppEigen robustbase rrcov sn]; };
   MALDIquant = derive2 { name="MALDIquant"; version="1.17"; sha256="047s6007ydc38x8wm027mlb4mngz15n0d4238fr8h43wyll5zy0z"; depends=[]; };
-  MALDIquantForeign = derive2 { name="MALDIquantForeign"; version="0.11"; sha256="11akflnz4d3vbal1zqyv58n8dwggnix2lzd1r1kkvwja6izb5z08"; depends=[base64enc digest MALDIquant readBrukerFlexData readMzXmlData XML]; };
+  MALDIquantForeign = derive2 { name="MALDIquantForeign"; version="0.11.1"; sha256="1aj6gakhbpis576b264s43w55dhmd5rszj54z910plybxq8hzmir"; depends=[base64enc digest MALDIquant readBrukerFlexData readMzXmlData XML]; };
   MALDIrppa = derive2 { name="MALDIrppa"; version="1.0.1"; sha256="1y2nr65cvqkvzzjsr3lmpk58lqd5rqvmzjdakhwhw4s6ymggd9hf"; depends=[lattice MALDIquant robustbase signal wmtsa]; };
   MAMS = derive2 { name="MAMS"; version="1.2"; sha256="19w6ydsbr60p1cmizhhmsajzasg76r23x29qcaa7mibcb5gh1yzs"; depends=[mvtnorm]; };
   MAMSE = derive2 { name="MAMSE"; version="0.2-1"; sha256="0spi7fqkxjiw5j0nf7ambcr8kpzdhjzh9y3dk23y1mrk2dgc5dkw"; depends=[]; };
   MANCIE = derive2 { name="MANCIE"; version="1.4"; sha256="0940xl3z5bca6hcnj2bj341l79wajilxlxzmyz3dlgrz0b3bbdmm"; depends=[]; };
   MANOVA_RM = derive2 { name="MANOVA.RM"; version="0.2.1"; sha256="1pq1mkanp1jxyygw09p4x8cgfbkrks7g6qvzfdjgdy8kli1b3mmw"; depends=[ellipse magic MASS Matrix plotrix plyr]; };
-  MAPA = derive2 { name="MAPA"; version="2.0.2"; sha256="1sk95zpsw6lhciyyq8jzz8mdj4gbnq5vk9z3hxbyl0v0g2rr1gqz"; depends=[forecast RColorBrewer smooth]; };
+  MAPA = derive2 { name="MAPA"; version="2.0.4"; sha256="02s223s58k2jk49m0xlz3q9m3nip3h4dl4v58j18z2vgi54dwnjr"; depends=[forecast RColorBrewer smooth]; };
   MAPLES = derive2 { name="MAPLES"; version="1.0"; sha256="0hzsh7z1k7qazpxjqbm9842zgdpl51irg7yfd119a7b2sd3a8li9"; depends=[mgcv]; };
   MAR1 = derive2 { name="MAR1"; version="1.0"; sha256="1r6j890icl5h3m2876sakmwr3c65513xnsj68sy0y0q7xj3a039l"; depends=[bestglm leaps]; };
   MARSS = derive2 { name="MARSS"; version="3.9"; sha256="0vn8axzz0nqdcl3w00waghz68z8pvfm764w11kxxigvjpw2plj31"; depends=[KFAS mvtnorm nlme]; };
   MARX = derive2 { name="MARX"; version="0.1"; sha256="1yanv7q5l8ybw3mh0rvhxyqi2sp8w4b9vnas7lpqflc06j4nnv4p"; depends=[fBasics matlab stabledist tseries]; };
-  MASS = derive2 { name="MASS"; version="7.3-47"; sha256="1gy6z7ly9wn86rfn9xrmqiqq1ijw3pkasrr2299kbzsgx2mwsi7d"; depends=[]; };
+  MASS = derive2 { name="MASS"; version="7.3-48"; sha256="02q95ba909p2gxnzfp295ipxjnv14f7bm55nicxwn2kj8hizpzqd"; depends=[]; };
   MASSTIMATE = derive2 { name="MASSTIMATE"; version="1.3"; sha256="0dsqinl6998jv63m6scljszpi0qb050gj5d4wnp0pcxfs9awi2gj"; depends=[]; };
   MAT = derive2 { name="MAT"; version="2.2"; sha256="093axw2zp4i3f6s9621zwibcxrracp77xrc0q5q0m4yv3m35x908"; depends=[Rcpp RcppArmadillo]; };
   MATA = derive2 { name="MATA"; version="0.3"; sha256="006mnc4wqh9vdigfzrzx4csgczi0idvlwb6r23w5mmsfbn0ysdm5"; depends=[]; };
@@ -1848,9 +1885,9 @@ in with self; {
   MAclinical = derive2 { name="MAclinical"; version="1.0-5"; sha256="1g0ka1kqww2xim8rp5rznkzn0a541zvf841s3lbphfh9k3y3ixs3"; depends=[e1071 party plsgenomics st]; };
   MAd = derive2 { name="MAd"; version="0.8-2"; sha256="0mhys27rmzb0kal4jr8j2y44z4qq46fw260sxl8da9qqvplcwq1p"; depends=[]; };
   MBA = derive2 { name="MBA"; version="0.0-9"; sha256="06kmrdkhwwvr3kd5w8ws6r528hhpvbhixyj98lv36kkwlx14x06g"; depends=[BH]; };
-  MBC = derive2 { name="MBC"; version="0.10-2"; sha256="0c40k3m9z9cqk3778hwyy0i56qnsvw1dwpa6p9v097fbpacfsrg2"; depends=[energy Matrix]; };
+  MBC = derive2 { name="MBC"; version="0.10-4"; sha256="1fp06xx9jpz5mcxs0yppzzhch9w9c1qbsdbb60r4izrxnrhggpf7"; depends=[energy Matrix]; };
   MBCluster_Seq = derive2 { name="MBCluster.Seq"; version="1.0"; sha256="0xbi2r0g0gzsy05qrq1ljr5f5s3glwxj204vk2f1lgwdx3fd116m"; depends=[]; };
-  MBESS = derive2 { name="MBESS"; version="4.4.1"; sha256="1mmx0rlnw0kk04x55dqj68cfzpsba3icj7px5x5vgwfkf6qazg94"; depends=[boot gsl lavaan MASS mnormt nlme OpenMx sem semTools]; };
+  MBESS = derive2 { name="MBESS"; version="4.4.3"; sha256="03i7xpcb7xx8gzxdz3abdylga1hbyvz4k0m6bi4vkgyf4y2v6xv8"; depends=[boot gsl lavaan MASS mnormt nlme OpenMx sem semTools]; };
   MBHdesign = derive2 { name="MBHdesign"; version="1.0.79"; sha256="1qz0igm8h3ij8yc9bg3vr3mkmf99h1kyxscdhkfphc66zaazhyw1"; depends=[class geometry mgcv mvtnorm randtoolbox]; };
   MBI = derive2 { name="MBI"; version="1.0"; sha256="1lb0sjwa6x360n9a9pagz6yhxh37gxq1fk0f5c3i2sd56ny9jpns"; depends=[]; };
   MBSGS = derive2 { name="MBSGS"; version="1.1.0"; sha256="1h5vhmpgrqza12j7ivhwgd5wyb7kkb8mjbxl5w756vyid8g03flz"; depends=[MASS MCMCpack mgcv mnormt truncnorm]; };
@@ -1858,7 +1895,7 @@ in with self; {
   MBmca = derive2 { name="MBmca"; version="0.0.3-5"; sha256="0p7ddpsy4hwkfwyyszidi33qpdg4xllny7g9x24gk782p7kjfgq9"; depends=[chipPCR robustbase]; };
   MC2toPath = derive2 { name="MC2toPath"; version="0.0.16"; sha256="0jdn9wpxavn2wrml907v23mfxr62wwjdh7487ihjj59g434ry7wh"; depends=[RNetCDF]; };
   MCAvariants = derive2 { name="MCAvariants"; version="2.0"; sha256="0akff64v49d5r0wvspal0pz17jhz1ry4vdmj47m28gzjj69zcab0"; depends=[]; };
-  MCDA = derive2 { name="MCDA"; version="0.0.17"; sha256="1j9lahacdhvcvj7h32yb9fimlwfcl2q8jc7dlvnsc95wai43khfr"; depends=[combinat glpkAPI RColorBrewer Rglpk]; };
+  MCDA = derive2 { name="MCDA"; version="0.0.18"; sha256="1m8kf8xxli3dbbabrcanpsmsmywf21ma0nb9jq2phz7ifgladdyi"; depends=[combinat glpkAPI RColorBrewer Rglpk]; };
   MCDM = derive2 { name="MCDM"; version="1.2"; sha256="0r27y9mqvfnv1m0yi2xdyjr4y1s43d5yav960kz2xa732hrrxw01"; depends=[RankAggreg]; };
   MCI = derive2 { name="MCI"; version="1.3.3"; sha256="1wn8lcr5sq3697nsmly6syb9jv7p99ks0fy933ff5rx54x3rf9hz"; depends=[]; };
   MCL = derive2 { name="MCL"; version="1.0"; sha256="1w36h4vhd525h57pz6ik3abbsrvxnkcqypl2aj1ijb6wm7nfp4ri"; depends=[expm]; };
@@ -1866,9 +1903,9 @@ in with self; {
   MCMC_qpcr = derive2 { name="MCMC.qpcr"; version="1.2.3"; sha256="0b9n793spljmsb58jp41vnl9c753xqaw1g4wbi4ax348cvi09jk8"; depends=[coda ggplot2 MCMCglmm]; };
   MCMC4Extremes = derive2 { name="MCMC4Extremes"; version="1.1"; sha256="06p6xdbja7vrdq4vnhybpkmyf4rkaihcmy9sc81sb0h2wa21vcq0"; depends=[evir]; };
   MCMCglmm = derive2 { name="MCMCglmm"; version="2.25"; sha256="0crici0g6x2471kk9092f72gc6ghbwwqid3w8jsnsvy6ymmk2wih"; depends=[ape coda corpcor cubature Matrix tensorA]; };
-  MCMCpack = derive2 { name="MCMCpack"; version="1.4-0"; sha256="0cz5djmf1xfv54sgwan0r6ln1mlnkpnqh2zhqkss2m3ys2v087yh"; depends=[coda lattice MASS mcmc quantreg]; };
+  MCMCpack = derive2 { name="MCMCpack"; version="1.4-2"; sha256="1nizmfxyyrp0sbmyprgm97xmi3amxwix1gj7p9v0sjjklv1djap4"; depends=[coda lattice MASS mcmc quantreg]; };
   MCMCprecision = derive2 { name="MCMCprecision"; version="0.3.7"; sha256="0pbyg6v478di1w9cpp2rmhr4p5ncnwmks042981snqc5gnwysjx4"; depends=[combinat Matrix Rcpp RcppArmadillo RcppEigen RcppProgress]; };
-  MCMCvis = derive2 { name="MCMCvis"; version="0.8.1"; sha256="1j2b5gpd59m67r88nhgqaibjdv1gfzsa9bjjai95jqkbbklq57bn"; depends=[coda rstan]; };
+  MCMCvis = derive2 { name="MCMCvis"; version="0.9.4"; sha256="0pfj14pji0dqzlq6vy76prkh8m0hj784yjr5lz3p68kviwzrk9r6"; depends=[coda overlapping rstan]; };
   MCPAN = derive2 { name="MCPAN"; version="1.1-20"; sha256="0j36dhi3bf3q14bbcmrmipz2fcn6g9gsqidzm43i8x5r7hcvv2lh"; depends=[magic MCMCpack multcomp mvtnorm plyr]; };
   MCPMod = derive2 { name="MCPMod"; version="1.0-10"; sha256="0ns74qhm9bzi70m9bn61zs4mmqmmxxi77f49pdrcnr8wrrnn1kdn"; depends=[lattice mvtnorm]; };
   MCPerm = derive2 { name="MCPerm"; version="1.1.4"; sha256="0g65vzn43k6qrsglxd2kz245f662gl3c2gdz6qvvxa96v6q9lhh1"; depends=[metafor]; };
@@ -1877,27 +1914,26 @@ in with self; {
   MChtest = derive2 { name="MChtest"; version="1.0-2"; sha256="01lflilrp42m236cznn6qgzvv5v9fzpx6wcfxp3q545bw2xmbdvj"; depends=[]; };
   MConjoint = derive2 { name="MConjoint"; version="0.1"; sha256="02yik28mhvd4rfqwrprdbdjx9c49ds55fh042bsjajs2ip467w5c"; depends=[]; };
   MDM = derive2 { name="MDM"; version="1.3"; sha256="1bvjhl243rf19829ly1qc20ik937hb82lq23aiysj7ya55z8hdpf"; depends=[nnet]; };
-  MDMR = derive2 { name="MDMR"; version="0.5.0"; sha256="185qdm39mydsb7h09j0763a13wd84h0w8rx2g0xwdynp2rakkw75"; depends=[car CompQuadForm lme4]; };
+  MDMR = derive2 { name="MDMR"; version="0.5.1"; sha256="1pv57xl7pjsqxz1j8mnfmjaa36mlr749yb4c44ppdrx6khvw662x"; depends=[car CompQuadForm lme4]; };
   MDPtoolbox = derive2 { name="MDPtoolbox"; version="4.0.3"; sha256="0aaw787fvcyhw6mbl42icgqfdzvfr618vg179984xqifafr40dyc"; depends=[linprog Matrix]; };
   MDR = derive2 { name="MDR"; version="1.2"; sha256="0g2fvvcwagml6635va87nc0ijzy0pypx5aqzz7mf5w13j0wpm24y"; depends=[lattice]; };
+  MDSMap = derive2 { name="MDSMap"; version="1.0"; sha256="15557ca83bvsqcmsa48vispagg9a05658i22cqk706shjsp782n5"; depends=[princurve reshape rgl smacof]; };
   MDimNormn = derive2 { name="MDimNormn"; version="0.8.0"; sha256="080m0irx5v8l45fg9ig5yzcj92s3ah8a9aha288byszli1cchgpn"; depends=[]; };
   MDplot = derive2 { name="MDplot"; version="1.0.1"; sha256="1xijh18hrkb807nfkdr7g642aspn5psc8nw29q387jl5hly2w8s9"; depends=[gplots gtools MASS RColorBrewer]; };
   MEET = derive2 { name="MEET"; version="5.1.1"; sha256="02xz2zkwqaf1wck9a3h1j6z8dasw4j0zqa88jg6h10wqzcrlp9ba"; depends=[Hmisc KernSmooth Matrix pcaMethods ROCR seqinr seqLogo]; };
   MEGENA = derive2 { name="MEGENA"; version="1.3.6"; sha256="0ylv7kbk0x3rm08aiwci4p3kma08qj4szlw2h1d6wcqmipy93v8s"; depends=[BH cluster doParallel foreach fpc ggplot2 ggrepel igraph Matrix Rcpp reshape]; };
   MEMSS = derive2 { name="MEMSS"; version="0.9-2"; sha256="0wyw8yjs4miwgwdfcnfbzvkxrgv5r3jlg3cg8q2vy7s69wvhksmy"; depends=[lme4]; };
   MEPDF = derive2 { name="MEPDF"; version="1.0"; sha256="171pzhz4z0373663mfnfi5cqd9gnj0aamwr56ag16dxm8xfyppcj"; depends=[MASS plyr pracma]; };
-  MESS = derive2 { name="MESS"; version="0.4-15"; sha256="0cfhbl099znjyij6sfhp5ma7yk1cj20paqixdy8lrif31mgkibd0"; depends=[geeM geepack glmnet kinship2 MASS Matrix mvtnorm Rcpp RcppArmadillo]; };
+  MESS = derive2 { name="MESS"; version="0.5.0"; sha256="1khm9x7kk68xcnjm9iij1s5zvj8n6dp1iwyp2y8fcv12qnvrjpbc"; depends=[geeM geepack glmnet kinship2 MASS Matrix mvtnorm Rcpp RcppArmadillo]; };
   MEclustnet = derive2 { name="MEclustnet"; version="1.1"; sha256="1ayyrxdb9qd7fxnr8y2lbjcd2c8m38mjm1ks6z22vyddbhkf78in"; depends=[e1071 ellipse latentnet MASS mclust mvtnorm nnet vegan]; };
   MExPosition = derive2 { name="MExPosition"; version="2.0.3"; sha256="1l27wp0psfvlkk79fhb8ypf8awardjljg1f37yj42friy9pdfksz"; depends=[ExPosition prettyGraphs]; };
   MF = derive2 { name="MF"; version="4.3.2"; sha256="1arnhyqf1cjvngygcpqk2g4d52949rhkjmclbaskyxcrvp62qln0"; depends=[]; };
   MFAg = derive2 { name="MFAg"; version="1.4"; sha256="092zbl2pxbsvfyf3qssbid14194p0ax2zrw0gzpyqwzdpx0brrlb"; depends=[]; };
   MFHD = derive2 { name="MFHD"; version="0.0.1"; sha256="0gb8y297y1x03wy46530psmlawyv4z5dydilk36qcmadlk1wx02k"; depends=[deldir depth depthTools fda_usc matrixStats]; };
   MFKnockoffs = derive2 { name="MFKnockoffs"; version="0.9.1"; sha256="1bcdqfzmllp3dri1phy365wgc9c37wlag65pzljn4p3mf43w10nq"; depends=[corpcor glmnet gtools Matrix Rdsdp RSpectra]; };
-  MFPCA = derive2 { name="MFPCA"; version="1.1"; sha256="1nbm8j9g36jqbalja5zcgkiy03i0pmr75hiqnhigxyy4dnp0wj4a"; depends=[abind foreach funData irlba Matrix mgcv plyr]; };
   MFT = derive2 { name="MFT"; version="1.3"; sha256="029apjg1fqrqfg98jczbxfy267m3f68qxvxqjzbsw1xisq4j7wc0"; depends=[]; };
-  MGGM = derive2 { name="MGGM"; version="1.0"; sha256="0j9wyshwxd7zqb60avb7dmfgnrzv2nyn983bw0g5997zixz0w6mp"; depends=[]; };
   MGL = derive2 { name="MGL"; version="1.1"; sha256="03q453swnangxyc4nvjhzw2zpcy5vp1wpilap5rwymnf0c0xi4j7"; depends=[]; };
-  MGLM = derive2 { name="MGLM"; version="0.0.8"; sha256="1yzi679jm7x9qkz0d3az84clkjfc7wjnxkk6n6s6ia4bnw05d5v7"; depends=[]; };
+  MGLM = derive2 { name="MGLM"; version="0.1.0"; sha256="06gaz82nn7fbfv7bm9xx6dsk95xq3gircvh6knzm963r1bw8f1pk"; depends=[]; };
   MGRASTer = derive2 { name="MGRASTer"; version="0.9"; sha256="0jmf2900r56v60981sabflkhid3yrqd9xd7crb56vgfl1qkva9zp"; depends=[]; };
   MGSDA = derive2 { name="MGSDA"; version="1.4"; sha256="0grwl740yvz2av5nkvmyyrr8ji5f39sjs1c5gxp6lp9p36i2wc32"; depends=[MASS]; };
   MHCtools = derive2 { name="MHCtools"; version="1.1.0"; sha256="03y6m3a46bzazxkrxdrii2p1fyc26il09z5676c63rk8wz9wcxa0"; depends=[rlist]; };
@@ -1922,13 +1958,14 @@ in with self; {
   MLDS = derive2 { name="MLDS"; version="0.4.5"; sha256="1a5y031kd6zx0zqlk6dvxzsv3isbvg9jap4gqad2jwryh0a9x3c1"; depends=[MASS]; };
   MLEcens = derive2 { name="MLEcens"; version="0.1-4"; sha256="0zlmrcjraypscgs2v0w4s4hm7qccsmaz4hjsgqpn0058vx622945"; depends=[]; };
   MLID = derive2 { name="MLID"; version="1.0.1"; sha256="0ygahmcfbydzic5q3h1ppv5b2ks4lh8mcyfqq27ssmn4g1n6hdvp"; depends=[lme4 nlme]; };
+  MLML2R = derive2 { name="MLML2R"; version="0.1.0"; sha256="11mnwmbfs3dmjcf2bmg04rivp26021gjd56rdkzgrv439p8aq8rs"; depends=[]; };
   MLPUGS = derive2 { name="MLPUGS"; version="0.2.0"; sha256="1yda37073g640g1qrkjrwa8hbyq6bjlcw3wpznx0bk5h0639bc0s"; depends=[]; };
   MLRMPA = derive2 { name="MLRMPA"; version="1.0"; sha256="0gfbi70b15ivv76l3i0zlm14cq398nlny40aci3vqxxd0m2lyyx5"; depends=[ClustOfVar]; };
   MLmetrics = derive2 { name="MLmetrics"; version="1.1.1"; sha256="061129b36h7xqw4zsznik694n8yy9qq6aaqfhdxkhdv8n5v1nzvp"; depends=[ROCR]; };
   MM = derive2 { name="MM"; version="1.6-2"; sha256="1z7i8ggd54qjmlxw9ks686hqgm272lwwhgw2s00d9946rxhb3ffi"; depends=[emulator magic Oarray partitions]; };
   MM2S = derive2 { name="MM2S"; version="1.0.5"; sha256="0h10cbsdnndllwq4cb4aamjy104ckvn01skh7rixa1iqdndac9fx"; depends=[GSVA kknn lattice pheatmap]; };
   MM2Sdata = derive2 { name="MM2Sdata"; version="1.0.1"; sha256="1prx0gm9shizj45382qhja417y18jp6spk2hmgrzb7sbniyqs5pd"; depends=[Biobase]; };
-  MMDai = derive2 { name="MMDai"; version="1.3.0"; sha256="1chxx06affmf6mqhnx3sni43pjwlp0q2gk3f5lxzbz5m5v81dx48"; depends=[DirichletReg]; };
+  MMDai = derive2 { name="MMDai"; version="1.4.0"; sha256="0bb7hg8fkmzg87xr1b2hxhy75xi461ks6w12z85k4c77kswfpx3b"; depends=[DirichletReg]; };
   MMMS = derive2 { name="MMMS"; version="0.1"; sha256="1a71vs3k16j14zgqfd4v92dq9swrb44n9zww8na6di82nla8afck"; depends=[glmnet survival]; };
   MMS = derive2 { name="MMS"; version="3.00"; sha256="06909912v2hr52s8k0a0830lbmdh05dcd7k47vydhbwq3rzf3ahg"; depends=[glmnet Matrix mht]; };
   MMWRweek = derive2 { name="MMWRweek"; version="0.1.1"; sha256="16dwmpj13rzxmd2x7xaakw2zq2aly7ajjbfnc39qvdzk6n2x37wn"; depends=[]; };
@@ -1936,7 +1973,7 @@ in with self; {
   MNP = derive2 { name="MNP"; version="3.1-0"; sha256="06qs2vsmjs6rcpqlwfc1n5y5hzxf7pngbdmiza1wijm9hh54ikh0"; depends=[MASS]; };
   MNS = derive2 { name="MNS"; version="1.0"; sha256="0if46a6rw0f2d72wnykkaa5z5b1p2c0r43il6cbwbcnnb3zd8acb"; depends=[doParallel glmnet igraph MASS mvtnorm]; };
   MOCCA = derive2 { name="MOCCA"; version="1.2"; sha256="04smpzn9x64w1vpw4szqa7dwnaak1ls6gpg7fgajs68mv5zivffa"; depends=[cclust clv]; };
-  MODIS = derive2 { name="MODIS"; version="1.1.0"; sha256="0a0gjncbh9dskbmvl5yzzg33jxvvfrsvc3axy1r5j5nfp3hb6zn6"; depends=[bitops devtools mapdata mapedit maps ptw raster RCurl rgdal sf sp XML]; };
+  MODIS = derive2 { name="MODIS"; version="1.1.2"; sha256="1iww1rnxv2xw63b5bz7xrxb3q8dmgqzbw704gshislkhjwn37q87"; depends=[bitops devtools mapdata mapedit maps maptools ptw raster RCurl rgdal rgeos sf sp XML]; };
   MODISSnow = derive2 { name="MODISSnow"; version="0.1.0.0"; sha256="1p0mil074gapw6v8paw9595rzp85hxrfsc65llh0ljalmacwgx04"; depends=[gdalUtils lubridate raster RCurl]; };
   MODIStsp = derive2 { name="MODIStsp"; version="1.3.3.1"; sha256="0685mrddw47428p61dw30yqdp5m0z2xh3rjfdrrdicfyx7kaii5m"; depends=[bitops data_table gdalUtils gWidgets gWidgetsRGtk2 hash httr pacman plyr raster RCurl rgdal rgeos RJSONIO sp stringr XML xts]; };
   MOEADr = derive2 { name="MOEADr"; version="1.1.0"; sha256="0q0bm13v85raq5hdfpzg4v5kj12zjh31fr1x0zv9g5blxy10dqgy"; depends=[assertthat FNN]; };
@@ -1949,6 +1986,7 @@ in with self; {
   MPDiR = derive2 { name="MPDiR"; version="0.1-16"; sha256="10g4dnysjnzf106qibqqcrxz3xw2nfh4ck1n1dlciwahr0f80j13"; depends=[]; };
   MPINet = derive2 { name="MPINet"; version="1.0"; sha256="1zw3piqhhpagg5qahc2xahxxfdwdk8w94aass1virlpl0f52ik8s"; depends=[BiasedUrn mgcv]; };
   MPLikelihoodWB = derive2 { name="MPLikelihoodWB"; version="1.1"; sha256="0xgj349jkv29ldia4lmsiwnkhrk99aqcrvyiy3si5knmi1jvx9q0"; depends=[MASS survival]; };
+  MPR_genotyping = derive2 { name="MPR.genotyping"; version="0.8"; sha256="0lsrbks7nhfnrmk8kclh09rc132j3divjxrzjfrg8zijbzkfx1pn"; depends=[qtl]; };
   MPSEM = derive2 { name="MPSEM"; version="0.3-3"; sha256="0ir1zlg0vz0nfdair3apa737dw4078lbxyk932755d3rj0cm20c3"; depends=[ape MASS]; };
   MPTinR = derive2 { name="MPTinR"; version="1.10.3"; sha256="0281w5dhg8wmi1rz80xribq437shp4m890c504kggsacr28mbhkw"; depends=[Brobdingnag numDeriv Rcpp RcppEigen]; };
   MPV = derive2 { name="MPV"; version="1.38"; sha256="1w3b0lszqmsz0yqvaz56x08xmy1m5ngl9m6p2pg9pjv13k8dv190"; depends=[]; };
@@ -1958,19 +1996,19 @@ in with self; {
   MRH = derive2 { name="MRH"; version="2.2"; sha256="1icwlq8js58g9fkiq7fwjg8r97ca47xl3dscnhnga99gkgsfgjwl"; depends=[coda KMsurv survival]; };
   MRMR = derive2 { name="MRMR"; version="0.1.4"; sha256="0dgbhlynaaka7mdzl6igwgcdzvy6cm2y8mbxaf9pfla8w3z8y0lq"; depends=[ggplot2 lmtest lubridate plyr reshape2]; };
   MRQoL = derive2 { name="MRQoL"; version="1.0"; sha256="0isn4g3jpz7wm99ymrshl6zgkb7iancdzdxl2w98n8fbxsh5z6sw"; depends=[]; };
-  MRS = derive2 { name="MRS"; version="1.2.2"; sha256="0l09jj8w8pyarmprfqkh993xz3s8753cy1niicfjvc5s8zs58idg"; depends=[igraph Rcpp RcppArmadillo]; };
+  MRS = derive2 { name="MRS"; version="1.2.4"; sha256="1sksg70zb72ys1b7vi8amjaqarmdh8vf2l1rb0rasrlvrip3z3br"; depends=[igraph Rcpp RcppArmadillo]; };
   MRSP = derive2 { name="MRSP"; version="0.4.3"; sha256="0zv22xiq3qh9x3r2ckkvq1vv0vkcirh8y87053bqvw1m20j7q1by"; depends=[Formula matrixcalc]; };
   MRTSampleSize = derive2 { name="MRTSampleSize"; version="0.1.0"; sha256="1f6ivr6cx4irqkry219x4nk6k5zhp3b19axy2xbfc3dx5zixhpjl"; depends=[]; };
   MRsurv = derive2 { name="MRsurv"; version="0.2"; sha256="148myzk6r8whkpv1yv59dmdlr2n8vdwmaww165aw696xfjxwq550"; depends=[mvtnorm survival]; };
   MRwarping = derive2 { name="MRwarping"; version="1.0"; sha256="13bcs7rlm4irx7yzdnib558w9014a4chh9xwc010m6pxvxv36qnv"; depends=[boa SemiPar]; };
   MSBVAR = derive2 { name="MSBVAR"; version="0.9-3"; sha256="0ybkkl3hfff2jgz4a0z105bb0v6jl4dkkqmdg382and8w0mc496c"; depends=[bit coda KernSmooth lattice mvtnorm xtable]; };
-  MSCMT = derive2 { name="MSCMT"; version="1.3.0"; sha256="0rwhfk6dh10zn1zgjamwx23j8i9kw1p6yzfgxj5ch7w3d3yzhrbf"; depends=[ggplot2 lpSolve lpSolveAPI Rdpack Rglpk]; };
+  MSCMT = derive2 { name="MSCMT"; version="1.3.2"; sha256="00s4wwggc70w6cg94ff853jnw5hcln6i0719n4xr92cpxaa7irnw"; depends=[ggplot2 lpSolve lpSolveAPI Rdpack Rglpk]; };
   MSG = derive2 { name="MSG"; version="0.3"; sha256="181kzkbw69bs3vir6dzgq7jzp8xcpg1p4isfb660vgnd1flb03ix"; depends=[RColorBrewer]; };
   MSGARCH = derive2 { name="MSGARCH"; version="2.0"; sha256="16mzsdb5dsbg5sjnmg1clqqy505wx87wgkwc3yzd0i6by681jwq6"; depends=[coda expm fanplot MASS numDeriv Rcpp RcppArmadillo zoo]; };
   MSGLasso = derive2 { name="MSGLasso"; version="2.1"; sha256="1k17vnvzr647pwfbdxrpqcsp34iygq86wf0ns4rq8cj6q5mik1bv"; depends=[]; };
   MSIseq = derive2 { name="MSIseq"; version="1.0.0"; sha256="1v2why1k6pjsc04044nr74571p7541nciq7xkzmya3jq6dw878j3"; depends=[IRanges R_utils rJava RWeka]; };
   MSQC = derive2 { name="MSQC"; version="1.0.2"; sha256="11wcy04cpjlnc71s2svs4lm1cp718dz1p4a1603x6zwpbf22bygn"; depends=[rgl]; };
-  MST = derive2 { name="MST"; version="2.0"; sha256="131c98lzy1cs1gbv20nv9r6yhlyyhk43hh1mrx12k1cgw299265k"; depends=[Formula MASS partykit survival]; };
+  MST = derive2 { name="MST"; version="2.1"; sha256="16mnsn2an02k4jrqb6yj0n1i563zny5v10ngfq1y28fqaw6h8yyq"; depends=[Formula MASS partykit survival]; };
   MSbox = derive2 { name="MSbox"; version="1.0"; sha256="0r6bvw7ddb8lvz5cjvcng9vkc6pn765xgd4bws594jyc0avm0jkx"; depends=[stringr]; };
   MScombine = derive2 { name="MScombine"; version="1.1"; sha256="0kgz1l4jlhcada3fp02dscf4zx6a22cjxj251838lfz65f512hrn"; depends=[plyr]; };
   MSeasy = derive2 { name="MSeasy"; version="5.3.3"; sha256="191mvg1imxfjlnd808ypn4lsjx7n6ydf16flax79hv01z7rcjylh"; depends=[amap cluster clValid fpc mzR xcms]; };
@@ -1984,7 +2022,7 @@ in with self; {
   MTurkR = derive2 { name="MTurkR"; version="0.8.0"; sha256="0q498chr2s67ai7lfxi6kdficqbs5sxj9asyv69z2a37fmsr4va7"; depends=[base64enc curl digest XML]; };
   MTurkRGUI = derive2 { name="MTurkRGUI"; version="0.1.5"; sha256="1rlgz80na0v1nx70cda1fzyswlb1lg5kcx64zl9dcqy6accsrpmp"; depends=[curl MTurkR XML]; };
   MUCflights = derive2 { name="MUCflights"; version="0.0-3"; sha256="03ksvv5nyzlqiml1nz405r3yqb2cl35kpm1h61zcv2nqq8cxqshs"; depends=[geosphere NightDay RSQLite sp XML]; };
-  MUS = derive2 { name="MUS"; version="0.1.4"; sha256="0h65gmxi65qax0qky7667p1jzi8y4pdncaa899d1nb0gvg9x0yh2"; depends=[]; };
+  MUS = derive2 { name="MUS"; version="0.1.5"; sha256="1vjfd9jhjs8llkqsdaynrlny93mb8y7wifg6cdjmnaq5fm9gyv9j"; depends=[]; };
   MVA = derive2 { name="MVA"; version="1.0-6"; sha256="09j9frr6jshs6mapqk28bd5jkxnr1ghmmbv6f4zz0lrg81zjizl3"; depends=[HSAUR2]; };
   MVB = derive2 { name="MVB"; version="1.1"; sha256="0an8b594rknlcz6zxjva6br8f34sgwdi2jil3xh1xzb5fa55dw0f"; depends=[Rcpp RcppArmadillo]; };
   MVLM = derive2 { name="MVLM"; version="0.1.4"; sha256="1zcj405dc4jbiqw6p0fcbam8yc9d6yjpmrx5wjw5zjvig3iqb91k"; depends=[CompQuadForm]; };
@@ -1995,7 +2033,7 @@ in with self; {
   MVisAGe = derive2 { name="MVisAGe"; version="0.2.0"; sha256="18w3qf85l81sbxhzxs61jbsng14lbd8vzvbprq0ywkxb2lsq16n2"; depends=[]; };
   MWLasso = derive2 { name="MWLasso"; version="1.3.1"; sha256="11lyk46lmjcd60q0mixi41b8ybjgyp1xi18g3ag4450xyhw3r17s"; depends=[]; };
   MWRidge = derive2 { name="MWRidge"; version="1.0.0"; sha256="17kvs9npr1ff24z3pv9x2qnfwyy6w3hc7hm60ynzbjlk2rr11xr9"; depends=[glmnet]; };
-  MXM = derive2 { name="MXM"; version="1.3.0"; sha256="0hjwv271qvqf6b3yb2hb1pss4ssf36gkwx9m3c9mb4c126iam8c7"; depends=[doParallel energy foreach hash lme4 MASS nnet ordinal quantreg relations Rfast speedglm survival visNetwork]; };
+  MXM = derive2 { name="MXM"; version="1.3.2"; sha256="0d3x773870ky6q36g6skcyfvywrwc264f5g55sh3229c6qpjgzq2"; depends=[doParallel energy foreach geepack hash lme4 MASS nnet ordinal quantreg relations Rfast survival visNetwork]; };
   MaXact = derive2 { name="MaXact"; version="0.2.1"; sha256="1n7af7kg54jbr09qk2a8gb9cjh25cnxzj2snscpn8sr8cmcrij0i"; depends=[mnormt]; };
   Maeswrap = derive2 { name="Maeswrap"; version="1.7"; sha256="0cnnr5zq7ax1j7dx7ira7iccqppc6qpdjghjarvdb2zj0lf69yyb"; depends=[geometry lattice rgl stringr]; };
   MagneticMap = derive2 { name="MagneticMap"; version="1.0"; sha256="1634bk6x92z01gyiy89c1g6z5cjsj8pf4f358y7rk2kppmfz4cf7"; depends=[scatterplot3d]; };
@@ -2008,10 +2046,10 @@ in with self; {
   MapGAM = derive2 { name="MapGAM"; version="1.0"; sha256="1hzv3sy2szxl4fhnnzlwagh3qm4z22cbhiwi8whgn5ymwlnw0pca"; depends=[gam maptools sp survival]; };
   MareyMap = derive2 { name="MareyMap"; version="1.3.4"; sha256="1wap0syzgd0w3xla2x4bcasn8zzlj63r5yyf9r479nvifjxdqxzz"; depends=[tkrplot]; };
   MarkowitzR = derive2 { name="MarkowitzR"; version="0.9900.0"; sha256="1wyqlgmb376dsvx7nixpbynjzp7xpmsh4fx9s7nai6fhjb50mxha"; depends=[gtools matrixcalc sandwich]; };
-  Massign = derive2 { name="Massign"; version="1.0.0"; sha256="08zxkic9r5l540lsswv15fcrkdfigjs9ajy5gs63xxgmnsxj25bp"; depends=[]; };
+  Massign = derive2 { name="Massign"; version="1.1.0"; sha256="09i32lsrx40rxrnb9alfipfrkipy4mza5nr4gcpn2a5h86ak9290"; depends=[]; };
   MasterBayes = derive2 { name="MasterBayes"; version="2.55"; sha256="14532l41x5k3z2qg0vklafqyzmn45qny9hlrrgriykajv3xjf2lz"; depends=[coda genetics gtools kinship2]; };
-  MatManlyMix = derive2 { name="MatManlyMix"; version="0.1.2"; sha256="08iny27gsf89r7c938nx8pmkivkiyrsq7za9ijamz61cf4kyawcl"; depends=[]; };
-  MatchIt = derive2 { name="MatchIt"; version="3.0.1"; sha256="0iifn286ssdavpg3ajlmd5z7n5wn0rsj3l23xf6qnvij35k95kbw"; depends=[MASS Matching rgenoud]; };
+  MatManlyMix = derive2 { name="MatManlyMix"; version="1.1.1"; sha256="1d2vd5b9lirdybjclxh0nn4mghq64qjj4l8vnj95cni5pfa18a2c"; depends=[]; };
+  MatchIt = derive2 { name="MatchIt"; version="3.0.2"; sha256="1pp91pw2sy9hik4sgn4gcsp40hb01n9pfccrwdcffwji5fd1aavq"; depends=[MASS Matching]; };
   MatchItSE = derive2 { name="MatchItSE"; version="1.0"; sha256="01ghv3hdlsx6ypvsh7k0mi20yc8vg7z602mhcprhhh97qsb81v6h"; depends=[Rcpp RcppArmadillo]; };
   MatchLinReg = derive2 { name="MatchLinReg"; version="0.7.0"; sha256="015s3xdaj56prq8lsdry3ibjkrb6gg0fwgzjh496gdx5axvpbk8g"; depends=[Hmisc Matching]; };
   Matching = derive2 { name="Matching"; version="4.9-2"; sha256="0lv5b41l797c4bl2rzmdqzjnn47zpvvcv3md3xwxvvz5knxky5x4"; depends=[MASS]; };
@@ -2019,53 +2057,52 @@ in with self; {
   Matrix = derive2 { name="Matrix"; version="1.2-12"; sha256="1wm45hg4x5ay15y03k6rmgkd1n9r01da72mszk24vafwd7pimr8n"; depends=[lattice]; };
   Matrix_utils = derive2 { name="Matrix.utils"; version="0.9.6"; sha256="0aa225y6vqm0dqjfppfrc43wbq3ks9aszhmy73xbai2v12sh439g"; depends=[grr Matrix]; };
   MatrixCorrelation = derive2 { name="MatrixCorrelation"; version="0.9.2"; sha256="0s4gxgl6fsy0fnjmsdz4k7p96vl6p00xl9w2fg7v0gikjpz6h5bg"; depends=[plotrix pracma progress Rcpp RcppArmadillo RSpectra]; };
-  MatrixEQTL = derive2 { name="MatrixEQTL"; version="2.1.1"; sha256="1bvfhzhvm1psgq51kpjcpp7bidaxcrxdigmv6abfi3jk5kyzn5ik"; depends=[]; };
+  MatrixEQTL = derive2 { name="MatrixEQTL"; version="2.2"; sha256="1205jxx5aj783r2dmpawiq4rr30b60fq1qf053i7wylw07pz6vba"; depends=[]; };
   MatrixLDA = derive2 { name="MatrixLDA"; version="0.1"; sha256="19q6wl8fc6jzn7544qnlpzfh9v0xlg9cr78l6k8kx6kzjnbnyh9z"; depends=[glasso plyr Rcpp RcppArmadillo]; };
   MatrixModels = derive2 { name="MatrixModels"; version="0.4-1"; sha256="0cyfvhci2p1vr2x52ymkyqqs63x1qchn856dh2j94yb93r08x1zy"; depends=[Matrix]; };
   MaxPro = derive2 { name="MaxPro"; version="3.1-2"; sha256="1y2g8a8yvzb24dj0z82nzfr6ylplb9sbi2dmj7f3pb4s3yr5zm8y"; depends=[nloptr]; };
   MaxSkew = derive2 { name="MaxSkew"; version="1.1"; sha256="0x5x0jpvhp189jnmgh6d1h3ya0dicj5qfcrgr2fhp1v8jjhl125m"; depends=[]; };
-  MazamaSpatialUtils = derive2 { name="MazamaSpatialUtils"; version="0.5.1"; sha256="1c5lba3v7agl6wvgnr7af3raxpl9jaffk0ri20jn3gn5mq3bpjrk"; depends=[dplyr lubridate rgdal rgeos rmapshaper rvest sp stringr xml2]; };
-  MazamaWebUtils = derive2 { name="MazamaWebUtils"; version="0.1.4"; sha256="06k6jgqnvx67k132y54n44fmlyfq9wsj9n1xdgs6zv8mwmdcwp6l"; depends=[dplyr futile_logger stringr webutils]; };
+  MaxentVariableSelection = derive2 { name="MaxentVariableSelection"; version="1.0-3"; sha256="1cmxfdkm5k85b4ivlfy5521hkfj0gq2pb1qlxxklh0fprw87kp9c"; depends=[ggplot2 raster]; };
+  MazamaSpatialUtils = derive2 { name="MazamaSpatialUtils"; version="0.5.2"; sha256="0k64yzn7qnjxkxxqg5yrgq1ksdp37qfx0yc8a2n1zrdwj9f9ba2i"; depends=[dplyr lubridate rgdal rgeos rmapshaper rvest sp stringr xml2]; };
+  MazamaWebUtils = derive2 { name="MazamaWebUtils"; version="0.1.5"; sha256="065l1n2nr5jsc0mdlxj10plzp8m09025hzbd8if3pn6gsl520b6l"; depends=[dplyr futile_logger stringr webutils]; };
   McSpatial = derive2 { name="McSpatial"; version="2.0"; sha256="18nmdzhszqcb5z9g8r9whxgsa0w3g7fk7852sgbahzyw750k95n4"; depends=[lattice locfit maptools quantreg RANN SparseM]; };
-  Mcomp = derive2 { name="Mcomp"; version="2.6"; sha256="01m2kawkxs9k7va3bvv7bknl4y13rhy8zczc093f10msgy6nqncl"; depends=[forecast ggplot2]; };
+  Mcomp = derive2 { name="Mcomp"; version="2.7"; sha256="1bv88z0cy2ark9i8wggxj101bygpsfkaxql5k0g7m90jlq8b4xr1"; depends=[forecast ggplot2]; };
   MeanShift = derive2 { name="MeanShift"; version="1.1-1"; sha256="02zf27xvk2zlmgxfyl5pwl2rdq8c30fb52x1mbpvlhmxjbhg6fsn"; depends=[wavethresh]; };
   MedDietCalc = derive2 { name="MedDietCalc"; version="0.1.0"; sha256="1gggia97ww4kiqhh2lnsmadgdxvpr36mdx1yrbgarj0sp6ilrd3l"; depends=[]; };
   MedOr = derive2 { name="MedOr"; version="0.1"; sha256="1rwc14s16lnzgb78ac2017hv9pss7zw7nw3y7vrvq1qx4fgiw6f8"; depends=[]; };
   MediaK = derive2 { name="MediaK"; version="1.0"; sha256="19cmxl2wksw9kvjsfn1m4nkr5gpcx6bk0sqrabj1n0dla1l32v2a"; depends=[Rcpp RcppEigen]; };
-  Mediana = derive2 { name="Mediana"; version="1.0.5"; sha256="1hxla0678ilwkm27pxz97794hxz2qxhw557swskhvnybcxq80752"; depends=[doParallel doRNG foreach MASS mvtnorm ReporteRs survival]; };
+  Mediana = derive2 { name="Mediana"; version="1.0.6"; sha256="0cx2bkz5m96dirqknfsi9944rhnn14wwdimw1hq1p8c073z40i7a"; depends=[doParallel doRNG foreach MASS mvtnorm survival]; };
   Mega2R = derive2 { name="Mega2R"; version="1.0.0"; sha256="1rprbn7pkp0haahf34d1w7pmzn6hv8ci93gfp68hpyxxi6qm61g0"; depends=[AnnotationDbi DBI GenABEL GenomeInfoDb pedgene Rcpp RSQLite SKAT]; };
-  Meiosis = derive2 { name="Meiosis"; version="1.0.2"; sha256="1qjn3017xi6js75b9wq7vp6ail5dpbacraj1my3icaggdcbjc45g"; depends=[BH Rcpp]; };
   MendelianRandomization = derive2 { name="MendelianRandomization"; version="0.2.2"; sha256="0hwmixcby68a6p6vrq0jy9g6ky26q94haz7m9drzf50zzkv5df0g"; depends=[ggplot2 knitr plotly rmarkdown robustbase stargazer]; };
   MenuCollection = derive2 { name="MenuCollection"; version="1.2"; sha256="0v3flicfnln9qld150yk3rfldvsr4dllhq80l02n1lq6px38nf2s"; depends=[gplots RGtk2 RGtk2Extras]; };
   MergeGUI = derive2 { name="MergeGUI"; version="0.2-1"; sha256="1hx03qv5jyjjmqdvylc3kz5dl5qsdqwlirjbrnxrw7grkgkhygap"; depends=[cairoDevice ggplot2 gWidgetsRGtk2 rpart]; };
   MetABEL = derive2 { name="MetABEL"; version="0.2-0"; sha256="0rqjv85mgswrbbp8b8ip6cdmz0cvfy9lm5mcr8a7h38rzgx3g3i3"; depends=[]; };
-  MetFns = derive2 { name="MetFns"; version="3.1.0"; sha256="1zk7mrw9yxhwj19whq1055rmf27kf41pl7x2dvjjld1rs0mny3ii"; depends=[astroFns lubridate plotrix pracma]; };
+  MetFns = derive2 { name="MetFns"; version="3.2.0"; sha256="1nm7yv0cl0kl9dn284fja8a9lf77a2xaqv6v53b2f9sravj5pkfv"; depends=[astroFns lubridate plotrix pracma]; };
   MetNorm = derive2 { name="MetNorm"; version="0.1"; sha256="0vfi3k0yp2dz47gwj1n1avs3ji0a2nlrrljz5d0l66zfh4474jb4"; depends=[]; };
   MetProc = derive2 { name="MetProc"; version="1.0.1"; sha256="1z6538pij1rq5wv9s8rjcn0sck15y26asv4vamav8a6s4135ia3q"; depends=[fastcluster gplots]; };
   MetSizeR = derive2 { name="MetSizeR"; version="1.1"; sha256="11hdmpvnszr6pn9ihb3zjy9miksz1fs4piry153z4dic8pjydkax"; depends=[cairoDevice gWidgets gWidgetsRGtk2 MetabolAnalyze mvtnorm]; };
   MetStaT = derive2 { name="MetStaT"; version="1.0"; sha256="0400gx6i8xlkm51da98ap91c3hgrkgfgxswn0plaxfry3625khkp"; depends=[abind MASS pls]; };
   MetaAnalyser = derive2 { name="MetaAnalyser"; version="0.2.1"; sha256="0k58325nb7svihhpga7kdbryr9bi5470qsb8aa5llpiggs8j7sfz"; depends=[DT ggvis rstudioapi shiny]; };
-  MetaComp = derive2 { name="MetaComp"; version="1.0.1"; sha256="11h0b62c54vgvdnxfjg233ripyfpi4b1d9lkpkc09d8jifhbga7q"; depends=[Cairo data_table dplyr ggplot2 plyr reshape2]; };
+  MetaComp = derive2 { name="MetaComp"; version="1.1.1"; sha256="0ndnjpg0c9k4171n190qwxmy79kw2ax4y5ap4xvaf0x561p072l6"; depends=[Cairo data_table dplyr ggplot2 plyr reshape2]; };
   MetaCycle = derive2 { name="MetaCycle"; version="1.1.0"; sha256="1kzdk21xpbvwibs8501zwdb9lzj7g5nv2zqaskg9x0szshhg8vpp"; depends=[gnm]; };
-  MetaDE = derive2 { name="MetaDE"; version="1.0.5"; sha256="1ijg64bri5jn2d3d13q1gvvfyqmbh6gn0lk6dkihixf0jwvjdyqi"; depends=[Biobase combinat impute survival]; };
   MetaIntegrator = derive2 { name="MetaIntegrator"; version="1.0.3"; sha256="0611k497ixy0f51lmqzs08zqqq5krrxrm7m0xqdl18gkwrw3w656"; depends=[Biobase DBI GEOmetadb GEOquery ggplot2 gplots multtest preprocessCore reshape rmeta Rmisc RMySQL RSQLite stringr]; };
-  MetaLandSim = derive2 { name="MetaLandSim"; version="0.5.6"; sha256="1hrgq15qgi26qdiz9iwkhf98nlzx86d3980z717w3gl1yr3i9kal"; depends=[e1071 fgui googleVis igraph maptools minpack_lm raster rgeos rgrass7 sp spatstat zipfR]; };
-  MetaLonDA = derive2 { name="MetaLonDA"; version="1.0.5"; sha256="08f40d0wpmi7nxvmfanzavagk2x239gwkzwdxi2nbwncpidvkm94"; depends=[caTools DESeq2 doParallel edgeR ggplot2 gss metagenomeSeq plyr]; };
+  MetaLandSim = derive2 { name="MetaLandSim"; version="1.0.1"; sha256="1m7h1bdk172zjx7xxlh4lac17ndx28vjpvdkyb352j5f4r4aq09g"; depends=[coda e1071 fgui googleVis igraph knitr maptools minpack_lm raster rgeos rgrass7 sp spatstat zipfR]; };
+  MetaLonDA = derive2 { name="MetaLonDA"; version="1.0.9"; sha256="1iy7p91ln48fhym7gna8xmqrva6fcwxapqcyh1h6hqr0h3j392qd"; depends=[caTools DESeq2 doParallel edgeR ggplot2 gss metagenomeSeq plyr]; };
   MetaPCA = derive2 { name="MetaPCA"; version="0.1.4"; sha256="14g4v3hyxnds4l2q36mpz282yqg8ahgdw3b0qmj0xg17krrf5l2s"; depends=[foreach]; };
   MetaPath = derive2 { name="MetaPath"; version="1.0"; sha256="1vvpfv6yc4rd4apqfs2yzm97xxsv43ghwqnjq6w1xrc4pdx2p634"; depends=[Biobase genefilter GSEABase impute]; };
   MetaQC = derive2 { name="MetaQC"; version="0.1.13"; sha256="11595ggjr46z6xiwmhiyx1sydaq68l18y7mgdwxsg81g03ck9x1r"; depends=[foreach iterators proto]; };
   MetaSKAT = derive2 { name="MetaSKAT"; version="0.60"; sha256="13qffirv0lnj0bflzjpr2hd0d8j4bkakyfjvicp40f0v4v3cack2"; depends=[SKAT]; };
-  MetaSubtract = derive2 { name="MetaSubtract"; version="1.2"; sha256="1alp28j8i4aga6134ls2a3j2c7rdndjg88gqn1slkjn4qzqb0bvk"; depends=[]; };
+  MetaSubtract = derive2 { name="MetaSubtract"; version="1.3"; sha256="0z7l666n3whfs5zqjqlq1aa10f1h4mv1di0alksllkijfi6pcnzq"; depends=[]; };
   MetaboList = derive2 { name="MetaboList"; version="1.2"; sha256="15wkj29s1mxi1wzqzlh8lkr5jkw15dbc37h3hzsc0r72a3ddzf38"; depends=[enviPick]; };
   MetaboQC = derive2 { name="MetaboQC"; version="1.0"; sha256="1hm0ndwda1ciyyg8igkpaalvvdyd7aq5wnl9gzza8fr1l9fxp4a2"; depends=[plyr]; };
   MetabolAnalyze = derive2 { name="MetabolAnalyze"; version="1.3"; sha256="0cl76x6imx4a95wd74xx5s8i2vg8wq3inqgakvgzmkwxad6qhrqp"; depends=[ellipse gplots gtools mclust mvtnorm]; };
   MetaheuristicFPA = derive2 { name="MetaheuristicFPA"; version="1.0"; sha256="096k866mgrdgj55rzvdj080z80hzlj0667mydpz7gjaqdfriw8jg"; depends=[Rcpp RcppArmadillo]; };
+  MetamapsDB = derive2 { name="MetamapsDB"; version="0.0.2"; sha256="0y5szb52karxcqr1f9mb050awprbk1ynckr987aw3d4ia6i9gcif"; depends=[base64enc cluster data_table DBI dplyr forcats future GenomicRanges ggplot2 gridExtra httr igraph IRanges lubridate magrittr Matrix purrr RCurl rgexf RJSONIO RSQLite shiny ShortRead stringr tidyr zoo]; };
   Metatron = derive2 { name="Metatron"; version="0.1-1"; sha256="0apz2k3za19px1bcg4ls0axaljrpxnqhs86b6s862c370sspc1x8"; depends=[lme4 Matrix mpt]; };
   Meth27QC = derive2 { name="Meth27QC"; version="1.1"; sha256="0ad30svs2kjzmmyvcm0jmv64iyq7slp1x1xl35h2rv1b6zbd4658"; depends=[gplots]; };
   MethComp = derive2 { name="MethComp"; version="1.22.2"; sha256="0f9l36d00x054yqgbw0dckc7ldlgap6vnbb03n6n5yz47xxg0ic3"; depends=[nlme]; };
   MethodCompare = derive2 { name="MethodCompare"; version="0.1.0"; sha256="0zl20v8k8bhn3skbpzdiglywrqghwf0r42q2jn8zmq4x0drvjzpl"; depends=[nlme]; };
   Methplot = derive2 { name="Methplot"; version="1.0"; sha256="0aaqss9zfn55qi45jffxkksnkw510npjnkygafx49vl77bkagqh5"; depends=[ggplot2 reshape]; };
-  MethyBayes = derive2 { name="MethyBayes"; version="0.1.0"; sha256="1ibjmnfx3d2hw6gjcyig6kv4q7p26am2xvj14ksjv9kglw2q4g1b"; depends=[]; };
   MethylCapSig = derive2 { name="MethylCapSig"; version="1.0.1"; sha256="16ch9aldr6a9jn42h387n7qvnzs0yx28f2yj6xq0kp476q7rf4ql"; depends=[geepack]; };
   Metrics = derive2 { name="Metrics"; version="0.1.3"; sha256="1mpqbi1lihxgndfpm8b6c5hiibvnscz1b5xjgi16x2fqk3cz4i0z"; depends=[]; };
   MfUSampler = derive2 { name="MfUSampler"; version="1.0.4"; sha256="0i5siq1jacxbfvakb97qnj3h7pk471rrx8ckwm0d8nl3j586s36y"; depends=[ars coda HI]; };
@@ -2081,12 +2118,12 @@ in with self; {
   MigClim = derive2 { name="MigClim"; version="1.6"; sha256="171pnalidyw0v2fcjdc3kyrq5kg035kwj5xl8zwgn3hlanpaljvp"; depends=[raster SDMTools]; };
   MindOnStats = derive2 { name="MindOnStats"; version="0.11"; sha256="13995v4n0hfb53w02jk81pl7nazkvqwwv87y1sr99jr9ppzc08mz"; depends=[]; };
   Miney = derive2 { name="Miney"; version="0.1"; sha256="0sgln0653rgglinr8rns5s2az0lgyp9slmynyhhhs265grkhrfj0"; depends=[]; };
+  Miso = derive2 { name="Miso"; version="0.1.1"; sha256="151klf07k5f670ssclg6bba18vfamyclz1sq3x0l9bzdvkng0lak"; depends=[S4Vectors]; };
   MissMech = derive2 { name="MissMech"; version="1.0.2"; sha256="1b7i1balfl1cqr3l4l4wxlahk2gmawzv9rhyibwzf0yp60cb1sv9"; depends=[]; };
   MissingDataGUI = derive2 { name="MissingDataGUI"; version="0.2-5"; sha256="0drbm87ka17avg6fmswjilgnz9c3azwd0236s8yfms24k9k77vnd"; depends=[cairoDevice GGally ggplot2 gWidgetsRGtk2 reshape]; };
   MitISEM = derive2 { name="MitISEM"; version="1.2"; sha256="0dn398vrxh16gmy7ghh5000dgk7cbhb3gi3myrxp5dfri3ysjxcj"; depends=[mvtnorm]; };
   MittagLeffleR = derive2 { name="MittagLeffleR"; version="0.2.0"; sha256="1r6hamc4vanxdbmp37ib20drw49c4vxkskqb93qlagaqxgr9xch0"; depends=[stabledist]; };
-  MixAll = derive2 { name="MixAll"; version="1.2.0"; sha256="09wwisdwgvcsnvb9jdr0p0gyai5ab06yjyqhac1i7jg6wa2r8m3g"; depends=[Rcpp rtkore]; };
-  MixGHD = derive2 { name="MixGHD"; version="2.1"; sha256="0f3ppj18acvr35dbgqibmpd58cymq3baw3jdrl4ranlk0nj6h26r"; depends=[Bessel cluster e1071 ghyp MASS mixture mvtnorm numDeriv]; };
+  MixGHD = derive2 { name="MixGHD"; version="2.2"; sha256="1cq6mar6h56nscnd7xs6spf45mlqp48lssw2i57zfvi75f6s70p4"; depends=[Bessel cluster e1071 ghyp MASS mixture mvtnorm numDeriv]; };
   MixMAP = derive2 { name="MixMAP"; version="1.3.4"; sha256="0gxghym5ghbyxf589hda2fhv5l3x5jvm6i40x5xdwx4hadcn8k9a"; depends=[lme4]; };
   MixRF = derive2 { name="MixRF"; version="1.0"; sha256="1av1wx7wmfc3z8a4bc6g3i3b807nc28n3s2rs3yh0rcwq1pfl0ir"; depends=[doParallel foreach lme4 randomForest]; };
   MixSIAR = derive2 { name="MixSIAR"; version="3.1.7"; sha256="0myn50sdmp83bhzm66sa61xwxv3lka427mv1ynhqshaqrb5flj35"; depends=[coda compositions ggmcmc ggplot2 lattice MASS R2jags RColorBrewer reshape reshape2 rjags]; };
@@ -2098,7 +2135,7 @@ in with self; {
   MixtureInf = derive2 { name="MixtureInf"; version="1.1"; sha256="12qcflmrpzh4w5b40xq5qicks6p0cwqpf5k84pwabkjb168afddv"; depends=[quadprog]; };
   MixtureRegLTIC = derive2 { name="MixtureRegLTIC"; version="1.0.0"; sha256="052gyk4gqv49fa2rxbxnib29f1vjxiw4q8llkfhsv8kw5pw38699"; depends=[]; };
   MlBayesOpt = derive2 { name="MlBayesOpt"; version="0.3.3"; sha256="0aazcf94gckgxd51r21hv3msa18br5xcq8xp03w448di546qzbnn"; depends=[data_table dplyr e1071 foreach Matrix ranger rBayesianOptimization rlang xgboost]; };
-  MoEClust = derive2 { name="MoEClust"; version="1.0.0"; sha256="0xnhf1d9mqrym3xh2dmn2bl4mpf1r7c7924dbi9r1v9zx81myjwb"; depends=[lattice matrixStats mclust mvnfast nnet vcd]; };
+  MoEClust = derive2 { name="MoEClust"; version="1.1.0"; sha256="1442x2ajiib1fgj6bc3zlqy9q3bjnhnn29f7fjin99lq7c5r132p"; depends=[lattice matrixStats mclust mvnfast nnet vcd]; };
   MoLE = derive2 { name="MoLE"; version="1.0.1"; sha256="0bq19vwqjn5hl4mw5imkydbp39gal992vnh2dwrq8bb8cmj3qh91"; depends=[]; };
   MoTBFs = derive2 { name="MoTBFs"; version="1.0"; sha256="09ymfgw6psc1y0dczvsrsw5cki58wn0d8vj56ydfylrxn24g3jfq"; depends=[bnlearn lpSolve quadprog]; };
   Mobilize = derive2 { name="Mobilize"; version="2.16-4"; sha256="16vdvpwspa0igb52zvzyk0if9l4wq1hm8y42572i8sh1m82wyyfs"; depends=[ggplot2 Ohmage reshape2 wordcloud]; };
@@ -2107,24 +2144,27 @@ in with self; {
   ModelMap = derive2 { name="ModelMap"; version="3.3.5"; sha256="1rmm1a2nw91kzvxpvq9qhlag0dhihis7mgscgslqia6z8fr86qvs"; depends=[corrplot fields HandTill2001 mgcv PresenceAbsence randomForest raster rgdal]; };
   ModelMetrics = derive2 { name="ModelMetrics"; version="1.1.0"; sha256="119xxmzb5biq7k1yxqsf0jmmarmfn6lds9x9hfgv593xlpym6za8"; depends=[Rcpp]; };
   Modeler = derive2 { name="Modeler"; version="3.4.2"; sha256="0zf3z3y4w1jixmcbhkgrjh4dx7x3bfi66hrbzsxyfp7abk0p2d6l"; depends=[class ClassComparison ClassDiscovery e1071 neuralnet nnet oompaBase randomForest rpart TailRank]; };
+  MomTrunc = derive2 { name="MomTrunc"; version="1.41"; sha256="0az499xzvnczqnbh4g3h5jyz8isq0zdw0x654haac6v6045f5xav"; depends=[matrixcalc mvtnorm]; };
   Momocs = derive2 { name="Momocs"; version="1.2.2"; sha256="1a4y4zg9zd0pmhcjwvi5k1x36lyl1cw5i6bfm9qphd5bm438n70y"; depends=[ape dplyr geometry geomorph ggplot2 jpeg magrittr MASS plyr reshape2 sp]; };
   Mondrian = derive2 { name="Mondrian"; version="1.0-0"; sha256="07r64q518diphai951pw4vfaw4sd6bqwhi6q5cp4pcl3aqjynkmj"; depends=[RColorBrewer]; };
   MonetDB_R = derive2 { name="MonetDB.R"; version="1.0.1"; sha256="1r7vki0rrzwcrfg4f2lfx30g614vf2xi62qb1rs21a9j5741lxlx"; depends=[codetools DBI digest]; };
-  MonetDBLite = derive2 { name="MonetDBLite"; version="0.5.0"; sha256="0p6d2ii1nvlmhfk94nh5ayxmjq90fcipisq3q4nv0kkf04pgvypl"; depends=[codetools DBI digest]; };
+  MonetDBLite = derive2 { name="MonetDBLite"; version="0.5.1"; sha256="01gcwr5r47dkmr1y2q387xv1qr2fryq9574aijx1a39ywhvcm8pq"; depends=[codetools DBI digest]; };
   MonoInc = derive2 { name="MonoInc"; version="1.1"; sha256="14rykw3bfj0vznz0rw4vsg1k4vanfv9cy867vspw966ncl4bw70h"; depends=[compare doParallel foreach iterators sitar]; };
   MonoPhy = derive2 { name="MonoPhy"; version="1.2"; sha256="0997kg8hfwgsc9s155z0wrf7rrhn3vf6681j9psjl3hsspg08z2r"; depends=[ape phangorn phytools RColorBrewer taxize]; };
-  MonoPoly = derive2 { name="MonoPoly"; version="0.3-8"; sha256="1dd2m4c726j94cxwsma33sc166c9656m7sl2b29bg6i0bmpvpmd2"; depends=[quadprog]; };
+  MonoPoly = derive2 { name="MonoPoly"; version="0.3-9"; sha256="130hv05fwsskk1bvr7fk8bmafq26vimkfgssjdk3zaz0hm3pxrp4"; depends=[quadprog]; };
   MonteCarlo = derive2 { name="MonteCarlo"; version="1.0.2"; sha256="1lb5cvly7v45kn24m8pyfw036b8j7lq4my0igaj859r74ky3knw9"; depends=[abind codetools rlecuyer snow snowfall]; };
   Morpho = derive2 { name="Morpho"; version="2.5.1"; sha256="1cxxsg7j0fq9drxkl6xlaw7j2cajzx9khcs9f3mb9l2ixd42hqnp"; depends=[colorRamps doParallel foreach MASS Matrix Rcpp RcppArmadillo rgl Rvcg]; };
   MorseGen = derive2 { name="MorseGen"; version="1.2"; sha256="1kq35n00ky70zmxb20g4mwx0hn8c5g1hw3csmd5n6892mbrri8s9"; depends=[]; };
-  MortalityLaws = derive2 { name="MortalityLaws"; version="1.0.5"; sha256="1mb78kg8v3556zkk3pr9dd5xl5v63m9gcw9s8r17msx59w9w25cg"; depends=[minpack_lm pbapply RCurl]; };
+  MortCast = derive2 { name="MortCast"; version="1.1-1"; sha256="077kk08pckm07rh7vxiw8whiyc4fbsj3qihih6mg09slaq8zr825"; depends=[wpp2017]; };
+  MortHump = derive2 { name="MortHump"; version="0.2"; sha256="1yhrdcwqf27v22mrysh51m3jcrnf74x21x7db25nic8q8fdmchj2"; depends=[demography HMDHFDplus Matrix minpack_lm MortalitySmooth RColorBrewer svcm WeightedCluster]; };
+  MortalityLaws = derive2 { name="MortalityLaws"; version="1.3.0"; sha256="1db4p7kl3kh3kdzqbbvyj3zxv6pz0jnc9fl7j2590ajwd5m9crg4"; depends=[minpack_lm pbapply RCurl]; };
   MortalitySmooth = derive2 { name="MortalitySmooth"; version="2.3.4"; sha256="1clx8gb8jqvxcmfgv0b8jyvh39yrmcmwr472j9g3ymm95m4hr8fq"; depends=[lattice svcm]; };
   MotilityLab = derive2 { name="MotilityLab"; version="0.2-5"; sha256="080j548sp1c4yqqd7p7zgr70j1xyrw3fgjj1f521sgh84x5h2hbc"; depends=[ellipse]; };
-  MplusAutomation = derive2 { name="MplusAutomation"; version="0.7"; sha256="0xnipvfib16ycxglqnr5x0h19km0sw966w1xhaxw2ii6cm82ks0l"; depends=[boot coda digest gsubfn lattice pander plyr texreg xtable]; };
+  MplusAutomation = derive2 { name="MplusAutomation"; version="0.7-1"; sha256="1f6gd227pkcs0sa9bwng0m617pjv3b0dm6rsij06a4n2gp50aysw"; depends=[boot coda digest gsubfn lattice pander plyr texreg xtable]; };
   Mposterior = derive2 { name="Mposterior"; version="0.1.2"; sha256="16a7wvg41ld2bhbss480js5h12r41nl7jmc3y4jsbv1lr5py4ymy"; depends=[Rcpp RcppArmadillo]; };
   MsdeParEst = derive2 { name="MsdeParEst"; version="1.7"; sha256="1zhi1jr30sl7jpsw37lc3akfzixlhm9k2hjkha1pjy5fmd5lddlx"; depends=[MASS moments mvtnorm sde]; };
   MuFiCokriging = derive2 { name="MuFiCokriging"; version="1.2"; sha256="09p8wdmlsf21ibqyjigwdipcin3ij0naxcd035hqgfj76v20wiyv"; depends=[DiceKriging]; };
-  MuMIn = derive2 { name="MuMIn"; version="1.40.0"; sha256="1vzziq8nczclsyf2a96rh32xk77k5bvgbk653b8133566m40ygw1"; depends=[Matrix]; };
+  MuMIn = derive2 { name="MuMIn"; version="1.40.4"; sha256="1xw7b74qg0ivgk3l1krjn2wrl969c41hr0y2nk0z8fw94xcfggyr"; depends=[Matrix]; };
   MuViCP = derive2 { name="MuViCP"; version="1.3.2"; sha256="1wkiwdz4bblxf1zr57khljqkga9ks9aj1lnidvmhib94q6b8fnf4"; depends=[gtools MASS sm]; };
   MullerPlot = derive2 { name="MullerPlot"; version="0.1.2"; sha256="0am5brdmbh2mw74fbw9nha6h4qlhj8psg3142mql1ad99bd0zg4w"; depends=[RColorBrewer]; };
   MultAlloc = derive2 { name="MultAlloc"; version="1.2"; sha256="0c3sqfaa08s8mk4yz77kh6q6v9ic5xp52g9prfw1k2kv4nw1k2qd"; depends=[Rglpk]; };
@@ -2136,14 +2176,16 @@ in with self; {
   MultiGHQuad = derive2 { name="MultiGHQuad"; version="1.2.0"; sha256="00prkn5awxrh365j1jz312har1x4p8v52a0sqfy00pqr44ncmqqq"; depends=[fastGHQuad Matrix mvtnorm]; };
   MultiLCIRT = derive2 { name="MultiLCIRT"; version="2.11"; sha256="1qls0qp5fz377h50lvpzq3vkw49i3nvizli98gss50nqci8ssqm4"; depends=[limSolve MASS]; };
   MultiMeta = derive2 { name="MultiMeta"; version="0.1"; sha256="0gj0wk39fqd21xjcah20jk16jlfrcjarspbjk5xv74c9k4p5gmak"; depends=[expm ggplot2 gtable mvtnorm reshape2]; };
-  MultiOrd = derive2 { name="MultiOrd"; version="2.2"; sha256="0j7zl6a2yxiixxjrhwrp5z4wdi04fqc8qfq2hp0q02k28dzjg1g1"; depends=[corpcor Matrix mvtnorm psych]; };
+  MultiOrd = derive2 { name="MultiOrd"; version="2.3"; sha256="157bsd5x3cw2yyv5y1hccpn7v42lqf99w09m6kdm0rxnhgjm8k1v"; depends=[corpcor Matrix mvtnorm psych]; };
   MultiPhen = derive2 { name="MultiPhen"; version="2.0.2"; sha256="095avrxxi5q5nwi5kd6drz9az5fjq668my7z658mjdf3fl58csjm"; depends=[abind epitools gplots HardyWeinberg MASS meta RColorBrewer]; };
-  MultiRNG = derive2 { name="MultiRNG"; version="1.0"; sha256="1h6yq39fjl7yg91z9kg9qhq36371xq85fzjip4fw8hnblwhns5n9"; depends=[]; };
+  MultiRNG = derive2 { name="MultiRNG"; version="1.1"; sha256="1kljkxwl0ym0dzvhvj2jqkp8077wdgkcqfi3m4zrjcxdblzjmm00"; depends=[]; };
   MultiRR = derive2 { name="MultiRR"; version="1.1"; sha256="1jrhx3nlqwsv3i6r8fs142llw88qad41rsh0sj1pv1gb928zpvl3"; depends=[lme4 MASS]; };
   MultiSV = derive2 { name="MultiSV"; version="0.0-67"; sha256="0924lvkx12aqjxxz8bwqdi4h9xc2acf8aynllx0m45ip5r4gh1g2"; depends=[nlme reshape]; };
   MultiSkew = derive2 { name="MultiSkew"; version="1.1.1"; sha256="1s0k3z1vgdz1cxad007p246ghwx282w06inhrjjscbwliz1vg5ib"; depends=[MaxSkew]; };
   MultiVarSel = derive2 { name="MultiVarSel"; version="1.0"; sha256="0r1l7h2rm7vlvnrsq0khjdd5cb236g9xq1fb1vr15038kf0lmkij"; depends=[ggplot2 glmnet Matrix]; };
   MultinomialCI = derive2 { name="MultinomialCI"; version="1.0"; sha256="0ryi14d102kvxawls04hcw50n79jkcn29ill77lkfvj6nlzj8i5q"; depends=[]; };
+  MultipleBubbles = derive2 { name="MultipleBubbles"; version="0.1.0"; sha256="1g6yqp53dbd96jcjgmif39zb3a7f9zil10dhqi3vz3qv6r2vsnkj"; depends=[foreach MASS]; };
+  MultiplierDEA = derive2 { name="MultiplierDEA"; version="0.1.17"; sha256="0s67w8ifd7g231aqq0qdia13kyb1cczhxrigsgrw48pqcfkv9208"; depends=[lpSolveAPI]; };
   MultisiteMediation = derive2 { name="MultisiteMediation"; version="0.0.1"; sha256="0x13q2kckw7c7bl35vdxyhhr7ij62wf0qbkxa40fi6aq2gjh89m6"; depends=[lme4 Matrix statmod]; };
   MultivariateRandomForest = derive2 { name="MultivariateRandomForest"; version="1.1.5"; sha256="0mww4x1hqraiyvmw2f9s6h180kplmj36hb7zfg7xlkmgdf4apk8d"; depends=[bootstrap Rcpp]; };
   MvBinary = derive2 { name="MvBinary"; version="1.1"; sha256="1lrrxvphxv4gmlazx67q4bck9373nqylqgkwcjzwb52291a3zyiv"; depends=[mgcv]; };
@@ -2152,7 +2194,7 @@ in with self; {
   Myrrixjars = derive2 { name="Myrrixjars"; version="1.0-2"; sha256="1hhfg83z5kl6l250z3lippx3qc68k1wj1qlfzd6m66rgmk699gyl"; depends=[rJava]; };
   NADA = derive2 { name="NADA"; version="1.6-1"; sha256="1jjlm6rljk4nv6b7l2w3xnj31j61wq30sp5pnna8wav6gyjqjfmb"; depends=[survival]; };
   NAEPprimer = derive2 { name="NAEPprimer"; version="1.0.1"; sha256="19p1livdnayfcl88f8r9x1vg30x522q8lgx66pfgwpkxjzvrqa2l"; depends=[]; };
-  NAM = derive2 { name="NAM"; version="1.5.4"; sha256="0hi677hn3jiplx58jnqnkbwrzj2ry6bq2yl9smf0flhsm1wcmpbp"; depends=[randomForest Rcpp]; };
+  NAM = derive2 { name="NAM"; version="1.5.5"; sha256="1g3jvqvzs0wmy1phz25irfb5xh4274cdwcjm5dxmqnjdh30d31n3"; depends=[randomForest Rcpp]; };
   NAPPA = derive2 { name="NAPPA"; version="2.0.1"; sha256="0nn4wgl8bs7sy7v56xfif7i9az6kdz9xw7m98z1gnvl2g7damvn3"; depends=[NanoStringNorm plyr]; };
   NB = derive2 { name="NB"; version="0.9"; sha256="1gh42z7lp6g09fsfmikxqzyvqp2874cx3a6vr96w43jfwmgi2diq"; depends=[]; };
   NB_MClust = derive2 { name="NB.MClust"; version="1.1.1"; sha256="0hzmrszxgx3pylf9pjjwk2ryjhwz7naxxkhcqpnfjv337vv5dg0i"; depends=[MASS]; };
@@ -2161,6 +2203,7 @@ in with self; {
   NCA = derive2 { name="NCA"; version="2.0"; sha256="08951mmmpziljclwzmbni1s5a62wr9s80iyfsr07gkdz4sx3cvqf"; depends=[gplots KernSmooth quantreg sfa]; };
   NCSampling = derive2 { name="NCSampling"; version="1.0"; sha256="0bv93xffnzvbip86b3pg7apxzh3410mxff77q119m0z7f6vm3fam"; depends=[lattice randomForest yaImpute]; };
   NCmisc = derive2 { name="NCmisc"; version="1.1.5"; sha256="1dq38ac97l8b6ys3yxqnndbrp8fa8zfw0lr4nq2421sn91769w22"; depends=[proftools]; };
+  NCutYX = derive2 { name="NCutYX"; version="0.1.0"; sha256="0r2ghnvrbya3p1d8rb5bsnz5v852vvc6rq65yafn2xzr7886wrg2"; depends=[fields glmnet MASS mvtnorm Rcpp RcppEigen]; };
   NEArender = derive2 { name="NEArender"; version="1.4"; sha256="1zdqil28j6jc6317dkpz5i1qj7b4i3lin4800n1kf14zg9nxjdyg"; depends=[MASS RColorBrewer ROCR]; };
   NEff = derive2 { name="NEff"; version="1.1"; sha256="16ys1fi28kbzg3am9vz1c5pc9x0ac47pl6za04h63lspk99yplzk"; depends=[bit msm]; };
   NEpiC = derive2 { name="NEpiC"; version="1.0.1"; sha256="11zf112xcsg3k93vks2fnsflw2v2d56a0bsjpd460d21k3gipfz8"; depends=[igraph PairedData]; };
@@ -2168,11 +2211,13 @@ in with self; {
   NHANES = derive2 { name="NHANES"; version="2.1.0"; sha256="0aphv3rakfcfrv2km1xyxpj1bxiazy6gwrvs7lyhxmq468fk4c9a"; depends=[]; };
   NHEMOtree = derive2 { name="NHEMOtree"; version="1.0"; sha256="0ycprj2rz2fy6a7ps0bsr27iphmbfxi9pbvl8rcr6p8yagfb84mb"; depends=[emoa partykit rpart sets]; };
   NHLData = derive2 { name="NHLData"; version="1.0.0"; sha256="0dfqalccbkmqrn3h1z6s78l818c8sqn7d6yc8mg872ygmszryci7"; depends=[]; };
-  NHMSAR = derive2 { name="NHMSAR"; version="1.6"; sha256="02g3yhd5xmrk15ydj110yd80aff2vxk852b4kbhnl3flnf3j2mzk"; depends=[caTools glasso lars ncvreg ucminf]; };
+  NHMSAR = derive2 { name="NHMSAR"; version="1.7"; sha256="14jc0zfl39yn7vkprcnv80mk1i4vp8w4wk7nz6f34cf473xbf49d"; depends=[caTools glasso lars ncvreg ucminf]; };
   NHPoisson = derive2 { name="NHPoisson"; version="3.1"; sha256="1gr682kxgw227yqw9w0iw9lrijsz5iszhnfk0mdhi6m1w9s28kcn"; depends=[car]; };
   NIPTeR = derive2 { name="NIPTeR"; version="1.0.2"; sha256="0ll6amqyw33a93xiccihidrnbaqlx1q7kqcd4wks7cvqawd8pgv1"; depends=[Rsamtools S4Vectors sets]; };
+  NIRStat = derive2 { name="NIRStat"; version="1.0"; sha256="1hi8201zslp1f7m3jci8q03y3f1zlcck2x3i793l7lsyl7qbzd1z"; depends=[ggplot2 gridExtra mgcv]; };
   NISTnls = derive2 { name="NISTnls"; version="0.9-13"; sha256="03a1c8a5dr5l5x4wbclnsh3vmx3dy7migfdzdx7d7p3s7hj3ibif"; depends=[]; };
   NISTunits = derive2 { name="NISTunits"; version="1.0.1"; sha256="0km9l3k9p35sb1qrhrz4ijjsdihvsp6j7cz5kh46lgf7nn6xdk7a"; depends=[]; };
+  NLMR = derive2 { name="NLMR"; version="0.2.1"; sha256="0vyha5sx0mz2kky8qwylamqc6k0gnmbkyanapy3dqav66l98ki8b"; depends=[checkmate dismo dplyr extrafont ggplot2 igraph magrittr purrr RandomFields raster rasterVis sp spatstat tibble tidyr viridis]; };
   NLP = derive2 { name="NLP"; version="0.1-11"; sha256="15v50gxzmpqx49wzkwxfpb5xjpg9y829a0ifys372kf1cfj521aq"; depends=[]; };
   NLPutils = derive2 { name="NLPutils"; version="0.0-4"; sha256="1dqbf8xmrzx81ybmp5qkd5a5rw3c19l2wxfnpddij4a1n074bwym"; depends=[NLP qdap SnowballC]; };
   NLRoot = derive2 { name="NLRoot"; version="1.0"; sha256="1x8mcdgqqrhyykr12bv4hl4wbh1zw2qgpnd2yrm68kb92iy95rh4"; depends=[]; };
@@ -2182,7 +2227,7 @@ in with self; {
   NMOF = derive2 { name="NMOF"; version="1.2-2"; sha256="03286pp57m7imbgw334r34yg7c5zbaw3d1qxr0sbhmc2jxvv1arm"; depends=[]; };
   NNLM = derive2 { name="NNLM"; version="0.4.1"; sha256="1wi2rbj56v49hsnhwdyyjwfk4hb84sagfq6mpjis4ccq65hxkvfv"; depends=[Rcpp RcppArmadillo RcppProgress]; };
   NNMIS = derive2 { name="NNMIS"; version="1.0.0"; sha256="02k766klw2fssiii5f4291qvs144ab9i5b6pmqvhyr87zdb87nf9"; depends=[survival]; };
-  NNS = derive2 { name="NNS"; version="0.3.8"; sha256="0xgycj4zyqfmhpx2jklj6xraq7bmkl87kh7jirwf440xyiqg2m8w"; depends=[data_table rgl stringr]; };
+  NNS = derive2 { name="NNS"; version="0.3.8.3"; sha256="0qyb8y54hxy5ac6m0mqyqbfjc4r3m4qvb83nw2vp4mb49fiinwxx"; depends=[data_table rgl stringr]; };
   NNTbiomarker = derive2 { name="NNTbiomarker"; version="0.29.11"; sha256="0sqlf7vzhpmq2g98c2qlrcqn3ba4ycfxbczgcjiqqhqsvgkpacc1"; depends=[magrittr mvbutils shiny stringr xtable]; };
   NORMA = derive2 { name="NORMA"; version="0.1"; sha256="193q6dwn8v7k8xq0amjpvb3v6mn7c6agqa487gvjj78dy1qz720a"; depends=[rootSolve]; };
   NORMT3 = derive2 { name="NORMT3"; version="1.0-3"; sha256="041s0qwmksy3c7j45n4hhqhq3rv2hncm2fi5srjpwf9fcj5wxypg"; depends=[]; };
@@ -2206,16 +2251,18 @@ in with self; {
   NScluster = derive2 { name="NScluster"; version="1.1.1"; sha256="1w63abh4q0wgv3x7inl2xyp9qgr9m223r2p7nfiqnxk9y259kh04"; depends=[]; };
   NUCOMBog = derive2 { name="NUCOMBog"; version="1.0.4.1"; sha256="1grz2yxrklqglw9027c8k01jnb42p453fcd38arw4wd85y5hbam4"; depends=[snowfall]; };
   NameNeedle = derive2 { name="NameNeedle"; version="1.2.4"; sha256="1f8hmabwafjmgx2z381a3m84zfrd0s9x51haa4c1phq41yfq2lm5"; depends=[]; };
-  NanoStringNorm = derive2 { name="NanoStringNorm"; version="1.2.0"; sha256="0rlfjzw7nhb6x6gwp29xxg956avm2idkk15793kfylkw8p7vc0di"; depends=[gdata vsn XML]; };
+  NanoStringNorm = derive2 { name="NanoStringNorm"; version="1.2.1"; sha256="05r1hvrxwi2mcq3pv6b699291qg120ijad96s5dah2f6cwx7gm7j"; depends=[gdata vsn XML]; };
+  NatureSounds = derive2 { name="NatureSounds"; version="1.0.0"; sha256="1gx0h0z3zc373l0mxcigc25s41l3yiylzsrir5k4rrr2bvzgf8ir"; depends=[]; };
   NbClust = derive2 { name="NbClust"; version="3.0"; sha256="1vwb48zy6ln1ddpqmfngii1i80n8qmqyxnzdp6gbaq96lakl3w3c"; depends=[]; };
   NeatMap = derive2 { name="NeatMap"; version="0.3.6.2"; sha256="186y06zrh87q6vixl2da2d6apvcj1zkk79c95k081zj5awmryr9b"; depends=[ggplot2 rgl]; };
   NegBinBetaBinreg = derive2 { name="NegBinBetaBinreg"; version="1.0"; sha256="0ryi9gdf4sis77c0qxm6r86mfkk1nq9djs297y64nr6ng3rv9p9d"; depends=[boot Matrix mvtnorm]; };
-  NestedCategBayesImpute = derive2 { name="NestedCategBayesImpute"; version="1.0.0"; sha256="1az32kqr5bl0mn9d69v21m80w4w3xm3pydwmr2awlfmdq674410i"; depends=[coda dplyr Rcpp]; };
+  NestedCategBayesImpute = derive2 { name="NestedCategBayesImpute"; version="1.1.0"; sha256="07gfp8k7v4krm4wsbynzs6zwprgg3g0c36jh8myqjxp2276ii8zn"; depends=[coda dplyr Rcpp]; };
   NestedCohort = derive2 { name="NestedCohort"; version="1.1-3"; sha256="10hsc6zik8sz2mp6ig3xr6z3bq0c6rlvqkn11pxny17a4n02wapp"; depends=[MASS survival]; };
   NetCluster = derive2 { name="NetCluster"; version="0.2"; sha256="0aby8kfniw07jap795cwk69z83p45q5rap73zp1qbmkm3qcb31g4"; depends=[sna]; };
   NetComp = derive2 { name="NetComp"; version="1.6"; sha256="11rxpdihn575diqfvc7yvxhlr2c19fig4v4a5c6jhqyfdsd60fsv"; depends=[gdata]; };
   NetData = derive2 { name="NetData"; version="0.3"; sha256="1jf05zwy0c6gmm7kvxlwvai61bz4wpsw7cl0h4i21ipzn1rqxmqj"; depends=[]; };
   NetIndices = derive2 { name="NetIndices"; version="1.4.4"; sha256="0ydivbri8l8zkxi18ghj9h66915scyhca8i9mcyq4b06mjfigss8"; depends=[MASS]; };
+  NetLogoR = derive2 { name="NetLogoR"; version="0.3.2"; sha256="1dqskma7iw178sy6gz0gr00zg84jgh95dv8w3hwz1wxsqpbpf1sb"; depends=[abind car CircStats data_table Hmisc matrixStats plyr quickPlot raster rgeos sp SpaDES_tools]; };
   NetOrigin = derive2 { name="NetOrigin"; version="1.0-2"; sha256="1ldlx4nmc5k756fmbm9vxn9rwzxmad84zpi6318pjr52izms6q2k"; depends=[colorspace Hmisc igraph]; };
   NetPreProc = derive2 { name="NetPreProc"; version="1.1"; sha256="0r51dqymf2nqm86py4zwdlf7qf120j0bg9r6a9c0gsyyijh4z40p"; depends=[graph]; };
   NetRep = derive2 { name="NetRep"; version="1.0.4"; sha256="1a58wxmjhd2jm5n6bl5l2706fbvfvjksfaal65fy04ssw14nziw8"; depends=[abind BH foreach RColorBrewer Rcpp RcppArmadillo ref RhpcBLASctl statmod]; };
@@ -2224,41 +2271,45 @@ in with self; {
   NetWeaver = derive2 { name="NetWeaver"; version="0.0.2"; sha256="0wsmz7db8q2fycz6rfbbfs67ccj857y9zs4d80k1gnqazgj5whkn"; depends=[]; };
   NetworkChange = derive2 { name="NetworkChange"; version="0.3"; sha256="1brpa6fhmrgafmk1iw19g0pppwxi0ld0nyhx9c0fgnkn9m82isjk"; depends=[abind ggplot2 ggvis LaplacesDemon MASS MCMCpack mvtnorm RColorBrewer Rmpfr]; };
   NetworkComparisonTest = derive2 { name="NetworkComparisonTest"; version="2.0.1"; sha256="09fqlnpdibf9jr5mw2pzmwi66f6cjz8rmm8jay0cv2bami7jhy2a"; depends=[IsingFit IsingSampler qgraph reshape2]; };
-  NetworkInference = derive2 { name="NetworkInference"; version="1.1.1"; sha256="053p7cpzmr2jwrgmdlwvipv5vfhvy52xw0xc51lnd4yiwmv4y5l0"; depends=[assertthat checkmate ggplot2 ggrepel Rcpp]; };
+  NetworkDistance = derive2 { name="NetworkDistance"; version="0.1.0"; sha256="0k11crn1wiisw4qrc2yidrhdvscx59skqy4ckxdiykpb1jh5a7s4"; depends=[doParallel foreach igraph Matrix network Rcpp RcppArmadillo Rdpack RSpectra]; };
+  NetworkInference = derive2 { name="NetworkInference"; version="1.1.2"; sha256="0lydfkpgsi842fbapnggpngarvqc8arhy4qn13x47myk1mmkkisj"; depends=[assertthat checkmate ggplot2 ggrepel Rcpp RcppProgress]; };
   NetworkRiskMeasures = derive2 { name="NetworkRiskMeasures"; version="0.1.2"; sha256="0c10nahybjd1n0yr78ynbsdnkfa0p7kz6dx3rbwxwsp3x4mrcd6y"; depends=[dplyr expm ggplot2 Matrix]; };
-  NetworkToolbox = derive2 { name="NetworkToolbox"; version="0.0.1.0"; sha256="01bha1kz1v4i2rv8kkmy57vsr0ni9764zzvf55sqnmnw2z405dic"; depends=[devtools Matrix psych qdap qgraph]; };
-  NeuralNetTools = derive2 { name="NeuralNetTools"; version="1.5.0"; sha256="04r0716vlv54cjybxspq61ahb12f2i8krhils5layr436k7slm07"; depends=[ggplot2 nnet reshape2 scales tidyr]; };
+  NetworkToolbox = derive2 { name="NetworkToolbox"; version="1.0.0"; sha256="1z0l8fdxvyxgajq0j6sx6mvr15sxd45kavy8ywk3hnlwcz1xy7m8"; depends=[corrplot devtools fdrtool graph hypergeo igraph MASS Matrix psych pwr qgraph R_matlab RBGL RColorBrewer]; };
+  NeuralNetTools = derive2 { name="NeuralNetTools"; version="1.5.1"; sha256="1dsjv0vm45skw74x1fz3gd7g6p52ayfwz85bh92j29mfxbnacbnn"; depends=[ggplot2 nnet reshape2 scales tidyr]; };
   Newdistns = derive2 { name="Newdistns"; version="2.1"; sha256="1b5njkzj8b0wrvvfv904di0933k9d320gadmfm5zl6pzdp34bh1i"; depends=[AdequacyModel]; };
   NightDay = derive2 { name="NightDay"; version="1.0.1"; sha256="0vkpr2jwhgghiiiaiglaj1b9pz25fcsl628c9nsp9zyl67982wz1"; depends=[maps]; };
   Nippon = derive2 { name="Nippon"; version="0.6.5"; sha256="187jzqsabg0vfvipbaig6nsdwclk5p3hgkvg0yid2ip8qc5qcmdw"; depends=[maptools sf sp stringr]; };
+  NipponMap = derive2 { name="NipponMap"; version="0.1"; sha256="09cvzw32f0kwlwvrv7r6cx2x2jkc2wv843aip8r3iziixmcy7vxq"; depends=[sf tibble]; };
   NlcOptim = derive2 { name="NlcOptim"; version="0.5"; sha256="0chrf9ac3x1a0b86lf6wjzdsjcv5n08rav88b7xf4c31lflf1rd1"; depends=[MASS quadprog]; };
   NlsyLinks = derive2 { name="NlsyLinks"; version="2.0.6"; sha256="1kdqifwjkkk4x1ixg3ca6lbqx79ab907nnzwxca5iw721mbk5njg"; depends=[lavaan]; };
   NoiseFiltersR = derive2 { name="NoiseFiltersR"; version="0.1.0"; sha256="0y90si8f5hsi273g10hw700r72la30hwqlwg59gaq76wqlkm8j0p"; depends=[caret e1071 kknn MASS nnet randomForest rJava rpart RWeka]; };
   NominalLogisticBiplot = derive2 { name="NominalLogisticBiplot"; version="0.2"; sha256="0m9442d9i78x57gdwyl3ckwp1m6j27cam774zkb358dw5nmwxbmz"; depends=[gmodels MASS mirt]; };
   NonCompart = derive2 { name="NonCompart"; version="0.3.3"; sha256="0f66p122rdibn8k79wjhvslgankhxk4dq9sfvq0gcabmi1skfqgq"; depends=[]; };
   NonpModelCheck = derive2 { name="NonpModelCheck"; version="3.0"; sha256="13qk2wbgpdf763q5xg29p2hxwqpml23pcgxrzmx12vnapnqfh71k"; depends=[dr]; };
+  Nonpareil = derive2 { name="Nonpareil"; version="3.3"; sha256="0bli88salj7mxmnh3b8wims1jlfzlq2lxd4kn2bp2vi58ij9v9pm"; depends=[]; };
   NormPsy = derive2 { name="NormPsy"; version="1.0.5"; sha256="0zhv6p9ffm2g02nr302j3qc6mrk5n4xxznircgbp4jx7hcj7cf1m"; depends=[lcmm]; };
   NormalGamma = derive2 { name="NormalGamma"; version="1.1"; sha256="0r3hhfscif0sx9v8f450yf119gpvf3ilpb8n3ziy4v4qf2jlcfnk"; depends=[histogram optimx]; };
   NormalLaplace = derive2 { name="NormalLaplace"; version="0.2-0"; sha256="11z568zhb7jw9ghp6wlyf26ijm25crc5pqhzw71qgvva42nsmmwn"; depends=[DistributionUtils GeneralizedHyperbolic]; };
   NormalizeMets = derive2 { name="NormalizeMets"; version="0.22"; sha256="1vhmdr3rbqxhp28zv7r8hzvmrrxq58rpj5n1az9pqmh6a9si678s"; depends=[AUC Biobase crmn DiffCorr e1071 GGally ggplot2 gplots htmlwidgets impute limma metabolomics MetNorm plotly RGtk2 statTarget]; };
   NostalgiR = derive2 { name="NostalgiR"; version="1.0.2"; sha256="0rpvwi815sdhaxqpji1y6g0vy8mkn5k6wci0a4jf54pkywwkwrwp"; depends=[txtplot]; };
   Nozzle_R1 = derive2 { name="Nozzle.R1"; version="1.1-1"; sha256="05sjip4sz12mwd3jcbvk342p83kdmrd4l2jrh17p18w4l7w4nn0z"; depends=[]; };
+  Numero = derive2 { name="Numero"; version="1.0.3"; sha256="1jj269b5cw7w4bgp6qvh0b3kpj32fjpsb2nbhyhjlkf7m03gnwwv"; depends=[Rcpp]; };
   OAIHarvester = derive2 { name="OAIHarvester"; version="0.3-0"; sha256="1c57jxb9n397wdkrirbfh70sxllrg9zsy0np698z7kcx83rz5lqr"; depends=[curl xml2]; };
   OBMbpkg = derive2 { name="OBMbpkg"; version="1.0.0"; sha256="01wch8wwij3fd0jambk0hpkhlnp4ryrq8qnnr2w1iad9zssjyii5"; depends=[]; };
   OBRE = derive2 { name="OBRE"; version="0.1-0"; sha256="1sxfb8mn0ky8x177l3v6wwcr96h5hfwd718h1akwrpir7acldchl"; depends=[pracma]; };
-  OBsMD = derive2 { name="OBsMD"; version="0.2-0.00"; sha256="16km0v6678lbgh9n2d9nvmpq6k7d2gicc68wnfy4kvn9vmpr79cz"; depends=[Rcpp]; };
+  OBsMD = derive2 { name="OBsMD"; version="2.1"; sha256="1w5d23m3nzswin803icw9vsafqcis2lkzr5bnhaa3bl5dq1xn5q5"; depends=[]; };
   OCA = derive2 { name="OCA"; version="0.1"; sha256="0kaf46gic8gp8f98y68kqvgm1baicwgvarfiwry1j0bd2rjad64d"; depends=[]; };
   ODB = derive2 { name="ODB"; version="1.1.1"; sha256="1hha4rkbc2zh3karkqa0vn4v0nmcd7sljcymy1nh28bx1gx2ffgs"; depends=[DBI RJDBC]; };
-  ODMconverter = derive2 { name="ODMconverter"; version="2.3"; sha256="07j9p2hfx3almd5n3j0clc1alj5wzrnzljd9w13bbd6nrvil1krm"; depends=[xlsx XML]; };
   OData = derive2 { name="OData"; version="0.6"; sha256="10r4kfhdabramjmkgc4fl0bljaiqbvc7rq4byas7q8cmji2czw6f"; depends=[RJSONIO XML]; };
   OECD = derive2 { name="OECD"; version="0.2.2"; sha256="07flhhca7734fffcqvxjl1hlhbbhn6lch868rlpps0r99jxy8m5q"; depends=[httr rsdmx xml2]; };
+  OGI = derive2 { name="OGI"; version="1.0.0"; sha256="0qw55jamkvdf3vfa5c0ygbymbs4d9q15dihiqz691hdfnyjvc2mk"; depends=[lpSolve]; };
   OHPL = derive2 { name="OHPL"; version="1.3"; sha256="0hm229nyv96s3sjljn5rwh89g1n6wsf24qm3ll5ccb0q2pcwnd7r"; depends=[glmnet mvtnorm pls]; };
   OIdata = derive2 { name="OIdata"; version="1.0"; sha256="078khxrszwnrww2h0ag153bf59fnyhirxy4m56ssgr2gmfahaymf"; depends=[maps RCurl]; };
   OIsurv = derive2 { name="OIsurv"; version="0.2"; sha256="148mpjj5navc1vrl72y87krn4lf3awnd32z3g4qqaia404w5w7p7"; depends=[KMsurv survival]; };
   OLScurve = derive2 { name="OLScurve"; version="0.2.0"; sha256="1zqapfwgwy9rxnbhmlgplkphw1bdia4cyi9q6iwcppw3rjw75f1n"; depends=[lattice]; };
   ONETr = derive2 { name="ONETr"; version="1.0.3"; sha256="14l56qcmyyk2ivcfkfv7j2k4i1mfrngpi9zcc88w6xfhz5qlb548"; depends=[plyr RCurl XML]; };
   OOBCurve = derive2 { name="OOBCurve"; version="0.2"; sha256="1dr2mp2wi2dir1h5w3rw17154byfy3gx02x2kz1r67l9dfgrr505"; depends=[mlr randomForest ranger]; };
-  OOR = derive2 { name="OOR"; version="0.1.1"; sha256="09c7c2inpnag3kckrg9lfzxd3giqkj9xm91ibjkgpfv68nf733qc"; depends=[]; };
+  OOR = derive2 { name="OOR"; version="0.1.2"; sha256="1zw7g0365znyn828qqsn83l2a837wwj9cx7dzcbns28vhqmsn6hm"; depends=[]; };
   OOmisc = derive2 { name="OOmisc"; version="1.2"; sha256="09vaxn5czsgn6wpr27lka40kzd76jzqgqxavf26ms3m9kkdf83g4"; depends=[]; };
   OPDOE = derive2 { name="OPDOE"; version="1.0-9"; sha256="0pf8rv5wydc8pl4x57g7bk2swjabaxdgijgsigjy5wihfcb48654"; depends=[crossdes gmp mvtnorm nlme orthopolynom polynom]; };
   OPI = derive2 { name="OPI"; version="2.7"; sha256="0mmk8alpwm4vmq2yr4qkri2zkh4lxfvrp70j0zljinxcynaraqzn"; depends=[]; };
@@ -2269,6 +2320,7 @@ in with self; {
   ORMDR = derive2 { name="ORMDR"; version="1.3-2"; sha256="0y7b2aja3zvsd6lm7jal9pabcfxv16r2wh0kyzjkdfanvvgk3wmm"; depends=[]; };
   OSCV = derive2 { name="OSCV"; version="1.0"; sha256="17wrfak6b6m2l3iqbhdwcfh0rlqb14rkvrbari7v46gya9v7hq20"; depends=[mc2d]; };
   OSMscale = derive2 { name="OSMscale"; version="0.5.1"; sha256="0rjhyhh1iafgd9h1pbd2clyg2sh0gg7y1aqmiislqyn6h6jrvgqn"; depends=[berryFunctions OpenStreetMap sp]; };
+  OSTSC = derive2 { name="OSTSC"; version="0.0.1"; sha256="0p92w25xvajsn44rd5hg1m7l9l4m0rpmw175nnqr438432hqh7cc"; depends=[doParallel doSNOW fields foreach MASS]; };
   OTE = derive2 { name="OTE"; version="1.0"; sha256="18w483syhs523yfib9sibzmj16bypqxk4sc4771kfr1958h3igai"; depends=[randomForest]; };
   OTRselect = derive2 { name="OTRselect"; version="1.0"; sha256="1bh14228yz552ngywjf1qyh1isqj4cgiy7n7d4zg8dpqwxr04ykp"; depends=[lars survival]; };
   OTUtable = derive2 { name="OTUtable"; version="1.1.1"; sha256="0mjjfndc67gzkqskcq4sxpr8fwx3lm3wjgapgg64rbj5x4i1w4rp"; depends=[]; };
@@ -2281,17 +2333,18 @@ in with self; {
   OjaNP = derive2 { name="OjaNP"; version="0.9-9"; sha256="12a7zfrk3rdvfby5qa511w3nk5jpnsd5gg2z46b5s97rxb3qq7za"; depends=[ICS ICSNP Rcpp]; };
   OligoSpecificitySystem = derive2 { name="OligoSpecificitySystem"; version="1.3"; sha256="17mspf1ph2ybv046zckykfdcbrsiz40hrs6ib5mpwkfnrvsp1w7l"; depends=[tkrplot]; };
   OmicKriging = derive2 { name="OmicKriging"; version="1.4.0"; sha256="08frr38yf5d0l3zwkbq9465xrbyzsn8sx9icqc3yvfnxrkhrpzig"; depends=[doParallel foreach irlba ROCR]; };
-  OmicsPLS = derive2 { name="OmicsPLS"; version="1.0.3"; sha256="0i8vc4lg642pgy934hv1nln91g5s15la0328bbs530fx6c2132dz"; depends=[ggplot2]; };
+  OmicsPLS = derive2 { name="OmicsPLS"; version="1.1.0"; sha256="16q226y8wshjdry538w6zk116rip97hr5bfjyz8g960gy40pjn6j"; depends=[ggplot2]; };
   OnAge = derive2 { name="OnAge"; version="1.0.1"; sha256="1zby5sf92c185b5m19jv4ndgbv6mz107nc47zn1d6bijrypzpc20"; depends=[]; };
   Oncotree = derive2 { name="Oncotree"; version="0.3.3"; sha256="147rc9ci66lxbb91ys2ig40sgmldi15p604yysrd4ccbxpbk2zwf"; depends=[boot]; };
   OneArmPhaseTwoStudy = derive2 { name="OneArmPhaseTwoStudy"; version="1.0.3"; sha256="0q8g33s1jq0ipvwq83xhrly8idsh68licgyivxc628zbm1id5p38"; depends=[Rcpp]; };
   OneR = derive2 { name="OneR"; version="2.2"; sha256="1k7rzhcwq5b2yi4zfsc1r0yb6w65gxj9835d2a1dclallja3zav2"; depends=[]; };
   OneTwoSamples = derive2 { name="OneTwoSamples"; version="1.0-3"; sha256="0019rc2f4jmbm6sinkvalvjqwi822x78aiin88kg8qbbb5ml8l89"; depends=[]; };
+  OpVaR = derive2 { name="OpVaR"; version="1.0"; sha256="03bl7z78zgjmpc0mpmcq98zfscj3jja1fiwzx58rw5yk0dhqrhm8"; depends=[actuar evmix goftest MASS ReIns tea truncnorm vcd VineCopula]; };
   OpasnetUtils = derive2 { name="OpasnetUtils"; version="1.3"; sha256="0mmn4dpk1wl8slg55xzhpk7jdwhkrka53rwmrsr73sikkh3mcyfn"; depends=[digest ggplot2 httpRequest igraph plyr RCurl reshape2 rgdal rjson sp triangle xtable]; };
   OpenCL = derive2 { name="OpenCL"; version="0.1-3"; sha256="0f7vis0jcp0nh808xbzc73vj7kdcjb0qqzzsh3gvgamzbjfslch8"; depends=[]; };
-  OpenImageR = derive2 { name="OpenImageR"; version="1.0.7"; sha256="1fj5jss2i1qvphy7zd8vny5ifnn7jpi603zzbyw50m2pf10z3pd8"; depends=[jpeg png Rcpp RcppArmadillo shiny tiff]; };
+  OpenImageR = derive2 { name="OpenImageR"; version="1.0.8"; sha256="1j7p1wrzznrisbzw8j1qsxyyv3zr5hk6q9yxw97y6lrfh3c26ig1"; depends=[jpeg png Rcpp RcppArmadillo shiny tiff]; };
   OpenML = derive2 { name="OpenML"; version="1.7"; sha256="052pm43pnjil3v8wx429bz13xc90hyqx2hz33zrq0sjdsx9zpi6k"; depends=[backports BBmisc checkmate curl data_table digest httr jsonlite memoise mlr ParamHelpers stringi XML]; };
-  OpenMPController = derive2 { name="OpenMPController"; version="0.2-4"; sha256="1m2jkkh30836zs1445yfy30r3gp1qay0zqj02px3ijgzpzb928i5"; depends=[]; };
+  OpenMPController = derive2 { name="OpenMPController"; version="0.2-5"; sha256="00hs8v47pr2d726z8izkfrgmayw147hdm16rr9rw1zs3ad216zjj"; depends=[]; };
   OpenMx = derive2 { name="OpenMx"; version="2.8.3"; sha256="0kz1x3x43jf326x7l8lb7rlnng4r5cp11vrs1pnnxkmbhqzbbwy8"; depends=[BH digest MASS Matrix Rcpp RcppEigen rpf StanHeaders]; };
   OpenRepGrid = derive2 { name="OpenRepGrid"; version="0.1.10"; sha256="0ikw8l9hffcaa094y6pnvyc3ly5jb02djaakz668ba15a0yw0wmb"; depends=[abind colorspace GPArotation plyr psych pvclust rgl stringr XML]; };
   OpenStreetMap = derive2 { name="OpenStreetMap"; version="0.3.3"; sha256="099vdyq0vw9xl5v7zggdb8yd4zl7x8imvvbj5j2f5hrspgg131pz"; depends=[ggplot2 raster rgdal rJava sp]; };
@@ -2299,6 +2352,7 @@ in with self; {
   OptGS = derive2 { name="OptGS"; version="1.1.1"; sha256="1acwwjng5ri5vganv7b5pagp7524ifr0q8h1pbfb5g6z3x6w08kh"; depends=[]; };
   OptHedging = derive2 { name="OptHedging"; version="1.0"; sha256="0g7qaf5abvbcqv2h1dciwn3gwpz084ryqjjk0yabdm4ym0y38ddm"; depends=[]; };
   OptInterim = derive2 { name="OptInterim"; version="3.0.1"; sha256="1ks24yv5jjhlvscwjppad27iass59da1mls99hlif0li9mvkbvyk"; depends=[clinfun mvtnorm]; };
+  OptSig = derive2 { name="OptSig"; version="1.0"; sha256="1jmnxwci4rzlwgnq4zxhkii9j7ch1bymx44hk3qv7ws24k7g87nn"; depends=[pwr]; };
   OptimaRegion = derive2 { name="OptimaRegion"; version="0.2"; sha256="0xhl7jp2429007jzx305ggfwyx0vh2vxw7l2a7f3c0prklhyqpqc"; depends=[boot DepthProc fields nloptr rsm spam]; };
   OptimalCutpoints = derive2 { name="OptimalCutpoints"; version="1.1-3"; sha256="1vrbx62080r9sgk9ipjvdrqvikp4gwidp5gi5j92hspk7cp10amg"; depends=[]; };
   OptimalDesign = derive2 { name="OptimalDesign"; version="0.2"; sha256="1gpcasdbcgqqr1l6f63q4jqva28rpz0cbgs1f4l3bizldd9kf4kh"; depends=[]; };
@@ -2307,7 +2361,7 @@ in with self; {
   OrdFacReg = derive2 { name="OrdFacReg"; version="1.0.6"; sha256="16mavsmp6d8rfmimmp5ynwyzir0gycpg8rhd8cwanlrndyclqlpv"; depends=[eha MASS survival]; };
   OrdLogReg = derive2 { name="OrdLogReg"; version="1.1"; sha256="18s75pmz1g3yac2rfl41kj8sfflq298qkijnvqlybgxpq98ickxx"; depends=[LogicReg]; };
   OrdMonReg = derive2 { name="OrdMonReg"; version="1.0.3"; sha256="1xca8pvvq79j484l2rmn4nva8ncx8z51g5diljikck231y8qjqaz"; depends=[]; };
-  OrdNor = derive2 { name="OrdNor"; version="2.0"; sha256="1zr8zzigrbf6r0zz4f0za6my6d67wxqzvmabl36pjxc3sq7jh83j"; depends=[corpcor GenOrd Matrix mvtnorm]; };
+  OrdNor = derive2 { name="OrdNor"; version="2.1"; sha256="1s3lhkscr4w36qjq02qlb3pw37naq0k99khr9648qzshhzsfxibl"; depends=[corpcor GenOrd Matrix mvtnorm]; };
   OrdinalLogisticBiplot = derive2 { name="OrdinalLogisticBiplot"; version="0.4"; sha256="1axn03yrw30r2j9ss5ig9sq857y37vhrr4a7px68jc2az8mng41j"; depends=[MASS mirt NominalLogisticBiplot]; };
   OrgMassSpecR = derive2 { name="OrgMassSpecR"; version="0.5-3"; sha256="1dx9d8rb1dfqyhyc26zhfnxiv3rz2ikvs2mwqnsrq3lsjs9dvyc8"; depends=[]; };
   OriGen = derive2 { name="OriGen"; version="1.4.3"; sha256="0a7mql87dqxrfx7phgy32hbanfwnjx8x52mj83xf2mgmqhrcikr6"; depends=[ggplot2 maps]; };
@@ -2315,13 +2369,13 @@ in with self; {
   OutbreakTools = derive2 { name="OutbreakTools"; version="0.1-16"; sha256="1ffqfr1pwlf53ahbh01ygv3d2d8fl47k9kk61l2h0g4h601swadi"; depends=[ape ggmap ggplot2 knitr network networkDynamic plyr RColorBrewer RCurl reshape2 rjson scales sna]; };
   OutlierDC = derive2 { name="OutlierDC"; version="0.3-0"; sha256="1vm3zx4qmj9l0ddfqbksm1qyqzzqrxf93gh4kj52h68zlsfxwv41"; depends=[Formula quantreg survival]; };
   OutlierDM = derive2 { name="OutlierDM"; version="1.1.1"; sha256="0n8iq464ryc3v4wms7cdka39870w5pg29z9v8gmdsp4d9cfsx9v4"; depends=[MatrixModels outliers pcaPP quantreg]; };
-  OutliersO3 = derive2 { name="OutliersO3"; version="0.2.1"; sha256="09kq3jhsqxwqsnn8av12jd0qxw0ai1h0f46mib1z0bwwbxg6bf9h"; depends=[cellWise dplyr FastPCS forcats GGally ggplot2 HDoutliers rlist robustbase robustX tidyr]; };
+  OutliersO3 = derive2 { name="OutliersO3"; version="0.5.4"; sha256="0mbhbgq9qh74gb8x1hapx4pjik3p7jrls3bg7rg1zzddakxibis2"; depends=[cellWise dplyr FastPCS forcats GGally ggplot2 HDoutliers memisc rlist robustbase robustX tidyr]; };
   OutrankingTools = derive2 { name="OutrankingTools"; version="1.0"; sha256="0z7pslkkinn7flc4xwjg0bsfswf8ad4jv9rmglaj3fmjcx9b6wgj"; depends=[igraph]; };
   OxyBS = derive2 { name="OxyBS"; version="1.5"; sha256="11l3gm0jvw993jb13f6kpv77m6z0d1jswscma2v28qzkw053r3dc"; depends=[]; };
   P2C2M = derive2 { name="P2C2M"; version="0.7.6"; sha256="07ycl22v03b2xdaw4v0l6layqhab431ma38qywzm96hkl3ywvl49"; depends=[ape ggplot2 rPython stringr]; };
   PAC = derive2 { name="PAC"; version="1.0.9"; sha256="1757wpy92hhk1gpzm719kkhh31qkn0a2cbagyn3pnx5vklywfzz1"; depends=[dplyr ggplot2 ggrepel igraph infotheo parmigene Rcpp Rtsne]; };
   PACBO = derive2 { name="PACBO"; version="0.1.0"; sha256="1v3j5bgvf0wh8s4d2yyz0fkc3acdwjlicwnbh1r241b1742x79cb"; depends=[mnormt]; };
-  PAFit = derive2 { name="PAFit"; version="1.0.0.1"; sha256="12cq692wfvakyhxqjjzcvrwy7yclki7pqn6k507hd44ka3lva3nl"; depends=[igraph magicaxis MASS network networkDynamic plyr RColorBrewer Rcpp VGAM]; };
+  PAFit = derive2 { name="PAFit"; version="1.0.0.3"; sha256="0s9zxr9368cf6skskqb2q67jkynzm4s3qp07i0m1zrmn9142hw9z"; depends=[igraph magicaxis mapproj MASS network networkDynamic plyr RColorBrewer Rcpp VGAM]; };
   PAGI = derive2 { name="PAGI"; version="1.0"; sha256="01j1dz5ihqslpwp9yidmhw86l112l7rfkswmf03vss872mpvyp3f"; depends=[igraph]; };
   PAGWAS = derive2 { name="PAGWAS"; version="2.0"; sha256="0bz47ivd32kx1amgqllqbxyyvj773q7wasgk924hmibabiixa8nx"; depends=[foreach lars mnormt]; };
   PANDA = derive2 { name="PANDA"; version="0.9.9"; sha256="1sf3c49v4mb3mz2imqlqdbh1iab7bc2pxpi8bmgj2jld133555ip"; depends=[cluster GO_db]; };
@@ -2334,24 +2388,26 @@ in with self; {
   PATHChange = derive2 { name="PATHChange"; version="1.0"; sha256="1pmxhaych01cywx9bb5z0p5lbxcma7x6nlprivpx3gnpg7m9srpg"; depends=[rlist stringr VennDiagram]; };
   PAWL = derive2 { name="PAWL"; version="0.5"; sha256="1sx4g4qycba2j1fm0bvhz3hk6ghhdc37rz5zi1njqxrpmbnkqg04"; depends=[foreach ggplot2 mvtnorm reshape]; };
   PAactivPAL = derive2 { name="PAactivPAL"; version="2.0"; sha256="1mjfxq0a9fql8bg5c6l5w1knjqq29cb4l10ppxnym9gnsjrk0kw1"; depends=[]; };
+  PAmeasures = derive2 { name="PAmeasures"; version="0.1.0"; sha256="0c2pkms06lijly9clxp6zkasqy4zjicdwnvbqwvhp45yavwmkkkj"; depends=[survival]; };
   PBD = derive2 { name="PBD"; version="1.4"; sha256="1n8gq8ms6gszr469hblipbgalc5m7gfiknpsbqywxml62sr4wbsb"; depends=[ade4 ape DDD deSolve phytools]; };
-  PBIBD = derive2 { name="PBIBD"; version="1.2"; sha256="1dbrd6qwczwk41zmh9ck9cgzqpry9kycygyk0ls8kc92p45cz3dh"; depends=[]; };
+  PBIBD = derive2 { name="PBIBD"; version="1.3"; sha256="0zh73bsiwmsqw1vhs2dazndsf0894kfv3vfv88wr4fnh7njysz6r"; depends=[]; };
   PBImisc = derive2 { name="PBImisc"; version="1.0"; sha256="18gjp66q6l0w6vsgm6d5sjgpa906z1gyyp6yf58lq5vyg1bnfmcl"; depends=[lme4 Matrix]; };
-  PBNPA = derive2 { name="PBNPA"; version="0.0.1"; sha256="1a43kk7di5bqifa68lhrxx3p9vvfn0rr5nifx60c2y7j7cp63fk8"; depends=[metaRNASeq]; };
+  PBNPA = derive2 { name="PBNPA"; version="0.0.2"; sha256="1qyjksm2z1p279aimb3zaaaj4328m5p0cbkqm3qzl87yp5g45vyq"; depends=[metaRNASeq]; };
   PBSadmb = derive2 { name="PBSadmb"; version="0.68.104"; sha256="01akimdsp0bkvz3a5d75yyy3ph0mff85n8qsnr59fla5b5cm4qlj"; depends=[PBSmodelling]; };
   PBSddesolve = derive2 { name="PBSddesolve"; version="1.12.2"; sha256="12pl95mcak88524s8zvk9dzib2g40fwaz6iz7igx9wg6vib9d1sj"; depends=[]; };
   PBSmapping = derive2 { name="PBSmapping"; version="2.70.4"; sha256="09kzydgghgmhnna24gpq1hjgw7w9i1lm6nwkj358jsik6fjph73r"; depends=[]; };
-  PBSmodelling = derive2 { name="PBSmodelling"; version="2.67.266"; sha256="0ych9k20x0m71gkdrpwv5jnx6pfsk45wwsaaamy32cmnhd3y14sq"; depends=[XML]; };
+  PBSmodelling = derive2 { name="PBSmodelling"; version="2.68.6"; sha256="1d5shqvzfyi0fy03wcib2db497nsdw211ahfcvl1kaady1immz2w"; depends=[XML]; };
   PCA4TS = derive2 { name="PCA4TS"; version="0.1"; sha256="1qi9nlaf5181afrdvddh10a9vxyhry102n3dhai86im8yz4if9y6"; depends=[tseries]; };
   PCA4you = derive2 { name="PCA4you"; version="1.2.4"; sha256="117wb0h4jqjymm1p90m6vgj713iavrmj035c2gz5nynligvfnm83"; depends=[mixOmics]; };
   PCADSC = derive2 { name="PCADSC"; version="0.8.0"; sha256="0pwkmmnsw3c6ch2k5wdc8ig71994pdp79v3a5aa9n9aq55a8c2ir"; depends=[ggplot2 Matrix pander reshape2]; };
   PCAmixdata = derive2 { name="PCAmixdata"; version="3.1"; sha256="0flrsnbchwk06dmkg3vqykp9n4pqs265szn1r10navp8ki3rrmvh"; depends=[]; };
   PCDSpline = derive2 { name="PCDSpline"; version="1.0"; sha256="15kmvcwvwlsr1107n7mfajvf9b1kcslnhsdx0drjjhsvq193qrqa"; depends=[matrixcalc nleqslv]; };
+  PCDimension = derive2 { name="PCDimension"; version="1.1.8"; sha256="1359cmswynv9xqbfb60kh32ifm9wgm20iplkdfzf5v2c4vxd0rmf"; depends=[changepoint ClassDiscovery cpm kernlab oompaBase]; };
   PCFAM = derive2 { name="PCFAM"; version="1.0"; sha256="196jzv0f6j60zkyagm9n98339ipn8mrhmhl3q4g053z8f6mm9zmv"; depends=[]; };
   PCGSE = derive2 { name="PCGSE"; version="0.4"; sha256="0ky1nzhz6v9n34kas9nw2scc6ip7av19g09zcsxaa9436nhip4f6"; depends=[MASS RMTstat safe]; };
   PCICt = derive2 { name="PCICt"; version="0.5-4"; sha256="1g17hxs00dlnb6p0av6l7j99qy00555f80nk1i1i1x87fszp3axa"; depends=[]; };
   PCIT = derive2 { name="PCIT"; version="1.5-3"; sha256="0gi28i2qd09pkaja4w7abcl7sz43jnk98897vc2905fnk9nks65j"; depends=[]; };
-  PCMRS = derive2 { name="PCMRS"; version="0.0-2"; sha256="0xybfqjla1wdlrfskjwff0brl2hp5d2fs646k3gzjm0lzbi5z9mq"; depends=[cubature ltm mvtnorm Rcpp RcppArmadillo statmod]; };
+  PCMRS = derive2 { name="PCMRS"; version="0.1-1"; sha256="10n4am4qm23aaghf8awv2llcq7392s62yr6mf5h8nf18hfz29wrn"; depends=[cubature ltm mvtnorm Rcpp RcppArmadillo statmod]; };
   PCPS = derive2 { name="PCPS"; version="1.0.3"; sha256="1ys3xp1nripy5zkq25byak9k6yf5rdbfnww8j13yc469428ip8q0"; depends=[ape phylobase picante SYNCSA vegan]; };
   PCRedux = derive2 { name="PCRedux"; version="0.2.5-1"; sha256="1p5qmz09ajbm1iypyz5rn9bwzbbx57gc6a0xzrm900dw2r2cf7ph"; depends=[bcp changepoint chipPCR ecp fda_usc FFTrees magrittr MBmca pbapply plotly pracma qpcR robustbase testthat visdat zoo]; };
   PCS = derive2 { name="PCS"; version="1.2"; sha256="0488h6s1yz6fwiqf88z2vgckn6i0kwls8cazmpw3wspnaqvl2n4s"; depends=[multtest statmod]; };
@@ -2362,13 +2418,12 @@ in with self; {
   PDQutils = derive2 { name="PDQutils"; version="0.1.6"; sha256="0mmfi0ifwbkjm0274sddpwkj27cvdkwngnka8vdmfm4b2nn7vgsp"; depends=[moments orthopolynom]; };
   PDSCE = derive2 { name="PDSCE"; version="1.2"; sha256="17lc6d8ly6jbvjijpzg45dvqrzrh5s1sp415nycazgpbg9ypwr2h"; depends=[]; };
   PEGroupTesting = derive2 { name="PEGroupTesting"; version="1.0"; sha256="1z863ard0cc2g8ibxnmxhiqhvs53r6b8gpnavnfchm9432ifcbwi"; depends=[]; };
-  PEIP = derive2 { name="PEIP"; version="2.0-1"; sha256="0zfvp3ngc4320sh6r6y746zxigr2wqgaqasnlkv3hxhzpzxq08lj"; depends=[bvls Matrix pracma RSEIS]; };
+  PEIP = derive2 { name="PEIP"; version="2.2-1"; sha256="0bzynmd7azs33994dlsabxp29lncs1v2njp6iy5l62rwrnxj9y0a"; depends=[bvls fields geigen Matrix pracma RSEIS]; };
   PEMM = derive2 { name="PEMM"; version="1.0"; sha256="18dd9hsbdrnhrrff7gpdqrw2jv44j8lg0v3lkcdpbd4pppcaq84h"; depends=[]; };
-  PET = derive2 { name="PET"; version="0.4.9"; sha256="1ijg6mfh3xrc1gjh6a4nq64psk9yh16yc8nfp7c9837xbjigqq7f"; depends=[adimpro]; };
+  PET = derive2 { name="PET"; version="0.5.0"; sha256="0k26lfkb58sdqy5b5kd7dkd7nzhxqh1b8pxyx2bdl0lx50sn94jc"; depends=[adimpro]; };
   PGEE = derive2 { name="PGEE"; version="1.5"; sha256="1qcxbqnbpplnfjy83nm9fj9y4abzgbxnsggzx7ix3vb9qs18cdwh"; depends=[MASS mvtnorm]; };
-  PGICA = derive2 { name="PGICA"; version="1.0"; sha256="0qxa5hw2s3mndjvk8lb82pcbyj1kbdclx4j4xa8jq0lcj180abi9"; depends=[fastICA]; };
   PGM2 = derive2 { name="PGM2"; version="1.0-1"; sha256="03282pcq7gw47awc2mxjsbz6w3zpqjhqd7fzg8la4p00cd0vvmr4"; depends=[]; };
-  PGRdup = derive2 { name="PGRdup"; version="0.2.3.2"; sha256="1m6511bgml76gb3pc8dgq3i30sci1hnayhmxq62farzdcd4wxnfs"; depends=[data_table ggplot2 gridExtra igraph stringdist stringi]; };
+  PGRdup = derive2 { name="PGRdup"; version="0.2.3.3"; sha256="1s0v44922zpxl3w9kzn9xzvs5jldg35gjrnlf89f89i3rs59gg98"; depends=[data_table ggplot2 gridExtra igraph stringdist stringi]; };
   PHENIX = derive2 { name="PHENIX"; version="1.3.1"; sha256="1gd9ycrwawi81al4f5v559km1112giwqnwvvk8ynj4kdb5bqpyq4"; depends=[ppcor SuppDists]; };
   PHYLOGR = derive2 { name="PHYLOGR"; version="1.0.8"; sha256="17lmjfbwf8j68zzzhdvppyjacdsmy4zmcfj0pcjsw5j6m361hvh6"; depends=[]; };
   PHeval = derive2 { name="PHeval"; version="0.5.3"; sha256="1zq4ks6w5vrhy1f170fv16zgrgi1lfxmkpfkg75sjin7asw4i7a9"; depends=[survival]; };
@@ -2377,29 +2432,31 @@ in with self; {
   PIPS = derive2 { name="PIPS"; version="1.0.1"; sha256="1c5v3s6xys9p1q32k6mpsffhi9gwsq951rh12hs76dmak862yspc"; depends=[]; };
   PK = derive2 { name="PK"; version="1.3-3"; sha256="07qxyszj0f7qwrg5ixvciy33mjsfxxi9rk32a1fz46z8wiwfil9i"; depends=[]; };
   PKI = derive2 { name="PKI"; version="0.1-5.1"; sha256="1xs3jxbczhkxnp7cyw2yh1jcwha92y9pdsbka1ligbla70bnvxyj"; depends=[base64enc]; };
-  PKNCA = derive2 { name="PKNCA"; version="0.8.1"; sha256="1by2yp1ngqv06w7dfl7lbb80gnmpid4xg1yhk4zvx8bwss0ggzph"; depends=[digest dplyr lattice nlme plyr tidyr]; };
-  PKPDmisc = derive2 { name="PKPDmisc"; version="2.0.0"; sha256="0rn5m5wak6lis5wck2ws934bzy8w65wj1d0l3rz8svfd8agf2ys8"; depends=[BH data_table dplyr ggplot2 lazyeval magrittr purrr Rcpp readr rlang stringr tibble]; };
+  PKNCA = derive2 { name="PKNCA"; version="0.8.4"; sha256="013b4d74virwjpxq20m566ya85q31aq6bdgk5fpjrwh5ja6805ka"; depends=[digest dplyr lattice nlme plyr rlang tidyr]; };
+  PKPDmisc = derive2 { name="PKPDmisc"; version="2.1.1"; sha256="1p47zdhilprzcwarfmisq7g7znr73wgxns43mn3d7w5sv671mygv"; depends=[BH data_table dplyr ggplot2 lazyeval magrittr purrr Rcpp readr rlang stringr tibble]; };
   PKPDmodels = derive2 { name="PKPDmodels"; version="0.3.2"; sha256="1h893civ77ahbgjnc6kq3l7rszmqmx9dlxwavldigpq3r79vd86k"; depends=[]; };
   PKgraph = derive2 { name="PKgraph"; version="1.7"; sha256="0g36cdv5cblqx69j48irxjc5nlw2cl3p714mlsblnd3362z1brwn"; depends=[cairoDevice ggplot2 gWidgetsRGtk2 lattice proto rggobi RGtk2]; };
   PKreport = derive2 { name="PKreport"; version="1.5"; sha256="16hss9migbxpnw5f9gcw1nlvb81iyji00ylx5wd6kdwhz0ids9wj"; depends=[ggplot2 lattice]; };
   PLIS = derive2 { name="PLIS"; version="1.1"; sha256="0b81s7677wglqvv1b5lx8k2iaks09kz0wrl07245a7j2pk9nxv7p"; depends=[]; };
-  PLMIX = derive2 { name="PLMIX"; version="1.0"; sha256="1z59z7ynlfh7cskanj7drvry0fpzl5mq52as8adi2zxp2q8q032p"; depends=[abind combinat foreach FSA rcdd Rcpp]; };
+  PLMIX = derive2 { name="PLMIX"; version="2.0"; sha256="1dvlzv3hajdj3cc83kkna7igzppy88dwppap12zaxnh2afwpvv7k"; depends=[abind foreach gtools label_switching MCMCpack rcdd Rcpp]; };
   PLRModels = derive2 { name="PLRModels"; version="1.1"; sha256="0dwnzfw7a1cxz9s00kxf19jmjsc8cy6cc9q2mjqf8z7690wrg7hb"; depends=[]; };
   PLSbiplot1 = derive2 { name="PLSbiplot1"; version="0.1"; sha256="1l8d1k913ic0qwxvrrd447p5ni3mzc6v9lv45b7vqrpzkxdci6gy"; depends=[]; };
   PLmixed = derive2 { name="PLmixed"; version="0.1.2"; sha256="1pi4ivw090lbg983d8wymhk0i97jrzi1nrkrrz3llnafadysh4rh"; depends=[lme4 Matrix numDeriv]; };
   PLordprob = derive2 { name="PLordprob"; version="1.0"; sha256="156lvz6vfm68hm32l5nlhq15hfacdla627d6lf8l4g34lwzdh8k8"; depends=[mnormt]; };
   PMA = derive2 { name="PMA"; version="1.0.9"; sha256="11qwgw4sgzl3xhrm468bsza83h3mfn89157nfwnrassl7qr42xkq"; depends=[impute plyr]; };
-  PMCMR = derive2 { name="PMCMR"; version="4.1"; sha256="0mfms8wvdwcakkgsnrb2wawp07hvlr7s6cvl54kxv7f5fqllw5kc"; depends=[]; };
+  PMCMR = derive2 { name="PMCMR"; version="4.2"; sha256="1dqfn68034xkik4xfl8mlqsh7x427f7cwna5axj8gvjcj9l48x8c"; depends=[]; };
+  PMCMRplus = derive2 { name="PMCMRplus"; version="1.0.0"; sha256="11sliznixsrrlr0y365hxpg64jfva8l1ilrnkdd32ddy8713sin7"; depends=[BWStest gmp kSamples MASS multcompView mvtnorm Rmpfr SuppDists]; };
   PNADcIBGE = derive2 { name="PNADcIBGE"; version="0.4.0"; sha256="1lr7ycsjp9dimkbxfapl1qpvlvl0771rdipaf26sgi7iabqpz5b4"; depends=[dplyr magrittr RCurl readr readxl survey timeDate]; };
   POET = derive2 { name="POET"; version="2.0"; sha256="0w3jhj45sxisyrpcsazbrbcsz7rmraw71jjm0zixbcgc4klb98ar"; depends=[]; };
   POMaSPU = derive2 { name="POMaSPU"; version="1.0.0"; sha256="0jz3jgzdykv0xvfw3ix0hbs32as6dp7p5v8bj5nddknx10d0siya"; depends=[MASS matrixStats Rcpp RcppArmadillo]; };
+  POPdemog = derive2 { name="POPdemog"; version="1.0.3"; sha256="0j83c853ligmw8ag4pb0vj46sfn2w2ynh4wvgkabzs688hxxni8r"; depends=[]; };
   POT = derive2 { name="POT"; version="1.1-6"; sha256="08av53rnishk3mhwrb6ydbgc3n9nwi87jlx5vmag3vpiidhn1laj"; depends=[]; };
-  POUMM = derive2 { name="POUMM"; version="1.3.2"; sha256="0v7wgswgqikqlhz087qg75026saqd88ml1mxp375m5nab412ng3d"; depends=[adaptMCMC ape coda data_table foreach GGally ggplot2 gsl Rcpp RcppArmadillo]; };
   PP = derive2 { name="PP"; version="0.6.1"; sha256="10innn1nhc4zqimd0gww7k3k30jkfkkj89zkddcjqa2sqq5gs3xr"; depends=[Rcpp]; };
-  PPCI = derive2 { name="PPCI"; version="0.1.0"; sha256="1s88m49vfla2kfpnb45ra5sfb02969ybpbi8nn24vf6ama7lg9jc"; depends=[rARPACK]; };
+  PPCI = derive2 { name="PPCI"; version="0.1.1"; sha256="1f3jmrkszjq6ajbl0kjf5rghiliim96wz53mfrjjvpc6piajs5ym"; depends=[rARPACK]; };
+  PPforest = derive2 { name="PPforest"; version="0.1.0"; sha256="1s0g8icyx30sih2xbdihp9xbmygfgd1hs642qdl5559fqshylbzs"; depends=[doParallel dplyr magrittr plyr Rcpp RcppArmadillo tidyr]; };
   PPtree = derive2 { name="PPtree"; version="2.3.0"; sha256="002qjdx52r2h90wzrf2r3kz8fv3nwx08qbp909whn6r4pbdl532v"; depends=[MASS penalizedLDA]; };
-  PPtreeViz = derive2 { name="PPtreeViz"; version="2.0.1"; sha256="02073yxdwns9mnnjvw13ydw1s3vrxl53szcd9jy8ibj78vnm57r3"; depends=[ggplot2 gridExtra partykit Rcpp RcppArmadillo]; };
-  PRIMME = derive2 { name="PRIMME"; version="2.1-0"; sha256="1sjgy923ppp28qhkvhgv2xmx7b7aqd17g60af1my44ygdsd8c1kw"; depends=[Matrix Rcpp]; };
+  PPtreeViz = derive2 { name="PPtreeViz"; version="2.0.3"; sha256="1x5rcls49jz19y3h98n2k4kypm8mv8p586clhdj62bvp2nl8wg3x"; depends=[ggplot2 gridExtra partykit Rcpp RcppArmadillo]; };
+  PRIMME = derive2 { name="PRIMME"; version="2.2-0"; sha256="1iwwh871v87fz6j6q9nvfiq8x8nz2v87n52l80a15d5rvvxv2rbi"; depends=[Matrix Rcpp]; };
   PRIMsrc = derive2 { name="PRIMsrc"; version="0.7.5"; sha256="12wfb4p8ra1b8xwq42350cxl2fy9gsrp5m7inyxnh31vplgripy9"; depends=[glmnet Hmisc quantreg superpc survival]; };
   PRISMA = derive2 { name="PRISMA"; version="0.2-6"; sha256="1yzcx4js0xaxp1mp7ginhfz8jji49rkw3x15a9mlmpz260gkfs98"; depends=[ggplot2 gplots Matrix]; };
   PRISMAstatement = derive2 { name="PRISMAstatement"; version="1.0.1"; sha256="1qk9cljk52m8rcasck8cl7gwzhcsx0p58jn31izy2j027w0rns7j"; depends=[DiagrammeR]; };
@@ -2416,24 +2473,26 @@ in with self; {
   PSCBS = derive2 { name="PSCBS"; version="0.63.0"; sha256="0pgha1rvb9nfxkr8fxc17zgws781qwmrl01rss7bd0sf2n2lw2k2"; depends=[aroma_light DNAcopy future listenv matrixStats R_cache R_methodsS3 R_oo R_utils]; };
   PSF = derive2 { name="PSF"; version="0.4"; sha256="1hjry8vjqr6zk2i2ppf3fcpsr4v4jm1705qv6i1iz2agl6g2rcnp"; depends=[cluster data_table forecast knitr]; };
   PSIMEX = derive2 { name="PSIMEX"; version="1.1"; sha256="0cndzasvg4y49incyd9nfz8y3z88ywbc7xk0zzjir665pv2xn23b"; depends=[knitr MCMCglmm pedigree plotrix]; };
-  PSLM2015 = derive2 { name="PSLM2015"; version="0.1.0"; sha256="1p5hygsqzk1r78ilxahyv43x1xvy9jnh2khmv9v8di5ir21asxga"; depends=[dplyr]; };
+  PSLM2015 = derive2 { name="PSLM2015"; version="0.2.0"; sha256="1f8kzlqil2ac8a9fbj9fhdni2narh2yaaz044mlx7gsv2ns3ai19"; depends=[dplyr ggplot2 magrittr]; };
   PSM = derive2 { name="PSM"; version="0.8-11"; sha256="1p1a8k0c44z75vsh55yni5gxmw6znxw4x1mjbgwj59y1k3pf2aiv"; depends=[deSolve MASS numDeriv ucminf]; };
+  PSPManalysis = derive2 { name="PSPManalysis"; version="0.1.1"; sha256="1mbgfblxflk12vr8y70a6avzjz9jh2m0wkmnzg0njgcwaqwvhlpm"; depends=[devtools]; };
   PST = derive2 { name="PST"; version="0.94"; sha256="0f28zrnlficbi9iil6wbh51k9mghpkz63hw05lpmlpx1yl5nd0a6"; depends=[RColorBrewer TraMineR]; };
   PSTR = derive2 { name="PSTR"; version="1.1.0"; sha256="1wzbwll5c2qsvngzqycg2zk6dghbr45mk8chj6kzzppmkk7vzj47"; depends=[ggplot2 snowfall tibble]; };
-  PSW = derive2 { name="PSW"; version="1.1-2"; sha256="1bq82czs32qwfmh8iim79cpwnlg8naqlpq1d64a2x1c50qkdzdla"; depends=[gtools Hmisc]; };
+  PSW = derive2 { name="PSW"; version="1.1-3"; sha256="0ahm7rp795d7j88n15b3q0gl573p3g0krc7jd1zv87g4bsdc9b5x"; depends=[gtools Hmisc]; };
   PTAk = derive2 { name="PTAk"; version="1.2-12"; sha256="1phxh2qbzsj2ia2dr6z30lhi765lk1m8lbk57sdgvm14fmi9v5nk"; depends=[tensor]; };
   PTE = derive2 { name="PTE"; version="1.6"; sha256="0y2zqvm2d9minpc22ndq6mar3brbv9k6s1apl19zwpc8h5g3jx5l"; depends=[doParallel foreach survival]; };
-  PTXQC = derive2 { name="PTXQC"; version="0.92.0"; sha256="1p9rkcgqbvd477p05fzg7ngdjwy8y7nzplpblz9z78y92y191nl9"; depends=[data_table ggdendro ggplot2 gridExtra gtable kableExtra knitr plyr proto RColorBrewer reshape2 rmarkdown seqinr yaml]; };
+  PTXQC = derive2 { name="PTXQC"; version="0.92.3"; sha256="1spkbjji36s2dlhm5b8svpnjmana2jy1ppa0pfgjg7rpsp3369xq"; depends=[data_table ggdendro ggplot2 gridExtra gtable kableExtra knitr plyr proto RColorBrewer reshape2 rmarkdown seqinr yaml]; };
+  PUlasso = derive2 { name="PUlasso"; version="2.2"; sha256="0chk26ll134fqvaqdwdnm49vbvklbrxm0j0qkcydm166p24k8n2z"; depends=[BH Matrix Rcpp RcppEigen]; };
   PVAClone = derive2 { name="PVAClone"; version="0.1-6"; sha256="0fj5p3z2cwnyshrr4rq88wpij2xax5p4aq0x4p342kadx9d6x2ga"; depends=[coda dclone dcmle]; };
   PWD = derive2 { name="PWD"; version="1.0"; sha256="0ksr3biaqd4p5a4lv28i4cwk1fn9822ndq2161mgvc1c344p06fj"; depends=[Rcpp RcppArmadillo]; };
   PWEALL = derive2 { name="PWEALL"; version="1.2.0"; sha256="0h7azgns88qwgdp41v35v6293xqs2hksbr82p15n754ci2hsvzja"; depends=[survival]; };
-  PWFSLSmoke = derive2 { name="PWFSLSmoke"; version="0.99.9"; sha256="019kggrp956jry59qg5s2jwy7mcg3vvjf9741q2zvxhr0dqn86ps"; depends=[cluster dplyr dygraphs futile_logger ggmap httr leaflet lubridate mapproj maps maptools MazamaSpatialUtils openair png RColorBrewer RCurl readr reshape2 RgoogleMaps sp stringr xts zoo]; };
+  PWFSLSmoke = derive2 { name="PWFSLSmoke"; version="1.0.10"; sha256="1c32bf7wlsmj0wqwcd6v4ghfrj6snaqa6q3a09p1gbvxd7mzs731"; depends=[cluster dplyr dygraphs futile_logger ggmap httr jsonlite leaflet lubridate magrittr mapproj maps maptools MazamaSpatialUtils openair png raster RColorBrewer readr reshape2 rgdal RgoogleMaps sp stringr xts zoo]; };
   PabonLasso = derive2 { name="PabonLasso"; version="1.0"; sha256="158xg9i13nqy1bnpch8r6a7yas01hsdidmcypgccmyh7d7l52mr1"; depends=[]; };
   Pade = derive2 { name="Pade"; version="0.1-4"; sha256="1kx5qpxd3x43bmyhk8g2af44hz3prhnrzrm571kfjmak63kym741"; depends=[]; };
   PairViz = derive2 { name="PairViz"; version="1.2.1"; sha256="0mjp5p6n5azbhrm2hvb9xyqjfhd49pw9ia8k70749yc96ws1qqc7"; depends=[graph gtools TSP]; };
-  PairedData = derive2 { name="PairedData"; version="1.0.1"; sha256="025h5wjsh9c78bg6gmg6p6kvv2s6d5x7fzn3mp42mlybq0ry78p0"; depends=[ggplot2 gld lattice MASS mvtnorm]; };
+  PairedData = derive2 { name="PairedData"; version="1.1.0"; sha256="1wga7cln8gvbvxycbbd859vq6gyjjvmcqvvzqmqdpwcdjf2j47gz"; depends=[ggplot2 gld lattice MASS mvtnorm]; };
   PairwiseD = derive2 { name="PairwiseD"; version="0.9.62"; sha256="19qjms99gf7s39nwwgj56n8426d0gw80dipz165sk3km4zb2mcwv"; depends=[openxlsx xlsx]; };
-  PakPC2017 = derive2 { name="PakPC2017"; version="0.3.0"; sha256="0cm6yjplc49qkvash9lswf0k6j92m0arwgk51y5xczixhz4xlg2n"; depends=[curl data_table]; };
+  PakPC2017 = derive2 { name="PakPC2017"; version="1.0.0"; sha256="196jvhv7pv4pvnnz9izk6icxv3aml26mif0w6g4907izyszf8cal"; depends=[dplyr magrittr]; };
   PakPMICS2014Ch = derive2 { name="PakPMICS2014Ch"; version="0.1.0"; sha256="0gjrx34613d9wzal292zfzh8hmkav271fqb0skdxd1f8rs2c79dg"; depends=[data_table]; };
   PakPMICS2014HH = derive2 { name="PakPMICS2014HH"; version="0.1.0"; sha256="1n6cyanqafscizgi1xqmc19w59yigxk5mvqinbivpdr7rydhrac6"; depends=[data_table]; };
   PakPMICS2014HL = derive2 { name="PakPMICS2014HL"; version="0.1.0"; sha256="18i5p54zmqxph0lkbgz4ahrbmi2jwhjwdca7aqvx9az18ki5c9sx"; depends=[data_table]; };
@@ -2448,8 +2507,9 @@ in with self; {
   ParamHelpers = derive2 { name="ParamHelpers"; version="1.10"; sha256="0nzsl3hby4dhnp7rw47zjmdrrfsgp5w1ai9fpw3bgc4k5sk9nql0"; depends=[BBmisc checkmate]; };
   ParentOffspring = derive2 { name="ParentOffspring"; version="1.0"; sha256="117g8h0k65f2cjffigl8n4x37y41rr2kz33qn2awyi876nd3mh93"; depends=[]; };
   ParetoPosStable = derive2 { name="ParetoPosStable"; version="1.1"; sha256="1fwji5wrhbxr089dll812csamvb5q2pxn1607rpirarifgfbj28m"; depends=[ADGofTest doParallel foreach lmom]; };
+  PartCensReg = derive2 { name="PartCensReg"; version="1.38"; sha256="16f64w7ngaj37n8imqqh50w15lrknr0w45ns7bg75lnap9y2qhml"; depends=[Matrix optimx ssym]; };
   Partiallyoverlapping = derive2 { name="Partiallyoverlapping"; version="1.0"; sha256="1wwfq0zwf2b2wlq4pwhw92d02f715l7bkc0si7gndk0mp2pibcrx"; depends=[]; };
-  PathSelectMP = derive2 { name="PathSelectMP"; version="1.0"; sha256="19gkd7il4whxp1mm4pinlrl8yj09b5sknz8c4g75n2hhh96libns"; depends=[mice MplusAutomation]; };
+  PathSelectMP = derive2 { name="PathSelectMP"; version="1.1"; sha256="036b70bpylmibny6dny79f7gdzn78arqgl2hfs031vygw63yyh9b"; depends=[mice MplusAutomation]; };
   PatternClass = derive2 { name="PatternClass"; version="1.7.1"; sha256="11r4p4s2pm0c4fmnpijzz5srhpai444mbx5nszhkssfsp9rh7cm9"; depends=[SDMTools]; };
   PdPDB = derive2 { name="PdPDB"; version="2.0.1"; sha256="05aqg0rqrnlmvjxa32ms1vywgwhw5zlfkyf2ij0fn06rp8l2z3lv"; depends=[dendextend plyr tseries]; };
   Peacock_test = derive2 { name="Peacock.test"; version="1.0"; sha256="0ypvwywipyh8lm8xkazsfjgjpvvyi2g8kid63qff11372p33m6xs"; depends=[]; };
@@ -2476,8 +2536,9 @@ in with self; {
   PersomicsArray = derive2 { name="PersomicsArray"; version="1.0"; sha256="1d5gxd65b01m13rgbdhk6w3l43vqcbdk0s1pbgc8h6cnipj55z0i"; depends=[jpeg raster stringr tiff]; };
   PhViD = derive2 { name="PhViD"; version="1.0.8"; sha256="038pw24sb8ja8pbbmj05rww6413i2ljybb2dxwgrpffv22aqawmc"; depends=[LBE MCMCpack]; };
   PharmPow = derive2 { name="PharmPow"; version="1.0"; sha256="0gabkd8p4zsig9p697lyk8m2jxb5abjk81rpzd5ih1yk1qanhsn5"; depends=[scatterplot3d]; };
+  Phase123 = derive2 { name="Phase123"; version="1.4"; sha256="1iw0xgfsvfzrhcnfxvq6rcwfcycyvc2bbg8d7g2spvvjk7aa4bwd"; depends=[Rcpp RcppArmadillo survival]; };
   PhaseType = derive2 { name="PhaseType"; version="0.1.3"; sha256="092dqyqfaxj8qpwxcjb5cayhnq597rfjz1xb93ps4nrczycqs0l6"; depends=[coda ggplot2 reshape]; };
-  PhenotypeSimulator = derive2 { name="PhenotypeSimulator"; version="0.1.3"; sha256="1gjhrdy3pd9y13akqcfp50h241lvlyxsrzd860jg11x7hgkzhzb1"; depends=[mvtnorm optparse plyr R_utils Rcpp snpStats]; };
+  PhenotypeSimulator = derive2 { name="PhenotypeSimulator"; version="0.2.0"; sha256="1vnissx2p10w2w435vr2jqw50cs5518l1gpq4pkyyxckcrd300w9"; depends=[data_table dplyr ggplot2 mvtnorm optparse R_utils Rcpp reshape2 snpStats zoo]; };
   Phxnlme = derive2 { name="Phxnlme"; version="1.0.0"; sha256="0h9mi8p95rp1s8xsdv38j9fpy2cy9zvjnldjmnj0n469kimp2782"; depends=[ggplot2 gridExtra lattice manipulate testthat]; };
   PhyInformR = derive2 { name="PhyInformR"; version="1.0"; sha256="10d720ww909b1xmdrms554pnn0757nzppnrniar4n157mh0qw7ms"; depends=[ape doParallel foreach geiger ggplot2 gplots gridExtra hexbin iterators PBSmodelling phytools RColorBrewer]; };
   PhySortR = derive2 { name="PhySortR"; version="1.0.7"; sha256="1xpxkd2bf3xdsfwa0bzkppr6y7p6v7s4iy0x0m8fiwj93n9jh0pz"; depends=[ape phytools]; };
@@ -2488,8 +2549,9 @@ in with self; {
   PieceExpIntensity = derive2 { name="PieceExpIntensity"; version="1.0.1"; sha256="0agy9jp5vbh6cj5mipbmn11m69w4ydz91nprph0jyf1drl92730h"; depends=[Rcpp RcppArmadillo]; };
   Pijavski = derive2 { name="Pijavski"; version="1.0"; sha256="1027lmmk17br9zxah980j6l3k2p92065bwigw6gpy9g0g5jjl4f1"; depends=[Rcpp]; };
   PivotalR = derive2 { name="PivotalR"; version="0.1.18.3"; sha256="14l7y57zmfr7h4bq01j83am2plxx320kkhbsh0x2ypif9dni4rf2"; depends=[Matrix]; };
+  PlackettLuce = derive2 { name="PlackettLuce"; version="0.2-2"; sha256="0lzgffw5kbx9psd68r7yigqv8dszjb2xkayxm3rhfs8jv9309yr0"; depends=[igraph MASS Matrix partykit psychotools qvcalc rARPACK sandwich]; };
   Planesmuestra = derive2 { name="Planesmuestra"; version="0.1"; sha256="0v7l4hrfckcf7zmk0ihq2ij0qli7x12j17vd6752d1yjk27fgk57"; depends=[]; };
-  PlasmaMutationDetector = derive2 { name="PlasmaMutationDetector"; version="1.6.2"; sha256="0b9m3qrv5nndqly9s4fjbwzkxdkwvai55yqrgbr91vagbmv17v9w"; depends=[GenomicRanges ggplot2 robustbase Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; };
+  PlasmaMutationDetector = derive2 { name="PlasmaMutationDetector"; version="1.6.10"; sha256="1dqc6k7mq9k6g9gndgjm6cf61mgl0liy4qwpzragbhq6lym8hw6w"; depends=[GenomicRanges ggplot2 robustbase Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; };
   Plasmidprofiler = derive2 { name="Plasmidprofiler"; version="0.1.6"; sha256="10m3knmz0596rm30ncyfprar6l42bjm7r34n4pjz1biqmiz6yz6k"; depends=[ape dplyr gdata ggdendro ggplot2 gridExtra gtable htmlwidgets magrittr plotly plyr RColorBrewer reshape2 stringr]; };
   Plasmode = derive2 { name="Plasmode"; version="0.1.0"; sha256="1qcni9zdckhsnw616jn7rdfd09kbl5wd4hljdja0w73jz1wd1z14"; depends=[arm epiDisplay foreign gbm glm2 lattice latticeExtra lme4 MASS Matrix mgcv nlme nnet RColorBrewer survey survival twang xtable]; };
   PlayerRatings = derive2 { name="PlayerRatings"; version="1.0-1"; sha256="0fdk70vfxgmf2hy6j0djbksi5znvilsi74rrbqd0lfhi841j15qj"; depends=[]; };
@@ -2498,19 +2560,20 @@ in with self; {
   PoSI = derive2 { name="PoSI"; version="1.0"; sha256="0c08czjvm09mcnkqnas4l22v22r9akgklnacx1j62smk4m546q2m"; depends=[]; };
   PogromcyDanych = derive2 { name="PogromcyDanych"; version="1.5"; sha256="1m6sycca44h8kdf9cd67annw6dxxwiscidzfnjrzqmqa4v6n7rsg"; depends=[dplyr SmarterPoland]; };
   PoiClaClu = derive2 { name="PoiClaClu"; version="1.0.2"; sha256="1j593sc344h9iy7if1ppihx2qd73dv32d77d8ckac43i7b2lig24"; depends=[]; };
-  PoisBinNonNor = derive2 { name="PoisBinNonNor"; version="1.1"; sha256="02xa028jrc50fmrasidjsh5h6z9i8gyyc68q6809ic1bs23sq06i"; depends=[BB corpcor Matrix mvtnorm]; };
-  PoisBinOrd = derive2 { name="PoisBinOrd"; version="1.2"; sha256="0ig3iqj0h2v4a4ahf8l2nfvjx4846skkdk5sb7qab8bkqqqkmbpy"; depends=[corpcor GenOrd Matrix mvtnorm]; };
-  PoisBinOrdNonNor = derive2 { name="PoisBinOrdNonNor"; version="1.3"; sha256="0cwp9zkw89bdvak7jrjmw0n1c1xkkw0kb1l5kn8vrpm7xkwzva8h"; depends=[BB corpcor GenOrd MASS Matrix]; };
-  PoisBinOrdNor = derive2 { name="PoisBinOrdNor"; version="1.4"; sha256="0sgj76crzb7byi0nbx50y0v8zr02b8jl1qfzapj46l2f8z78vkrm"; depends=[corpcor GenOrd Matrix mvtnorm psych]; };
-  PoisNonNor = derive2 { name="PoisNonNor"; version="1.3"; sha256="0p39sad9wiwrhgg9vdx0gzgd4kf2wwxjzmyav04q8ijbmqp0mjbw"; depends=[BB corpcor MASS Matrix]; };
-  PoisNor = derive2 { name="PoisNor"; version="1.1"; sha256="0z5h8rdb7kjqzasrdvkpkvwv05rfazv92cza8pln1qrvi6cdk5f3"; depends=[corpcor Matrix mvtnorm]; };
+  PoisBinNonNor = derive2 { name="PoisBinNonNor"; version="1.2"; sha256="0lvbkbpfm4iva7fmxm1hmma20hnbcsrd1jpy1kq3l60lmxk031wi"; depends=[BB corpcor Matrix mvtnorm]; };
+  PoisBinOrd = derive2 { name="PoisBinOrd"; version="1.3"; sha256="122z4mqig8hrqlislmazcpjg6q47pmi1pmpw93kyg81016p2gmxi"; depends=[corpcor GenOrd Matrix mvtnorm]; };
+  PoisBinOrdNonNor = derive2 { name="PoisBinOrdNonNor"; version="1.4"; sha256="14xmq1rcx901fd96aivq6m2vrcj8h1p1pxwkfjpn5dh4kqfy7921"; depends=[BB corpcor GenOrd MASS Matrix]; };
+  PoisBinOrdNor = derive2 { name="PoisBinOrdNor"; version="1.5"; sha256="03jgd2f7wvk7nhpkzrbjx8y4ymwgf53hxbz89ydmjk039flsp6x6"; depends=[corpcor GenOrd Matrix mvtnorm psych]; };
+  PoisNonNor = derive2 { name="PoisNonNor"; version="1.4"; sha256="1hmgwk6lr9pm06qp2n27n6j3i8q4m8zrc1hy061pix13k4idagz1"; depends=[BB corpcor MASS Matrix]; };
+  PoisNor = derive2 { name="PoisNor"; version="1.2"; sha256="0jpndpxajv598lpk2bx0np0yzfh1k903hpdadr4labpbjmr4pfrr"; depends=[corpcor Matrix mvtnorm]; };
   PoissonSeq = derive2 { name="PoissonSeq"; version="1.1.2"; sha256="1hhx0gv06cp6hm6h36mqy411qn9x15y45crpzbyf8crfs85c6gbg"; depends=[combinat]; };
   PoloniexR = derive2 { name="PoloniexR"; version="0.0.1"; sha256="1qik272z5lmzv9k1kfr5v0m8sydbdhbrc732n1zpwnqc1spfqb20"; depends=[anytime digest httr jsonlite RApiDatetime xts zoo]; };
   PolyPatEx = derive2 { name="PolyPatEx"; version="0.9.2"; sha256="1z1hwvsw7b6cz5xfy35a5ldrzb3fhp3swiyz56v1zqblpsaz8n9g"; depends=[gtools]; };
   PolyTrend = derive2 { name="PolyTrend"; version="1.2"; sha256="17n6phkzgaqrlzs8x1l5smnij1gxfklr0zj9pqfy5n8xqnpwssm5"; depends=[]; };
   Polychrome = derive2 { name="Polychrome"; version="1.0.0"; sha256="09yxrwh7a5hgq52jv2d0b0jvwbgm1f1dg6w4vziwdx5cwyny9psl"; depends=[colorspace rgl]; };
   PolynomF = derive2 { name="PolynomF"; version="1.0-1"; sha256="0sr5v43hp1ydy2230vm3mrg4pnnv7nivhnp3zni9svc8g0bd8z8p"; depends=[]; };
-  Pomic = derive2 { name="Pomic"; version="1.0.3"; sha256="16c0z50zlr9vb1g3j7zdgm2nx595mbwmr4hry184fvkv2hrkk4xc"; depends=[]; };
+  Pomic = derive2 { name="Pomic"; version="1.0.4"; sha256="0xy5fgimbgqqac3n7akhwyvnrvd9fpvx9h8nk4spxrxc8x0km1w7"; depends=[]; };
+  PooledMeanGroup = derive2 { name="PooledMeanGroup"; version="1.0"; sha256="0i9s7qskjnji3mf6clsi69rnni57v8cysgr9gh3hvxjzlf1sq8y7"; depends=[]; };
   PopED = derive2 { name="PopED"; version="0.3.2"; sha256="1lvzqpij4dqbw144ya25bhlx96mwaxz932r0bl3jsx1si9ijb8xz"; depends=[codetools dplyr ggplot2 MASS mvtnorm]; };
   PopGenKit = derive2 { name="PopGenKit"; version="1.0"; sha256="0l4mbm0cyppgvcw2cbimrv29aiciyj00k8wfwcj5zr8sh7fgfhs4"; depends=[]; };
   PopGenReport = derive2 { name="PopGenReport"; version="3.0.0"; sha256="0z4g7ll3dk9mgawnn7k0ysgj8w55adivc4zcrr898x399g7vnfx4"; depends=[ade4 adegenet calibrate data_table dismo gap gdistance genetics GGally ggplot2 knitr lattice mmod pegas plyr R_utils raster reshape rgdal RgoogleMaps sp vegan xtable]; };
@@ -2521,13 +2584,13 @@ in with self; {
   PortfolioEffectEstim = derive2 { name="PortfolioEffectEstim"; version="1.4"; sha256="1sfgkwyn7vfy3rqb1cglywiv5xmyxhzvj38vgrvfq5jf3hvzsg21"; depends=[PortfolioEffectHFT rJava]; };
   PortfolioEffectHFT = derive2 { name="PortfolioEffectHFT"; version="1.8"; sha256="0y4x0d91j6g52136d921hfs5swzf85gkxafxfkf3c15dl5ns120v"; depends=[ggplot2 rJava zoo]; };
   PortfolioOptim = derive2 { name="PortfolioOptim"; version="1.0.3"; sha256="1s9msqjxqxqafhncc3hi5prhzl5cj0incd5rc9fxc23l5l4n9xjx"; depends=[Rglpk]; };
-  PottsUtils = derive2 { name="PottsUtils"; version="0.3-2"; sha256="05ds0a7jq63zxr3jh66a0df0idzhis76qv6inydsjk2majadj3zv"; depends=[miscF]; };
+  PottsUtils = derive2 { name="PottsUtils"; version="0.3-3"; sha256="165k4sjh3kqkb8bzi68wx00yl77yfbgs70fcbpzmsmcw4g4hdpzn"; depends=[miscF]; };
   PoweR = derive2 { name="PoweR"; version="1.0.6"; sha256="0p2v07wp1hqmmbf7b3mh0v4n5hbbcms9xkdhjzdfxkkbafxybc24"; depends=[Rcpp RcppArmadillo]; };
   Power2Stage = derive2 { name="Power2Stage"; version="0.4-6"; sha256="1fzzvv3c7z9fb63l0wz9i0vd413mfn1dzw19kw7rnldv773lwir1"; depends=[mvtnorm PowerTOST]; };
   PowerNormal = derive2 { name="PowerNormal"; version="1.2.0"; sha256="1kryqcjvgwk0l4z3gqxdiz47mha3jw5583jlb9z7ml6v7cam06sm"; depends=[]; };
   PowerTOST = derive2 { name="PowerTOST"; version="1.4-6"; sha256="0fy9g1zkkxx45pz7axyhv9v9yajfwi19pxcr2bc9dih3j41kazjr"; depends=[cubature mvtnorm TeachingDemos]; };
-  PowerUpR = derive2 { name="PowerUpR"; version="0.1.3"; sha256="1znhkyxl8qrs288zf0cr6sxgq6ir029fmilda0k73scc6k1jxz7f"; depends=[nloptr]; };
-  PracTools = derive2 { name="PracTools"; version="0.7"; sha256="0xdszhfkmpdbii9h89lfdh5mbfyd232494p0nwq2wif47gfslcr0"; depends=[]; };
+  PowerUpR = derive2 { name="PowerUpR"; version="0.2.3"; sha256="046p4mrw50k1a0m672i2zx5vxfpyggiazp95qz8kx6bnq472ixp2"; depends=[]; };
+  PracTools = derive2 { name="PracTools"; version="0.8"; sha256="0hmdsm1ya6fw0f2fv4b85bkr35vlqmjf1sd9jmw1d4izpifv187h"; depends=[]; };
   PreKnitPostHTMLRender = derive2 { name="PreKnitPostHTMLRender"; version="0.1.0"; sha256="1749cd734f4bf0n4068s2m617k6as8h9bwp44mm3la2xy3vjf5g1"; depends=[knitr rmarkdown XML]; };
   PreProcess = derive2 { name="PreProcess"; version="3.1.4"; sha256="0zvy7wx9wfsdcvnjdr1angh0shqwhlm48byc0ymciqlx6xagaw0b"; depends=[oompaBase]; };
   PreciseSums = derive2 { name="PreciseSums"; version="0.1"; sha256="14d42n1wby1srrjyi0yc565g2ldmxy3r3z5bf7ki2x6snj569n0g"; depends=[]; };
@@ -2539,7 +2602,8 @@ in with self; {
   PrevMap = derive2 { name="PrevMap"; version="1.4.1"; sha256="1hmvfk5zpflwncaiy2rr0jr2gr2gk66na6ks82b6dfgk8xdc8xmk"; depends=[geoR Matrix maxLik numDeriv pdist raster splancs truncnorm]; };
   PrivateLR = derive2 { name="PrivateLR"; version="1.2-21"; sha256="1jwq8f0dnngj8sfbmcmxy34nkkq6yjw0mq3w1f8rasz67v3bwzp3"; depends=[]; };
   ProDenICA = derive2 { name="ProDenICA"; version="1.0"; sha256="04gnsnd0xzw3bfbssdp06bar0lk305ry2c97pmwxgiz3ay88dfsj"; depends=[gam]; };
-  ProFit = derive2 { name="ProFit"; version="1.0.2"; sha256="0wqm5c3syrpkbb7rwkfgfbva52a0bjbl8fl8rxi624vc4rwicr87"; depends=[fftw FITSio LaplacesDemon magicaxis R2Cuba RColorBrewer Rcpp]; };
+  ProFit = derive2 { name="ProFit"; version="1.1.0"; sha256="1r6afjz4ynds5aykn3vzg7k5pqqnsfbki8s4z49fv1y0gnr77zac"; depends=[celestial fftw FITSio LaplacesDemon magicaxis R2Cuba RColorBrewer Rcpp]; };
+  ProFound = derive2 { name="ProFound"; version="1.0.0"; sha256="1qv6bzd800xs26j49hsqv324nz2981imf2hnllf0rgpxcf382nhi"; depends=[celestial data_table FITSio magicaxis]; };
   ProNet = derive2 { name="ProNet"; version="1.0.0"; sha256="10r0gcxv0djrw99nd6a1jrnwvqmidw10ll645gvkp8l39li0107n"; depends=[igraph linkcomm MCL Rcpp]; };
   ProTrackR = derive2 { name="ProTrackR"; version="0.3.5"; sha256="19ilj03w5jpc1hw5avyb780iy3rdbby3kliym0si2zv6gyi9k541"; depends=[audio lattice signal tuneR XML]; };
   ProbForecastGOP = derive2 { name="ProbForecastGOP"; version="1.3.2"; sha256="0fnw3g19lx4vs8vmn4qdirvybkiy2cxkhwkn9qa3phz45iixnvx4"; depends=[fields RandomFields]; };
@@ -2549,10 +2613,10 @@ in with self; {
   ProfileLikelihood = derive2 { name="ProfileLikelihood"; version="1.1"; sha256="16cdp1nimhg1sd2x0qbffm7clgk54p0838y688z8lnsrjaggmb0x"; depends=[MASS nlme]; };
   ProgGUIinR = derive2 { name="ProgGUIinR"; version="0.0-4"; sha256="0srhk42ssx4i096sbs4jacqjsc1ffqjxjgvpplzshlqaby1h3795"; depends=[ggplot2 MASS svMisc]; };
   ProjectTemplate = derive2 { name="ProjectTemplate"; version="0.8"; sha256="0kagahw30m0drlda75hgwbpp7cqrxyf1512ar56qlgm8z73hab3n"; depends=[]; };
-  ProjectionBasedClustering = derive2 { name="ProjectionBasedClustering"; version="1.0.5"; sha256="00r6hy86v9j4n55kpbh410hlaiprz41ipgyrkvqcvrsd3c1qs0h9"; depends=[deldir GeneralizedUmatrix geometry ggplot2 Rcpp shiny shinyjs vegan]; };
+  ProjectionBasedClustering = derive2 { name="ProjectionBasedClustering"; version="1.0.6"; sha256="0hx8v18m0wymbjjccy8sm34sqchs9gsf6piyhbs50nm00dqiamv6"; depends=[deldir GeneralizedUmatrix geometry ggplot2 Rcpp shiny shinyjs vegan]; };
   ProliferativeIndex = derive2 { name="ProliferativeIndex"; version="1.0.0"; sha256="1baf4v9c2pqqmlgxs1jf7fhwqbsw0l1g7rdiia21acxix2j3b7wj"; depends=[]; };
   PropCIs = derive2 { name="PropCIs"; version="0.2-5"; sha256="0wnc5h4390w4rglr7gjh6827f5r7gdhajx1iwp5fggdlm808hgq7"; depends=[]; };
-  PropClust = derive2 { name="PropClust"; version="1.4-2"; sha256="13ac895i7ljayyqcjjmwvwar6wf1j0qssazcb5nlz8rw155qwavs"; depends=[dynamicTreeCut flashClust]; };
+  PropClust = derive2 { name="PropClust"; version="1.4-3"; sha256="0k1wn62vlrddzhknyjpizpqxzrgl38frncql3mrlwakkn0kh8l5z"; depends=[dynamicTreeCut flashClust]; };
   PropScrRand = derive2 { name="PropScrRand"; version="1.1"; sha256="0cj62dzg4zm8d1g8h7qmviiwm93cwplppbi0p674fmmf1wy84v9s"; depends=[]; };
   ProteinDescriptors = derive2 { name="ProteinDescriptors"; version="0.1.0"; sha256="1ydm8aym1wwxmfh4krh84nmj1wkgb574igg1sywl58l3qlnhya0l"; depends=[]; };
   Przewodnik = derive2 { name="Przewodnik"; version="0.16.12"; sha256="1aq80aqflfm1ypqa51h10mc3g0qdr651j6g1b7008k7h0ryq42gv"; depends=[PBImisc PogromcyDanych]; };
@@ -2565,12 +2629,11 @@ in with self; {
   PubMedWordcloud = derive2 { name="PubMedWordcloud"; version="0.3.5"; sha256="0vpd48daamd9q3mdr59sx7zj86qcq2yx8bnrzblyx0ryqx6jnq8m"; depends=[RColorBrewer RCurl stringr tm wordcloud XML]; };
   Publish = derive2 { name="Publish"; version="2017.10.24"; sha256="14zbbchff4mjvsxs9c2bypqdsfbnnl6lvr0k5v50wkd00avnv9s7"; depends=[data_table lava multcomp prodlim survival]; };
   PurBayes = derive2 { name="PurBayes"; version="1.3"; sha256="0nbm4cyrwfbwwbjbjkylr86cshaqbvbif6dkp4fag8kbcgyyx5qh"; depends=[rjags]; };
-  PwrGSD = derive2 { name="PwrGSD"; version="2.000"; sha256="0qxvws9mfrnqw5s24qhqk6cbffjm13z7awyxdmnilazghpiq1p7s"; depends=[survival]; };
-  PythonInR = derive2 { name="PythonInR"; version="0.1-3"; sha256="0p4h30wqsz8czz6r4xjg5q79190hq242x9fsaw7v5433px1gmr44"; depends=[pack R6]; };
-  QCA = derive2 { name="QCA"; version="3.0"; sha256="1fszjkjqwb7h5dpf92hgbyyv5hmhprv40viasykj671nkr13zpmc"; depends=[fastdigest shiny venn]; };
-  QCAGUI = derive2 { name="QCAGUI"; version="2.5"; sha256="1v15rd5wmdx1zdssklbchw71cr9v1mjp1mfkv5kg2xa3hp0x2hz9"; depends=[QCA]; };
+  PwrGSD = derive2 { name="PwrGSD"; version="2.2"; sha256="0z42l7vb3yya59g9rymypfzjbbs5zkknwgcl710rqa64l421sp8z"; depends=[survival]; };
+  PythonInR = derive2 { name="PythonInR"; version="0.1-4"; sha256="0krr5k0y9rggzq8f74nc6pyf47g8va1lvva31vc774hbb0rmr7gf"; depends=[pack R6]; };
+  QCA = derive2 { name="QCA"; version="3.1"; sha256="1nfwfv19rjqba28kmz9yk78zaq9jiiap8yhr0qcpf41q7381sn7q"; depends=[fastdigest shiny venn]; };
   QCAfalsePositive = derive2 { name="QCAfalsePositive"; version="1.1.1"; sha256="03qzb6vdnbri52gfx3laz14988p2swdv9m8i5z7gpsv3f3bjrxbp"; depends=[]; };
-  QCApro = derive2 { name="QCApro"; version="1.1-1"; sha256="0rp1mcgp21m4wi301kwb7vzilb4z0pq78h9wavkpyxnq0ch6hnlh"; depends=[lpSolve]; };
+  QCApro = derive2 { name="QCApro"; version="1.1-2"; sha256="1glfb1x1h05cs07nq5glqvlil58wp3c0kaxi1l7k94y797i8r7hq"; depends=[lpSolve]; };
   QCAtools = derive2 { name="QCAtools"; version="0.2.3"; sha256="1q49l2mf02hqvz2ahqjdx7i3yxniy7dn2s74xjl9l6zdq8bypfw2"; depends=[directlabels ggplot2 QCA stringr]; };
   QCEWAS = derive2 { name="QCEWAS"; version="1.1-0"; sha256="0snqg1q9848g8gmxxlz1fhw4cnfxwp28qkfyrpc0yzmkswvysx6v"; depends=[]; };
   QCGWAS = derive2 { name="QCGWAS"; version="1.0-8"; sha256="1wn1kddgfmqv326pihnavbgsbd2yxrlq5s2xgi6kbprssxvj8bk1"; depends=[]; };
@@ -2586,12 +2649,11 @@ in with self; {
   QPot = derive2 { name="QPot"; version="1.1"; sha256="1ivkk5wdd1lp6v4hwmpr9g230kd7zgmj0vnv5fw0svwpb8zzz14x"; depends=[MASS]; };
   QQperm = derive2 { name="QQperm"; version="1.0.1"; sha256="06xhv54zgnx8i22j23a0dqxhh7my416idpkkwq93qd1rdzgamzc8"; depends=[]; };
   QRAGadget = derive2 { name="QRAGadget"; version="0.1.0"; sha256="0vmhbpfbbpbcs6s9zjam893yl54spbx4x4698c504g96hcc19kkp"; depends=[htmlwidgets leaflet magrittr miniUI raster scales shiny sp]; };
-  QRFCCA = derive2 { name="QRFCCA"; version="1.0"; sha256="1h130fvdli57i3zhs51x96r77icpf00ffp7nf6k47gqy9lgbk4n3"; depends=[corpcor fda flare igraph MASS]; };
   QRM = derive2 { name="QRM"; version="0.4-13"; sha256="0zxhm1bdbs4jizd909vw9yjdn484vmcrwcmpk3a7gr4142q9kdjh"; depends=[gsl Matrix mgcv mvtnorm numDeriv Rcpp timeDate timeSeries]; };
   QRank = derive2 { name="QRank"; version="1.0"; sha256="1f924r5bf5vjfl12hk1n5m3f94g30f6vmvzq2bn8295dflyndck0"; depends=[quantreg]; };
   QRegVCM = derive2 { name="QRegVCM"; version="1.1"; sha256="01dhc0r1nialwv7dp2108znyc3ip1hswkcbpf3kmabxxj5y4vyvx"; depends=[quantreg SparseM truncSP]; };
   QSARdata = derive2 { name="QSARdata"; version="1.3"; sha256="0dhldnh0jzzb4assycc0l14s45ymvha48w04jbnr34lrwgr9krh4"; depends=[]; };
-  QTLRel = derive2 { name="QTLRel"; version="0.2-17"; sha256="0csn7xijzdw9wnsd7ilm3fjn2zrv87i8dqwvkm9d7qs5ssxsi44v"; depends=[gdata lattice]; };
+  QTLRel = derive2 { name="QTLRel"; version="1.0"; sha256="0hlnh04w45imf0f7rm9pg1whlps5zxh00qvvn81hip16bv48cw79"; depends=[gdata lattice]; };
   QUIC = derive2 { name="QUIC"; version="1.1"; sha256="021bp9xbaih60qmss015ycblbv6d1dvb1z89y93zpqqnc2qhpv3c"; depends=[]; };
   QVM = derive2 { name="QVM"; version="0.1.1"; sha256="0dnr4h4084n505vrxfrx3czrkqdbna8s4fxpwr5czfilbfbxhpar"; depends=[gWidgets IMPACT ltm multilevel mvtnorm nlme pander psych]; };
   QZ = derive2 { name="QZ"; version="0.1-6"; sha256="1vgqwv3rbnmz2sgbmbivgnxcwy5dzgk6ivqskdnqkil4f10zflmi"; depends=[Matrix]; };
@@ -2605,21 +2667,21 @@ in with self; {
   QuantifQuantile = derive2 { name="QuantifQuantile"; version="2.2"; sha256="01bdz8a6nhjil6n2z62x5g41v3d6md5v16g0ladsl5zc8raivqdq"; depends=[rgl]; };
   QuantileGradeR = derive2 { name="QuantileGradeR"; version="0.1.1"; sha256="1zwc6bg636gk8zll7wpznd3pzl611hcj2fmzp8b9505rra13p0g2"; depends=[]; };
   QuantumClone = derive2 { name="QuantumClone"; version="1.0.0.6"; sha256="1520jgkzp8g7gv7ggqhvlrdnpdyhygqjgsd1my5jq30afdqj6qmp"; depends=[DEoptim doParallel foreach fpc ggplot2 gridExtra NbClust optimx]; };
-  QuasiSeq = derive2 { name="QuasiSeq"; version="1.0-10-1"; sha256="05d47cc632sgi0bjwx408dq0nx7ylkf3l6ln4bf191l40hr1r4j7"; depends=[edgeR mgcv pracma uniqueAtomMat]; };
-  R_cache = derive2 { name="R.cache"; version="0.12.0"; sha256="006x52w9r8phw5hgqmyp0bz8z42vn8p5yibibnzi1sfa1xlw8iyx"; depends=[digest R_methodsS3 R_oo R_utils]; };
+  R_cache = derive2 { name="R.cache"; version="0.13.0"; sha256="1hf5cb7xvnca5zlh9245b5g62sgsaxwdhiv7x59yld37cydakm6k"; depends=[digest R_methodsS3 R_oo R_utils]; };
   R_devices = derive2 { name="R.devices"; version="2.15.1"; sha256="09gmzb87n1ybqwyp4jdpih3w3s7nqkr4hd1qhcqr57kp2pj9jp9x"; depends=[base64enc R_methodsS3 R_oo R_utils]; };
-  R_filesets = derive2 { name="R.filesets"; version="2.11.0"; sha256="0hjmd86zqsd9v17ma9r734pk9b0k53ayb52w5mm19d9hnl3wnv08"; depends=[digest future R_cache R_methodsS3 R_oo R_utils]; };
+  R_filesets = derive2 { name="R.filesets"; version="2.12.0"; sha256="16djdiwl4rpyhc75q2dpyfpzf2gwqkg9rbk99fbx69my1if0vs7w"; depends=[digest future_apply R_cache R_methodsS3 R_oo R_utils]; };
   R_huge = derive2 { name="R.huge"; version="0.9.0"; sha256="13p558qalv60pgr24nsm6mi92ryj65rsbqa6pgdwy0snjqx12bgi"; depends=[R_methodsS3 R_oo R_utils]; };
   R_matlab = derive2 { name="R.matlab"; version="3.6.1"; sha256="013qi3iikikgib23cqg74vpp2ymsbw1zd6zny7m1km2js6gmfchh"; depends=[R_methodsS3 R_oo R_utils]; };
   R_methodsS3 = derive2 { name="R.methodsS3"; version="1.7.1"; sha256="11z6v2i7jl647wxi9p5z66yvfnnqv6s7fxqmz7w2gkb6j8wl1f24"; depends=[]; };
   R_oo = derive2 { name="R.oo"; version="1.21.0"; sha256="0723gxjazgqq7v3lwnl7axw3brzcnizvhbd71ijkkv8mz31fwp34"; depends=[R_methodsS3]; };
-  R_rsp = derive2 { name="R.rsp"; version="0.41.0"; sha256="01l430avj5ggmdsla2kiriix72g0dlzx9klniq321bs0za808v3c"; depends=[R_cache R_methodsS3 R_oo R_utils]; };
+  R_rsp = derive2 { name="R.rsp"; version="0.42.0"; sha256="1zcq0hzi0j7fvj2rs796a1i120wbr0387vck17rrd644awwbsbm0"; depends=[digest R_cache R_methodsS3 R_oo R_utils]; };
   R_utils = derive2 { name="R.utils"; version="2.6.0"; sha256="03j7hrs03kyj9qrjxyp5kqv4lpqqpk6xwbkzx6j15d8928yrjr2x"; depends=[R_methodsS3 R_oo]; };
   R0 = derive2 { name="R0"; version="1.2-6"; sha256="1yvcgchxlj7hkgqkw6g8pxnracxkld1grgykkcr6wbhminbylqv8"; depends=[MASS]; };
   R1magic = derive2 { name="R1magic"; version="0.3.2"; sha256="1xfldr5y7pfdi6qljjvckknsv2wi9rnzwmqxkpgnyc96md2fvwjr"; depends=[]; };
-  R2BayesX = derive2 { name="R2BayesX"; version="1.1-0"; sha256="043hrznc16j6mkr3h9vjvi9yn6xn497xz5pjp53ks48pzz54jp9p"; depends=[BayesXsrc colorspace mgcv]; };
+  R2BayesX = derive2 { name="R2BayesX"; version="1.1-1"; sha256="1ff8cscl839ykp7l34sscc8zqp516mh64igk7dfv9n02l40w8ypf"; depends=[BayesXsrc colorspace mgcv]; };
   R2Cuba = derive2 { name="R2Cuba"; version="1.1-0"; sha256="1zmlsambajzxkc9dawlqb0png8s502hwblq0vyhqgc08yf29b43w"; depends=[]; };
   R2DGC = derive2 { name="R2DGC"; version="1.0.3"; sha256="0f84fmpf3m2s2p6bllvjs8rgnhwjy54adblv02dq8gakwvb4j2aw"; depends=[]; };
+  R2DT = derive2 { name="R2DT"; version="0.1"; sha256="0zydrdx6xdlacq6s01jwv4rv6ydmbwmiif40rilp8h76bim0kdbr"; depends=[data_table devFunc plyr]; };
   R2G2 = derive2 { name="R2G2"; version="1.0-2"; sha256="05d5vybvsi4pyr099916nk1l8sqszs9gaj2vhsx1jxxks8981na7"; depends=[]; };
   R2GUESS = derive2 { name="R2GUESS"; version="1.7"; sha256="07w54r5r9v7pa8aklmwbwdcc57j3a3b46b1a7mwmzcl11mcfwdph"; depends=[fields MCMCpack mixOmics mvtnorm snowfall]; };
   R2HTML = derive2 { name="R2HTML"; version="2.3.2"; sha256="00kxny7hajs9r2kw63qk7d03ggdxx2j1g8vbrmzp806y8aczvik9"; depends=[]; };
@@ -2635,7 +2697,6 @@ in with self; {
   R4CouchDB = derive2 { name="R4CouchDB"; version="0.7.5"; sha256="1wd1yqbs8m4zqvdm6x7mrcyk5b5pr4azm3r49nrilg8fnr2bk9rz"; depends=[bitops RCurl RJSONIO]; };
   R4dfp = derive2 { name="R4dfp"; version="0.2-4"; sha256="02crzjphlq4hi2crh9lh8l0acmc1rgb3wr1x8sn56cwhq4xzqzcb"; depends=[]; };
   R6 = derive2 { name="R6"; version="2.2.2"; sha256="13xfdr19ca7ymisidsanm6w7hsk3qmy5l8c0mlz3nk48f7s5cxq8"; depends=[]; };
-  R6Frame = derive2 { name="R6Frame"; version="0.1.0"; sha256="0ib0van2qk0p89qmii8naj1jx56i6j7srvydzm41pyq2xdg0bmga"; depends=[data_table lazyeval R6]; };
   RAC = derive2 { name="RAC"; version="1.1.1"; sha256="0ybyjjpw8f4wbdhkhbnjg8wy82ibxsywyjrsi406l2knnkx0mvmg"; depends=[matrixStats plotrix rstudioapi]; };
   RAD = derive2 { name="RAD"; version="0.3"; sha256="0nmgsaykxavq2bskq5x0jvsxzsf4w2gqc0z80a59376li4vs9lpj"; depends=[MASS mvtnorm]; };
   RADami = derive2 { name="RADami"; version="1.1-2"; sha256="1k4g58r64i19j8wj3d202283bnwaxf19l7ckiz29dlw4zidx6mvz"; depends=[ape Biostrings geiger hierfstat IRanges phangorn]; };
@@ -2650,41 +2711,44 @@ in with self; {
   RAP = derive2 { name="RAP"; version="1.1"; sha256="18dclijs72p6gxawpg8hk7n512ah4by5jfg2jnrp8mz79ajmdgir"; depends=[]; };
   RAPIDR = derive2 { name="RAPIDR"; version="0.1.1"; sha256="14cnw4jjs5anb55zlg1yj6qc9yr51rsamigq2q7h8ypj2ggnna1d"; depends=[Biostrings data_table GenomicAlignments GenomicRanges PropCIs Rsamtools]; };
   RAPTOR = derive2 { name="RAPTOR"; version="1.0.0"; sha256="1i3p3qa56ghcwh69vv3gnxnw13cbd99ms654j2bqr7g9qb7nl8vj"; depends=[mgcv]; };
-  RATest = derive2 { name="RATest"; version="0.1.1"; sha256="1mky2vpww263j7fvczxjb2l7ajgr8p0gznz9snhjlvglc70pgcxa"; depends=[ggplot2 gridExtra quantreg]; };
+  RATest = derive2 { name="RATest"; version="0.1.2"; sha256="0cxb82kzmywgslf6hfjl6v015s64jh483bzxnhph420mcp3ysbfk"; depends=[ggplot2 gridExtra quantreg]; };
   RAdwords = derive2 { name="RAdwords"; version="0.1.14"; sha256="18pnq248fy2i0an0r9liky2bqs0gdpjmw7b564hjpbkhin3fw669"; depends=[RCurl rjson]; };
   RApiDatetime = derive2 { name="RApiDatetime"; version="0.0.3"; sha256="0g5sdq6sl7cvsj9fgqhcdxjkrfi53078r0mbzvf69cvz38y5x3sm"; depends=[]; };
   RApiSerialize = derive2 { name="RApiSerialize"; version="0.1.0"; sha256="0gm2j8kh40imhncwwx1sx9kmraaxcxycvgwls53lcyy2ap344k9j"; depends=[]; };
   RAppArmor = derive2 { name="RAppArmor"; version="2.0.2"; sha256="18zmqqh4rnbnaiwi60jfp4xi8fp63ydr3jk9w4ijmy6s4hkpp75g"; depends=[]; };
   RArcInfo = derive2 { name="RArcInfo"; version="0.4-12"; sha256="1j1c27g2gmnxwslff4l0zivi48qxvpshmi7s9wd21cf5id0y4za4"; depends=[RColorBrewer]; };
   RAtmosphere = derive2 { name="RAtmosphere"; version="1.1"; sha256="0mk43bq28hlrjwaycsxca458k8xf00q58czgc17d8yx3kz17a5i0"; depends=[]; };
-  RBMRB = derive2 { name="RBMRB"; version="2.1.0"; sha256="09zhx06m7513w4srxkv0bmskm21m33zd28mscgzgma4ifbyxr55h"; depends=[data_table ggplot2 httr plotly rjson]; };
+  RBMRB = derive2 { name="RBMRB"; version="2.1.2"; sha256="1m6n2kfg83mlfy22k75hy5zjf547v0rdwk9w6l04yfyrr6himbr8"; depends=[data_table ggplot2 httr plotly rjson]; };
   RBPcurve = derive2 { name="RBPcurve"; version="1.2"; sha256="0zkfvnhm780vid4qqdrx9mnc6jxxrmrnq47pqvk35rm3m4l96782"; depends=[BBmisc checkmate mlr shape TeachingDemos]; };
-  RBesT = derive2 { name="RBesT"; version="1.2-3"; sha256="1d6m3r8amcw9rvivzgxgvsqjxq3xq78z2s29f20r6dxfl7wl7d99"; depends=[assertthat bayesplot BH checkmate dplyr Formula ggplot2 lme4 mvtnorm Rcpp RcppEigen rstan StanHeaders]; };
+  RBesT = derive2 { name="RBesT"; version="1.3-3"; sha256="0pink9jza2pfm1vqmzgp0pcyg9a4ak4c9igcxj692np82mv8hi0j"; depends=[assertthat bayesplot BH checkmate dplyr Formula ggplot2 lme4 mvtnorm Rcpp RcppEigen rstan StanHeaders]; };
   RCA = derive2 { name="RCA"; version="2.0"; sha256="0pidb5czrf0dc3ywy6cwm5akgsc62pvf94kfyxibzmd1favykx1h"; depends=[gplots igraph]; };
   RCALI = derive2 { name="RCALI"; version="0.2-18"; sha256="1d9pgkkghkzciawlzlggqk6qp9bh0akwgh1hc47akcnjvqlvxjd2"; depends=[splancs]; };
   RCEIM = derive2 { name="RCEIM"; version="0.3"; sha256="1kil5r88b6lf8vxmswz0wn0hhjxjm8jmlcl5kxjwl6fwjyy2z120"; depends=[]; };
   RCMIP5 = derive2 { name="RCMIP5"; version="1.2.0"; sha256="0bwp1ln0y48g2d0bj9b47y0rlwffzv0pi6gjfzv4sg5anhswc9x7"; depends=[abind assertthat digest dplyr Matrix]; };
   RCPmod = derive2 { name="RCPmod"; version="2.186"; sha256="0qxk6236xq391czyr043wn8rfml70gkc0xa6vz24s768gxmdk46l"; depends=[fishMod glmnet gtools MASS]; };
+  RCRnorm = derive2 { name="RCRnorm"; version="0.0.1"; sha256="0ac09d0rib4znyfilmq6555snd3bhwlysrqsdnh4qbpkdv3bhp61"; depends=[truncnorm]; };
   RCassandra = derive2 { name="RCassandra"; version="0.1-3"; sha256="0xa241s81cyw6lfjb522f2mlyrd0gav9yz3z5jab9hpdpgg9ri38"; depends=[]; };
   RChronoModel = derive2 { name="RChronoModel"; version="0.4"; sha256="0haqxwic160pnnm90bgchzxmsdwmi6m97i9xrh8js8bp2xn76l5f"; depends=[hdrcde]; };
   RCircos = derive2 { name="RCircos"; version="1.2.0"; sha256="0jj4jj9qnj7pils99hzw9yx5bwi182q4afdsqh7w7d9kzhp6xl3z"; depends=[]; };
-  RClickhouse = derive2 { name="RClickhouse"; version="0.3.0"; sha256="18d3nz83s15yv33vq6gwj4a5ys6n9c33c4virdx644hzzrq4i8fa"; depends=[DBI dbplyr dplyr Rcpp]; };
+  RClickhouse = derive2 { name="RClickhouse"; version="0.4.0"; sha256="0lb0sgs2f78y2z5ip2wqml88vykrwkdhn3i36y9hyrm34ackis6h"; depends=[DBI dbplyr dplyr Rcpp yaml]; };
   RClimMAWGEN = derive2 { name="RClimMAWGEN"; version="1.1"; sha256="0icy560llfd10mxlq0xmc6lbg6a030za9sygw1rpz8sk5j0lvb84"; depends=[climdex_pcic RMAWGEN]; };
   RClone = derive2 { name="RClone"; version="1.0.2"; sha256="1kv02acj0mk5102wvmdnxnkb7qig3jb9amcs4k2r26fpa4hyfa7f"; depends=[]; };
   RColorBrewer = derive2 { name="RColorBrewer"; version="1.1-2"; sha256="1pfcl8z1pnsssfaaz9dvdckyfnnc6rcq56dhislbf571hhg7isgk"; depends=[]; };
   RConics = derive2 { name="RConics"; version="1.0"; sha256="1lwr7hi1102gm8fi9k5ra24s0rjmnkccihhqn3byckqx6y8kq7ds"; depends=[]; };
   RCriteo = derive2 { name="RCriteo"; version="1.0.2"; sha256="1vyhnblw9zr5h6c25lf76p9vn95k8vr0hpq1sjkccdwl9yvsyhfy"; depends=[httr plyr RCurl XML]; };
-  RCurl = derive2 { name="RCurl"; version="1.95-4.8"; sha256="1yrbm8sypizy18qxkl6534fk2gf2ijxhahw6qldk9v5v3cjl68p7"; depends=[bitops]; };
+  RCrypto = derive2 { name="RCrypto"; version="0.1.0"; sha256="1lw7hq5ks36fixk0g3gcy4nw21ygwc14jq840hnhyds4glywfpvm"; depends=[dplyr httr jsonlite]; };
+  RCurl = derive2 { name="RCurl"; version="1.95-4.10"; sha256="02pyh6kvsfbwgccf8v77aa3ky21kps1rpgaii20wmridrgqj90vg"; depends=[bitops]; };
   RDIDQ = derive2 { name="RDIDQ"; version="1.0"; sha256="09gincmxv20srh4h82ld1ifwncaibic9b30i56zhy0w35353pxm2"; depends=[]; };
   RDML = derive2 { name="RDML"; version="0.9-9"; sha256="0amlr7mxp7175a7rd3jw7lhyvp3lnr01y81l27sl148sfb85zar6"; depends=[checkmate data_table lubridate pipeR R6 readxl rlist stringr xml2]; };
-  RDS = derive2 { name="RDS"; version="0.8-0"; sha256="1waqrnr3hlr1zyvs8qh14dmq8ax2nghnkvz6gs32dbvlirl7zmxk"; depends=[anytime ergm ggplot2 gridExtra Hmisc igraph isotone network reshape2 scales]; };
+  RDS = derive2 { name="RDS"; version="0.8-1"; sha256="18xn0ci35xs2myzj8rny6pp08cn8ljl3l4fdgaqp05fphgb5fh8j"; depends=[anytime ergm ggplot2 gridExtra Hmisc igraph isotone network reshape2 scales]; };
   RDSTK = derive2 { name="RDSTK"; version="1.1"; sha256="07vfhsyah8vpvgfxfnmp5py1pxf4vvfzy8jk7zp1x2gl6dz2g7hq"; depends=[plyr RCurl rjson]; };
   RDStreeboot = derive2 { name="RDStreeboot"; version="1.0"; sha256="10ry8rna450j389cplvyvgwljxa8lli7licwdin64b1kyzy2cdn7"; depends=[]; };
   RDataCanvas = derive2 { name="RDataCanvas"; version="0.1"; sha256="1aw19lmdphxwva5cs3f4fb8hllirzfkk48nqdgrarz32l11y5z5j"; depends=[jsonlite]; };
   RDieHarder = derive2 { name="RDieHarder"; version="0.1.3"; sha256="0wls7b0qfbi6hsq9xdywi4mdhim5b6mrzhvyrm9dxp9z1k7imz6m"; depends=[]; };
+  RDocumentation = derive2 { name="RDocumentation"; version="0.8.2"; sha256="0qdn3c5xbjyrhk56wfch50xpyyfd4f79hs0v00cqk9iwsnjlwmb5"; depends=[httr proto rjson]; };
   RDota2 = derive2 { name="RDota2"; version="0.1.6"; sha256="0fjsgg4dmzw2xwrf8jxq0f2d7f78bf67bl3ms5qcjk9kskfnymag"; depends=[httr jsonlite]; };
   REAT = derive2 { name="REAT"; version="1.3.2"; sha256="1vp103jwq6zf3w6bn3xvbh4zcgsdrwiycp23ab8mj42axk8pw5li"; depends=[]; };
-  REBayes = derive2 { name="REBayes"; version="1.1"; sha256="07fjhv07kbqw696iq66rj29l68anq370cw01d3xaswbbz09sg346"; depends=[Matrix reliaR Rmosek]; };
+  REBayes = derive2 { name="REBayes"; version="1.3"; sha256="0byd7587vddffplzp8kc2aakab61pck2r25rajxfn0rsvl5yvxyx"; depends=[Matrix reliaR Rmosek]; };
   RECA = derive2 { name="RECA"; version="1.3"; sha256="1v9ff2inxwpq91pjl6g9bpl9nmlyryp030g6abydikkhkcq3n74b"; depends=[]; };
   REDCapR = derive2 { name="REDCapR"; version="0.9.8"; sha256="14psw0sxlyig4nf968n997djwf80hgy5ia2g0bp8rdpn8lrj01g6"; depends=[data_table dplyr httr magrittr readr tibble tidyr]; };
   REEMtree = derive2 { name="REEMtree"; version="0.90.3"; sha256="01sp36p12ky8vgsz6aik80w4abs70idr9sn4627lf94r92wwwsbc"; depends=[nlme rpart]; };
@@ -2696,11 +2760,11 @@ in with self; {
   RESS = derive2 { name="RESS"; version="1.3"; sha256="1vddmifp47ia0sk35rnjpvw6gr9ygygafqczq268h17i1qs6ar22"; depends=[]; };
   REST = derive2 { name="REST"; version="1.0.1"; sha256="16v89z7p9qkg7bsypf9vkrnbmb2n7gw3fqnfzbyxwj496wzxdv1x"; depends=[Rcmdr]; };
   REdaS = derive2 { name="REdaS"; version="0.9.3"; sha256="09mmcvzgsxvrcq7sq3pw81pxgb1493p8lx8p5hhz8i42vshza6pn"; depends=[]; };
+  REddyProc = derive2 { name="REddyProc"; version="1.1.3"; sha256="1ixc3bdsqy1mavzpbgw9sxlbnkrmy7sbb7wizh5133gi4p2f2bdh"; depends=[dplyr logitnorm mlegp purrr Rcpp rlang tibble]; };
   REndo = derive2 { name="REndo"; version="1.3"; sha256="02hk2azmhdbr28vf8fglljiccij0284ypjzkk9yh23rw7pnbdk4g"; depends=[AER corpcor data_table e1071 gmm lme4 lmtest Matrix mvtnorm optimx plyr sandwich]; };
   RFGLS = derive2 { name="RFGLS"; version="1.1"; sha256="13ggxj74h5b2hfhjyc50ndxznkvlg18j80m78hkzwh25d3948fsk"; depends=[bdsmatrix Matrix]; };
   RFLPtools = derive2 { name="RFLPtools"; version="1.6"; sha256="1hl2crg7jl266zac41xvx151h7kl52346wnlvd8hba64s4s4apay"; depends=[RColorBrewer]; };
-  RFOC = derive2 { name="RFOC"; version="3.4-3"; sha256="04nm672pfrlqywhdpw0yrylwk3gqjfhxfdghf6af27ry6m3rjpcd"; depends=[GEOmap MASS RPMG RSEIS splancs]; };
-  RFc = derive2 { name="RFc"; version="0.1-2"; sha256="0zqnx9hbwp6j4y4r6mndgm95px07if93mpdmp3ls5kh4pnj2n6ff"; depends=[httr jsonlite sp]; };
+  RFOC = derive2 { name="RFOC"; version="3.4-6"; sha256="0cs5wmpvrlag9aisbfiwkvwcb3skv5z4sawl30krmsq49mzj7yhd"; depends=[GEOmap MASS RPMG RSEIS splancs]; };
   RFgroove = derive2 { name="RFgroove"; version="1.1"; sha256="1ank7jvmn83w0xzylf7i0fjb60mbrzzydspksfzcy16rkl6f5dvb"; depends=[fda randomForest wmtsa]; };
   RFinanceYJ = derive2 { name="RFinanceYJ"; version="0.3.1"; sha256="0qhmzsch7c2p0zckjkspsajzh8m10cf75ixjlgd0nj8rm41fngm3"; depends=[XML xts]; };
   RFinfer = derive2 { name="RFinfer"; version="0.2.0"; sha256="1cgdrg7gm8hdaaycipn8wjx7s4652jyy664n1my9qynmc56qib4n"; depends=[Matrix party pbapply randomForest]; };
@@ -2709,19 +2773,19 @@ in with self; {
   RFormatter = derive2 { name="RFormatter"; version="0.1.1"; sha256="0jmzdc2cl4vvffsyfwp493fiygh9xinhv970qxp1667rw8wlap8l"; depends=[formatR]; };
   RFreak = derive2 { name="RFreak"; version="0.3-0"; sha256="1dmllxb6yjkfkn34f07j2g7w5m63b5d10lh9xsmxyfk23b8l3x0x"; depends=[rJava]; };
   RGA = derive2 { name="RGA"; version="0.4.2"; sha256="0pjizgvrh0gbjlyxlb3v93nhigg8rpq3mziv1qlp6r0s5y7cmpi9"; depends=[httr jsonlite lubridate plyr]; };
-  RGBM = derive2 { name="RGBM"; version="1.0-7"; sha256="1amyf43jmm1zh04kj7w98v4iim5zw8zq0p851xjb9lvdkwhvpdfy"; depends=[doParallel foreach plyr]; };
+  RGBM = derive2 { name="RGBM"; version="1.0-8"; sha256="0xd64g07y808nzs4zvbx6bxdpbj2ndqg6yzc3p0l43pxm4hyxva0"; depends=[doParallel foreach plyr]; };
   RGCCA = derive2 { name="RGCCA"; version="2.1.2"; sha256="0zcxakqnmih0243y5b6r9nmcfanzxd6q344pd5bca5pnm3y43wr0"; depends=[Deriv MASS]; };
   RGENERATE = derive2 { name="RGENERATE"; version="1.3.5"; sha256="12dq04xpl06zhkzwqx3zy0bkpvb5phbdj2inxsyczf6d4dk209mb"; depends=[RMAWGEN]; };
   RGENERATEPREC = derive2 { name="RGENERATEPREC"; version="1.2"; sha256="1w28yfzk3ilbz1r9fsc76cigyrnzzhsfm3a81ff8g26za7cb8vjp"; depends=[blockmatrix copula Matrix RGENERATE RMAWGEN stringr]; };
+  RGF = derive2 { name="RGF"; version="1.0.0"; sha256="12x6nc7hvq16sg63b09xl2vxjd9cffxdl811ly2pmpr3i123h7fq"; depends=[Matrix R6 reticulate]; };
   RGIFT = derive2 { name="RGIFT"; version="0.1-5"; sha256="1745fs4bq0ss39fiwljspvrmnkgbbpc1fjvhvcrsmp2iizq12sgn"; depends=[]; };
   RGenetics = derive2 { name="RGenetics"; version="0.1"; sha256="0x5sspd67hh08qm62whlnnd838m0np29q3bfzgwp6j85lhil3jrx"; depends=[]; };
   RGeode = derive2 { name="RGeode"; version="0.1.0"; sha256="1g8ha6zg4pvi8qimiihsa6rjfdcyj0q526l44jajjbqczmwg59lv"; depends=[MASS Rcpp]; };
   RGoogleAnalytics = derive2 { name="RGoogleAnalytics"; version="0.1.1"; sha256="1049fyxl00izw92rm508p90asjp0agmv38b00yfbmasfzsp1r00s"; depends=[httr lubridate]; };
   RGoogleAnalyticsPremium = derive2 { name="RGoogleAnalyticsPremium"; version="0.1.1"; sha256="0d22pdd5kvnrspikfb66ny07pgx96rvykr0zi78rwn6g1symdb4q"; depends=[httr jsonlite lubridate]; };
   RGoogleFit = derive2 { name="RGoogleFit"; version="0.3.1"; sha256="0g4r5vb9zv6mqym1mh028ic9hkmlpklrhq4ks5sys7y60ps893k1"; depends=[bit64 httr jsonlite RCurl]; };
-  RGraphM = derive2 { name="RGraphM"; version="0.1.11"; sha256="0fj1ww4q3gl707id2qv4c2aw9cdbnhxxi6x6a72r3d0bbb0yl8l9"; depends=[Rcpp RcppGSL]; };
   RGraphics = derive2 { name="RGraphics"; version="2.0-14"; sha256="0bv95g17pvpq3nji0akphdaznh9k85hf5z78qypxwfqr76brxd05"; depends=[ggplot2 lattice]; };
-  RGtk2 = derive2 { name="RGtk2"; version="2.20.33"; sha256="0d5r0lrkk1ixhln94pm6d5d88bqs0h8p2sdczb7r7ah007ffmhic"; depends=[]; };
+  RGtk2 = derive2 { name="RGtk2"; version="2.20.34"; sha256="1yhdcd7f987bdd2y08dcx95i1hbfakgd8v1c606jxwr2dclyhx70"; depends=[]; };
   RGtk2Extras = derive2 { name="RGtk2Extras"; version="0.6.1"; sha256="19gjz2bk9dix06wrmlnq02yj1ly8pzhvr0riz9b08vbzlsv9gnk2"; depends=[RGtk2]; };
   RH2 = derive2 { name="RH2"; version="0.2.3"; sha256="1qbxy600fc8k2xl70liggdgg03ga6a8yad001banqzdmh508wcxl"; depends=[chron rJava RJDBC]; };
   RHMS = derive2 { name="RHMS"; version="1.3"; sha256="0pp67p8i6nsh9nvxsd1m453735s0whlril8l640m888zl6a3463j"; depends=[Hmisc pso]; };
@@ -2730,21 +2794,20 @@ in with self; {
   RHT = derive2 { name="RHT"; version="1.0"; sha256="1gxf8nhj3y92h8al7l3fxa45wc568kb3cykrbdjlsy2zjacf7fcc"; depends=[]; };
   RHawkes = derive2 { name="RHawkes"; version="0.0"; sha256="0qi32f6im6fsgvjs8bravc5z21557zn2d0a7i88dy0rri7czm5p7"; depends=[IHSEP]; };
   RI2by2 = derive2 { name="RI2by2"; version="1.3"; sha256="0smc0fb9anq5ih9zx2slfbqyx02njm0hc7g22gpfggskmxf2l509"; depends=[gtools Rcpp]; };
-  RIA = derive2 { name="RIA"; version="1.2.0"; sha256="0fyp1rz8xwq8jvp208yp4kx6v7jxcnj8dm923ii9jciy25q4i20i"; depends=[oro_dicom]; };
+  RIA = derive2 { name="RIA"; version="1.3.0"; sha256="0wz2c770faravsmlp3ivbw136x82l1i14ilikrdn7cn49bz0r5mh"; depends=[oro_dicom]; };
   RIFS = derive2 { name="RIFS"; version="0.1-5"; sha256="0705dhirh7bhy2yf3b1mpk3m7lggg4pwy640lvaspwaxkd6zac5w"; depends=[]; };
   RISmed = derive2 { name="RISmed"; version="2.1.7"; sha256="08dmkkxsmwp9b4h2g1bbx03cijn793fsnzkmbima8x9d42vxnm1l"; depends=[]; };
   RImageJROI = derive2 { name="RImageJROI"; version="0.1.1"; sha256="0a4sa60klbpl31qxxvjjbksdhvs3vwm9na1v7014v93fzxy6bjas"; depends=[spatstat]; };
   RImagePalette = derive2 { name="RImagePalette"; version="0.1.1"; sha256="054w8xzsn330qg7piq6ajhji9na2swkkdis2567cy3q099npfl5v"; depends=[ggplot2]; };
-  RImpala = derive2 { name="RImpala"; version="0.1.6"; sha256="03f4cq4bcrydpy78ypir7smj7abrcfynz0zzlgwgc60vh7vl79lz"; depends=[rJava]; };
-  RInSp = derive2 { name="RInSp"; version="1.2"; sha256="0zg46qw44wx17ydcz592gl4k9qq08dycmsshxxqkjf92r3g3l6wm"; depends=[]; };
+  RInSp = derive2 { name="RInSp"; version="1.2.3"; sha256="1nm29q2gysway4r7rdjr08m0w8lh2m9akhjh7swgjwrg4f15kfmy"; depends=[]; };
   RInside = derive2 { name="RInside"; version="0.2.14"; sha256="1ks9hs78s2vgdp9nfpzwifkqnh3vnaqwand51yh9r1zyjc4k9rcd"; depends=[Rcpp]; };
   RItools = derive2 { name="RItools"; version="0.1-15"; sha256="0f7g0w8bnbxryll48rnn7blgskgcdqqx9xv4fqmwcbkbasjz37va"; depends=[abind SparseM survival svd xtable]; };
-  RJDBC = derive2 { name="RJDBC"; version="0.2-5"; sha256="0cdqil9g4w5mfpwq85pdq4vpd662nmw4hr7qkq6510gk4l375ab2"; depends=[DBI rJava]; };
-  RJSDMX = derive2 { name="RJSDMX"; version="1.7"; sha256="13qd1ynxyyxsz11aiiqv47wlbygs5z3vsyw53fbcrcq4r34y4zx4"; depends=[rJava zoo]; };
+  RJDBC = derive2 { name="RJDBC"; version="0.2-7"; sha256="0db2s3qkkv16a4xskym8q3lv5s5jscwd5hh1pgl9bndb91wm9qj7"; depends=[DBI rJava]; };
+  RJSDMX = derive2 { name="RJSDMX"; version="1.9-3"; sha256="0myjhimx1p8ndyk60qgaw6csq58s4rxr67hgx9a5i1swsmlkwciz"; depends=[rJava zoo]; };
   RJSONIO = derive2 { name="RJSONIO"; version="1.3-0"; sha256="1dwgyiy19sixhy6yclqcaaxswbmpq7digyjjxhy1qv0wfsvk94qi"; depends=[]; };
   RJSplot = derive2 { name="RJSplot"; version="2.5"; sha256="0p2zqbq29pfjl703wqqjzgmif7yfzz7l8rzarjf5axkdy7w7fcyl"; depends=[]; };
   RJaCGH = derive2 { name="RJaCGH"; version="2.0.4"; sha256="1a8nd0w73dvxpamzi2addwr6q3rxhnnpa1girnlwbd1j1dll0bz6"; depends=[]; };
-  RJafroc = derive2 { name="RJafroc"; version="0.1.1"; sha256="1630f8nmpid5pax8gqxych8bqf8a1avgrk7yqisk3lf1yx3h68rq"; depends=[ggplot2 shiny stringr xlsx]; };
+  RJafroc = derive2 { name="RJafroc"; version="1.0.1"; sha256="16a8j4bw754ci8mxfhh3c3y5g53f2hr1l1mh05xw31asqcxzafrm"; depends=[bbmle binom caTools ggplot2 mvtnorm numDeriv Rcpp stringr xlsx]; };
   RKEA = derive2 { name="RKEA"; version="0.0-6"; sha256="1dncplg83b4zznh1zh90wr8jv5259cy93imrry86c5kqdijmhrrp"; depends=[rJava RKEAjars tm]; };
   RKEAjars = derive2 { name="RKEAjars"; version="5.0-3"; sha256="0sm7dkdprmqh319jc43ra7qbk4qq0b2kdj9zs9mjcjz58gcrkl7s"; depends=[rJava]; };
   RKEEL = derive2 { name="RKEEL"; version="1.1.22"; sha256="1k0xdy23za38lmav7hh9zchy9x61nkdm34s3cqrclzhf4nnlndfi"; depends=[arules doParallel foreach gdata Matrix pmml R6 rJava RKEELdata RKEELjars XML]; };
@@ -2768,24 +2831,24 @@ in with self; {
   RMThreshold = derive2 { name="RMThreshold"; version="1.1"; sha256="0wkc42vcggib002ad6ch43h6avpdgl12szrrrfd2p0wl72cwn5n1"; depends=[Matrix png]; };
   RMTstat = derive2 { name="RMTstat"; version="0.3"; sha256="1nn25q4kmh9kj975sxkrpa97vh5irqrlqhwsfinbck6h6ia4rsw1"; depends=[]; };
   RMallow = derive2 { name="RMallow"; version="1.0"; sha256="0prd5fc98mlxnwjhscmghw62jhq9rj5jk8qf4fnaa2a718yxf9b5"; depends=[combinat]; };
-  RMariaDB = derive2 { name="RMariaDB"; version="1.0-2"; sha256="1dgzj9awdd7jjfq3vygyjx5w7380jnq9b306b1cd89fp1w1dy05l"; depends=[BH bit64 DBI hms plogr Rcpp]; };
+  RMariaDB = derive2 { name="RMariaDB"; version="1.0-4"; sha256="0xzy1af1w0cjym48zlgdsngksp8j90b0197v78s5jkm1vxmr0ada"; depends=[BH bit64 DBI hms plogr Rcpp]; };
   RMark = derive2 { name="RMark"; version="2.2.4"; sha256="1vns8bl3fnk6hkwmm0wl2c6lgyv3vabsk07kkxrxrl1nzy11wj3a"; depends=[coda matrixcalc msm]; };
   RMediation = derive2 { name="RMediation"; version="1.1.4"; sha256="19idqx0hwljbcfrpqwa81k7cxbd8kv77ji8yi4n4p7517jbkzma6"; depends=[e1071 lavaan MASS]; };
-  RMixpanel = derive2 { name="RMixpanel"; version="0.6-2"; sha256="09z00ryyk3jx1s7p2d1rzvg84qhybv58d1n3cvjcmj07bv1h2dj1"; depends=[jsonlite RCurl uuid]; };
+  RMixpanel = derive2 { name="RMixpanel"; version="0.6-3"; sha256="025fg36jwq44y5m7msmjql3m0avc0hl0iw49wap0fvmzy5qn24qq"; depends=[base64enc jsonlite RCurl uuid]; };
   RMongo = derive2 { name="RMongo"; version="0.0.25"; sha256="1anybw64bcipwsjc880ywzj0mxkgcj6q0aszdad6zd4zlbm444pc"; depends=[rJava]; };
   RMySQL = derive2 { name="RMySQL"; version="0.10.13"; sha256="1j0vr2l4s02cg2hzgr3pla96pjj4h85sxw28lidy58rg5awnsf82"; depends=[DBI]; };
-  RNAseqNet = derive2 { name="RNAseqNet"; version="0.1.1"; sha256="145wp9wz2ir1ni36zrp53qzpdh4vz5j0f9h27w1vljrll6v0mwck"; depends=[ggplot2 glmnet hot_deck igraph PoiClaClu]; };
+  RNAseqNet = derive2 { name="RNAseqNet"; version="0.1.2"; sha256="07wk0i8iz3cvkiqawxhm61g3nka8adw0zrrv60zx329gg49w0ycl"; depends=[ggplot2 glmnet hot_deck igraph PoiClaClu]; };
   RNAsmc = derive2 { name="RNAsmc"; version="0.1.0"; sha256="02r8y43hrhjyhmim2yf7s4c46q8ys6b8qla9vwjqpmx5104v5v5g"; depends=[RRNA]; };
   RNAstructureModuleMiner = derive2 { name="RNAstructureModuleMiner"; version="0.1.0"; sha256="026r1h4z1jdfww0ay9iixa77ax6b19pgp589bbn77xg1vwjjlbsk"; depends=[RRNA]; };
   RNCBIEUtilsLibs = derive2 { name="RNCBIEUtilsLibs"; version="0.9"; sha256="1h1ywx8wxy6n2rbpmjbqw4c0djz29pbncisd0mlbshj1fw226jba"; depends=[rJava]; };
   RNCEP = derive2 { name="RNCEP"; version="1.0.8"; sha256="0nkx33997c5rgc3ch5a2bb6rrw5xw1y71rliygw5k1ldi335rsm7"; depends=[abind fields fossil maps RColorBrewer sp tgp]; };
   RND = derive2 { name="RND"; version="1.2"; sha256="1rl5apgw43c841z0lapi9z2jn979dvqh4x1qkqx1ad77zcq87c85"; depends=[]; };
   RNHANES = derive2 { name="RNHANES"; version="1.1.0"; sha256="045ykpgxvc22blbp47ysbk6a6x4akjd39pjr114cr23s7f48g6h4"; depends=[dplyr foreign rvest survey xml2]; };
-  RNOmni = derive2 { name="RNOmni"; version="0.1.4"; sha256="1jm88r9gvx16qh6y6cwlkha211bhb5yq5q6jvyfd9yhac865n9kd"; depends=[abind cowplot foreach ggplot2 microbenchmark mvtnorm RcppEigen reshape2]; };
+  RNOmni = derive2 { name="RNOmni"; version="0.1.5"; sha256="1lahwala3j0rcxdq1aswngqp89d4za167nrmsbj1lqscd7bn6qkd"; depends=[abind foreach mvtnorm RcppEigen]; };
   RNRCS = derive2 { name="RNRCS"; version="0.2.0"; sha256="1wg7ld6g94wby5lagf68h19qgx2mf0pc8rfvmnz4fac7xpdsg9s8"; depends=[ggplot2 magrittr rvest xml2]; };
   RNaviCell = derive2 { name="RNaviCell"; version="0.2"; sha256="15k8hkagn5520fy7x672fy329s2v7l0x44s44f6v7ql9mmg4b635"; depends=[RCurl RJSONIO]; };
   RNeXML = derive2 { name="RNeXML"; version="2.0.8"; sha256="0ikdv60nkhiv70x1crd21xd92iq2gshj6248m896v1l276513g5j"; depends=[ape dplyr httr lazyeval plyr reshape2 stringr taxize tidyr uuid XML]; };
-  RNeo4j = derive2 { name="RNeo4j"; version="1.6.4"; sha256="197ykvcfw1160ir6m568a4ksszyv5vlis2r0aygi155iz04j0bwm"; depends=[httr jsonlite rstudioapi]; };
+  RNentropy = derive2 { name="RNentropy"; version="1.1.2"; sha256="1xypz5whmjjqpg1zsd398v2y6adhh1js270355did397cmsgskk6"; depends=[]; };
   RNetCDF = derive2 { name="RNetCDF"; version="1.9-1"; sha256="0idfskxb1k8x0zzl6b0kgskdxn7zr49gw9xcj870ah9zp93iwnkx"; depends=[]; };
   RNetLogo = derive2 { name="RNetLogo"; version="1.0-4"; sha256="1z7jp454k197c0zbkn64zmf25wadkiznv3w2csgiz917cbx6xcn1"; depends=[igraph rJava]; };
   RNewsflow = derive2 { name="RNewsflow"; version="1.0.1"; sha256="1vxzcsiapnq8101iq4w73m9k8cq2khgcsxak71x72n295r7qpsd6"; depends=[data_table igraph Matrix plyr scales slam tm wordcloud]; };
@@ -2801,8 +2864,8 @@ in with self; {
   RODBCDBI = derive2 { name="RODBCDBI"; version="0.1.1"; sha256="0jkcc1lm8drsx1pkfj5h6rlbr98cgpvbf9ndzdwr048f3s8gd26i"; depends=[DBI RODBC]; };
   RODBCext = derive2 { name="RODBCext"; version="0.3.1"; sha256="06ky97k93bbrlxm4fg770mnz6yqp2zzgwmvzdqrpanfbg7qkfwwn"; depends=[RODBC]; };
   RODM = derive2 { name="RODM"; version="1.1"; sha256="0cyi2y3lsw77gqxmawla5jlm4vnhsagh3ykdgb6izxslc4j2fszx"; depends=[RODBC]; };
-  ROI = derive2 { name="ROI"; version="0.3-0"; sha256="1bnlxhpkk4zjrnfk65cpxxrnjbnigri60sijzsxf3dyndp6d9a2b"; depends=[registry slam]; };
-  ROI_models_globalOptTests = derive2 { name="ROI.models.globalOptTests"; version="1.0"; sha256="1zyzdxxl5fryxmh0f7721m825vdsv1wykvb3vcrd49dvkjz2lhr9"; depends=[globalOptTests ROI]; };
+  ROI = derive2 { name="ROI"; version="0.3-1"; sha256="00mi22z7gs77pixi4090l5wh67s2pfm45cf3bmy7p3c3nlim24fp"; depends=[registry slam]; };
+  ROI_models_globalOptTests = derive2 { name="ROI.models.globalOptTests"; version="1.1"; sha256="0cr4iy4p590zsp47jqyrvhamc4xa9nkpnnddmwqbkgvzmzxf83ap"; depends=[globalOptTests ROI]; };
   ROI_models_miplib = derive2 { name="ROI.models.miplib"; version="0.0-1"; sha256="1viqr0dqza9386m9xmfdm5riaczp4izf3bd2jk70cmdgypjj6mzg"; depends=[R_utils Rglpk ROI]; };
   ROI_models_netlib = derive2 { name="ROI.models.netlib"; version="1.0"; sha256="13ai7zkd00a03vyzfy1sm64cx8328xzwz5v8yw0shkdz5rchaq2d"; depends=[ROI]; };
   ROI_plugin_alabama = derive2 { name="ROI.plugin.alabama"; version="0.3-0"; sha256="0k012kv29hxw61iy1r06h70aiiqxrpmv62i4va80vmdfa2zr8zjg"; depends=[alabama ROI]; };
@@ -2812,7 +2875,7 @@ in with self; {
   ROI_plugin_ecos = derive2 { name="ROI.plugin.ecos"; version="0.3-0"; sha256="1b5lbnynzkfj9wys8v8ly6g0fijk9vs6kk4pzgfp6pladdq3y35v"; depends=[ECOSolveR Matrix ROI slam]; };
   ROI_plugin_glpk = derive2 { name="ROI.plugin.glpk"; version="0.3-0"; sha256="1a1vag47lfhiqmplrbkp95k36angpi9nvh0jd4cgy5y2416w22hn"; depends=[Rglpk ROI]; };
   ROI_plugin_ipop = derive2 { name="ROI.plugin.ipop"; version="0.2-5"; sha256="0xampxba8s9kigxv4xj6nb8a7a02w1aj4ansj99z8m7qg0bg2ivv"; depends=[kernlab ROI slam]; };
-  ROI_plugin_lpsolve = derive2 { name="ROI.plugin.lpsolve"; version="0.3-0"; sha256="0j5iwxgip343pib6hd29s63wp6z6lkrq75ngaydyvfzlk8hr66v0"; depends=[lpSolveAPI ROI]; };
+  ROI_plugin_lpsolve = derive2 { name="ROI.plugin.lpsolve"; version="0.3-1"; sha256="0i1skxk88s8cgxbr2hl5z8h88aqchrfs3206dfb92libw3yi1vas"; depends=[lpSolveAPI ROI]; };
   ROI_plugin_msbinlp = derive2 { name="ROI.plugin.msbinlp"; version="0.3-0"; sha256="00zvjqq2sj7iaymc0lrf5lmqfbqilwh8llmq841lvsmbps45w41k"; depends=[ROI slam]; };
   ROI_plugin_nloptr = derive2 { name="ROI.plugin.nloptr"; version="0.3-0"; sha256="0niq0q08033vcm59wflilii7lciqixcpf13a93hgdaypdca8lxcw"; depends=[nloptr ROI]; };
   ROI_plugin_optimx = derive2 { name="ROI.plugin.optimx"; version="0.3-0"; sha256="0hwjgwmaclq6y5mfmykjrchpyb632qzwcvvs1nnanmrh3yhfmpg9"; depends=[optimx ROI]; };
@@ -2822,52 +2885,54 @@ in with self; {
   ROMIplot = derive2 { name="ROMIplot"; version="1.0"; sha256="1njbsvnz7wrsv9l1p70p1ygmckaibz5i6jmvb0sfalp5jdcgl85n"; depends=[MortalitySmooth RCurl]; };
   ROSE = derive2 { name="ROSE"; version="0.0-3"; sha256="12b9grh3rgaa07blbnxy8nvy5gvpd45m43bfqb3m4k3d0655jpk2"; depends=[]; };
   RObsDat = derive2 { name="RObsDat"; version="16.03"; sha256="06d4svg4crgscn3wyg1fi8v46wlhlrgdrbfiv8ak4a5k5z0gws94"; depends=[DBI e1071 sp spacetime vwr xts zoo]; };
+  ROlogit = derive2 { name="ROlogit"; version="0.1.1"; sha256="1bmhq3vcrfxl7flr28x5yhk8akfv59c0xs10s73dchf1qqjfz5ld"; depends=[evd survival]; };
   ROpenDota = derive2 { name="ROpenDota"; version="0.1.1"; sha256="0d9a8c008bgzcd1hqly2h010f25xgs2s430hk90yq7vvqr3lmxl7"; depends=[jsonlite RCurl]; };
   ROpenFIGI = derive2 { name="ROpenFIGI"; version="0.2.8"; sha256="0fvd25vsqkgi3jv4s2lnfag5qksyzyb48d7rhfw6z8piz37n4xaj"; depends=[httr jsonlite]; };
   ROpenWeatherMap = derive2 { name="ROpenWeatherMap"; version="1.1"; sha256="0h1yw93v06bx8svhghh1fsrf837qax9896klh64b06djpgg9ngb9"; depends=[httr jsonlite RCurl]; };
   ROptEst = derive2 { name="ROptEst"; version="1.0.1"; sha256="0160xs3bmk1bdan7gkibc50qfzxlmi413grvs0bib74xlr0x2kgj"; depends=[distr distrEx distrMod RandVar RobAStBase startupmsg]; };
   ROptEstOld = derive2 { name="ROptEstOld"; version="0.9.2"; sha256="0blf34xff9pjfy983xm7a27xqkh9173nk64ysas6f0g4h31gh8ax"; depends=[distr distrEx evd RandVar]; };
   ROptRegTS = derive2 { name="ROptRegTS"; version="0.9.1"; sha256="1a8pbn63wh2w2n409yzbwvarvhphcn82rdqjh407ch3k3x6jz3r5"; depends=[distr distrEx RandVar ROptEstOld]; };
-  ROptSpace = derive2 { name="ROptSpace"; version="0.1.1"; sha256="01n99hsph4p4hvh9wimh7p3g38ww1bcdh6v4rd1hj18964v166a2"; depends=[]; };
+  ROptSpace = derive2 { name="ROptSpace"; version="0.1.2"; sha256="0g5v4kf5kkylc3agizv2r534dnbgkjap1x146hdgl4jx2ggddnfk"; depends=[Rdpack]; };
   ROptimizely = derive2 { name="ROptimizely"; version="0.2.0"; sha256="059zfn6y687h989wryvpqwgnp9njrrr4ys0gf1ql4pw85b2c50dy"; depends=[httr jsonlite]; };
   ROracle = derive2 { name="ROracle"; version="1.3-1"; sha256="07zqzwaq5iqkjcmns2ahl1l71xjlznialb3dbyl4lwsh3p3fhf2n"; depends=[DBI]; };
   RPANDA = derive2 { name="RPANDA"; version="1.3"; sha256="0rah5l5nfjs65zxgsgsy3q3vaph6qkr7p41x3arfhjsyma96p0zn"; depends=[ape BioGeoBEARS cluster corpcor deSolve fpc igraph mvMORPH mvtnorm phytools picante pspline pvclust TESS]; };
   RPCLR = derive2 { name="RPCLR"; version="1.0"; sha256="03kpyszsjb656lfwx2yszv0a9ygxs1x1dla6mpkhcnqw00684fab"; depends=[MASS survival]; };
   RPEXE_RPEXT = derive2 { name="RPEXE.RPEXT"; version="0.0.1"; sha256="0m5ml8ywxrf66mjz6m3xp1lajd7wdq9g7xsaln8n7ykq7h5615fc"; depends=[]; };
   RPEnsemble = derive2 { name="RPEnsemble"; version="0.4"; sha256="0y9g22swcz0m5jbzi87ahxw27fb3jlf3iwvxb73kkzixqlvksw9y"; depends=[class MASS]; };
-  RPMG = derive2 { name="RPMG"; version="2.2-1"; sha256="03gqam7lp6ycrwm30gdwh2irqkcviwzk74ysyxff7b23ng4jkz1j"; depends=[]; };
+  RPMG = derive2 { name="RPMG"; version="2.2-2"; sha256="1hyqhyn8g43cpdvh3iyrf12dbyafp6gv64hb53hr0h1094hrvz81"; depends=[]; };
   RPMM = derive2 { name="RPMM"; version="1.25"; sha256="1j48dh434wfhfzka0l21w6f73qlwfm70r9gdddhn504i2d5m4jph"; depends=[cluster]; };
   RPPairwiseDesign = derive2 { name="RPPairwiseDesign"; version="1.0"; sha256="0k2vh698rhs5a0b5vhyvrnnwqnagdzs591zx6hn9vbmm8rm4y1dm"; depends=[]; };
-  RPPanalyzer = derive2 { name="RPPanalyzer"; version="1.4.4"; sha256="0gi3zknxgxxmxjmb238vd64yqg02fv4qdirn2xf5badlqzwv3r71"; depends=[Biobase gam ggplot2 gplots Hmisc lattice limma quantreg]; };
+  RPPanalyzer = derive2 { name="RPPanalyzer"; version="1.4.5"; sha256="0cf4mb7mjp7x3k7083c8n8fjbvrmcgq359wh6pdyj817mgkanqzv"; depends=[Biobase gam ggplot2 gplots Hmisc lattice limma quantreg]; };
   RPostgreSQL = derive2 { name="RPostgreSQL"; version="0.6-2"; sha256="1mdhw5821v2h7hpa53v10wz53k4i90r0vb6a3dia5gq8f9j1h088"; depends=[DBI]; };
+  RPostgres = derive2 { name="RPostgres"; version="1.0-4"; sha256="0ymlz5av86xy434mr319p2sw7gl42dpj5vfi83wfiq1qri2vvx23"; depends=[BH bit64 blob DBI hms plogr Rcpp withr]; };
   RPresto = derive2 { name="RPresto"; version="1.3.0"; sha256="01w832ia4c44nhir5rzw33qa8h7afmf04vkfdlg32jaqi1gv5861"; depends=[DBI httr jsonlite openssl Rcpp stringi]; };
   RProtoBuf = derive2 { name="RProtoBuf"; version="0.4.11"; sha256="0q05hdlbgbjydi0x80kgfayfkisalvmb9wy1n6afcw66pbikyb4l"; depends=[Rcpp RCurl]; };
   RPtests = derive2 { name="RPtests"; version="0.1.4"; sha256="1r30pslbjq3dip41la81jlin2vhxdmayg902x9ryjy554awfgh7j"; depends=[glmnet randomForest Rcpp]; };
   RPublica = derive2 { name="RPublica"; version="0.1.3"; sha256="1w2pn1g44a00ls8kkzj53a739pq6vzp38px2k0yh10rlzimmb21l"; depends=[curl httr jsonlite]; };
   RPushbullet = derive2 { name="RPushbullet"; version="0.3.1"; sha256="15cb1zlfnjaf5z4dqx3xrkbkja152ah7jhs21qhvfl20qz4cyh7r"; depends=[curl jsonlite]; };
   RQDA = derive2 { name="RQDA"; version="0.3-0"; sha256="0p060wilvmz5wyahbga6gxkhs49rw8nb093bfrha7vhqhxnmdyqk"; depends=[DBI gWidgets gWidgetsRGtk2 igraph RGtk2 RSQLite]; };
-  RQGIS = derive2 { name="RQGIS"; version="1.0.2"; sha256="0q7qa9vk9vl6gig86cf5z8nypzxdlldgll2b9ircvnf15ii3wgz1"; depends=[raster RCurl readr reticulate rgdal sf sp stringr XML]; };
+  RQGIS = derive2 { name="RQGIS"; version="1.0.3"; sha256="0wrzjfxwciirl838lakcw7f6qyqyykqd999c9krll5krqzyq7c3c"; depends=[raster RCurl readr reticulate rgdal sf sp stringr XML]; };
   RQuantLib = derive2 { name="RQuantLib"; version="0.4.4"; sha256="1pki0c265nmgph9dbz2pyrq8h7295mxswavfdwsr7m1lpbpzk8s5"; depends=[Rcpp zoo]; };
   RRF = derive2 { name="RRF"; version="1.7"; sha256="1nxwqb0ybia8cglqlrbwnm9xzab6ayrn5f3j3l0kqszq1rvkfw95"; depends=[]; };
   RRNA = derive2 { name="RRNA"; version="1.0"; sha256="14rcqh95ygybci8hb8ays8ikb22g3850s9f3sgx3r4f0ky52dcba"; depends=[]; };
+  RRPP = derive2 { name="RRPP"; version="0.1.0"; sha256="1c29zgfhhssg7m1ckn45bdk1jcqxs4q68bf4rq3jg8h1805jql1h"; depends=[]; };
   RRTCS = derive2 { name="RRTCS"; version="0.0.3"; sha256="1riz1gjx3c0pf17xwybizb94nm5zgmfsnv6np3afvw831mb1x3l9"; depends=[sampling samplingVarEst]; };
   RRate = derive2 { name="RRate"; version="1.0"; sha256="1q3f2gphdf50aijnk5xqfpxcqfd4jq7byb1gpb0vcnaxgi3a9lwm"; depends=[]; };
   RRedshiftSQL = derive2 { name="RRedshiftSQL"; version="0.1.2"; sha256="03jbml8d19hcg6achnyc4hcnl5j10yvsx59j80r46zyn0flsnizq"; depends=[DBI RPostgreSQL]; };
-  RRreg = derive2 { name="RRreg"; version="0.6.2"; sha256="0cm1r34hqdil3d27670q6a5iixh3lg8r4rzam6mq4zf2fqiwdpb9"; depends=[doParallel foreach lme4]; };
+  RRreg = derive2 { name="RRreg"; version="0.6.5"; sha256="1hn69zqcafiq1fb38fl4gah90kim8pc2m35sbi1cgkgcbzz1vg16"; depends=[doParallel foreach lme4]; };
   RSA = derive2 { name="RSA"; version="0.9.11"; sha256="1hsjy755r78my6ib9s9da7mibcjxd5svh2kq0v7a466m60cyfrss"; depends=[aplpack ggplot2 lattice lavaan plyr RColorBrewer tkrplot]; };
   RSADBE = derive2 { name="RSADBE"; version="1.0"; sha256="1nzpm88rrzavk0n8iflsx8r3s1xcry15n80zqdw6jijjycz10w1q"; depends=[]; };
   RSAGA = derive2 { name="RSAGA"; version="0.94-5"; sha256="0lbvy1p6wcxnn70149wcpmfy2ijk6g37ka452dxm0w0zpg0zga1w"; depends=[gstat plyr shapefiles]; };
   RSAP = derive2 { name="RSAP"; version="0.9"; sha256="1sxirfabhpmfm0yiiazc9h1db70hqwva2is1dql6sjfanpl8qanl"; depends=[reshape yaml]; };
-  RSAgeo = derive2 { name="RSAgeo"; version="1.2"; sha256="1lgxcf5sd7aqk213s70mvi0kc4prm1w97m4wf3xjnvs7yc7mb5yz"; depends=[]; };
   RSCABS = derive2 { name="RSCABS"; version="0.9.2"; sha256="13l4ql40ahm06yi5a9zys62h5452fchkkhlhqh9gzh3pbpyjawgc"; depends=[gWidgets gWidgetsRGtk2 R2HTML RGtk2]; };
-  RSDA = derive2 { name="RSDA"; version="2.0.2"; sha256="17hymak1i9zkwdn9hv7diccs0vdbx16cwhaxyw89xsq3lwqfi2ap"; depends=[abind dplyr FactoMineR ggplot2 glmnet lazyeval nloptr pander princurve RJSONIO rlang scales scatterplot3d sqldf stringr tidyr XML xtable]; };
-  RSEIS = derive2 { name="RSEIS"; version="3.7-4"; sha256="0yz1lgq79chvcz70a82pyiy7s9z0af22pcnbkw629plzrxlpfppx"; depends=[RPMG Rwave]; };
+  RSDA = derive2 { name="RSDA"; version="2.0.3"; sha256="18rka6g93yksgnwgzy4planjvsmc4d5xzf4fxarv57v6frg37y98"; depends=[abind dplyr FactoMineR ggplot2 glmnet lazyeval nloptr pander princurve RColorBrewer RJSONIO rlang scales scatterplot3d sqldf stringr tidyr XML xtable]; };
+  RSEIS = derive2 { name="RSEIS"; version="3.7-8"; sha256="0f065jkdz91gi6l8y5y4m95vwgjsagrxx6r5982jbafi7zyqxm7j"; depends=[RPMG Rwave]; };
   RSGHB = derive2 { name="RSGHB"; version="1.1.2"; sha256="0b2v17p3a3sy8jc4vy0nq65sdkxyf0b8sf5f78yvdcn5knydah6c"; depends=[]; };
   RSIP = derive2 { name="RSIP"; version="1.0.0"; sha256="1yddqbnz0av69l53y83m7rnznc42qz66fc3qrispzaajs7p9n8d7"; depends=[ncdf4 raster rasterVis rgdal sp]; };
   RSKC = derive2 { name="RSKC"; version="2.4.2"; sha256="0r9gpwhzscb6rbba3dg13p78pvskahgvsd59biag0shyii3xvwpm"; depends=[flexclust]; };
   RSMET = derive2 { name="RSMET"; version="1.2.9"; sha256="1da7kck5g0vcd1ly7xaa1i8d9b1qjf6kwf35sq5d71hfbgx2fb4k"; depends=[stringr]; };
-  RSNNS = derive2 { name="RSNNS"; version="0.4-9"; sha256="08f2yyyc42jxqwyhvwakjkyillkc23chnk2b3bfzyxnb4pphbdfl"; depends=[Rcpp]; };
-  RSNPset = derive2 { name="RSNPset"; version="0.5.2"; sha256="11w2r1gfnzhqa5pwgy8nfs9s6lmln3cwkxxkid8fdg4b3ndwfl46"; depends=[doRNG fastmatch foreach qvalue Rcpp RcppEigen]; };
+  RSNNS = derive2 { name="RSNNS"; version="0.4-10"; sha256="1khsv1sy8jgsl9s5fypcg77lzj811xzrygwnq6ki9v375sk383gh"; depends=[Rcpp]; };
+  RSNPset = derive2 { name="RSNPset"; version="0.5.3"; sha256="1llx6anwkl4as0hdyvmsrlg9z8mkn9p1qxgs6kqs39w87gyx0j36"; depends=[doRNG fastmatch foreach qvalue Rcpp RcppEigen]; };
   RSPS = derive2 { name="RSPS"; version="1.0"; sha256="0ynxhgnxsf27qm8r5d9lyd59zksnc3kvx35hy25vff8j3bg7fqgi"; depends=[gridExtra lattice plyr]; };
   RSQLServer = derive2 { name="RSQLServer"; version="0.3.0"; sha256="1p3qds1ni8dm7cb45n4z5ppn3vsjk8mmqlvw76d301qfp3ja5zll"; depends=[assertthat DBI dbplyr dplyr purrr rJava yaml]; };
   RSQLite = derive2 { name="RSQLite"; version="2.0"; sha256="1xpg1i1jkzkzv44k512k90c2vvl960pl2d4a3spwcha6yclyc3vz"; depends=[BH bit64 blob DBI memoise pkgconfig plogr Rcpp]; };
@@ -2881,9 +2946,9 @@ in with self; {
   RSelenium = derive2 { name="RSelenium"; version="1.7.1"; sha256="04ghck76jh7w6kgzdszkzjwj9fhyngq13mf9iybavxph5wcy7xgq"; depends=[binman caTools httr openssl wdman XML]; };
   RSentiment = derive2 { name="RSentiment"; version="2.2.1"; sha256="0djp530yzj5a6y5nqk98pdvsgy9apqcqvkz0yjqx6856d9wrycm0"; depends=[NLP openNLP plyr stringr]; };
   RSiena = derive2 { name="RSiena"; version="1.2-3"; sha256="125qkh8j42zm8r4acxw20m6ylq6vksja3qz6zxyyvfd3l2vqb2gy"; depends=[lattice MASS Matrix]; };
-  RSiteCatalyst = derive2 { name="RSiteCatalyst"; version="1.4.13"; sha256="03993xck4274r6sxkzxlzcvwviafdb3d7icfn6f0xin4cnj6ry4m"; depends=[base64enc digest httr jsonlite plyr stringr]; };
+  RSiteCatalyst = derive2 { name="RSiteCatalyst"; version="1.4.14"; sha256="0h5s9vhihjlz44l61vm83zqavkglb6f304sb04n0vhzzl797l04c"; depends=[base64enc digest httr jsonlite plyr stringr]; };
   RSmartlyIO = derive2 { name="RSmartlyIO"; version="0.1.2"; sha256="0phkk79ng4r54w3d4ajl505gs8svlzdf1g6q50lhraq2cbllbvgx"; depends=[RCurl]; };
-  RSocrata = derive2 { name="RSocrata"; version="1.7.3-2"; sha256="17c5g8k5r60h6cgs2383fhi09lnm3kjm3pll4ma66ypjfbffzdpn"; depends=[httr jsonlite mime plyr]; };
+  RSocrata = derive2 { name="RSocrata"; version="1.7.4-7"; sha256="1cblp0fq7836jkb8cps3l1f8gx25bsdclkjvmxmd4b79y4hapiy2"; depends=[httr jsonlite mime plyr]; };
   RSpectra = derive2 { name="RSpectra"; version="0.12-0"; sha256="0aa33mhzj03gznpza5l5qj94s45imfhrgx52bsa8rq00f93fgaf0"; depends=[Matrix Rcpp RcppEigen]; };
   RSpincalc = derive2 { name="RSpincalc"; version="1.0.2"; sha256="09fjwfz1bzpbca1bpzxj18ki8wh9mrr5h6k75sc97cyhlixqd37s"; depends=[]; };
   RStata = derive2 { name="RStata"; version="1.1.1"; sha256="1wx6cz4567xkfplybmbwmw25snhlaxn48yi620cv6p5xqv458yp7"; depends=[foreign]; };
@@ -2896,25 +2961,25 @@ in with self; {
   RSwissMaps = derive2 { name="RSwissMaps"; version="0.1.0"; sha256="0p57pb3p6j0g4ngzikys9i4d02p4dc4k0s8k7r1wgdmdy2rak3k2"; depends=[downloader dplyr ggplot2]; };
   RTConnect = derive2 { name="RTConnect"; version="0.1.4"; sha256="1000jmmqzyhl6vh1ii75jdh88s9inaz52gvfwcin2k2zr7bi91ba"; depends=[]; };
   RTDE = derive2 { name="RTDE"; version="0.2-0"; sha256="1dj7dsj4256z9m70y2fpcgprxpqbgqxz0dqwn0jl80sj2325f66s"; depends=[]; };
-  RTOMO = derive2 { name="RTOMO"; version="1.1-5"; sha256="0wnxmzad2q5cpnqmglqh92clsk2c8fngd3gzh8f91alpj6nz69jp"; depends=[GEOmap RPMG RSEIS splancs]; };
+  RTOMO = derive2 { name="RTOMO"; version="1.1-6"; sha256="03jb96ahzgp662vj2v65giv8ss61vad5w26kvq8hg9q06z879jza"; depends=[GEOmap RPMG RSEIS splancs]; };
   RTaxometrics = derive2 { name="RTaxometrics"; version="2.3"; sha256="02446y86g21i37ycavg0xc1ggxk0k93d38n71fis9fav06lywxx3"; depends=[]; };
   RTextTools = derive2 { name="RTextTools"; version="1.4.2"; sha256="1j3zfywq8xgax51mbizxz704i3ys4vzp8hyi5kkjzq6g2lw7ywq2"; depends=[caTools e1071 glmnet ipred maxent nnet randomForest SparseM tau tm tree]; };
   RTextureMetrics = derive2 { name="RTextureMetrics"; version="1.1"; sha256="0d0mvpmcpd62cvqlajrqp32lnvpflyf9bqvdzly2v8v1kb8274fc"; depends=[]; };
-  RTransProb = derive2 { name="RTransProb"; version="0.1.0"; sha256="0q5fyf176pzjjdpyc5wpakpfnp48ckcpcparf6n99js2xgxc725g"; depends=[chron e1071 expm matrixStats nnet pracma zoo]; };
-  RTriangle = derive2 { name="RTriangle"; version="1.6-0.9"; sha256="1khwr62qdmgzkqzxqgkcjvxl1w8lnabqm68x18d5rk0hq3rpi1wj"; depends=[]; };
+  RTransProb = derive2 { name="RTransProb"; version="0.2.0"; sha256="0ka923kg52f7dv19z9vjb7m9ji12wk92kva41idryfignxpa2bkf"; depends=[chron e1071 expm MASS Matrix matrixStats nnet pracma Rcpp RcppArmadillo zoo]; };
+  RTriangle = derive2 { name="RTriangle"; version="1.6-0.10"; sha256="07ya95gmv53i2argqwgad6wd4sslql2wl1rkvsmgsvmhsb4wp9hd"; depends=[]; };
   RUnit = derive2 { name="RUnit"; version="0.4.31"; sha256="1jqr871jkll2xmk7wk5hv1z3a36hyn2ibgivw7bwk4b346940xlx"; depends=[]; };
-  RVAideMemoire = derive2 { name="RVAideMemoire"; version="0.9-68"; sha256="1gxh6w3b83szagirci84iik1ah0cvyzy4l61pnxli3abbzakzxc8"; depends=[ade4 boot car cramer dunn_test FactoMineR lme4 MASS mixOmics multcompView nnet pls pspearman vegan]; };
+  RVAideMemoire = derive2 { name="RVAideMemoire"; version="0.9-69"; sha256="1fcblvvpydczakvjsiz8ffcs8zid2ln6dbah0y9ha3xfzp2qcj4z"; depends=[ade4 boot car cramer dunn_test FactoMineR lme4 MASS mixOmics multcompView nnet pls pspearman vegan]; };
   RVFam = derive2 { name="RVFam"; version="1.1"; sha256="0gw8rgq11zndnqmay6y3y5rmmljvwhxzm2pqa90vs5413dnchq92"; depends=[coxme kinship2 lme4 MASS Matrix survival]; };
   RVPedigree = derive2 { name="RVPedigree"; version="0.0.3"; sha256="0v47bcdlcd0ydw4vffy1g9lj1azvyqwz4400nmlqshf9vqyhf9qq"; depends=[CompQuadForm doParallel foreach kinship2 ks Matrix snpStats]; };
   RVideoPoker = derive2 { name="RVideoPoker"; version="0.3"; sha256="06s4dlw0pw8rcq5b31xxqdpdk396rf27mai2vpvmn585vbm1ib7a"; depends=[pixmap rpanel tkrplot]; };
   RViennaCL = derive2 { name="RViennaCL"; version="1.7.1.7"; sha256="08mhn6732sb284y4garx0nvhad4r42pk39p3r82fad4c1c3rxkhg"; depends=[]; };
-  RVowpalWabbit = derive2 { name="RVowpalWabbit"; version="0.0.9"; sha256="1xvjl2mfknrb3jrvxxdza4l21sh76n6w6r12makvjkr9q0nal408"; depends=[Rcpp]; };
+  RVowpalWabbit = derive2 { name="RVowpalWabbit"; version="0.0.12"; sha256="1x3pq6cnkjashf49imrw76xkw9nzqgn9132l03l9v4vacgh0s47m"; depends=[Rcpp]; };
   RVsharing = derive2 { name="RVsharing"; version="1.7.0"; sha256="1z1jwj6dzyib8sxpz4p4wpiizfhxz6sp62nnig779rhnv7wfkqqf"; depends=[kinship2]; };
   RVtests = derive2 { name="RVtests"; version="1.2"; sha256="0k7w6ml981zvr5bix197qw4kaf7rz5jqnwqlxf7aryxbm39gk16c"; depends=[glmnet pls spls]; };
   RWBP = derive2 { name="RWBP"; version="1.0"; sha256="104vr2cdk185hh4zn3vmqvb14p1q8ifk11wdgvk7fli1m1zxxwdd"; depends=[igraph lsa RANN SnowballC]; };
   RWebLogo = derive2 { name="RWebLogo"; version="1.0.3"; sha256="1n65mlnr163ywjnyyngnigbj0wpgkr38c3nx8hw5r8mwjnf3d617"; depends=[findpython]; };
-  RWeka = derive2 { name="RWeka"; version="0.4-36"; sha256="0xmbyv5gnlr1hprshiydsi9vfiqwa887ddxp10b74g9ca2317qv9"; depends=[rJava RWekajars]; };
-  RWekajars = derive2 { name="RWekajars"; version="3.9.1-5"; sha256="0dxyj7j9w0678ay4xjs1jl18qmidgrzgcs471fffp1jb8fdv3b6h"; depends=[rJava]; };
+  RWeka = derive2 { name="RWeka"; version="0.4-37"; sha256="1q0riy7w2ighyy7fh1hj3q4wa0vbbn6h7nisgkyzwkcxkfq3n2pw"; depends=[rJava RWekajars]; };
+  RWekajars = derive2 { name="RWekajars"; version="3.9.2-1"; sha256="006n7m3qxnzvfhkzcr0nbwqdlhygzdhyp8x3534dx6075bm00v0f"; depends=[rJava]; };
   RWiener = derive2 { name="RWiener"; version="1.3-1"; sha256="0w12xvc18l002m8q6ad3laa667xzqjbcfqf0vvcmicgw2j3bbq6h"; depends=[]; };
   RWildbook = derive2 { name="RWildbook"; version="0.9.2"; sha256="1bzdj55v7g2vlffpdsxpl8gv4k1xxd3xl7h1whvq6q5x76lprw0g"; depends=[data_table jsonlite marked]; };
   RXKCD = derive2 { name="RXKCD"; version="1.8-2"; sha256="081zrx293z4009p6fj2za0mkf04nikxmg3i45l667qvy7nmajqlc"; depends=[jpeg png RJSONIO]; };
@@ -2924,6 +2989,7 @@ in with self; {
   RYoudaoTranslate = derive2 { name="RYoudaoTranslate"; version="1.0"; sha256="1i3iyqh97vpn02bm66kkmw52ni29js30v18n2aw8pvr88jpdgxm4"; depends=[RCurl rjson]; };
   RZabbix = derive2 { name="RZabbix"; version="0.1.0"; sha256="0c5803chpzvp7dk9pjfx5f0nqynb76ywakz04ah2nw07ypvcyjyr"; depends=[httr jsonlite]; };
   RZigZag = derive2 { name="RZigZag"; version="0.1.4"; sha256="1p0p9imdv40vw59m95x00zv9a3knl4m4gwlrbd2v93yzdc1n2a26"; depends=[Rcpp RcppEigen]; };
+  RaPKod = derive2 { name="RaPKod"; version="0.9"; sha256="1qxzi2lf431zd44bcd98ybhzydy1cz12g864l6r668jk91aqy1qg"; depends=[kernlab MASS proxy Rcpp RcppArmadillo]; };
   RadOnc = derive2 { name="RadOnc"; version="1.1.4"; sha256="1ri6ybzhfdgbrbfcy12mmvv2ipg61az7vwp1dbjyzs8mgsc1cxb5"; depends=[geometry oro_dicom ptinpoly rgl]; };
   RadTran = derive2 { name="RadTran"; version="1.0"; sha256="1sb8d4y3b37akbxhdavxrkp34zn3ip061b7gzy0ga57pyn76cvpn"; depends=[ReacTran rootSolve]; };
   RadioSonde = derive2 { name="RadioSonde"; version="1.4"; sha256="1v9jdpynmb01m3syhas1s08xxlvjawhlvjkyhils2iggi4xw4hiq"; depends=[]; };
@@ -2931,7 +2997,7 @@ in with self; {
   Ramble = derive2 { name="Ramble"; version="0.1.1"; sha256="0225za85i5nvf8l89i5bz7nxsxykd3v9fp1wgihmncca6n8vhgpl"; depends=[]; };
   Rambo = derive2 { name="Rambo"; version="1.1"; sha256="1yc04xsfkc54y19g5iwambgnlc49ixjjvfrafsgis2zh5w6rjwv8"; depends=[sna]; };
   RandMeta = derive2 { name="RandMeta"; version="0.1.0"; sha256="0bh3rkdfmwqym47q8f90pw3mmx7q8jyp4rz16ggqrmk1b5bdyqjb"; depends=[]; };
-  RandPro = derive2 { name="RandPro"; version="0.1.0"; sha256="10zb8xhcb54jscfnpz734c7kh43pgi3bb61yasi6rvlqd83g1zdn"; depends=[]; };
+  RandPro = derive2 { name="RandPro"; version="0.2.0"; sha256="1bhbg6lvgr9h6rq3g3ljm2422ngjb18maj80l7f659ql88c8h6mj"; depends=[caret e1071]; };
   RandVar = derive2 { name="RandVar"; version="1.0.1"; sha256="0vj0p46xmj4129m6r5zg85fnvb5kx1ardwwk55nqypkxd0v58a4j"; depends=[distr distrEx startupmsg]; };
   RandomFields = derive2 { name="RandomFields"; version="3.1.50"; sha256="0j7852wvclglp820y2x5r19gsr6ciygbbpl5qvwj1khnlz1hfsid"; depends=[RandomFieldsUtils sp]; };
   RandomFieldsUtils = derive2 { name="RandomFieldsUtils"; version="0.3.25"; sha256="0nxk7jhr61l9h76hf96f7ypakl4wip144c0gzr6rqsja6m75rjz3"; depends=[]; };
@@ -2945,19 +3011,19 @@ in with self; {
   RateDistortion = derive2 { name="RateDistortion"; version="1.01"; sha256="1micjlbir1v5ar51g1x7bgkqw9m8217qi82ii6ysgjkhwdvpm075"; depends=[]; };
   RatingScaleReduction = derive2 { name="RatingScaleReduction"; version="1.2"; sha256="0bw2j2wx0l56wp0k6fg8dddphggz0fycjzjydsd55rkg4zq6gpf3"; depends=[ggplot2 pROC]; };
   Rbent = derive2 { name="Rbent"; version="0.1.0"; sha256="0xkb57dhhfd3342rv0xwbhbhn4zp5fbfch84fbh0sickm09l9vrj"; depends=[Rfit]; };
+  Rbgs = derive2 { name="Rbgs"; version="0.2"; sha256="1q0dnbcpgx7x9klr6z33z6g2p9p8mrmhnsqjy6qw15ch720rrgn3"; depends=[imager magrittr rJava]; };
   Rbitcoin = derive2 { name="Rbitcoin"; version="0.9.2"; sha256="0ndq4kg1jq6h0jxwhpdp8sw1n5shg53lwa1x0bi7rifmy0gnh66f"; depends=[data_table digest RCurl RJSONIO]; };
-  Rblpapi = derive2 { name="Rblpapi"; version="0.3.6"; sha256="1n25dyggqlvgqjfq30022i5ydpzmli2bcw08kaidgp23l7f90ghh"; depends=[BH Rcpp]; };
+  Rblpapi = derive2 { name="Rblpapi"; version="0.3.8"; sha256="1d1b3rdp9zqz9x6xb7zmbs4yrz339qjvlhif7s8ifcz1zdpzzhal"; depends=[BH Rcpp]; };
   Rborist = derive2 { name="Rborist"; version="0.1-8"; sha256="0zr8vfbv11ascng7n2zv5xbqv7h0r0bycwn8bqlq8q10y2lyxg70"; depends=[Rcpp RcppArmadillo]; };
   Rcapture = derive2 { name="Rcapture"; version="1.4-2"; sha256="1nsxy5vpfv7fj03i6l5pgzjm0cldwqxxycnvqkfkshbryjcyl0ps"; depends=[]; };
   RcellData = derive2 { name="RcellData"; version="1.3-2"; sha256="1zzkgpj2pc42xzz5pspyj981a04gjpna4br3lxna255366ijgz4l"; depends=[]; };
   Rcereal = derive2 { name="Rcereal"; version="1.2.1"; sha256="0nl4p0wqpni16z62610sqcxsz1x6kannl2s1zakpmjkk80pyxlk6"; depends=[]; };
   RcextTools = derive2 { name="RcextTools"; version="0.1.1"; sha256="1rrij4ryspff9mn1c3jlzjprnipak7nzlb488pk0ci0awaccp5ga"; depends=[data_table igraph sqldf visNetwork]; };
   Rcgmin = derive2 { name="Rcgmin"; version="2013-2.21"; sha256="02igq7bdlxwa7ysfiyvqfhcvgm866lrp2z3060z5lmnp6afa0958"; depends=[numDeriv]; };
-  RchivalTag = derive2 { name="RchivalTag"; version="0.0.5"; sha256="03zjw60kjgqfyaaic097fzi72l7sw6cg1236lj3awfqw9z6dfb56"; depends=[akima mapdata maps maptools ncdf4 oceanmap PBSmapping plyr raster rgeos sp]; };
   Rchoice = derive2 { name="Rchoice"; version="0.3-1"; sha256="1mx50270vbhvng4vdcc6w94f3l890vjl41y07bqkv40n93fxvffw"; depends=[Formula maxLik msm plm plotrix]; };
   Rclusterpp = derive2 { name="Rclusterpp"; version="0.2.3"; sha256="02s5gmmmd0l98wd1y884pjl3h289dyd9p9s7dh7yl2zaslqs2094"; depends=[Rcpp RcppEigen]; };
   Rcmdr = derive2 { name="Rcmdr"; version="2.4-1"; sha256="1rm4vxc8bx2pnblprcxfnnmynig368xp4p4slhprnxvp8f61z9z9"; depends=[abind car effects RcmdrMisc relimp tcltk2]; };
-  RcmdrMisc = derive2 { name="RcmdrMisc"; version="1.0-6"; sha256="1afz5j96m1cyiwnbwsndkqhbn986bdbznzd2z64cygnqhb04gs70"; depends=[abind car colorspace e1071 foreign haven Hmisc MASS nortest readstata13 readxl sandwich]; };
+  RcmdrMisc = derive2 { name="RcmdrMisc"; version="1.0-7"; sha256="0s323wdqjbk15a9zsmhigixh06ayrwb7hgzscb9d2aq0ww6jgl2k"; depends=[abind car colorspace e1071 foreign haven Hmisc MASS nortest readstata13 readxl sandwich]; };
   RcmdrPlugin_BCA = derive2 { name="RcmdrPlugin.BCA"; version="0.9-8"; sha256="0xkip7q9i57ghgz0rh0pl8nkl7bflf4w1g4zbyjdlcjypyf7lnr8"; depends=[BCA car flexclust foreign nnet Rcmdr RcmdrMisc rpart rpart_plot]; };
   RcmdrPlugin_BiclustGUI = derive2 { name="RcmdrPlugin.BiclustGUI"; version="1.1.1"; sha256="1sdc8ibggz8wpn77g7hddyl7lg86dbyw8qax63p6cqx1pfhb4rra"; depends=[BcDiag BiBitR BicARE biclust fabia gplots iBBiG Rcmdr rqubic s4vd superbiclust viridis]; };
   RcmdrPlugin_DoE = derive2 { name="RcmdrPlugin.DoE"; version="0.12-3"; sha256="1iifn71kjjgcp7dfz2pjq57mgbv4rrznrl3b3k9gdc2dva1z9zvc"; depends=[DoE_base DoE_wrapper FrF2 Rcmdr RcmdrMisc relimp]; };
@@ -2974,7 +3040,7 @@ in with self; {
   RcmdrPlugin_KMggplot2 = derive2 { name="RcmdrPlugin.KMggplot2"; version="0.2-4"; sha256="0lmsd76q31bg2j8jd5p0891wi8cxibpjqx0196177w3y9kgcj3s1"; depends=[ggplot2 ggthemes plyr Rcmdr RColorBrewer scales survival tcltk2]; };
   RcmdrPlugin_MA = derive2 { name="RcmdrPlugin.MA"; version="0.0-2"; sha256="1zivlc0r2mkxpx23ba76njmb2wnnjijysvza4f24dg4l47d0sr2p"; depends=[MAd metafor Rcmdr]; };
   RcmdrPlugin_MPAStats = derive2 { name="RcmdrPlugin.MPAStats"; version="1.2.1"; sha256="0c3mcr8bmmbpxsqm8zfy07cbyglnq5466nafbglfs5m0z836yz9i"; depends=[ordinal Rcmdr]; };
-  RcmdrPlugin_NMBU = derive2 { name="RcmdrPlugin.NMBU"; version="1.8.7"; sha256="1pfv4ar3i9mkj6d4jv206dpwhbz5an1yd4g758pxsanliy5mi6cb"; depends=[MASS mixlm phia pls Rcmdr xtable]; };
+  RcmdrPlugin_NMBU = derive2 { name="RcmdrPlugin.NMBU"; version="1.8.8"; sha256="1s7947zvrhjrc7vchvaajp2q7xdqfg5vsmg6r7ym416cqq39i5kd"; depends=[MASS mixlm phia pls Rcmdr xtable]; };
   RcmdrPlugin_PcaRobust = derive2 { name="RcmdrPlugin.PcaRobust"; version="1.1.4"; sha256="17rq3sv8payazjjn5j37cgd6df5b62d2y8al3grw6hw5nfba7lvn"; depends=[Rcmdr robustbase rrcov tkrplot]; };
   RcmdrPlugin_RMTCJags = derive2 { name="RcmdrPlugin.RMTCJags"; version="1.0-2"; sha256="04g5a1dpch54k5ckfkrg4vsap1nc3af1i0i559qigv3hy8n7pm80"; depends=[coda igraph Rcmdr rjags rmeta runjags]; };
   RcmdrPlugin_ROC = derive2 { name="RcmdrPlugin.ROC"; version="1.0-18"; sha256="0alwsvwry4k65ps00zvdqky9rh663bbfaw15lhwydbgcpqdkn2n6"; depends=[pROC Rcmdr ResourceSelection ROCR]; };
@@ -3003,31 +3069,32 @@ in with self; {
   RcmdrPlugin_temis = derive2 { name="RcmdrPlugin.temis"; version="0.7.9"; sha256="0nacpipaimb1348rhv1rma85gnd38wsg741pz7xpvn347wnnc0wz"; depends=[ca lattice latticeExtra NLP R2HTML Rcmdr RColorBrewer slam stringi tcltk2 tm zoo]; };
   Rcolombos = derive2 { name="Rcolombos"; version="2.0.2"; sha256="0l92icjqqm5fxafqwd09lnmv5x6kvjdg8cphlm37q86nslwr5rkk"; depends=[httr]; };
   Rcplex = derive2 { name="Rcplex"; version="0.3-3"; sha256="0abmrqphrpdlc831hwbwx15z4vdgn385kxhnqlbb9v0sjmfyszsl"; depends=[slam]; };
-  Rcpp = derive2 { name="Rcpp"; version="0.12.14"; sha256="0qvyxggddyg87lza45hjl0a2prabdyshkqzkz418vi777zygqa6s"; depends=[]; };
+  Rcpp = derive2 { name="Rcpp"; version="0.12.15"; sha256="1pnv6sl4vdn69ygmgrb1b3gsigfdcfb56wnzikic93l8gkvdsvxv"; depends=[]; };
   Rcpp11 = derive2 { name="Rcpp11"; version="3.1.2.0"; sha256="1x6n1z7kizagr5ymvbwqb7nyn3lca4d4m0ks33zhcn9gay6g0fac"; depends=[]; };
   RcppAPT = derive2 { name="RcppAPT"; version="0.0.4"; sha256="0xbaamv3bg08ymbmiq6kwh86p17y6qzgydq02syig2a3ykp0042c"; depends=[Rcpp]; };
-  RcppAlgos = derive2 { name="RcppAlgos"; version="0.2.0"; sha256="0dp25csgmify0vd7dipcbp628cshy7i0bx77irc54qri1xq9icvv"; depends=[Rcpp]; };
+  RcppAlgos = derive2 { name="RcppAlgos"; version="0.2.5"; sha256="1fy8iwyd6z5q59v0c2xkw8nlccwpr0mn026p5iqii93d87pg8q1j"; depends=[Rcpp]; };
   RcppAnnoy = derive2 { name="RcppAnnoy"; version="0.0.10"; sha256="08s86ak26zybawry6l6l30k1lakc71k2j58539h70dnrmsd15jna"; depends=[Rcpp]; };
-  RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.8.100.1.0"; sha256="19sghlkslz6llcrjk5pd8c6dsb338jsi4dnwrbbrjkfq6jdr5jlp"; depends=[Rcpp]; };
+  RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.8.300.1.0"; sha256="0p6cbnwxgzigf7n5qhqvxdr3nd3pq3c2qq6pskqz7avzf813fy83"; depends=[Rcpp]; };
   RcppBDT = derive2 { name="RcppBDT"; version="0.2.3"; sha256="0gnj4gz754l80df7w3d5qn7a57z9kq494n00wp6f7vr8aqgq8wi1"; depends=[BH Rcpp]; };
   RcppBlaze = derive2 { name="RcppBlaze"; version="0.2.2"; sha256="0hi7gh7xlmdcyzxsis8wl841d6czbcgb8qdg8y822am1mvc0wmb7"; depends=[BH Matrix Rcpp]; };
   RcppCCTZ = derive2 { name="RcppCCTZ"; version="0.2.3"; sha256="0cb04filbr0mymcg891lc0dw2b3fnjmhn8z50xcilb3v72ccrvqg"; depends=[Rcpp]; };
-  RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.7"; sha256="10i9gjkq7grr7s24x62nji87zikabjx0pfrrp6jvm6nbmaxcb8yj"; depends=[Rcpp]; };
+  RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.8"; sha256="0fwz942pd1r7jcxwqjbagcai153kv7csflhg7agwhxyj49m97i82"; depends=[Rcpp]; };
   RcppClassic = derive2 { name="RcppClassic"; version="0.9.9"; sha256="102gi1l6hxdkz50iy9xbpb57iy5j7flv78sdq36pn9zi8x4k8k95"; depends=[Rcpp]; };
   RcppClassicExamples = derive2 { name="RcppClassicExamples"; version="0.1.1"; sha256="0shs12y3gj5p7gharjik48dqk0fy4k2jx7h22ppvgbs8z85qjrb8"; depends=[Rcpp RcppClassic]; };
   RcppDE = derive2 { name="RcppDE"; version="0.1.5"; sha256="1zgz8h7d7jjml9hm164y9wrsgcb1fymp3ipxp235fmk44lbrwpcw"; depends=[Rcpp RcppArmadillo]; };
   RcppDL = derive2 { name="RcppDL"; version="0.0.5"; sha256="1gii00bna6k9byaax7gsx42dv1jjnkrp4clbmdq59ybq3vkvw8z2"; depends=[Rcpp]; };
-  RcppEigen = derive2 { name="RcppEigen"; version="0.3.3.3.1"; sha256="093g2wmqyk86693l0lzh2va8119w3k7rvw5q24p842jdfv5x5z8l"; depends=[Matrix Rcpp]; };
+  RcppEigen = derive2 { name="RcppEigen"; version="0.3.3.4.0"; sha256="1m6ssq6lvi36ggf26y4hhq996583pxxdb978jnn1x6r9gdb0q0hi"; depends=[Matrix Rcpp]; };
   RcppExamples = derive2 { name="RcppExamples"; version="0.1.8"; sha256="15iw2vx6ygb03siq743418whhqvfrxk2i4nqn7p9yg1m3jwafxna"; depends=[Rcpp]; };
   RcppFaddeeva = derive2 { name="RcppFaddeeva"; version="0.1.0"; sha256="1rah18sdfmbcxy83i7vc9scrwyr34kn9xljkv9pa31js68gn2jrl"; depends=[knitr Rcpp]; };
   RcppGSL = derive2 { name="RcppGSL"; version="0.3.3"; sha256="0ih6lcby6rx0pkzwnd4bxq40cxa3cw9nfrphhhm9q71ng5vj1vrr"; depends=[Rcpp]; };
   RcppGetconf = derive2 { name="RcppGetconf"; version="0.0.2"; sha256="0z5sg2jlr465196ws2pqi7j7hfmd7j8xlqqj6841m635cg4q48ba"; depends=[Rcpp]; };
+  RcppGreedySetCover = derive2 { name="RcppGreedySetCover"; version="0.1.0"; sha256="1v84i9gsmvpkmgd4niqnzp58nhrgn2j4rggsrnlh391ikdfrl51x"; depends=[BH data_table Rcpp]; };
   RcppHMM = derive2 { name="RcppHMM"; version="1.2.2"; sha256="0scdzmns1yw2gbarblzd6cbvndlysz54ff17qijiz17ql5cyzly6"; depends=[Rcpp RcppArmadillo]; };
   RcppHoney = derive2 { name="RcppHoney"; version="0.1.7"; sha256="1jnng6271i2a564y115mr2bq324xffcjpq0ysy8yar2cgljxgspr"; depends=[Rcpp]; };
   RcppMLPACK = derive2 { name="RcppMLPACK"; version="1.0.10-6"; sha256="0vjx6azp3sny6nv5k1cs6vk61hmbllqw8mgvi7zn15p7ilmhsyyi"; depends=[BH Rcpp RcppArmadillo]; };
-  RcppMsgPack = derive2 { name="RcppMsgPack"; version="0.2.0"; sha256="1q5r4sj3rqs5xdxsmpzcxzs3jyx36siawz6j4ghc37mjb04rrdrl"; depends=[BH Rcpp]; };
-  RcppNumerical = derive2 { name="RcppNumerical"; version="0.3-1"; sha256="1b88iz0f13w148jrmd3qdkagycs7w3yr82y4zgn123kp17y7vvny"; depends=[Rcpp RcppEigen]; };
-  RcppParallel = derive2 { name="RcppParallel"; version="4.3.20"; sha256="1hc325hj214s61694iy4j3ly5zkya25h92hki29n3562qiirpb0g"; depends=[BH]; };
+  RcppMsgPack = derive2 { name="RcppMsgPack"; version="0.2.1"; sha256="0pd5jgv24yskxzp76c3i6lkpq9npdgw1i15dcf02v9h43q8n1s9s"; depends=[BH Rcpp]; };
+  RcppNumerical = derive2 { name="RcppNumerical"; version="0.3-2"; sha256="0j0hvwsbidahk2zx3zk7fhc6m9cca27iq3ivx7vdvggz8iqzszrz"; depends=[Rcpp RcppEigen]; };
+  RcppParallel = derive2 { name="RcppParallel"; version="4.3.20.2"; sha256="0g1fpdaaihxklc0pycbl3rsb94y79nm9pcc0xsvvqrq6ahi2433i"; depends=[BH]; };
   RcppProgress = derive2 { name="RcppProgress"; version="0.4"; sha256="09ayw6d69i0lplmaj5md25p5hn1nmiyp6a4sh60v93nrrs1cq7iv"; depends=[devtools Rcpp]; };
   RcppQuantuccia = derive2 { name="RcppQuantuccia"; version="0.0.2"; sha256="1si5njb8g4g6fjrkqbp3y6z23yxs901nq9kmiwwbqs8di6svc5q3"; depends=[BH Rcpp]; };
   RcppRedis = derive2 { name="RcppRedis"; version="0.1.8"; sha256="05c4c65ayiqyzmkj2mrgwwflgjk54rf9nmb3rhickj16yy9b071q"; depends=[BH RApiSerialize Rcpp]; };
@@ -3037,20 +3104,19 @@ in with self; {
   RcppStreams = derive2 { name="RcppStreams"; version="0.1.1"; sha256="0sa0ndnfm89f8lh3ba6jf3gxaan1g97dhlzbmpkwqj22frgggqjw"; depends=[BH Rcpp]; };
   RcppTN = derive2 { name="RcppTN"; version="0.2-2"; sha256="0m2wc5n1fzxv56s4gqqnygb24dbadgrpgjm4bs4hr6qazgjapymf"; depends=[Rcpp]; };
   RcppTOML = derive2 { name="RcppTOML"; version="0.1.3"; sha256="0krw4104m8drgyf53aq22kl5q0abrd0y4j1fvrwsj1dkbkybas05"; depends=[Rcpp]; };
-  RcppThread = derive2 { name="RcppThread"; version="0.1.2"; sha256="0n3g7mpwz0nx05yxm8f2g1j1zxp265k8svhli83q19d744ksjl75"; depends=[Rcpp]; };
+  RcppThread = derive2 { name="RcppThread"; version="0.1.3"; sha256="1nnyamjap1kgganvgwj48nip8nd7h35hzj7yvd131jnpq31gvvjg"; depends=[Rcpp]; };
   RcppXPtrUtils = derive2 { name="RcppXPtrUtils"; version="0.1.0"; sha256="0833j7hy7dpdxkj1m5cfyxzpp7j0n7mxjc5kx32mdn5s43iaf7yh"; depends=[Rcpp]; };
   RcppXts = derive2 { name="RcppXts"; version="0.0.4"; sha256="143rhz97qh8sbr6p2fqzxz4cgigwprbqrizxpkjxyhq8347g8p4i"; depends=[Rcpp xts]; };
   RcppZiggurat = derive2 { name="RcppZiggurat"; version="0.1.4"; sha256="16wdsm0zzn6q0h29a1w8yjn4zxvrirsws6h31k0ljgprsn3jjhz4"; depends=[Rcpp RcppGSL]; };
   Rcrawler = derive2 { name="Rcrawler"; version="0.1.7-0"; sha256="0r8s3d4dby9vn0qc5lbhab4vh3yl5yifi7ipxafsgffdxislnsdw"; depends=[data_table doParallel foreach httr selectr xml2]; };
-  Rcriticor = derive2 { name="Rcriticor"; version="1.1"; sha256="0imhzf55w3fvfhrpjppkaxndb56bmpqnkibkq9li9g9i7zda2q8w"; depends=[]; };
   Rcsdp = derive2 { name="Rcsdp"; version="0.1.55"; sha256="1sskjf2vv5alnwirz676d8yphzk2a69wkghhkpxb8my1rjlfdgaw"; depends=[]; };
   Rcssplot = derive2 { name="Rcssplot"; version="0.2.0.0"; sha256="0pv1yzpsc68bahfxh5h79xmh798a22nk6i88gj1s81sp7l5fbqlm"; depends=[]; };
   Rd2md = derive2 { name="Rd2md"; version="0.0.2"; sha256="07j1nnsk5nyl8kvgvh9f684g6bhc01jiq1fcmq2pnpx57jdzfbpi"; depends=[knitr]; };
   Rd2roxygen = derive2 { name="Rd2roxygen"; version="1.6.2"; sha256="1hkqy97mh68yzkh4bawjrgf1rlhkh3jz2ky84rg3wgz1mkvrrsx2"; depends=[formatR roxygen2]; };
   Rdice = derive2 { name="Rdice"; version="1.0.0"; sha256="1xibvm690808p2g3jch7rh1825yrpgln2hjfclgxjwn822qvs4xr"; depends=[data_table]; };
-  Rdimtools = derive2 { name="Rdimtools"; version="0.1.3"; sha256="0cy5slrnj4mckirfl259xxfp2ndzzl4w3myzckjz5mmylmflvqyb"; depends=[Rcpp RcppArmadillo Rcsdp Rdpack Rlinsolve RSpectra Rtsne]; };
+  Rdimtools = derive2 { name="Rdimtools"; version="0.3.1"; sha256="1rqb6by2h3w07k9hvsk18xwkmw7d58gj58r4lk99yk0n91ix6l0p"; depends=[ADMM CVXR Matrix Rcpp RcppArmadillo Rcsdp Rdpack RSpectra Rtsne]; };
   Rdistance = derive2 { name="Rdistance"; version="1.3.2"; sha256="1ajmr58lgc74727jiydfrh4j6ra7vq8hp8nm3l2s3g2mc8n1mqk5"; depends=[]; };
-  Rdpack = derive2 { name="Rdpack"; version="0.4-22"; sha256="1snj6aam942m7chp3qnl0yyvc9spzxwn3fjlzg74pk02hxki5drj"; depends=[bibtex gbRd]; };
+  Rdpack = derive2 { name="Rdpack"; version="0.5-5"; sha256="19rib96758r2zkq4wlys0gfj60zff34gv1wpb8d7pa34h81gpi9p"; depends=[bibtex gbRd]; };
   Rdrools = derive2 { name="Rdrools"; version="1.0.2"; sha256="1xn46lp6kgj6bns5nwjx4s8a3iif1g38iwf58hsrbqjhyygqvdzv"; depends=[Rdroolsjars rJava]; };
   Rdroolsjars = derive2 { name="Rdroolsjars"; version="1.0.1"; sha256="1l9bc1bwpj10irr973hzkhr04i1f3g998n8hcl2k2i9kgv1naqmz"; depends=[rJava]; };
   Rdsdp = derive2 { name="Rdsdp"; version="1.0.4-2"; sha256="05bk6yqvhzvyfzga1dz34w68nlwl2dc8bvhh3ghd07a61fsnkg4x"; depends=[]; };
@@ -3058,7 +3124,7 @@ in with self; {
   Rdtq = derive2 { name="Rdtq"; version="0.1"; sha256="114pyf95nl132014ygn84xi41c2zf1ii2wfgd1acwnnmfzvdw24s"; depends=[Matrix Rcpp]; };
   Rduino = derive2 { name="Rduino"; version="0.1"; sha256="0r1yy3a2n8a4niasfjn77gv130a062i802r7xhbg0abljv5m6ra5"; depends=[serial]; };
   ReCiPa = derive2 { name="ReCiPa"; version="3.0"; sha256="019vlvgxnqqlwghxygfqggzp2b4x2pqzdrbhaa703zdhm58k0n1g"; depends=[]; };
-  ReIns = derive2 { name="ReIns"; version="1.0.5"; sha256="1p6m3xkkhh2jj8h2lphwirk9zzbjv4gvag2bpypan8c6cic8rd9a"; depends=[doParallel foreach Rcpp survival]; };
+  ReIns = derive2 { name="ReIns"; version="1.0.6"; sha256="1q2f3ggg534dlgrmb4bsv8ikph11qg29asw1fpkndd9a96kc8gbk"; depends=[doParallel foreach Rcpp survival]; };
   ReacTran = derive2 { name="ReacTran"; version="1.4.3.1"; sha256="05c9jfvj134gy3by7m3r1fbar0m39vaydr7d2py9cakzs44fqfpj"; depends=[deSolve rootSolve shape]; };
   RealVAMS = derive2 { name="RealVAMS"; version="0.4-0"; sha256="1byh7in3bpfgdwfxp15334h167bvrcfj0cdswqy3yd81l9g2ickn"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; };
   Rearrangement = derive2 { name="Rearrangement"; version="2.1"; sha256="0q253nj62rl65vjsq6503r80qa2j35wac8lv7ydp9w260p28z923"; depends=[quantreg]; };
@@ -3079,13 +3145,13 @@ in with self; {
   RelimpPCR = derive2 { name="RelimpPCR"; version="0.2.3"; sha256="0qxngmkfb7sqjcyydk1z0rc857sfikf10iamxbv2d207spaha5l0"; depends=[caret ggplot2 relaimpo reshape2 Rmisc]; };
   Renext = derive2 { name="Renext"; version="3.1-0"; sha256="074djs4y71667aylpgh514pzijr90rgpzm4w5ayq9cgaqz22m3am"; depends=[evd numDeriv]; };
   RenextGUI = derive2 { name="RenextGUI"; version="1.4-0"; sha256="0jfg4a85j06wxk8vq2q6j8md2kcss0s7k71218gfh9vybk7hl4h6"; depends=[gWidgets gWidgetstcltk R2HTML Renext]; };
-  Reol = derive2 { name="Reol"; version="1.55"; sha256="0147x3fvafc47zd2chgv3b40k480pcjpji8vm1d741i1p6ml448p"; depends=[ape RCurl XML]; };
+  Renvlp = derive2 { name="Renvlp"; version="2.5"; sha256="0zsvjqbbakbr5bcgwpbjl8ns7hqgkk9v8g9b9yx2mjbv8vg40pz2"; depends=[Rsolnp]; };
   ReorderCluster = derive2 { name="ReorderCluster"; version="1.0"; sha256="0ss750frzvj0bm1w7zblmcsjpszhnbffwlkaw31sm003lbx9hy58"; depends=[gplots Rcpp]; };
   RepeatABEL = derive2 { name="RepeatABEL"; version="1.1"; sha256="00bq9ls4d0kczdv752xasqbavb11bjfvpriggfc8dw3g3i7pizpg"; depends=[GenABEL hglm]; };
   RepeatedHighDim = derive2 { name="RepeatedHighDim"; version="2.0.0"; sha256="1n9w4jb25pm0mmsahlfhkp9jmhgp5b21l1g85gm2wbxqkjsg7g0g"; depends=[MASS nlme]; };
   Replicate = derive2 { name="Replicate"; version="1.0.1"; sha256="110pvissyv3dx1wpwpngcg18mpmpml49gcmdykip55s1d3ljf791"; depends=[metafor]; };
-  ReporteRs = derive2 { name="ReporteRs"; version="0.8.8"; sha256="1pw3hy3g0nc6amga59sb1nnwqc9asdpn6lh2zfh87y8nazrf1hf0"; depends=[gdtools htmltools knitr png R_utils ReporteRsjars rJava rvg shiny xml2]; };
-  ReporteRsjars = derive2 { name="ReporteRsjars"; version="0.0.2"; sha256="1abvgzxipg0cgiy26z14i99qydzqva6j2v7pnrxapysg7ml5cnjc"; depends=[rJava]; };
+  ReporteRs = derive2 { name="ReporteRs"; version="0.8.9"; sha256="1wsqbn231xqs87dmcry13bdkvv09y17jfqkdnpigcsiivbh3zr3x"; depends=[gdtools htmltools knitr png R_utils ReporteRsjars rJava rvg shiny xml2]; };
+  ReporteRsjars = derive2 { name="ReporteRsjars"; version="0.0.3"; sha256="0rn000xkkda08kfh1b1l01piw596j3rca8sv4r23q52indrm7vzs"; depends=[rJava]; };
   ResistorArray = derive2 { name="ResistorArray"; version="1.0-28"; sha256="055zr4rybgrvg3wsgd9vhyjpvzdskrlss68r0g7rnj4yxkix0kxz"; depends=[]; };
   ResourceSelection = derive2 { name="ResourceSelection"; version="0.3-2"; sha256="08b1aa3183k1y30dwabnd6x353mdp2sn5b908cpv84bs3fdzlrdp"; depends=[MASS Matrix pbapply]; };
   RevEcoR = derive2 { name="RevEcoR"; version="0.99.3"; sha256="1nym263ynjdir5kxv35jnmki9mshlplq0sk3xnjd4ac6f1cfbfqj"; depends=[gtools igraph magrittr Matrix plyr purrr stringr XML]; };
@@ -3100,39 +3166,42 @@ in with self; {
   Rgnuplot = derive2 { name="Rgnuplot"; version="1.0.3"; sha256="0mwpq6ibfv014fgdfsh3wf8yy82nzva6cgb3zifn3k9lnr3h2fj7"; depends=[]; };
   RgoogleMaps = derive2 { name="RgoogleMaps"; version="1.4.1"; sha256="0fsmlnhl4kw2j4972kfanzw9njhnzk695gsyw8g6yppsmz2clcaq"; depends=[png]; };
   Rgretl = derive2 { name="Rgretl"; version="0.1.6"; sha256="0m835fh6am7b5bwfhisqmsi31cchlh4vy6n0kfac0lv657sz9rf7"; depends=[]; };
-  Rhpc = derive2 { name="Rhpc"; version="0.15-244"; sha256="1y83sshzsmsnm1m341x0ymmyz87dc5cjkbnr0v975p292rjqz3pd"; depends=[]; };
-  RhpcBLASctl = derive2 { name="RhpcBLASctl"; version="0.15-148"; sha256="1carylfz9gafradbdyg7fz2bypr7n72fbm8vhyiinmp0k4s5ipvc"; depends=[]; };
+  Rhpc = derive2 { name="Rhpc"; version="0.18-12"; sha256="095mrr6g05y9g8h88k1nf19zmjvg8hnmf5b3r6krqs4cxhp2qls2"; depends=[]; };
+  RhpcBLASctl = derive2 { name="RhpcBLASctl"; version="0.18-12"; sha256="14qypi76h73iv3xwbb860r4f7516jyb88j92lmkifw03x86lx2b3"; depends=[]; };
   RidgeFusion = derive2 { name="RidgeFusion"; version="1.0-3"; sha256="10llmrsfpcqrkcbw7zj44kvfy7ywn9rk49n7zplilz8h94zzcmjv"; depends=[mvtnorm]; };
   Ridit = derive2 { name="Ridit"; version="1.1"; sha256="02cni6hzf1bsns7vi8vklnhc0pfb5vwqhjnnfnjnnaxpzpsbvdfn"; depends=[]; };
-  Rilostat = derive2 { name="Rilostat"; version="0.2"; sha256="1ziy0g2piz4z37gnl0xdi486ig6p9b39v0qyiwcbdn03srizbj3a"; depends=[data_table dplyr DT haven plyr RCurl readr stringr tibble xml2]; };
+  Rilostat = derive2 { name="Rilostat"; version="0.2.1"; sha256="058qz5kn7p8wn3lvw92c11cqpkz9brgf1igmawfkb0lqvj366vyd"; depends=[data_table dplyr DT haven plyr RCurl readr stringr tibble xml2]; };
   Rip46 = derive2 { name="Rip46"; version="1.0.2"; sha256="0wfp6fm5mgmjqjkn0c5hvjd95yn4zcv0s8xc5294qf5jqxp8b1w7"; depends=[Rcpp]; };
   Risk = derive2 { name="Risk"; version="1.0"; sha256="1i42xcc699syj108mvgklwb30wkf9c9jrg5rmd2ypnqk9mnyg2fg"; depends=[]; };
   RiskPortfolios = derive2 { name="RiskPortfolios"; version="2.1.1"; sha256="1kn0vb4nhm3bxlmk5y2nl5m7a7hdvz3nz0yp8rdigpl6b2dp79w1"; depends=[MASS nloptr quadprog]; };
   Ritc = derive2 { name="Ritc"; version="1.0.2"; sha256="03smhxjhjfkc9pxhlgg54b6v2jznpmnws8373qpvn9a9ky5bcq2l"; depends=[minpack_lm]; };
+  RiverBuilder = derive2 { name="RiverBuilder"; version="0.1.0"; sha256="0qs21qz1zc0wsykd7qhry93il6qz255mgxyxnrdmxf5989k5mvxi"; depends=[]; };
   Rivivc = derive2 { name="Rivivc"; version="0.9"; sha256="0gl3040pp9nqm4g2ympnx80z64zfnn1hfsxka8ynd2cqhjn3b5i1"; depends=[signal]; };
   Rjpstatdb = derive2 { name="Rjpstatdb"; version="0.1"; sha256="0iwgsp3mblp7bsx88wfpqn09y1xrkingfkm3z9jsi2bwrnrjc2iv"; depends=[RCurl XML]; };
   RkMetrics = derive2 { name="RkMetrics"; version="1.3"; sha256="1k6vnr1r4h69iznib638z45gd0f8wc4g4h0ji9f0017883g77li1"; depends=[]; };
   Rknots = derive2 { name="Rknots"; version="1.3.2"; sha256="1krhma8hy3l5lbm6d8rxjlj9jw1zrd16h4wy4p1clfa5vlhh3bwi"; depends=[bio3d rgl rSymPy]; };
   Rlab = derive2 { name="Rlab"; version="2.15.1"; sha256="1pb0pj84i1s4ckdmcglqxa8brhjha4y4rfm9x0na15n7d9lzi9ag"; depends=[]; };
-  Rlabkey = derive2 { name="Rlabkey"; version="2.1.136"; sha256="1lgjskpdqp7ycym0wdr17law20z35hl36yajygk5cj3grchhlbpx"; depends=[Rcpp RCurl rjson]; };
-  Rlda = derive2 { name="Rlda"; version="0.2.2"; sha256="0wp2lgflpai3pqxkmbsadrdzlm27xafb129zzqm8nx70zwww611c"; depends=[coda doParallel foreach gtools Rcpp RcppArmadillo RcppProgress]; };
+  Rlabkey = derive2 { name="Rlabkey"; version="2.2.0"; sha256="1gzywhbdkd4f392fasa91ral8wg7jr51b4n1kll7r8hvyjz7bmgy"; depends=[httr Rcpp rjson]; };
+  Rlda = derive2 { name="Rlda"; version="0.2.3"; sha256="1p1a6zzxbzhsq74k5vc5w7gq1qpzxccbn2y3svdads0sgk037mmx"; depends=[coda doParallel foreach gtools Rcpp RcppArmadillo RcppProgress]; };
   Rlibeemd = derive2 { name="Rlibeemd"; version="1.4.0"; sha256="0nnkblrgycvfwn0lb9j92f5wpln69kk54z4irwi35rrfl31f689m"; depends=[Rcpp]; };
   Rlinkedin = derive2 { name="Rlinkedin"; version="0.2"; sha256="15sbiis1d0s466nqk1adjhflb01sb9kn25f4y6sagkdggvyz6b56"; depends=[httpuv httr XML]; };
-  Rlinsolve = derive2 { name="Rlinsolve"; version="0.1.1"; sha256="0xp2p3l0lbvz691hq3hjjrfvqyyar189xjbwyhk1snn4s9asqfx8"; depends=[BH bigmemory Matrix Rcpp RcppArmadillo]; };
+  Rlinsolve = derive2 { name="Rlinsolve"; version="0.2.0"; sha256="08ib0jjqicscn4mx5yv25q0x66iycx8jhazvjb47nqvn24mirprp"; depends=[BH bigmemory Matrix Rcpp RcppArmadillo Rdpack]; };
   Rlof = derive2 { name="Rlof"; version="1.1.1"; sha256="1px6ax2mr2agbhv41akccrjdrvp8a9lmhymp0cn8fjrib0ig8vql"; depends=[doParallel foreach]; };
   Rmalschains = derive2 { name="Rmalschains"; version="0.2-3"; sha256="1gh0f385s1nq12mk6a5l3nj1gd2mc6jzd66lisnxbcip25s4b8pb"; depends=[Rcpp]; };
-  RmarineHeatWaves = derive2 { name="RmarineHeatWaves"; version="0.15.7"; sha256="0dmmvvz7cpn378mji9hfmzr5xz99s3z0sd5anmidb6qzppkcxhks"; depends=[dplyr ggplot2 lazyeval lubridate magrittr plyr raster tidyr zoo]; };
-  RmecabKo = derive2 { name="RmecabKo"; version="0.1.6"; sha256="04sb7gxy3mrnd0cmfir34wvvs4h0x98hm0z7fa4jfg389zj0qj9h"; depends=[Rcpp]; };
+  RmarineHeatWaves = derive2 { name="RmarineHeatWaves"; version="0.16.0"; sha256="1h3850p1gdnr10x5gwqc45gk0vxbmq9j15prlm0m99xgcmk2pmxc"; depends=[dplyr ggplot2 lazyeval lubridate plyr raster tibble tidyr zoo]; };
+  RmecabKo = derive2 { name="RmecabKo"; version="0.1.6.2"; sha256="1i08wlfd14wmvwrsvjyhgzxkwzfp4jiwbzymw8m25pvyjxgi7jmy"; depends=[Rcpp stringr]; };
   Rmisc = derive2 { name="Rmisc"; version="1.5"; sha256="1ijjhfy3v91fspid77rrkc5dkcb2lav37wc3f4k5lwrn24wzy5y8"; depends=[lattice plyr]; };
   Rmixmod = derive2 { name="Rmixmod"; version="2.1.1"; sha256="1m5yab7wq343bzg8xszbrlif3cd4d1x7xcqh82czkxbfni1gz7j7"; depends=[Rcpp]; };
   RmixmodCombi = derive2 { name="RmixmodCombi"; version="1.0"; sha256="0cwcyclq143938wby0aj265xyib6gbca1br3x09ijliaj3pjgdqi"; depends=[Rcpp Rmixmod]; };
   Rmosek = derive2 { name="Rmosek"; version="1.2.5.1"; sha256="0zggv699s93i9g98qjs4ci2nprgfkzq45lpzgrbhldsxiflf27gz"; depends=[Matrix]; };
-  Rmpfr = derive2 { name="Rmpfr"; version="0.6-1"; sha256="073f01wga1ccxxgspsprjqdmb84iiap13mqhl7b6qcz9al89jl5z"; depends=[gmp]; };
+  Rmpfr = derive2 { name="Rmpfr"; version="0.7-0"; sha256="0jpj3nl76jd6vc2p1xwr8jl62q8ckwsdaxqnk9b20srkq63mfrig"; depends=[gmp]; };
   Rmpi = derive2 { name="Rmpi"; version="0.6-6"; sha256="184skad8m4y4pzk8v98b7k7prqxm9mg1b2pfxbknyvzakq6aizv1"; depends=[]; };
   RnavGraph = derive2 { name="RnavGraph"; version="0.1.8"; sha256="1fwzfy41gdr1aw1wg6dw04mxwwpp5s9x2inxyq3bc9s8bm1rlxih"; depends=[graph rgl scagnostics]; };
   RnavGraphImageData = derive2 { name="RnavGraphImageData"; version="0.0.3"; sha256="1mrh0p2ckczw4xr1kfmcf0ri2h2fhp7fmf8sn2h1capmm12i1q8f"; depends=[]; };
-  RndTexExams = derive2 { name="RndTexExams"; version="1.4"; sha256="18zmdfq234k4bjj5rz6zjlkiyndbj5v2irjfl3w66vz38lk8sf6v"; depends=[CopyDetect data_table stringi stringr]; };
-  Rnightlights = derive2 { name="Rnightlights"; version="0.1.4"; sha256="0a4pj24558q249x4x5lj89sbh4qyg60kpkvrx3ncgi7a521x3cfk"; depends=[cleangeo data_table doParallel dplyr foreach gdalUtils lubridate R_utils raster readr reshape2 rgdal rgeos rvest rworldmap settings sp stringr xml2]; };
+  RndTexExams = derive2 { name="RndTexExams"; version="1.4.1"; sha256="1gi96hfd7dkvmbvy6hj25g1l7nwk4yhxkdjx1l3ws3c2zpi27cvj"; depends=[CopyDetect data_table stringi stringr]; };
+  Rnets = derive2 { name="Rnets"; version="0.9.8"; sha256="0lcgapspl7ndrf3gxkrsv1172f2sv2587zaa1q6b950zympcvcj3"; depends=[data_table glasso igraph]; };
+  Rnightlights = derive2 { name="Rnightlights"; version="0.1.5"; sha256="162n1k8dxd8g5ymwj59v8fkiflqhl2ik9mk1g8rf46dk84h0zflb"; depends=[cleangeo data_table doSNOW dplyr ff ffbase foreach gdalUtils lubridate R_utils raster readr reshape2 rgdal rgeos rvest rworldmap settings snow sp stringr xml2]; };
+  Rnumerai = derive2 { name="Rnumerai"; version="0.2"; sha256="03qjrpi3hdbn8ni0ga57s3fsd2207mm34vl3p3n6y4vn15vg1k4n"; depends=[httr lubridate]; };
   RobAStBase = derive2 { name="RobAStBase"; version="1.0.1"; sha256="17vfi0ia3z3s6x7frjk1alcgb0h73gwxy2n11kfl0k8w2fxgk49l"; depends=[distr distrEx distrMod RandVar rrcov startupmsg]; };
   RobAStRDA = derive2 { name="RobAStRDA"; version="1.0.2"; sha256="1lyp2y38jnwv8ggrv9pdzprpf2gs62w1mpzwcqcbrmy7fzjsym0b"; depends=[]; };
   RobLox = derive2 { name="RobLox"; version="1.0"; sha256="0y193xai0mfwpm6zhxgy21h4yrlqrpvwx84bj4xnr8ql87wznh7q"; depends=[Biobase distr distrMod lattice RandVar RColorBrewer RobAStBase]; };
@@ -3142,7 +3211,7 @@ in with self; {
   RobRex = derive2 { name="RobRex"; version="0.9"; sha256="0ii539mjq462n1lbnyv3whl8b1agvhvlz31wwyz911gb40isl639"; depends=[ROptRegTS]; };
   Robocoap = derive2 { name="Robocoap"; version="0.1-1"; sha256="0aj6iv85a1zfaknjhrzf6lnf0qn726dvnj4dywg9nii1kkqrkq2w"; depends=[data_table igraph markovchain tm]; };
   RobustAFT = derive2 { name="RobustAFT"; version="1.4-1"; sha256="180gmlinrpnk4ghl1xickbjkdqr7vb6qzmy6701xpji5k8g9il60"; depends=[robustbase survival]; };
-  RobustGaSP = derive2 { name="RobustGaSP"; version="0.5.3"; sha256="1kzi5mvz78gxwrg1z822pkqzmqwvw73x2gh2yfsaxcwy2d7nr2mx"; depends=[Rcpp RcppEigen]; };
+  RobustGaSP = derive2 { name="RobustGaSP"; version="0.5.4"; sha256="1zq62vx5bq2wbdh9irmcfpbpr83qqr9m9icbpksxc8bp9zdsdzkq"; depends=[Rcpp RcppEigen]; };
   RobustRankAggreg = derive2 { name="RobustRankAggreg"; version="1.1"; sha256="1pslqyr1lji1zvcrwyax4zg2s81p1jnhfldz8mdfhsp5y7v8iar3"; depends=[]; };
   RockFab = derive2 { name="RockFab"; version="1.2"; sha256="1b5mhfll5vmqwl4pblmclyx9604vn07jyza02rm0jcsx915ms8sc"; depends=[EBImage rgl]; };
   Rodam = derive2 { name="Rodam"; version="0.1.2"; sha256="0fxsjzillr2v3sxbph13q3wrly6dx6m8rm276qzfvx1md044z14y"; depends=[RCurl]; };
@@ -3158,11 +3227,12 @@ in with self; {
   Rphylopars = derive2 { name="Rphylopars"; version="0.2.9"; sha256="19y0j5vh82sa9jigylxhv0s0hgjyhx3xq4blvk55jhpj8v7iyiky"; depends=[ape doBy geiger MASS Matrix mvnmle phylolm phytools Rcpp RcppArmadillo]; };
   Rpolyhedra = derive2 { name="Rpolyhedra"; version="0.1.0"; sha256="06i8pmvn7fl8likxzzqzkggqf7x20pwi10mcv4x46cacil80ir2z"; depends=[futile_logger R6 rgl stringr testthat]; };
   Rpoppler = derive2 { name="Rpoppler"; version="0.1-0"; sha256="19nvv45ahp0c241p1xzlq0sq5qarqg66jw5f1anhqnfi2hi91hcm"; depends=[]; };
+  Rprofet = derive2 { name="Rprofet"; version="1.1.0"; sha256="1aflqic2jfx9y6mxj155n0900xp20g1lliq8ad4nd4z2k0rfcpi2"; depends=[binr ClustOfVar ggplot2 gridExtra plyr sqldf]; };
   Rquake = derive2 { name="Rquake"; version="2.4-0"; sha256="14s2mjq9qqxfvlwmq9126h67y5wr7irlc7945pgv1ab9hl1lgmz8"; depends=[GEOmap MBA minpack_lm rgl RPMG RSEIS]; };
   Rramas = derive2 { name="Rramas"; version="0.1-5"; sha256="0wy0flzp68mikq4v9k5pv6hbzx0w9mpa74dwx79i3iiddn0ylby6"; depends=[diagram]; };
-  Rraven = derive2 { name="Rraven"; version="1.0.0"; sha256="1rca59bk94697m68j99kmrd6dl33k3yg1qqk1vqhjjvfp7m7jrlc"; depends=[pbapply vegan warbleR]; };
-  Rrdrand = derive2 { name="Rrdrand"; version="0.1-14"; sha256="18ry07pi9iwskbxcimvp91fgpvrlaf44z0hp7k90dnyaa8qpbwjx"; depends=[]; };
-  Rsampletrees = derive2 { name="Rsampletrees"; version="1.0.1"; sha256="1npv854iasvnrx51vgpda356dqwg7lgnx0d1lm174a0423cj3kmh"; depends=[ape haplo_stats Rcpp]; };
+  Rraven = derive2 { name="Rraven"; version="1.0.1"; sha256="14sq6zk6k8kgcr3blrpi3asqd0gjc17b8v5siaj8r25vj4q0qzfc"; depends=[dplyr kableExtra pbapply vegan warbleR]; };
+  Rrdrand = derive2 { name="Rrdrand"; version="0.1-15"; sha256="1i7snj33p44v43bz57x1887ing8h02xrf86rv7q0qijj198qf7dr"; depends=[]; };
+  Rsampletrees = derive2 { name="Rsampletrees"; version="1.0.2"; sha256="1wz3dp1myjkxzf9l5mfli3dfbkc2fwg70xx7m9cxa06vq0a4w5pv"; depends=[ape haplo_stats Rcpp]; };
   Rsampling = derive2 { name="Rsampling"; version="0.1.1"; sha256="14rp3j7iaii4rc3jkbijmbgvlagxxqjkz3vvfwwpxix43rsi8zsk"; depends=[]; };
   Rserve = derive2 { name="Rserve"; version="1.7-3"; sha256="09rha4p86vak7ss721mwp5bm5ig09xam8zlqv63n9wf36v3kdmpn"; depends=[]; };
   RsimMosaic = derive2 { name="RsimMosaic"; version="1.0.3"; sha256="0jlzrs9xxlpazvq3iw8znk0bd00bzlry7bgxsxq7xl23akizj0ji"; depends=[fields jpeg RANN]; };
@@ -3175,18 +3245,18 @@ in with self; {
   Rtextrankr = derive2 { name="Rtextrankr"; version="1.0.0"; sha256="16dby3xsfcjyp35xdflmgnh7zkqygfbffvj4jqa565vj9ksnq5ir"; depends=[igraph KoNLP sets stringi]; };
   Rtnmin = derive2 { name="Rtnmin"; version="2016-7.7"; sha256="0f8ii87v29v61b93hx2yxdppp3nvgnl5imp80sbb4bjsdg0mf989"; depends=[]; };
   Rtsne = derive2 { name="Rtsne"; version="0.13"; sha256="17crbdi80q4g2pwp9v7j3bdaznk96qlrqx01zvj3wwqippizyfqw"; depends=[Rcpp]; };
-  Rttf2pt1 = derive2 { name="Rttf2pt1"; version="1.3.4"; sha256="19wcjgcv871vzclgskvb7xywnzvvi9v5k0qhwxwwi3qc9yx2kpaq"; depends=[]; };
+  Rttf2pt1 = derive2 { name="Rttf2pt1"; version="1.3.5"; sha256="1pra2xa1gbg2yijlb9pjnkg3vxs5z35mfk110i7dblai9l59xwq6"; depends=[]; };
   Rtts = derive2 { name="Rtts"; version="0.3.3"; sha256="0jphdpnpbq0d48kzflilxlh6psk282hi1hz3rmnwnd0rx5iyg624"; depends=[RCurl]; };
-  RtutoR = derive2 { name="RtutoR"; version="0.3"; sha256="0knqwk44di24x8w2pf794hk2raq7gcpl6cd6s9m0sr73rxh9sf11"; depends=[dplyr DT ggplot2 ggthemes plotly rmarkdown shiny shinyBS shinydashboard shinyjs]; };
+  RtutoR = derive2 { name="RtutoR"; version="1.1"; sha256="132vyqkzjzwms9sbw6dmkqqk45si89r0xvy477xl98k14a2q4jlw"; depends=[colourpicker devtools dplyr DT FSelector ggplot2 ggthemes plotly ReporteRs rlang rmarkdown shiny shinyBS shinydashboard shinyjs tidyr]; };
   Rtwalk = derive2 { name="Rtwalk"; version="1.8.0"; sha256="0zxf66lsfq8by40flv34xzd5yy0wa1ah9li1d0h7f0yh9nbwhxl5"; depends=[]; };
   Ruchardet = derive2 { name="Ruchardet"; version="0.0-3"; sha256="0dgldi6fgp949c3455m9b4q6crqv530jph210xzph41vgw8a2q2v"; depends=[Rcpp]; };
   Runiversal = derive2 { name="Runiversal"; version="1.0.2"; sha256="0667mspsjydmxi848c6wsf14gz72bmdj9b3lilma92b7fhqnv7ai"; depends=[]; };
   Runuran = derive2 { name="Runuran"; version="0.24"; sha256="1528jzpg0m4gya63xjf7ya4x1c96anm6bpzjgsa1vq1a4dz9m4y9"; depends=[]; };
-  RunuranGUI = derive2 { name="RunuranGUI"; version="0.1"; sha256="0wm91mzgd01qjinj94fr53m0gkxjvx7yjhmwbkrxsjn6mjklq72l"; depends=[cairoDevice gWidgets gWidgetsRGtk2 Runuran rvgtest]; };
+  RunuranGUI = derive2 { name="RunuranGUI"; version="0.2"; sha256="0k3vgn027c2zbrk7pc2wcy2h6dn2djhdi70m8fi1qpz6vg7k8c7x"; depends=[cairoDevice gWidgets gWidgetsRGtk2 RGtk2 Runuran rvgtest]; };
   Rvcg = derive2 { name="Rvcg"; version="0.17"; sha256="0ssmi8mqmq82qrw0hzrmfqpwnkxwdlfa6j049r4l3gn28cfqhg1j"; depends=[Rcpp RcppArmadillo RcppEigen]; };
   Rvmmin = derive2 { name="Rvmmin"; version="2017-7.18"; sha256="14jzwqwi1zd8sg1vb18hgvbvsax38hdqjy540qqhn2xb4z8qx3hy"; depends=[optextras]; };
   Rvoterdistance = derive2 { name="Rvoterdistance"; version="1.1"; sha256="16il36hkq1j6gyl5d8bx5khiiv6fy2m8vkhwiaaiqsliw2sspy4j"; depends=[Rcpp]; };
-  Rwave = derive2 { name="Rwave"; version="2.4-5"; sha256="1q80759382yig5gmjd83qafavhbbh7bbbgil8qha91xfs27m45br"; depends=[]; };
+  Rwave = derive2 { name="Rwave"; version="2.4-8"; sha256="1rmqwyj2r84sii0vfqhyhpi3n1n1zia2ca627fq9ksvwn110nrvh"; depends=[]; };
   Rwinsteps = derive2 { name="Rwinsteps"; version="1.0-1"; sha256="0kzngkan9vydibnr3xm4pyz4v6kz0r4h19f0ngqpri07fkhdsxzd"; depends=[]; };
   RxCEcolInf = derive2 { name="RxCEcolInf"; version="0.1-3"; sha256="04d6ffl4qs2vjbk0ibvyq17i2l26qnvxr72s6p3f8q4px33rh4kh"; depends=[lattice MASS MCMCpack mvtnorm]; };
   RxODE = derive2 { name="RxODE"; version="0.6-1"; sha256="1dkz6kq9wq7q2xw2wdzii5682w9f7rmgq28g7pfh8ivimfg1q4bi"; depends=[brew digest dparser inline magrittr Matrix memoise R_utils Rcpp RcppArmadillo rex]; };
@@ -3208,12 +3278,13 @@ in with self; {
   SAMUR = derive2 { name="SAMUR"; version="0.6"; sha256="0iyv7ljjrgakgdmpylcxk3m3xbm2xwc6lbjvl7sk1pmxvpx3hhhc"; depends=[Matching]; };
   SAMURAI = derive2 { name="SAMURAI"; version="1.2.1"; sha256="02fipbjcsbp2b2957x6183z20icv1yly2pd1747nyww9bmpa7ycm"; depends=[metafor]; };
   SAPP = derive2 { name="SAPP"; version="1.0.7"; sha256="0rms9kq87dypdfs248m4393lgpfx37qah0n1s109pfnjh3k64pm3"; depends=[]; };
+  SARP_compo = derive2 { name="SARP.compo"; version="0.0.3"; sha256="1fn2rrd89qhz3vnz58xmmdjda70k474iyh4v1cmjfdam74fax7kh"; depends=[car igraph]; };
   SARP_moodle = derive2 { name="SARP.moodle"; version="0.3.8"; sha256="1hz5a2zjv8hrasjck981sqahq0l88b6ard1iwsfqznalva8zywbb"; depends=[]; };
   SASPECT = derive2 { name="SASPECT"; version="0.1-1"; sha256="1d3yqxg76h9y485pl5mvlx6ls1076f80b320yvx4zxmqq9yxmaba"; depends=[]; };
   SAScii = derive2 { name="SAScii"; version="1.0"; sha256="0nq859xmrvpbifk8q1kbx3svg61rqdg8p8gr1pn85fr0j3w7h666"; depends=[]; };
-  SASmarkdown = derive2 { name="SASmarkdown"; version="0.3.3"; sha256="0wwqy9gr35isaqzgg48d2gaayaz40n8mjymlj28brbsbrfhddpbw"; depends=[knitr]; };
+  SASmarkdown = derive2 { name="SASmarkdown"; version="0.4.3"; sha256="0jc21ylflvv4snik13731acxh9zw79s7hpswk58p2wzvavq8k9zn"; depends=[knitr]; };
   SASmixed = derive2 { name="SASmixed"; version="1.0-4"; sha256="0491x4a3fwiy26whclrc19alcdxccn40ghpsgwjkn9sxi8vj5wvm"; depends=[]; };
-  SASxport = derive2 { name="SASxport"; version="1.5.3"; sha256="0hkwz4szl4rzl6arkn6kp8s7nk55g902hpslgzbkaz94wlrzp77z"; depends=[chron Hmisc]; };
+  SASxport = derive2 { name="SASxport"; version="1.5.7"; sha256="1y3hh77c69s65wnar3x40wj3msqjpvspdyy368hgfg8ljkdl3pk2"; depends=[Hmisc stringi]; };
   SAVE = derive2 { name="SAVE"; version="1.0"; sha256="1m9rrga8x00hlvn0c1jcz6yz14pdm6h3dq14905mq49sw63c7zll"; depends=[coda DiceKriging]; };
   SBRect = derive2 { name="SBRect"; version="0.26"; sha256="16g0ciy9q9irypsl8x36i0lavl41j3af13r2si0by8q6wj56pxi4"; depends=[rJava]; };
   SBSA = derive2 { name="SBSA"; version="0.2.3"; sha256="1v23lzzziyjlvgn5p2n1qcq2zv9hsyz2w15lbnfi5wvinxhlg8sc"; depends=[Rcpp RcppArmadillo]; };
@@ -3233,8 +3304,10 @@ in with self; {
   SDD = derive2 { name="SDD"; version="1.2"; sha256="0wzgm1hgjv5s00bpd7j387qbvn5zvyrrd5fr2rgyll4cw9p4sd33"; depends=[Hmisc rgl rpanel sm tseries]; };
   SDDE = derive2 { name="SDDE"; version="1.0.1"; sha256="14vql1bypn409w9xcx1jdzff6apiagcz2wng3y24h3mk7yjv9bzy"; depends=[doParallel foreach igraph iterators]; };
   SDEFSR = derive2 { name="SDEFSR"; version="0.7.1.0"; sha256="1pknkda7iaq5247557b93kc3cf2ih7b3wpqpkqyfgfay3ci9kg16"; depends=[]; };
+  SDLfilter = derive2 { name="SDLfilter"; version="1.0.0"; sha256="0g6cwpz1mzmcq16h34255sanqqwyb0a8dn6h043ksvnc91h2haa0"; depends=[data_table geosphere raster sp trip]; };
   SDMPlay = derive2 { name="SDMPlay"; version="1.2"; sha256="0kafj5z1fi5d824h0n23qzn8a6n8fqm3bfc0pdfypzbaj2arjz3k"; depends=[dismo gbm raster SDMTools]; };
   SDMTools = derive2 { name="SDMTools"; version="1.1-221"; sha256="1kacrpamshv7wz83yn45sfbw4m9c44xrrngzcklnwx8gcxx2knm6"; depends=[R_utils]; };
+  SDT = derive2 { name="SDT"; version="1.0.0"; sha256="1jwpfd1pnzy9wcl90qv5bgwi19shsw9064dvml9zwbif8yw8dzjj"; depends=[quadprog]; };
   SDaA = derive2 { name="SDaA"; version="0.1-3"; sha256="0z10ba4s9r850fjhnrirj2jgnfj931vwzi3kw9502r5k7941lsx0"; depends=[]; };
   SDraw = derive2 { name="SDraw"; version="2.1.3"; sha256="179h5byh92dkycchalf875pwq1h4ryg3hba9fs7fbq4dshki5i7p"; depends=[deldir rgeos sp spsurvey]; };
   SEAsic = derive2 { name="SEAsic"; version="0.1"; sha256="1mg01sag6n1qldjvmvbasac86s7sbhi4k99kdkav2hdh6n9jg467"; depends=[]; };
@@ -3263,7 +3336,8 @@ in with self; {
   SILGGM = derive2 { name="SILGGM"; version="1.0.0"; sha256="1lhmisgg2zbfksl7czz0fqag3732gkjc44n615ipxbdi2pvnc7m0"; depends=[glasso MASS Rcpp reshape]; };
   SIMMS = derive2 { name="SIMMS"; version="1.1.1"; sha256="1wgqz8zgijv5psz5r5zj9k63ikq5sr1dxqxvh48n2041slj6jdap"; depends=[doParallel foreach glmnet MASS survival xtable]; };
   SIN = derive2 { name="SIN"; version="0.6"; sha256="0vq80m3vl8spdnlkwvwy0gk3ziyybqzjp3scnfdcpn942ds7sgg9"; depends=[]; };
-  SIS = derive2 { name="SIS"; version="0.8-4"; sha256="1bhpj0l28804f48nc68xg0cfbpzplr2n32ccfs4w9g2m7lgarg07"; depends=[glmnet ncvreg survival]; };
+  SIRItoGTFS = derive2 { name="SIRItoGTFS"; version="0.2.2"; sha256="1vjpnhpf8b3fwxgmmp7nljmk8js7sn2sn9ajlsgpmnww1bq4sh5f"; depends=[data_table dplyr easycsv reshape2 rgdal rgeos sp]; };
+  SIS = derive2 { name="SIS"; version="0.8-6"; sha256="1749ks5iqlj6lrn0hglifj1iy86dcpqz2pcnf1l798pa05rq8ngd"; depends=[glmnet ncvreg survival]; };
   SISIR = derive2 { name="SISIR"; version="0.1"; sha256="08lw9y38j5qq00m2vcxsac97lg14j4w1y6607vw8isrb3qb5db9z"; depends=[doParallel expm foreach glmnet Matrix RSpectra]; };
   SKAT = derive2 { name="SKAT"; version="1.3.2.1"; sha256="0ylfz63xiq2zw9nc8nqr89qbhl3fnkhjgg9x7yxjm78vrn640hkl"; depends=[]; };
   SLC = derive2 { name="SLC"; version="0.3"; sha256="0l0y1sjj0glsb7vwla99ijclcgaq2y85bgz1wqm348n4shsmm2rs"; depends=[]; };
@@ -3278,7 +3352,7 @@ in with self; {
   SMIR = derive2 { name="SMIR"; version="0.02"; sha256="02q8m5m8lcfrpi78p3kajkps8wiir3jwyqc54j9vfx8aj6mk1v71"; depends=[]; };
   SMLoutliers = derive2 { name="SMLoutliers"; version="0.1"; sha256="10frs7wcyn368m7fvw2f1cyd0xqr6sv5jziixnyvr8q5fadyl2p0"; depends=[]; };
   SMM = derive2 { name="SMM"; version="1.0.1"; sha256="0g2blwcir0sxvqrivcyn9a8ssx34834lgcwrjwb6kcrq224dchws"; depends=[DiscreteWeibull seqinr]; };
-  SMMA = derive2 { name="SMMA"; version="1.0.1"; sha256="0ld8jjh67iw5w5cmb2gb899269apjydgqjsnn5hq5lzqjilpzzl8"; depends=[Rcpp RcppArmadillo]; };
+  SMMA = derive2 { name="SMMA"; version="1.0.2"; sha256="13psgrpljnaxpcq4amiyg5mqhpzmb2hyb7jzh3h8wyq18rvs3s4d"; depends=[Rcpp RcppArmadillo]; };
   SMNCensReg = derive2 { name="SMNCensReg"; version="3.0"; sha256="06542jacy74mw6ic0i1ml09pn45sll96bya7dqja6bg9yp0m6bvr"; depends=[Matrix PerformanceAnalytics]; };
   SMPracticals = derive2 { name="SMPracticals"; version="1.4-2"; sha256="0apmkmsv2fqmxpgq08n9k9dvcknj74s4cpp0myjcd6kibb7g9slq"; depends=[ellipse MASS nlme survival]; };
   SMR = derive2 { name="SMR"; version="2.0.1"; sha256="0qy56fmismcjklpf29ic2gi1g8ajdjpxsl0akb9cqzyisyf641ia"; depends=[]; };
@@ -3286,7 +3360,7 @@ in with self; {
   SNFtool = derive2 { name="SNFtool"; version="2.2.1"; sha256="0id8qvkvxvnlqn3wha45v457pr4061j35wcwlqwh03n0j549s84l"; depends=[heatmap_plus]; };
   SNPMClust = derive2 { name="SNPMClust"; version="1.3"; sha256="1gad1jfla4qpczh8vpwyss5cckzgpffsyj0d71r8drbspr4i3r90"; depends=[MASS mclust]; };
   SNPassoc = derive2 { name="SNPassoc"; version="1.9-2"; sha256="113byj8zbg6xyxb1qzm76sqfyk3fap0sd90691zzm1x2pbfnb3mh"; depends=[haplo_stats mvtnorm survival]; };
-  SNPknock = derive2 { name="SNPknock"; version="0.5"; sha256="1s3awnf6j8g7b689m4q1rl6jgpagdx29mymlybj6gp0h2xb16ylm"; depends=[Rcpp]; };
+  SNPknock = derive2 { name="SNPknock"; version="0.5.1"; sha256="0vp6nsa2ydfn6m7fwsgjwdzhvrwzjyv79n1fa5910lj1f0g5ijw2"; depends=[Rcpp]; };
   SNPmaxsel = derive2 { name="SNPmaxsel"; version="1.0-3"; sha256="0pjvixwqzjd3jwccc8yqq9c76afvbmfq0z1w0cwyj8bblrjpx13z"; depends=[combinat mvtnorm]; };
   SNPtools = derive2 { name="SNPtools"; version="1.1"; sha256="0l29kiqz4048x7amxx1qzkaw2xnd6lpdsdp5nq3rck9amx2hw64a"; depends=[Biostrings GenomicRanges IRanges Rsamtools]; };
   SNSequate = derive2 { name="SNSequate"; version="1.3.1"; sha256="1w6yai79996pgg98skfb63kha8rqjzn751nmxg961rc4id1g8ysn"; depends=[emdbook knitr magic plyr progress statmod]; };
@@ -3297,7 +3371,7 @@ in with self; {
   SOFIA = derive2 { name="SOFIA"; version="1.0"; sha256="1jlaggxa2nz2r5yb2xmf0dh5wmxfdk6xwn0l3nwsqh82vyxhp7l9"; depends=[png]; };
   SOIL = derive2 { name="SOIL"; version="1.1"; sha256="0dvfh84xjzald51kmdb546par2rbjdn3nys9y9w7cvafv2lc5yj9"; depends=[brglm2 glmnet MASS ncvreg]; };
   SOLOMON = derive2 { name="SOLOMON"; version="1.0-1"; sha256="0z91wsrgdir25ks4dnirzsg4f1ngal7n40235m3w43j6y6dhkqrc"; depends=[]; };
-  SOMbrero = derive2 { name="SOMbrero"; version="1.2-2"; sha256="1y1shgzsl922id3r7yrc5715zg5l6pxmim969h3ba32ry6mr0sr8"; depends=[igraph knitr RColorBrewer scatterplot3d shiny wordcloud]; };
+  SOMbrero = derive2 { name="SOMbrero"; version="1.2-3"; sha256="04vla01y3qagzpyr70mx9dgl0ihk9a9vh02896fr8kc9ch3sx6bd"; depends=[igraph RColorBrewer scatterplot3d shiny wordcloud]; };
   SOPIE = derive2 { name="SOPIE"; version="1.5"; sha256="0isvb2vzzpn57bq0ix2pfaqdnl5z8qk6v6fvf15vnxcqg2sm63q5"; depends=[ADGofTest circular]; };
   SOR = derive2 { name="SOR"; version="0.23.0"; sha256="0djmz57g23xpzv6p8i71f3zrsc6xdgqkbcvn5cbx9m78n31ipkm5"; depends=[Matrix]; };
   SOUP = derive2 { name="SOUP"; version="1.1"; sha256="0k8nlvl4681cz07xjazprcc0jhknfa5hgr7w1qxxmgrp3sprr8r4"; depends=[tensor]; };
@@ -3308,6 +3382,7 @@ in with self; {
   SPAr = derive2 { name="SPAr"; version="0.1"; sha256="068jlsvaxx80ih6n86286m2r75cvy6w0m51vpj4gfclhh38py4p4"; depends=[]; };
   SPAtest = derive2 { name="SPAtest"; version="2.0.2"; sha256="1h1qgjisd1kxw3644s5xmj212mnqkbfdzz9sa9wk4vb2dzv4660r"; depends=[]; };
   SPCALDA = derive2 { name="SPCALDA"; version="1.0"; sha256="1bmp2zz0favmpyp0ap8a2r1mg1nlan7zg5cj75drdnfpqlsn5vgl"; depends=[MASS]; };
+  SPCAvRP = derive2 { name="SPCAvRP"; version="0.2"; sha256="1kqx2mf75h491aj6rm923frpj1yl9c1p666cq3f1d7aa1k9byrzi"; depends=[MASS]; };
   SPECIES = derive2 { name="SPECIES"; version="1.0"; sha256="0p45llf2wjr467bqr4pbljfank9zz3fm42yl3i0r3jbkxgz0rjf0"; depends=[]; };
   SPEDInstabR = derive2 { name="SPEDInstabR"; version="1.5"; sha256="1m8als33k8db82pr9k8n4jk6i1dqimd9klw8xawwz7gzk1h31fsr"; depends=[]; };
   SPEI = derive2 { name="SPEI"; version="1.7"; sha256="0lj7d3bbik7q4di5nqc3a1rn94z2y2v9x45r1jjkvgf03frj96qd"; depends=[ggplot2 lmomco]; };
@@ -3315,27 +3390,28 @@ in with self; {
   SPIGA = derive2 { name="SPIGA"; version="1.0.0"; sha256="0yd06x5rh1h1s4v9apj43c90rkz8m5kssbny7y5mnw5mr2acds9b"; depends=[GA]; };
   SPIn = derive2 { name="SPIn"; version="1.1"; sha256="109xxrg7bsmmfd6ik85kxrw2qclxbh5ipsh5mmrdl4hki3hnyp2s"; depends=[quadprog]; };
   SPODT = derive2 { name="SPODT"; version="0.9-1"; sha256="01yq429a4s63855bwpn2mqjj2k3cz4187kfpi7n7qqdpdvmxz109"; depends=[rgdal sp tree]; };
-  SPOT = derive2 { name="SPOT"; version="2.0.1"; sha256="0zyh0pn0mc7n150851vdqx3ixjn53id3pm3a408365h0wafcrn3g"; depends=[MASS randomForest]; };
+  SPOT = derive2 { name="SPOT"; version="2.0.2"; sha256="17apfbsh4qv3yhv7jpmmyz7whwx4ilm0krspxyc4knm3yxxw26bp"; depends=[DEoptim MASS nloptr randomForest rgenoud rsm]; };
   SPPcomb = derive2 { name="SPPcomb"; version="0.1"; sha256="1kn3pi3c7g7waill1grm382ixbvnc7z8pbgzqd94hxqzgkivhid7"; depends=[nleqslv]; };
   SPREDA = derive2 { name="SPREDA"; version="1.0"; sha256="1dyqsra899fd1nbk1b7vkw8gs455c6pbcvzw84q9iri77186xqhv"; depends=[nlme survival]; };
   SPRT = derive2 { name="SPRT"; version="1.0"; sha256="1r4pfqh8k5avi8qgpk5x1cy8lmkn341yvjvd2r7wqwb3mr242r0v"; depends=[]; };
   SPSL = derive2 { name="SPSL"; version="0.1-8"; sha256="1jg1nfhz8qml1wwqa4d0w7vkdmbgdy5xlfqx0h2pdw2z8iij3xxc"; depends=[]; };
+  SPUTNIK = derive2 { name="SPUTNIK"; version="1.0.0"; sha256="0620nw9i1li52q0h5ygqs5zjl9ciblz3qdx31i3qwbz2c1gza9hy"; depends=[autothresholdr ggplot2 imager infotheo reshape SDMTools spatstat viridis viridisLite]; };
   SPYvsSPY = derive2 { name="SPYvsSPY"; version="0.1.1"; sha256="1hxc73wwrzqh1r1xr9yd4hy4ma24virg4iv978lfyc9f9n56znp5"; depends=[]; };
   SPmlficmcm = derive2 { name="SPmlficmcm"; version="1.4"; sha256="1acs3560a7h6xx286m40abr9b7i5qihn6wni8flj0biahmsszzx6"; depends=[nleqslv]; };
   SPreFuGED = derive2 { name="SPreFuGED"; version="1.0"; sha256="1cdamkrr0xpc0l2dypd9lgjidrmalfxs0ms7z3wfmf22a8b3y0d2"; depends=[Biobase boot CMA lattice limma lme4 mvtnorm]; };
   SQDA = derive2 { name="SQDA"; version="1.0"; sha256="0nfimk625wb64010r5r7hzr64jfwgc6rbn13wvrpn0jgayji87h6"; depends=[limma mvtnorm PDSCE]; };
   SQN = derive2 { name="SQN"; version="1.0.5"; sha256="0kb8kf6g482zqdp4avwvhs3pqghfny757dbzfl1abaigmvwvx4qj"; depends=[mclust nor1mix]; };
-  SQRL = derive2 { name="SQRL"; version="0.1.0"; sha256="0s3q4ryzps8by8bhz26c6sax26a0vgd7f099sf4qdjl44274dmv0"; depends=[RODBC]; };
+  SQRL = derive2 { name="SQRL"; version="0.1.1"; sha256="15sfw00ff2bil9y0y0dwzjqwqgh5h3266ny6clvgpsx4hsczzsmr"; depends=[RODBC]; };
   SQUAREM = derive2 { name="SQUAREM"; version="2017.10-1"; sha256="10xj26x7qjyvzndnbjl5krr9wabnb9cbrnp3m7xg673g8ddr12cv"; depends=[]; };
   SRCS = derive2 { name="SRCS"; version="1.1"; sha256="13zf3cqs53w68f9zc1fkb9ql84rvzn7g1hbykqrbvss8hjaq8x1r"; depends=[]; };
   SRRS = derive2 { name="SRRS"; version="0.1.1"; sha256="0jv545a97q4pyl89lmhn3y0jhdzyq033mvx144x8lcgx59s7cyi3"; depends=[gtools tcltk2]; };
   SSBtools = derive2 { name="SSBtools"; version="0.2.1"; sha256="1cqdmvh9gxyx2yciy0j54v84hl8cayifv368ip5y3k6g1cff6488"; depends=[]; };
-  SSDM = derive2 { name="SSDM"; version="0.2.3"; sha256="177lh4qf9b7gwi911mhy8ypfqlpl7yhl60pznhwcpynk9iqp2hzx"; depends=[dismo e1071 earth gbm gplots mgcv nnet randomForest raster rpart SDMTools shiny shinydashboard shinyFiles sp spThin]; };
+  SSDM = derive2 { name="SSDM"; version="0.2.4"; sha256="1zn0iaav58pjzd6ckm28w16pblkjxacj2s1daj0sk0423dhjkf76"; depends=[dismo e1071 earth gbm gplots mgcv nnet randomForest raster rpart SDMTools shiny shinydashboard shinyFiles sp spThin]; };
   SSDforR = derive2 { name="SSDforR"; version="1.4.17"; sha256="0c4w1fl199ksb63xxpawmld8bri9vcpbd2ypx5qrdfk4if5jhrrf"; depends=[MASS psych TSA TTR]; };
   SSL = derive2 { name="SSL"; version="0.1"; sha256="0fy6svf8xfni72bpsg8a5wr8ly46srhfixk8866lrcsp8pb6mqcd"; depends=[caret e1071 klaR NetPreProc proxy Rcpp xgboost]; };
   SSLASSO = derive2 { name="SSLASSO"; version="0.0-1"; sha256="045w4j9rqqmkp1am838isa9an30hlvc46w9fkpl0q6npk6fl9rws"; depends=[]; };
   SSM = derive2 { name="SSM"; version="1.0.1"; sha256="1h8yyzh5rn5jay70kyzvwirfndi049a5w28qigrjv5rxd7ml84l7"; depends=[]; };
-  SSN = derive2 { name="SSN"; version="1.1.10"; sha256="0fhwshl6vwf9cvbg8j284i27vayjrslk5hpyvrby390jma9klk4i"; depends=[BH igraph lattice maptools MASS Matrix rgdal rgeos RSQLite sp]; };
+  SSN = derive2 { name="SSN"; version="1.1.12"; sha256="1c2dx7d9izd4z76pvsbbfb0r1a6w45x96mv4vb9h99yafcw380nv"; depends=[BH igraph lattice maptools MASS Matrix rgdal rgeos RSQLite sp]; };
   SSRA = derive2 { name="SSRA"; version="0.1-0"; sha256="1d0lg2dz8vf1d63366s5apm0ygrsfxivbrsij907r244zj6i1c37"; depends=[shape stringr]; };
   SSRMST = derive2 { name="SSRMST"; version="0.1.1"; sha256="15s6vcmk8a27yw3rlfkajby6qkizp4sfiyi63m7hc86svd15x4wg"; depends=[survival survRM2]; };
   SSrat = derive2 { name="SSrat"; version="1.0"; sha256="1qpsdfdngsgxx3mqgn4avl65w4v5v4jwsh1nnxzfn9iqi9mg4bhi"; depends=[plyr sna]; };
@@ -3350,10 +3426,11 @@ in with self; {
   STMedianPolish = derive2 { name="STMedianPolish"; version="0.2"; sha256="0jzgcfhm09cccg2nwbvrmnkah1psbnmg26rc2n7lz26n4b20p3l2"; depends=[gstat maptools nabor reshape2 sp spacetime zoo]; };
   STPGA = derive2 { name="STPGA"; version="4.0"; sha256="198h2wzhv5lnyqypn7s5lilywby2pq3zdx8vk4qd72bybfwwli2c"; depends=[]; };
   SUE = derive2 { name="SUE"; version="1.0"; sha256="0akv724s84v2zixvwywj1ydfnfvcjnaabv6gm0601nsrh6ij1mi6"; depends=[]; };
+  SUMMER = derive2 { name="SUMMER"; version="0.1.0"; sha256="14dq64h931l8r4pfhdg3i8wabb08n1fnnp8ql1bmhl1z4dqbggfl"; depends=[classInt ggplot2 maptools RColorBrewer sp spdep survey survival]; };
   SVMMaj = derive2 { name="SVMMaj"; version="0.2-2"; sha256="01njc7drq01r3364081dv9gn37vrql52zbrb60gd559f3jshqx3m"; depends=[kernlab MASS]; };
   SVMMatch = derive2 { name="SVMMatch"; version="1.1"; sha256="1ykwrhlid4hs466xh3kv6y2qdhgk0jiglg0l3zwk5qlni6p26zc9"; depends=[Rcpp RcppArmadillo]; };
   SWATmodel = derive2 { name="SWATmodel"; version="0.5.9"; sha256="1i48g9nbjfn30ppwyzyz3k181nscv4wx773l8mzfdwhx0nlv4kyj"; depends=[EcoHydRology]; };
-  SWMPr = derive2 { name="SWMPr"; version="2.2.0"; sha256="1nq3wc06c7fga9v69fwk3dr348lb127wd9ikb59lgnx2w86g83mk"; depends=[data_table dplyr ggmap ggplot2 gridExtra httr lattice maptools oce openair RColorBrewer reshape2 tictoc tidyr XML zoo]; };
+  SWMPr = derive2 { name="SWMPr"; version="2.3.0"; sha256="1z6gg8ih1m5nxm1kilpwxj4xvlbyqr67la7idrfa722y6f6264rf"; depends=[data_table dplyr ggmap ggplot2 gridExtra httr lattice maptools oce openair RColorBrewer reshape2 tictoc tidyr XML zoo]; };
   SYNCSA = derive2 { name="SYNCSA"; version="1.3.2"; sha256="1m057lhfaf0n35rs3sipia04qgkp04hv7wf7rvnr7bhzic9f4vg3"; depends=[FD mice vegan]; };
   SafeBayes = derive2 { name="SafeBayes"; version="1.1"; sha256="09bhd3z9ia2mvpn1h0hil00j6cm4x9y9ymxc3gj8wd4ybdi3jqlm"; depends=[]; };
   SafeQuant = derive2 { name="SafeQuant"; version="2.3.1"; sha256="0rgi0ij33sdvkpmjynfmsj0f29kl9l9ylsqckg5x4v49m6mzq1yh"; depends=[Biobase corrplot data_table epiR gplots limma optparse seqinr]; };
@@ -3361,13 +3438,12 @@ in with self; {
   SampleSize4ClinicalTrials = derive2 { name="SampleSize4ClinicalTrials"; version="0.1.0"; sha256="0wx1rfyf753wppjwwb3l1zpmg4b2mwnwjcw45yzav54yxaszy2v3"; depends=[]; };
   SampleSizeMeans = derive2 { name="SampleSizeMeans"; version="1.1"; sha256="1wbc46n8b8wbcxl21blbzs5728dr8r0l8d3jpzbha8pcav0xrh1m"; depends=[]; };
   SampleSizeProportions = derive2 { name="SampleSizeProportions"; version="1.0"; sha256="0mvkvx3nni0l8ys68sq3h2zlbjvksdcdzxqlf03k0ca5bbcmdf9l"; depends=[]; };
-  SamplerCompare = derive2 { name="SamplerCompare"; version="1.2.7"; sha256="149ipraps9dngmvpy5w5q9a1zgnwqblhawrk6184g52ij33jv4ji"; depends=[mvtnorm]; };
-  SamplingStrata = derive2 { name="SamplingStrata"; version="1.1"; sha256="0yxwkj61l6s29yz4adg6im7imx7vz6v9lkvdyr04cig0dhikxch1"; depends=[memoise]; };
+  SamplerCompare = derive2 { name="SamplerCompare"; version="1.2.9"; sha256="1fl9wgbfnkn2ai4swspl88crqpgd9b43hj8rkqkky4b49b8f6bj8"; depends=[mvtnorm]; };
+  SamplingStrata = derive2 { name="SamplingStrata"; version="1.2"; sha256="1qz0pcmp8a9wbq8qx1j2bv1j4makx97v9n4aiklagnmszg2gvggy"; depends=[memoise]; };
   SanFranBeachWater = derive2 { name="SanFranBeachWater"; version="0.1.0"; sha256="18w2q3hzcrbmagnjyrn1ikwiyjh723mjb2vy0d8p1a6za0460p9w"; depends=[dplyr lubridate magrittr readr rvest tibble xml2]; };
   Scale = derive2 { name="Scale"; version="1.0.4"; sha256="1fa3840kji34qpbw6mxfavk8wq0vq0vx2w6ya71idbkxnvwc3y06"; depends=[Hmisc MASS psych]; };
   SchemaOnRead = derive2 { name="SchemaOnRead"; version="1.0.2"; sha256="0xa53mqmv31gid6n82bnfmds6p8nkjlmkj15hyycxhja2j752knm"; depends=[caTools foreign haven ncdf4 network readbitmap readODS readxl tiff xml2]; };
-  SciViews = derive2 { name="SciViews"; version="0.9-5"; sha256="199waafpn0ndg7szwfhw2jlgcx1f0pv7j0vix2vzz60knwm698xb"; depends=[ellipse MASS]; };
-  SciencesPo = derive2 { name="SciencesPo"; version="1.4.1"; sha256="1y9ymm5h6mmcx1ncl7yq2nn681gm0hd25fgxxwill9bzpy34pdnr"; depends=[data_table ggplot2 htmltools lubridate pander Rcpp rstudioapi shiny stringr xtable]; };
+  SciViews = derive2 { name="SciViews"; version="0.9-13"; sha256="11zkq3dz2c7l8qxm3wrr3b5bb9h70sf9qxaz983lqwpjva30baa8"; depends=[ellipse]; };
   ScoreGGUM = derive2 { name="ScoreGGUM"; version="1.0"; sha256="0f7sjfr3a8b8y1n9lrwyiyyljls3rbz84d9s93psi2fnmjj0kvgw"; depends=[]; };
   ScottKnott = derive2 { name="ScottKnott"; version="1.2-5"; sha256="1ywwhdghcy30mp2nhsk2yhgb37nrdmb9yan5vvzsg66bchc3xgll"; depends=[]; };
   ScottKnottESD = derive2 { name="ScottKnottESD"; version="2.0.2"; sha256="08pg51rjvb29fhv8wx03q6ncfw616pszgpcdywkplbgab26rrx1q"; depends=[car effsize forecast reshape2]; };
@@ -3382,35 +3458,34 @@ in with self; {
   SeerMapperEast = derive2 { name="SeerMapperEast"; version="1.2.0"; sha256="1bafxrfjdq4ipml6zl6ng3piz8i6izm3b2daf8k1041mlbb35k6f"; depends=[sp]; };
   SeerMapperRegs = derive2 { name="SeerMapperRegs"; version="1.2.0"; sha256="16byqrwmjwhgsfav344m99jpl403k9ajqgv74ibwms9319xqfz59"; depends=[sp]; };
   SeerMapperWest = derive2 { name="SeerMapperWest"; version="1.2.0"; sha256="1mq88ljz86bk4mjj6pmrd8k61rf69s7g1j8by4c0s3c6fnkwb3qg"; depends=[sp]; };
-  SegCorr = derive2 { name="SegCorr"; version="1.1"; sha256="1hfkwfq4s3xm0wip82v000x5axkzkn4vkv6wima4mrnlvwi2yb9k"; depends=[cghseg]; };
+  SegCorr = derive2 { name="SegCorr"; version="1.2"; sha256="1g4bwfs539jf7ckzjyindi3v1av7vd38yz16m7cb20qqa0a33kbj"; depends=[jointseg]; };
   Segmentor3IsBack = derive2 { name="Segmentor3IsBack"; version="2.0"; sha256="0c7ag9svd1xlm60padg41gvz7qnbcp41kg3cz2dvi9hy2yrqw0qd"; depends=[]; };
   Sejong = derive2 { name="Sejong"; version="0.01"; sha256="1d9gw42dbs74w7xi8r9bs6dhl23y16yxqzyhqqayvcm98q3l77nf"; depends=[]; };
   SeleMix = derive2 { name="SeleMix"; version="1.0.1"; sha256="1qzy59wbjh8llm66l70xi0p3lv94iawh2h5vwa9sqy2ra5vmpaxk"; depends=[mvtnorm]; };
-  Select = derive2 { name="Select"; version="1.1"; sha256="16ih65dfk6s8xkn1mqdn2391x40lzlmfsv46g01ngpsym4dry8dq"; depends=[lattice latticeExtra Rsolnp]; };
+  Select = derive2 { name="Select"; version="1.2"; sha256="0ljlh7zj4r3izns47sa8bx17ll0ki6p02fpjxwghy1hz9k6ak9ir"; depends=[lattice latticeExtra Rsolnp]; };
   SelvarMix = derive2 { name="SelvarMix"; version="1.2.1"; sha256="02d16ffw5syq0d3yiim9jgrjlz99n956zxp23idpsmq6lb2whq66"; depends=[glasso Rcpp RcppArmadillo Rmixmod]; };
-  SemiCompRisks = derive2 { name="SemiCompRisks"; version="2.7"; sha256="092mf3dfwa78rh9bh3a4f2gsflax013100a4zld47j5lkp24diy4"; depends=[MASS survival]; };
+  SemiCompRisks = derive2 { name="SemiCompRisks"; version="2.8"; sha256="1f4cpqjb737fz6iiadhdi1ansfi5wj1zl403b3xw7l20k4f39952"; depends=[MASS survival]; };
   SemiMarkov = derive2 { name="SemiMarkov"; version="1.4.3"; sha256="1qfsy88bd07xk3gy2r7cjcs6fhx9889aqn1494d92msxmc6zvcz7"; depends=[MASS numDeriv Rsolnp]; };
   SemiPar = derive2 { name="SemiPar"; version="1.0-4.1"; sha256="05gnk4s0d6276rmnyyv6gy1wpkji3sw563n8l7hmi9qqa19ij22w"; depends=[cluster MASS nlme]; };
   SemiParSampleSel = derive2 { name="SemiParSampleSel"; version="1.5"; sha256="0apbg8sddz2ab9170wvf7p6cgawvp4w13r97r5q7p3hx2hylb8sw"; depends=[CDVine copula gamlss_dist magic Matrix matrixStats mgcv mvtnorm trust VGAM]; };
   SenSrivastava = derive2 { name="SenSrivastava"; version="2015.6.25"; sha256="0r4p6wafnfww07kq19lfcs96ncfi0qrl8n9ncp441ri9ajwj54qk"; depends=[]; };
-  SensMap = derive2 { name="SensMap"; version="0.4"; sha256="0qcdlw5zg6rxgrzy48pc4w6s32yccylz5jwkincbn0wcvaaxmvjy"; depends=[doBy factoextra FactoMineR fields ggdendro ggfortify ggplot2 glmulti lattice MCMCpack mgcv plotly shiny]; };
+  SensMap = derive2 { name="SensMap"; version="0.6"; sha256="0j52aplvdlwwfswyrij0vv7zsdr015cn5931c6631rlps94gka0w"; depends=[doBy factoextra FactoMineR fields ggdendro ggplot2 glmulti lattice MCMCpack mgcv plotly shiny]; };
   SensMixed = derive2 { name="SensMixed"; version="2.0-10"; sha256="0r2lga40xr782n1viyxc4wn9gzgm7g2ick45pfnkgq6m60wx9rfh"; depends=[doBy ggplot2 Hmisc lme4 lmerTest plyr reshape2 shiny shinyBS xtable]; };
   SensitivityCaseControl = derive2 { name="SensitivityCaseControl"; version="2.1"; sha256="00jqzqx7g0av9lw13is723gph486gb8ga0wgcmmzpmb24s5nya9z"; depends=[]; };
-  SensoMineR = derive2 { name="SensoMineR"; version="1.20"; sha256="1qw97cixndg2h29bbpssl0rqag3w8im4nm9964lr7r012y5wdqhx"; depends=[cluster FactoMineR KernSmooth]; };
+  SensoMineR = derive2 { name="SensoMineR"; version="1.23"; sha256="0a1s2wrb86a0y2faxj5ax8fa6vfcclgg7bcff4j7jb40ilxnxhn4"; depends=[AlgDesign cluster FactoMineR ggplot2 gtools KernSmooth reshape2]; };
   SensusR = derive2 { name="SensusR"; version="2.2.0"; sha256="0ahgy6mvlxfdavdarmfmb1ld1pykhbrjgg8mdh5q71b3a75vbp47"; depends=[ggmap ggplot2 jsonlite lubridate openssl plyr R_utils]; };
   SentimentAnalysis = derive2 { name="SentimentAnalysis"; version="1.3-0"; sha256="098w4kcd6xsgwi996plm06nmyg8f7sg9wjphymmfl29k5y2zyz4s"; depends=[ggplot2 glmnet mgcv moments ngramrr qdapDictionaries SnowballC spikeslab stringdist tm XML]; };
   SeqAlloc = derive2 { name="SeqAlloc"; version="1.0"; sha256="04rhr3gb2p9i35a3x4k8m0lv42ncfqlhx6sf3bq8yihppwrag8x3"; depends=[]; };
   SeqFeatR = derive2 { name="SeqFeatR"; version="0.2.4"; sha256="0wk40lhx2bjyfl8gcv9g1c3bm7kf3b12pfdb0zk22vcp2flr0mci"; depends=[ape Biostrings calibrate coda ggplot2 phangorn plotrix plyr qvalue R2jags scales tcltk2 widgetTools]; };
   SeqGrapheR = derive2 { name="SeqGrapheR"; version="0.4.8.5"; sha256="041hlf64zbndz76r076pmym4dw4xl3fahryvpvjspw0sdlhmfm8c"; depends=[Biostrings cairoDevice gWidgets gWidgetsRGtk2 igraph rggobi]; };
-  SeqKat = derive2 { name="SeqKat"; version="0.0.4"; sha256="0n6crb2lvyvx86k3ipyc29q5g4f452pdn3c77303y6jhbpy4hcjd"; depends=[doParallel foreach Rcpp]; };
   SeqMADE = derive2 { name="SeqMADE"; version="1.0"; sha256="0nf1xjhk0kpmmzgcxycg3ccxvwq6gydjq7xq6n9m7k7v35v9v3qf"; depends=[MASS]; };
   SequenceAnalysis = derive2 { name="SequenceAnalysis"; version="1.3"; sha256="0jrpq5ryw7rwkv99w0a5p3r0vj8nbzj6adlcsr84d9ffgxafmhif"; depends=[XML]; };
   Sequential = derive2 { name="Sequential"; version="2.3.2"; sha256="01zvgvdj57js08krskahk1ng3wkv9iblmirslgrmllf4q18zwsdr"; depends=[]; };
   SequentialDesign = derive2 { name="SequentialDesign"; version="1.0"; sha256="1gi37pixwbpy7358id1c75rckr352hs8vjs8sk8qgsr97pkm5xdq"; depends=[Sequential]; };
-  SetMethods = derive2 { name="SetMethods"; version="2.1"; sha256="1n6pd6cs11qahbfimqg1mskvq364gs1hvjbyygr49pv28cb3rig7"; depends=[betareg lattice QCA]; };
+  SetMethods = derive2 { name="SetMethods"; version="2.3"; sha256="10xzvr7xfv2vwa3byw4qb3v8gi8d36w9drjzqsxx52ffnjb95670"; depends=[betareg fmsb lattice QCA]; };
   SetRank = derive2 { name="SetRank"; version="1.1.0"; sha256="0p7vwsw05s5hfw1mfh3fbm9nfzsymnxzrdjin7k21dx7asb618wy"; depends=[data_table igraph XML]; };
   SetTest = derive2 { name="SetTest"; version="0.1.0"; sha256="0b5lkdhaymi3vsx9acdn9jxvqwwsac9lbdr43c44c06gglqlvk47"; depends=[]; };
-  Seurat = derive2 { name="Seurat"; version="2.1.0"; sha256="1hqaq6bciikrsyw157w8fn4jw885air7xbkxrmism93rp4qx483x"; depends=[ape caret cowplot diffusionMap dplyr dtw FNN fpc gdata ggjoy ggplot2 gplots gridExtra Hmisc ica igraph irlba lars MASS Matrix mixtools NMF pbapply plotly ranger RColorBrewer Rcpp RcppEigen RcppProgress reshape2 ROCR Rtsne SDMTools stringr tclust tidyr tsne VGAM]; };
+  Seurat = derive2 { name="Seurat"; version="2.2.1"; sha256="1sr82nf38hq07avrfn8vlrzjq7dfm4pcr8l1nh6mnglcql2bk9z2"; depends=[ape caret cowplot diffusionMap dplyr dtw FNN fpc gdata ggplot2 ggridges gplots gridExtra Hmisc ica igraph irlba lars MASS Matrix metap mixtools pbapply plotly ranger RColorBrewer Rcpp RcppEigen RcppProgress reshape2 ROCR Rtsne SDMTools stringr tclust tidyr tsne VGAM]; };
   ShapeChange = derive2 { name="ShapeChange"; version="1.4"; sha256="1ch7avx8mxjk8vrp17inaihmbsv968wflyk1n4fbjvacbl24vn2b"; depends=[coneproj quadprog]; };
   ShapePattern = derive2 { name="ShapePattern"; version="1.0.1"; sha256="18jzs0sq21qhldm86mgx7yb9kl473vv1aljl9hm4560xy5pd5fnb"; depends=[rgdal rgeos sp]; };
   ShapeSelectForest = derive2 { name="ShapeSelectForest"; version="1.3"; sha256="1vvfl1ldrn0l9w38hx0hhszvj5a2dpmfl6ljzw7f0ji181lrx96m"; depends=[coneproj raster rgdal]; };
@@ -3421,7 +3496,7 @@ in with self; {
   ShortForm = derive2 { name="ShortForm"; version="0.3.0"; sha256="03yxn535yv11l5ckw26jd0maf2k0xpvichid5vwn0vb1f6ryk1xn"; depends=[lavaan MplusAutomation]; };
   ShrinkCovMat = derive2 { name="ShrinkCovMat"; version="1.2.0"; sha256="1ybd8vm69y50lj2mkmcdyplxb689xfg4spbl129v8hlvhw69mzmy"; depends=[]; };
   SiER = derive2 { name="SiER"; version="0.1.0"; sha256="1ng6vnh30z6z1nvclsdzc9gdbrsrb2kqdqvs6fwm0j1zqlk12x0y"; depends=[]; };
-  SiMRiv = derive2 { name="SiMRiv"; version="1.0.2"; sha256="1hw71qifj30mr750aci82i14a1r85mgaqb6yd0by39rf96qw7s8i"; depends=[mco raster rgdal sp]; };
+  SiMRiv = derive2 { name="SiMRiv"; version="1.0.3"; sha256="1kzvbzmqcxs0sh23nmjd39zkg68kbnc5djpbjhqhn55qjdfx5776"; depends=[mco raster rgdal sp]; };
   SiZer = derive2 { name="SiZer"; version="0.1-4"; sha256="0kiwvxrfa2b49r2iab5v2aysc2yzk5ck3h41f2hr0vq5pdnz0qy5"; depends=[boot]; };
   SigOptR = derive2 { name="SigOptR"; version="0.0.1"; sha256="1sylchhhz6kx4r8jx95cvsmjsacjh8pin7acf2fyw2a4nlx9r1a6"; depends=[httr jsonlite]; };
   SigTree = derive2 { name="SigTree"; version="1.10.6"; sha256="18gh7azjr979ijc2y4yyskj24ay697rw3j7znc5p4a63s4vpxr9w"; depends=[ape MASS phyext2 phylobase phyloseq RColorBrewer vegan]; };
@@ -3430,13 +3505,15 @@ in with self; {
   Sim_DiffProc = derive2 { name="Sim.DiffProc"; version="4.0"; sha256="04p6q3g0afyky2ljxf471axik6vwj9l4dv4r487jrykrlhnjrm4z"; depends=[Deriv MASS rgl scatterplot3d]; };
   Sim_PLFN = derive2 { name="Sim.PLFN"; version="1.0"; sha256="1jmsydhpfv2z9cr99hfy8cairhkkxpwk4wnz1adixwxazkn7qfah"; depends=[DISTRIB FuzzyNumbers]; };
   SimComp = derive2 { name="SimComp"; version="3.2"; sha256="04rmpxasaa888p6f0rhhpvpqc39fppdkcwbq5sxcslx7bwc9w9z8"; depends=[mratios multcomp mvtnorm]; };
+  SimCop = derive2 { name="SimCop"; version="0.7.0"; sha256="1yrdy77a9h14v92c63ng8phi2ig73wy4xjjdb75322grc0bd3jq6"; depends=[quadprog]; };
   SimCorMultRes = derive2 { name="SimCorMultRes"; version="1.5.0"; sha256="10afb3k4rvsmgfx6m1csb0pvnjba1d896llfh3ksmjzxglmvslgw"; depends=[evd]; };
-  SimDesign = derive2 { name="SimDesign"; version="1.8"; sha256="015kkd7bizgdnynkyr1nl2bwssm4hjr5mg5gmrs6ikd8g04fzjnz"; depends=[foreach pbapply plyr]; };
+  SimDesign = derive2 { name="SimDesign"; version="1.9"; sha256="1pwci1n7psrsv4mbl1mw3806cilmf3y9v507cdlzcd8jxl354vj7"; depends=[foreach pbapply plyr]; };
   SimHaz = derive2 { name="SimHaz"; version="0.1"; sha256="04q4xyc1ki1zr3grm3khfg0kbykjy3j9qpg332l7pxp4j3wa3aw3"; depends=[survival]; };
   SimInf = derive2 { name="SimInf"; version="5.1.0"; sha256="0ylkz6vybwza7fk24f4gybwm4afp0kcx0hlbl05jpif9gmwx6n3s"; depends=[Matrix]; };
   SimMultiCorrData = derive2 { name="SimMultiCorrData"; version="0.2.1"; sha256="08zd9bvi3vi2nz3ljaw9rymmqwg1k9yislk3s4ak3jgqmcaq9zls"; depends=[BB GenOrd ggplot2 Matrix nleqslv psych triangle VGAM]; };
   SimPhe = derive2 { name="SimPhe"; version="0.1.1"; sha256="00qqqsf7na5c9nslnfpbyr2ysf7d7bi6vnpfiy761nhg8vgf2vjv"; depends=[]; };
   SimRAD = derive2 { name="SimRAD"; version="0.96"; sha256="0ivvd3k04v1akbblxcjhlyc315z3ig7wjs0g3b37lvlfp54ppbrg"; depends=[Biostrings ShortRead zlibbioc]; };
+  SimRVPedigree = derive2 { name="SimRVPedigree"; version="0.1.0"; sha256="1krdz4gxnqxj3wabc5hn7ayfqdfmpgg66zj09b3jnngcdaxkjlwb"; depends=[dplyr kinship2]; };
   SimReg = derive2 { name="SimReg"; version="3.0"; sha256="188q399xcrvjw7y7lf3hfbb7x0m0hc4zaf9i1w2c4xzswmvljd8r"; depends=[ontologyIndex ontologyPlot ontologySimilarity Rcpp]; };
   SimSCRPiecewise = derive2 { name="SimSCRPiecewise"; version="0.1.1"; sha256="0mhlx9m5db8a40wf275qh59345676m8bpjjmyx1v22f6m9p3b2n4"; depends=[]; };
   SimSeq = derive2 { name="SimSeq"; version="1.4.0"; sha256="068gg484w07qb4wajik2s3z79xfj0jg5l4pz69267dxi5kzd9fas"; depends=[fdrtool]; };
@@ -3474,20 +3551,22 @@ in with self; {
   SocialPosition = derive2 { name="SocialPosition"; version="1.0.1"; sha256="1rrrjlq6czzhzipvkisbq024ca22v2vzx7wa4ddr9j7hnyyzzpic"; depends=[]; };
   Sofi = derive2 { name="Sofi"; version="0.16.4.8"; sha256="0h9ir0xrwmsabfhwsr9hbpwabh1fsb3p51y8qcgm92iyvc6dl3mf"; depends=[foreign sampling shiny]; };
   SoftClustering = derive2 { name="SoftClustering"; version="1.1502"; sha256="1pgg9mjpfw55m3ny726vx5wl8gwsdkrxv8xzgmy3aqdlwzhh4bwz"; depends=[]; };
+  SoilHyP = derive2 { name="SoilHyP"; version="0.1.0"; sha256="030xzhd2mfibj4z3d73zplx814w9mpsf08bdllj6crqd9ipj4sbq"; depends=[]; };
   SoilR = derive2 { name="SoilR"; version="1.1-23"; sha256="1cryypgnbck5hvkc2izrd8r10q2b97f2p1s46x4dk8p099gck5wg"; depends=[deSolve RUnit]; };
+  SolveLS = derive2 { name="SolveLS"; version="1.0"; sha256="0yb2sx3wjhccmkq8p3jj5pp8dgsdfvv4hr88km5yajl950wkbizp"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; };
   SorptionAnalysis = derive2 { name="SorptionAnalysis"; version="0.1.0"; sha256="0drns1ajcga5z56hcgjxld1riwjn7vli8k1ma1xqifpy1qwy7ci6"; depends=[]; };
   SortableHTMLTables = derive2 { name="SortableHTMLTables"; version="0.1-3"; sha256="1jgrqsm0cj8qlk0s4qn3b83w96mgpp5gmhgcg9q2glc72v8c4ljh"; depends=[brew testthat]; };
   SoundexBR = derive2 { name="SoundexBR"; version="1.2"; sha256="0chc332v3wcz30v70yvdxhvcfdmvf4fj193cn00gl899xfxal89p"; depends=[]; };
-  SoyNAM = derive2 { name="SoyNAM"; version="1.3"; sha256="128iq8rrj6nm8zdqrv17gsjxzdsfashgzk1k7lnw38w04a2g05zs"; depends=[lme4 NAM reshape2]; };
+  SoyNAM = derive2 { name="SoyNAM"; version="1.4"; sha256="0b48nm3xgvzws9222fmq07chqx4yllz4qjgzxg156s0waxfrjjfi"; depends=[lme4 NAM reshape2]; };
   SpATS = derive2 { name="SpATS"; version="1.0-6"; sha256="04ahj3haaxrpxijxcq2n922li3g6az29ibsmdhxf72dnr5v2qn63"; depends=[data_table fields plot3Drgl spam]; };
   SpaCCr = derive2 { name="SpaCCr"; version="0.1.0"; sha256="0qm1fr6nnax3i1i77fi73x1z8db557avh6kivs0nskb1dfj8ri4m"; depends=[abind dplyr ggplot2 Rcpp RcppArmadillo tidyr]; };
-  SpaDES = derive2 { name="SpaDES"; version="2.0.0"; sha256="1fbf40qyb0nhvk1sdzxwn7g3p73v325z9mkij1mzgjyprb91i9k9"; depends=[quickPlot reproducible SpaDES_addins SpaDES_core SpaDES_tools]; };
-  SpaDES_addins = derive2 { name="SpaDES.addins"; version="0.1.0"; sha256="0jggwywzs5i9v3xvyqk6j39mwp45zjhh145pb972yrdivxlw6vhc"; depends=[devtools magrittr miniUI rstudioapi shiny SpaDES_core stringi]; };
-  SpaDES_core = derive2 { name="SpaDES.core"; version="0.1.0"; sha256="17gr386xxp22i5ln7grd1dbfxmkwfs0fnhyd7v40lmwdknj7myl7"; depends=[chron CircStats data_table DEoptim DiagrammeR digest dplyr fastdigest fpCompare httr igraph lazyeval lubridate quickPlot R_utils RandomFields raster reproducible sp stringi]; };
-  SpaDES_tools = derive2 { name="SpaDES.tools"; version="0.1.0"; sha256="178xcvh5m5hkyjiqq6bgk6a7r7nrfd4fv5r6g27b26inxlpxc2bg"; depends=[bit checkmate CircStats data_table fastdigest fastmatch ff ffbase fpCompare magrittr quickPlot RandomFields raster Rcpp reproducible sp]; };
+  SpaDES = derive2 { name="SpaDES"; version="2.0.1"; sha256="00l05kc7mgip41r8yqq3nk2mr5i0acal2b4man5lsgb5vblp4ij9"; depends=[quickPlot reproducible SpaDES_addins SpaDES_core SpaDES_tools]; };
+  SpaDES_addins = derive2 { name="SpaDES.addins"; version="0.1.1"; sha256="0sipgq00lacy7yk81crr8h7xfm4vs4h66w6rqsll8i7di19g13cj"; depends=[devtools magrittr miniUI rstudioapi shiny SpaDES_core stringi]; };
+  SpaDES_core = derive2 { name="SpaDES.core"; version="0.1.1"; sha256="12w2yr4q440n68p4gcj82h7gzjd240khfxjwxpngfbhbgp7rmv4b"; depends=[crayon data_table DEoptim DiagrammeR digest dplyr fastdigest fpCompare httr igraph lubridate quickPlot R_utils raster RCurl reproducible sp stringi]; };
+  SpaDES_tools = derive2 { name="SpaDES.tools"; version="0.1.1"; sha256="0qfwcgy0nx4754zqi8fhk6q11yv9c5w6pa0wds6szga53hwwdi8g"; depends=[bit checkmate CircStats data_table digest fastdigest fastmatch ff ffbase fpCompare httr magrittr quickPlot RandomFields raster Rcpp reproducible sp]; };
   SpaTimeClus = derive2 { name="SpaTimeClus"; version="1.0"; sha256="1l204b8yd11pxwcb026xy39f4lps4sqk6mml8cybnjch8clk9djc"; depends=[Rcpp RcppArmadillo]; };
   SpadeR = derive2 { name="SpadeR"; version="0.1.1"; sha256="0iy2rkq4vvps1a73kqq37zpsyl4pvl3vh07dwvpfhvp7f8nxbx99"; depends=[]; };
-  SparseDC = derive2 { name="SparseDC"; version="0.1.14"; sha256="1ji01gdkks8g5shqf1qlvhq67a70jlsxqiyryiq13l678ibhngay"; depends=[]; };
+  SparseDC = derive2 { name="SparseDC"; version="0.1.17"; sha256="0gsfj8631s67a0r9qjjll4rbb57nzk5fwm5bbggvf0027b9hk0pp"; depends=[]; };
   SparseFactorAnalysis = derive2 { name="SparseFactorAnalysis"; version="1.0"; sha256="0lgfvydxb86r5hks1mf0p0yhgpx8s8fbkc3q6dimc728rw26qcv5"; depends=[directlabels ggplot2 MASS proto Rcpp RcppArmadillo truncnorm VGAM]; };
   SparseGrid = derive2 { name="SparseGrid"; version="0.8.2"; sha256="057xbj2bhjm9i32kn39iscnqqdsvsmq0b8c92l8hnf9avf1sx10x"; depends=[]; };
   SparseLearner = derive2 { name="SparseLearner"; version="1.0-2"; sha256="1qxycxpch2m2yyk97210gdzsizhlinc0hkhk5ak00rdgkrsxxc0k"; depends=[glmnet lqa mlbench qgraph RankAggreg SIS SiZer]; };
@@ -3496,15 +3575,16 @@ in with self; {
   SpatMCA = derive2 { name="SpatMCA"; version="1.0.0.2"; sha256="1xm29ybbdxspj2ylkkd9qh17sizz1gkc3l34y3d0ivmxz64vn6pj"; depends=[fields MASS Rcpp RcppArmadillo RcppParallel]; };
   SpatPCA = derive2 { name="SpatPCA"; version="1.1.1.2"; sha256="0v694bmfgwhpz2072f7gshqasd2vywvrbk5ncwq74xk5qrcpx9i7"; depends=[Rcpp RcppArmadillo RcppParallel]; };
   SpatialAcc = derive2 { name="SpatialAcc"; version="0.1-2"; sha256="1nyxxwvlnhz78pw31dqijp1crlar5nak5934s4h0a4sajv9syif2"; depends=[]; };
+  SpatialBall = derive2 { name="SpatialBall"; version="0.1.0"; sha256="09iy1smfqnb0rd2s9a1wqgscb1plwcwwph6a8215l4zrs6svszv2"; depends=[dplyr ggplot2 hexbin lubridate RColorBrewer]; };
   SpatialEpi = derive2 { name="SpatialEpi"; version="1.2.2"; sha256="172i4khjb2fh818bq7wdfdm79fwxjwi60nqfj69dgbgcaww55ffr"; depends=[maptools MASS Rcpp RcppArmadillo sp spdep]; };
   SpatialEpiApp = derive2 { name="SpatialEpiApp"; version="0.3"; sha256="0svnnzqshk08s58ishy8xhqch44mb5svgfphkvpgysdd68dgaysr"; depends=[dplyr dygraphs ggplot2 htmlwidgets knitr leaflet mapproj maptools RColorBrewer rgdal rgeos rmarkdown shiny shinyjs SpatialEpi spdep xts]; };
-  SpatialExtremes = derive2 { name="SpatialExtremes"; version="2.0-5"; sha256="0p56h2dbdgbxzvfrdjnbr1yxr3wrlsrfgfgk4j8gf4nb4j6mrbiz"; depends=[fields maps]; };
+  SpatialExtremes = derive2 { name="SpatialExtremes"; version="2.0-6"; sha256="14clsb7w7p39ak00127lfa7irl67vqydvafkj8vs8qn9i3kaj6iz"; depends=[fields maps]; };
   SpatialFloor = derive2 { name="SpatialFloor"; version="1.0.3"; sha256="14nbl0kb4c46kxvw900d972n78x6q0y9039l6p4r9w2i9ir7g1yh"; depends=[fields reshape2]; };
   SpatialNP = derive2 { name="SpatialNP"; version="1.1-2"; sha256="048zzyy3hav8qg0zad2fsv5z1avdppwwdcv0rc6j635wzhdmsl1j"; depends=[]; };
   SpatialPack = derive2 { name="SpatialPack"; version="0.2-3"; sha256="1gs0x3wj3hj663m6kszwhy3ibcx0lrslr127miy1rhz8683ij71c"; depends=[]; };
   SpatialPosition = derive2 { name="SpatialPosition"; version="1.2.0"; sha256="140fg3bjj7383nrdbgnk9lccj4yjq65rkprqpmf4q0mwbc89mmqc"; depends=[raster rgdal rgeos sp]; };
   SpatialTools = derive2 { name="SpatialTools"; version="1.0.2"; sha256="0n8l4k0dm9gwirhxwrajv5gx502px9qzlqi6skzx0k32hmymnazh"; depends=[Rcpp RcppArmadillo spBayes]; };
-  SpatialVx = derive2 { name="SpatialVx"; version="0.6-1"; sha256="1yscz5w6ydh87qh4ncgn6br49pzg08nqgx95m5bmydqx2r74h9jg"; depends=[boot CircStats distillery fastcluster fields maps smatr smoothie spatstat turboEM waveslim]; };
+  SpatialVx = derive2 { name="SpatialVx"; version="0.6-2"; sha256="12kwwhxlvlkss1rg9ipaw97l5kw50m7crpcpv1y420sf14873j7r"; depends=[boot CircStats distillery fastcluster fields maps smatr smoothie spatstat turboEM waveslim]; };
   SpatioTemporal = derive2 { name="SpatioTemporal"; version="1.1.7"; sha256="0rc5zf8cnjw59azgqmslfz2dl5i17dfmb7ls5c849qybp2gn2zdv"; depends=[MASS Matrix]; };
   SpecHelpers = derive2 { name="SpecHelpers"; version="0.2.7"; sha256="1v3v717ah2fkx9225860dwppdf5m6nnnaaa4iwmj30rn17nqr4jh"; depends=[gsubfn splancs]; };
   SpeciesMix = derive2 { name="SpeciesMix"; version="0.3.4"; sha256="0d6hfmzxqcvg4fcvpsfxx36k95fwkws4rlylrixikndj2fncgwb5"; depends=[MASS numDeriv]; };
@@ -3522,10 +3602,10 @@ in with self; {
   Stack = derive2 { name="Stack"; version="2.0-1"; sha256="09fgfhw9grxnpl5yg05p9gvlz38iw4prns1jn14nj3qx01k5rnxb"; depends=[bit ff ffbase plyr stringr]; };
   StagedChoiceSplineMix = derive2 { name="StagedChoiceSplineMix"; version="1.0.0"; sha256="1008gm6zv5k8lpv0qg42qjriajmx0n4kshjh76mvx91dpi788ivh"; depends=[plyr]; };
   StakeholderAnalysis = derive2 { name="StakeholderAnalysis"; version="1.2"; sha256="164mah8h8izxaqp8hc43l6mlnf95pydkcx2laqrlqr9b0bybadxb"; depends=[]; };
-  StanHeaders = derive2 { name="StanHeaders"; version="2.16.0-1"; sha256="0i1gq32ys7iwgbdrwc86ww8kj5aqc7jbl663dynackb7wmqwlb7r"; depends=[]; };
+  StanHeaders = derive2 { name="StanHeaders"; version="2.17.2"; sha256="11fcc59z63rkgk6pp5vhb5avjlbhbjs2v5mn496ai9jms4223ivc"; depends=[]; };
   StandardizeText = derive2 { name="StandardizeText"; version="1.0"; sha256="0s267k2b109pcdiyd26gm4ag5afikrnnb55d3cs6g2fvzp744hfp"; depends=[]; };
   Stat2Data = derive2 { name="Stat2Data"; version="1.6"; sha256="0pk68ffc6ffpddfpf9wi8ch39h6k3r80kldld3z5pnql18rc8nvx"; depends=[]; };
-  StatCharrms = derive2 { name="StatCharrms"; version="0.90.6"; sha256="1631zkjyqd3bw5ijh250hcklagx9xy5x5dks4v7qgzb730c7a9f6"; depends=[cairoDevice car clinfun coxme gWidgets gWidgetsRGtk2 lattice multcomp nlme R2HTML RGtk2 RSCABS survival]; };
+  StatCharrms = derive2 { name="StatCharrms"; version="0.90.7"; sha256="082pwqn08b9ij0vmc68sf43fin2hp16mlpi3d0i9ynpda9v22nr8"; depends=[cairoDevice car clinfun coxme gWidgets gWidgetsRGtk2 lattice multcomp nlme R2HTML RGtk2 RSCABS survival]; };
   StatDA = derive2 { name="StatDA"; version="1.6.9"; sha256="01bjygis14b3yfsfkjbvy0zlhjxysjf46cfcw8p4a4lwik3qp03b"; depends=[cluster e1071 geoR MASS MBA mgcv rgl robustbase sgeostat xtable]; };
   StatDataML = derive2 { name="StatDataML"; version="1.0-26"; sha256="1lcckapbhqdbg6alnhm2yls66lnkxnxamdlzx6pbfqv1dhsy36gf"; depends=[XML]; };
   StatMatch = derive2 { name="StatMatch"; version="1.2.5"; sha256="1162yqqrxkbpchdxdibpk5ccv55krvh9j150jgr047zzghr9ansa"; depends=[clue lpSolve proxy RANN survey]; };
@@ -3533,7 +3613,6 @@ in with self; {
   StatPerMeCo = derive2 { name="StatPerMeCo"; version="0.1.0"; sha256="1nm6brlj6h7jx8nqagrfk294ay3pfmkiizabwlb87qfnsfwchpk3"; depends=[]; };
   StatRank = derive2 { name="StatRank"; version="0.0.6"; sha256="14d8v3bp8vgksi6q0mxajwd9s8zi6lns3qwi1vcr5xp9rjp4n6iy"; depends=[ggplot2 plyr truncdist]; };
   SteinIV = derive2 { name="SteinIV"; version="0.1-1"; sha256="1bm4lc7g9h9jkb1dpzb84289bwxcywp0a8vylv6ipvhiqbqk5d95"; depends=[]; };
-  SteinerNet = derive2 { name="SteinerNet"; version="2.0"; sha256="1b2jr9a1mf0b1kalm3ryq9lpw4xhsj1ac083rrdvrfb3y5psa716"; depends=[graph igraph limma RBGL]; };
   Stem = derive2 { name="Stem"; version="1.0"; sha256="1fr02mi5qyxbqavdh2hg8ggw4nfjh3vs7g0vh834h6y0v53l71r5"; depends=[MASS mvtnorm]; };
   StepReg = derive2 { name="StepReg"; version="1.0.0"; sha256="1ifdns1fpsjcbwcy19h5hxnd3an53qwba2a7gpn2571zb1phraz8"; depends=[Rcpp RcppEigen]; };
   StepSignalMargiLike = derive2 { name="StepSignalMargiLike"; version="2.5.9"; sha256="11lsjiry04m6yf4n1q0kniad6qdrj88pkziabi5glivijq0dh1wr"; depends=[Rcpp]; };
@@ -3542,13 +3621,14 @@ in with self; {
   Stickbreaker = derive2 { name="Stickbreaker"; version="1.0.0"; sha256="11g97yj61s09d1687algr9f80gcgw8fadc1vbadglxh7l9wxj6lv"; depends=[lattice nnet xtable]; };
   StockChina = derive2 { name="StockChina"; version="0.3.1"; sha256="1myxyfchnkskyqb5yciw1wfk3006f51y89ipzfjzdlfyzwy1lsp1"; depends=[]; };
   Storm = derive2 { name="Storm"; version="1.2"; sha256="1fg8y9my9yp6px1gh43mr3m2s2z262mzq03pj52mqg3n186vk8z3"; depends=[permute rjson]; };
-  StrainRanking = derive2 { name="StrainRanking"; version="1.1"; sha256="0q6k90if74320mrs2ccq2izynylr8zakciwbc2c6ms0v57aalwic"; depends=[]; };
+  StrainRanking = derive2 { name="StrainRanking"; version="1.2"; sha256="1r8avm9xajqmsy4x7pgh1yaffq7wl5i5kg75kdilydwmii6n19i0"; depends=[]; };
   StratSel = derive2 { name="StratSel"; version="1.2"; sha256="11dkhyh0xgl23f9ksxcjl6bqfhwm6k6i1chgx23dvjifbm6s5s5p"; depends=[Formula MASS memisc mnormt pbivnorm]; };
   Strategy = derive2 { name="Strategy"; version="1.0.1"; sha256="0phja1r0qfvcswvw5w1x6ny86p84wkqb029fdqgw10djdm9xp0f2"; depends=[xts zoo]; };
   StratifiedBalancing = derive2 { name="StratifiedBalancing"; version="0.2.0"; sha256="0iwzvschncb2vrmsawb6i94shn2cjbkph854x1z4ykr6ddw411g2"; depends=[plyr]; };
   StratifiedRF = derive2 { name="StratifiedRF"; version="0.2.2"; sha256="0a5djia6xacs17nnr5knr1acwzicrffz73q9nvnhdmihazq8v27d"; depends=[C50 dplyr]; };
   StreamMetabolism = derive2 { name="StreamMetabolism"; version="1.1.2"; sha256="1sv30i7armk7jhxg5x9lh0r9qq3xixn1k2h0q89halkh1yraal8a"; depends=[chron maptools zoo]; };
   StressStrength = derive2 { name="StressStrength"; version="1.0.2"; sha256="1fq26bzmwsk4nzz9bgasyxz9alw8x2ssahz67mham7vw483w79pd"; depends=[]; };
+  String2AdjMatrix = derive2 { name="String2AdjMatrix"; version="0.1.0"; sha256="058r30kjjna02nmd6ngqfcnn1yk5390i20xvl6qb5qk3bcp2wmxn"; depends=[stringr]; };
   StroupGLMM = derive2 { name="StroupGLMM"; version="0.1.0"; sha256="1w0xizdmwqflfhqwygyq7fw5ci7pdzmr8dfv3j0g3ljbj84kndzd"; depends=[aod broom car ggplot2 lme4 lmerTest lsmeans MASS mutoss nlme pbkrtest phia survey]; };
   StructFDR = derive2 { name="StructFDR"; version="1.2"; sha256="00h3mx7kf01snngkcarhyidqiycvnjhcs81x3kprgp6597md7ph1"; depends=[ape cluster dirmult matrixStats nlme]; };
   SubCultCon = derive2 { name="SubCultCon"; version="1.0"; sha256="08q6k4nsv3gl5qk87s87smdg047yc2a4i7kg0fp08i7q7h62jkvz"; depends=[]; };
@@ -3561,12 +3641,12 @@ in with self; {
   Sunclarco = derive2 { name="Sunclarco"; version="1.0.0"; sha256="0jv92a4ciwkm0wa4irgb6ql3vf6v6p24fmbnk24pqp5p8drp8g5v"; depends=[survival]; };
   Sunder = derive2 { name="Sunder"; version="0.0.4"; sha256="1na41nnscyc4v1qbwzfgqk503r39xxbi6f446pscrz3v0v121f1a"; depends=[mnormt]; };
   SunterSampling = derive2 { name="SunterSampling"; version="1.0.1"; sha256="0qfld3j8xlpgp7c58zqw6gzm38m4d740lvdj5vmcflfcc6ja98sf"; depends=[]; };
-  SuperExactTest = derive2 { name="SuperExactTest"; version="0.99.4"; sha256="0wjqvwff5ag8hh6v2plc774hk6ydsyvr6ihlp9a15v0f0p61x6bk"; depends=[]; };
+  SuperExactTest = derive2 { name="SuperExactTest"; version="1.0.0"; sha256="184s0pnwv9irqjlv24svfz3ami559ln03wjknyj67pwi4pfbzz87"; depends=[]; };
   SuperGauss = derive2 { name="SuperGauss"; version="1.0"; sha256="1yqskaz4zsx87mcb9p7081h2lilaiwa3213yxlkyihyans7gnmp8"; depends=[fftw Rcpp RcppEigen]; };
   SuperLearner = derive2 { name="SuperLearner"; version="2.0-22"; sha256="1yajqqsxfrp9ybaa8ffwdrbwm3rfy5pgp6ma1ak43qg3plclllyr"; depends=[cvAUC nnls]; };
-  SuperRanker = derive2 { name="SuperRanker"; version="1.0.1"; sha256="0s5d38xaan4jznb3nlr9rj054haf6wks0229lggykj8mfz746wky"; depends=[prodlim Rcpp]; };
+  SuperRanker = derive2 { name="SuperRanker"; version="1.1.0"; sha256="19cfz89557ygf5dvvqykmxcr72sfa0s2d37pplp6iwbhkl4wfw04"; depends=[prodlim Rcpp]; };
   SuppDists = derive2 { name="SuppDists"; version="1.1-9.4"; sha256="1ffx8wigqqvz2pnh06jjc0fnf4vq9z2rhwk2y3f9aszn18ap3dgw"; depends=[]; };
-  Surrogate = derive2 { name="Surrogate"; version="0.5"; sha256="12gsl9m2yp96pa4q5n4wmgv4p31pbjdsmiydv6iafb3jyk2pgl3w"; depends=[lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rgl rms survival]; };
+  Surrogate = derive2 { name="Surrogate"; version="0.6"; sha256="18cqcnzf64wk33qshsamija0r9xpnca0w2a8qz1ikj9r21vabhhw"; depends=[lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rgl rms survival]; };
   SurrogateTest = derive2 { name="SurrogateTest"; version="1.0"; sha256="0dw8ic2rskwhj9f013q0j5my7qfsqihfis93frrlz4qag68jddqn"; depends=[survival]; };
   SurvCorr = derive2 { name="SurvCorr"; version="1.0"; sha256="01rqdl503q1qnkn49iqnsjzis6azdsfi6s2hjky5k2zd6c9g18k5"; depends=[fields survival]; };
   SurvDisc = derive2 { name="SurvDisc"; version="0.1.0"; sha256="0iqjimrljh9iaw3s406v6j03xg62ysf9xdia1yxr2ray38j8148c"; depends=[cubature MASS mvtnorm nlme simex survival]; };
@@ -3581,7 +3661,7 @@ in with self; {
   SyNet = derive2 { name="SyNet"; version="2.0"; sha256="0mb9dscddkvmkf7l3bbcy4dlfmrvvy588vxdqy5dr783bpa5dkiw"; depends=[tkrplot]; };
   SymTS = derive2 { name="SymTS"; version="1.0"; sha256="17vhm00zd9yxl6li36bsfkm4rsizjsm93ibrzgqnkl72sqmmlwfi"; depends=[]; };
   SyncMove = derive2 { name="SyncMove"; version="0.1-0"; sha256="1jlnsj5v8y5pijfkww7ng7nkwvj93naw29wcxxj130ww5qk7qk1z"; depends=[]; };
-  SyncRNG = derive2 { name="SyncRNG"; version="1.2.1"; sha256="0360pdx2p8a6519y3ik5xfdm2yxndyl31p3bb73nj4ihmr4w6lmj"; depends=[]; };
+  SyncRNG = derive2 { name="SyncRNG"; version="1.3.0"; sha256="0sywfmmy6mq6qsxkxjc67665snn1jds01j3h7ni1200igja139g2"; depends=[]; };
   SynchWave = derive2 { name="SynchWave"; version="1.1.1"; sha256="127hllvig8kcs9gr2q14crswzhacv6v2s4zrgj50qdyprj14is18"; depends=[fields]; };
   SynergizeR = derive2 { name="SynergizeR"; version="0.2"; sha256="0z32ylrjjvp8kr6lghhg57yq1laf9r0h8l3adysvis8bbpz2q2sj"; depends=[RCurl RJSONIO]; };
   Synth = derive2 { name="Synth"; version="1.1-5"; sha256="1cfvh91nz6skjk8jv04fhwv3ga9kcsfgq3mdy8lx75jkx16zr0pk"; depends=[kernlab optimx]; };
@@ -3596,13 +3676,14 @@ in with self; {
   TBSSurvival = derive2 { name="TBSSurvival"; version="1.3"; sha256="1r87qvnlvc18i12yi25lfpdb8b5p33fywi38hs2xp1y2vbvz5s9b"; depends=[BMS coda mcmc normalp R_utils Rsolnp survival]; };
   TCGA2STAT = derive2 { name="TCGA2STAT"; version="1.2"; sha256="15a5lh0nrdcxdwj7wj5m9rsvk1ygpp6wdjb4swilk91rb1lblikv"; depends=[CNTools XML]; };
   TCGAretriever = derive2 { name="TCGAretriever"; version="1.3"; sha256="0mi8j7k2b1sx75ka8ympydqpk8jqp8wz8dyf4vk4776fra7bq24p"; depends=[httr]; };
-  TCIApathfinder = derive2 { name="TCIApathfinder"; version="1.0.1"; sha256="0jxpv0a7lyd0lb5mijpfw0pcp80h9s7bhxn9j4w7bkwsg1n59c83"; depends=[httr jsonlite testthat]; };
-  TDA = derive2 { name="TDA"; version="1.5.1"; sha256="1ab60b1wk2j4271vikbglkk12nwl77d5b9w3xqvzpcbrbjfqsmjh"; depends=[BH FNN igraph Rcpp RcppEigen scales]; };
+  TCIApathfinder = derive2 { name="TCIApathfinder"; version="1.0.2"; sha256="1fgjmz297jckdb0xsly1scq5n8y8awfgdkr4yfml4lim2mkdsigx"; depends=[httr jsonlite]; };
+  TDA = derive2 { name="TDA"; version="1.6"; sha256="1i0jgj72rpxn7icgl5f43c7lyq4jghmz4r9jn7bxa5kbavc8asy3"; depends=[BH FNN igraph Rcpp RcppEigen scales]; };
   TDAmapper = derive2 { name="TDAmapper"; version="1.0"; sha256="0cxgr2888v8azgdr3sg4vlcdyivkrxkk6dsp1ahv4frrwvg2z09k"; depends=[]; };
   TDCor = derive2 { name="TDCor"; version="0.1-2"; sha256="18085prcwhl5w717f1f7jcqskw2jvigvjjs2l5y6106ibiam6hxx"; depends=[deSolve]; };
   TDD = derive2 { name="TDD"; version="0.4"; sha256="193y8brybkjsajrbnlx1sdnw1wyyn9rhlm5wvp4aamqhvi8z13vn"; depends=[pracma RSEIS signal]; };
   TDPanalysis = derive2 { name="TDPanalysis"; version="0.99"; sha256="1kyhs4rpkm3gr55l6hrz4xcb9igk95si1m1sp175580k16n885z0"; depends=[plyr]; };
   TDboost = derive2 { name="TDboost"; version="1.2"; sha256="0sc9vby4892gm5b5h8gbdl4misqvgbkfp8fms53dk83malxkw1zx"; depends=[lattice]; };
+  TE = derive2 { name="TE"; version="0.1-1"; sha256="05xm9hlcsrcqa3yfw1rp4fb08yjkp66lcvdpw3a3fnx7k69j5p3g"; depends=[MASS rainbow]; };
   TED = derive2 { name="TED"; version="1.1.1"; sha256="0nb2arx7c1m8ymnkmj3jwbcw23vhkr1f3vlym2hqs0pq0lnsl4g0"; depends=[animation fields foreach geoR RcppArmadillo zoo]; };
   TEEReg = derive2 { name="TEEReg"; version="1.1"; sha256="0v5qz3vvmcm3fh16kjb05j1r0yj23r7hrxf2www20ng3dmga5q0f"; depends=[]; };
   TELP = derive2 { name="TELP"; version="1.0"; sha256="0wzm3dz0489ha7dd6lkashvvjydck9jw2pavlx9plpksvzr4q9ph"; depends=[arules arulesViz ggplot2 gridExtra RColorBrewer tcltk2 tm wordcloud]; };
@@ -3622,7 +3703,7 @@ in with self; {
   TLBC = derive2 { name="TLBC"; version="1.0"; sha256="08w187akbhfbz6nrrf7avf02lrhgj7bbrjmim9gkh4wlbjhzvw67"; depends=[caret HMM randomForest signal stringr]; };
   TLMoments = derive2 { name="TLMoments"; version="0.7.2.1"; sha256="1xgkbdnh79dj54jg5kf0c5kwykcvjaf4y16yyqf0vcc7aand6a3y"; depends=[hypergeo Rcpp]; };
   TLdating = derive2 { name="TLdating"; version="0.1.3"; sha256="12lmakk1zd6wqh1318pnl14i7km2hynjn4ymchfjr2bwmp45c1ra"; depends=[gplots Luminescence]; };
-  TMB = derive2 { name="TMB"; version="1.7.11"; sha256="1v74iw4pmklhnq5rc0xaahrfd78bgz1fylnwp8gahha72lbcdzrq"; depends=[Matrix RcppEigen]; };
+  TMB = derive2 { name="TMB"; version="1.7.12"; sha256="06gky76x5bc95l22ygnnamgdym7ysnqg42fa213ic9ws2rjv40ni"; depends=[Matrix RcppEigen]; };
   TMDb = derive2 { name="TMDb"; version="1.0"; sha256="0bbcmsv7b3vvskhdjww03gbcgql44vsvyjz2fajy9w2vgkr6ga90"; depends=[httr jsonlite]; };
   TNC = derive2 { name="TNC"; version="0.1.0"; sha256="0639wvylmk9mapvmz79ij65g1phv3ylc683awi4pgaf9yfwlmjkn"; depends=[]; };
   TOC = derive2 { name="TOC"; version="0.0-4"; sha256="1c16d4wrzir6v3c323sck6r9yz6mv1a70xamlj5ha1ydmfixcza9"; depends=[bit raster rgdal]; };
@@ -3639,6 +3720,7 @@ in with self; {
   TRSbook = derive2 { name="TRSbook"; version="1.0.1"; sha256="1w2yl5pchw2vn9l3qnm1ra9mjy946i5xsxh5n5xdvrcj2kak50x5"; depends=[gdata IndependenceTests RColorBrewer xtable]; };
   TSA = derive2 { name="TSA"; version="1.01"; sha256="0cm97hwxm6vfgy9mc3kgwq6dnmn86p8a4avnfjbai048qnwrn6hx"; depends=[leaps locfit mgcv tseries]; };
   TSCS = derive2 { name="TSCS"; version="0.1.1"; sha256="0dllaw69rl26hgqac5q66k13gfmnxhn3wf0j8nx5xvi7yclzc3ay"; depends=[ggplot2 rgl tseries]; };
+  TSEtools = derive2 { name="TSEtools"; version="0.1.0"; sha256="16wrlbgq4xli49hha0bsg4nrv33jy0sd0d6nnzvfiqaqw8jml3rs"; depends=[xts]; };
   TSF = derive2 { name="TSF"; version="0.1.1"; sha256="0v3pq64yknp3n6lw6c87slv1avsv7rlb82gm670q4jzv5d174phv"; depends=[forecast fracdiff]; };
   TSGSIS = derive2 { name="TSGSIS"; version="0.1"; sha256="0zrlin6xi6sv5qb18a0wi8lzldqlwa9lbwnra44w3jza3kakff7n"; depends=[glmnet MASS]; };
   TSHRC = derive2 { name="TSHRC"; version="0.1-5"; sha256="05vv2zdkzlg04dicwa0lyww92fiafr7bnvsbm6990xkip1lf3cih"; depends=[]; };
@@ -3648,7 +3730,7 @@ in with self; {
   TSP = derive2 { name="TSP"; version="1.1-5"; sha256="03xxfr5kk4zhzpb1q1pwncdp0dhchm9b48wzhvvxn2dxf3mnby2w"; depends=[foreach]; };
   TSPostgreSQL = derive2 { name="TSPostgreSQL"; version="2015.4-1"; sha256="11201zpbrva6gwc9hg8pynadrps6d8pb3syzba9nyjpv2ck6x3ry"; depends=[DBI RPostgreSQL tframe tframePlus TSdbi TSsql]; };
   TSPred = derive2 { name="TSPred"; version="3.0.2"; sha256="0cbf5h3yrissng4xqrgbisarml772mg6b2ap508imf29zfks76gn"; depends=[forecast KFAS MuMIn]; };
-  TSS_RESTREND = derive2 { name="TSS.RESTREND"; version="0.1.02"; sha256="1rvxbzhdzjb4f3b4pk53iwv0vpw8s0z8k1fyfpcxvy333f68d59f"; depends=[bfast broom ggplot2 RcppRoll strucchange]; };
+  TSS_RESTREND = derive2 { name="TSS.RESTREND"; version="0.2.13"; sha256="0wbwkhc1b5dql87sj1441cknidpgwcflwlid2yj6d64a6wsipn1l"; depends=[bfast broom ggplot2 RcppRoll strucchange]; };
   TSSQLite = derive2 { name="TSSQLite"; version="2015.4-1"; sha256="10z8s967wmapkb56hh2brb5bafgqr8flwh0sr72yqqv0ca2d06sc"; depends=[DBI RSQLite tframe tframePlus TSdbi TSsql]; };
   TSTr = derive2 { name="TSTr"; version="1.2"; sha256="0nljkqsrwzg7i82arpfrz2k9m1k1akin1akf01c5cadxq4rgarsf"; depends=[data_table stringdist stringr]; };
   TSTutorial = derive2 { name="TSTutorial"; version="1.2.3"; sha256="0hpk6k3lc72p8pdz5aad04lcjsz9k443h5gs09dc3i10wqw3yhxs"; depends=[MASS]; };
@@ -3661,18 +3743,20 @@ in with self; {
   TSfame = derive2 { name="TSfame"; version="2015.4-1"; sha256="197v123mkxr7qlksnb5iadms5zbc8xqbpgr2cspb8x1krz6phssz"; depends=[DBI fame tframe tframePlus tis TSdbi]; };
   TSmisc = derive2 { name="TSmisc"; version="2016.8-1"; sha256="0xvn6qlvvdc65l356r8b5ppddjd35k9fc4b5w5wn3j5wzxfllbk1"; depends=[DBI gdata quantmod tframe tframePlus TSdbi tseries zoo]; };
   TSodbc = derive2 { name="TSodbc"; version="2015.4-1"; sha256="0m6r97gs483jg6jlmfkbzxg3jvf6q140kvpidjccj224zb1sqlcq"; depends=[DBI RODBC tframe tframePlus TSdbi TSsql]; };
+  TSrepr = derive2 { name="TSrepr"; version="1.0.0"; sha256="1r2704zx9mk5w9k98labslp9wqj23jgn28k5jl31lvwcqgj5qqpv"; depends=[dtt MASS mgcv quantreg Rcpp wavelets]; };
   TSsdmx = derive2 { name="TSsdmx"; version="2016.8-1"; sha256="06h1iwgshiq4bvly5l1nrddrh2knc82z2aqxh8ls9ipbs7qjsvaf"; depends=[DBI rJava RJSDMX tframe tframePlus TSdbi]; };
   TSsql = derive2 { name="TSsql"; version="2017.4-1"; sha256="0f71q6gqfx4r3ghsmr572cvkpmf2xf7kipf10ii99z1y23dxmsdn"; depends=[DBI tframe tframePlus TSdbi zoo]; };
+  TSstudio = derive2 { name="TSstudio"; version="0.1.1"; sha256="1myvih5kd9pliczddjscqlq811dswqh9d8an8p5bi12h31w9pp30"; depends=[forecast lubridate magrittr plotly reshape2 xts zoo]; };
   TTAinterfaceTrendAnalysis = derive2 { name="TTAinterfaceTrendAnalysis"; version="1.5.3"; sha256="0a1v0lsfcn32w5rwcjwmvh0rghamwr5a76rx3npa6kv0dymnvhxf"; depends=[e1071 lubridate multcomp mvtnorm nlme pastecs relimp reshape tcltk2 zoo]; };
   TTCA = derive2 { name="TTCA"; version="0.1.1"; sha256="16slr4c2nwbchsg6fk5prq22p2v4cjxzk93wd3xggav2lzrf8a5h"; depends=[MASS Matrix quantreg RISmed tcltk2 VennDiagram]; };
-  TTR = derive2 { name="TTR"; version="0.23-2"; sha256="0djlqwbqqzlnjali8qs00vvd6h0qa8rmcr7csrrxan0x6v9c27qs"; depends=[curl xts zoo]; };
+  TTR = derive2 { name="TTR"; version="0.23-3"; sha256="07r62ngyzjl4aszdxnr3n6bnbcgcap32yhd430jsilicg8n06di1"; depends=[curl xts zoo]; };
   TTS = derive2 { name="TTS"; version="1.0"; sha256="0dhxj474dqjxqg0fc2dcx8p5hrjn9xfkn0rjn2vz3js92fa9ik9h"; depends=[mgcv sfsmisc]; };
   TTmoment = derive2 { name="TTmoment"; version="1.0"; sha256="0a4rdb4fk1mqnvvz0r15kni0g5vcj4xkkcwwv7c2gxc94xh5i5ih"; depends=[mvtnorm]; };
   TUWmodel = derive2 { name="TUWmodel"; version="0.1-8"; sha256="0c00jd2bq4i5fd55hj7l2grkpn990p0kmhbsh95b2zrzhbwgcjp6"; depends=[]; };
   Table1Heatmap = derive2 { name="Table1Heatmap"; version="1.1"; sha256="1nrabjivfsdhaqmlq365pskkrp99jqsxn8vy03mdnqn5h5zv7wvx"; depends=[colorRamps]; };
   TableMonster = derive2 { name="TableMonster"; version="1.2"; sha256="1cl70d0svzx8nsg6kw5dv50s9d6wxqkyg39d2d4vissbpilq6arn"; depends=[xtable]; };
   TableToLongForm = derive2 { name="TableToLongForm"; version="1.3.1"; sha256="135q0bgsm2yndrg3vpwmihbqlyf3qkm97i0jvcw6bf06p6b2fk41"; depends=[]; };
-  TailRank = derive2 { name="TailRank"; version="3.1.3"; sha256="1d1i2i12lg4isyy9d37anpd26v7jp9ph5p82dkv66bhsj8fb0y8m"; depends=[Biobase oompaBase oompaData]; };
+  TailRank = derive2 { name="TailRank"; version="3.2.0"; sha256="15m4wzhngrv8001r2cmq0a4a7j2kk8p061rhnpbqa7mfbfg6jkr5"; depends=[Biobase oompaBase oompaData]; };
   TanB = derive2 { name="TanB"; version="0.1"; sha256="05y9j1a5nzqfpsw48gix5c4ds1cm80liad9wnwmddhbx4fda6p32"; depends=[fdrtool pracma]; };
   TaoTeProgramming = derive2 { name="TaoTeProgramming"; version="1.0"; sha256="1b36s5mpm5vbhzcwmvm8g5pl7vpn6rsl5cnglfy8kgm1q9nnr7ff"; depends=[]; };
   TapeR = derive2 { name="TapeR"; version="0.3.3"; sha256="0q5j7pn05z7hinwl5ypnrgh9ibsw6hvdfszjbnvavzab3bx8l6nn"; depends=[nlme pracma]; };
@@ -3688,16 +3772,15 @@ in with self; {
   TeachingDemos = derive2 { name="TeachingDemos"; version="2.10"; sha256="016pivvy8gzz8f3clnr5dg488rb1lf0l5s00c3v34gm1dgiw5x1f"; depends=[]; };
   TeachingSampling = derive2 { name="TeachingSampling"; version="3.2.2"; sha256="07c1wx7hl246kvj9ah55kdjpag8a9zbzh3jy0680w5nnv8vzsxxs"; depends=[]; };
   TempleMetrics = derive2 { name="TempleMetrics"; version="1.1.0"; sha256="02cs2dgcmxgz1y98x4rpq4l4khqvbnr0248s6rgrgq5l3z2s4qr0"; depends=[BMisc pbapply]; };
-  Ternary = derive2 { name="Ternary"; version="0.1.1"; sha256="0y5ayjqv6prz44gn4j3c94k96vjhglq9qdaxxhwij1cqdf8vgylf"; depends=[]; };
+  Ternary = derive2 { name="Ternary"; version="1.0.0"; sha256="1dqkvddsb0g4bhiqnq22n4lfkxcrwimygai5lsrn1nlijyhcxfn1"; depends=[]; };
   TestDataImputation = derive2 { name="TestDataImputation"; version="1.0"; sha256="07k4sgjda1gwdlx5rap5fhs5rww2ahzyf0fq98dsm99gvjajnmwn"; depends=[Amelia mice]; };
   TestFunctions = derive2 { name="TestFunctions"; version="0.2.0"; sha256="018nkz8r6vqahrzq3d588i3ffb1bmd1pdk87j4ivcdsx99mq15sn"; depends=[]; };
   TestScorer = derive2 { name="TestScorer"; version="1.7.2"; sha256="006c3g3gx55mfr93srldwvgz5vm6nkr3f57yi4qg6krn0d32865f"; depends=[]; };
-  TestSurvRec = derive2 { name="TestSurvRec"; version="1.2.1"; sha256="05f5gc8hvz09hx015jzis6ikki9c1brdq7l7a9bxm9bqbcc9f2f9"; depends=[boot survrec]; };
   TestingSimilarity = derive2 { name="TestingSimilarity"; version="1.0"; sha256="1fagy9168cz09p460pa0qyn8m79zg4i2b9j5vg8gm1ssqi2znsl9"; depends=[alabama DoseFinding lattice]; };
-  TexExamRandomizer = derive2 { name="TexExamRandomizer"; version="1.2.2"; sha256="0v81qhpwm0ir3v6hiv5lrl5ilchj5qw6dhvl35nmzcs2j7idpak6"; depends=[assertthat jsonlite Rcpp stringr]; };
+  TexExamRandomizer = derive2 { name="TexExamRandomizer"; version="1.2.3"; sha256="0l0vpx4rkib2m8hwhwy9j8pqyf7gpb9qg8wpnh3238snwpadgy3a"; depends=[assertthat jsonlite Rcpp stringr]; };
   ThankYouStars = derive2 { name="ThankYouStars"; version="0.2.0"; sha256="0r77ns3102wj1wvrfsa06l427imxyfhigpbs36cdxl2j87qrjzl6"; depends=[httr jsonlite]; };
   ThermIndex = derive2 { name="ThermIndex"; version="0.2.0"; sha256="0s9d55577dq61qixwwfwmqc2k2c8my00j2ng97ng42cw0jc7aylm"; depends=[]; };
-  Thermimage = derive2 { name="Thermimage"; version="3.0.0"; sha256="0l098praarg5kg0m5hxs9zbwhl8w7g48ngyiry1rlwkp2rsl3cza"; depends=[png tiff]; };
+  Thermimage = derive2 { name="Thermimage"; version="3.1.0"; sha256="1gbbmmgmp6a8swl6kdfzf4kj9dpm17m809r2xrc58wg8gslx8m1c"; depends=[png tiff]; };
   Thinknum = derive2 { name="Thinknum"; version="1.3.0"; sha256="0j48vgr4wsc2chm95aprq0xm0dk720xk5zmiijxasg92sfp0va6n"; depends=[RCurl RJSONIO]; };
   ThreeArmedTrials = derive2 { name="ThreeArmedTrials"; version="1.0-0"; sha256="075cn99k06lgdd0cwl1i9242fcxwmd5malcyks0mmwjf9kzw00z2"; depends=[MASS numDeriv]; };
   ThreeGroups = derive2 { name="ThreeGroups"; version="0.21"; sha256="0hipxa45v9ysb2qbk33kjycnvqar7bff1ajxd6fzhpc3jc9hflw4"; depends=[]; };
@@ -3710,45 +3793,48 @@ in with self; {
   TideTables = derive2 { name="TideTables"; version="0.0.2"; sha256="1grm9s9np7xs2d8gql4sgg72rxpxiidw6g1ni8q97qgqr7r3105l"; depends=[chron data_table]; };
   Tides = derive2 { name="Tides"; version="2.0"; sha256="0s7ja0vs8ag7myjq4kmza4ja9p76sdbbkaaamxbsgp9yaf02c6nf"; depends=[]; };
   TileManager = derive2 { name="TileManager"; version="0.2.0"; sha256="1zk5q1m3imlr9ms81jyb9kibm0m5zmiidsv86qgnqj8r4b8hpqyh"; depends=[APfun raster rgeos sp]; };
-  TilePlot = derive2 { name="TilePlot"; version="1.3.1"; sha256="0yfzjyzc743rv5piw9mb7y0rr558hkxszgz49lya2w3i1mqvxbzy"; depends=[]; };
   TimeMachine = derive2 { name="TimeMachine"; version="1.2"; sha256="1dz0j777wmd8mpkm2ryiahpcw6w88w429zjcw6m67pi20r1992cb"; depends=[]; };
   TimeProjection = derive2 { name="TimeProjection"; version="0.2.0"; sha256="04yr4cg2khkw9n3y3qk0ni1327k4pxm09zz2xg8mpjdvgi4p9yi3"; depends=[lubridate Matrix timeDate]; };
+  TimeSeries_OBeu = derive2 { name="TimeSeries.OBeu"; version="1.2.2"; sha256="1a44fb29yacwgdiwaf5fpxzc5222cpi5mkv7l0dh43b6lh8f0j5k"; depends=[forecast jsonlite locfit trend tseries]; };
+  TimeVTree = derive2 { name="TimeVTree"; version="0.2.1"; sha256="0657y6s4w83yda36q1isr3zwd8vv9wminljdpivs8c89p0cwm3yb"; depends=[survival]; };
   TimeWarp = derive2 { name="TimeWarp"; version="1.0.15"; sha256="1v6f6d1h9dc8npdy0ph5hhc4jjkzh8kac48lz4ahgngi9n0xwql9"; depends=[]; };
   Tinflex = derive2 { name="Tinflex"; version="1.2"; sha256="0rx4aj0bxiaaap3f43jzf3rlmrjp0g8aplg1ybccdyahx4p727bn"; depends=[]; };
-  TipDatingBeast = derive2 { name="TipDatingBeast"; version="1.0-6"; sha256="07880h9q14m2pscm132zx91ps07sya9jwfcmsmhy8rjkdw5zjnik"; depends=[DescTools mclust TeachingDemos]; };
+  TipDatingBeast = derive2 { name="TipDatingBeast"; version="1.0-7"; sha256="1lc63xghjny45nkrppf06lxvhbqnw9w5i06bmncm90hm0kam092b"; depends=[DescTools mclust TeachingDemos]; };
   TippingPoint = derive2 { name="TippingPoint"; version="1.1.0"; sha256="1f5bfag892yk47r1pw2rlvqz9qnkaz8radprpxh0q0knviw3f9fp"; depends=[bayesSurv ggplot2 RColorBrewer reshape2]; };
   Tlasso = derive2 { name="Tlasso"; version="1.0.1"; sha256="0flx4l7q3qndp77349ayfrszyim7mvs7yfvv3j9a1mhf3gdn9j14"; depends=[expm huge igraph rTensor]; };
   Tmisc = derive2 { name="Tmisc"; version="0.1.17"; sha256="11i807ma7mhx9ba675ifs42b5gr2dgr2z2zx35ga0jav464n9vk0"; depends=[audio dplyr rstudioapi tibble]; };
   Tnseq = derive2 { name="Tnseq"; version="0.1.2"; sha256="1n76yzk15p8i5bp3k6fszmdqk2d791r4sb8hg5hb61zb92r7wqlj"; depends=[Biobase Ckmeans_1d_dp DESeq edgeR limma]; };
   ToolsForCoDa = derive2 { name="ToolsForCoDa"; version="1.0.2"; sha256="0x05phwm6gqw1pmars1ypg86sggflffw9g2d0lc5gfsy93nrg0rv"; depends=[calibrate HardyWeinberg MASS]; };
   TopKLists = derive2 { name="TopKLists"; version="1.0.6"; sha256="1hmm9g68scq8sqdb9axqn51p00mx6p6lw0fdgjljfi2q72xcqhq3"; depends=[gplots Hmisc]; };
-  TotalCopheneticIndex = derive2 { name="TotalCopheneticIndex"; version="0.1"; sha256="1477zp8jzq1p22q8484vkrdx5nxwq4i44mxg4zhj9fixiw4shpx9"; depends=[ape]; };
-  TraMineR = derive2 { name="TraMineR"; version="2.0-7"; sha256="0skc52da2l137zx015yx28bw43z4snl01ahm7d0x1gnp3ps7lvr9"; depends=[boot cluster Hmisc RColorBrewer]; };
-  TraMineRextras = derive2 { name="TraMineRextras"; version="0.4.1"; sha256="11vr9f0l4bg4cga5wfflrmq3zhs1hdwmv18xxgni194g642h7k8b"; depends=[cluster RColorBrewer survival TraMineR]; };
+  TotalCopheneticIndex = derive2 { name="TotalCopheneticIndex"; version="1.0.0"; sha256="1w8irl49cxg0rsbk57cl443gmy4i3vrh3ialx9c9d08wc7d2zisa"; depends=[]; };
+  TraMineR = derive2 { name="TraMineR"; version="2.0-8"; sha256="0x4ppghg7rbsj7q4q274vcs6kcwajjbi0s181r5qmzbxf20l8k9r"; depends=[boot cluster Hmisc RColorBrewer]; };
+  TraMineRextras = derive2 { name="TraMineRextras"; version="0.4.2"; sha256="1k2s3syx27vma5k0qcfx2579jyaxmx7crizkvz3wplhzdwag7wbk"; depends=[cluster RColorBrewer survival TraMineR]; };
   TrackReconstruction = derive2 { name="TrackReconstruction"; version="1.1"; sha256="1f2l3nshb6qrhyczw5rxqqzmsjxf0rvv3y78j8d9lv1nnd9kxzq5"; depends=[fields RColorBrewer]; };
   Trading = derive2 { name="Trading"; version="1.1"; sha256="1mzqck9n14xp16vflx1sx8lry0wjmx37hqv76ldj21xnk5zbrgil"; depends=[]; };
   Traitspace = derive2 { name="Traitspace"; version="1.1"; sha256="1wlrpnzb39vgkqy0ynbwlgrkkqgklrk6pw7f8p7p2i132qk2c291"; depends=[mclust permute]; };
-  TrajDataMining = derive2 { name="TrajDataMining"; version="0.1.4"; sha256="0lm5ikdl95vr5xdm082n59pznmdx5jd5cxfy1f9r85smhdhw05yk"; depends=[geosphere ggplot2 magrittr rgdal RPostgreSQL sp spacetime trajectories xts]; };
+  TrajDataMining = derive2 { name="TrajDataMining"; version="0.1.5"; sha256="0zdni9zqz3yy5ac2xfn3x2ad2lsmm7aw67nshv2sis828f9bsj9x"; depends=[geosphere ggplot2 magrittr rgdal rgeos RPostgreSQL sp spacetime trajectories xts]; };
   TransModel = derive2 { name="TransModel"; version="2.1"; sha256="0brlr4w5k8xsgbrizm7ha0cmq0kqzd2fcjpszq7gym844jj93csi"; depends=[MASS survival]; };
   TransP = derive2 { name="TransP"; version="0.1"; sha256="0p6pfcp8qjdah0lfhx0a396nxjzp3ckpda9hl3snpppx79iyww55"; depends=[]; };
   TransferEntropy = derive2 { name="TransferEntropy"; version="1.4"; sha256="0620axdj6qyskf7xszrs8j5d2l73ns4bgbdg03fvr8i7jmq70zb8"; depends=[BH Rcpp]; };
   TreatmentSelection = derive2 { name="TreatmentSelection"; version="2.1.1"; sha256="1pw64hx697jg2f1r2zd8y98g3ivj2gm8fnixcjfn4drsd0xixb4p"; depends=[binom ggplot2 survival]; };
-  TreeBUGS = derive2 { name="TreeBUGS"; version="1.1.1"; sha256="1zhxmmks263khrdckp570j6lykfhhlpc6rnhw3rk35a9k89yp90v"; depends=[coda hypergeo MASS Rcpp RcppArmadillo rjags runjags]; };
+  TreeBUGS = derive2 { name="TreeBUGS"; version="1.3.0"; sha256="0k1z3c5vlgwwkalf2a35q6qqxg9nhkj9101jiqq408dlkahcl32f"; depends=[coda hypergeo logspline MASS Rcpp RcppArmadillo rjags runjags]; };
   TreePar = derive2 { name="TreePar"; version="3.3"; sha256="1sm518b1b4b1p0n5979qzvi2nacxpp3znbg9n75pf2a8z8wy6p4l"; depends=[ape deSolve Matrix subplex TreeSim]; };
   TreeSearch = derive2 { name="TreeSearch"; version="0.0.6"; sha256="1v8mczvh2m5mrmhsgpajhmb7bmlplyraa2q08w6nz6fs5g9zg01c"; depends=[ape phangorn]; };
   TreeSim = derive2 { name="TreeSim"; version="2.3"; sha256="1y98m2whpx9kssgklw2d6prs6af9vcn8yva1l7lm1l509py1fn6h"; depends=[ape geiger]; };
   TreeSimGM = derive2 { name="TreeSimGM"; version="2.3"; sha256="0qwqvmmdn290llz5hmmx2q24jjmd1bxssrslzv31kzi1yq5h6w0b"; depends=[ape TreeSim]; };
   TrendInTrend = derive2 { name="TrendInTrend"; version="1.0.2"; sha256="0ymlgalddnfnb55s31bysm68yh823ys0rr5fgiic4a2ipnbfd8qf"; depends=[pROC rms]; };
-  TriMatch = derive2 { name="TriMatch"; version="0.9.7"; sha256="06idgh9bwwbwa16hlc2kgm06n9shzm0825f7k65zpz3isq23dp7q"; depends=[ez ggplot2 gridExtra PSAgraphics psych reshape2 scales]; };
+  TriMatch = derive2 { name="TriMatch"; version="0.9.9"; sha256="17v8hdm594i9qs5hvrzb1k94wrzvx07479rmvbk4314fim27mabg"; depends=[ez ggplot2 gridExtra PSAgraphics psych randomForest reshape2 scales]; };
   TriadSim = derive2 { name="TriadSim"; version="0.1.1"; sha256="0m14k512b7q09zx51v2kxa8q9pk2i179w6ckl6jxj2acc860xw3k"; depends=[doParallel foreach snpStats]; };
   TrialSize = derive2 { name="TrialSize"; version="1.3"; sha256="1hikhw2l7d3c7cg4p7zzrgdwhy9g4rv06znpw5mc6kwinyakp75q"; depends=[]; };
+  TrioSGL = derive2 { name="TrioSGL"; version="1.1.0"; sha256="0xzyv1vppw0v1xjpf83nnv1sx1xy7197ay6l7dzvr0vllappdam9"; depends=[]; };
   TripleR = derive2 { name="TripleR"; version="1.5.3"; sha256="13s1vlmr4sqa2sq2fbcld86bh3g73yb204aawbks11rjblwzvb0h"; depends=[ggplot2 plyr reshape2]; };
-  TropFishR = derive2 { name="TropFishR"; version="1.1.4"; sha256="120w48rjszcs9c59vi4my98jdbg08s9lld93j38g7a6gnkv2hg8s"; depends=[beepr doParallel GA GenSA MASS msm propagate reshape2]; };
+  TropFishR = derive2 { name="TropFishR"; version="1.2.1"; sha256="17c7v85srx2l5chlz4yj8x6qrnlp9vvm11qkag73ma2x2a365sgn"; depends=[doParallel GA GenSA MASS msm propagate reshape2]; };
   TruncatedNormal = derive2 { name="TruncatedNormal"; version="1.0"; sha256="1qj18xcq58xah1niwxgqqzscl7dfgxh2s8fdbzk1vigwwm5xfvij"; depends=[randtoolbox]; };
   Tsphere = derive2 { name="Tsphere"; version="1.0"; sha256="0xgxw2hfj40k5s0b54dcmz7savl8wy4midmmgc7lq4pyb8vd58xx"; depends=[glasso rms]; };
-  TukeyC = derive2 { name="TukeyC"; version="1.1-5"; sha256="08s9scsd2l6wavc7qqlffjbf89vkd6xpb4iawvbqf7jh8jiyvw17"; depends=[]; };
+  TukeyC = derive2 { name="TukeyC"; version="1.3-0"; sha256="1rkd20m9f97n88zlyidipqs6nd6hldw8s4bxiwvrj1ba2lbg09p3"; depends=[doBy]; };
+  TukeyRegion = derive2 { name="TukeyRegion"; version="0.1.2"; sha256="03lik9vkah3hjhn0l4ci95v2h4q8mnziq006idipn69l4gmnddxl"; depends=[bfp BH ddalpha MASS Rcpp rgl Rglpk]; };
   TunePareto = derive2 { name="TunePareto"; version="2.4"; sha256="0pljl3q5s9yqc4ph70y66ff9ci9w8gwj8jsy8srxqkgqvahc8arf"; depends=[]; };
-  TurtleGraphics = derive2 { name="TurtleGraphics"; version="1.0-7"; sha256="17hbp58pdjngwx269n65sd5w7r2s4ygzd0yyxal3qwmwshbvcw96"; depends=[]; };
+  TurtleGraphics = derive2 { name="TurtleGraphics"; version="1.0-8"; sha256="0h77pj7rs3lrqi1y2dm1cbrmj13mjpq6y5nw8bcq0s2kbnkfw67l"; depends=[]; };
   TwoCop = derive2 { name="TwoCop"; version="1.0"; sha256="1ycxq8vbp68z82r2dfg2wkc9zk3bn33d94xay20g2p55lnzl2ifd"; depends=[]; };
   TwoPhaseInd = derive2 { name="TwoPhaseInd"; version="1.1.1"; sha256="0xsqiq4x7vmhif9j8zi1smbchwm4fsbgb10i4vxi0biijybizk9z"; depends=[survival]; };
   TwoStepCLogit = derive2 { name="TwoStepCLogit"; version="1.2.5"; sha256="050y7na91izg36gkwd8yn8rx3r39dk6qlvhd3137f3jnk4v00bck"; depends=[survival]; };
@@ -3769,17 +3855,19 @@ in with self; {
   UWHAM = derive2 { name="UWHAM"; version="1.0"; sha256="1qaj8anaxqnx4nc6vvzda9hhhzqk9qp8q7bxm26qgia4hgascnrv"; depends=[trust]; };
   UdderQuarterInfectionData = derive2 { name="UdderQuarterInfectionData"; version="1.0.0"; sha256="084bq5ai1ccp4www64z0ipic74zkd8j1ygv0py900164a25wdr9b"; depends=[]; };
   Ultimixt = derive2 { name="Ultimixt"; version="2.1"; sha256="0fh2qpm7qpv1170jzbmzqhvwsn69lblizzisgasswy2nix2jjz4y"; depends=[coda gtools]; };
+  Umatrix = derive2 { name="Umatrix"; version="3.1"; sha256="131j7yrb0yzffl6gvirdj29zmsbwg8163i15gg9f0clfcrl1kcx6"; depends=[abind AdaptGauss deldir fields geometry ggplot2 pdist plyr png Rcpp reshape2 shiny shinyjs]; };
   Umpire = derive2 { name="Umpire"; version="1.3.4"; sha256="0kxndg96ah6sk1m216f2dmkg73w10lyg3rv7qsrnn145mznsdlw1"; depends=[]; };
   UncerIn2 = derive2 { name="UncerIn2"; version="2.0"; sha256="08cg7armz9xwwn1222aws98cwrvmw0s73pxpnszmrmrli1qs92k1"; depends=[automap fields geoR gstat RandomFields Rcpp sp]; };
   UncertainInterval = derive2 { name="UncertainInterval"; version="0.3.0"; sha256="09x52g691qqsphy2sppm3852gak0ammsan4x306vd16yz9z0zlb2"; depends=[nloptr reshape2 rootSolve]; };
+  UniDOE = derive2 { name="UniDOE"; version="1.0.1"; sha256="1hjraksvxvxz4xbrq97x6xf3r0f90c484ix92zapylyxvkifx628"; depends=[Rcpp]; };
   UniIsoRegression = derive2 { name="UniIsoRegression"; version="0.0-0"; sha256="0lmrmb9sbk41ak7sbcrzhfnijb1skgb4lqg9m9imc98lcp69h7z0"; depends=[Rcpp]; };
   Unicode = derive2 { name="Unicode"; version="10.0.0-1"; sha256="1kj4b29gj3p0wzlzxqn7lwzabair6np705va0nxissfybpmwalgk"; depends=[]; };
-  UnivRNG = derive2 { name="UnivRNG"; version="1.0"; sha256="1d55a103q30vhyjq659a6bbnqbm4g4calr5j4xw8p0h0x5i4p5xh"; depends=[]; };
+  UnivRNG = derive2 { name="UnivRNG"; version="1.1"; sha256="0vjsqc1y24z7zlclglh55kkxjhy0dc5gjsy427zdv95j58jbxa66"; depends=[]; };
   UpSetR = derive2 { name="UpSetR"; version="1.3.3"; sha256="08vj7l92b8fpqyqwxshll2mhk3yhgyr74axvr2lf29z78bapymhz"; depends=[ggplot2 gridExtra plyr scales]; };
   UsingR = derive2 { name="UsingR"; version="2.0-5"; sha256="1w1swcb5srb2b76agbh3mipz8b3vbhpnhxfhg7k546y38j3crafq"; depends=[HistData Hmisc MASS]; };
   V8 = derive2 { name="V8"; version="1.5"; sha256="155389k8laa48akg0bfsz65s4ddmpk0xpi1ha56z1sayv01vrrgc"; depends=[curl jsonlite Rcpp]; };
   VAR_etp = derive2 { name="VAR.etp"; version="0.7"; sha256="0py5my3ilhcmz44m15hh0d219l9cz7rda4a9gbmf8wh9cgvvj1s3"; depends=[]; };
-  VARSEDIG = derive2 { name="VARSEDIG"; version="1.4"; sha256="1g0qpa21gkp2s0sr336bkdqfrcxygrdl77i3lv09vqimyinbi0p2"; depends=[]; };
+  VARSEDIG = derive2 { name="VARSEDIG"; version="1.5"; sha256="07zc1k3h9bh0vlqmxqgpniq8ccsfv99bp18h9x9gjl24dppc0xz7"; depends=[]; };
   VARsignR = derive2 { name="VARsignR"; version="0.1.3"; sha256="09mnf9hvsi4wx1c81yq97mzggwk6s7nka7awrws63icjybqjmra9"; depends=[HI minqa mvnfast]; };
   VARtests = derive2 { name="VARtests"; version="1.0.1"; sha256="19xmf4mg4v1fwd002ccinfbsbpcq9qfmzc2sf710mqv6i8ghv6jm"; depends=[Rcpp RcppArmadillo sn]; };
   VBLPCM = derive2 { name="VBLPCM"; version="2.4.4"; sha256="09b80313w2dljl009xzcfhdcl6flc8nqzw9pzgfbciwi61666ppb"; depends=[ergm mclust network sna]; };
@@ -3788,7 +3876,7 @@ in with self; {
   VDA = derive2 { name="VDA"; version="1.3"; sha256="063mpwbyykx4f46wzfvrgnlq73ar7i06gxr4mjzbhqcfrsybi72b"; depends=[rgl]; };
   VDAP = derive2 { name="VDAP"; version="2.0.0"; sha256="134x4aisaim72xkyzb1vb8vhl2m4i12yzh6cj858a1ag7b0ing3n"; depends=[drc ggplot2 reshape2 stringr]; };
   VDSPCalibration = derive2 { name="VDSPCalibration"; version="1.0"; sha256="1hrmmhvk3mhd3bdl0msnm5shcj4cjgd3pn1rkfkv8fh4llqvz7w8"; depends=[]; };
-  VGAM = derive2 { name="VGAM"; version="1.0-4"; sha256="0r59hyp3afmvms890b3v2yyckf8v0qkjf2w11rnqd2zgg1gri0g5"; depends=[]; };
+  VGAM = derive2 { name="VGAM"; version="1.0-5"; sha256="0ik3wyv6jj54bg34z0fzzk4xg0h6x98jqx4q2r7g1f0in0qgbb01"; depends=[]; };
   VGAMdata = derive2 { name="VGAMdata"; version="1.0-3"; sha256="1jicadjaqmys1bbgkp64hmm8wwmi6f734il00v8qjz3jl9b02pkn"; depends=[]; };
   VHDClassification = derive2 { name="VHDClassification"; version="0.3"; sha256="1ij4h3gzxb9mm9q743kc3sg2q609mnqz6mhlrbim1wcjji2b7bv4"; depends=[e1071 lattice]; };
   VIF = derive2 { name="VIF"; version="1.0"; sha256="0yvg6ikrcs7mhg0pavhcywrfysv7ylvnhxpc5sam86dbp69flx9x"; depends=[]; };
@@ -3798,12 +3886,12 @@ in with self; {
   VIMGUI = derive2 { name="VIMGUI"; version="0.10.0"; sha256="14na9ss0vkcys979kdcciynwssqsvy2w566nydgzd3n7gcmx2agm"; depends=[Cairo foreign gWidgets gWidgetsRGtk2 Hmisc RGtk2 survey tkrplot VIM]; };
   VLF = derive2 { name="VLF"; version="1.0"; sha256="1il8zhm80mc22zj16dpsy4s6s9arj21l9ik0vccyrpnlr8ws3d3l"; depends=[]; };
   VLMC = derive2 { name="VLMC"; version="1.4-1"; sha256="0y91cl9pv1d5s8956grdx3y4xa5l1fabrh1wl5hn11fjgyz1dcij"; depends=[MASS]; };
-  VNM = derive2 { name="VNM"; version="5.1"; sha256="132m23np3qk4cf2fnsjg0ykcifqs20psavybmzs5b86qp9m77h9h"; depends=[Rcpp]; };
+  VNM = derive2 { name="VNM"; version="6.1"; sha256="195fcgs6rzpji250j5kikim4k2rfg1gqgz65f2vgfbmz76wi4za6"; depends=[Rcpp]; };
   VRPM = derive2 { name="VRPM"; version="1.2"; sha256="1cai5a71vzkx0d7cwzsxbcz7r9cdkqjk4l4bp2ffj5pp7nrlh15r"; depends=[fields ggplot2 Hmisc kernlab R2HTML ROCR shiny survival viridis]; };
   VSE = derive2 { name="VSE"; version="0.99"; sha256="07m5080nw72b77238v2wwdh4dxsvv6y78d4j1329n90wyj2crxl4"; depends=[car GenomicRanges igraph IRanges]; };
   VSURF = derive2 { name="VSURF"; version="1.0.3"; sha256="0fgy1qk1jkrnil4cirkp2lj21xjwbpgjgxqrsjs321s69rw2dy1j"; depends=[doParallel foreach randomForest rpart]; };
   VTrack = derive2 { name="VTrack"; version="1.11"; sha256="1w8zp7l60mwzppg3gqq0zv5a065y0vdrp2v0x0yl4a8jq0zlvppx"; depends=[doParallel foreach plotKML sp spacetime]; };
-  VWPre = derive2 { name="VWPre"; version="1.0.0"; sha256="1gxi26wga15xw2zcdmhii0cw6q6iz8nsbzmyd4x7aa14ab5zpv3l"; depends=[dplyr ggplot2 mgcv rlang shiny tidyr]; };
+  VWPre = derive2 { name="VWPre"; version="1.0.1"; sha256="1q6i1ijw9sx5k9k1gpmhsm99hwgsj6kjkak3lnq7458563vd640m"; depends=[dplyr ggplot2 mgcv rlang shiny tidyr]; };
   VaRES = derive2 { name="VaRES"; version="1.0"; sha256="0gw05jiqgirhz3c8skbb07y4h44r6vi68gnd5y7ql455v0c2raza"; depends=[]; };
   VarED = derive2 { name="VarED"; version="1.0.0"; sha256="16j9p2a143y4hqclsv1mig0fccrzjx2r0lll0wz8isjp9x1wzjv8"; depends=[]; };
   VarReg = derive2 { name="VarReg"; version="1.0.1"; sha256="00ygs9gk2719fnhb47z1pj7qacapzg9qs1li2206vsfrmqxjvj1a"; depends=[sn survival]; };
@@ -3820,11 +3908,11 @@ in with self; {
   VennDiagram = derive2 { name="VennDiagram"; version="1.6.18"; sha256="05vhsk5ylspa6b919gk9v4rbwm9sc4lsfq0wz308a8dilkg8cqpa"; depends=[futile_logger]; };
   VertexSimilarity = derive2 { name="VertexSimilarity"; version="0.1"; sha256="0f638y272dbmz5747wxqy9pxasxk3a9f9wf31gf297qx7268ab1m"; depends=[igraph]; };
   VertexSort = derive2 { name="VertexSort"; version="0.1-1"; sha256="0n9m5l85ylin6756rsksak94nv0626qd7czhhj6plz4nfrr27sgl"; depends=[igraph snowfall]; };
-  VeryLargeIntegers = derive2 { name="VeryLargeIntegers"; version="0.1.4"; sha256="10pscsii040avb98zqcd0x3camhfgf2r549b2f8asgqaksypx976"; depends=[Rcpp]; };
+  VeryLargeIntegers = derive2 { name="VeryLargeIntegers"; version="0.1.5"; sha256="18v5llajhfp9nrmyzg6n2mgm7vbjk698m4y55x9xrq29hkb4mhad"; depends=[Rcpp]; };
   VetResearchLMM = derive2 { name="VetResearchLMM"; version="0.2.0"; sha256="1vx72pn3fl27mjsa48kz5j1sj1bkjq8q0ifs5dxdfrcdswfqhjcw"; depends=[ggplot2 lme4 lmerTest multcomp nlme]; };
   ViSiElse = derive2 { name="ViSiElse"; version="1.2.0"; sha256="0k5hhzyjws0haawx2r2c0rxjbjdfx821x0jmj88786q6x67x86n0"; depends=[chron colorspace Matrix stringr]; };
   VideoComparison = derive2 { name="VideoComparison"; version="0.15"; sha256="0592fz0v4xvq1qy2hj4ph90v7zn1cnzr6a094mp9p1k61ki3fbg2"; depends=[pracma Rcpp RCurl RJSONIO zoo]; };
-  VineCopula = derive2 { name="VineCopula"; version="2.1.3"; sha256="1v15fq4wgqcxwkqzk1wyfsmlrslshlp0faxmnfajis7a59cwlwgp"; depends=[ADGofTest copula doParallel foreach kdecopula lattice MASS mvtnorm network]; };
+  VineCopula = derive2 { name="VineCopula"; version="2.1.4"; sha256="1mzxq3ci4z24z8d5w9x1n0d5h7ck7wbcx9y38vlaryyi5ipbhadh"; depends=[ADGofTest copula doParallel foreach kdecopula lattice MASS mvtnorm network]; };
   VisuClust = derive2 { name="VisuClust"; version="1.2"; sha256="0hnjmrz352950rzky88q4nwvkx7zp6x3lsm7kff5dl4w05iq4wsl"; depends=[aplpack]; };
   VizOR = derive2 { name="VizOR"; version="0.8-5"; sha256="1v76m67xdlg06w3dmp27mh3mv3lfqy6bd1iq907dynp2g4qf4ww0"; depends=[lattice rms]; };
   Voss = derive2 { name="Voss"; version="0.1-4"; sha256="056izh1j26vqjhjh01fr7nwiz1l6vwr5z4fll87w99nc5wc4a467"; depends=[fields]; };
@@ -3832,22 +3920,23 @@ in with self; {
   W2CWM2C = derive2 { name="W2CWM2C"; version="2.0"; sha256="139rbbhshiap3iq4s4n84sip3cwwjn2x7lm7kmzwj5glhl5dc6ga"; depends=[colorspace wavemulcor waveslim]; };
   W3CMarkupValidator = derive2 { name="W3CMarkupValidator"; version="0.1-6"; sha256="0nfay5nqss3zlw4nikj8h3zzlnjfxjch4pm3qky15qrcigrybrbl"; depends=[curl xml2]; };
   WACS = derive2 { name="WACS"; version="1.0"; sha256="1x6vn7xhrnaggrxkvap6si8gz7b6z2zpjpbb9zgag4vyq3s7nxgy"; depends=[mclust mnormt mvtnorm tmvtnorm]; };
-  WARN = derive2 { name="WARN"; version="1.2-2"; sha256="1kp0p9ax6k4y990j95q70dhd1r37hjw3i583c2f6ds8gpddqdi3v"; depends=[MASS]; };
+  WARN = derive2 { name="WARN"; version="1.2-3"; sha256="0vkp70cc3slz9y8qfybrqyjyglsxz9fnqrid735h2a113h4xvr3v"; depends=[MASS]; };
   WCE = derive2 { name="WCE"; version="1.0"; sha256="1kb1z67ymnz8cgwxq6m5fpqgxmmrfiwh2q3x4rhanac2sinagyn4"; depends=[plyr survival]; };
   WCQ = derive2 { name="WCQ"; version="0.2"; sha256="1yhkr2iazd7lh9r68xz1lh32z6r1sdnmqrjshcrm4rbwai0j3lkr"; depends=[]; };
   WDI = derive2 { name="WDI"; version="2.4"; sha256="0ih6d9znq6b2prb4nvq5ypyjv1kpi1vylm3zvmkdjvx95z1qsinf"; depends=[RJSONIO]; };
   WEE = derive2 { name="WEE"; version="1.0"; sha256="0i3h67p72lr708mwdw3rbzr1lqqr8n2dxv7f0bwyqzxv41sx1iz3"; depends=[doParallel foreach quantreg]; };
-  WGCNA = derive2 { name="WGCNA"; version="1.61"; sha256="1vrc2k33a196hrrl7k0z534fp96vv0shmigcr65ny1q0v6lq0h6i"; depends=[AnnotationDbi doParallel dynamicTreeCut fastcluster foreach GO_db Hmisc impute matrixStats preprocessCore Rcpp robust survival]; };
+  WGCNA = derive2 { name="WGCNA"; version="1.62"; sha256="0c52rp09gqphz6g5x9jzkdcsyvfrknq0dkq9saslgy8q8ap974vx"; depends=[AnnotationDbi doParallel dynamicTreeCut fastcluster foreach GO_db Hmisc impute matrixStats preprocessCore Rcpp robust survival]; };
   WHO = derive2 { name="WHO"; version="0.2"; sha256="0rpk7ddpkjcqs0m7cgxs55k178js0d70ccfximp2vqrsw0igkmk9"; depends=[dplyr httr]; };
   WLreg = derive2 { name="WLreg"; version="1.0.0"; sha256="0paghjcshhrr6y1gm98d6gr78zvgzhl678g9f96hppfa4q3lfpr7"; depends=[inline survival]; };
   WMCapacity = derive2 { name="WMCapacity"; version="0.9.6.7"; sha256="167wx759xi7rv74n6sdsdkjnfpxdsiybk4ik70psdgfwdqqcga1y"; depends=[cairoDevice coda gtools gWidgets gWidgetsRGtk2 RGtk2 XML]; };
   WMDB = derive2 { name="WMDB"; version="1.0"; sha256="10wdjy3g2qg975yf1dhy09w9b8rs3w6iszhbzqx9igfqvi8isrr1"; depends=[]; };
+  WMWssp = derive2 { name="WMWssp"; version="0.3.2"; sha256="019fcmf5zmbm20zyvx96nwp66lqm2xw7hbpacfwn8cvw3dq85chr"; depends=[rankFD]; };
   WPC = derive2 { name="WPC"; version="1.0"; sha256="0li502hwa4n945yfnilslyvl12ls66kazbfmxb4kkjbaf500mjp9"; depends=[msm survival]; };
   WPKDE = derive2 { name="WPKDE"; version="0.1"; sha256="100vla11fbw16x5n4w4kbslz4n725v4x6j0hrxzrk99ryl0crmf6"; depends=[]; };
   WRS2 = derive2 { name="WRS2"; version="0.9-2"; sha256="0szjq9ffckjqa128avs4cymqvxk7dhldzj620kcq7q59aagrnj04"; depends=[MASS mc2d plyr reshape]; };
-  WRSS = derive2 { name="WRSS"; version="1.0"; sha256="0v0ar1vylf6nz3k9yq867ych2zbx9q51q9w2i6i776davdgya887"; depends=[Hmisc]; };
+  WRSS = derive2 { name="WRSS"; version="1.1"; sha256="1iv6msack3ha2i8l4c7p9964b9f3c2qza1yxjsyx9sn1wzfxs6fj"; depends=[Hmisc]; };
   WRTDStidal = derive2 { name="WRTDStidal"; version="1.1.0"; sha256="0yyhls0qzwwj4sz5d1nvzfiacx28dmf2hgjc7xgfi2qjkckg40hs"; depends=[caret dplyr EnvStats fields foreach forecast ggplot2 gridExtra lubridate purrr quantreg RColorBrewer survival tidyr]; };
-  WVPlots = derive2 { name="WVPlots"; version="0.2.7"; sha256="1nca5zbn5ipwqpxxrzgnx588rs7xz3l3zk50v8ss0s90fvnggfjq"; depends=[cdata ggplot2 gridExtra mgcv plotly replyr seplyr sigr wrapr]; };
+  WVPlots = derive2 { name="WVPlots"; version="0.2.8"; sha256="1d9016k05s3v3gmxsig6xk87npmgni9mfyqcwcvd522zisfx2g6z"; depends=[cdata ggplot2 gridExtra mgcv plotly replyr seplyr sigr wrapr]; };
   WWGbook = derive2 { name="WWGbook"; version="1.0.1"; sha256="0q8lnd1fp4rmz715x0lf61py3xw8wg55yq3gvswaqwy68dlqrzjc"; depends=[]; };
   WWR = derive2 { name="WWR"; version="1.2.2"; sha256="0ia1dd12r1l08s9nhgvk55jmqwv58jawm25gd2ni6wpa3mcmq02g"; depends=[inline]; };
   WaterML = derive2 { name="WaterML"; version="1.7.1"; sha256="0aqcanq2l3m9w1kglmkbqshs80wx9inmjp0c1i2j901g4k35ss5j"; depends=[httr RJSONIO XML]; };
@@ -3858,13 +3947,11 @@ in with self; {
   WaveletComp = derive2 { name="WaveletComp"; version="1.0"; sha256="16ghxqjbv39pmgd52im6ilkkh0hpnaw8ns0hwkngpbr479m1grdp"; depends=[]; };
   WaverR = derive2 { name="WaverR"; version="1.0"; sha256="084fhzggzm075w6wp2lqd3j0an21idhw8z5l8ynz4y96mpmn204a"; depends=[kimisc MASS]; };
   WebGestaltR = derive2 { name="WebGestaltR"; version="0.1.1"; sha256="0cdpfwp4whx8pff73acxga072lwbibl44hxdjs9jsb5i21h55vbr"; depends=[data_table doParallel foreach pkgmaker PythonInR rjson]; };
-  WeightIt = derive2 { name="WeightIt"; version="0.2.0"; sha256="0v0pjp5br8klrf8gafzj7p35wd3cpxw6g46yhl1k9mhlfh9h8s2y"; depends=[cobalt]; };
   Weighted_Desc_Stat = derive2 { name="Weighted.Desc.Stat"; version="1.0"; sha256="030i12mnwlj976avvk3grrccgprsckmc35dm2ajwdfc9dijhypnj"; depends=[]; };
   WeightedCluster = derive2 { name="WeightedCluster"; version="1.2-1"; sha256="04gsr65mssv4cz4v8sh44qhyzn0isll057d45z4ljv6sx0an5yhl"; depends=[cluster RColorBrewer TraMineR]; };
   WeightedPortTest = derive2 { name="WeightedPortTest"; version="1.0"; sha256="007v3w9ssiv2sds7sikpal27g6pxwxhs7bvcyw6kr0vg8gvlbi8h"; depends=[]; };
-  WeightedROC = derive2 { name="WeightedROC"; version="2017.07.12"; sha256="1s9ic2nv4xd3j9xhan46fv9a14n70v0skw9q70rix6kaydi6cjf9"; depends=[]; };
   WhatIf = derive2 { name="WhatIf"; version="1.5-9"; sha256="0ihpp3wbhpsg00g0s31l0ca4q0a2sch2a2j8cgz14g8na43x8831"; depends=[lpSolve pbmcapply Zelig]; };
-  WhiteStripe = derive2 { name="WhiteStripe"; version="2.2.2"; sha256="0jaxy5a4m4ir25assi2dsdgfcm88lbgjdghsh36v7zvhblrfcfap"; depends=[mgcv oro_nifti]; };
+  WhiteStripe = derive2 { name="WhiteStripe"; version="2.3.0"; sha256="10rnfwq3f6msrzmgifm33dqwnncfhybiah8czh1z7g3iw2859qbc"; depends=[mgcv oro_nifti]; };
   WhopGenome = derive2 { name="WhopGenome"; version="0.9.7"; sha256="1xa7d9x5ny8g79scfkv7v5ix9m3mfzg0fks2bsan9zqyhcd01fsq"; depends=[]; };
   WiSEBoot = derive2 { name="WiSEBoot"; version="1.4.0"; sha256="1fch78884ay7m2gy602k8df78gkvjiwzkjk550w0k4xbv430ld0h"; depends=[FAdist wavethresh]; };
   WikiSocio = derive2 { name="WikiSocio"; version="0.7.0"; sha256="1rc90cidc8mj8x7vw82vx41ivwnmil3cmc1whc8ghxrwli256w32"; depends=[httr igraph pbapply plyr RCurl stringr XML]; };
@@ -3873,7 +3960,7 @@ in with self; {
   WikipediR = derive2 { name="WikipediR"; version="1.5.0"; sha256="1w4ggq42vlq7zbrz3v9ripz9yscbd8m8as60q7cplpxn9zqfdl7q"; depends=[httr jsonlite]; };
   WikipediaR = derive2 { name="WikipediaR"; version="1.1"; sha256="0fxk247jb82g0f3nmwraa4kvdpjxy5s4dcyzj9vkjw2lq8by3l0h"; depends=[httr XML]; };
   WilcoxCV = derive2 { name="WilcoxCV"; version="1.0-2"; sha256="1kbb7ikgnlxybmvqrbn4cd8xnqrkwipk4xd6yja1xsi39a109xzl"; depends=[]; };
-  Wmisc = derive2 { name="Wmisc"; version="0.3.3"; sha256="1yr3754440d53xbhs4ynhaqymqqpsacri7as6f9sicx1qk1cwalg"; depends=[hash R6 Rcpp]; };
+  WindCurves = derive2 { name="WindCurves"; version="0.1.3"; sha256="0bvbnrkdk0g0radgcw4zbhq6czpvq3f7f34x83qk09i8ngmwd28c"; depends=[drc imputeTestbench readbitmap]; };
   WordPools = derive2 { name="WordPools"; version="1.0-2"; sha256="1izs4cymf2xy1lax85rvsgsgi05ygf0ibi9gzxc96sbgvy4m78kf"; depends=[]; };
   WordR = derive2 { name="WordR"; version="0.2.2"; sha256="1q8im3v30xil5qg4m1hypmj439rsx5g2x4mfxsgkz4xz2hwlfh4f"; depends=[dplyr officer ReporteRs]; };
   Wrapped = derive2 { name="Wrapped"; version="2.0"; sha256="1z5kypsd39z9arsw57axckvl8b4jnr5wv60s9z58f5s89gn5vxxg"; depends=[AdequacyModel ald cubfits evd fBasics gamlss_dist GeneralizedHyperbolic GEVStableGarch glogis irtProb LCA lqmm metRology NormalLaplace normalp ordinal sgt SkewHyperbolic sld sn VarianceGamma VGAM]; };
@@ -3881,12 +3968,12 @@ in with self; {
   WriteXLS = derive2 { name="WriteXLS"; version="4.0.0"; sha256="0nwxi36w3rkzw9j0qil64gakhb101rxg1wydjkwlpg0nbsj1sm50"; depends=[]; };
   WufooR = derive2 { name="WufooR"; version="0.6.2"; sha256="1k5nmg8mg8m9salcb0jr87ws548ydc597v8m94y4qrrfchy623rg"; depends=[dplyr httr jsonlite]; };
   XBRL = derive2 { name="XBRL"; version="0.99.18"; sha256="1bwvxqbxdf1ynz2bv27l86h05h8y19q2li2y79xk819p5nkxq341"; depends=[Rcpp]; };
-  XGR = derive2 { name="XGR"; version="1.0.10"; sha256="19fgjg7cd6ax4iiwkp0r4ssr6ygfg16s3i62vr3y63an6ykmg206"; depends=[BiocGenerics dnet GenomicRanges ggplot2 igraph IRanges Matrix plot3D RCircos rtracklayer S4Vectors supraHex]; };
+  XGR = derive2 { name="XGR"; version="1.1.1"; sha256="1m1nr8ass1spkxf5rc1hj53f98xhad4l2xafjim0284q0l01qn2r"; depends=[BiocGenerics dnet dplyr GenomicRanges GenomicScores ggnetwork ggplot2 ggrepel igraph IRanges Matrix plot3D RCircos rtracklayer S4Vectors supraHex tidyr XML]; };
   XHWE = derive2 { name="XHWE"; version="1.0"; sha256="1ca8y9q3623d0vn91g62nrqf3pkbcbkpclmddw5byd37sdrgsi5l"; depends=[]; };
   XKCDdata = derive2 { name="XKCDdata"; version="0.1.0"; sha256="1lx9frlbc549qrh4d3m79r3l9icfzqkgfgp8raa8x46a2havi0a5"; depends=[assertthat dplyr glue htmltools httr jsonlite magrittr tibble]; };
-  XLConnect = derive2 { name="XLConnect"; version="0.2-13"; sha256="1a6a156m1cinscvhnh27di1z8fckrqf876clzg96zrx0h01q2sfz"; depends=[rJava XLConnectJars]; };
-  XLConnectJars = derive2 { name="XLConnectJars"; version="0.2-13"; sha256="1g2ld0r6mjz9fmy1ijhj7x2sxw562yzrnwsryj3a4qj2fmy61g48"; depends=[rJava]; };
-  XML = derive2 { name="XML"; version="3.98-1.9"; sha256="1hzkdkgs0nzmfg9wm7kyh1j9i0i2g7925whzlihqvg9grdlh3dx3"; depends=[]; };
+  XLConnect = derive2 { name="XLConnect"; version="0.2-14"; sha256="06c88rkyavjv3p90hr3cz4y9jx3g6ik3sannjynjnms7d793w0fi"; depends=[rJava XLConnectJars]; };
+  XLConnectJars = derive2 { name="XLConnectJars"; version="0.2-14"; sha256="0ckkvm8i2r60npx0zb36h98gmzgqig9d806cn6r5cghczz6g0xf6"; depends=[rJava]; };
+  XML = derive2 { name="XML"; version="3.98-1.10"; sha256="1faza9bbllp67lf1yv1sllxc3iv8llz52m9diazhq322iqbh97m1"; depends=[]; };
   XML2R = derive2 { name="XML2R"; version="0.0.6"; sha256="0azfh950r2b7ck3n1vzk3mdll7zy844nx3mbk676jxnj8gg7nxk5"; depends=[plyr RCurl XML]; };
   XMRF = derive2 { name="XMRF"; version="1.0"; sha256="0jnyy9pcksfadznidqsbwh8nlqv3k0yppj76q8a2g0aidbdmg2cc"; depends=[glmnet igraph MASS Matrix snowfall]; };
   XNomial = derive2 { name="XNomial"; version="1.0.4"; sha256="1mwx302576rmsjllbq2clfxilm3hkyp5bw0wmwqbn0kgv5wpy8z6"; depends=[]; };
@@ -3894,9 +3981,9 @@ in with self; {
   XRJulia = derive2 { name="XRJulia"; version="0.7.6"; sha256="1bvkrx4nvni858qw3p51bm2pidlfqdmk2pbmhwmb61pcbls3gpk8"; depends=[XR]; };
   XRPython = derive2 { name="XRPython"; version="0.8"; sha256="0alg33spiaqf3jwg1qn543nxvbfaqv8gvf5px3grhbgrcmi5mcmj"; depends=[reticulate XR]; };
   XRSCC = derive2 { name="XRSCC"; version="0.1"; sha256="0hs2whjsd02avaz79zkrd8gjw9qd7l6ysxmhx4w1r7gb1cj9rr7c"; depends=[]; };
-  XiMpLe = derive2 { name="XiMpLe"; version="0.10-1"; sha256="10163snplpw4r4902w2ws60m6wr1icnniv7y0vy7y1nq2c0i0is5"; depends=[]; };
+  XiMpLe = derive2 { name="XiMpLe"; version="0.10-2"; sha256="16dmslc3ji9zbbm2khw8ib8rhwan0mdlfyd4h29v42lcx6l1d0pv"; depends=[]; };
   Xmisc = derive2 { name="Xmisc"; version="0.2.1"; sha256="11gwlcyxhz1p50m68cnqrxmisdk99v8vrsbvyr7k67f0kvsznzs1"; depends=[]; };
-  Xplortext = derive2 { name="Xplortext"; version="1.1.0"; sha256="06jp3dpwslvvjzvakaiy7ra7hd87fp997xwkjq992i41lc6ymwcz"; depends=[FactoMineR ggplot2 gridExtra slam stringr tm]; };
+  Xplortext = derive2 { name="Xplortext"; version="1.1.1"; sha256="18a8qqpakwgv60gm89cmil18q35mlir3xl4yl5j5fswcj5qpdkdx"; depends=[FactoMineR ggplot2 gridExtra slam stringr tm]; };
   YPInterimTesting = derive2 { name="YPInterimTesting"; version="0.1.0"; sha256="0jfvj08acldigd9q25dv2cqyp5a5wjzcb5wa0640y4kc5ga8p08s"; depends=[Rcpp]; };
   YPmodel = derive2 { name="YPmodel"; version="1.3"; sha256="1vll33nm7xynnbq15wksk9c38jhjfd6l1bbzijn5skqc5yik1r5x"; depends=[]; };
   YaleToolkit = derive2 { name="YaleToolkit"; version="4.2.2"; sha256="12wggdyz0wgnmxnqhp8bypyy1x1p50g49fwdzl2l43il44cdyv0g"; depends=[foreach iterators]; };
@@ -3905,13 +3992,14 @@ in with self; {
   YuGene = derive2 { name="YuGene"; version="1.1.5"; sha256="1f1bia1q1z2rzp4pw218zglf02x1m9zpz5gqllrd77ggw8ilqfjc"; depends=[mixOmics]; };
   ZIBseq = derive2 { name="ZIBseq"; version="1.2"; sha256="13rjy4jl9wil6hhpra4qmdis0iyqxchzsf9l7q6r0dz1f7dpd2nq"; depends=[gamlss gamlss_dist nlme]; };
   ZIM = derive2 { name="ZIM"; version="1.0.3"; sha256="1497ki0pr0x21fz5wa2z6zgb2br99z56gvfxyn9cglqq45if6cjh"; depends=[MASS]; };
+  ZOIP = derive2 { name="ZOIP"; version="0.1"; sha256="0fraxzr2mfd7w705j2fryhh9vpg6nkag6kmk7p7in3zknxwipfh3"; depends=[boot GHQp numDeriv rmutil]; };
   ZRA = derive2 { name="ZRA"; version="0.2"; sha256="1sx1q5yf68hhlb5j1hicpj594rmgajqr25llg7ax416j0m2rnagi"; depends=[dygraphs forecast]; };
   ZeBook = derive2 { name="ZeBook"; version="0.5"; sha256="1djwda6hzx6kpf4dbmw0fkfq39fqh80aa3q9c6p41qxzcpim27dw"; depends=[deSolve triangle]; };
   Zelig = derive2 { name="Zelig"; version="5.1.5"; sha256="0lzcin7maz4drn9w3z841kay4ik6rr4ab2l2s56mcj1f0p6ng7pd"; depends=[AER Amelia coda dplyr Formula geepack jsonlite MASS MatchIt maxLik MCMCpack quantreg sandwich survey survival VGAM]; };
   ZeligChoice = derive2 { name="ZeligChoice"; version="0.9-6"; sha256="1whfwc42lsi54xfr423h6jwbvpj6yjyyf0854k1f1ms13liahm8w"; depends=[dplyr Formula jsonlite MASS VGAM Zelig]; };
   ZeligEI = derive2 { name="ZeligEI"; version="0.1-2"; sha256="0kilzfqmm6a41mmjvlynh3rnj30fqiq8gsja28fzwpf0lbl89slg"; depends=[dplyr ei eiPack Formula jsonlite MASS MCMCpack Zelig]; };
   ZillowR = derive2 { name="ZillowR"; version="0.1.0"; sha256="1wrr58p76ps29fqzzwgfvfibxrvc72p2yzs5kc2rv1yxzzcpyxvb"; depends=[RCurl XML]; };
-  Zseq = derive2 { name="Zseq"; version="0.1.1"; sha256="0wz2vrnx499597zyx5vbg12k6zdhs466g03nbzsr1j3xaf33k394"; depends=[Rmpfr]; };
+  Zseq = derive2 { name="Zseq"; version="0.2.0"; sha256="06dndi2b1q79bmxax11bv0l5ifcz1mhpvbn90y6a6xymrgcq0ivi"; depends=[gmp]; };
   aCRM = derive2 { name="aCRM"; version="0.1.1"; sha256="0kzp568hd9c9a9qgniia5s5gv0q5f89xfvvwpzb197gqhs3x092v"; depends=[ada dummies kernelFactory randomForest]; };
   aLFQ = derive2 { name="aLFQ"; version="1.3.4"; sha256="1q2l5cwkcsng22nxckgc7aalvy3qhvgga5nkchfpy53sxg68awqv"; depends=[bio3d caret data_table lattice plyr protiq randomForest reshape2 ROCR seqinr]; };
   aRpsDCA = derive2 { name="aRpsDCA"; version="1.1.1"; sha256="0ghg43rd6bnv4jp8pkpd1ixp5l6kq5pr0mxq61q24s24g0m3s64p"; depends=[]; };
@@ -3919,7 +4007,7 @@ in with self; {
   aSPC = derive2 { name="aSPC"; version="0.1.2"; sha256="1q301rw7dax5v58srg4jlcam1qq2igkaj7kg8wlnlml0hsck4c4a"; depends=[energy mvtnorm]; };
   aSPU = derive2 { name="aSPU"; version="1.48"; sha256="0kjvwwvyhiz9i5kxqg68lq6cvxnk9vzvp5zca5hfv2g77j42wh9h"; depends=[fields gee MASS matrixStats mvtnorm]; };
   aTSA = derive2 { name="aTSA"; version="3.1.2"; sha256="1p3spas0sxj08hkb8p6k2fy64w86prlw1hbnrqnrklr0hnkg2g54"; depends=[]; };
-  aVirtualTwins = derive2 { name="aVirtualTwins"; version="1.0.0"; sha256="193289dm3nvmkx0dmclm1isz62jvvmhynnm1w1964v5nz2jc8vzd"; depends=[party randomForest rpart]; };
+  aVirtualTwins = derive2 { name="aVirtualTwins"; version="1.0.1"; sha256="1jg19ns3mxfycc11i2c152d83n4kqz3dd6d269sijnxrw80kzjki"; depends=[party randomForest rpart]; };
   abbyyR = derive2 { name="abbyyR"; version="0.5.1"; sha256="1s8zf18sh0s89vk3dl09fzrq50csmmfvmsanf5vfkv9n5lx6pklg"; depends=[curl httr plyr progress readr XML]; };
   abc = derive2 { name="abc"; version="2.1"; sha256="0ngzaaz2y2s03fhngvwipmy4kq38xrmyddaz6a6l858rxvadrlhb"; depends=[abc_data locfit MASS nnet quantreg]; };
   abc_data = derive2 { name="abc.data"; version="1.0"; sha256="1bv1n68ah714ws58cf285n2s2v5vn7382lfjca4jxph57lyg8hmj"; depends=[]; };
@@ -3930,7 +4018,7 @@ in with self; {
   abe = derive2 { name="abe"; version="3.0.1"; sha256="1f19h3xzzmjhvwc1rrb8z0rai3ip03y4gdi2gg9bfr5sg2nfklk6"; depends=[]; };
   abf2 = derive2 { name="abf2"; version="0.7-1"; sha256="0d65mc1w4pbiv7xaqzdlw1bfsxf25587rv597hh41vs0j0zlfpxx"; depends=[]; };
   abind = derive2 { name="abind"; version="1.4-5"; sha256="0b1zd8jbnl6l292cr9rb50m09fy3ylxvzkpgi5lfb1nbzddcwfis"; depends=[]; };
-  abjutils = derive2 { name="abjutils"; version="0.0.1"; sha256="0bgk522jxj31crzg3pa4pghz1sjx6gr3jchh9cwqdslr9ydd0g0j"; depends=[devtools dplyr httr magrittr stringr tibble]; };
+  abjutils = derive2 { name="abjutils"; version="0.2.1"; sha256="0qrsc4if7aif73qp95lw6b5986c2r0jn7m39123zij8k15vc935b"; depends=[devtools dplyr glue httr magrittr plyr progress purrr rstudioapi scales stringi stringr tibble tidyr]; };
   abn = derive2 { name="abn"; version="1.0.2"; sha256="0jxpw5mplnpc57jjg9w3zrik40g7va6s8m9zbfsyf0vqn645wfwq"; depends=[Cairo]; };
   abodOutlier = derive2 { name="abodOutlier"; version="0.1"; sha256="1pvhgxmh23br84r0fbmv7g53z2427birdja96a67vqgz18r3fdvj"; depends=[cluster]; };
   abundant = derive2 { name="abundant"; version="1.1"; sha256="1m76qdmqvwpgm0sihazi2dna7cgsz9rljal18vgffb5wamwmg9k7"; depends=[QUIC]; };
@@ -3955,13 +4043,12 @@ in with self; {
   activity = derive2 { name="activity"; version="1.1"; sha256="1lqajgxfps2h6amz1791vp3f52rs9ghmanq1nqfxqd2jmk3idkrx"; depends=[circular overlap pbapply]; };
   activpalProcessing = derive2 { name="activpalProcessing"; version="1.0.2"; sha256="1y0bjx2qx53iy930y9iww4q1yzjj8y16cwgixk1mq3w4g1f116d1"; depends=[chron]; };
   actogrammr = derive2 { name="actogrammr"; version="0.2.3"; sha256="1jzvarmd41yqlrkagzlc8m19n5mn0w0b36fy50lyvgrfsafjfbqa"; depends=[dplyr ggplot2 lubridate readr tidyr]; };
-  actuar = derive2 { name="actuar"; version="2.1-1"; sha256="0d390sygdcy67ww4wdxxfybars7jqpwbc12pvyv01hdqzhzqp04z"; depends=[expint]; };
+  actuar = derive2 { name="actuar"; version="2.3-0"; sha256="0qzzsc9s25l29fi1xgd5ypb4j1l08ghx180n0q5k9p2fn36zjz27"; depends=[expint]; };
   ada = derive2 { name="ada"; version="2.0-5"; sha256="1h3a07czp0w3hrhjcg1fz721y8vsfclzqi3rq8qfzgpfb4h1f06r"; depends=[rpart]; };
-  adabag = derive2 { name="adabag"; version="4.1"; sha256="0a6hwcr0fg0a99y91i3wxrk6k0f7ldwvz9jr3akmiprc28v8r4zz"; depends=[caret mlbench rpart]; };
+  adabag = derive2 { name="adabag"; version="4.2"; sha256="109wrl1pwvmyv2l909hrvk7dg4aa9pv449mvdycp50zwrsw9w0a7"; depends=[caret doParallel foreach rpart]; };
   adagio = derive2 { name="adagio"; version="0.6.5"; sha256="0jy8g5604alaqbi5ynj95ig07igzbgk8x03a4x1rzkvfwvydfflz"; depends=[]; };
-  adapr = derive2 { name="adapr"; version="1.0.2"; sha256="1mbl0b9njjf0zwddkylmwyvrridqqx69v9invxqhc5kc6fvk4f10"; depends=[devtools digest doParallel gdata ggplot2 git2r igraph knitr plotly plyr rmarkdown shiny shinydashboard]; };
-  adaptDA = derive2 { name="adaptDA"; version="1.0"; sha256="0nk7n628d30jz03a2rmpgzrwwd79rlpqvr6lwhilmkg1gblvz7r1"; depends=[MASS]; };
-  adaptMCMC = derive2 { name="adaptMCMC"; version="1.2"; sha256="07zf7kv7q885zjqxcrdl09mzjmjn028g40r1l11y8cg697q0qx75"; depends=[coda Matrix]; };
+  adapr = derive2 { name="adapr"; version="2.0.0"; sha256="1s57jdbi5pik56xjz1d4438ax6cywg2yq2s47h5g6wrwvpgr1qfw"; depends=[archivist devtools digest doParallel gdata ggplot2 git2r igraph knitr plotly plyr rmarkdown shiny shinydashboard versions]; };
+  adaptMCMC = derive2 { name="adaptMCMC"; version="1.3"; sha256="08v11rl0p4w94knb0yzs1ysj42xillya62yaw3zm40d4pqv7vcky"; depends=[coda Matrix]; };
   adaptTest = derive2 { name="adaptTest"; version="1.0"; sha256="08d7a5dlzhaj236jvaw3c91008l66vf5i4k5anhcs32a3j8yh2iv"; depends=[lattice]; };
   adaptiveGPCA = derive2 { name="adaptiveGPCA"; version="0.1.1"; sha256="1jhkiz0gdjvgclqfksm10zza9iwy1z6k5wpviwa4r9a936f1i88k"; depends=[ape ggplot2 phyloseq shiny]; };
   adaptivetau = derive2 { name="adaptivetau"; version="2.2-1"; sha256="1hd2l1jv4i5mg0k0g8bbrvv43nk1zxbwh21594zayrzjyikb2593"; depends=[]; };
@@ -3971,59 +4058,63 @@ in with self; {
   addinslist = derive2 { name="addinslist"; version="0.2"; sha256="04jqhdy0axs1a9c0cfi3pqy9hd67jqxz79a2lj209gd27qv1q22c"; depends=[curl devtools DT miniUI rappdirs rmarkdown rvest shiny shinyjs xml2]; };
   additiveDEA = derive2 { name="additiveDEA"; version="1.1"; sha256="15nxpdybsda6yhjk23bpafr8v1zdx8332pcxf26k795q3ypjpiy2"; depends=[Benchmarking lpSolveAPI]; };
   additivityTests = derive2 { name="additivityTests"; version="1.1-4"; sha256="048ds90wqjdjy1nyhna3m06asdklbh8sx1n556kss2j1r1pma1sw"; depends=[]; };
-  addreg = derive2 { name="addreg"; version="2.0"; sha256="1lc8p70di466i061jrbahq4hir4g5a8rns6044jjjg8v7b1y8alc"; depends=[combinat glm2]; };
-  ade4 = derive2 { name="ade4"; version="1.7-8"; sha256="1a5p3wf8l9cp1bjp57b1pc5bqs39kw1v21i4waj9j18wawzlmpb6"; depends=[]; };
+  addreg = derive2 { name="addreg"; version="3.0"; sha256="13bwmgxylwi02g60j1rr51cr5jvvkl2nvf2lnnhnq46fhvs2ma7s"; depends=[combinat glm2 turboEM]; };
+  ade4 = derive2 { name="ade4"; version="1.7-10"; sha256="0zk81x0yn30gbyc0jpzyw1nxd08ccihl6vyk0ijvj3aw3nr5flc6"; depends=[MASS]; };
   ade4TkGUI = derive2 { name="ade4TkGUI"; version="0.2-9"; sha256="0kfnikkzhyfxskrphr65b8amjhdfq35x6dda4kivdhn7ak07s3ll"; depends=[ade4 adegraphics lattice tkrplot]; };
   adeba = derive2 { name="adeba"; version="1.0.2"; sha256="12zs6rh7sl1fsf8q20hgqms5pykmysnb9mfcwf9x63g44yi26dj4"; depends=[pdist Rcpp]; };
-  adegenet = derive2 { name="adegenet"; version="2.1.0"; sha256="16k3yim5zy68gmng60xcybs3dr82mc3n6989pi5ich9b01hl1r3y"; depends=[ade4 ape boot dplyr ggplot2 igraph MASS reshape2 seqinr shiny spdep vegan]; };
-  adegraphics = derive2 { name="adegraphics"; version="1.0-8"; sha256="1588n1cqgzdv4lpdgsyj47mha41n11sb36vvjdix3drncq997p9b"; depends=[ade4 KernSmooth lattice latticeExtra RColorBrewer sp]; };
-  adehabitat = derive2 { name="adehabitat"; version="1.8.19"; sha256="0vqslabmplnwci3hyidniss21af5hvq6z1jh3afbp78ibshq5a15"; depends=[ade4 shapefiles sp tkrplot]; };
+  adegenet = derive2 { name="adegenet"; version="2.1.1"; sha256="0ynfblp0hbd3dp3k86fn1wyhqr28lk6hs2bg4q7gyf0sfdfzwhrh"; depends=[ade4 ape boot dplyr ggplot2 igraph MASS reshape2 seqinr shiny spdep vegan]; };
+  adegraphics = derive2 { name="adegraphics"; version="1.0-9"; sha256="1fscmisvfd3j9fy1562pjsfpgx16fhr5xwmkzmssxhgyia19f4sr"; depends=[ade4 KernSmooth lattice latticeExtra RColorBrewer sp]; };
+  adehabitat = derive2 { name="adehabitat"; version="1.8.20"; sha256="18z4a8168a2c7248s15hwkjj70dzlkif360cy28jry4a61cm6d81"; depends=[ade4 shapefiles sp tkrplot]; };
   adehabitatHR = derive2 { name="adehabitatHR"; version="0.4.15"; sha256="1bwx2mfkzfknr6fjjkbx2xnm4gksd78i8fz0bcizqyi1zhg5hd0c"; depends=[ade4 adehabitatLT adehabitatMA deldir sp]; };
   adehabitatHS = derive2 { name="adehabitatHS"; version="0.3.13"; sha256="158a6qzks0hml6hk4f1vr66gvwdn09792i2ca3k23061i3j3xp75"; depends=[ade4 adehabitatHR adehabitatMA sp]; };
-  adehabitatLT = derive2 { name="adehabitatLT"; version="0.3.22"; sha256="15hh50c0c4hmkb8859vc1rkbry71pbr71a79nr3z0c62zs497l9z"; depends=[ade4 adehabitatMA CircStats sp]; };
+  adehabitatLT = derive2 { name="adehabitatLT"; version="0.3.23"; sha256="0hf6wpwhsvfp906xk5sadfnvz524zmm05d0h2zxpx6089c6hnw3j"; depends=[ade4 adehabitatMA CircStats sp]; };
   adehabitatMA = derive2 { name="adehabitatMA"; version="0.3.12"; sha256="13mhj36nfs36988g53yrmhyd8yq2zzxl8ppzql63964n04fybbpb"; depends=[filehash sp]; };
-  adephylo = derive2 { name="adephylo"; version="1.1-10"; sha256="1hj9nkl2z2xdb5yv9a7fb7zn9sd41lrhk2ff5z8s88xab3b2vhnc"; depends=[ade4 adegenet ape phylobase]; };
-  adepro = derive2 { name="adepro"; version="0.1.0"; sha256="0gvqfrdmd755nz72022wq5vmdh2z83lr7bg44b07bxyd6id2pak0"; depends=[audio Cairo MASS shape shiny shinyBS]; };
-  adespatial = derive2 { name="adespatial"; version="0.0-9"; sha256="0cmpsf4vhllykmvkxd71qw8axw270zhj9g7n1nr1myvy46p8iqy2"; depends=[ade4 adegraphics adephylo lattice MASS shiny sp spdep]; };
+  adephylo = derive2 { name="adephylo"; version="1.1-11"; sha256="06pnrycc7562h17gxbli935289a48na3p4vpb2w96i5cbrjg4jqm"; depends=[ade4 adegenet ape phylobase]; };
+  adepro = derive2 { name="adepro"; version="2.0.0"; sha256="0q9h7wmkgdnbhg2ygw32jl0bm2vrl32ig2nci9pphgwpsfzb34jq"; depends=[audio Cairo MASS shape shiny shinyBS]; };
+  adespatial = derive2 { name="adespatial"; version="0.1-1"; sha256="19i83s19sbvjm5k0gkw8awz359q67rr3768icsjd118fji45dvg0"; depends=[ade4 adegraphics adephylo lattice MASS shiny sp spdep]; };
   adfExplorer = derive2 { name="adfExplorer"; version="0.1.2"; sha256="0jgh5378ky3bng1zmrvw898ni2nr0lnw9ngkkjxq3i5syp889b09"; depends=[]; };
   adhoc = derive2 { name="adhoc"; version="1.1"; sha256="0a59fv9glcqh4zzd0887ndrhlcaylja6vay2ifajp8an29gjk1vv"; depends=[ape pegas polynom]; };
   adimpro = derive2 { name="adimpro"; version="0.8.2"; sha256="0nfzk9pp4p16c1nvpidngag96r845376h8ljh7m6p6rhk9fs4jdw"; depends=[awsMethods]; };
   adiv = derive2 { name="adiv"; version="1.1"; sha256="12m8p1agahzck1nm8j765wacc6vrl0pa31wld4rqxl7c2pvhs7f4"; depends=[ade4 adegraphics adephylo ape cluster phylobase]; };
-  adjclust = derive2 { name="adjclust"; version="0.5.2"; sha256="0jip7y6vi3p6f1whv5gjapcp2y16l4cvx26x1jmycbjkj0l0zb2k"; depends=[HiTC Matrix matrixStats snpStats]; };
+  adjclust = derive2 { name="adjclust"; version="0.5.6"; sha256="0hff2fjp6dyrsc6crcipq72x7bs3jblv42z7v2c63clrrs7byc0h"; depends=[Matrix matrixStats]; };
   adjustedcranlogs = derive2 { name="adjustedcranlogs"; version="0.1.0"; sha256="08apfvpqvnnalx230p4qf5ckrwm1sgzras4zfrysgym5d4map9ci"; depends=[cranlogs dplyr lubridate rvest xml2]; };
+  adklakedata = derive2 { name="adklakedata"; version="0.6.1"; sha256="1lzj3ib4bgfkq5lq12n47pwc52h7k35xbbwj6brwsgx1gd4fx3x6"; depends=[httr rappdirs]; };
   adlift = derive2 { name="adlift"; version="1.3-3"; sha256="0q4ipk9yax4wqp3jckpx6ihriqaaaz0knxd19cm20qzdx37vz4id"; depends=[EbayesThresh]; };
   admixturegraph = derive2 { name="admixturegraph"; version="1.0.2"; sha256="0ld4qyyvbnr5lz9ff64wjwif4c9xnqyjmbfgbl9bk6pia98zppl3"; depends=[doParallel dplyr foreach ggplot2 MASS neldermead pracma]; };
+  adnuts = derive2 { name="adnuts"; version="1.0.0"; sha256="0jy9wq269r7s70bwld6ngxc6vmaj9vplq4wn97x4f3c6lqy42swc"; depends=[ellipse rstan]; };
   ads = derive2 { name="ads"; version="1.5-2.2"; sha256="17k24dihl41jgkkglhnkj7lvvl53dgahjkb5jhfmfgk6i16c7s23"; depends=[ade4 spatstat]; };
   advclust = derive2 { name="advclust"; version="0.4"; sha256="1g8a8q4zh6d4152jb66fh7wj7k6ks5k4kfcazzw70jdn10yi6b38"; depends=[clue ggplot2 knitr MASS reshape2]; };
   adwave = derive2 { name="adwave"; version="1.2"; sha256="1fnaq9v84y52kb66aq4g0xiqgllk7mi0is5qiafqf546hck3kzz6"; depends=[waveslim]; };
   aemo = derive2 { name="aemo"; version="0.2.0"; sha256="11msifszq7pzmcmwibf2dk2j5dqjc74hrxdxshlprkp6p8sfhijh"; depends=[assertthat dplyr lubridate stringr]; };
+  afCEC = derive2 { name="afCEC"; version="1.0.2"; sha256="0jdppp93z5nb8m5qbry6cvd472mwiq1yrmm11906c3z2bfz7791f"; depends=[Rcpp RcppArmadillo rgl]; };
   afc = derive2 { name="afc"; version="1.4.0"; sha256="1iy1wa88kf6zi6x7lbd0jdir653cvzvdraliqpxbac413wwb5gwl"; depends=[]; };
-  afex = derive2 { name="afex"; version="0.18-0"; sha256="0ls4mc75f2swhxrabvyilggdhf4ps893d4krpp07magz3iyi7gv5"; depends=[car coin lme4 lmerTest lsmeans pbkrtest reshape2 stringr]; };
+  afex = derive2 { name="afex"; version="0.19-1"; sha256="10qbwqwashddj93ivvwlkf3lk14411lmxp24cn7sahqr9lm714f7"; depends=[car coin emmeans lme4 lmerTest pbkrtest reshape2 stringr]; };
   affluenceIndex = derive2 { name="affluenceIndex"; version="1.0"; sha256="1nb2dlsnvjsvkyrfdaskmpr3kv3qgdfb60xgmzvscfli0yf4dzr1"; depends=[]; };
   afmToolkit = derive2 { name="afmToolkit"; version="0.0.1"; sha256="1pm3xyh9vq10mmfgknlvlfr9f027xprrgy1dvbbxpi7f111hv1gl"; depends=[assertthat DBI dplyr ggplot2 gridExtra minpack_lm scales tibble]; };
   afpt = derive2 { name="afpt"; version="1.0.0"; sha256="0kshyzvw8sp7p686xi98g758zld3n7kq44lnvly8d0y8fg6ahcl2"; depends=[]; };
   aftgee = derive2 { name="aftgee"; version="1.0-0"; sha256="0gfp05r6xvn9fcysbqyzkz916axpsc2d3lb5wmb1v92z1zw3037b"; depends=[BB geepack MASS survival]; };
-  agRee = derive2 { name="agRee"; version="0.5-0"; sha256="16ijw02x5qvc8rppf0yn35aljd35alnvjkjyi6725nywjib2xy5x"; depends=[coda lme4 miscF R2jags]; };
+  agRee = derive2 { name="agRee"; version="0.5-1"; sha256="1hmqvpcz4vnpcl9f92q5fy1ca89l9sq25fnsw2mxfsa0yqbyxpw6"; depends=[coda lme4 miscF R2jags]; };
+  aggregation = derive2 { name="aggregation"; version="1.0.1"; sha256="0j9g604m2ccc7hcy02539yja9cf3xcbl25gvp838bp4x8w18my46"; depends=[]; };
   agop = derive2 { name="agop"; version="0.1-4"; sha256="1jwyl02z053rsdw9hryv1nyj9wlq310l51fghp1p0j51c159mlpx"; depends=[igraph Matrix]; };
+  agriTutorial = derive2 { name="agriTutorial"; version="0.1.2"; sha256="0zcyawmhflm4rbxnyf6gdwrnff4f13yajc81n13ykw7bfi8xphqi"; depends=[emmeans ggplot2 lattice lmerTest nlme pbkrtest]; };
   agricolae = derive2 { name="agricolae"; version="1.2-8"; sha256="1c6n52jralp33hl3nmpv9fc9vsvs6lcz9j75f2zbz0r4sqd2mw89"; depends=[AlgDesign cluster klaR MASS nlme spdep]; };
-  agridat = derive2 { name="agridat"; version="1.12"; sha256="1b3dgrp6mkfpfaywqdm22sakadhnl1vlyj1n3rq6bc2f0gf8kcrw"; depends=[lattice reshape2]; };
+  agridat = derive2 { name="agridat"; version="1.13"; sha256="1029n2jkbvybvkbf4pwdjrw6m05xyzn5xyqyfziqb7xnw51ksm2p"; depends=[]; };
   agrmt = derive2 { name="agrmt"; version="1.40.4"; sha256="1y2gnq6b4zkxknygg73r8qrd435y7c69iqn8i56kwk1ccc1rwddx"; depends=[]; };
   agsemisc = derive2 { name="agsemisc"; version="1.3-1"; sha256="1905q35jgjhghlawql43yh296kbpysp927x3hj750yshz5zayzyr"; depends=[lattice MASS]; };
   ahaz = derive2 { name="ahaz"; version="1.14"; sha256="1z7w5rxd5cya7kxhgxqvn72k87y33ginxra9g7j9wrfs5jgx6kvx"; depends=[Matrix survival]; };
   ahnr = derive2 { name="ahnr"; version="0.2.0"; sha256="0bfy7xxfxfzhv4yl9dlsyl304673p23r2h0lz3lv75iqp2gbzdjr"; depends=[ggplot2 magrittr matrixcalc pdist pracma purrr visNetwork]; };
   ahp = derive2 { name="ahp"; version="0.2.11"; sha256="09n06k5dmmpw6h6s51x9xy6rkk54fswss8pflh3v9nprbx7vzx4i"; depends=[data_tree DiagrammeR formattable yaml]; };
   aiRthermo = derive2 { name="aiRthermo"; version="1.1"; sha256="0i3sq7i37i82ad70z2mai09rxzk4kk27hfg5jjbh6pajwzyn5yri"; depends=[]; };
-  aidar = derive2 { name="aidar"; version="1.0.0"; sha256="01vs14bz4k504q5lx65b60kyi7hgvjdmib8igiipjmg4snwh8hdk"; depends=[XML]; };
+  aidar = derive2 { name="aidar"; version="1.0.5"; sha256="1q2iz2qzh2yl0v0sc537xq4vbx2nblym3kv419vr7jvrghdpx3vj"; depends=[XML]; };
   aimPlot = derive2 { name="aimPlot"; version="1.0.0"; sha256="1d52b7kccxba6j7n0gbd7pzs0p87zn32vv8gdf2f7lyr75qzgz7x"; depends=[ggplot2]; };
   airGR = derive2 { name="airGR"; version="1.0.9.64"; sha256="08nw07v5d5pljk839i5j5wgrc5lny7v6kl8m2hd6bm9aijql7hg4"; depends=[]; };
   aire_zmvm = derive2 { name="aire.zmvm"; version="0.5.0"; sha256="14n2wycfxpj8wb45671pysqxr434b3wgrnbx2vfpsxw46lkqid0i"; depends=[dplyr httr lubridate readr rvest sp stringr tidyr xml2]; };
   ajv = derive2 { name="ajv"; version="1.0.0"; sha256="1qd5ncb7rdnnvqfknsvq9nrpxrh0zv3jyh4b91dcvfvhp262vfrm"; depends=[RJSONIO V8 yaml]; };
   akima = derive2 { name="akima"; version="0.6-2"; sha256="1klprj4a2pgy5pwdwnrn3siisi2lh8hr4z6vz38sdvjkcmakxnk1"; depends=[sp]; };
   akmeans = derive2 { name="akmeans"; version="1.1"; sha256="1nqbxbx583n0h2zmpy002rlmr6j86j6bg76xj5c69brrh59dpyw1"; depends=[]; };
-  alR = derive2 { name="alR"; version="2.2.0"; sha256="1hri2vifgwrklmx5087vlxkd1nv1y42rrhpzm4nk1sbn2b3lcway"; depends=[alabama DEoptimR pbdMPI Rcpp RcppArmadillo]; };
   alabama = derive2 { name="alabama"; version="2015.3-1"; sha256="0mlgk929gdismikwx4k2ndqq57nnqj7mlgvd3479b214hksgq036"; depends=[numDeriv]; };
   alakazam = derive2 { name="alakazam"; version="0.2.8"; sha256="0lilldxynwhp1i538k3xb9c73956agxj6v8zickxkba1sx4k5zrc"; depends=[dplyr ggplot2 igraph lazyeval progress Rcpp readr scales seqinr stringi]; };
-  ald = derive2 { name="ald"; version="1.1"; sha256="1ar9mrvfw2jz4js9prbp9icsync7fw6wpirpximsr4cy1klqjfpn"; depends=[]; };
+  ald = derive2 { name="ald"; version="1.2"; sha256="1xmvxmyc1nmsrlyr0rvzz20jx6g1f2jvxpg9f39v48ngg5gmanjj"; depends=[]; };
   alfred = derive2 { name="alfred"; version="0.1.4"; sha256="1g4l0fz0lw34ffp6spx535zfrgkgwm41qrn0bg3lpl1kx9m3i2ir"; depends=[dplyr jsonlite lubridate magrittr tibble tidyr]; };
   algorithmia = derive2 { name="algorithmia"; version="0.0.2"; sha256="0kly70l9si8ni8n5xm30vai70pvfvip6354scvjqj34362s0lm0a"; depends=[base64enc httr rjson xml2]; };
   algstat = derive2 { name="algstat"; version="0.0.2"; sha256="1ssdrrwnxrhx3syndqxqcaldlbnjamk3x2yiq7jgxy0qsiadmqsi"; depends=[mpoly Rcpp reshape2 stringr]; };
@@ -4037,7 +4128,7 @@ in with self; {
   alphaOutlier = derive2 { name="alphaOutlier"; version="1.2.0"; sha256="09yrbv7jsiymw5gzp8p92ki70v1fys2k75x4sb9s7wy3c58wn1cd"; depends=[nleqslv quantreg Rsolnp]; };
   alphabetr = derive2 { name="alphabetr"; version="0.2.2"; sha256="1pmp6zwhgycb38y5jbvrbv2nza7gyjh508vy09ml483c2cysvc1r"; depends=[clue dplyr multicool Rcpp]; };
   alphahull = derive2 { name="alphahull"; version="2.1"; sha256="129b2j9j60p2wvbb8703x18pydv1g715vmjcb1a80v70i93w4f49"; depends=[ggplot2 R_utils sgeostat spatstat splancs tripack]; };
-  alphashape3d = derive2 { name="alphashape3d"; version="1.2"; sha256="1apbirffqipdj618qgqh7vjlhg9fp6ncxb0yk4dclpn7g645863x"; depends=[geometry rgl]; };
+  alphashape3d = derive2 { name="alphashape3d"; version="1.3"; sha256="15l8hsn3jcn5jzwfpya99v2mzrgmhl3i587nw6cx4aky75ajslcx"; depends=[geometry rgl]; };
   alphavantager = derive2 { name="alphavantager"; version="0.1.0"; sha256="02vv0mks73rih4xwabsnk8rkl3cipd27k5lak9lp1rl0agp8g68v"; depends=[devtools dplyr glue httr jsonlite lubridate purrr readr stringr tibble tidyr]; };
   alr3 = derive2 { name="alr3"; version="2.0.5"; sha256="0zrrsv2kjq3cky3bhk6gp32p1qpr1i5k2lx7c1w08bql0nb1x740"; depends=[car]; };
   alr4 = derive2 { name="alr4"; version="1.0.5"; sha256="0m8jgc4mfni17psf8m0avf0m364vcq5k3c9x807p98ch2z5nsygv"; depends=[car effects]; };
@@ -4050,9 +4141,10 @@ in with self; {
   amen = derive2 { name="amen"; version="1.3"; sha256="1qaznfmnh3dlnp41afd37lr328qzy50hn8hi0c302wj0f992ycqg"; depends=[]; };
   aml = derive2 { name="aml"; version="0.1-1"; sha256="09xxlxp784wlb561apns3j8f2h9pfk497cy5pk8wr4hhqqv4d3al"; depends=[lars]; };
   ampd = derive2 { name="ampd"; version="0.2"; sha256="0bi8qngd37n60ym516yjcahxc536vdwm60rq5ld32170hww69j7c"; depends=[]; };
+  amt = derive2 { name="amt"; version="0.0.2.0"; sha256="1w6rdyzyzxsa5qxmcpm1ahgz65z72nil3ay51m8g9qjk7v1xrj8p"; depends=[broom circular dplyr fitdistrplus FNN geosphere lazyeval leaflet lubridate maptools purrr raster Rcpp rgeos rlang sp survival tibble tidyr tidyverse]; };
   anMC = derive2 { name="anMC"; version="0.2.0"; sha256="1j6dah49sgfsb7bj4xys5rcaqw12rrkqhqryqz2xhdkazjmz3gpq"; depends=[mvtnorm Rcpp RcppArmadillo]; };
   anacor = derive2 { name="anacor"; version="1.1-3"; sha256="0mj8g9p4fla0ax9jvcq7kii4lrhj8g872p11nys06anva22qjp51"; depends=[car colorspace fda]; };
-  analogsea = derive2 { name="analogsea"; version="0.5.0"; sha256="1lfa8vl42n2wjl8r4m0144sircrrdvcanjd85l5m54r4vack846p"; depends=[httr jsonlite magrittr yaml]; };
+  analogsea = derive2 { name="analogsea"; version="0.6.0"; sha256="1fcvf3yci3szm155pnk89q36dgc55wdlffvll642zn26zc5d1y5n"; depends=[aws_s3 httr jsonlite magrittr yaml]; };
   analogue = derive2 { name="analogue"; version="0.17-0"; sha256="00wk4jnzif28ibx9s3m68qdx64ycdgg5yr6ybb0srlydikvf1sy8"; depends=[brglm lattice MASS mgcv princurve vegan]; };
   analogueExtra = derive2 { name="analogueExtra"; version="0.1-1"; sha256="1s3qs10hf6hkna0bicid1mc8x8r449bl93xpgyw6lnsjgh2yx62c"; depends=[analogue rgl vegan3d]; };
   analytics = derive2 { name="analytics"; version="2.0"; sha256="1jkdjqc3fnvvsgi6x9ncf36rxzq0a55cmgkcv92mfmpcramg2lk6"; depends=[car cluster fractal lmtest MASS np powerplus robust trend TSA urca]; };
@@ -4069,15 +4161,16 @@ in with self; {
   animalTrack = derive2 { name="animalTrack"; version="1.0.0"; sha256="0jlvfflpaq64s48sblzh1n1vx8g3870iss97whigri29s6hn79ry"; depends=[rgl]; };
   animation = derive2 { name="animation"; version="2.5"; sha256="0pxmihfr3q1hh4cdnzf7wbzqak5spa3kv4p1wl89giqqngqzwcmj"; depends=[]; };
   anipaths = derive2 { name="anipaths"; version="0.8.0"; sha256="1czs8s4kb1a0s25bd4nv1w1p52wxr4q5zfch5xgp766rgfpahylr"; depends=[animation knitr RColorBrewer rgdal scales sp]; };
+  annovarR = derive2 { name="annovarR"; version="1.0.0"; sha256="0l2csp06m5f3i1b4h0pvl8mmzx25c0b411c5sdc3qszirbplh038"; depends=[AnnotationDbi BioInstaller configr data_table DBI futile_logger glue ngstk RMySQL RSQLite stringi stringr vcfR]; };
   anocva = derive2 { name="anocva"; version="0.1.1"; sha256="1byg40jla71k1901js5h9yq89j63d00vkm60id1fxlpv95c4wdrr"; depends=[cluster]; };
   anoint = derive2 { name="anoint"; version="1.4"; sha256="10gdqgag9pddvxh80h458gagvv1474g4pcpa71cg3h7g62rqvmv5"; depends=[glmnet MASS survival]; };
   anomalyDetection = derive2 { name="anomalyDetection"; version="0.2.4"; sha256="0a9m9bxz9v9xx19lq8yih727p7zy25ndfamwajzgh0zvx394h0jz"; depends=[caret dplyr ggplot2 gmp magrittr MASS plyr purrr Rcpp RcppArmadillo tibble tidyr]; };
   anominate = derive2 { name="anominate"; version="0.6"; sha256="01p2qkqf88bzhwywyass5r8dwg2ycflmkbzmsps7fzy0kv3xyb02"; depends=[coda MCMCpack pscl wnominate]; };
   anonymizer = derive2 { name="anonymizer"; version="0.2.0"; sha256="0zlzxcqy8fjhh6ab58a1pi0k686dzgap58d160ms6bsr5mgn3fbf"; depends=[]; };
-  antaresProcessing = derive2 { name="antaresProcessing"; version="0.11"; sha256="165rqsqq3cp5kak4513rv5ibbq61nipvybvmm4m8ynwbd4q5p7p9"; depends=[antaresRead data_table]; };
+  antaresProcessing = derive2 { name="antaresProcessing"; version="0.13"; sha256="0v6jyvw2bxjagbkcd08w6rxdws34idqd938726c0s36cj1a583n5"; depends=[antaresRead data_table]; };
   antaresRead = derive2 { name="antaresRead"; version="2.0.2"; sha256="0rilfd8f8wc57ai8s1xl4h346y3qdgspa8j694nnj9n4zss30ycb"; depends=[data_table lubridate plyr shiny stringr]; };
-  antaresViz = derive2 { name="antaresViz"; version="0.11"; sha256="0v6li8m6zl39pvs7h6cwc5zqsap7q973cqcdwar29l0zrg2f6x4a"; depends=[antaresProcessing antaresRead data_table dygraphs geojsonio htmltools htmlwidgets leaflet leaflet_minicharts lubridate magrittr manipulateWidget miniUI plotly shiny sp tibble webshot]; };
-  antitrust = derive2 { name="antitrust"; version="0.95.1"; sha256="14qz4c78lyfhgh3xyybn2sb8kl4rjzvb3dwrwxl9dzjmk5k6ab7i"; depends=[BB evd ggplot2 MASS numDeriv]; };
+  antaresViz = derive2 { name="antaresViz"; version="0.12.0"; sha256="0066kidfkiyqw6fzkvi40hdpy25djvni9s0q69c8gjvzrh84i5p5"; depends=[antaresProcessing antaresRead assertthat data_table dygraphs geojsonio htmltools htmlwidgets leaflet leaflet_minicharts lubridate manipulateWidget plotly raster rgeos shiny sp spMaps webshot]; };
+  antitrust = derive2 { name="antitrust"; version="0.98"; sha256="1n8js5hwl96a76g50mq69hsf46v6ajf3s7kr19pfrqnp3jgi3gk3"; depends=[BB evd ggplot2 MASS numDeriv]; };
   antiword = derive2 { name="antiword"; version="1.1"; sha256="0nbx2l0d2y4qvcw4dw3m26zfkgdmav4cq0l00gib7l3y9pqxzjh5"; depends=[sys]; };
   anytime = derive2 { name="anytime"; version="0.3.0"; sha256="1byhgplskj17d0gib9sajfnzyv8p9slgq1vy8fq9j2ibirl86a91"; depends=[BH RApiDatetime Rcpp]; };
   aod = derive2 { name="aod"; version="1.3"; sha256="1a6xs5d5289w69xd2salsxwikjjhjzvsnplqrq78b1sr6kzfyxz3"; depends=[]; };
@@ -4090,7 +4183,7 @@ in with self; {
   apaStyle = derive2 { name="apaStyle"; version="0.5"; sha256="1x3kgyxhgbx3r7wi759j75wh811jcm6z559mrk4zm4p99vqz10bl"; depends=[ReporteRs]; };
   apaTables = derive2 { name="apaTables"; version="1.5.1"; sha256="1ajff635vvypi457wk55bp8kddm80hg2af3hayp3rvjvdk8a8fjv"; depends=[broom car dplyr MBESS]; };
   apc = derive2 { name="apc"; version="1.3"; sha256="1hgkqkvry9is8kjk2w46k637sig7fdznnc75wbrc8bq1hbrmf785"; depends=[lattice]; };
-  apcluster = derive2 { name="apcluster"; version="1.4.4"; sha256="16m6akgs4cg5423cdz25i11wayff2c2qbq2sih5yfs9ssdk4ii64"; depends=[Matrix Rcpp]; };
+  apcluster = derive2 { name="apcluster"; version="1.4.5"; sha256="0ipg5m3d7fnbvvlavbv8q8ixyrcgdspzwkv00q93f4biybza27x6"; depends=[Matrix Rcpp]; };
   apdesign = derive2 { name="apdesign"; version="1.0.0"; sha256="041zyd7ih9nnj92jj9vb9ya1ij9lmj1dzx64q74vyiadw1ix5l66"; depends=[Matrix]; };
   ape = derive2 { name="ape"; version="5.0"; sha256="0q59pmxawz498cb9mv5m49lhiwxib8ak94yyydz7qg8b6lpd4bn3"; depends=[lattice nlme Rcpp]; };
   apercu = derive2 { name="apercu"; version="0.2.3"; sha256="0w9hi8pdjb3nschh4cy387q67jxhkl2bn9vir949rsl831x4cs1j"; depends=[pls]; };
@@ -4107,7 +4200,7 @@ in with self; {
   approxmatch = derive2 { name="approxmatch"; version="1.0"; sha256="1z1lrbfvm380p2az88hrxr3f2cgbv2h70wzm99vi9a2dmh0pl7qy"; depends=[]; };
   aprean3 = derive2 { name="aprean3"; version="1.0.1"; sha256="17rnq02sncl6rzwyln10200s43b8z1s2j0kdi9kgcb6qr51v12rv"; depends=[]; };
   apricom = derive2 { name="apricom"; version="1.0.0"; sha256="1gyd1yln14cn0iswj7sjs4hav6j6d4f3ncps4gqbci5fwha5blcr"; depends=[logistf penalized rms shrink]; };
-  aprof = derive2 { name="aprof"; version="0.3.2"; sha256="1rv7nr1y7jdvj2p8c6p67sn11bvmif2kj70fb2029hnsjk7lm15b"; depends=[]; };
+  aprof = derive2 { name="aprof"; version="0.3.9"; sha256="1w95z3n08nq2fsj8dljgfkz76s1jc3sz2aia3bnfq62yd003qsnl"; depends=[]; };
   apsimr = derive2 { name="apsimr"; version="1.2"; sha256="14vhsm6am2c2q2sgabnhxr0lgldifss0anjpisrhjqk04njllviy"; depends=[ggplot2 lubridate MASS mgcv reshape2 XML]; };
   apsrtable = derive2 { name="apsrtable"; version="0.8-8"; sha256="1qmm89npjgqij0bh6p393wywl837lfsshp2mv9b5izh1sg2qfwvw"; depends=[]; };
   apt = derive2 { name="apt"; version="2.5"; sha256="1y18bqnnxy5p0xx9gbfrnrzq3nlhw3psl5zlibrw6lfhb8lxd4mk"; depends=[car copula erer gWidgets urca]; };
@@ -4117,17 +4210,17 @@ in with self; {
   aqr = derive2 { name="aqr"; version="0.4"; sha256="04frgil3nbxsww66r9x0c6f308pzqr1970prp20bdv9qm3ym5axw"; depends=[RCurl xts]; };
   arabicStemR = derive2 { name="arabicStemR"; version="1.2"; sha256="1vflynbi7aln7x2p4jg9gsvfrxn4v6qkb4wbrzxmj561lqy9fcay"; depends=[]; };
   arc = derive2 { name="arc"; version="1.1.3"; sha256="1p186f769vqhd36l5bivm1yi5kjgv9fjmlafjx0ibyascbcz131h"; depends=[arules discretization Matrix R_utils]; };
-  archdata = derive2 { name="archdata"; version="1.1"; sha256="07ca51kl5imy6d9s0qi501xxl3zn4q3gbm0w8kvznfw8imclq17z"; depends=[]; };
+  archdata = derive2 { name="archdata"; version="1.2"; sha256="0igh6qy3yv5hzprj9izpkqp3f6jkb7pydqzmnl8sqhqjqvb3lnij"; depends=[]; };
   archetypes = derive2 { name="archetypes"; version="2.2-0"; sha256="1djzlnl1pjb0ndgpfj905kf9kpgf9yizrcvh4i1p6f043qiy0axf"; depends=[modeltools nnls]; };
-  archiDART = derive2 { name="archiDART"; version="2.0"; sha256="1ypbkj0wzpj8rhpjp3vc9yk7icjg40xn0ms11mcmhphkjpczmay5"; depends=[rgl XML]; };
-  archivist = derive2 { name="archivist"; version="2.2"; sha256="0fywc2rjvv8j4d4pyky0la2i3ds3ai3nx70drqvgdajdxxms9vsy"; depends=[DBI digest httr lubridate magrittr RCurl RSQLite]; };
+  archiDART = derive2 { name="archiDART"; version="3.0"; sha256="0yh9asf45l2fxxm67vg9snaqbvs1bb24lm2xsrb6xrr62avdrqlq"; depends=[rgl sp TDA XML]; };
+  archivist = derive2 { name="archivist"; version="2.3"; sha256="0rwdk2scmd06j428zadcxmvshvssf421265632595hvcacqz6yy4"; depends=[DBI digest httr lubridate magrittr RCurl RSQLite]; };
   archivist_github = derive2 { name="archivist.github"; version="0.2.2"; sha256="04xb2i47y12ic87gb2l30bldil0505h7s9601hq0afjg3npx6jq7"; depends=[archivist digest git2r httr jsonlite]; };
   areaplot = derive2 { name="areaplot"; version="1.2-0"; sha256="0xzfgbnzqsvnq46nsxwyqrwldbaqns3h5np0f5wxpjda9cy2rna1"; depends=[]; };
   arf3DS4 = derive2 { name="arf3DS4"; version="2.5-10"; sha256="12cbrk57c9m7fj1x7nfmcj1vp28wj0wymsjdz8ylxhm3jblbgmxc"; depends=[corpcor]; };
-  arfima = derive2 { name="arfima"; version="1.6-2"; sha256="05ya1h6xpvs1gmhv68xfm7xf8g3g312ch7ibqi9xhi02vxniwg85"; depends=[ltsa]; };
+  arfima = derive2 { name="arfima"; version="1.6-6"; sha256="0nb0r937jcl2khyj7xy41a383dbzdigjls87yjcwwgmzbpcznwal"; depends=[ltsa]; };
   argon2 = derive2 { name="argon2"; version="0.2-0"; sha256="0kqn06rpb39jlzizjlnc5c44mfic8llrshxn7ljgmyj35lbqwxqh"; depends=[]; };
   argosfilter = derive2 { name="argosfilter"; version="0.63"; sha256="0rrc2f28hla0azw90a5gk3zj72vxhm1b6yy8ani7r78yyfhgm9ig"; depends=[]; };
-  argparse = derive2 { name="argparse"; version="1.0.7"; sha256="1ph13n8zv591vc427sihj765h27mkdrjyf1whg3as3i644bjsaqs"; depends=[findpython getopt proto rjson]; };
+  argparse = derive2 { name="argparse"; version="1.1.1"; sha256="0fzrbj87b274vf96azdnsjxk2nf45d5wy58vzmlah4b4h7q4j524"; depends=[findpython getopt jsonlite proto]; };
   argparser = derive2 { name="argparser"; version="0.4"; sha256="0s1wxshx4jk69wfxhycx973q6y8cmqrfymyjklhq1i8xrj0kmmx9"; depends=[]; };
   ari = derive2 { name="ari"; version="0.1.0"; sha256="05pva8jp7dhl46dm1fha6f8mavrs76a6c491fq3mavly8qcbgx44"; depends=[aws_polly progress purrr rmarkdown rvest tuneR webshot xml2]; };
   arm = derive2 { name="arm"; version="1.9-3"; sha256="00773z8ai07s9wa2annzjqrxml3z13fh9zqls0z1n7s3h8fwrvqw"; depends=[abind coda lme4 MASS Matrix nlme]; };
@@ -4137,11 +4230,12 @@ in with self; {
   aroma_cn = derive2 { name="aroma.cn"; version="1.6.1"; sha256="1d9g81b12a3m03wrvb3cvg33fjybgiabpxhci2y2rr6diay42pmr"; depends=[aroma_core matrixStats PSCBS R_cache R_filesets R_methodsS3 R_oo R_utils]; };
   aroma_core = derive2 { name="aroma.core"; version="3.1.1"; sha256="0mbhk818m8if6cr7g42yy7ba13jh2xs66xkx4zh7dqlwrrmgjnk1"; depends=[future listenv matrixStats PSCBS R_cache R_devices R_filesets R_methodsS3 R_oo R_rsp R_utils RColorBrewer]; };
   arrApply = derive2 { name="arrApply"; version="2.0.1"; sha256="007fsqgb9bsr4mscljhp37dvrk7cv6nrb7y28w8kc7mxvgdq29wg"; depends=[Rcpp RcppArmadillo]; };
+  arrangements = derive2 { name="arrangements"; version="1.0.2"; sha256="0vqxx0pzvvqnbklpxrcq7d5ppicwbwk3gb2846in0gqjhn4ya4g1"; depends=[gmp R6]; };
   arrayhelpers = derive2 { name="arrayhelpers"; version="1.0-20160527"; sha256="1ib91hpg6xgy0jr4sb8ib19x0v4f5n96lak0qm0z5vksawgcnp1l"; depends=[svUnit]; };
   ars = derive2 { name="ars"; version="0.5"; sha256="0m63ljb6b97kmsnmh2z5phmh24d60iddgz46i6ic4rirshq7cpaz"; depends=[]; };
-  arsenal = derive2 { name="arsenal"; version="0.6.0"; sha256="1p3yfqjbxg1j1k65n1lfnkgncsw1wbrbvswn5psvn9cdfnjnf939"; depends=[testthat]; };
+  arsenal = derive2 { name="arsenal"; version="1.0.0"; sha256="0fv3zq0i28sbdvwh589c27j4k734vr90aik3gxdablgasrhdjfza"; depends=[testthat]; };
   artfima = derive2 { name="artfima"; version="1.5"; sha256="1nqsq9fsqk9kag9n7i2r9yvf578nkdfrkkv7qy8650prka0jca2p"; depends=[gsl ltsa]; };
-  arules = derive2 { name="arules"; version="1.5-4"; sha256="1j9cckdqr11mxb584svzz89j71mkr6rlqkcd2ps8b95pnqkdaijg"; depends=[Matrix]; };
+  arules = derive2 { name="arules"; version="1.5-5"; sha256="05v3sin5w4b28ms34mvk3ha59c74pq20afrlq41ylfxxzffrljar"; depends=[Matrix]; };
   arulesCBA = derive2 { name="arulesCBA"; version="1.1.2"; sha256="0c37cffb89gsyv5shpgiksrh5hi2lzdqsk7xl8lxzz6mnv4v1xrj"; depends=[arules caret Matrix testthat]; };
   arulesNBMiner = derive2 { name="arulesNBMiner"; version="0.1-5"; sha256="1q4sx6c9637kc927d0ylmrh29cmn4mv5jxxpl09yaclzfihjlk9a"; depends=[arules rJava]; };
   arulesSequences = derive2 { name="arulesSequences"; version="0.2-19"; sha256="1cncvrf7za38b3vdwbzy4yrbakj7jbpxrl1jg6bvjnlkymiajavx"; depends=[arules]; };
@@ -4152,13 +4246,14 @@ in with self; {
   asbio = derive2 { name="asbio"; version="1.5"; sha256="0p54a9x54jg81hd86br6b3dg3sr9kzl9rmnrh7x3m6bkinzc780c"; depends=[deSolve lattice multcompView mvtnorm pixmap plotrix scatterplot3d]; };
   ascii = derive2 { name="ascii"; version="2.1"; sha256="19dfbp7k4bjxjn8wdzhbmz7g3za6gn8vcnd5qkm4dz7gg1fg7b8p"; depends=[]; };
   asciiSetupReader = derive2 { name="asciiSetupReader"; version="1.2"; sha256="11smjl1cvbsgiql3b90x05aa8bspikijc5vzzw4d0hzpyj1j0zmy"; depends=[data_table haven readr stringi stringr]; };
+  asciiruler = derive2 { name="asciiruler"; version="0.2"; sha256="0xhkbsy9dypk09avazgxczyfkh3rhdxhwci688dw1lxnhxv1hj24"; depends=[stringr]; };
   asd = derive2 { name="asd"; version="2.2"; sha256="0p3r4qjam3sl3rpcilb0pgx4xx3ly71xqnvkv31vzjs885lgxz4l"; depends=[mvtnorm]; };
   asdreader = derive2 { name="asdreader"; version="0.1-3"; sha256="15a922aw0v5w4hrha03xifx8cpifcc773gambgwqq6i5nz08ya26"; depends=[]; };
   ash = derive2 { name="ash"; version="1.0-15"; sha256="1ay2a2agdmiz7zzvn26mli0x0iwk09g5pp4yy1r23knhkp1pn2lb"; depends=[]; };
   ashr = derive2 { name="ashr"; version="2.0.5"; sha256="0blr19ipcanwjxizilkd8hb37dlhb6idjcw2lf0ll8pkd2l68f5z"; depends=[assertthat doParallel etrunct foreach pscl Rcpp SQUAREM truncnorm]; };
   asht = derive2 { name="asht"; version="0.9.3"; sha256="075gzxly8sqkbwnznxcr4z3zs1qvlyl8c4ishgxk035ik1w6p16n"; depends=[bpcp coin exact2x2 exactci perm ssanv]; };
   aslib = derive2 { name="aslib"; version="0.1"; sha256="0dkb6bb6dqavjklbciqxqhi3fdqib9asdnhiap2gp9b9wfnkyq7k"; depends=[BatchExperiments BatchJobs BBmisc checkmate corrplot ggplot2 llama mlr parallelMap ParamHelpers plyr reshape2 RWeka stringr yaml]; };
-  asnipe = derive2 { name="asnipe"; version="1.1.5"; sha256="1kwwl6k3fpk7pgf1qkzyglgwvsf4g92hhs7aiaryqq3ys7a029i8"; depends=[MASS Matrix]; };
+  asnipe = derive2 { name="asnipe"; version="1.1.8"; sha256="10pza52bcfdj9412hr69lcv4n43y0n91hfkbq8338fsqpad98ilz"; depends=[MASS Matrix]; };
   aspace = derive2 { name="aspace"; version="3.2"; sha256="1g51mrzb6amafky2kg2mx63g6n327f505ndhna6s488xlsr1sl49"; depends=[Hmisc shapefiles splancs]; };
   aspect = derive2 { name="aspect"; version="1.0-4"; sha256="1kxddm8v1y0v2r7lg24r1wpzk7lqzxlrpzq5xb9kn343g53lny6i"; depends=[]; };
   aspi = derive2 { name="aspi"; version="0.2.0"; sha256="0rhvxw243vvdv3hxa6pi343gcjc2cbxq1jzqirl9k1l4i3897l87"; depends=[]; };
@@ -4186,27 +4281,28 @@ in with self; {
   assist = derive2 { name="assist"; version="3.1.3"; sha256="0ngnn75iid5r014fcly29zhcfpqkqq24znncc3jdanbhdmfyybyz"; depends=[lattice nlme]; };
   assocInd = derive2 { name="assocInd"; version="1.0.1"; sha256="16yzgvlqbapjhvzm5nw8vfrhh8mp9llnhck4bpgmszyrh93z1ha5"; depends=[]; };
   assortnet = derive2 { name="assortnet"; version="0.12"; sha256="1vyzrb8vsi9pcdn6jd83k77bg0q2a3dwdvlnmxnshqiif2pakb8m"; depends=[]; };
-  aster = derive2 { name="aster"; version="0.9.1"; sha256="0z976r9ljawfdzvmsb1arpllgs3l2r5wimdvbpcw08r1qdyyzwj8"; depends=[trust]; };
+  aster = derive2 { name="aster"; version="0.9.1.1"; sha256="12zn3wcx0n37fbnwwcz517libsgkbfphwbr4m68zba4craqhh5mi"; depends=[trust]; };
   aster2 = derive2 { name="aster2"; version="0.3"; sha256="17d200sg0vn1fj6lb480dhszm70q6ipjldilb3x0jp72hiczakk9"; depends=[Matrix]; };
   astro = derive2 { name="astro"; version="1.2"; sha256="1c7zrycgj2n8gz50m94ys1dspilds91s1b2pwaq6df1va17pznby"; depends=[MASS plotrix]; };
   astroFns = derive2 { name="astroFns"; version="4.1-0"; sha256="0g5q0y067xf1ah91b4lg8mr9imj0d6lgig7gbj3b69fn335k363g"; depends=[]; };
   astrochron = derive2 { name="astrochron"; version="0.7"; sha256="12p4n530f4w4idadqidm6w38xdm119bipc63z34q3a2z5gmdd71b"; depends=[fields IDPmisc multitaper]; };
   astrodatR = derive2 { name="astrodatR"; version="0.1"; sha256="00689px4znwmlp6qbj6z2a51b7ylx1yrrjpv6zjkvrwpv6lyj9fw"; depends=[]; };
   astrolibR = derive2 { name="astrolibR"; version="0.1"; sha256="0gkgry5aiz29grp9vdq9zgg6ss47ql08nwcmz1pfvd0g0h9h75l8"; depends=[]; };
-  astsa = derive2 { name="astsa"; version="1.7"; sha256="1rzl1ayzv8lnn2009j4v667pp8sxdbn7qbqqyjpq00c75f4wss6x"; depends=[MASS]; };
+  astsa = derive2 { name="astsa"; version="1.8"; sha256="023nk6chyy79scjzhv42px5cpym7rnm1c55ylcslyjdmlr5i6afk"; depends=[]; };
   asus = derive2 { name="asus"; version="1.0.0"; sha256="16hp8xajb631a5amm1cvhzq8z4cwh1vjiavv3n11fzpxyskhmfrb"; depends=[rwt wavethresh]; };
   asymLD = derive2 { name="asymLD"; version="0.1"; sha256="1q05pxwn6arpalspgf2m0cym4ivnwyv94i58k9kaihd37kvm5lgc"; depends=[]; };
-  asymmetry = derive2 { name="asymmetry"; version="1.2.4"; sha256="0c2a4d8ryb1d1vw465n3rq7w9j9sidqbigqxv43b8f0wbsr0q6h1"; depends=[gplots rJava smacof]; };
+  asymmetry = derive2 { name="asymmetry"; version="1.2.5"; sha256="0wsmarmij4crhv5wr4mqibsf787cy7fmmp4xrclsb3gm3g1xwvzz"; depends=[gplots rJava smacof]; };
   asympTest = derive2 { name="asympTest"; version="0.1.3"; sha256="11nlkgws3y8xbz3yli55414a2rkk7367q9q5r2ssa61jaiimibhh"; depends=[]; };
   asypow = derive2 { name="asypow"; version="2015.6.25"; sha256="0il38djkmw5ka7czpalmhq6yycx7flpdpgbd7p5nx52rsjdv49mj"; depends=[]; };
   atlantistools = derive2 { name="atlantistools"; version="0.4.3"; sha256="06rb0c4ralx55mdlqwpjzim0inxif4cdi9732v4h1ll8jhlm5v7d"; depends=[circlize dplyr ggplot2 gridExtra lazyeval magrittr proj4 purrr RColorBrewer RNetCDF rvest scales stringr tibble tidyr xml2]; };
   atmcmc = derive2 { name="atmcmc"; version="1.0"; sha256="05k69b5wlysz3kh0yiqvshgvr0nyz34zkvn6bjs30cwz7s9j21pn"; depends=[]; };
-  atsd = derive2 { name="atsd"; version="1.0.8441"; sha256="1jz2bdgvk1wamrm8r9ygprhyf0z3mdk9c1pwlb4bfmwvbnqd0yqa"; depends=[httr RCurl]; };
+  atsd = derive2 { name="atsd"; version="1.2.0"; sha256="0jan8r5f2r3l2xpdf9rrv4smkr2l645rfdgdfjb1xa54jd3pqvqs"; depends=[httr RCurl]; };
+  attempt = derive2 { name="attempt"; version="0.2.0"; sha256="1i3y39qzk1bpg1m8f3v8bhigdcklv00ypy93npbh8lyhq4w8lk3v"; depends=[rlang]; };
   attrCUSUM = derive2 { name="attrCUSUM"; version="0.1.0"; sha256="113y40v9hyvnvvzvyqg81n0n1h84pj4zph5q8p0vc0384hw00544"; depends=[Rcpp RcppArmadillo]; };
   attribrisk = derive2 { name="attribrisk"; version="0.1"; sha256="1zqx53mxz2hh9jyanf3jkadgpj44jbqrk4p13fas91zvhpw9pn5s"; depends=[boot survival]; };
   atus = derive2 { name="atus"; version="0.1"; sha256="15arijdfyci43k0a32zc8qmm73fmzrr3ghhxw0kgipdr3w5xcmz3"; depends=[]; };
   auRoc = derive2 { name="auRoc"; version="0.1-0"; sha256="1ijk127p6g5mzc7b4b9lnjnfzvklz3g8w6bckrdahlw7djd9mgz1"; depends=[coda MBESS ProbYX rjags]; };
-  aucm = derive2 { name="aucm"; version="2017.3-2"; sha256="124rb1lhssvmlzkzb5h6hc5plv0hk7wkid53cbd28nxx1grp2wwm"; depends=[kyotil]; };
+  aucm = derive2 { name="aucm"; version="2018.1-24"; sha256="0x10dawlwxqywjl7mxc2gpp2r4wnd7pb6n80xlrb9yywm7zbb6x2"; depends=[kyotil]; };
   auctestr = derive2 { name="auctestr"; version="1.0.0"; sha256="15b1x0c9yhl91gir7jmivp8vxzc8q7wvb0mgam9454avc6l29x4y"; depends=[dplyr tidyr]; };
   audio = derive2 { name="audio"; version="0.1-5"; sha256="1hv4052n2r6jkzkilhkfsk4dj1xhbgk4bhba2ca9nf8ag92jkqml"; depends=[]; };
   audiolyzR = derive2 { name="audiolyzR"; version="0.4-9"; sha256="09jsrjy15vcn6da0kgk06ghayyrf3s853gqv8qdawg745ky2hbgi"; depends=[hexbin plotrix RJSONIO]; };
@@ -4222,9 +4318,10 @@ in with self; {
   automagic = derive2 { name="automagic"; version="0.3"; sha256="0yzv0ianfq217jvz7rba86bcmxh09p513khvq6jk5k7isblvn0qd"; depends=[devtools dplyr formatR githubinstall knitr magrittr pacman purrr remotes yaml]; };
   automap = derive2 { name="automap"; version="1.0-14"; sha256="1190kbmp0x80x0hyifdbblb4ijq79kvrfn9rkp5k6diig4v30n0w"; depends=[gstat lattice reshape sp]; };
   automultinomial = derive2 { name="automultinomial"; version="1.0.0"; sha256="15cxnqaai2dln6jvk7lpfqvlpv5237zn18axp459p5zxcgg0lw88"; depends=[Hmisc igraph MASS Matrix]; };
+  autoplotly = derive2 { name="autoplotly"; version="0.1.1"; sha256="1pm1760dd9p0h66q7y1v9icfhz1lk6i5akjda06jc2f0rq7mzlj0"; depends=[ggfortify ggplot2 plotly]; };
   autopls = derive2 { name="autopls"; version="1.3"; sha256="1qf5gk1vsz1p5670w7bgzh3b15wvrx1gy6ih4sivw0vj8bcjxbw9"; depends=[pls]; };
-  autothresholdr = derive2 { name="autothresholdr"; version="0.6.0"; sha256="1m3nz094czxx8sdnpww47qrh4g8g9lk97g9vs95v7al34whlq8xd"; depends=[EBImage magrittr Rcpp rJava RSAGA]; };
-  autovarCore = derive2 { name="autovarCore"; version="1.0-0"; sha256="08h51bh1m3d47nprd5z7v3k3lkrixbxwinr73zd5442wskf4x82v"; depends=[Amelia jsonlite Rcpp urca vars]; };
+  autothresholdr = derive2 { name="autothresholdr"; version="1.1.2"; sha256="0gkab2fnavjfb7h2fd2jbk5phz10hc18kf3l6r2zvvmq3gfhh2db"; depends=[checkmate ijtiff magrittr Rcpp RSAGA]; };
+  autovarCore = derive2 { name="autovarCore"; version="1.0-2"; sha256="0yvz3nn792xdam8hgnkdrhcyaf9idp0shb1s0yfj1xigknlinn9n"; depends=[Amelia jsonlite Rcpp urca vars]; };
   available = derive2 { name="available"; version="1.0.0"; sha256="0w4i0ajw0p71k717v8hg9d8az08m8yl97w5lly87kli36p7mv30h"; depends=[cli clisymbols crayon desc glue jsonlite memoise purrr SnowballC stringdist tibble tidytext udapi yesno]; };
   averisk = derive2 { name="averisk"; version="1.0.3"; sha256="02j27d4jxgy2bk5sgxp1xdfyqr321civs99qj0g8cp34gwqk0j3m"; depends=[MASS]; };
   aws = derive2 { name="aws"; version="1.9-6"; sha256="0mfq44pji0p6d7s1wbwi0f97lsh3f33wnj8fiyimpg9fv8lr4inz"; depends=[awsMethods gsl]; };
@@ -4239,13 +4336,13 @@ in with self; {
   aws_signature = derive2 { name="aws.signature"; version="0.3.5"; sha256="1ijzdxv46x5iydmhgbri4lfpdhhlhz1ybhwwdcy4m4mjz9s74yhk"; depends=[base64enc digest]; };
   aws_sns = derive2 { name="aws.sns"; version="0.1.7"; sha256="0i8nn5jnykhsjwn4nsqdqbagankjc09zs8and54rkirdigzdny8v"; depends=[aws_signature httr jsonlite xml2]; };
   aws_sqs = derive2 { name="aws.sqs"; version="0.1.10"; sha256="09sh3injb4kfrq5al7hmbnqdn5v5hnjkqqsz86vpi4154435ymdg"; depends=[aws_signature httr jsonlite xml2]; };
-  awsMethods = derive2 { name="awsMethods"; version="1.0-4"; sha256="0n4mxn9fkqkvv19mfaqhrmhwhmkxiahfnls47b5ki3a3gsr6cm8l"; depends=[]; };
+  awsMethods = derive2 { name="awsMethods"; version="1.1-0"; sha256="1xywcadpjyzlw5f2k9sbr8fvrj3kcr1r6swi23lc952yrl3gvpkl"; depends=[]; };
   awsjavasdk = derive2 { name="awsjavasdk"; version="0.2.0"; sha256="1461h565il4y68g0a3k7wgn9jyb6pys8405f780ldg6g44aa7p60"; depends=[assertthat R_utils rappdirs rJava]; };
   awspack = derive2 { name="awspack"; version="0.1.6"; sha256="0pf6g9w2r2rm887sa3v0gfwia2w2q94m40m76sq66gb3spkmngd5"; depends=[aws_alexa aws_cloudtrail aws_ec2metadata aws_iam aws_lambda aws_polly aws_s3 aws_ses aws_signature aws_sns aws_sqs]; };
   aylmer = derive2 { name="aylmer"; version="1.0-11"; sha256="1b6dryvfz9yp00nj8lv8j1isnshcgwn9fx41knah9pw7dn4pxkk2"; depends=[Brobdingnag]; };
   b6e6rl = derive2 { name="b6e6rl"; version="1.1"; sha256="17scdskn677vaxx1h2jypqaffvjgczryplg17nr3wigi1x0cxg7a"; depends=[]; };
   bPeaks = derive2 { name="bPeaks"; version="1.2"; sha256="1z6jghcmw0lwv17ms7gdp5zzimaawq3ahbwkxa4062g373592smd"; depends=[]; };
-  bReeze = derive2 { name="bReeze"; version="0.4-1"; sha256="113giw1aw6b5h0h5794p2p7zrwqz38mn9ihhpca7r8g7w74kpsdi"; depends=[]; };
+  bReeze = derive2 { name="bReeze"; version="0.4-2"; sha256="04zapsxb4lsi85m9qgrsm49yasf0b8wk0djdpa7xks4hjvmskfhq"; depends=[]; };
   bWGR = derive2 { name="bWGR"; version="1.5"; sha256="0pa7g5dnnakgxzial0xf03pvmcfplx40cdfvmmyv2fcjrq2d85jd"; depends=[Rcpp]; };
   babar = derive2 { name="babar"; version="1.0"; sha256="13j5klrcnd4dwrgdbxlvwcj56l9mzi4j9ga6jj5i04pgdc6vsfx5"; depends=[]; };
   babel = derive2 { name="babel"; version="0.3-0"; sha256="1iwvx69051yhlxbcl6bypvc3mcih0q8bf3i29r3i79356hp12xqa"; depends=[edgeR]; };
@@ -4253,9 +4350,8 @@ in with self; {
   backShift = derive2 { name="backShift"; version="0.1.4.2"; sha256="1nj7mcdpzfzq68qg86rrys752gzw69n99yyb0jzg6r8qrgpcxj49"; depends=[clue ggplot2 igraph MASS matrixcalc mvnmle reshape2]; };
   backblazer = derive2 { name="backblazer"; version="0.1.0"; sha256="020kdydksm0brnxsa00blf5sylxd4hz49wmngk1x1fx43kdlyc41"; depends=[httr jsonlite openssl]; };
   backpipe = derive2 { name="backpipe"; version="0.1.8.1"; sha256="1nid5rbgwiq8axkrl2gwl4vr5bjq5k5nrhq7macddvijcn3r2dz8"; depends=[]; };
-  backports = derive2 { name="backports"; version="1.1.1"; sha256="15w8psmv203wzijrk4hvwaw3i4byh2m5s09yrkqwhfckhaj82kj9"; depends=[]; };
+  backports = derive2 { name="backports"; version="1.1.2"; sha256="0mml9h3xagi7144pyb3jj9zbh9qzns7izkhdg7df20v7bikr6nz8"; depends=[]; };
   backtest = derive2 { name="backtest"; version="0.3-4"; sha256="1s0mf247dz2vvyf4m3sp9xiqhv7xcs4rphyg9gdcy73060sah2ad"; depends=[lattice]; };
-  backtestGraphics = derive2 { name="backtestGraphics"; version="0.1.6"; sha256="14l9dbkbcx4kl45kpjbq4ihzf47j859khhd1db40vnp8x57g9xcx"; depends=[dplyr dygraphs scales shiny xts]; };
   bacr = derive2 { name="bacr"; version="1.0.1"; sha256="14zr1v4rihx0ra3x0vsb81vsz0g8gzskkdxkg7nhiz835hp2fiy8"; depends=[MCMCpack]; };
   badgecreatr = derive2 { name="badgecreatr"; version="0.1.0"; sha256="070zb5jw817s9ykqc3dvzjqk48612gydkdc31svc0ji01s1y1545"; depends=[stringr]; };
   badger = derive2 { name="badger"; version="0.0.2"; sha256="15qnb0a6rqsf1dbb1cf9ag2z5f4zhf8b8psxbsdhh42qrg8g3mma"; depends=[dlstats rvcheck]; };
@@ -4280,44 +4376,44 @@ in with self; {
   base64enc = derive2 { name="base64enc"; version="0.1-3"; sha256="13b89fhg1nx7zds82a0biz847ixphg9byf5zl2cw9kab6s56v1bd"; depends=[]; };
   base64url = derive2 { name="base64url"; version="1.2"; sha256="1dmpb6cyabs6fqnbwshyws107p961203wic7his6zywsn9axymfc"; depends=[backports]; };
   baseballDBR = derive2 { name="baseballDBR"; version="0.1.2"; sha256="0w54g1avcqamc12lmvjchlqbqck9jfjccm441k03nsql460mpydq"; depends=[dplyr magrittr rvest xml2]; };
-  basefun = derive2 { name="basefun"; version="0.0-38"; sha256="17g37p73ym42vmnjrfv1lzfxvi7y03ji42w5mb2wdngd2ynd5cb2"; depends=[Matrix orthopolynom polynom variables]; };
+  basefun = derive2 { name="basefun"; version="0.0-39"; sha256="1ylp9x2k275y30k2p7rljmwq0lfj7vb36d1fh4lvmaazci9dqz6c"; depends=[Matrix orthopolynom polynom variables]; };
   baseline = derive2 { name="baseline"; version="1.2-1"; sha256="1vk0vf8p080ainhv09fjwfspqckr0123qlzb9dadqk2601bsivgy"; depends=[SparseM]; };
+  basicTrendline = derive2 { name="basicTrendline"; version="1.0.1"; sha256="0rsmlp70ylpkqv437jcy3skwbfkj4xwkpjb2q79b9n8kw2ir0716"; depends=[]; };
+  basicspace = derive2 { name="basicspace"; version="0.20"; sha256="0nyljk8ydasirgv7ijxplyhk10s8m9k3rw5qmgf0z81dm7p257wc"; depends=[]; };
   basictabler = derive2 { name="basictabler"; version="0.1.0"; sha256="1m4cgghfh3aixsnwjlbaj3prnnqxhij60bakz9vdr5dvnqg92an9"; depends=[dplyr htmltools htmlwidgets jsonlite R6]; };
   bastah = derive2 { name="bastah"; version="1.0.7"; sha256="08xdba16wj0inp0kq2sbcrdr6wj8bwlq7rqnfrzjrz03wxhc5bk0"; depends=[BigQuic foreach glmnet lars MASS Matrix scalreg]; };
   batade = derive2 { name="batade"; version="0.1"; sha256="1lr0j20iydh15l6gbn471vzbwh29n58dlpv9bcx1mnsqqnsgpmal"; depends=[hwriter]; };
   batch = derive2 { name="batch"; version="1.1-4"; sha256="03v8a1hsjs6nfgmhdsv6fhy3af2vahc67wsk71wrvdxwslmn669q"; depends=[]; };
   batchmeans = derive2 { name="batchmeans"; version="1.0-3"; sha256="1qkdljngvlahk0pbrkarkjh2g4sxxwiva9f3m5y8gz8pjw9fpy9n"; depends=[]; };
-  batchtools = derive2 { name="batchtools"; version="0.9.7"; sha256="1fpb142kdw478gvsawvipfcgmm75xz5wlcxjfgz692i50inlb13j"; depends=[backports base64url brew checkmate data_table digest progress R6 rappdirs stringi withr]; };
+  batchtools = derive2 { name="batchtools"; version="0.9.8"; sha256="1ch03hj8ahkfc9sr4gv985s6zzxk5xm2dbm0hm8xjygkqkd8r5n9"; depends=[backports base64url brew checkmate data_table digest progress R6 rappdirs stringi withr]; };
   batman = derive2 { name="batman"; version="0.1.0"; sha256="0ccgx506p4iri23k2ikb8jmh04dp08w66785bv52iy8kd359h43f"; depends=[Rcpp]; };
   batteryreduction = derive2 { name="batteryreduction"; version="0.1.1"; sha256="0j838q7063bplkzd50kmnxji80cgysfsq7m1qifv8z7a2zsh8c8g"; depends=[pracma]; };
   bayesAB = derive2 { name="bayesAB"; version="1.1.0"; sha256="0g74n6jvpmb2sbmywcagb10rk8sd3pxzkw9s8s6qpg34q58v01a6"; depends=[ggplot2 Rcpp]; };
   bayesCL = derive2 { name="bayesCL"; version="0.0.1"; sha256="1l278lxidn16nma2ny14wjajcqyzbr6j5xl2lj08cic26c7hvjbm"; depends=[]; };
-  bayesDP = derive2 { name="bayesDP"; version="1.2.2"; sha256="0lfw3mnk6kgpzg0h0r54k5dndgpbsb2i2q59qwsm6k14nz1b5n5j"; depends=[ggplot2 Rcpp RcppArmadillo survival]; };
+  bayesDP = derive2 { name="bayesDP"; version="1.3.0"; sha256="1g7d64brln5p2gindc18jk4wqmh6phqr4zhs8jhl0yk9g4jhsqzn"; depends=[ggplot2 Rcpp RcppArmadillo survival]; };
   bayesDccGarch = derive2 { name="bayesDccGarch"; version="2.0"; sha256="1s2b8f43wi9ja966n2p2r4l4s79vk6xb8mqaxsagnw90g969p681"; depends=[coda numDeriv]; };
   bayesDem = derive2 { name="bayesDem"; version="2.5-1"; sha256="1cxrqil1p692mbzkcj1fvsx335qyy6c1y43mq48s4shs1hhc69bn"; depends=[bayesLife bayesPop bayesTFR gWidgets gWidgetsRGtk2 RGtk2 wpp2015]; };
   bayesGARCH = derive2 { name="bayesGARCH"; version="2.1.3"; sha256="1480mmzfshchfbfh3x420cq5qblfh59jkl21hkq2jvnwppksdn9w"; depends=[coda mvtnorm]; };
   bayesGDS = derive2 { name="bayesGDS"; version="0.6.2"; sha256="0ash16hmassn76x3f59dfvp4plqp8vb17qzcwmag7vi3mi3y2ap6"; depends=[Matrix]; };
-  bayesImageS = derive2 { name="bayesImageS"; version="0.4-1"; sha256="1s5fs35mkc1xg15a593ga7251ib7ipl0fkpfk5mrbd01dkrqn15g"; depends=[Rcpp RcppArmadillo]; };
+  bayesImageS = derive2 { name="bayesImageS"; version="0.5-1"; sha256="1p4l3i57xm8yrczdiz4nxmd8qv0pv0chlrpvndfn3fnjbcx2cfa2"; depends=[Rcpp RcppArmadillo]; };
   bayesLife = derive2 { name="bayesLife"; version="3.2-0"; sha256="1a3x3y77542hgndvymhnyg6dys0s5rimkgprl8psflsgsrxnbmcv"; depends=[bayesTFR car coda hett wpp2017]; };
-  bayesLopod = derive2 { name="bayesLopod"; version="1.0.0"; sha256="1kn3pqplbxk8vgyw8yy4p3xcdi57yd2ms0a7wz3w7jfgx334a7d9"; depends=[BH ggplot2 inline raster Rcpp RcppEigen rgeos rstan rstantools slam sp StanHeaders]; };
-  bayesMCClust = derive2 { name="bayesMCClust"; version="1.0"; sha256="14cyvcyx3nmkbvsy7n4xjp7zvcgdhy013dv9d72y8j5dvlv82pb4"; depends=[bayesm boa e1071 gplots gtools MASS mnormt xtable]; };
+  bayesLopod = derive2 { name="bayesLopod"; version="1.0.1"; sha256="0v9yy75mvr74jc0fz10qj1acwxjy0lbqkdqaj1hn88v294r9dw3q"; depends=[BH inline raster Rcpp RcppEigen rgeos rstan rstantools slam sp StanHeaders]; };
   bayesPop = derive2 { name="bayesPop"; version="6.2-3"; sha256="1znjf8mihip0dl7dyk8h3nbkzihz8lnf7kxvhf1l363v449s0bff"; depends=[abind bayesLife bayesTFR fields googleVis plyr reshape2 rworldmap wpp2012 wpp2017]; };
   bayesQR = derive2 { name="bayesQR"; version="2.3"; sha256="1c6y7r9h9626ghp68pl5k1g0l95fwd6dp0jfznmhy53qza0ny8z4"; depends=[]; };
-  bayesSurv = derive2 { name="bayesSurv"; version="3.1"; sha256="1dbk9bi4l5m5hmn10i7qm3ypb5y91dxr7b01xvrb2wpn6i1s9h7n"; depends=[coda smoothSurv survival]; };
-  bayesTFR = derive2 { name="bayesTFR"; version="6.1-1"; sha256="12f3s1k7jalaqd3hxhlrn2i6nvzsmcgv5k1jfhbmk7py5b7ybj2p"; depends=[coda MASS mvtnorm wpp2017]; };
+  bayesSurv = derive2 { name="bayesSurv"; version="3.2"; sha256="1zp302pfi64nnqdiqldvfi1lm0wv2dplz5sfjp0ydl1qc16z0axp"; depends=[coda smoothSurv survival]; };
+  bayesTFR = derive2 { name="bayesTFR"; version="6.1-2"; sha256="092sl8xk82kybpp0v06j0dxh4zal0d6j2na42ghl2ri36iy6wqvx"; depends=[coda MASS mvtnorm wpp2017]; };
   bayesbio = derive2 { name="bayesbio"; version="1.0.0"; sha256="08qa4lzkrcwin7n3kzfqfdlnlqahdmjl1lxpdh29n780cgyjfvs0"; depends=[]; };
   bayesboot = derive2 { name="bayesboot"; version="0.2.1"; sha256="0gd3in9z8kx3d29dvyd8blmhlc7wxxl5b2hxnrrq0w13jcnsn57w"; depends=[HDInterval plyr]; };
   bayescount = derive2 { name="bayescount"; version="0.9.99-5"; sha256="0c2b54768wn72mk297va3k244256xlsis9cd6zn6q5n1l7ispj6j"; depends=[coda rjags runjags]; };
   bayesianETAS = derive2 { name="bayesianETAS"; version="1.0.3"; sha256="0nbif0b6lcik2kh948zg5ska5mvkdsfr0dg8ndnfpscm2mp7y1dg"; depends=[]; };
-  bayeslm = derive2 { name="bayeslm"; version="0.5.0"; sha256="0i57l9rbffl050yxiyg2x0pdivnk6bvympspwvkr3aayaaxhsqyh"; depends=[coda Rcpp RcppArmadillo]; };
+  bayeslm = derive2 { name="bayeslm"; version="0.6.0"; sha256="1pdkrmmlk9wbkw5mmqg43g31kpfnaxks6p5xasv1vf617wc9hj7b"; depends=[coda Rcpp RcppArmadillo RcppParallel]; };
   bayesloglin = derive2 { name="bayesloglin"; version="1.0.1"; sha256="0j2ziahf6mwsz2gvb1azvdzlmszlpqgr5zqcqa68pxgq947sa2cs"; depends=[igraph]; };
   bayeslongitudinal = derive2 { name="bayeslongitudinal"; version="0.1.0"; sha256="0g45ikpnbry1albb3asrzab5z3sy98yf74c64qn02d65xgafifwg"; depends=[LearnBayes MASS mvtnorm]; };
   bayesm = derive2 { name="bayesm"; version="3.1-0.1"; sha256="04b4s8clxrmdyhnhd2arnsdi992422yam3z91w6dzrmngwxq4yaq"; depends=[Rcpp RcppArmadillo]; };
-  bayesmeta = derive2 { name="bayesmeta"; version="2.0"; sha256="0789c63dxhj9hag0gz819dfrddvx68218liak6hqa9df2yd9dzwn"; depends=[forestplot]; };
+  bayesmeta = derive2 { name="bayesmeta"; version="2.1"; sha256="02aw7fgvdsnqasmvljh1pd5nks1hjys7n3kmlwnkr5a6w476v1q9"; depends=[forestplot metafor]; };
   bayesmix = derive2 { name="bayesmix"; version="0.7-4"; sha256="1qms1nnk2nq3gqr8zf2b9ri4wv8jrxv5i8s087k1rwdvya3k5r9a"; depends=[coda rjags]; };
   bayesplot = derive2 { name="bayesplot"; version="1.4.0"; sha256="0izp2v734n4pcdlfjrhasl2srlnhccsf93ni6hfhl5l5xyf02043"; depends=[dplyr ggplot2 reshape2 rlang]; };
   bayespref = derive2 { name="bayespref"; version="1.0"; sha256="0gwlzs7qkgmf90np7xv85d27jjqggyhfj00vpya664a2znyjb3jm"; depends=[coda lattice MASS MCMCpack RColorBrewer]; };
-  bayesreg = derive2 { name="bayesreg"; version="1.0"; sha256="0crld04cxxqw0xq2d4rdv040iq7vchwjbzacj0z8jv245hwgr9qy"; depends=[BayesLogit]; };
   bayess = derive2 { name="bayess"; version="1.4"; sha256="0axipk5hn2hw3g4dfh7y3xa0dxqmi8kqpbr77nl14y7ydpija6xm"; depends=[combinat gplots MASS mnormt]; };
   bayou = derive2 { name="bayou"; version="1.1.0"; sha256="1ndd7lygphngvn4a432616f6anmhxbdzmkksrhpl76xvrw5agwkc"; depends=[ape coda denstrip fitdistrplus foreach geiger MASS mnormt phytools Rcpp RcppArmadillo]; };
   bazar = derive2 { name="bazar"; version="1.0.6"; sha256="12b1x218x1yh9iadv8ciyncr841s0arvj4pbn74bryhcgbvmbwqm"; depends=[kimisc]; };
@@ -4325,33 +4421,34 @@ in with self; {
   bbemkr = derive2 { name="bbemkr"; version="2.0"; sha256="015c57s8mpimm82nddnh382wlkisxgdmc2hvp7k38pcnqxc5gb5q"; depends=[MASS]; };
   bbmle = derive2 { name="bbmle"; version="1.0.20"; sha256="1xzij7swrrzl5ly8l3lw6awh486zcm00251dwqws1y23fbgyh3vc"; depends=[lattice MASS numDeriv]; };
   bbo = derive2 { name="bbo"; version="0.2"; sha256="19xrbla3bb3csg3gjjrpkgyr379zfwyh293bcrcd6j8rnm6g4i01"; depends=[]; };
+  bbw = derive2 { name="bbw"; version="0.1.3"; sha256="1z3an561qh0rfi3jhh1ghsdbg8aimqmf4hpqri2jz39in3p0gwg4"; depends=[car]; };
   bc3net = derive2 { name="bc3net"; version="1.0.4"; sha256="15dghd0v1s71h77iw8b49v5h7wcda5mb4540lfyibsdipbashv2h"; depends=[c3net igraph infotheo lattice Matrix]; };
   bcROCsurface = derive2 { name="bcROCsurface"; version="1.0-2"; sha256="0v1zjbgpalr5ag97s9rxcd2z0r7qpw8yhc4lw4p4i3xkw2paf5zh"; depends=[boot nnet Rcpp RcppArmadillo rgl]; };
   bcRep = derive2 { name="bcRep"; version="1.3.6"; sha256="1fibx11ykkkjv4sgg6zc2a0g270384z2cf68hwghnld0wi002b5z"; depends=[ape doParallel foreach gplots ineq plotrix proxy stringdist vegan]; };
   bclust = derive2 { name="bclust"; version="1.5"; sha256="01kx02azj26b6swly53zhf3sny6c6jglkxnzylsc0pvri89x7yj2"; depends=[]; };
+  bcmaps = derive2 { name="bcmaps"; version="0.17.0"; sha256="18rn9zlagp5f0268m8azcbl52jcyx33jjxaqpg05cz853fxib24h"; depends=[httr rappdirs sf]; };
   bcp = derive2 { name="bcp"; version="4.0.0"; sha256="1bkd7812jacyk955l71b2szpc9550p0hpv3x337qgl09zck4vdgm"; depends=[Rcpp RcppArmadillo]; };
   bcpa = derive2 { name="bcpa"; version="1.1"; sha256="0rwbd39szp0ar9nli2rswhjiwil31zgl7lnwm9phd0qjv8q0ppar"; depends=[plyr Rcpp]; };
   bcpmeta = derive2 { name="bcpmeta"; version="1.0"; sha256="02fw1qz9cvr7pvmcng7qg7p04wxxpmvb2s8p78f52w4bf694iqhl"; depends=[mvtnorm]; };
-  bcrm = derive2 { name="bcrm"; version="0.4.6"; sha256="1nqa7kd83h8gh6bb5lbd17m1hgv8vjlbbq8w0i1fgmadz7y5rpji"; depends=[ggplot2 mvtnorm]; };
-  bcrypt = derive2 { name="bcrypt"; version="1.0"; sha256="12qlad4rb5zjj7ilcj11zhiir9jvp8hciz7f7viwk2m6jpl0dl2b"; depends=[openssl]; };
-  bcs = derive2 { name="bcs"; version="1.0.0"; sha256="0wv7kfcr6i36ik8v3prwp4mrwg1x6vf5nmybq9a57fz66pf1ff1x"; depends=[fda Rcpp RcppArmadillo wmtsa]; };
+  bcrm = derive2 { name="bcrm"; version="0.4.7"; sha256="0s0xmmphrrsqnrsnnsqh9ska6afl4jyk0s0290w6askrlqdzjgil"; depends=[ggplot2 mvtnorm]; };
+  bcrypt = derive2 { name="bcrypt"; version="1.1"; sha256="1wwdin8x09y8n8zrwj1ylh5ikcz0v0la4wmrsvbdr61cg336wzx4"; depends=[openssl]; };
   bcv = derive2 { name="bcv"; version="1.0.1"; sha256="0yqcfariw9sw0b8cpljcr7vf5rf0cwr1wbif23icchfaxk2m42gj"; depends=[]; };
-  bda = derive2 { name="bda"; version="5.1.6"; sha256="0rpxvmjbqiph8hpzsvlj8q6h70jsc9771fiq7l3lmkz69jn1gf4q"; depends=[]; };
+  bda = derive2 { name="bda"; version="10.1.9"; sha256="06ycxqjpnsywakjkjxf1czhxsbdzbpwa11m69gad5538z066d24x"; depends=[]; };
   bde = derive2 { name="bde"; version="1.0.1"; sha256="1f25gmjfl58x4pns89abfk85yq5aad3bgq9yqpv505g5gxk62d3v"; depends=[ggplot2 shiny]; };
   bdlp = derive2 { name="bdlp"; version="0.9-1"; sha256="1ydb5hsaj1bfdz7hcdkc74qlk608kf0xrbpw247klkxrhsh9ba2p"; depends=[DBI GenOrd MASS MultiOrd rgl RSQLite stringdist]; };
   bdots = derive2 { name="bdots"; version="0.1.15"; sha256="1a665f9f18wajf4y6jp17icg9w6wx698xfnlry2sm5pq6nrkmwln"; depends=[doParallel doRNG foreach mvtnorm nlme]; };
   bdpopt = derive2 { name="bdpopt"; version="1.0-1"; sha256="1z7mdqklw3frsdzyhvx8s8wvblwm28fr1gca2yrivqjng0r47lx4"; depends=[coda rjags]; };
   bdpv = derive2 { name="bdpv"; version="1.1"; sha256="0i6wdf27243ch8pn2chqriwxjg3g72wbvzlx52mz4ahw700xjc7n"; depends=[]; };
-  bdrift = derive2 { name="bdrift"; version="1.2.2"; sha256="03vwiyvxv174l0sy76gp2x8lwjf3s45zxzwrlbn97hg9c3j9adjm"; depends=[Quandl quantmod scales xts zoo]; };
   bdscale = derive2 { name="bdscale"; version="2.0.0"; sha256="1hkkfd69g2bg2y4hicjs6bnw9f0zw74jy0dpadchnzw17lffpms3"; depends=[ggplot2 scales]; };
-  bdsmatrix = derive2 { name="bdsmatrix"; version="1.3-2"; sha256="16qhfwk0r1snm9hg32qwz7hizkpwc32m723hjm23m2026gvz2nwy"; depends=[]; };
-  bdvis = derive2 { name="bdvis"; version="0.2.18"; sha256="0m1nxq6bjinagmbkixkqdyx9s4vwggcihb33aqpixlm6vqcf7wyh"; depends=[chron ggplot2 lattice leafletR maps plotrix plyr sqldf taxize treemap]; };
+  bdsmatrix = derive2 { name="bdsmatrix"; version="1.3-3"; sha256="17ddvz4gnih7rx0lr1gzk280xyh6x796cf2x794dvplpiiq83skh"; depends=[]; };
+  bdvis = derive2 { name="bdvis"; version="0.2.20"; sha256="1iif70s17d9nh6bylm9s0ky70qx441n56h953gz4hxp7rb5dly31"; depends=[chron ggplot2 lattice leafletR maps plotrix plyr sqldf taxize treemap]; };
   bdynsys = derive2 { name="bdynsys"; version="1.3"; sha256="07gfyp0qwq9y1cnh7lhcz7q0b1s51cjwlbpll50l2cza2dszmf29"; depends=[caTools deSolve Formula Hmisc MASS matrixStats plm pracma]; };
-  bea_R = derive2 { name="bea.R"; version="1.0.2"; sha256="0zh5gaplkwp3mq0dpj6avjlgxbni05mzbh782kb230754nshr27h"; depends=[chron colorspace data_table DT ggplot2 googleVis gtable htmltools htmlwidgets httpuv httr jsonlite magrittr munsell plyr Rcpp scales shiny shinydashboard stringi stringr xtable yaml]; };
+  bea_R = derive2 { name="bea.R"; version="1.0.4"; sha256="16y2hgw9pi849hz6c280wj53ncbq442szp27kp9jpr21iy827298"; depends=[chron colorspace data_table DT ggplot2 googleVis gtable htmltools htmlwidgets httpuv httr jsonlite magrittr munsell plyr Rcpp scales shiny shinydashboard stringi stringr xtable yaml]; };
   beadarrayFilter = derive2 { name="beadarrayFilter"; version="1.1.0"; sha256="044dq5irc00v2f2gjz0vb69w7q7b84lppc55ganabdv4f0dxdblc"; depends=[beadarray RColorBrewer]; };
   beadarrayMSV = derive2 { name="beadarrayMSV"; version="1.1.0"; sha256="0785vmjsli37hjyppk7hlqmn0b683s1apysx9dghbw4h6rgvr8n9"; depends=[Biobase geneplotter limma rggobi]; };
   beanplot = derive2 { name="beanplot"; version="1.2"; sha256="0wmkr704fl8kdxkjwmaxw2a2h5dwzfgsgpncnk2p2wd4768jknj9"; depends=[]; };
   beanz = derive2 { name="beanz"; version="2.1"; sha256="0lnjaka2cmkgc7id8njclmmkjb22v6gz9bkncq5n6zidawrczqp0"; depends=[BH loo Rcpp RcppEigen rstan StanHeaders survival]; };
+  beast = derive2 { name="beast"; version="1.0"; sha256="1j4afp8cm6psxqidanvcfqrz6zy1klkzjkm7ia5w5qlvgll2micz"; depends=[RColorBrewer]; };
   bedr = derive2 { name="bedr"; version="1.0.4"; sha256="052sn90gjr34hjgyndzvcl66pv22q0kjqbx95y1pdydiwhwmhpa3"; depends=[data_table R_utils testthat VennDiagram yaml]; };
   beepr = derive2 { name="beepr"; version="1.2"; sha256="0w4szy3rgj1bdcanxbcb9agyw38jqp0hc7qsn7j9700vh20zqbln"; depends=[audio stringr]; };
   beeswarm = derive2 { name="beeswarm"; version="0.2.3"; sha256="0hy89bwv7jixlg91li1fywa77916am2whqp1m1fx1khd45g44581"; depends=[]; };
@@ -4367,7 +4464,7 @@ in with self; {
   benthos = derive2 { name="benthos"; version="1.3-4"; sha256="015p9wxykr2g29r95wdslw1d2klc9ps4wznjrv1rxm5mazdbb2wv"; depends=[dplyr lazyeval readr]; };
   ber = derive2 { name="ber"; version="4.0"; sha256="0gl7rms92qpa5ksn8h3ppykmxk5lzbcs13kf2sjiy0r2535n8ydi"; depends=[MASS]; };
   berryFunctions = derive2 { name="berryFunctions"; version="1.16.3"; sha256="0bwqp999niakmihhj4wp9q63bg4mr4gsygxzss0dl276q7ma8x5i"; depends=[abind]; };
-  bestNormalize = derive2 { name="bestNormalize"; version="0.2.2"; sha256="1rmmnfym6cz2rfy7f235vpfhgdnf9xm44wsll5y319bqm1llq176"; depends=[LambertW nortest]; };
+  bestNormalize = derive2 { name="bestNormalize"; version="1.0.1"; sha256="0mlvaa35nsp19154g894xvfd6wg99lwxnfissf8yykwfl7fb265x"; depends=[LambertW nortest]; };
   bestglm = derive2 { name="bestglm"; version="0.36"; sha256="1das1qnczgw46hrjplfhw00wqjd8gxqsdr9s4zmc3k8qlzhb3ych"; depends=[glmnet grpreg lattice leaps]; };
   betacal = derive2 { name="betacal"; version="0.1.0"; sha256="19wgpgf9yhckl9qx9v24f4yh055wfalphcxwm7lg68px6ap2pxl9"; depends=[]; };
   betafam = derive2 { name="betafam"; version="1.0"; sha256="1nf5509alqnr5qpva36f1wb7rdnc084p170h91jv89xvzsidqxca"; depends=[]; };
@@ -4382,16 +4479,15 @@ in with self; {
   bezier = derive2 { name="bezier"; version="1.1"; sha256="1bhqf1zbshkf1x8mgqp4mkgdxk9jxi51xj6i47kqkyn9gbdzch0c"; depends=[]; };
   bfa = derive2 { name="bfa"; version="0.4"; sha256="08n6446xl2w8z0rsqi6v2hp9cp744frxw6vrbxg5cpybhyyfzr36"; depends=[coda Rcpp RcppArmadillo]; };
   bfast = derive2 { name="bfast"; version="1.5.7"; sha256="0n75minka55rxpvs3qkj0c65ydn1gc3i8lkr2gdyn1adjkl5yn01"; depends=[forecast raster sp strucchange zoo]; };
-  bfp = derive2 { name="bfp"; version="0.0-35"; sha256="13jfbzijg087sva45bxzdnpz16l51mbszzh443nad23lym0w4bfg"; depends=[Rcpp]; };
+  bfp = derive2 { name="bfp"; version="0.0-38"; sha256="117rr680jjfn2xksqwhy7sx03cf5444jdgr9dzlr3bcc6pcxslx2"; depends=[Rcpp]; };
   bgeva = derive2 { name="bgeva"; version="0.3-1"; sha256="0qm4xknyab8hdyn3in2hsvm8s062cnmqqf41b5jvax1mi5hs0z8c"; depends=[magic mgcv trust]; };
   bglm = derive2 { name="bglm"; version="1.0"; sha256="1ln5clsfhpzjkm6cjil0lfqg687b0xxbvw1hcvangc0c0s314mrz"; depends=[mvtnorm]; };
   bgmfiles = derive2 { name="bgmfiles"; version="0.0.6"; sha256="10qldfjjq5fx5jrrakdxc8k2pf0vp8ifg18nq56lvx9n28mqigim"; depends=[]; };
   bgmm = derive2 { name="bgmm"; version="1.8.3"; sha256="09hsqjjyzlpl0fqb7832j5ydrr0yc42zb1c9q1y5hbrms7yp00p8"; depends=[car combinat lattice mvtnorm]; };
   bgsmtr = derive2 { name="bgsmtr"; version="0.1"; sha256="09h118msqf9yl2z7d6dsvgn4vrvy43ynznajj58k7gkxdlm1nimg"; depends=[coda EDISON Matrix mnormt mvtnorm sparseMVN statmod]; };
-  bhm = derive2 { name="bhm"; version="1.11"; sha256="1d35fvwk8v8b2x1knhsk5rz48hc5k9lkrxqd6y8p0gn63k5iy5ag"; depends=[coda survival]; };
+  bhm = derive2 { name="bhm"; version="1.13"; sha256="1iq1hjc7xn2kmmxgzv6mzcvvf48kqp5b8lavmzrqykak3v4z02nz"; depends=[coda survival]; };
   biasbetareg = derive2 { name="biasbetareg"; version="1.0"; sha256="1562zdin0y5mrp36ih11ir3h9cv49cx1l98chxd89fkj8x3c1fbg"; depends=[betareg]; };
-  bib2df = derive2 { name="bib2df"; version="1.0.0"; sha256="0qhhv23lr5ya3jhqrx4x5zx3bl0mrjlwd8i30lbinl7hlz50ahgr"; depends=[dplyr httr humaniformat stringr]; };
-  bibliometrix = derive2 { name="bibliometrix"; version="1.8"; sha256="1wzdyymmzikbkr41mw5s3srsvzh4zww8657r8i60dnf8dajgcryj"; depends=[factoextra FactoMineR ggplot2 igraph Matrix RColorBrewer rscopus SnowballC stringdist stringr]; };
+  bibliometrix = derive2 { name="bibliometrix"; version="1.9"; sha256="1yzdbh5h3fvc6agr551g9n10mlr72cbsrw9mpigfhxb953wvda54"; depends=[factoextra FactoMineR ggplot2 igraph Matrix RColorBrewer RISmed rscopus SnowballC stringdist stringr]; };
   bibliospec = derive2 { name="bibliospec"; version="0.0.4"; sha256="0abrbaw2knnlh8g5r4c2i6cc7a6ilfxry8zhscrx0x58irmp790b"; depends=[DBI RSQLite]; };
   bibtex = derive2 { name="bibtex"; version="0.4.2"; sha256="0wl3925ryd54g1nv3ncwllc493d39dpgy5md61940h69c0van1hz"; depends=[stringr]; };
   biclique = derive2 { name="biclique"; version="1.0.1"; sha256="0wxvqjxc11ccvfnlnnb6gv6r74a48pg3yabsjynrg1m2kbynnqjf"; depends=[]; };
@@ -4408,67 +4504,66 @@ in with self; {
   biganalytics = derive2 { name="biganalytics"; version="1.1.14"; sha256="1hsqdg5hkhs6z9pwvn055q02hzpksjwrf33q5zdnkm387g188ca6"; depends=[BH biglm bigmemory foreach Rcpp]; };
   biglars = derive2 { name="biglars"; version="1.0.2"; sha256="17zs25dvlja9ynx2fm5f4nmgkx4mnyqs5iscwsyahr6qigx1rz9x"; depends=[ff]; };
   biglasso = derive2 { name="biglasso"; version="1.3-6"; sha256="044l2l34l4pl7ijwgq569cn8x5clj795qpfwb1b9qfwvggvgzgni"; depends=[BH bigmemory Matrix ncvreg Rcpp RcppArmadillo]; };
+  bigleaf = derive2 { name="bigleaf"; version="0.3.0"; sha256="1y1z9hi23w0n374jvndr0prry7msp6lfzkwzdr7ivpi89af0h027"; depends=[robustbase]; };
   biglm = derive2 { name="biglm"; version="0.9-1"; sha256="1z7h4by457z93k5i6qf5rq7xmd1y2kcd1rq4pv465cd32d4mb2g1"; depends=[DBI]; };
-  bigmemory = derive2 { name="bigmemory"; version="4.5.31"; sha256="0wv0p746zz5a6r1yd0fgpj2kfcyzk2f4rxqz92p6lp9jzakv4lfs"; depends=[BH bigmemory_sri Rcpp]; };
+  bigmemory = derive2 { name="bigmemory"; version="4.5.33"; sha256="0ycl9dzm3drpyas625h34rir5bnbjlncxlvawfsfmqwcbmwdjdvj"; depends=[BH bigmemory_sri Rcpp]; };
   bigmemory_sri = derive2 { name="bigmemory.sri"; version="0.1.3"; sha256="0mg14ilwdkd64q2ri9jdwnk7mp55dqim7xfifrs65sdsv1934h2m"; depends=[]; };
   bigml = derive2 { name="bigml"; version="0.1.2"; sha256="0vl5krjbgckknxwl26b2hn63jhb80zbn7abpckhxzxfxzncpnfz9"; depends=[plyr RCurl RJSONIO]; };
   bigpca = derive2 { name="bigpca"; version="1.1"; sha256="09rd8ryar8wiih50s6b246jf0idmi62fsi7ljysx7j0jarj3jyhz"; depends=[biganalytics bigmemory bigmemory_sri irlba NCmisc reader]; };
   bigrquery = derive2 { name="bigrquery"; version="0.4.1"; sha256="07hi5z8l2qm9cjfc9y1y5vjijkkwmxq1dgz3bvv578kasz6yjs11"; depends=[assertthat DBI httr jsonlite progress readr]; };
   bigsplines = derive2 { name="bigsplines"; version="1.1-0"; sha256="0jjlv9qidn8xrz630wbyq7kz7vlxgaphv2y2siv90j01j5nj4s89"; depends=[quadprog]; };
-  bigstatsr = derive2 { name="bigstatsr"; version="0.2.2"; sha256="0x46csllfdiyr0krsiicvlcdkafh114r6iv71barah3sfib6rash"; depends=[BH cowplot doParallel foreach ggplot2 glue magrittr Matrix Rcpp RcppArmadillo RSpectra]; };
   bigstep = derive2 { name="bigstep"; version="0.7.4"; sha256="0g45fgnamdv1v3b8xvpsj4rzhisyvbbddwyzvzvmmi4a8w20pzn5"; depends=[bigmemory matrixStats R_utils RcppEigen speedglm]; };
   bigtabulate = derive2 { name="bigtabulate"; version="1.1.5"; sha256="1jvp3m0ms2cav9z8vvhh80gsa0kvc351brv2jq99rxv1mwvpa4xj"; depends=[BH biganalytics bigmemory Rcpp]; };
-  bigtcr = derive2 { name="bigtcr"; version="1.0"; sha256="1wh85r6f4jd8xzinczr5g1p1acbcyn4am3v1n4blfbn447l9nx4z"; depends=[]; };
+  bigtcr = derive2 { name="bigtcr"; version="1.1"; sha256="1l03yc28afdm7glbw4ay0zsywjgqg5l90qz1hfhslsy8gg7d5wq5"; depends=[]; };
   bigtime = derive2 { name="bigtime"; version="0.1.0"; sha256="136gy2i4qwa2drklllyzp3z0dbijlavgf3sxy73bf84df2yq1c9i"; depends=[corrplot lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; };
   bikedata = derive2 { name="bikedata"; version="0.1.0"; sha256="1vhjk8gbip4p6x0i4qw1m3wzic40v6qkj50zm6l44qgqcjkj699m"; depends=[BH DBI dodgr httr lubridate magrittr Rcpp reshape2 RSQLite tibble xml2]; };
   bikeshare14 = derive2 { name="bikeshare14"; version="0.1.0"; sha256="12399c01s8p9rmpi3fpy4rm7xxnsf627slz3h234frbahhs882c4"; depends=[]; };
   bild = derive2 { name="bild"; version="1.1-5"; sha256="03has1zi57inicahl52ja006vv5cdndyxfsxp77l6nc3zc6ixna8"; depends=[]; };
   billboard = derive2 { name="billboard"; version="0.1.0"; sha256="1z3y8dijhc1381y91n5zq305xzm1gpvs0g4mdpfr7zrblpa8ws39"; depends=[tibble]; };
-  billboarder = derive2 { name="billboarder"; version="0.1.0"; sha256="0apcjjwbhc0jd9li27dcjnjm2lswg0w4axcm9zgbhwj7na5mqrka"; depends=[ggplot2 htmlwidgets jsonlite magrittr]; };
+  billboarder = derive2 { name="billboarder"; version="0.2.1"; sha256="0xmkj6l3cpyyq23hp6jhfqllpg7gkksajnq25wyccqmypxjik8jv"; depends=[ggplot2 htmlwidgets jsonlite magrittr scales]; };
   bimetallic = derive2 { name="bimetallic"; version="1.0"; sha256="181qi4dr0zc7x6wziq7jdc1his20jmprfpq3hrfm56fr5n1sj8wl"; depends=[]; };
   bimixt = derive2 { name="bimixt"; version="1.0"; sha256="0nhszpzjqy8z3vngl5jdzqxzshnn92wgi0ci5n3n5kzi24xkfrzc"; depends=[pROC]; };
   binGroup = derive2 { name="binGroup"; version="1.1-0"; sha256="1sf7prg2x1ryynf1kz7jr50svmga7kjgd5pi9qm3g2hyimz8mvs4"; depends=[]; };
   binMto = derive2 { name="binMto"; version="0.0-6"; sha256="1h9s42wk848x15f4glhsh2iikpra64miwlia6xz5dqlzbs4vw86k"; depends=[mvtnorm]; };
   binaryGP = derive2 { name="binaryGP"; version="0.2"; sha256="0i4xi0gxk0lamjdygyx0azdp3kfqmva1g20nl3p65w4yx77m88d6"; depends=[GPfit lhs logitnorm nloptr Rcpp RcppArmadillo]; };
-  binaryLogic = derive2 { name="binaryLogic"; version="0.3.5"; sha256="1zaqwkrr1dyxsbfa3zvz1ciipmqddl932jkw9r00qmnhdh3ybpa6"; depends=[]; };
+  binaryLogic = derive2 { name="binaryLogic"; version="0.3.9"; sha256="19ig9qgjjnivfihjy41pc13qlrb95679mmk4zks5lbbri8qi4qxj"; depends=[]; };
   binda = derive2 { name="binda"; version="1.0.3"; sha256="15rhxnlif7agblzd09gyllkqkf5d8cc75b4vmp7grx8a6y7w47g0"; depends=[entropy]; };
   bindata = derive2 { name="bindata"; version="0.9-19"; sha256="15ya21fz1kvq4qsppkn9ypiqvaq8q4vszdcgcymampa7zc07z2ld"; depends=[e1071 mvtnorm]; };
   bindr = derive2 { name="bindr"; version="0.1"; sha256="0d95ifm0x4mrfzi20xf39f5pzd7rfzqsld0vjqf6xzga5rhnd8fc"; depends=[]; };
   bindrcpp = derive2 { name="bindrcpp"; version="0.2"; sha256="0l1l22zl87wiyl79m3gj2vlxmkhxvrkl4alhyy08h55q7hqs3vyh"; depends=[bindr plogr Rcpp]; };
-  binequality = derive2 { name="binequality"; version="1.0.2"; sha256="09gafmz77qbyci8ih8zag3l8a92qij8nyr8hw57ymcvnzafq5iad"; depends=[gamlss gamlss_cens gamlss_dist ineq survival]; };
+  binequality = derive2 { name="binequality"; version="1.0.3"; sha256="0hhcmw1mq785zylcxghfnazi3xvnl7sqpqll8fqdk064a4drqkw1"; depends=[gamlss gamlss_cens gamlss_dist ineq survival]; };
   binford = derive2 { name="binford"; version="0.1.0"; sha256="04mpdvynlm4gddybys04k0446gc9hyq0vaxr6a525p76ls5aw4b1"; depends=[]; };
   bingat = derive2 { name="bingat"; version="1.3"; sha256="1y68rgafipfad78yrzcygdszgy1d5q739kap06pzr78bn3i8hiwa"; depends=[doParallel foreach gplots matrixStats network vegan]; };
   binhf = derive2 { name="binhf"; version="1.0-1"; sha256="0l8925bj6mjv2y7fn76zh2g8xjig3kbbdy4jl0ip3gd9kbrakl9k"; depends=[adlift wavethresh]; };
   binman = derive2 { name="binman"; version="0.1.0"; sha256="103f74gm124vw4rwbfrd5dlgca3v83kqd8m5j9z3ma3snh788mkx"; depends=[assertthat httr jsonlite rappdirs semver xml2 yaml]; };
+  binnednp = derive2 { name="binnednp"; version="0.1.0"; sha256="0cfgz6828b2525dmph5n4zxdgkbx0nsrm4k2azhw1xfi3pz4z6ga"; depends=[fitdistrplus kedd mclust nor1mix Rcpp Rdpack]; };
   binom = derive2 { name="binom"; version="1.1-1"; sha256="0mjj92dqf5q69jxzqya4izb1mly3mkydbnmlm4wb3zqqg82a324c"; depends=[]; };
   binomSamSize = derive2 { name="binomSamSize"; version="0.1-5"; sha256="1an6dcqsjh5r0w4kc3n6yfvvha5qhrb2i4bpf7g5ykhl3i60zfcc"; depends=[binom]; };
-  binomTools = derive2 { name="binomTools"; version="1.0-1"; sha256="14594i7iapd6hy4j36yb88xmrbmczg8zgbs0b6k0adnmqf83bn4v"; depends=[]; };
   binomen = derive2 { name="binomen"; version="0.1.2"; sha256="0w1m5b2qvq3g28hahfgkq7wrrjqy43x1x4kvrrrf284s5ka90531"; depends=[dplyr jsonlite lazyeval]; };
   binomialcftp = derive2 { name="binomialcftp"; version="1.0"; sha256="00c7ymlxk1xnx3x1814x7bcyir7q5sy4rb82dcpzf2bdly4xa1qr"; depends=[]; };
   binomlogit = derive2 { name="binomlogit"; version="1.2"; sha256="1njz1g9sciwa8q6h0zd8iw45vg3i1fwcvicj5y8srpk8wqw3qp7k"; depends=[]; };
   binr = derive2 { name="binr"; version="1.1"; sha256="0kgk91zy7bdrhpkh9c5bi206y9hjwjwzb508i8qqmznqyxmza70r"; depends=[]; };
   binseqtest = derive2 { name="binseqtest"; version="1.0.3"; sha256="0661a2bqmv6bckq23c6m04ggwrp8z10lfgjg9dgkz4bfxsd297gs"; depends=[clinfun]; };
   binsmooth = derive2 { name="binsmooth"; version="0.1.0"; sha256="1zlw4zmkckg7rwf4hx8wyr2yl644xkdkazayysy99saysr9pk2c9"; depends=[ineq pracma triangle]; };
-  binst = derive2 { name="binst"; version="0.2.0"; sha256="13hg9kmxlaczbkbimlqphpimzx67kncc6qvnlk9cxqyvfkb0ph47"; depends=[]; };
+  binst = derive2 { name="binst"; version="0.2.1"; sha256="09kzk7n1j9nzgyijwirzk33z6p6hc67zkd05hv1i9qfijy31gci4"; depends=[rpart]; };
   bio_infer = derive2 { name="bio.infer"; version="1.3-3"; sha256="14pdv6yk0sk6v8g9p6bazbp7mr3wmxgfi6p6dj9n77lhqlvjcgm9"; depends=[]; };
   bio3d = derive2 { name="bio3d"; version="2.3-3"; sha256="0cw6nhkj5mxh89lfrnhrmv0rwxkmh05g6nd6rvd7ahcaxd3mid7l"; depends=[Rcpp]; };
   bioOED = derive2 { name="bioOED"; version="0.1.1"; sha256="18b66s5dn8a67iwb0g1bmbi856ip81yfa57m40kf7phsga52ncg1"; depends=[bioinactivation corrplot dplyr FME ggplot2 MEIGOR]; };
   bioPN = derive2 { name="bioPN"; version="1.2.0"; sha256="0mvqgsfc7d4h6npgg728chyp5jcsf49xhnq8cgjxfzmdayr1fwr8"; depends=[]; };
   biofiles = derive2 { name="biofiles"; version="1.0.0"; sha256="1bglgl2jcp6jy3f7xwndil56i98xx4kn518s3fqdixw7n5ibmqd2"; depends=[assertthat BiocGenerics Biostrings foreach GenomeInfoDb GenomicRanges IRanges iterators Rcpp RCurl reutils S4Vectors XVector]; };
-  biogas = derive2 { name="biogas"; version="1.8.1"; sha256="1q10q6mk8qzf6an52qhlps61zv8vwy0lcx3128zyn8p6b98ymy8d"; depends=[]; };
+  biogas = derive2 { name="biogas"; version="1.10.0"; sha256="1il4r71h2a0xqpjs7q97ypdd12jmdnh0kqcs6j5gpjxdsmgnhlsy"; depends=[]; };
   biogeo = derive2 { name="biogeo"; version="1.0"; sha256="14sqgg8b06gp5dajxvyj9s3ndsk7jpkfr0mkyl2l61kgp6qx53rh"; depends=[maptools raster sp stringr vegan]; };
   biogram = derive2 { name="biogram"; version="1.4"; sha256="1kkim6dxmvvpby2ir280adl14jmrz7nsib3m8g2ki81d539km6il"; depends=[bit combinat entropy partitions slam]; };
   bioimagetools = derive2 { name="bioimagetools"; version="1.1.0"; sha256="0ws99rx7bhqi448qqy08jsl3c4vbq96gigqb85yv1mzrc82sg62p"; depends=[EBImage httr tiff]; };
-  bioinactivation = derive2 { name="bioinactivation"; version="1.2.0"; sha256="149sh5m05xda6wq1ki3xfs9vp3vc9bpm9f5szf43kmzrzm92qjgn"; depends=[deSolve dplyr FME ggplot2 lazyeval MASS rlang]; };
-  biolink = derive2 { name="biolink"; version="0.1.2"; sha256="12hpd50swnij9jzc8m6bz7iwmndgwmlyj7vnd8hvnz1gc68bjs2p"; depends=[memoise rentrez xml2]; };
-  biomartr = derive2 { name="biomartr"; version="0.5.2"; sha256="1q1zizfixi7rcbigxmi1vk271b704z5lxnzph9cqa3zwsv1clfxb"; depends=[biomaRt Biostrings curl data_table downloader dplyr httr jsonlite RCurl readr stringr tibble XML]; };
+  bioinactivation = derive2 { name="bioinactivation"; version="1.2.1"; sha256="1dxpa549y6dqzmi8nk57x0blqmcz51v9hj0sy3g9laj9aj0rmyzz"; depends=[deSolve dplyr FME ggplot2 lazyeval MASS rlang]; };
+  biolink = derive2 { name="biolink"; version="0.1.3"; sha256="0cy9s9wg5rgwczqjfw6xp9ragqcj9gzp7icpm0nqwrdghsj7azjv"; depends=[DBI glue memoise rentrez RMySQL xml2]; };
+  biomartr = derive2 { name="biomartr"; version="0.7.0"; sha256="1gjl4xh9ryxsf3lhn4fqa3zw10yc0mwrfgkrbq117njsw988kms7"; depends=[biomaRt Biostrings curl data_table downloader dplyr httr jsonlite purrr RCurl readr stringr tibble XML]; };
   biomod2 = derive2 { name="biomod2"; version="3.3-7"; sha256="0mbf6j4m7vvq82l1grmznfqirj1ynr6jzzlpx0s2wjd3hdbvgzia"; depends=[abind dismo earth gbm ggplot2 MASS maxent mda nnet PresenceAbsence pROC randomForest raster rasterVis reshape rpart sp]; };
   bionetdata = derive2 { name="bionetdata"; version="1.0.1"; sha256="1l362zxgcvxln47b1vc46ad6ww8ibwhqr2myxnz1dnk2a8nj7r2q"; depends=[]; };
   bioplots = derive2 { name="bioplots"; version="0.0.1"; sha256="184wp1jvgf7a80srrfq72a4r1la2psr8b16kxs00v2gcbgjyvr10"; depends=[ggplot2 gplots RColorBrewer reshape2]; };
-  biorxivr = derive2 { name="biorxivr"; version="0.1.3"; sha256="1vi035c4jld5i52xnp79dn5642308cv11vfrw0n62wlsbjfbdma4"; depends=[XML]; };
   bios2mds = derive2 { name="bios2mds"; version="1.2.2"; sha256="1avzkbk91b7ifjba5zby5r2yw5mibf2wv05a4nj27gwxfwrr21cd"; depends=[amap cluster e1071 rgl scales]; };
   bioset = derive2 { name="bioset"; version="0.2.0"; sha256="1cv4sgmbvxghwa22qwvgp5zgbfcyhljsh6c6k7gakxsv0wz1xq46"; depends=[dplyr magrittr rlang tibble tidyr]; };
-  biosignalEMG = derive2 { name="biosignalEMG"; version="2.0.1"; sha256="1prdr0pa1vd190pqxr7y87sjy10icfj9wb7jc3r5q8qmk5lpnyq5"; depends=[signal]; };
+  biosignalEMG = derive2 { name="biosignalEMG"; version="2.1.0"; sha256="0bbkrfqkmks4z8c7rh0k43lvm71vn3fzrw3kpj012ym77whwkvay"; depends=[signal]; };
   biospear = derive2 { name="biospear"; version="1.0.1"; sha256="03wsyzlxmqff6xvr10jy49p229xr6jjvr8kk93wm7wil7q6b7z42"; depends=[cobs corpcor devtools glmnet grplasso MASS Matrix mboost pkgconfig plsRcox pROC PRROC RCurl survAUC survival]; };
   biotic = derive2 { name="biotic"; version="0.1.2"; sha256="1p18jkdd263dgk90626n9awkj6m4zn1n7897596fzrzrahksa978"; depends=[]; };
   biotools = derive2 { name="biotools"; version="3.1"; sha256="15y3ccmj1gslzc0lp0gvc66hf0yigx3zkqnw46crgrizjm2kmjay"; depends=[boot lattice MASS rpanel SpatialEpi tkrplot]; };
@@ -4486,14 +4581,13 @@ in with self; {
   bitrugs = derive2 { name="bitrugs"; version="0.1"; sha256="0sqgp05b902mdldr4ckz4knmkbsqvgl1vx0l792cn2r437yqlgp3"; depends=[]; };
   bivarRIpower = derive2 { name="bivarRIpower"; version="1.2"; sha256="0vgi0476rwali6k8bkp317jawzq5pf04v75xmycpmadb7drnpzy0"; depends=[]; };
   bivrp = derive2 { name="bivrp"; version="1.0"; sha256="0q00k24fssvjkgpndg84vdm7w9hswq593k6yjha4pl0a8bmnv6f8"; depends=[MASS]; };
-  biwavelet = derive2 { name="biwavelet"; version="0.20.11"; sha256="0fmk4b8gzbq0l4n08zq4pl1csaxxxi3hpqd886ccbhmg6zn8dz01"; depends=[fields foreach Rcpp]; };
   biwt = derive2 { name="biwt"; version="1.0"; sha256="1mb3x8ky3x8j4n8d859i7byyjyfzq035i674b2dmdca6mn7paa14"; depends=[MASS rrcov]; };
   bizdays = derive2 { name="bizdays"; version="1.0.4"; sha256="0vl9anlwvnnaiz67h256r386gy57fbbygjahsjaiaw8zrp84fj3p"; depends=[]; };
   bkmr = derive2 { name="bkmr"; version="0.2.0"; sha256="0dk6dn73bqlvwinn3aginls4533931xcr3h59k0w60yxs3v8yakv"; depends=[dplyr fields magrittr MASS nlme tidyr tmvtnorm truncnorm]; };
   blackbox = derive2 { name="blackbox"; version="1.1.7"; sha256="1qdj6wsgr623wnhc573krnhjx65d4k9y8i3n2l2lj1qpqd538ygw"; depends=[geometry lattice MASS nloptr numDeriv proxy rcdd Rcpp RcppEigen spaMM]; };
   blandr = derive2 { name="blandr"; version="0.4.3"; sha256="03w1k646izbrygcsynrzrph7crpqdqn58544mmm9zxfvkmsilpmi"; depends=[ggplot2 knitr]; };
   blastula = derive2 { name="blastula"; version="0.1"; sha256="0i306x0xm34r9fz7iq8frjbcvfbgg64fm5nn7mbk29a58kn91axp"; depends=[commonmark ggplot2 glue htmltools httr knitr magrittr mailR rJava stringr]; };
-  blavaan = derive2 { name="blavaan"; version="0.2-4"; sha256="1bjczm5i9q1h3i1sl5p31jv87hi9bj4b546fi4g338ljqqrzx6a5"; depends=[coda lavaan loo MASS MCMCpack mnormt nonnest2 runjags]; };
+  blavaan = derive2 { name="blavaan"; version="0.3-1"; sha256="1r5kararl5d8fk6zlawhyjpi1sc3xp1pd2cf83qmh9wbvdsfphwg"; depends=[coda lavaan loo MASS MCMCpack mnormt nonnest2 runjags]; };
   blendedLink = derive2 { name="blendedLink"; version="1.0"; sha256="19d1pnjag89jjvkl5a6wx531qjqp4cv5jk95md6jby27yr52r8vp"; depends=[]; };
   blender = derive2 { name="blender"; version="0.1.2"; sha256="1qqkfgf7fzwcz88a43cqr8bw86qda33f18dg3rv1k77gpjqr999c"; depends=[vegan]; };
   blighty = derive2 { name="blighty"; version="3.1-4"; sha256="1fkz3vfcnciy6rfybddcp5j744dcsdpmf7cln2jky0krag8pjzpn"; depends=[]; };
@@ -4505,14 +4599,14 @@ in with self; {
   blmeco = derive2 { name="blmeco"; version="1.1"; sha256="1hzg5dimzj1khygm9dv0y30mx1nf9vdhgicqdg1rvj7nf426h2ki"; depends=[arm lme4 MASS MuMIn]; };
   blob = derive2 { name="blob"; version="1.1.0"; sha256="05pazzcyz3c3vd2l70zq9cf172cgjff4dnf419zigfnxycyn1mhn"; depends=[tibble]; };
   blockTools = derive2 { name="blockTools"; version="0.6-3"; sha256="0023p0msfmp8swq4f5aff40m976np7y051x8hjizzw91hrfa4w2n"; depends=[MASS tibble]; };
-  blockcluster = derive2 { name="blockcluster"; version="4.2.3"; sha256="1b3rqpg3i5bplz85lxfspb1vv8l7qsxwkalnn0h5pwy9ppqdbcb7"; depends=[Rcpp rtkore]; };
+  blockcluster = derive2 { name="blockcluster"; version="4.2.6"; sha256="0dskcwdh89a24j1lr829p9rrs88l13738b1gvsmsqrcrg9z955xc"; depends=[Rcpp rtkore]; };
   blockmatrix = derive2 { name="blockmatrix"; version="1.0"; sha256="14k69ly4i8pb8z59005kaf5rpv611kk1mk96q6piyn1gz1s6sk6r"; depends=[]; };
   blockmodeling = derive2 { name="blockmodeling"; version="0.1.9"; sha256="1rd8ifwv5q9yl0ayzkgi0h4k79w3r46dr164l73iz1ny77a78fn9"; depends=[]; };
   blockmodels = derive2 { name="blockmodels"; version="1.1.1"; sha256="088629i4g63m8rnqmrv50dgpqbnxd1a4zl5wr3ga0pdpqhmd53wp"; depends=[digest Rcpp RcppArmadillo]; };
   blockrand = derive2 { name="blockrand"; version="1.3"; sha256="1090vb26w6s7iqjcal0xbb3qb6p6j46a5w25f1wjdppd1spvh7f9"; depends=[]; };
   blocksdesign = derive2 { name="blocksdesign"; version="2.7"; sha256="0pkkp1i6dsj4q4p6529qkbyy8mqmw9zhs1ww1y55yn1adkkwfd4z"; depends=[crossdes]; };
   blockseg = derive2 { name="blockseg"; version="0.2"; sha256="183hjb66589qqjwf14rzdmy770biad73r0l5pkh6f4xk9xac1r62"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2]; };
-  blogdown = derive2 { name="blogdown"; version="0.3"; sha256="1m17j5nwckfrhi9gjzin814y3r74834393s6dych0jrvw5xjp3d0"; depends=[bookdown htmltools httpuv knitr rmarkdown servr yaml]; };
+  blogdown = derive2 { name="blogdown"; version="0.5"; sha256="1i34vynvb496w638g0mip30vrxcx60nbr48g1nfkmgiw1nrvr8c5"; depends=[bookdown htmltools httpuv knitr rmarkdown servr xfun yaml]; };
   blsAPI = derive2 { name="blsAPI"; version="0.1.9"; sha256="1p7s799kix396fbx8ap9vy9akwpaps37awr18qbj53n9qcm74wkp"; depends=[RCurl rjson]; };
   blscrapeR = derive2 { name="blscrapeR"; version="3.1.1"; sha256="1s76d6511ifhh17dnwhrd8hzmfnb26qal68pn4v4smz35srgfa9j"; depends=[dplyr ggplot2 httr jsonlite magrittr purrr stringr tibble]; };
   bmd = derive2 { name="bmd"; version="0.5"; sha256="0d4wxyymycb416sdn272292l70s1h2m5kv568vakx3rbvb8y6agy"; depends=[drc]; };
@@ -4520,28 +4614,30 @@ in with self; {
   bmeta = derive2 { name="bmeta"; version="0.1.2"; sha256="19pm60xpmlanngq4nbibp0n5m98xw24b2xghz92ly31i3mkg2n68"; depends=[forestplot R2jags]; };
   bmixture = derive2 { name="bmixture"; version="0.5"; sha256="144nd1s18nyii135jfr2f65szyzw8hi4zg57z85dnmr2xwas22qb"; depends=[BDgraph]; };
   bmk = derive2 { name="bmk"; version="1.0"; sha256="1wxkrlrhmsxsiraj8nyiax9bqs834ln2swykmpf40wxspkykgfdq"; depends=[coda functional plyr]; };
-  bmlm = derive2 { name="bmlm"; version="1.3.4"; sha256="1d4gsriy5dm9yq8gdw8hz2k4fg8vsfchscfdygsq6h0wsbkch9xm"; depends=[BH ggplot2 Rcpp RcppEigen rstan StanHeaders]; };
+  bmlm = derive2 { name="bmlm"; version="1.3.5"; sha256="091yjllx4kfngaam1ac8rxcx547k7s7qa75pb5350qkr096pvsvs"; depends=[BH ggplot2 Rcpp RcppEigen rstan StanHeaders]; };
   bmmix = derive2 { name="bmmix"; version="0.1-2"; sha256="00php2pgpnm9n0mnamchi6a3dgaa97kdz2ynivrf38s0vca7fqx8"; depends=[ggplot2 reshape2]; };
+  bmotif = derive2 { name="bmotif"; version="1.0.0"; sha256="1zjwlsimihszg8gg7mvvi8xmzvlsdph9x6524gb28jmd24xb4gwj"; depends=[tensor]; };
   bmp = derive2 { name="bmp"; version="0.3"; sha256="0jd67r11bn98hjwgyr6gas423787xy7ji2hq7ay80blkkcj91xxx"; depends=[]; };
-  bmrm = derive2 { name="bmrm"; version="3.4"; sha256="1588nz3h05sss94sa1d87v5si7p3316canxc2dbbdqgv51ds377w"; depends=[LowRankQP lpSolve matrixStats]; };
-  bnclassify = derive2 { name="bnclassify"; version="0.3.3"; sha256="11c1sraxlz9sgyg6i257asmxx9pnf0qcblnjp0pwlh1r50h0z5wa"; depends=[assertthat entropy graph matrixStats RBGL rpart]; };
-  bnlearn = derive2 { name="bnlearn"; version="4.2"; sha256="1k9zfz8sc3ikrxp513cjgxw6fgxx9knz3wv5nikpcjmmrvlvwqya"; depends=[]; };
+  bmrm = derive2 { name="bmrm"; version="3.7"; sha256="1lv4bcjri95nh4yqcp9hd3ad90lcp2drh1dwfn99i3344yw196x2"; depends=[LowRankQP lpSolve matrixStats]; };
+  bnclassify = derive2 { name="bnclassify"; version="0.3.4"; sha256="0gjca802l3lvxy1ri8qff51mrgzj8ng0lk97kb4harvrsqx3i1wi"; depends=[assertthat entropy graph matrixStats RBGL rpart]; };
+  bnlearn = derive2 { name="bnlearn"; version="4.3"; sha256="11zp8vf79h5a6dyijazld199pzp1lsgk3x049ykgy0bqjx2ivfvq"; depends=[]; };
   bnnSurvival = derive2 { name="bnnSurvival"; version="0.1.5"; sha256="1d9jmfx0id4lmw122zga7hb52vlfdfqn4amhzpsmhyck99rv92j4"; depends=[pec prodlim Rcpp]; };
   bnormnlr = derive2 { name="bnormnlr"; version="1.0"; sha256="0l2r7vqikak47nr6spdzgjzhvmkr9dc61lfnxybmajvcyy6ymqs9"; depends=[mvtnorm numDeriv]; };
   bnpmr = derive2 { name="bnpmr"; version="1.1"; sha256="0hvwkdbs2p2l0iw0425nca614qy3gsqfq4mifipy98yxxvgh8qgc"; depends=[]; };
+  bnpsd = derive2 { name="bnpsd"; version="1.0.1"; sha256="0f9w3qcdmf6qx5k01vddmxj1vadx6d9zcgw6prpbmcf3cdy3fwg0"; depends=[]; };
   bnspatial = derive2 { name="bnspatial"; version="1.0.3"; sha256="018rb5wacjk8igyc0qbp9rk3vjz3lffx81awlba8d2npiaxq6jbv"; depends=[doParallel foreach gRain gRbase raster]; };
   bnstruct = derive2 { name="bnstruct"; version="1.0.2"; sha256="0n4gn1vhka694wdzignawyaca0rx2l0wjgw09fw42bkrswfjvxy1"; depends=[bitops igraph Matrix]; };
   boa = derive2 { name="boa"; version="1.1.8-2"; sha256="04lhqk5qfvaz1jk90glr2yi5vq7cdy0w8m6g2lnzk359l9y41zhp"; depends=[]; };
-  boclust = derive2 { name="boclust"; version="0.1.1"; sha256="1424w8714ymi81ipaf33mz8f2l3mqbqfskh0c67x0c5yf4kvrcw3"; depends=[d3heatmap DT genefilter ggplot2 psych reshape2 Rtsne shiny venn]; };
+  boclust = derive2 { name="boclust"; version="0.1.2"; sha256="0p6wx053yrq5cff2djqc341pj9q550b870rngspdlbqb0m4k6lr4"; depends=[d3heatmap DT genefilter ggplot2 psych reshape2 Rtsne shiny venn]; };
   bodenmiller = derive2 { name="bodenmiller"; version="0.1"; sha256="0gqrjscgq4qgk7yl32w0965yscc1py9klr49s8q8hkzyihlwzim2"; depends=[]; };
   boilerpipeR = derive2 { name="boilerpipeR"; version="1.3"; sha256="0467bjqhdmi3p02fp0r7rgm00x9ry464f2hniav990qzsw8i16q6"; depends=[rJava]; };
   bold = derive2 { name="bold"; version="0.5.0"; sha256="0gdmb3zsspcp594d32yzqhdpw4dwg7a3pfm7kgbghz368yw662gl"; depends=[crul data_table jsonlite plyr reshape stringr tibble xml2]; };
-  bomrang = derive2 { name="bomrang"; version="0.0.8"; sha256="0125h2wnp2h5izv2fxshs25vvvml6na5d9w994m6vndnlhvzb6rz"; depends=[curl data_table dplyr foreign httr janitor jsonlite magrittr rappdirs raster readr rgdal rlang rvest tidyr xml2]; };
-  bookdown = derive2 { name="bookdown"; version="0.5"; sha256="0zm63kr4f4kja4qpwkzl119zzyciqj7ihajfqgfjpgb4dzaiycxp"; depends=[htmltools knitr rmarkdown yaml]; };
+  bomrang = derive2 { name="bomrang"; version="0.1.1"; sha256="1r1k8ridclmlsbrwlrjh7syw4fy3q1hf2rpi2xssh7gg2n709cjb"; depends=[curl data_table dplyr foreign hoardr httr janitor jsonlite magrittr raster readr rgdal rvest tidyr xml2]; };
+  bookdown = derive2 { name="bookdown"; version="0.7"; sha256="1b3fw1f41zph5yw3kynb47aijq53vhaa6mnnvxly72zamyzdf95q"; depends=[htmltools knitr rmarkdown tinytex xfun yaml]; };
   bookdownplus = derive2 { name="bookdownplus"; version="1.3.2"; sha256="0vkivgjfmqy2xfs75w8ylkpgcvca294q61jrhbpg24vnll3c281n"; depends=[bookdown knitr yaml]; };
   boolean3 = derive2 { name="boolean3"; version="3.1.6"; sha256="00s6ljhqy8gpwa3kxfnm500r528iml53q364bjcl4dli2x85wa9p"; depends=[lattice mvtnorm numDeriv optimx rgenoud rlecuyer]; };
   boostSeq = derive2 { name="boostSeq"; version="1.0"; sha256="0sikyzhn1i6f6n7jnk1kb82j0x72rj8g5cimp2qx3fxz33i0asx6"; depends=[genetics lpSolveAPI]; };
-  boostmtree = derive2 { name="boostmtree"; version="1.2.0"; sha256="0sn22imcq8w9c1347d1pd680xlkh47s687100y6mh3xrwa1x5nsj"; depends=[nlme randomForestSRC]; };
+  boostmtree = derive2 { name="boostmtree"; version="1.2.1"; sha256="0k79zfkck1plcd51sk6i8n5qh7hpnhchkqqhjn460hf0rl2mcjab"; depends=[nlme randomForestSRC]; };
   boostr = derive2 { name="boostr"; version="1.0.0"; sha256="123ag8m042i1dhd4i5pqayqxbkfdj4z0kq2fyhxfy92a7550gib2"; depends=[foreach iterators stringr]; };
   boot = derive2 { name="boot"; version="1.3-20"; sha256="0ai1qpm0p4z07xr0dvag8sdn9jrxcwanrsk9khzmww094jvr1jxd"; depends=[]; };
   bootES = derive2 { name="bootES"; version="1.2"; sha256="0hcaw1v80zspdsy4wr464lmgq33807i2f6n2dc3r7qqwa80g4zz0"; depends=[boot]; };
@@ -4552,15 +4648,15 @@ in with self; {
   bootcluster = derive2 { name="bootcluster"; version="0.1.0"; sha256="1mx08p0csz06mq55bdg4vgnqa9khdgqrz4jnm48c24pg8rpaj98b"; depends=[cluster flexclust fpc mclust plyr sets]; };
   bootnet = derive2 { name="bootnet"; version="1.0.1"; sha256="1r5kbcycdlb8g4zs5vsrmcxl20a6x2kj47ybz6h1s83rqiylxg1b"; depends=[abind corpcor dplyr ggplot2 gtools huge igraph IsingFit IsingSampler Matrix mgm mvtnorm parcor qgraph relaimpo tidyr]; };
   bootruin = derive2 { name="bootruin"; version="1.2-4"; sha256="1gbvh99snchipf13kjhymcx60s2kni23y7lv8lhzd3d402grp68h"; depends=[]; };
-  bootsPLS = derive2 { name="bootsPLS"; version="1.0.3"; sha256="0jkpci97chbvlfkcbbj3gm2dnj5aiwfrh739kd4fa0zra4ac1adh"; depends=[mixOmics]; };
+  bootsPLS = derive2 { name="bootsPLS"; version="1.1.1"; sha256="0ypffscbv7l13kwbgvz18smfass49sqrmivnbb84qiq91wr5frnm"; depends=[mixOmics]; };
   bootspecdens = derive2 { name="bootspecdens"; version="3.0"; sha256="0hnxhfsc3ac4153lrjlxan8xi4sg1glwb5947ps6pkkyhixm0kc1"; depends=[MASS]; };
   bootstrap = derive2 { name="bootstrap"; version="2017.2"; sha256="08lmsy7k8wsgv89yc904c6fidcymr1ma2ry4fl0p69p21v4iiwa4"; depends=[]; };
   boottol = derive2 { name="boottol"; version="2.0"; sha256="01dps9rifzrlfm4lvi7w99phfi87b7khx940kpsr4m9s168a2dzv"; depends=[boot plyr]; };
-  boral = derive2 { name="boral"; version="1.4"; sha256="1risn5f48l5rmrx5pyifbrcbh92v94siqlwwiz2jljnhgsqgc1d4"; depends=[abind coda fishMod MASS mvtnorm R2jags]; };
+  boral = derive2 { name="boral"; version="1.5"; sha256="1h1vf4j8p1vmhhqsrrn8jn0gynxjvkykm7f4jpsiivkfh69b0w95"; depends=[abind coda fishMod MASS mvtnorm R2jags]; };
   bossMaps = derive2 { name="bossMaps"; version="0.1.0"; sha256="0w4ks1xicvfm8ari4fr18wjm0qj2nxdsapl6lpfjz8l1id0y78cg"; depends=[doParallel foreach ggplot2 raster rgdal rgeos scales sp tidyr]; };
   boussinesq = derive2 { name="boussinesq"; version="1.0.3"; sha256="1j1jarc3j5rby1wvj1raj779c1ka5w68z7v3q8xhzjcaccrjhzxk"; depends=[]; };
-  boxcoxmix = derive2 { name="boxcoxmix"; version="0.14"; sha256="06an4ci3iz2mlc7zhhjj7w10w10q8312lca1sv00m64bad4nxlnx"; depends=[qicharts statmod]; };
-  boxoffice = derive2 { name="boxoffice"; version="0.1.1"; sha256="19l65nxrj0q7vr5ds6cwf7ynaqzd3ivzx673svvl6wmxlgn67cfi"; depends=[foreach lubridate rvest xml2]; };
+  boxcoxmix = derive2 { name="boxcoxmix"; version="0.15"; sha256="0qvlk3kcvqzrak2rvf41fs8421fpfh3ch51rq0c9ac62x2dkfidh"; depends=[qicharts statmod]; };
+  boxoffice = derive2 { name="boxoffice"; version="1.0.1"; sha256="0s8zx6n203l2cszq4xrwvazpw1fl36g1cln8n9sh20vyqrdcbgvh"; depends=[rvest xml2]; };
   boxplotdbl = derive2 { name="boxplotdbl"; version="1.2.2"; sha256="01bvp6vjnlhc4lndxwd705bzlsh7zq0i9v66mxszrcz6v8hb9rwi"; depends=[]; };
   boxr = derive2 { name="boxr"; version="0.3.4"; sha256="0wx3x65rk1ma8bw5h4yskr7ii95ynkm7il22l1bj34kv9f4bfyj3"; depends=[assertthat bit64 digest dplyr httpuv httr mime rio stringr]; };
   bpa = derive2 { name="bpa"; version="0.1.1"; sha256="0np7q1nasrq4j7ssaipvbjgrsi9n612p9lp96frq1dgix95mcgf0"; depends=[magrittr plyr]; };
@@ -4569,15 +4665,15 @@ in with self; {
   bpkde = derive2 { name="bpkde"; version="1.0-7"; sha256="1ls6rwmbgb2vzsjn34r87ab8rnz3ls61g6f4x3jpglbk0j91f0h8"; depends=[]; };
   bpp = derive2 { name="bpp"; version="1.0.0"; sha256="11fgn92vvl7kklv0xdisf8gnf2rbhq11qyckqsxvc5wa821lmnkm"; depends=[mvtnorm]; };
   bqtl = derive2 { name="bqtl"; version="1.0-32"; sha256="0jjqgsm9fmvz5nkgz608xfljjpmaf4rs4f7kxvpqn4b1l9s5lhci"; depends=[]; };
-  braQCA = derive2 { name="braQCA"; version="0.9.9.6"; sha256="1xqy0vykxdp0kr87w1sq8yjqrj0y8xh64fr2y8l79763xkyxpn0y"; depends=[bootstrap dplyr QCA QCAGUI]; };
   braidReports = derive2 { name="braidReports"; version="0.5.3"; sha256="107c9lrzb55dw5pal8qqpn8is3nrh19vfngx3zcfpmc49f06kskq"; depends=[braidrm ggplot2]; };
   braidrm = derive2 { name="braidrm"; version="0.71"; sha256="1cn0rdlw775pmzbjmhny7gkm901a3qgz7infqb5s9az606xg54d3"; depends=[]; };
-  brainGraph = derive2 { name="brainGraph"; version="1.0.0"; sha256="0vphir0jyf21yyrsbfdjciyi9nb1ijkrkzdgqfnv1jxpvzk4g5zn"; depends=[abind ade4 boot cairoDevice data_table foreach ggplot2 Hmisc igraph oro_nifti permute plyr RcppEigen RGtk2 scales]; };
+  brainGraph = derive2 { name="brainGraph"; version="2.0.0"; sha256="016ck3fqwfzj6jhxkqqlsj5mv16fy8k72ykwvm2biy5pwgbapwsa"; depends=[abind ade4 boot cairoDevice data_table expm foreach ggplot2 ggrepel gridExtra Hmisc igraph MASS Matrix mediation oro_nifti permute RcppEigen RGtk2 scales]; };
   brainR = derive2 { name="brainR"; version="1.5.1"; sha256="0ih4vwy445ciyyvf8snm42vg7rzzf6vn9qkbhj0yyd8sy88mgyss"; depends=[misc3d oro_nifti rgl]; };
   brainwaver = derive2 { name="brainwaver"; version="1.6"; sha256="0r79dpd9bbbn34rm29512srzj3m29qgvbryvrp1mwv8mmcsh6ij6"; depends=[waveslim]; };
-  brant = derive2 { name="brant"; version="0.1-3"; sha256="1h6aygqcdn2wmxl8mgpq6w2rpr0asqw521i0bkgl37cwzc8sk3c0"; depends=[MASS]; };
+  brant = derive2 { name="brant"; version="0.2-0"; sha256="1hdwdrdl6ad112zd7q248am3qk19alnj647nrk9xxxgd7s6a9pnb"; depends=[MASS Matrix]; };
   brazilmaps = derive2 { name="brazilmaps"; version="0.1.0"; sha256="1nvd8x4m4m3966qph6390kqwpsrv7vy4yf6pam98xxkjbl9a41nf"; depends=[dplyr ggplot2 magrittr sf sp]; };
   brea = derive2 { name="brea"; version="0.2.0"; sha256="0mb043fdhxrg9gyf4g55ydjx37j20394nvd4d0fmiym98lccyi04"; depends=[]; };
+  breakDown = derive2 { name="breakDown"; version="0.1.3"; sha256="19vfwacbq7hvbsc42679pmd1d0n2d0m62k87qm157xmlbag6anv9"; depends=[ggplot2 ranger]; };
   breakage = derive2 { name="breakage"; version="1.1-1"; sha256="0zjazyz92criiimpz4wyd4hd8ccspvh3hhqpd4qkfdzdf9wp3kns"; depends=[Imap]; };
   breakaway = derive2 { name="breakaway"; version="3.0"; sha256="0y3h7gifv279z3x77jmr97c0i3vy58m5wsr8pa2vyn26m02rbkpc"; depends=[]; };
   breakfast = derive2 { name="breakfast"; version="1.0.0"; sha256="0p0svsqphd5w99pf5c5jmak1xxl8md881lapa8aps9xr73m4x6lf"; depends=[plyr]; };
@@ -4585,46 +4681,46 @@ in with self; {
   breathtestcore = derive2 { name="breathtestcore"; version="0.4.0"; sha256="04vi9rlb5lkml91jv55v3dyyqcjp9ly760sshpsv9lpbwq47ch7c"; depends=[assertthat broom dplyr ggfittext ggplot2 MASS multcomp nlme purrr readr readxl signal stringr tibble tidyr xml2]; };
   breathteststan = derive2 { name="breathteststan"; version="0.4.0"; sha256="13wqb33gvzmjpgzqyyadydz5hnqcran80azaxbixj7wga0c35pqq"; depends=[BH breathtestcore dplyr purrr Rcpp RcppEigen rstan StanHeaders stringr tibble tidyr]; };
   brew = derive2 { name="brew"; version="1.0-6"; sha256="1vghazbcha8gvkwwcdagjvzx6yl8zm7kgr0i9wxr4jng06d1l3fp"; depends=[]; };
-  brewdata = derive2 { name="brewdata"; version="0.4"; sha256="1i8i3yhyph212m6jjsij61hz65a5rplxw8y2xqf6daqiisam5q6i"; depends=[RCurl stringdist XML]; };
   brglm = derive2 { name="brglm"; version="0.6.1"; sha256="17r3az6za98v2r06aak77kypdaqssc9wxcc6m6vb20y7xm8dp1mp"; depends=[profileModel]; };
-  brglm2 = derive2 { name="brglm2"; version="0.1.5"; sha256="15y4gqw036jz3fylc8mcsc36s221mqpda6hrjwlsxilp6wahp9vj"; depends=[enrichwith lpSolveAPI MASS Matrix nnet]; };
+  brglm2 = derive2 { name="brglm2"; version="0.1.6"; sha256="02zahv1kssxwz9xhb1dpc1558rmgmbpgn62xic3yvn05sixn6y6j"; depends=[enrichwith lpSolveAPI MASS Matrix nnet]; };
   bride = derive2 { name="bride"; version="1.3"; sha256="03k9jwklg1l8sqyjfh914570880ii0qb5dd9l0bg0d0qrghbj0rk"; depends=[]; };
   bridgedist = derive2 { name="bridgedist"; version="0.1.0"; sha256="0hqkpwpi3nv6mfhljl65zcflf4wy72ag36hdam6s7kynfj41qz6w"; depends=[]; };
   bridger2 = derive2 { name="bridger2"; version="0.1.0"; sha256="0clp42nnbvd01n65azdi2ghp0mfqwsipzdl2d30q04lcvfkdpxrf"; depends=[BSDA data_table ggplot2 outliers plotly shiny shinydashboard]; };
-  bridgesampling = derive2 { name="bridgesampling"; version="0.3-0"; sha256="17ncqfx2k5f2l63ha9c0n77nqdciykl58wjapciqqqz8l76nnka7"; depends=[Brobdingnag coda Matrix mvtnorm scales stringr]; };
+  bridgesampling = derive2 { name="bridgesampling"; version="0.4-0"; sha256="1gv2h2wgj1ym7qpmxmj5s3q2xsz217ijwdx70qnh4ijvacsvaxwm"; depends=[Brobdingnag coda Matrix mvtnorm scales stringr]; };
   briskaR = derive2 { name="briskaR"; version="0.1.1"; sha256="0w614lb94vim6wlzj13gnfgkq0vg9fjlvwvvs11pnqq501qn2hzl"; depends=[deldir fftwtools fields MASS mvtnorm pracma raster rgdal rgeos sp]; };
   brlrmr = derive2 { name="brlrmr"; version="0.1.5"; sha256="14dnmh062fw11bm236ilaqs6ss4ywajvsk3sxj0zwqk2bjf7y7vh"; depends=[boot brglm MASS profileModel Rcpp]; };
   brm = derive2 { name="brm"; version="1.0"; sha256="0h4kgig28hkqv1amadznc0n9256dx613rxbn8s8si11ygx79x2dd"; depends=[]; };
-  brms = derive2 { name="brms"; version="1.10.2"; sha256="0v5jlrfvkgzlldgki4v2kybcr6j9nda38sg2m4cgmcqsjp120vcl"; depends=[abind bayesplot bridgesampling coda ggplot2 loo Matrix matrixStats mgcv nlme Rcpp rstan rstantools shinystan]; };
+  brms = derive2 { name="brms"; version="2.1.0"; sha256="1ahm539add6g26vfj8szmpcwkhnkjcqqqq35mfryrp94yslb6a8n"; depends=[abind bayesplot bridgesampling coda ggplot2 loo Matrix matrixStats mgcv nleqslv nlme Rcpp rstan rstantools shinystan]; };
   brnn = derive2 { name="brnn"; version="0.6"; sha256="0q3f3cbl89hgpav7bn54s13cysgz8fi0zm8byc9rgz0sqkjrxval"; depends=[Formula]; };
-  broman = derive2 { name="broman"; version="0.65-4"; sha256="0cmcyifp49c1m3sawcs5ijjl218wk4sffvr68dfi3y9vh58f5iss"; depends=[assertthat ggplot2 jsonlite RPushbullet]; };
+  broman = derive2 { name="broman"; version="0.67-4"; sha256="1jv1543zq74zjdrmhkcrjwxhn9bmsmmwadd9rjnn18svnrbnlq0g"; depends=[assertthat ggplot2 jsonlite RPushbullet]; };
   broom = derive2 { name="broom"; version="0.4.3"; sha256="119pc2jnxvm13cvd77c7d14p3bn68f4jm310vj3yfck40101n9if"; depends=[dplyr nlme plyr psych reshape2 stringr tidyr]; };
-  brotli = derive2 { name="brotli"; version="1.0"; sha256="0sicqwri8rxqxwhj4z8ckfls2yz09jwb9c5pjk5dhxrsyh85k80m"; depends=[]; };
+  brotli = derive2 { name="brotli"; version="1.1"; sha256="1jdhc03ycafjm6zfl9m95pd3krkb94mq2lhfjchfjc876mbam8x6"; depends=[]; };
   brr = derive2 { name="brr"; version="1.0.0"; sha256="050ivnqcaxiyypd1sxfpy6ianhzzmvs6c77ga40g3440cvfigkgw"; depends=[gsl hypergeo pander stringr SuppDists TeachingDemos]; };
   brranching = derive2 { name="brranching"; version="0.2.0"; sha256="0y99px2m02rl60qgf6pjbjv6isp8v1w9sny6p2icgsx4bwxjxmns"; depends=[ape curl httr phytools taxize]; };
   brt = derive2 { name="brt"; version="1.1.0"; sha256="11a6zpdml5vz3kcdcajw5zcck1zbp4kfdkqm3y6q7qj8ym2f12q5"; depends=[ggplot2]; };
   bsam = derive2 { name="bsam"; version="1.1.2"; sha256="1m2lpqm2i4i35hzr1iylrb8skx8rsys3w542xjyqw030bs7b1rdk"; depends=[coda dplyr ggplot2 gridExtra lubridate msm mvtnorm rjags rworldxtra sp tibble]; };
-  bsamGP = derive2 { name="bsamGP"; version="1.1.1"; sha256="0lk5m5c1s5zj0f8ivyj86jiyldvyhw8qq42ivl71y3qcxg6z8q1h"; depends=[ggplot2 gridExtra MASS]; };
+  bsamGP = derive2 { name="bsamGP"; version="1.1.2"; sha256="037xgkmcli24jiqahxcingyx97q0jci2ahahcpn3xbzixa161rvf"; depends=[ggplot2 gridExtra MASS]; };
   bsearchtools = derive2 { name="bsearchtools"; version="0.0.61"; sha256="11fqz8kdhqpc3jq34vgv3frzawgsl5y0s83rb2p54yb5yhd3p68w"; depends=[Rcpp]; };
   bshazard = derive2 { name="bshazard"; version="1.0"; sha256="151c63pyapddc4z77bgkhmd7rsa1jl47x8s2n2s8yc6alwmj6dvs"; depends=[Epi survival]; };
   bspec = derive2 { name="bspec"; version="1.5"; sha256="0jynvir7z4q1vrvhdn6wijdrjfrkk4544nlawabw2fnfxss91a91"; depends=[]; };
   bsplinePsd = derive2 { name="bsplinePsd"; version="0.1.0"; sha256="1sicbrammayy56fa72jjygxiqxri93kglpyalhm30llsdm4jic33"; depends=[Rcpp]; };
   bsplus = derive2 { name="bsplus"; version="0.1.0"; sha256="1hpjrmsn66brf1hpwfmg55jbpwbhvkz7sbr160z1cgq3hdhqm7r8"; depends=[htmltools lubridate magrittr purrr rmarkdown stringr]; };
   bspmma = derive2 { name="bspmma"; version="0.1-1"; sha256="0bd6221rrbxjvabf1lqr9nl9s0qwav47gc56sxdw32pd99j9x5a9"; depends=[]; };
-  bssm = derive2 { name="bssm"; version="0.1.2"; sha256="03jkwwl5impwdanilfrciypbqj57maalivdf37nssjlzcqdj2ywj"; depends=[BH coda diagis ggplot2 ramcmc Rcpp RcppArmadillo sitmo]; };
+  bssm = derive2 { name="bssm"; version="0.1.4"; sha256="0wrai7s5sdjykiz8c5qrlcscm1awfz9cjaggarrs83h9fcs3n38x"; depends=[BH coda diagis ggplot2 ramcmc Rcpp RcppArmadillo sitmo]; };
   bssn = derive2 { name="bssn"; version="0.7"; sha256="1g2xhb7bqapwd5zbc4bl4h1fskd7k6gd0rz74hnydiiwxrwiihf6"; depends=[sn]; };
   bst = derive2 { name="bst"; version="0.3-14"; sha256="02rnnv3f89329kw81a1v88wjzrfjshqjijw5hp3zyydcsfa3j088"; depends=[doParallel foreach gbm rpart]; };
   bsts = derive2 { name="bsts"; version="0.7.1"; sha256="07bnhh82abagphfp6y40wchmgb10h2l5lnqc7am50arfa324blrh"; depends=[BH Boom BoomSpikeSlab xts zoo]; };
   btb = derive2 { name="btb"; version="0.1.14"; sha256="0nk76ddsg8pjd35y2yqw27iammk948i29xmr0ha9l8b867693m44"; depends=[Rcpp sp]; };
-  btergm = derive2 { name="btergm"; version="1.9.0"; sha256="03xqzavq3n1zcsfagkprn30i4k11cv1145ni0i8x0jij5dwn7av9"; depends=[boot coda ergm ggplot2 igraph Matrix network ROCR RSiena sna speedglm statnet statnet_common texreg xergm_common]; };
+  btergm = derive2 { name="btergm"; version="1.9.1"; sha256="1bvq6v35fpfd4vhbq1c5jb4gg3iyfflbv0n89gv4hzm80xx50rs9"; depends=[boot coda ergm ggplot2 igraph Matrix network ROCR RSiena sna speedglm statnet statnet_common texreg xergm_common]; };
   btf = derive2 { name="btf"; version="1.2"; sha256="110p7rk43g48yrnr6c9xkyzsh3kqdywsvi23dav89hl7sxahrf75"; depends=[coda Matrix Rcpp RcppEigen]; };
-  bucky = derive2 { name="bucky"; version="1.0.3"; sha256="07zw73pq3si97nsvjdd8jvh7k92vkzzkcb9aallgcqbamfy0sd1q"; depends=[lmtest sandwich]; };
+  bucky = derive2 { name="bucky"; version="1.0.4"; sha256="1irzv1ib40h0ijlpawp0lac572nik3x77xcdi1vyncvinc9pcmr8"; depends=[lmtest sandwich]; };
   bujar = derive2 { name="bujar"; version="0.2-3"; sha256="0gc5wrnhark1gawl4qqjh179xaxjal5r7qq4ilx30yn3qhzrqdaz"; depends=[bst earth elasticnet gbm mboost mda modeltools mpath rms]; };
   bulletr = derive2 { name="bulletr"; version="0.1"; sha256="181rnrp62almf08gr41qnrnq8qnbqraqdvj4zixdh8fachsq2imp"; depends=[dplyr ggplot2 plotly plyr reshape2 robustbase smoother xml2 zoo]; };
+  bullwhipgame = derive2 { name="bullwhipgame"; version="0.1.0"; sha256="03nwf2v4zhgkxvkghpkbkxz0cnkqcwwl51ykrk25qciakfqkgfws"; depends=[shiny]; };
   bunchr = derive2 { name="bunchr"; version="1.2.0"; sha256="1b8hdg2x26k0ahx4gxdpzr36hy056939r4496q3vbgyd4bbk2fbd"; depends=[shiny]; };
   bundesligR = derive2 { name="bundesligR"; version="0.1.0"; sha256="0dnhbh9jh7dfbk7mfh8msq4ys5kakalr0kwkycycrb2q8rd049vp"; depends=[]; };
-  bupaR = derive2 { name="bupaR"; version="0.3.0"; sha256="0732h95pv8a235qvaydfaziwbq0q2gxmn4ffh7n1ar4azkgc94l3"; depends=[data_table dplyr magrittr miniUI purrr shiny]; };
-  burnr = derive2 { name="burnr"; version="0.2.1"; sha256="138n52rwlkkxpbrz65cfcv9rp4vp4c17w9ydpqfk9fa8b3sqhhsn"; depends=[ggplot2 MASS plyr reshape2]; };
+  bupaR = derive2 { name="bupaR"; version="0.3.2"; sha256="08xkf88fx8wn22vzn2ghm1jagh09pafqgmx41k99vrqkl3nrfm58"; depends=[data_table dplyr forcats glue magrittr miniUI purrr rlang shiny tidyr]; };
+  burnr = derive2 { name="burnr"; version="0.2.2"; sha256="1b5ys0jm2dmiz1jd5f3907dhv44wh60kmfdfhj3fzx8rk7zllm06"; depends=[ggplot2 MASS plyr reshape2]; };
   bursts = derive2 { name="bursts"; version="1.0-1"; sha256="172g09d1vmwl83xs6gr4gfblqmx3apvblpzdr5d7fcw1ybsx0kj6"; depends=[]; };
   bvarsv = derive2 { name="bvarsv"; version="1.1"; sha256="1bv4fbbi8bn7sqqpjlf8w5jpgydjr15wv5v9940wc42yk792yjrx"; depends=[Rcpp RcppArmadillo]; };
   bvenn = derive2 { name="bvenn"; version="0.1"; sha256="1xrya49w5bd2b7plfxpqla60b2828rkm0rjmc4qnqzvrahsbal0y"; depends=[]; };
@@ -4638,6 +4734,7 @@ in with self; {
   cAIC4 = derive2 { name="cAIC4"; version="0.2"; sha256="13sp3wywv82wgi1vsbxwn68v9xigy0fi3mcwyxjmmgmnsxns2fza"; depends=[lme4 Matrix]; };
   cIRT = derive2 { name="cIRT"; version="1.2.1"; sha256="1i43pqlyzykyd1a6abg1yi7ai9ay7d2jkvnw1sa4c6q07jk56d89"; depends=[Rcpp RcppArmadillo]; };
   cOde = derive2 { name="cOde"; version="0.3"; sha256="1r49q7qansn86wrxbhxqnn1dccd9av4lh4h5pn9kk42pls9q60nf"; depends=[Rcpp RcppArmadillo]; };
+  cRegulome = derive2 { name="cRegulome"; version="0.1.0"; sha256="0yf5kx583k483rs3vw614qfv92k3c8gld8vsw16j1vlsbrasbiah"; depends=[DBI dplyr ggplot2 ggridges httr magrittr purrr R_utils reshape2 RSQLite tidyr UpSetR VennDiagram]; };
   cSFM = derive2 { name="cSFM"; version="1.1"; sha256="1znxsqa8xdifmryg7jiqbpzm837n4n862kg5x1aki52crc4zyk3k"; depends=[MASS mgcv mnormt moments sn]; };
   ca = derive2 { name="ca"; version="0.70"; sha256="0730c7nk49hz0k1i5nnhq2j3wbhrlhr1qvb50mk8vmqkbhb1pz1l"; depends=[]; };
   caRpools = derive2 { name="caRpools"; version="0.83"; sha256="10m7fw1zfr9i6v2qg235diwf3fmfr88incxnqpvnhmqcn082mxrp"; depends=[biomaRt DESeq2 rmarkdown scatterplot3d seqinr sm VennDiagram xlsx]; };
@@ -4652,16 +4749,17 @@ in with self; {
   calibrar = derive2 { name="calibrar"; version="0.2.0"; sha256="1544bc5rhhc6d1mky7ngza00wwh63q07dkbzlwfgyavly8m9cplb"; depends=[cmaes foreach optimx]; };
   calibrate = derive2 { name="calibrate"; version="1.7.2"; sha256="010nb1nb9y7zhw2k6d2i2drwy5brp7b83mjj2w7i3wjp9xb6l1kq"; depends=[MASS]; };
   calibrator = derive2 { name="calibrator"; version="1.2-6"; sha256="1arprrqmczbhc1gl85fh37cwpcky8vvqdh6zfza3hy21pn21i4kh"; depends=[cubature emulator]; };
-  callr = derive2 { name="callr"; version="1.0.0"; sha256="05gp4y69ixajvmhrh1qrn5cnzj9jhfdxrfxnm2l2xfisfa680mic"; depends=[]; };
+  callr = derive2 { name="callr"; version="2.0.2"; sha256="0m51p39vfwldxv6h8x4y9w3laf8q9bldhfqhlcrlx3xhy3irb1bp"; depends=[assertthat crayon debugme R6 testthat]; };
   calmate = derive2 { name="calmate"; version="0.12.1"; sha256="07sjbq7bcrhal52pdzsb5pfmk6a8a44wg8xn79sv4y5v74c5xaqz"; depends=[aroma_core MASS matrixStats R_filesets R_methodsS3 R_oo R_utils]; };
   camel = derive2 { name="camel"; version="0.2.0"; sha256="0krilird8j69zbll96k46pcys4gfkcnkisww138wslwbicl52334"; depends=[igraph lattice MASS Matrix]; };
   camsRad = derive2 { name="camsRad"; version="0.3.0"; sha256="06gar6qan1ka01ngjvbpcv649yvfga697mplwn1x6qnfr4ngb7cs"; depends=[httr xml2]; };
   camtrapR = derive2 { name="camtrapR"; version="0.99.9"; sha256="1kzy90mwmpn2yb47xp5b8s3lj8lbkg8hfw44pwfb54gqf7wi2lkm"; depends=[overlap rgdal ritis secr sp taxize]; };
+  cancensus = derive2 { name="cancensus"; version="0.1.7"; sha256="0v3wbmdqg36zn30kgj5xbndz69x3vvr0i6ag57gz8sbbgc4nyqbr"; depends=[digest dplyr httr jsonlite rlang]; };
   cancerGI = derive2 { name="cancerGI"; version="1.0.0"; sha256="1chkcyf9m98gbn6b3vmb1baw7kii4g5vxvg2xfi7i6wwdn8sqr65"; depends=[igraph qvalue reshape2 survival systemfit]; };
   cancerTiming = derive2 { name="cancerTiming"; version="3.1.8"; sha256="1sfi8q2f5ag7iak0sf9pmqncb89w3gnxdiwjwpivkwhr28ais4mq"; depends=[gplots LearnBayes]; };
   candisc = derive2 { name="candisc"; version="0.8-0"; sha256="0hq5bwvq791rhff2c29xdjbbkcyydii1lbsy05c1fapyn88ir0mi"; depends=[car heplots]; };
-  canprot = derive2 { name="canprot"; version="0.1.0"; sha256="0g3sqc81qw8jx6v2p6makclccnvhshimwlhk2cabq20rfs8npgbm"; depends=[CHNOSZ colorspace xtable]; };
-  canvasXpress = derive2 { name="canvasXpress"; version="1.17.4"; sha256="1n7ar61fzadjsq13jxf3157w7qnk4dhg7vdc3kwaasaygam6i5xc"; depends=[htmlwidgets magrittr]; };
+  canprot = derive2 { name="canprot"; version="0.1.1"; sha256="14g7wl4p9bgwf5jm48mp676z0pwlsd2xgxjwzixri7mxxh0ivfh1"; depends=[CHNOSZ xtable]; };
+  canvasXpress = derive2 { name="canvasXpress"; version="1.18.5"; sha256="052qwymd28pi4c5pkdrwb85r1f1342y46fpirz2mrspx9r877d7h"; depends=[htmlwidgets]; };
   cape = derive2 { name="cape"; version="2.0.2"; sha256="0ngm9scd3f2zcy7gy0lqk05cgbfrhhcss3mj5g6bj0byhgwd7msn"; depends=[corpcor doParallel evd fdrtool foreach HardyWeinberg igraph Matrix qpcR RColorBrewer regress shape]; };
   caper = derive2 { name="caper"; version="0.5.2"; sha256="1l773sxmh1nyxlrjz8brnwhwraff826scwixrqmgdciqk7046d35"; depends=[ape MASS mvtnorm]; };
   capm = derive2 { name="capm"; version="0.11.0"; sha256="1yw7h1r5m4md8yv0fn1j4wxvhwybifqyvrn8ip3fl32kxbwsmnvz"; depends=[deSolve FME ggplot2 maptools reshape2 rgdal shiny sp survey]; };
@@ -4676,7 +4774,7 @@ in with self; {
   cardidates = derive2 { name="cardidates"; version="0.4.7"; sha256="0dxb2941w56s479laf315hqh9iv3k2l1ds7k8hdl9akcacagjgs2"; depends=[boot lattice pastecs]; };
   cardioModel = derive2 { name="cardioModel"; version="1.4"; sha256="1a2nvn4a4zc89pb01m20pxqgbj0ypzzvx9w2vfzwly1kzkhvc9hr"; depends=[lubridate nlme]; };
   care = derive2 { name="care"; version="1.1.10"; sha256="00h36by40v60mqzbf615a99sdfz0i42i57wybxrcm7y1y2la0da8"; depends=[corpcor]; };
-  caret = derive2 { name="caret"; version="6.0-77"; sha256="05c504567s2nppzfgi36mhszbym2pr80nf50dgxcxfx030721v5y"; depends=[foreach ggplot2 lattice ModelMetrics nlme plyr recipes reshape2 withr]; };
+  caret = derive2 { name="caret"; version="6.0-78"; sha256="0h1nxzii2h80aslp1zsjczrlfmaks44sskabk4yq9c5rafc7ka6y"; depends=[foreach ggplot2 lattice ModelMetrics nlme plyr recipes reshape2 withr]; };
   caretEnsemble = derive2 { name="caretEnsemble"; version="2.0.0"; sha256="0v9gyp81abrbm8b79ch927iqh0v84q5222bvg1wx8n65vx59sx42"; depends=[caret data_table digest ggplot2 gridExtra lattice pbapply plyr]; };
   carfima = derive2 { name="carfima"; version="1.0.0"; sha256="0bxk254q916w5h5zyyp2bs6nvbmbzqfx3jr4a80fkgbmr49chzzp"; depends=[DEoptim invgamma MASS numDeriv truncnorm]; };
   caribou = derive2 { name="caribou"; version="1.1"; sha256="0ibl3jhvsgjfcva0113z0di9n5n30bs90yz0scckfv1c0pjhn4xd"; depends=[]; };
@@ -4688,7 +4786,7 @@ in with self; {
   caschrono = derive2 { name="caschrono"; version="2.0"; sha256="091zqin2cr9p50zmifrb52dxy10zflm7f0lr9nissy589qjdd0gk"; depends=[Hmisc zoo]; };
   caseMatch = derive2 { name="caseMatch"; version="1.0.7"; sha256="1xd7mlnknjrilxcp0w0b36aaiql6jdqgyin1823r2x8vl9r4aqns"; depends=[]; };
   casebase = derive2 { name="casebase"; version="0.1.0"; sha256="0216qzyxv44cl9f806lal9lx4n0zzr9csx8ggyjva04h5iiqrq6w"; depends=[data_table ggplot2 survival VGAM]; };
-  castor = derive2 { name="castor"; version="1.2.2"; sha256="0kcl8967flj4bqrj9wb75mipq3z037hw3z02yj1bi39gzzj6ymg7"; depends=[naturalsort Rcpp]; };
+  castor = derive2 { name="castor"; version="1.3.2"; sha256="0pz02wbm9w3mkp2gmnl92zgv1b63dvcp6j374hqjgxxpc79aw30m"; depends=[naturalsort Rcpp]; };
   cat = derive2 { name="cat"; version="0.0-6.5"; sha256="1gv7chqp6kccipkrxjwhsa7yizizsmk4pj8672rgjmpfcc64pqfm"; depends=[]; };
   catIrt = derive2 { name="catIrt"; version="0.5-0"; sha256="09010z1q96nbnpys6mybspaqy57lvgd2cvwgnfijzgx3kl87pwnl"; depends=[numDeriv]; };
   catR = derive2 { name="catR"; version="3.13"; sha256="1xzxgf9d33h46qxz6a8d71mi673yzdnvxcxj073z7y19hjss3pkw"; depends=[]; };
@@ -4699,19 +4797,20 @@ in with self; {
   cate = derive2 { name="cate"; version="1.0.4"; sha256="0qck6675xm5xbw440m1b6n38wjwk7izx3s0zpxbmhc9wh12c5prk"; depends=[corpcor esaBcv leapp MASS ruv sva]; };
   catenary = derive2 { name="catenary"; version="1.1.1"; sha256="0gd46zvd51xvra0d7k7qdcmfl71vcfk750lcafkhmr4cg0vkqcz7"; depends=[boot ggplot2]; };
   cati = derive2 { name="cati"; version="0.99.1"; sha256="0sg6qagv1wiygylgygjfn7v4n99ifaaa34qvaspmm9b4fyfcxqa5"; depends=[ade4 ape e1071 FD geometry hypervolume mice nlme rasterVis vegan]; };
-  catlearn = derive2 { name="catlearn"; version="0.4"; sha256="1bpmvbpa6qab40ajmy64hg6f3zh3yifqj0rfqyk0b9f9jpdqxz9h"; depends=[Rcpp]; };
+  catlearn = derive2 { name="catlearn"; version="0.5"; sha256="12sl1jlnn8669via3fbslbqs3f34andwsizkllpiw0b6k9z2yid6"; depends=[doParallel foreach Rcpp]; };
   catmap = derive2 { name="catmap"; version="1.6.4"; sha256="18449qh10jxfi8p49gmbnib5y013nfdgdblbs4n0mfs0nnzb10sx"; depends=[forestplot metafor]; };
   catnet = derive2 { name="catnet"; version="1.15.3"; sha256="1dgqrn1lz57pwb5pca0mlvcmw9piy9xgf6fs0y2lsy4qxa9k0plk"; depends=[]; };
   catspec = derive2 { name="catspec"; version="0.97"; sha256="1crry0vg2ijahkq9msbkqknljx6vnx2m88bmy34p9vb170g9dbs1"; depends=[]; };
+  cattonum = derive2 { name="cattonum"; version="0.0.1"; sha256="04vayxycv9w5ssw69gifb1y15jkz294wia5s386wyz3bz0sf3fn6"; depends=[rlang tidyselect]; };
   causalMGM = derive2 { name="causalMGM"; version="0.1.1"; sha256="13qx71rfc6m7mvlpwma7ks09f3mlxknxw3jlv3b4iq5pjs8f1v5r"; depends=[rJava]; };
   causaldrf = derive2 { name="causaldrf"; version="0.3"; sha256="16gqx8b8alwm8a4lm69qamnqr3bg2qbz0d6q4lyqyrwsk12grid6"; depends=[mgcv survey]; };
-  causaleffect = derive2 { name="causaleffect"; version="1.3.5"; sha256="12acm5k1nx6axhxfsiqwyaplfl5z8zzjr3kwk1hdzdrmxni6vhxs"; depends=[ggm igraph XML]; };
+  causaleffect = derive2 { name="causaleffect"; version="1.3.6"; sha256="1kk68qlps0r40f3v4lb7njzg81igjp10jfinncxnn7gwyx58px83"; depends=[ggm igraph XML]; };
   causalsens = derive2 { name="causalsens"; version="0.1.1"; sha256="1z92ckqa07ajm451wrldxx9y43nawlvj2bsz0afxc9mrhjwjg5dh"; depends=[]; };
   cba = derive2 { name="cba"; version="0.2-19"; sha256="0nyssc7j5rkv1gcgx4cg31hwc37wd5k3yn9s2k22ffxlnrknss2l"; depends=[proxy]; };
   cbanalysis = derive2 { name="cbanalysis"; version="0.2.0"; sha256="0h0h8krlb6rckjpcw0jbbr8pcy3jm0cszimbm56l0ca668kiix06"; depends=[]; };
   cbar = derive2 { name="cbar"; version="0.1.3"; sha256="1jy52qnpjvszdd8xviv3vr00ds6bah73q0mhd4kixf68jafnxd35"; depends=[Boom bsts dplyr ggplot2 magrittr]; };
   cbird = derive2 { name="cbird"; version="1.0"; sha256="0kzylylk46swd7f0j6kjyrcs3plbx9799q9kb8hjxmgh0qcjk2p6"; depends=[]; };
-  cbsodataR = derive2 { name="cbsodataR"; version="0.2.1"; sha256="0nsg0fzaqhzv8r2lwz5xlybwgv25c0a2hid91ky95yaqvnjrp6mq"; depends=[jsonlite whisker yaml]; };
+  cbsodataR = derive2 { name="cbsodataR"; version="0.2.5"; sha256="1dc4hbida1fbxin22paa31c0f4xj1pqzcc4649p7lbygqvf1fhqh"; depends=[httr jsonlite whisker yaml]; };
   ccChooser = derive2 { name="ccChooser"; version="0.2.6"; sha256="1vgp4zhg46hcf9ma2cmwgnfrqkmq1arh0ahyzjpfk3817vh7disc"; depends=[cluster]; };
   ccRemover = derive2 { name="ccRemover"; version="1.0.4"; sha256="1npd0vx2hyg7qbwd650987i49v5cxr6i1hlj5rw6fxc0b808s596"; depends=[]; };
   ccaPP = derive2 { name="ccaPP"; version="0.3.2"; sha256="166spwqsqbp42mr1acglydlxspcpn8vhnim8r3s9m81sa9pmazpj"; depends=[pcaPP Rcpp RcppArmadillo robustbase]; };
@@ -4721,13 +4820,13 @@ in with self; {
   cccrm = derive2 { name="cccrm"; version="1.2.1"; sha256="180hzxm4z91hh008lysq1f0zky7qngg5z1laa1c119g4rqqcdskl"; depends=[gdata nlme]; };
   ccda = derive2 { name="ccda"; version="1.1"; sha256="0ya9x1b41l0pjyyfdswjyip0c2v8z7gncbj7cdz0486ad75229x7"; depends=[MASS]; };
   ccdrAlgorithm = derive2 { name="ccdrAlgorithm"; version="0.0.4"; sha256="192pfsk6yw26b6f23qgkxslsfwpav8zv6js46i61vj2wa10f4mf2"; depends=[Rcpp sparsebnUtils]; };
+  ccfa = derive2 { name="ccfa"; version="1.0.0"; sha256="0hhrcckiig1qfj7qb04jdmm7bwk9a17y6fn7ldxbmmw8546ad7md"; depends=[BMisc formula_tools ggplot2 pbapply quantreg TempleMetrics tidyr]; };
   ccgarch = derive2 { name="ccgarch"; version="0.2.3"; sha256="0angffla3sk9i86v6bbsav95fp3mz5yvq7qfv0fx2v0nd2cx116w"; depends=[]; };
   cchs = derive2 { name="cchs"; version="0.4.0"; sha256="1dahiyn3rj65w56hmhqdxvxh7vkjy5rxlkp1l59aq5iba21ldsyj"; depends=[survival]; };
   cclust = derive2 { name="cclust"; version="0.6-21"; sha256="1n5hh0017bcq8ck52qq89jm9zgdfpmiksrypsnv2vvhk3nr0s91c"; depends=[]; };
   ccmm = derive2 { name="ccmm"; version="1.0"; sha256="0855nr74xxpy7in2vrw15g8pv7nm1374irc1c5hikr5hadk5pf8v"; depends=[MASS]; };
   cctools = derive2 { name="cctools"; version="0.1.1"; sha256="1baqijxg75wr90y38d5g1gg8jmpz8ji7zv51wp9n1knif27rg348"; depends=[qrng Rcpp RcppArmadillo]; };
-  cda = derive2 { name="cda"; version="2.0.0"; sha256="1vq90z6kafiz5b884hxsz3lg8a0zis1n475lmvwlymcam5rpgjrc"; depends=[randtoolbox Rcpp RcppArmadillo reshape2 statmod]; };
-  cdata = derive2 { name="cdata"; version="0.5.0"; sha256="0jliwy73wag6jiahdx0kkpxbkjmjl6aa4wm6j8hnv8xz47m78x99"; depends=[DBI RSQLite wrapr]; };
+  cdata = derive2 { name="cdata"; version="0.5.2"; sha256="0l0vqmvizvb7h31796yjbyd0wspxvl3zx64xarkqpq8vwqwkfv51"; depends=[DBI RSQLite wrapr]; };
   cdb = derive2 { name="cdb"; version="0.0.1"; sha256="1rdb4lacjcw67apdyiv7cl1xvv9d1mrzck1qk605n6794k7wf2ys"; depends=[bitops]; };
   cdcfluview = derive2 { name="cdcfluview"; version="0.7.0"; sha256="00yc3q28y20l2ppqxy6h53p9fvwhvpkc8m7csmp2lizqh787i2cc"; depends=[dplyr httr jsonlite MMWRweek purrr readr sf units xml2]; };
   cdcsis = derive2 { name="cdcsis"; version="1.0"; sha256="1fxdsaqpjhpffn2fxddfcrx8wxwyvfws6rxkpp57g25980xiyzkd"; depends=[ks]; };
@@ -4741,10 +4840,9 @@ in with self; {
   ceg = derive2 { name="ceg"; version="0.1.0"; sha256="01la7kv0a3inc9vy5x010ysicfiv404bqfgs8csvqixviap9rd74"; depends=[graph Rgraphviz]; };
   celestial = derive2 { name="celestial"; version="1.4.1"; sha256="0cvfka5lj0sj9cd7xs68szhckzfm6cgxwxim1nd530s6gxh0l7kz"; depends=[NISTunits pracma RANN]; };
   cellVolumeDist = derive2 { name="cellVolumeDist"; version="1.3"; sha256="00hq3nbfbnmg2lhrqd0glkh5ld50fv54ll3q6v875d1lgs44sln1"; depends=[gplots minpack_lm]; };
-  cellWise = derive2 { name="cellWise"; version="1.0.0"; sha256="1cpkz256z6ngqdd1wa0ajyjcl0j1xln2f0hwsw24wfzgb8sdj6ac"; depends=[ggplot2 gridExtra matrixStats reshape2 scales]; };
+  cellWise = derive2 { name="cellWise"; version="2.0.8"; sha256="1xahayqlpylysdiqggzqh7z75r3ldi79bx124ky84r1vab659lm7"; depends=[ggplot2 gridExtra matrixStats Rcpp RcppArmadillo reshape2 scales]; };
   cellranger = derive2 { name="cellranger"; version="1.1.0"; sha256="16fgi3annn34c3cxi0pxf62mmmmxi21hp0zzlv7bkfsjqy4g4f2x"; depends=[rematch tibble]; };
   cem = derive2 { name="cem"; version="1.1.17"; sha256="1jnhsrc1jhax3zlw9ynla7g9z5i4w01iar7f7hmv92kp1cwh8rbd"; depends=[combinat lattice MatchIt nlme randomForest]; };
-  cems = derive2 { name="cems"; version="0.4"; sha256="0mk02m702xfr1gh0l3973z1hdpncgjl2vfd1k1iss5s64k56gs4q"; depends=[plotrix rgl vegan]; };
   cenGAM = derive2 { name="cenGAM"; version="0.5.3"; sha256="0qic2g2bq24k9jimxdk8g7bsmi4br2r6159ipdhh5ym81ji3sf5p"; depends=[mgcv]; };
   censCov = derive2 { name="censCov"; version="1.0-0"; sha256="0i9vmyi12f1m5xnrl4cxk3z9qv7ymzxsyf4gbnpg1ph63yfnhv3g"; depends=[survival]; };
   censNID = derive2 { name="censNID"; version="0-0-1"; sha256="1ij5ci6nkqf0rq51vyh4jw5sr3y46yndfkjmwl78ppdj66axxir5"; depends=[]; };
@@ -4753,49 +4851,52 @@ in with self; {
   census = derive2 { name="census"; version="0.2.0"; sha256="02qlmifppnfxw7bzh0zngih8z8qz0sxpsi38h7bv324vxx94gvz2"; depends=[ggmap RCurl]; };
   censusGeography = derive2 { name="censusGeography"; version="0.1.0"; sha256="1ncgd05ml571g3vy1g4p5xxg2bm08hbb6d5r3hpz7frn7w3l8l1d"; depends=[qdapTools]; };
   censusapi = derive2 { name="censusapi"; version="0.2.1"; sha256="1ax1lwnw9978iss8j1hpmbnp8pbsz8rppz37cyfn0m7xnpg9mq8b"; depends=[httr jsonlite]; };
-  censusr = derive2 { name="censusr"; version="0.0.3"; sha256="0lcji62kzdxaslvvp54bwfdmbx69lds7inmvywlj0plfqg1kvsid"; depends=[dplyr httr stringr]; };
+  censusr = derive2 { name="censusr"; version="0.0.4"; sha256="1n9571fyr46wj1dcxc2xgns9865655yzlq7yfz8im014wh0ycwqc"; depends=[dplyr httr stringr]; };
   censys = derive2 { name="censys"; version="0.1.0"; sha256="0r0yvaidn0qn96hx461415hywsjfgaz9wvvdssx7w97v2ndnk9sy"; depends=[httr jsonlite purrr stringi]; };
   centiserve = derive2 { name="centiserve"; version="1.0.0"; sha256="1m6gqz2rk7023340laa5pc0ncbfka2qi9ajvh65fwijd7xvv3n5c"; depends=[igraph Matrix]; };
   cents = derive2 { name="cents"; version="0.1-41"; sha256="03ycbd0c8b7danbblaixg6sm7msr9ixkanqswczqa8n2frhjfgj0"; depends=[]; };
   cepR = derive2 { name="cepR"; version="0.1.0"; sha256="1yqny6vgsjbrfxlk965pyk38n87ylf4513kbaljmgggrlyaz0qap"; depends=[dplyr httr magrittr purrr tibble]; };
   cepp = derive2 { name="cepp"; version="1.7"; sha256="01hvm6586xnb1crvk7brqh3dm2j44ia5lrl5swnf6pb682yskbq0"; depends=[randtoolbox trust]; };
+  cepreader = derive2 { name="cepreader"; version="1.1-2"; sha256="0pyycacsnbqz7hyrvrwwmmphrhny0byyxv66fwrvcsk3s88a7crf"; depends=[]; };
   cernn = derive2 { name="cernn"; version="0.1"; sha256="0gz2x20pgsiq85hwkkpg4s1cdlw9plygx0446djc7qsymp469p2w"; depends=[]; };
   cetcolor = derive2 { name="cetcolor"; version="0.1.0"; sha256="013ghlfs27a585851cir5fxgxhi41h48irq90932y55npa8gwdak"; depends=[]; };
   cfa = derive2 { name="cfa"; version="0.10-0"; sha256="12z58y4ls9m58wpj1xa4ir2p2apzxaskps05sxy2946m24i71zfk"; depends=[]; };
   cffdrs = derive2 { name="cffdrs"; version="1.7.6"; sha256="00n3h2vf855anxh0xgsps7sv0kj819864wjdmkiak1lsacysav8s"; depends=[data_table doParallel foreach raster rgdal spatial_tools]; };
   cg = derive2 { name="cg"; version="1.0-3"; sha256="1kbyal1sicbr10yvxpwgcij710kqpi23vmndp9kyfzn3k8zfird3"; depends=[Hmisc lattice MASS multcomp nlme rms survival VGAM]; };
   cgAUC = derive2 { name="cgAUC"; version="1.2.1"; sha256="172f9rkfhv4xzwpw8izsnsdbcw9p3hvxhh0fd8hzlkil7vskr3k8"; depends=[Rcpp]; };
-  cgam = derive2 { name="cgam"; version="1.8"; sha256="17pw2z5609lfsmz59mp5wwbcvb7zqrpp04iggn4nx0l0wxxbfr96"; depends=[coneproj Matrix svDialogs]; };
-  cgdsr = derive2 { name="cgdsr"; version="1.2.6"; sha256="05q26g7gflq4hsd3xa5xkjc3mhvml7i6dzamfwm0i14kxigghqp8"; depends=[R_methodsS3 R_oo]; };
+  cgam = derive2 { name="cgam"; version="1.9"; sha256="0hc8q6mdd8fy2229biknissmg95b88kryr4c33yv5j77z6gw3s4y"; depends=[coneproj Matrix svDialogs]; };
+  cgdsr = derive2 { name="cgdsr"; version="1.2.10"; sha256="1xyhw7mhmjichr1l6f9y1qvfj9wm87kfbm87ji7lcwf36gxh5g23"; depends=[R_methodsS3 R_oo]; };
   cggd = derive2 { name="cggd"; version="0.8"; sha256="06z0mrxxc02parn9vkjv89qq4yqmsccsy319fi6c5iarssyvin1r"; depends=[]; };
   cgh = derive2 { name="cgh"; version="1.0-7.1"; sha256="1fgjz43bgnswlyvrm669x697lybq3jyzz4l8ppgxqwxp4p4d2yqn"; depends=[]; };
   cghFLasso = derive2 { name="cghFLasso"; version="0.2-1"; sha256="0b1hnjf9g0v47hbz0dy9m6jhcl1ky20yyhhmm8myng2sndcpjsbf"; depends=[]; };
   cghRA = derive2 { name="cghRA"; version="1.6.0"; sha256="16dlw27s8wckc75xcwc2g74pw6bar0y0ii3h53w1hql05d4f7sb8"; depends=[DNAcopy Rgb]; };
-  cghseg = derive2 { name="cghseg"; version="1.0.2-1"; sha256="0q9ks19r21b6p0gfd7mnsgp7pbihz3yzmbzijlrx178f1z9yjx5q"; depends=[]; };
-  cgwtools = derive2 { name="cgwtools"; version="3.0"; sha256="01888n056x4c8g0676jnbh6d89hamzxrh33aw6r28mzlnmfy5lmw"; depends=[]; };
+  cgmanalysis = derive2 { name="cgmanalysis"; version="1.3"; sha256="0fb93czybl9rpndvz3lykfiwksa154vdrmils8c8l688c62gyq55"; depends=[gdata pracma zoo]; };
   changepoint = derive2 { name="changepoint"; version="2.2.2"; sha256="1jbki95pck10phpxna0b4i79hhl912zqi5ii9mjqb673y64dszkj"; depends=[zoo]; };
   changepoint_np = derive2 { name="changepoint.np"; version="0.0.2"; sha256="03i4l59h8cr6bizbqn288x9r85kvaz1dyhkv5fsj1189qpdi9m88"; depends=[changepoint zoo]; };
   changepointsHD = derive2 { name="changepointsHD"; version="0.3.0"; sha256="05zmypz2jz55m9avzg63dmp7fpcgi7jpc9vf2fv0kywcvf2wz5ym"; depends=[Rcpp RcppArmadillo]; };
+  changepointsVar = derive2 { name="changepointsVar"; version="0.1.0"; sha256="0kj9m9jik1dm5fx4c4hb559f5irpl1mvxk4wwajd5577a2fdqxb5"; depends=[lars MASS]; };
   charlatan = derive2 { name="charlatan"; version="0.1.0"; sha256="1q5ybipi6b0lzpis53rxsfa0mlkp3c9zmcw5fwq5h93vlrdf6986"; depends=[R6 tibble whisker]; };
   cheb = derive2 { name="cheb"; version="0.3"; sha256="0vqkdx7i40w493vr7xywjypr398rjzdk5g410m1yi95cy1nk4mc7"; depends=[]; };
   chebpol = derive2 { name="chebpol"; version="1.3-1789"; sha256="1505zdzvc9drw7n8qw5jmqligjgp5gwwki4wlk8dsm0p3p06dvd2"; depends=[]; };
   checkarg = derive2 { name="checkarg"; version="0.1.0"; sha256="0rkdjs2c4yx9laqgayxz57bwxhwgdh6ndrr4i3b1kh31lcmk1xc6"; depends=[]; };
   checkmate = derive2 { name="checkmate"; version="1.8.5"; sha256="1q6igk50lq4fp5d3imgcn1j063h3gsp214ra4nlf534hf4wjlkg9"; depends=[backports]; };
-  checkpoint = derive2 { name="checkpoint"; version="0.4.2"; sha256="1j7rsg14n3n27l4rmbpd5x0v3ak04sk1z65r6zxq1if173izmjrk"; depends=[]; };
+  checkpoint = derive2 { name="checkpoint"; version="0.4.3"; sha256="0r7v7ijyq92yd95ssxxbdlp5dv1sd09yvxr8c0yihf48kzw65s63"; depends=[]; };
+  checkr = derive2 { name="checkr"; version="0.0.2"; sha256="04gj2smibvkanglxv8vby4gwj9wfq44a8zclqvimp5hfb0ay12ny"; depends=[]; };
   cheddar = derive2 { name="cheddar"; version="0.1-631"; sha256="0s6v3xcpv8ppgx6q6h2hgrjcf3f3i87kmylnr9q9zhry7729aiyn"; depends=[]; };
   chemCal = derive2 { name="chemCal"; version="0.1-37"; sha256="1sbmr8arczc65nzbgr5rfk2mbbnk6h60ni9cd9jngbhgdf0g1scw"; depends=[]; };
   chemmodlab = derive2 { name="chemmodlab"; version="1.0.0"; sha256="0lzibshhfz52m61xldf0xq4cc1xx64fjlw18hlkiv65dj3gcj2mh"; depends=[caret class e1071 elasticnet foreach lars MASS nnet pls pROC randomForest rpart tree]; };
   chemometrics = derive2 { name="chemometrics"; version="1.4.2"; sha256="0shqns0n964pfwnd0q5sadglrlpgs4g5fbv45fsj9p37l4pq61dp"; depends=[class e1071 lars MASS mclust nnet pcaPP pls robustbase rpart som]; };
-  cherry = derive2 { name="cherry"; version="0.6-11"; sha256="0ixrzbzg559h0qb33b9158rk6w6as2b34b7iq5vzm429cpyzl7l8"; depends=[bitops lpSolve Matrix slam]; };
+  cherry = derive2 { name="cherry"; version="0.6-12"; sha256="1b74wlvjqxa532gxs400m1k4qs7xwpdap9ms60nlcwr7x1857mk6"; depends=[bitops lpSolve Matrix]; };
   chi = derive2 { name="chi"; version="0.1"; sha256="1y91mwahj4j2wz0y5k5vdpq7ygq834h8jkn37n74lqnwvv1968rr"; depends=[]; };
   chi2x3way = derive2 { name="chi2x3way"; version="1.1"; sha256="13qc8sigiw4gcxk8y50q7yfgzbssjyl41fizzjqzcp3p14kpsmzw"; depends=[]; };
+  childhoodmortality = derive2 { name="childhoodmortality"; version="0.2.0"; sha256="1kdxb02xryc46p7q39gpvn1gwkkrr0rr398i9zxizpxaxvn0r6ql"; depends=[matrixStats plyr]; };
   childsds = derive2 { name="childsds"; version="0.6.7"; sha256="1m5w0wbdk032b6d6h1704wji84yckyl427bja0mb4vqp28m99z48"; depends=[boot class dplyr gamlss gamlss_dist magrittr purrr reshape2 tibble tidyr]; };
-  chillR = derive2 { name="chillR"; version="0.66"; sha256="1qw9l3drw3r4an1jy2bckaslwla3s5fvpqr7ahvd2m6alx05b0k6"; depends=[fields httr Kendall pls raster readxl RMAWGEN sp XML]; };
-  chinese_misc = derive2 { name="chinese.misc"; version="0.1.7"; sha256="1asv4538p42r8mhvkcp0f2h75nq3bwm0v5arwc7masdmpp4fqayn"; depends=[jiebaR Matrix NLP Ruchardet slam stringi tm]; };
+  chillR = derive2 { name="chillR"; version="0.70.2"; sha256="01hn2b88ra7kadjylj2y840lpkapm93kdracnamy15c6f5f27kmb"; depends=[fields httr Kendall pls raster RCurl readxl RMAWGEN sp XML]; };
+  chinese_misc = derive2 { name="chinese.misc"; version="0.1.8"; sha256="0c2qhdia7wpkv4x2qnq2lyvgnr0n37brd7m579hcl6zq7dw4y2m7"; depends=[jiebaR Matrix NLP Ruchardet slam stringi tm]; };
   chipPCR = derive2 { name="chipPCR"; version="0.0.8-10"; sha256="1mff7n7ga4sfwvcq7zkjkrl68nybnm2zkn37hmxvnw9yl3ls9lnw"; depends=[lmtest MASS outliers ptw quantreg Rfit robustbase shiny signal]; };
-  chngpt = derive2 { name="chngpt"; version="2017.10-9"; sha256="1vi71nkjn4rmhg5xrfniy29lhgpmn2zbifvgynmsh950lfs08i9h"; depends=[boot kyotil MASS survival]; };
+  chngpt = derive2 { name="chngpt"; version="2018.1-3"; sha256="0x4jifap8y4gs7mdzawxyvfdfjg245zak2zljdl6351ppslzaj6z"; depends=[boot kyotil MASS survival]; };
   choiceDes = derive2 { name="choiceDes"; version="0.9-1"; sha256="07nnqqczi9p3cffdijzx14sxhqv1imdakj7y94brlr5mbf5i4fl4"; depends=[AlgDesign]; };
-  cholera = derive2 { name="cholera"; version="0.2.1"; sha256="0w213qlnkwbs7y1z5kmxicrbimkqlws46w12vadghf96rn1pb4fv"; depends=[deldir HistData igraph pracma RColorBrewer scales sp]; };
+  cholera = derive2 { name="cholera"; version="0.3.0"; sha256="08ijini3d4ir26di655315lvs9vjscixpawv8r7499idcb1jz87i"; depends=[alphahull deldir HistData igraph KernSmooth pracma RColorBrewer scales sp]; };
   choplump = derive2 { name="choplump"; version="1.0-0.4"; sha256="0fn6m3n81jb7wjdji4v04m53gakjfsj3ksm546xxz5zm7prk237s"; depends=[]; };
   chopthin = derive2 { name="chopthin"; version="0.2.2"; sha256="1ixmgq6igd2ji88qba7scny1j8rrizcf76dk4ymk3hah5dln97fz"; depends=[Rcpp]; };
   chords = derive2 { name="chords"; version="0.95.4"; sha256="1v6zvl1mv9fyf6hx1fpbj3i7s893n4y1w4j9rw1arps006qz2jqn"; depends=[MASS Matrix]; };
@@ -4804,24 +4905,26 @@ in with self; {
   choroplethrMaps = derive2 { name="choroplethrMaps"; version="1.0.1"; sha256="0ghqb2d1h0qkbcsll6ck2qk5sfvdwsrlh3phlbsjbak30832j7fr"; depends=[]; };
   chromer = derive2 { name="chromer"; version="0.1"; sha256="0fzl2ahvzyylrh4247w9yjmwib42q96iyhdlldchj97sld66c817"; depends=[data_table dplyr httr]; };
   chromoR = derive2 { name="chromoR"; version="1.0"; sha256="1x11byr6i89sdk405h6jd2rbvgwrcvqvb112bndv2rh9jnrvcw4z"; depends=[gdata haarfisz]; };
-  chron = derive2 { name="chron"; version="2.3-51"; sha256="05aznigw9nwv3hbwjnjbvqhfjqkwsw2csgrjx8500gzr2fvla5w8"; depends=[]; };
+  chron = derive2 { name="chron"; version="2.3-52"; sha256="185lfp75cv3l4cavg64sccj8lgc5sivch13n6gkannv3pd5cyzy4"; depends=[]; };
+  chunkR = derive2 { name="chunkR"; version="1.1.0"; sha256="1yq37dyc0k00w3579wcw314zdjbr9ybzb2ih8mpbznz4li2pa2br"; depends=[Rcpp]; };
   chunked = derive2 { name="chunked"; version="0.4"; sha256="0pqk6nnxxnlsw9zal62ajjalrlmvkdrzyz2l8r10jd7s61vhra40"; depends=[DBI dplyr LaF lazyeval]; };
-  ciTools = derive2 { name="ciTools"; version="0.2.1"; sha256="0cbxgn6825rfnjj2rrr9gzh6bwlp8wbh258b3y702z7g3v32dgg8"; depends=[arm boot dplyr lme4 magrittr MASS tibble]; };
-  cifti = derive2 { name="cifti"; version="0.4.2"; sha256="1l7dfq53plisyf244l1ch0il0ziy1qcxv0zj3gr4fxdp6k8d1br1"; depends=[base64enc gifti oro_nifti rgl xml2]; };
+  ciTools = derive2 { name="ciTools"; version="0.3.0"; sha256="0mqrnln7iz6jm30nh1qb2457icaz3hcqmgqbj8m61z0sf6jj9pd7"; depends=[arm boot dplyr lme4 magrittr MASS tibble]; };
+  cifti = derive2 { name="cifti"; version="0.4.5"; sha256="092334lcpkzv52bg53hzx64dnrwq67f3p9fzwchmafx1l46xrqx9"; depends=[gifti oro_nifti R_utils xml2]; };
   cin = derive2 { name="cin"; version="0.1"; sha256="1pwvy5nh5nrnysfqrzllb9fcrpddqg02c7iw3w9fij2h8s2v6kq5"; depends=[]; };
   cir = derive2 { name="cir"; version="2.0.0"; sha256="0ycjnbikpyhcfdik7c5knw4s9gl8y5h4219c4fhs4axs04np004v"; depends=[]; };
-  circlize = derive2 { name="circlize"; version="0.4.2"; sha256="0py82f5v25mi0s4626zbl5br1frdrj3diz2dakar1rz5yn956mdi"; depends=[colorspace GlobalOptions shape]; };
+  circlize = derive2 { name="circlize"; version="0.4.3"; sha256="0pg947gkryygikfbv6admx8gsg02b6g219j6a1sdnqij2908yxna"; depends=[colorspace GlobalOptions shape]; };
   circular = derive2 { name="circular"; version="0.4-93"; sha256="0hki85rs8wc5950pjaw28q54rly2napfbcrx3pchlfap6wwy5kkn"; depends=[boot mvtnorm]; };
-  cit = derive2 { name="cit"; version="2.1"; sha256="1kiph7znr9fiq704wfbms6hsl4shxfqijrlh4dhmik9x9m8sj538"; depends=[]; };
+  cit = derive2 { name="cit"; version="2.2"; sha256="1lf8r3r4zwvs08vl4byhw6rvf54nb7vg83558pi0b5866m7in4sc"; depends=[]; };
   citbcmst = derive2 { name="citbcmst"; version="1.0.4"; sha256="1zkd117h9nahwbg5z6byw2grg5n3l0kyvv2ifrkww7ar30a2yikl"; depends=[]; };
   citccmst = derive2 { name="citccmst"; version="1.0.2"; sha256="1b7awn1hjckxisfdi4ck697hwd4a5sqklwi7xzh6kgqhk9pv7vjn"; depends=[]; };
   citr = derive2 { name="citr"; version="0.2.0"; sha256="1nzn0yw74k6zkwzb6spfzqkj3cbx6ry6ypbsnhy6w2flabnnvy4v"; depends=[assertthat curl miniUI RefManageR rstudioapi shiny yaml]; };
-  civis = derive2 { name="civis"; version="1.1.1"; sha256="1ywqdfcxpzgvnwriswjyad3qssr4v0i9glpgnh73vx67vy738090"; depends=[DBI dbplyr devtools dplyr future ggplot2 httr jsonlite lubridate memoise purrr roxygen2 stringr testthat]; };
+  civis = derive2 { name="civis"; version="1.2.0"; sha256="10idsjq5grg9mw18f8v2wqz1rg95s12dsfglkrg7jar1782yq822"; depends=[DBI dbplyr devtools dplyr future ggplot2 httr jsonlite lubridate memoise purrr roxygen2 stringr testthat]; };
   cjoint = derive2 { name="cjoint"; version="2.0.6"; sha256="1bhzw751ll43qbyif589yxmi3m1pbm206lqnsc5zcxsnxjf4li5n"; depends=[ggplot2 lmtest Matrix sandwich survey]; };
   ck37r = derive2 { name="ck37r"; version="1.0.0"; sha256="0nn2sfsfs8mhgjrz0ghn041ybhj2qim4rs3lkci7s4n95c8hbgdi"; depends=[caret cvAUC doParallel doSNOW foreach ggplot2 pryr randomForest RANN reader RhpcBLASctl ROCR snow stringr SuperLearner tmle]; };
   ckanr = derive2 { name="ckanr"; version="0.1.0"; sha256="1cvn0cih763f0ppl1y90vnwj3cgqyb7az89sn12nyn2qb6igiqyl"; depends=[httr jsonlite magrittr]; };
   clValid = derive2 { name="clValid"; version="0.6-6"; sha256="1l9q7684vv75jnbymaa10md13qri2wjjg7chr1z1m0rai8iq3xxw"; depends=[class cluster]; };
   cladoRcpp = derive2 { name="cladoRcpp"; version="0.14.4"; sha256="0d4vl7xrrwbhhx56ymw52rb5svw9nskxdya4dl04lw1qxc45p4jy"; depends=[Rcpp RcppArmadillo]; };
+  clam = derive2 { name="clam"; version="2.3.1"; sha256="1n30fvx4macyawhzv17bzvc1s4qdn51p9mx28apfjbf80qck24g9"; depends=[]; };
   clampSeg = derive2 { name="clampSeg"; version="1.0-1"; sha256="0y0yxdv75xqmv7v6q8q8v1qj6xr8i7ik4nkh759rpyn0da7qq076"; depends=[Rcpp stepR]; };
   clarifai = derive2 { name="clarifai"; version="0.4.2"; sha256="0igi4xl27nz0r85hpws2zfc2gn5z2nmywp3saxgp74mh2y99lg6s"; depends=[curl jsonlite]; };
   class = derive2 { name="class"; version="7.3-14"; sha256="173b8a16lh1i0zjmr784l0xr0azp9v8bgslh12hfdswbq7dpdf0q"; depends=[MASS]; };
@@ -4834,24 +4937,25 @@ in with self; {
   classyfire = derive2 { name="classyfire"; version="0.1-2"; sha256="0rar3mi2m1wf14lmahjbpdh1jlnisvgsbx86xbqlb8c0f8zfzxq3"; depends=[boot e1071 ggplot2 neldermead optimbase snowfall]; };
   cld2 = derive2 { name="cld2"; version="1.1"; sha256="0zlvnnyz5aqjwzxwghfs9pyxcgr86yg3wpmrdg85dnlggjh2j12z"; depends=[Rcpp]; };
   cld3 = derive2 { name="cld3"; version="1.0"; sha256="0qka14z9w01b7xy6k97qcgd9qi6myfaw61imnf09mc8nqm0z3kya"; depends=[Rcpp]; };
-  cleanEHR = derive2 { name="cleanEHR"; version="0.1"; sha256="1ppjg72cfh9kdwl8kk7zxyr529xqcwpfcl5lisy7hgpqirma52qn"; depends=[data_table ggplot2 knitr pander Rcpp XML yaml]; };
-  cleanNLP = derive2 { name="cleanNLP"; version="1.10.0"; sha256="127h5aycgwzm8cdgy1ybabviisj4lbb029c8p1czzfwcdvxzpf8s"; depends=[dplyr Matrix readr stringi]; };
+  cleanEHR = derive2 { name="cleanEHR"; version="1.0"; sha256="0i8q7y4izc7q1pshdajy0n9wyihj4wlzzkd52ykam3dxqnwlnyh4"; depends=[data_table ggplot2 knitr pander Rcpp XML yaml]; };
+  cleanNLP = derive2 { name="cleanNLP"; version="2.0.3"; sha256="0hmivb2yhj47alxc9z1hlk23hfan9vz938m6xyp639xf58l97scz"; depends=[dplyr Matrix stringi]; };
   cleangeo = derive2 { name="cleangeo"; version="0.2-2"; sha256="1bhpn53v36652mwg2ba2a6cs34slb7i0df2ibssyr2lnx5gciq4i"; depends=[maptools rgeos sp]; };
   cleanr = derive2 { name="cleanr"; version="1.1.3"; sha256="0vf2c2inb729kzmpxaznqa2zwj80j1ix9198gc36zq41ag5pd7jk"; depends=[checkmate]; };
   clere = derive2 { name="clere"; version="1.1.4"; sha256="1nk3chcnaa4y1c5rr6c3bapvi106ikbk9grqcq6s6j0imny1jp4a"; depends=[lasso2 Rcpp RcppEigen]; };
+  clespr = derive2 { name="clespr"; version="1.0.1"; sha256="0f1vcd4y2ixpwywp5mi9jvf6r1099ajqba9sbkq7rc6f0y32wcpj"; depends=[AER doParallel foreach magic MASS pbivnorm survival]; };
   clhs = derive2 { name="clhs"; version="0.5-7"; sha256="0n7zy8wf78lka1l0zm42zxwi24bvavfy3irfqcnz5nslqkg61il2"; depends=[ggplot2 plyr raster reshape2 scales sp]; };
   cli = derive2 { name="cli"; version="1.0.0"; sha256="07as3dr7vwx02p3qgzlmxz1dlrd3x3lysrzp222ip9jcjpydp8wg"; depends=[assertthat crayon]; };
   clickR = derive2 { name="clickR"; version="0.3.38"; sha256="1qlc4lz2y2ls5qx1rqiswl5qr5qqkn6l30cp5ikhzr3ffvwp3nym"; depends=[beeswarm boot brms lme4 lmerTest ReporteRs xtable]; };
-  clickstream = derive2 { name="clickstream"; version="1.2.1"; sha256="1wan098mp2ml194al616h9qvv69q5l19218ja2x9j1qdq9dgp978"; depends=[arules ClickClust data_table ggplot2 igraph linprog plyr reshape2 Rsolnp]; };
+  clickstream = derive2 { name="clickstream"; version="1.3.0"; sha256="01bii527xy7hdph1pm6f1g4qnwa5yf3mwz01rjg1h2gc12s5vzgg"; depends=[arules ClickClust data_table ggplot2 igraph linprog MASS plyr reshape2 Rsolnp]; };
   clifro = derive2 { name="clifro"; version="3.1-5"; sha256="1fbl5zljy60xp3klrsgs84rqw9484xmyq84n3wkrqc6pyvhskp4c"; depends=[ggplot2 lubridate RColorBrewer RCurl reshape2 scales selectr XML]; };
   clikcorr = derive2 { name="clikcorr"; version="1.0"; sha256="0zdnbcl5q293mmm6pbn4ri7p1q6z6sff74axsb3nyd153v2xamr5"; depends=[mvtnorm]; };
   climatol = derive2 { name="climatol"; version="3.0"; sha256="0wfqs8yk3m6wpm86yfhsg100d4x67bzz1871mxrs69r6ybrh30qx"; depends=[]; };
   climbeR = derive2 { name="climbeR"; version="0.0.1"; sha256="10i74bph7dhv2xj01qdhymlmfwj32lzxivanif11zmzmq9p5bqsw"; depends=[ggplot2]; };
   climdex_pcic = derive2 { name="climdex.pcic"; version="1.1-6"; sha256="0dyhqxrma8g4ny4afv6drr885m88q2b8g1n19yy3yjbrbddyz8yl"; depends=[caTools PCICt Rcpp]; };
   clime = derive2 { name="clime"; version="0.4.1"; sha256="0qs9i7cprxddg1cmxhnmcfhl7v7g1r519ff2zfipxbs59m5xk9sf"; depends=[lpSolve]; };
-  climextRemes = derive2 { name="climextRemes"; version="0.1.3"; sha256="0nf885qsph2sygikw7hf4icq98393smamxkjahdxciv539a0cgvm"; depends=[extRemes]; };
-  climtrends = derive2 { name="climtrends"; version="1.0.6"; sha256="01007b0av9kv6rx2kkp5y39xkk5nqsyqbxa5z43qdq5zgf5pwvd9"; depends=[]; };
+  climextRemes = derive2 { name="climextRemes"; version="0.2.0"; sha256="0cjvmd48iaid0f95354zpxlgwy79jga9lz0p82yiv0fb2mvjpbqn"; depends=[boot extRemes]; };
   climwin = derive2 { name="climwin"; version="1.2.0"; sha256="0xqgf9hmpidxq85rfm0vndh3waw0qf2yhrzmp04sqbbqhzkf9v7n"; depends=[evd ggplot2 gridExtra lme4 lubridate Matrix MuMIn nlme numDeriv plyr RcppRoll reshape]; };
+  clinDR = derive2 { name="clinDR"; version="1.7"; sha256="0xnrnmwg4y2vlxsmhj5pzpyiqk90xjxl91i9nn3lv90xszmdh0x2"; depends=[doParallel DoseFinding foreach ggplot2 rstan]; };
   clinPK = derive2 { name="clinPK"; version="0.9.0"; sha256="1n1m8szd8mxdshwz8l3hfdxi7zrmsah46kxkv7jiffwnfhijfhsm"; depends=[curl testit]; };
   clinUtiDNA = derive2 { name="clinUtiDNA"; version="1.0"; sha256="0x3hb09073gkh60fc8ia0sfk948sm6z6j8sqkz275k4m8ryrabas"; depends=[]; };
   clinfun = derive2 { name="clinfun"; version="1.0.14"; sha256="13ip144qzgx9bg9pvdgz7y4v21sjvyjjixbm8mnvn6a6k62ycgmf"; depends=[mvtnorm]; };
@@ -4861,6 +4965,7 @@ in with self; {
   clogitL1 = derive2 { name="clogitL1"; version="1.4"; sha256="0m9yrg9mzzfv5qkdf6w55xyrjdghyrf27kk7b4x2gyvwvi5b7dkm"; depends=[Rcpp]; };
   clogitLasso = derive2 { name="clogitLasso"; version="1.0.1"; sha256="1mm815w31n0jvbh2rwq15ja1mzvjaz1x846xq1949aj4pb692zrl"; depends=[foreach lassoshooting]; };
   clogitboost = derive2 { name="clogitboost"; version="1.1"; sha256="19wcb7229amlxn6xahxj6pf9rwfm02s7qkxz2yvyhnq95y0clxkm"; depends=[Rcpp]; };
+  clordr = derive2 { name="clordr"; version="1.0.2"; sha256="1jpkspppwcsflr7pz45zd8vnpax1idmkvfcai63vqik4ig0snfaj"; depends=[MASS numDeriv pbivnorm]; };
   cloudUtil = derive2 { name="cloudUtil"; version="0.1.12"; sha256="18g946j00anlk20d0fh01w0xyj1kwyy7jhlgz5a85wmp6s2gkz74"; depends=[]; };
   clpAPI = derive2 { name="clpAPI"; version="1.2.7"; sha256="19bn5d7qjj7g0x17jnh2snymcn2r2skzj35hkhsgcj5r43834f3r"; depends=[]; };
   clttools = derive2 { name="clttools"; version="1.3"; sha256="0va9k1b4xsb2sgpxzvid6sa8m6b8i3r4kgghclmb78nnrs480cwi"; depends=[]; };
@@ -4868,11 +4973,11 @@ in with self; {
   clue = derive2 { name="clue"; version="0.3-54"; sha256="1fnl1wi0g8f243ra5krlpyz69pg8s8m2wwxa53hb086k7hqv74af"; depends=[cluster]; };
   clues = derive2 { name="clues"; version="0.5.9"; sha256="0znlsbfmnz5wkp2cswrkjbgchdmmf7h78mv2zwx382m9n9n9hshy"; depends=[]; };
   clusrank = derive2 { name="clusrank"; version="0.5-2"; sha256="168xad5dyz46yxm139q09n9vp1304yrhikxz5bcfzhm3psyv5fbf"; depends=[MASS Rcpp]; };
-  clust_bin_pair = derive2 { name="clust.bin.pair"; version="0.0.6"; sha256="0hmj85byw1j1b1crb7nj12wz0rddp5cg21jg1dwg7b0mn5xvy981"; depends=[]; };
-  clustEff = derive2 { name="clustEff"; version="0.1.1"; sha256="149x9m9x1yxh48ky54gyzps4pdh4jq36bz59ri3xd6v19i8r1ws3"; depends=[cluster fda qrcm]; };
+  clust_bin_pair = derive2 { name="clust.bin.pair"; version="0.1.2"; sha256="11lqd3vmx4kg08n6iv9na8rra49dkldx4f8jyf43hppbjrbvfinm"; depends=[]; };
+  clustEff = derive2 { name="clustEff"; version="0.1.2"; sha256="1hy7jc8yfg554l439lfrppdsizrdmvxrqf9dwbkjckbvggg54f0k"; depends=[cluster fda qrcm]; };
   clustMD = derive2 { name="clustMD"; version="1.2.1"; sha256="0w4s9dab2mm5x0xibyl6s101c64if945a2cmwin9psd95p76mcny"; depends=[ggplot2 MASS mclust msm mvtnorm reshape2 truncnorm viridis]; };
   clustMixType = derive2 { name="clustMixType"; version="0.1-29"; sha256="01rc84ppy5mw3cdcx15xs6061lg1mwh6kxa80rnj3ax3g10x37sh"; depends=[RColorBrewer]; };
-  clustRcompaR = derive2 { name="clustRcompaR"; version="0.1.0"; sha256="1md1ra18q1iga01q12jyy9va4qyvzlybvbdrdfy2kxhh82w057ww"; depends=[dplyr ggplot2 ppls quanteda tidyr]; };
+  clustRcompaR = derive2 { name="clustRcompaR"; version="0.2.0"; sha256="151xq8qf1mrl35kyhdliwl2jpdkpkbl3gdnrvrybanihry2p0kqg"; depends=[dplyr ggplot2 ppls quanteda]; };
   cluster = derive2 { name="cluster"; version="2.0.6"; sha256="1z4gbz7chxxi4ly6c0yjlikwgf8aa8dlg05cn5cd6pjr21zvh97l"; depends=[]; };
   cluster_datasets = derive2 { name="cluster.datasets"; version="1.0-1"; sha256="0i68s9305q08fhynpq24qnlw03gg4hbk4184z3q3ycbi8njpr4il"; depends=[]; };
   clusterCrit = derive2 { name="clusterCrit"; version="1.2.7"; sha256="13smdm8dmp4795qqn8an3k22l7xs4i4kgazyjzxdbzkg742akk7q"; depends=[]; };
@@ -4881,11 +4986,12 @@ in with self; {
   clusterPower = derive2 { name="clusterPower"; version="0.6.111"; sha256="1mwq188x9d495my75cdcahfjm3w46cas9jqxks5c0j63395cw9g3"; depends=[lme4]; };
   clusterRepro = derive2 { name="clusterRepro"; version="0.5-1.1"; sha256="0vsf6cq6d51a4w23ph8kdz2h8dfpzyd6i85049p2wakn1kdvkz5p"; depends=[]; };
   clusterSEs = derive2 { name="clusterSEs"; version="2.4.1"; sha256="04f30zsk96yv7c77darfqkkqw4ij4cq8r438lzlb1l063kpaclh4"; depends=[AER Formula lmtest mlogit plm sandwich]; };
-  clusterSim = derive2 { name="clusterSim"; version="0.46-2"; sha256="1l8hcqkz2p8gbnfz8fdb64fk0mbfxx8b725f3pz77c7bjrx4s4l1"; depends=[ade4 cluster e1071 MASS modeest R2HTML rgl]; };
+  clusterSim = derive2 { name="clusterSim"; version="0.47-1"; sha256="0k9cn0ycz7l9g4lb434cqp9yx2ilmp25xa5hlhma9jmxlbdsbji2"; depends=[ade4 cluster e1071 MASS modeest R2HTML rgl]; };
+  clusteredinterference = derive2 { name="clusteredinterference"; version="1.0.0"; sha256="1dnbymivxkrhx39maannhvm8ynlgjxsiavd2d9ych5nq4mjvhnjg"; depends=[cubature Formula lme4 numDeriv rootSolve]; };
   clusterfly = derive2 { name="clusterfly"; version="0.4"; sha256="0mxpn7aywqadyk43rr7dlvj0zjcyf4q7qbqw5ds38si7ik34lkrg"; depends=[e1071 plyr reshape2 rggobi RGtk2]; };
   clusterhap = derive2 { name="clusterhap"; version="0.1"; sha256="1ic6588mqp146jsvrxlxk449zw4n81xixgrny9r29497z7hg5a1m"; depends=[]; };
   clustering_sc_dp = derive2 { name="clustering.sc.dp"; version="1.0"; sha256="0cppka7613cbjjf1q2yp6fln511wbqdhh8d4gs6p0fbq379kzmvc"; depends=[]; };
-  clustermq = derive2 { name="clustermq"; version="0.8.1"; sha256="1wip3571j22mxi4jd3v5mb4fk8w89hiyfsvwxfbg6zn3r9m8yx4x"; depends=[infuser narray purrr R6 rzmq]; };
+  clustermq = derive2 { name="clustermq"; version="0.8.3"; sha256="1w5gklz7dw26861dqnvvm9hismn6p4wjw4hi0kf37p5hjq7cvfjh"; depends=[infuser narray purrr R6 rzmq]; };
   clusternomics = derive2 { name="clusternomics"; version="0.1.1"; sha256="05nkw6h2dvky07fj50myzw5xlkqyiflbn4vwqw8a1q2idv4awi7b"; depends=[magrittr MASS plyr]; };
   clustertend = derive2 { name="clustertend"; version="1.4"; sha256="1aqg8cy1hk3lmzvyqh9qc1mcknrva2i0c77hyd0yff9whz80ik4j"; depends=[]; };
   clusteval = derive2 { name="clusteval"; version="0.1"; sha256="1ld0bdl4fy8dsfzm3k7a37cyxc6pfc9qs31x4pxd3z5rslghz7rj"; depends=[mvtnorm Rcpp]; };
@@ -4901,37 +5007,38 @@ in with self; {
   cmprsk = derive2 { name="cmprsk"; version="2.2-7"; sha256="1imr3wpnj4g57n2x4ryahl4lk8lvq9y2r7319zv3k82mznha8bcm"; depends=[survival]; };
   cmprskQR = derive2 { name="cmprskQR"; version="0.9.1"; sha256="002s6ls670sdzrxgqv9gbl646b675q1gn6dzkngnf6rgcdqwid7n"; depends=[quantreg survival]; };
   cmrutils = derive2 { name="cmrutils"; version="1.3"; sha256="0zjc0bwp2p03hmnj3zjw7800pcdw8b8161y68npyp3hya0s4i9x0"; depends=[chron]; };
-  cmsaf = derive2 { name="cmsaf"; version="1.8.1"; sha256="0fcm3nqlydlsn1hsm1lrxq7jmmwf8kjqcxfhflsgmd4l0s06pr15"; depends=[fields ncdf4 raster sp]; };
+  cmsaf = derive2 { name="cmsaf"; version="1.9.0"; sha256="1r0cny0i3wi3xfi38l5ls6zycnp0q1a0s00qrdgi1956yrmnm5x1"; depends=[fields ncdf4 raster sp]; };
   cmvnorm = derive2 { name="cmvnorm"; version="1.0-3"; sha256="0810kzg78yaxzniq59a4swvdk9qxp37ja52f5n1zssgn0cwz1vk9"; depends=[elliptic emulator]; };
   cna = derive2 { name="cna"; version="2.0.0"; sha256="0cfr4g63wwqkkz2xxz76m82p0am2kyazal6sqp7gnrc48x9lv8im"; depends=[Rcpp]; };
   cnbdistr = derive2 { name="cnbdistr"; version="1.0.1"; sha256="05qi41jimslbngjgbwzfda0q25hb28ax79v9yckvrbpgjc8dk990"; depends=[hypergeo]; };
   cncaGUI = derive2 { name="cncaGUI"; version="1.0"; sha256="1v55kvrc05bsm1qdyfw3r3h64wlv3s6clxbr8k512lfk99ry42kn"; depends=[MASS plotrix rgl shapes tcltk2 tkrplot]; };
-  cnmlcd = derive2 { name="cnmlcd"; version="1.0-0"; sha256="0kbq01qrmpn133v18rjphhznpnj8g6dcn1lrbsjykhxkqz086s36"; depends=[lsei]; };
+  cnmlcd = derive2 { name="cnmlcd"; version="1.2-0"; sha256="1vpn926wf8vkifscnb35y4c74721iar2wykrl50fcv0fg16yggnd"; depends=[lsei]; };
   coRanking = derive2 { name="coRanking"; version="0.1.3"; sha256="1ss00l0c99fi9p6gcimb31nrl5iflps6lvplnjjqwcqjkb2pjh9p"; depends=[Rtsne scatterplot3d]; };
   coala = derive2 { name="coala"; version="0.5.2"; sha256="1rj9my20ba79alkhszh5lfvb9gjr6vcgiwqk2szawkpd1np3lpsr"; depends=[assertthat digest R6 Rcpp RcppArmadillo rehh scrm]; };
   coalescentMCMC = derive2 { name="coalescentMCMC"; version="0.4-1"; sha256="0xxv1sw5byf84wdypg5sfazrmj75h4xpv7wh4x5cr9k0vgf80b3s"; depends=[ape coda lattice Matrix phangorn]; };
   coarseDataTools = derive2 { name="coarseDataTools"; version="0.6-3"; sha256="0f1fkpmqq142yrqzbqv11s5q4jkq7dilmrllcns871hc6vah6ikd"; depends=[MCMCpack]; };
-  cobalt = derive2 { name="cobalt"; version="3.1.0"; sha256="1ip300qw128v2rlssfbmqa4bp26p1s0dswdqcjwxmzx4slasm3hd"; depends=[ggplot2 ggstance]; };
   cobs = derive2 { name="cobs"; version="1.3-3"; sha256="1pqvz7czcchri4x79g78hbwyagb3bqzdqb047zkbdinyz067c7kb"; depends=[quantreg SparseM]; };
   cocor = derive2 { name="cocor"; version="1.1-3"; sha256="106zyrrypil8jyg0pva5zj4hgb53z81nca3d0mh2q3j55zq3wl12"; depends=[]; };
   cocoreg = derive2 { name="cocoreg"; version="0.1.1"; sha256="0jrrkak964pl1vih592jgqgl6bw08j0fa1rh3j85x64bqq4m7278"; depends=[abind CCAGFA combinat e1071 ggplot2 glmnet gridExtra MASS multiway pls reshape RGCCA]; };
   cocorresp = derive2 { name="cocorresp"; version="0.3-0"; sha256="1r1ssz0cip1gk52nkbr1kpz8gwrg6lwri8ymk41xj2adlsp576v2"; depends=[vegan]; };
   cocron = derive2 { name="cocron"; version="1.0-1"; sha256="0dl14y9v9kndy5gzhhbhq3f31ja724y1hra40givy6bij7h2cj30"; depends=[]; };
   coda = derive2 { name="coda"; version="0.19-1"; sha256="14a4a8df4ygj05h37chmdn8kzcqs07fpbflxfrq530563mrza7yl"; depends=[lattice]; };
-  coda_base = derive2 { name="coda.base"; version="0.1.7"; sha256="1rjw5d76vxl0fx0675q994l8wwbfv8az5kzqj4g9xmgbj8iwdhan"; depends=[MASS Rcpp RcppArmadillo]; };
+  coda_base = derive2 { name="coda.base"; version="0.1.8"; sha256="05bbmfswajmjc8l3g2clwj3hyj06y9v7camq910b881frl2xj584"; depends=[MASS Rcpp RcppArmadillo]; };
   codadiags = derive2 { name="codadiags"; version="1.0"; sha256="1x243pn6qnkjyxs31h1hxy8x852r0fc952ww77g40qnrk8qw79xg"; depends=[coda]; };
-  codep = derive2 { name="codep"; version="0.6-5"; sha256="18da81wja7z9gnn11xiwi7cg43mrj4w2kjkk8s780krbycnfsn5p"; depends=[]; };
+  codemetar = derive2 { name="codemetar"; version="0.1.4"; sha256="0klwwf4ws2l15iq33d3jk7whp4inql6if7yai5z7493zs9c30z3x"; depends=[devtools git2r jsonld jsonlite readr stringi]; };
+  codep = derive2 { name="codep"; version="0.7-1"; sha256="1icj9mijp3x93rn7xbi0aivj7r4rlgiclsa920b1x9ws8b3jrv06"; depends=[]; };
   codetools = derive2 { name="codetools"; version="0.2-15"; sha256="0h7sjmvvsi35041jp47cxhsqzgf1y8jrw6fxii7n26i8g7nrh1sf"; depends=[]; };
-  codingMatrices = derive2 { name="codingMatrices"; version="0.3.1"; sha256="09jr163n886qnw2hy8fvdvaw2w8n1752z7yrwy2bqrpfj3cw93yh"; depends=[fractional Matrix]; };
+  codingMatrices = derive2 { name="codingMatrices"; version="0.3.2"; sha256="0kldx2h3mksw4644d0ask6ij7i63rrwk0njlsvkbdjz3bf7pdv1b"; depends=[fractional Matrix]; };
   codyn = derive2 { name="codyn"; version="1.1.0"; sha256="0s8ssaq59vddilz0fin9sgr8fir70c220cffbsy2l0qn34q48627"; depends=[assertthat permute]; };
   coefficientalpha = derive2 { name="coefficientalpha"; version="0.5"; sha256="0pfw64z7f0gp415nn7519rcw829a7wnwnjx94sc55jsvgb1di3kc"; depends=[lavaan rsem]; };
-  coefplot = derive2 { name="coefplot"; version="1.2.4"; sha256="0phpz4fvvxvpaybp4q1s69qxcpdzj8qxambivncps101mz7jj3sq"; depends=[ggplot2 plyr reshape2 useful]; };
+  coefplot = derive2 { name="coefplot"; version="1.2.6"; sha256="036njf2xwmjvyamanb7nfn2n09ps2rdgk3zrxn6khwp8ly245nps"; depends=[dplyr dygraphs ggplot2 magrittr plyr purrr reshape2 tibble useful]; };
   coenocliner = derive2 { name="coenocliner"; version="0.2-2"; sha256="0r4h0r3av2d1cxmjpwaabjn807626pzqnra2x542wdnnf7h8nmdf"; depends=[]; };
   coenoflex = derive2 { name="coenoflex"; version="2.2-0"; sha256="06f75spl4wkbgicm0bksnid2lb1gkvi05915wn5y4km45d82fkkr"; depends=[mgcv]; };
   coexist = derive2 { name="coexist"; version="1.0"; sha256="15ydhrx996i6caa0360c2bgn2zvgwfg5wdhsqq1gvrggs15w7nml"; depends=[]; };
-  cofeatureR = derive2 { name="cofeatureR"; version="1.0.1"; sha256="1nxdi97b37pw5xr6cib8hjgziazmy9lfbjgixn9ayacvdhkjs7ib"; depends=[dplyr ggplot2 lazyeval]; };
-  coga = derive2 { name="coga"; version="0.2.1"; sha256="0cb9hvrlhm8c9fjmg4s577r46lp6xj9g0amwd5n9j2vs4m2h8dnf"; depends=[Rcpp RcppGSL]; };
+  cofeatureR = derive2 { name="cofeatureR"; version="1.1.0"; sha256="1yz73541zsasw4k08b94vkhhs9ilchgpi5mrn4a0cqhb52il73sz"; depends=[dplyr ggplot2 lazyeval]; };
+  coga = derive2 { name="coga"; version="0.2.2"; sha256="0zbcx5g48168clvy8n4pp7pmvx0xlqfwr10fp34wf1k0j08smzx3"; depends=[Rcpp RcppGSL]; };
   coin = derive2 { name="coin"; version="1.2-2"; sha256="1fq58793bymzig1syjg2lvn6hsxfwkhh00jfrchh3c0y7rfhc66m"; depends=[modeltools multcomp mvtnorm survival]; };
+  coindeskr = derive2 { name="coindeskr"; version="0.1.0"; sha256="0iwkg9qx5gymzjxw3w1zlwq9336kbqp4z8a9wf9a1p2gp9727qcm"; depends=[httr jsonlite]; };
   coinmarketcapr = derive2 { name="coinmarketcapr"; version="0.1"; sha256="006ndsj37rx7fg3laama9y3xc6ivhp6b67w4wf3g161ypphlhkxv"; depends=[ggplot2 jsonlite RCurl]; };
   cointReg = derive2 { name="cointReg"; version="0.2.0"; sha256="0n4s809avhlrmrjdqzc2s752m7x96c4432gnjd4qv77r2nns7dw4"; depends=[checkmate MASS matrixStats]; };
   cointmonitoR = derive2 { name="cointmonitoR"; version="0.1.0"; sha256="0rsacvib9prgb199m5ndi0zlgfsvf1giqc5s41wp0yvxdxjdq5lw"; depends=[cointReg matrixStats]; };
@@ -4942,12 +5049,12 @@ in with self; {
   collpcm = derive2 { name="collpcm"; version="1.0"; sha256="15k6khsgikjpsasyz02bhgd43nij2n7nl0m0sgxvjlcn0nv95y2n"; depends=[latentnet network vegan]; };
   coloc = derive2 { name="coloc"; version="2.3-1"; sha256="1j3m9afpkm0bzib38yqvk85b6s6l56s6j2ni96gii4a06r87ig60"; depends=[BMA colorspace MASS]; };
   colorRamps = derive2 { name="colorRamps"; version="2.3"; sha256="0shbjh83x1axv4drm5r3dwgbyv70idih8z4wlzjs4hiac2qfl41z"; depends=[]; };
-  colorSpec = derive2 { name="colorSpec"; version="0.6-1"; sha256="0mi4dg2iq3a7gfdgwfxwchmfqjakrpdfms6j77ssas8lyq3ydcsi"; depends=[MASS]; };
+  colorSpec = derive2 { name="colorSpec"; version="0.6-2"; sha256="153jps1l0wv0b726b0l7bhsg7g45jdfsralg6k8nvyij4yw1dqi1"; depends=[MASS]; };
   colordistance = derive2 { name="colordistance"; version="0.8.0"; sha256="0fqj8apgfvk021cs1m79nk9kx294zxbj55jqylcrg3hadxy4plkf"; depends=[abind ape clue emdist gplots jpeg magrittr mgcv plotly png scatterplot3d spatstat]; };
   coloredICA = derive2 { name="coloredICA"; version="1.0.0"; sha256="1xj4dsrwgqzm2644nk3y8nj47m036b4ylh6v60jccj3707spb32r"; depends=[MASS]; };
-  colorednoise = derive2 { name="colorednoise"; version="0.0.1"; sha256="0mc9mb20lpk0x4ig5f605hal0aq2cwmmndfxkxlgsamd32wf884d"; depends=[dplyr purrr]; };
+  colorednoise = derive2 { name="colorednoise"; version="0.0.2"; sha256="0y2a86fwndcgkaxr4jmls7a9d1ipij4zi3r4nchwda0bynlw6mq4"; depends=[dplyr purrr Rcpp]; };
   colorfulVennPlot = derive2 { name="colorfulVennPlot"; version="2.4"; sha256="01b3c060fbnap78h9kh21v3zav547ak2crdkvraynpd2096yk51w"; depends=[]; };
-  colorhcplot = derive2 { name="colorhcplot"; version="1.0"; sha256="1hxh09sg9mdbfz4vx2z9wyx9xs5a82l8sw1wbwaa717a6q3ayjyj"; depends=[]; };
+  colorhcplot = derive2 { name="colorhcplot"; version="1.3.1"; sha256="009pyyb30kwshldd7v7zfy5rxys6i0dhlc5w8ail61acbg4rlrmz"; depends=[]; };
   colormap = derive2 { name="colormap"; version="0.1.4"; sha256="0032ji9n8pivl70jppq989fgg781wil8zag7pfl1hs9xrpin8asy"; depends=[ggplot2 stringr V8]; };
   colorpatch = derive2 { name="colorpatch"; version="0.1.2"; sha256="18p9hgccp37pbdf437xffkv6z500896v08fsw2jm8zcl9ladygaf"; depends=[colorspace ggplot2 gridExtra TSP]; };
   colorplaner = derive2 { name="colorplaner"; version="0.1.3"; sha256="0mqqk59yjklbc7a0n7jgyhj458622dfdsa1101a5w6kwppbjvnfg"; depends=[digest ggplot2 gtable scales]; };
@@ -4962,22 +5069,23 @@ in with self; {
   colt = derive2 { name="colt"; version="0.1.1"; sha256="028jqvgr14ig8jxp8h2lrf7mainzppgqh6v1479qfv4l9is3bnwy"; depends=[crayon]; };
   comato = derive2 { name="comato"; version="1.0"; sha256="03jnvv0sczy13r81aljhj9kv09sl5hrs0n5bn3pdi7ba64zgbjiw"; depends=[cluster clusterSim gdata igraph lattice Matrix XML]; };
   combinat = derive2 { name="combinat"; version="0.0-8"; sha256="1h9hr88gigihc4na7lb5i7rn4az1xa7sb34zvnznaj6pdrmwy4qm"; depends=[]; };
-  combiter = derive2 { name="combiter"; version="1.0.2"; sha256="159q7zh6bafh10mjjvl641gbxqhv5car62k8hjg9v7wflaqw7rab"; depends=[iterators itertools Rcpp]; };
+  combiter = derive2 { name="combiter"; version="1.0.3"; sha256="11pcvrpbvkzkjwks2z6ww7s9d5fkh8zl0jw52a5ya3y1wkqcs3n6"; depends=[iterators itertools Rcpp]; };
   comclim = derive2 { name="comclim"; version="0.9.4"; sha256="0m6ynccscsrrq70p0drwrwxp4skc630kv1l5smh48pi8kagahj1g"; depends=[]; };
-  cometExactTest = derive2 { name="cometExactTest"; version="0.1.3"; sha256="08ck1cv5apzn379j6mm2gmhm4qj18418crmqbbp46d80waf0ghxq"; depends=[dplyr]; };
+  cometExactTest = derive2 { name="cometExactTest"; version="0.1.5"; sha256="0ar9axm9cd1wd937xcmsmd7xqilnfyab8gsrpkiqpc3fjh86qyrp"; depends=[dplyr]; };
   comf = derive2 { name="comf"; version="0.1.7"; sha256="1waxapw870fssmy9mzzpslypbal7vanlajzv9ffnsh5w2yzjdpfi"; depends=[plyr]; };
   commandr = derive2 { name="commandr"; version="1.0.1"; sha256="1d6cha5wc1nx6jm8jscl7kgvn33xv0yxwjf6h3ar3dfbvi4pp5fk"; depends=[]; };
   commentr = derive2 { name="commentr"; version="1.0.4"; sha256="0anlcbk8rj0yr8i23qmr6v5ws0695nkc3mvgr6pnq1fg2d4c4brj"; depends=[stringr]; };
   commonmark = derive2 { name="commonmark"; version="1.4"; sha256="1vb8r9khpvcf0q7acv8rsplfjjwcll302bg5kp596cvn6aacypl6"; depends=[]; };
   commonsMath = derive2 { name="commonsMath"; version="1.1"; sha256="0v9jlk75ihh8yjhq5ybighvndp0hn1d6rqh78jkh4g6ylhbpvcw0"; depends=[]; };
+  comorbidity = derive2 { name="comorbidity"; version="0.0.3"; sha256="1j991wjavgalpwsjzb6bq2h2my1p7mvw8ziqka3kzr173plgmkq7"; depends=[checkmate]; };
   compHclust = derive2 { name="compHclust"; version="1.0-3"; sha256="0agay7rn5mrw07imz4l547b7m9pfcg3rhz4krfxrvg1q2z2kryvj"; depends=[]; };
   compactr = derive2 { name="compactr"; version="0.1"; sha256="0f2yds6inmx0lixj08ibqyd2i61l2cbg1ckgpb8dl2q7kcyyd6mx"; depends=[]; };
   compare = derive2 { name="compare"; version="0.2-6"; sha256="0k9zms930b5dz9gy8414li21wy0zg9x9vp7301v5cvyfi0g7xzgw"; depends=[]; };
   compareC = derive2 { name="compareC"; version="1.3.1"; sha256="0dachfr23lps2jj1y5gc958k54vskmww84gdgk4amihsdgjsnphg"; depends=[]; };
   compareDF = derive2 { name="compareDF"; version="1.2.0"; sha256="09y8bh9d9m2pf9j7qqyk1s07pp7rgbhzbkswl12vnx2cm24lp525"; depends=[dplyr htmlTable tidyr]; };
-  compareGroups = derive2 { name="compareGroups"; version="3.3.1"; sha256="1sb7acmsdw6zzczksiwh95q6hjf37hqi22njlfdxi233k3ad554y"; depends=[epitools gdata HardyWeinberg Hmisc knitr rmarkdown SNPassoc survival xtable]; };
+  compareGroups = derive2 { name="compareGroups"; version="3.3.3"; sha256="18v5as6037ndihsslk25455y553wcbrdriav1p6zbbc52lqcf0a3"; depends=[epitools gdata HardyWeinberg Hmisc knitr rmarkdown SNPassoc survival xtable]; };
   compareODM = derive2 { name="compareODM"; version="1.2"; sha256="019hq8j56asjvh4x1p65785mf38xr05j3by0749gl9k9yl8645da"; depends=[XML]; };
-  comparer = derive2 { name="comparer"; version="0.1.0"; sha256="134iflpsa5s9md4jhnbggrycgndz0issgmsnf6pccggx07d9r1z3"; depends=[progress R6]; };
+  comparer = derive2 { name="comparer"; version="0.1.1"; sha256="1nmvqzrvyxdsidkr243qdn0lj2s7j3jv1sh0mdlxm2v5063nyryr"; depends=[progress]; };
   comparison = derive2 { name="comparison"; version="1.0-4"; sha256="0pc462rhk8gr8zrf08ksi315kmhydlp027q5gd40ap5mmhk7rd82"; depends=[isotone]; };
   compeir = derive2 { name="compeir"; version="1.0"; sha256="1bb5459wcqpjic2b9kjn0l0qdn7sqmmx34hdb2aqg80q22mhx5dv"; depends=[etm lattice]; };
   compendiumdb = derive2 { name="compendiumdb"; version="1.0.3"; sha256="0glaqlzz5wr14yfhka1y7yw5ha6yc4waw61msbz0vkwj5z2hd2hk"; depends=[Biobase GEOquery RMySQL]; };
@@ -4987,7 +5095,7 @@ in with self; {
   complmrob = derive2 { name="complmrob"; version="0.6.1"; sha256="1dr80r1p05h3mlnjbgh6kfw86np8y2bhy9yi5qydv85w52k133n1"; depends=[boot ggplot2 robustbase scales]; };
   compoisson = derive2 { name="compoisson"; version="0.3"; sha256="0v5dl7xydqi4p97nipn4hyhpq2gghmx81ygvl0vc8b65jhq89y0p"; depends=[MASS]; };
   compositions = derive2 { name="compositions"; version="1.40-1"; sha256="1hn139g86bc1q3dj6kj9f21042v4x0xgrp4ni1zvx1zx8xmy3h8b"; depends=[bayesm energy robustbase tensorA]; };
-  compound_Cox = derive2 { name="compound.Cox"; version="3.6"; sha256="162f8419624h3iys7q6djx28qmfizcmjznnn70cqllg1yr7amiq5"; depends=[numDeriv survival]; };
+  compound_Cox = derive2 { name="compound.Cox"; version="3.7"; sha256="029r8v26ch8ps8d5pcg7y789sagsgm49xadwrcpjj87126hjh435"; depends=[numDeriv survival]; };
   compute_es = derive2 { name="compute.es"; version="0.2-4"; sha256="1b5i8z66zbag0vdv98mmpwmizpm68vc3ajh0n3q94zdcmhcbx12d"; depends=[]; };
   comtradr = derive2 { name="comtradr"; version="0.1.0"; sha256="0az61xsrwzr4g1s6g52vm9fivh985c6s06y3rb1c9ic0my385zhx"; depends=[httr jsonlite magrittr purrr]; };
   concatenate = derive2 { name="concatenate"; version="1.0.0"; sha256="1kvsw7vwa3hn97ff7r6z21h5ajs74azwv2dk4pzgyaasnbp778hw"; depends=[]; };
@@ -5008,27 +5116,28 @@ in with self; {
   condvis = derive2 { name="condvis"; version="0.4-2"; sha256="0l515wpsmh7g4q4w29gb1gv5kafwzfhb8as0ml8vbbrh6xcgmz9q"; depends=[MASS]; };
   coneproj = derive2 { name="coneproj"; version="1.12"; sha256="1937sf7b9s2y421gf2srjjdpv2knxrr03xyq5vg5j77z73kh9s6d"; depends=[Rcpp RcppArmadillo]; };
   conf_design = derive2 { name="conf.design"; version="2.0.0"; sha256="06vdxljkjq1x56xkg041l271an1xv9wq79swxvzzk64dqqnmay51"; depends=[]; };
-  confSAM = derive2 { name="confSAM"; version="0.1"; sha256="00l4hk0n63p3gdv6hpxqkkn3nw4rgw77rpwzn2k8fgq53ja44yfg"; depends=[]; };
+  confSAM = derive2 { name="confSAM"; version="0.2"; sha256="1l67ndya07hh0yqfbabfhsvp3hryklx0022grpr0cb7ff88d1zam"; depends=[]; };
   confidence = derive2 { name="confidence"; version="1.1-2"; sha256="0m6iz59n5jpi0ig3za3nir4d4bdsysf5g47d2nakfmaz03wk520z"; depends=[ggplot2 knitr markdown plyr xtable]; };
   config = derive2 { name="config"; version="0.2"; sha256="1p0gaqrqhcrdkp5cr3rn4i5ny8mr96b3q1fwgs0i8lk5riljkk20"; depends=[yaml]; };
-  configr = derive2 { name="configr"; version="0.3.1.1"; sha256="173apa7pmszpih589ka3jlmqygsphafw04s1azr10b9spb2b57bd"; depends=[glue ini jsonlite RcppTOML stringr yaml]; };
+  configr = derive2 { name="configr"; version="0.3.2"; sha256="114gdxpy167dljfsnm52w62nvgsi0v8nghjfvrc1r7fgg148v5cr"; depends=[glue ini jsonlite RcppTOML stringr yaml]; };
   confinterpret = derive2 { name="confinterpret"; version="1.0.0"; sha256="0qldaqpx7kpk71zfwv465jrscwzc9w3xfv52i4h01k9aw3q6m8ja"; depends=[]; };
   conformal = derive2 { name="conformal"; version="0.2"; sha256="13d8yv8l333n3m8kl2sdnd0m5b7gjixkqjlpfj312fk9nxvqdbcg"; depends=[caret e1071 ggplot2 randomForest]; };
+  conformalClassification = derive2 { name="conformalClassification"; version="1.0.0"; sha256="03v6xbgipb97byarqj0d38z9yb2g54mkkw343jxmi2j058z26yw7"; depends=[doParallel foreach mlbench randomForest]; };
   confreq = derive2 { name="confreq"; version="1.5.1"; sha256="0gy6d1kffb1w86ifldswb9krxyc2p646g9yjlfm1h243qlp52sfa"; depends=[gmp]; };
   congressbr = derive2 { name="congressbr"; version="0.1.1"; sha256="1kfpyrakbri9zqggcfy7flxyfpf85w5gqxi0p249qjw5khz8nkz5"; depends=[dplyr httr lubridate magrittr pscl purrr stringi stringr tibble tidyr xml2]; };
   conicfit = derive2 { name="conicfit"; version="1.0.4"; sha256="1d704xgiyqmbwfxnsmhqg885x10q8yqxmrk4khqpg3lh696bw97d"; depends=[geigen pracma]; };
   conics = derive2 { name="conics"; version="0.3"; sha256="06p6dj5dkkcy7hg1aa7spi9py45296dk0m6n8s2n3bzh3aal5nzq"; depends=[]; };
   conjoint = derive2 { name="conjoint"; version="1.39"; sha256="0f8fwf419js9c292i3ac89rlrwxs2idhwxml1qd8xd2ggwfh6w5m"; depends=[AlgDesign clusterSim]; };
-  connect3 = derive2 { name="connect3"; version="0.1.0"; sha256="07ih875ynrxzynj989d0h469ilq6c634z2z3igvxpkx40wr451d5"; depends=[]; };
   conover_test = derive2 { name="conover.test"; version="1.1.5"; sha256="0f1p10klidk1xic1wd48j9rjh2fb3z6pfjx4y021lglx1w3av68k"; depends=[]; };
-  constants = derive2 { name="constants"; version="0.0.1"; sha256="0vlfy80ww0xlkdrd493223rh4cq75pa7fmb57gkmzhclvfy9i608"; depends=[]; };
-  constellation = derive2 { name="constellation"; version="0.0.1"; sha256="1807gc45b7wildsf2xihi85n6bfmiy4a1qfd3df8r9ykzkjnp4yr"; depends=[data_table fasttime]; };
+  constants = derive2 { name="constants"; version="0.0.2"; sha256="1j9d52riwx7v1ppfdw0x517j7xh92qgskd4mj5yk9qa233brcwyy"; depends=[]; };
+  constellation = derive2 { name="constellation"; version="0.1.0"; sha256="1q6kv8gg89xk80y24ma0zp8zy3cy4i93bjzax524cjbfnhpknx1k"; depends=[data_table fasttime]; };
   constrainedKriging = derive2 { name="constrainedKriging"; version="0.2.4"; sha256="1a91s0b7yka37fb5pm172fmlqrhm6da370cqb9knvkg5n8vi4hys"; depends=[RandomFields rgeos sp spatialCovariance]; };
   contfrac = derive2 { name="contfrac"; version="1.1-11"; sha256="0vmcazjlg0p3xaksai3k7yb9bbqkd4lhmbvxf2qymr2asqm51mdi"; depends=[]; };
-  conting = derive2 { name="conting"; version="1.6"; sha256="0hyg1nj89i780mf1fgmrfiv5gl5nzlar8i1zy8fsim73cw9y39fm"; depends=[BMS coda gtools mvtnorm tseries]; };
+  conting = derive2 { name="conting"; version="1.6.1"; sha256="0vw6gwiajxzaai6ky0b89l2jg4kd4c6xxzb1cmzxlcdrhwmhz402"; depends=[BMS coda gtools mvtnorm tseries]; };
   contoureR = derive2 { name="contoureR"; version="1.0.5"; sha256="1izq1alkf24zd2sf2ir2adyrkwhdj7n89cv6z0dfh5mfqld5bkdn"; depends=[geometry plyr Rcpp reshape]; };
   contrast = derive2 { name="contrast"; version="0.21"; sha256="1fgm6qm3svqg8ryq2kd1h9z6f3ni8kki7gl3izvjw6wir97ph8nw"; depends=[geepack Hmisc MASS nlme rms sandwich]; };
-  controlTest = derive2 { name="controlTest"; version="1.0"; sha256="0gzhd92qy3dykwdfwckw6x46bd9m044hcn4bqwpv16af1xbrj963"; depends=[survival]; };
+  control = derive2 { name="control"; version="0.2.5"; sha256="02s8h5kwpzfrivx3ign84gwlybkcs03ibawyxdny9zz5yhb7x3bs"; depends=[expm Matrix pracma signal]; };
+  controlTest = derive2 { name="controlTest"; version="1.1.0"; sha256="19r8nvi35ldzgayifskjj706fv76hv6sj68yvggybp27rgyqbjfl"; depends=[survival]; };
   convertGraph = derive2 { name="convertGraph"; version="0.1"; sha256="1jsrygj6ydzc0nzyzaq95j4blqavj7dqz182vgm1ckv8an3if0jx"; depends=[]; };
   convertr = derive2 { name="convertr"; version="0.1"; sha256="1y9aq5in2qv1323amblmq3g22flpqvpkgkrw12kahg56mqf2b3iq"; depends=[DT miniUI rstudioapi shiny]; };
   convevol = derive2 { name="convevol"; version="1.1"; sha256="1d9h2vjzfmnbm4aprbvhndgjh85zp3j1hssm9082nw7zb9ycxs1s"; depends=[ape cluster geiger MASS phytools]; };
@@ -5052,7 +5161,7 @@ in with self; {
   corclass = derive2 { name="corclass"; version="0.1.1"; sha256="0ai8si992f58mrvc8hq598zbw9d4jslnc96lpzj5d89lljjv3hf5"; depends=[igraph]; };
   corcounts = derive2 { name="corcounts"; version="1.4"; sha256="0irlx62ql5rp5s7nnjdy6jh723wl4039wn10zxri8ihxwqsyyz3f"; depends=[]; };
   cord = derive2 { name="cord"; version="0.1.1"; sha256="18xj6cwmx1a7p3vqx5img8qf8s75nc6pcv78v15j081pgn786ma5"; depends=[Rcpp RcppArmadillo]; };
-  cordillera = derive2 { name="cordillera"; version="0.7-0"; sha256="0lapg9h2lw233h8plavs92c1l51m0sicslsr7gjyr0w3vkg13mxq"; depends=[dbscan yesno]; };
+  cordillera = derive2 { name="cordillera"; version="0.8-0"; sha256="0cpysfivwmim36gcqn1i7450a33hv4pdbvil7syb0hr7vdm083dd"; depends=[dbscan yesno]; };
   coreCT = derive2 { name="coreCT"; version="1.2.1"; sha256="19aq5snv5kin913rf0a1n9z0cg2l1jn2hnxbd0h05p1qrsysx52b"; depends=[igraph oro_dicom plyr raster]; };
   coreNLP = derive2 { name="coreNLP"; version="0.4-2"; sha256="0rvyqj7s3lijq4rzil65060b29m393m7zmg99mykp1g1kby5bjd8"; depends=[rJava XML]; };
   coreSim = derive2 { name="coreSim"; version="0.2.4"; sha256="1fhlss420rhs21l9i2ag5g3j0vnrkpqdh13ca4rwfan6h35qr3sm"; depends=[dplyr MASS]; };
@@ -5062,8 +5171,8 @@ in with self; {
   corlink = derive2 { name="corlink"; version="1.0.0"; sha256="06n9pcvbn8y9gy0mn9c0sw05424ss8smpaw3ly6a785cmj3d9b6m"; depends=[]; };
   corpcor = derive2 { name="corpcor"; version="1.6.9"; sha256="1hi3i9d3841snppq1ks5pd8cliq1b4rm4dpsczmfqvwksg8snkrf"; depends=[]; };
   corpora = derive2 { name="corpora"; version="0.4-3"; sha256="0zh8mabfy9yqgx7asi4yqv4c0kj59yvyxxaxjgdjy5kkr17zd4g4"; depends=[]; };
-  corpus = derive2 { name="corpus"; version="0.9.4"; sha256="1dxkhrlbg72wv5q0b464109abmfwjx3s54hqajxsbqbwrnlpl8zj"; depends=[]; };
-  corpustools = derive2 { name="corpustools"; version="0.3"; sha256="0z6f3k2zs12pwm011wmg9xk3b4322a87xm24d0pa266fqlrrhdm9"; depends=[data_table Matrix memoise plyr R6 Rcpp SnowballC stringi wordcloud]; };
+  corpus = derive2 { name="corpus"; version="0.10.0"; sha256="0c984rsnbai2qrm2s10lkdfgx31m0ax46zhl74bns2bxfmagcn3l"; depends=[utf8]; };
+  corpustools = derive2 { name="corpustools"; version="0.3.1"; sha256="0723n7gjk4yrnbvars6c6a805cqpx21z9yn9745wbvfgq7a8c4hy"; depends=[data_table Matrix memoise plyr R6 Rcpp SnowballC stringi wordcloud]; };
   corr2D = derive2 { name="corr2D"; version="0.2.0"; sha256="02z9k0j6j8jyjfgff55amkzsa5w0xbr9nqm1247qylsh8sl2rqcz"; depends=[colorspace doParallel fields foreach mmand rgl]; };
   correctedAUC = derive2 { name="correctedAUC"; version="0.0.3"; sha256="0c2kq7asq5mp48p8niqb84wnw4q2q2985wxbrywrhsszm9p3xspb"; depends=[ICC mnormt]; };
   corregp = derive2 { name="corregp"; version="1.0.3"; sha256="07zsbxhvh7n4ma6lgsmg0kkmgcs5afa02k6cq57afaqvxisw18l3"; depends=[diagram ellipse gplots rgl]; };
@@ -5073,6 +5182,7 @@ in with self; {
   corrr = derive2 { name="corrr"; version="0.2.1"; sha256="1d04nk92fjmk4kc5zipjqjhhmb1w97kid7l2jz5a8pkwiccn5byc"; depends=[dplyr ggplot2 ggrepel lazyeval magrittr purrr seriation tibble tidyr]; };
   corrsieve = derive2 { name="corrsieve"; version="1.6-8"; sha256="0ak3j9khcwv5rxbicck2sr260wpmd3xj254y7pdavx2fk0b72yxs"; depends=[]; };
   corset = derive2 { name="corset"; version="0.1-4"; sha256="0ladyqvkys4cldvbhkii9jwn1k5p1ym2g5bgdlz1hq1sv30ixn2f"; depends=[]; };
+  cosa = derive2 { name="cosa"; version="1.0.0"; sha256="1hrqjz3wvq1i1j69n8gpxfm8rzxqwwkfr4gwby5qcnlnq0ip2by8"; depends=[nloptr]; };
   cosinor = derive2 { name="cosinor"; version="1.1"; sha256="02nnqg51vq48lzk667cyarnmhcf5mifnsdij7dlgqvz2k4fdq4pl"; depends=[ggplot2 shiny]; };
   cosinor2 = derive2 { name="cosinor2"; version="0.1.0"; sha256="0pxkkp8dxhzqp2v3pfzigh1ka7ardf168k5p41z289xgar9p33g0"; depends=[cosinor ggplot2 Hmisc matrixStats]; };
   cosmoFns = derive2 { name="cosmoFns"; version="1.0-1"; sha256="0a6xhbgxxnymlvicg99yhgny2lscxcbmvqmy17kxmahdi797dsg6"; depends=[]; };
@@ -5080,7 +5190,7 @@ in with self; {
   costat = derive2 { name="costat"; version="2.3"; sha256="1kqyl89lx1amap9zgrfy1bqnl93kahrksj6yms44yrxr1as2g4nk"; depends=[wavethresh]; };
   cotrend = derive2 { name="cotrend"; version="1.0"; sha256="0h0y502wqq83wlf9ab1b9rxg1wycvi3sp4lbqfpvy46vgljrjw87"; depends=[xts]; };
   couchDB = derive2 { name="couchDB"; version="1.4.1"; sha256="1n99amvnsjp88y091603hjsvp243c5i6dbrsvdjfmzgj5dsrv70m"; depends=[bitops httr RCurl rjson]; };
-  countrycode = derive2 { name="countrycode"; version="0.19"; sha256="0cgv8sds01figs5dsm1gga2py2nzf3a3xrlkmblal52xxpng2jf8"; depends=[]; };
+  countrycode = derive2 { name="countrycode"; version="1.00.0"; sha256="1b2ijbf74bxvi01f53lbb2b9jya2rlyazvzacxpj79y1dbs600s6"; depends=[]; };
   countyfloods = derive2 { name="countyfloods"; version="0.1.0"; sha256="0ld8p8dfk9khvwffbn8sad0j3an25s7cvbi6jxljgx4zc6ldh699"; depends=[dataRetrieval dplyr ggplot2 lubridate maps plyr R_utils tidyr]; };
   countytimezones = derive2 { name="countytimezones"; version="1.0.0"; sha256="0sk22fmz9d3wvlfvjl1xdavvl04q1ywy8ww2gi5am3yiizkf0v9w"; depends=[dplyr lubridate]; };
   countyweather = derive2 { name="countyweather"; version="0.1.0"; sha256="0q56bnh9x6jyj1sdd1q4yv2n774mbv268pgp285bjybgqm2pyisz"; depends=[dplyr geosphere ggmap ggplot2 lubridate purrr raster rnoaa sp stringi tibble tidyr tigris]; };
@@ -5088,9 +5198,9 @@ in with self; {
   covLCA = derive2 { name="covLCA"; version="1.0"; sha256="15jsjrlaws1cqyrwvh4lzbhxkb11jmgpmddg98nfrzmjpczn2iw3"; depends=[Matrix mlogit poLCA]; };
   covRobust = derive2 { name="covRobust"; version="1.1-3"; sha256="0zcfala4l0j4w0sx5hlw40vxiypans3d7pgkxy25nj0d2m1jkvba"; depends=[]; };
   covTest = derive2 { name="covTest"; version="1.02"; sha256="0p4di8bdjghsq5jd678dprlhiwnxr5piqlx2z7hi2bjjpvvl5657"; depends=[glmnet glmpath lars MASS]; };
-  covTestR = derive2 { name="covTestR"; version="0.1.1"; sha256="06zbl03zcfcm85hb30jz7xv3gq2kmpsmgvz7lvwrlpflw63l3g28"; depends=[dplyr lazyeval Rcpp RcppArmadillo]; };
+  covTestR = derive2 { name="covTestR"; version="0.1.3"; sha256="13sjnc3yrh2hzdcnnh6sfzl8gqilarg79n0sjr8vqyvclmz686k0"; depends=[dplyr lazyeval Rcpp RcppArmadillo]; };
   covafillr = derive2 { name="covafillr"; version="0.4.2"; sha256="00790rgpdxxwc48cw0w5savvmvi8ljmyrh6w3f8qzx6pq1s982gm"; depends=[ggplot2 RcppEigen]; };
-  covatest = derive2 { name="covatest"; version="0.3.0"; sha256="1wq3rmdvd9k70zs3zwdr5hz2f63qa3bdfk3pw02v85w6nnjn6v64"; depends=[gstat matrixcalc sp spacetime]; };
+  covatest = derive2 { name="covatest"; version="1.0.0"; sha256="0g4wfwxngvcssi2bmmb2q5fv909z9qm4wfc8gcldz7fckbsc0k10"; depends=[gstat matrixcalc sp spacetime]; };
   covequal = derive2 { name="covequal"; version="0.1.0"; sha256="1qj6djqf1rnjmnaz1nryj9dc104082w258dzjjp5q18gg1ck8v0c"; depends=[corpcor RMTstat]; };
   covfefe = derive2 { name="covfefe"; version="0.1.0"; sha256="178qc77y4bn04qad3g70wr8y4v0ggyg807w67m8wvhbcxqr8yq7c"; depends=[tokenizers]; };
   covmat = derive2 { name="covmat"; version="1.0"; sha256="00y966897x83v471yarfikpr794b7adhgn5c9hgh0j1j4yfdc3b8"; depends=[DEoptim doParallel fGarch foreach ggplot2 gridExtra lhs Matrix mvtnorm optimx reshape2 RMTstat robust robustbase scales VIM xts zoo]; };
@@ -5098,10 +5208,10 @@ in with self; {
   covreg = derive2 { name="covreg"; version="1.0"; sha256="0v19yhknklmgl58zhvg4szznb374cdh65i7s8pcj2nwrarycwzaq"; depends=[]; };
   covsep = derive2 { name="covsep"; version="1.0.0"; sha256="1i6ygzzf2s0f7a42q2pb1v0gn369wxdyxvbk4k891irq352sf18r"; depends=[mvtnorm]; };
   cowbell = derive2 { name="cowbell"; version="0.1.0"; sha256="1zz0g30zvqfk5lh09y90iq3s7x2wwbs852i3d56mfp926gxdxc2y"; depends=[ggplot2 misc3d rgl]; };
-  cowplot = derive2 { name="cowplot"; version="0.9.1"; sha256="0iq0wsi7467cj8hqml06whk3xsiv89x8dvm9ynwp411pzzbdjgwm"; depends=[ggplot2 gtable plyr scales]; };
+  cowplot = derive2 { name="cowplot"; version="0.9.2"; sha256="13yjw7yv7imyqiawqqp304hkp6x36iv6rf6gn03dwzwkj9zwx4lb"; depends=[ggplot2 gtable plyr scales]; };
   cowsay = derive2 { name="cowsay"; version="0.5.0"; sha256="16rlpyfiwk2f04p49inf5m3pb5nvb45xs6sdfjszihm1hxl09x7x"; depends=[fortunes rmsfact]; };
   coxinterval = derive2 { name="coxinterval"; version="1.2"; sha256="0vb7vmzbb2dsihx04jbp2yvzcr033g435mywmwimqhfqdrmjx3fi"; depends=[Matrix survival timereg]; };
-  coxme = derive2 { name="coxme"; version="2.2-5"; sha256="0lpdwpvsgjgmbf55qqhflw4q40xmqm422inkssgn3ladcp68gb1s"; depends=[bdsmatrix Matrix nlme survival]; };
+  coxme = derive2 { name="coxme"; version="2.2-7"; sha256="0jbaw055whbbxwx6y0gggj5i9rlr787nyknwgqdf1dnzrfzm69v7"; depends=[bdsmatrix Matrix nlme survival]; };
   coxphMIC = derive2 { name="coxphMIC"; version="0.1.0"; sha256="0lmma5wzcczr762xqa4yamvwvyviqxk8gdrps3sydg3n14hckp6d"; depends=[numDeriv survival]; };
   coxphSGD = derive2 { name="coxphSGD"; version="0.2.1"; sha256="17ga33v7a89dsygk5yypkz03x7dvjhibnwlvwfvgb2p7djd8w465"; depends=[survival]; };
   coxphf = derive2 { name="coxphf"; version="1.12"; sha256="0vsdpbpc18fm6dwiqjwclgimwng34xqzy2mqbcijs6p7h1j124a0"; depends=[survival]; };
@@ -5125,7 +5235,6 @@ in with self; {
   cr17 = derive2 { name="cr17"; version="0.1.0"; sha256="1zyq77gxycbwyqhv5w0zw4n7v3ipjs6rcbja43g0k5q8h0gjnnn1"; depends=[cmprsk dplyr ggplot2 gridExtra gtable scales survival]; };
   crackR = derive2 { name="crackR"; version="0.3-9"; sha256="18fr3d6ywcvmdbisqbrbqsr92v33paigxfbslcxf7pk26nzn2lly"; depends=[evd Hmisc]; };
   cramer = derive2 { name="cramer"; version="0.9-1"; sha256="1dlapmqizff911v3jv8064ddg8viw28nq05hs77y5p4pi36gpyw4"; depends=[boot]; };
-  crandatapkgs = derive2 { name="crandatapkgs"; version="0.1.8"; sha256="12sz54csqnwk49iwg5zcigyczxhgskxsak6ws2ih7nqpv19v8a0m"; depends=[]; };
   crank = derive2 { name="crank"; version="1.1"; sha256="117sgq7zm5wxmd97sfc927qq70snra6vd090mhpcsdhipw1py6zc"; depends=[]; };
   cranlike = derive2 { name="cranlike"; version="1.0.1"; sha256="0lnbdkyk5mdy0qlvkx2hakqrisrxsdp5r3gif6f46pf4d9cpfj8v"; depends=[DBI debugme desc RSQLite]; };
   cranlogs = derive2 { name="cranlogs"; version="2.1.0"; sha256="1w1nbifjb9l106fk97zy0w73x73bw5azq89l3c1b8r2fz8aljkkc"; depends=[httr jsonlite]; };
@@ -5133,19 +5242,19 @@ in with self; {
   crawl = derive2 { name="crawl"; version="2.1.1"; sha256="0dr9z8y8rvc3wn1gjb6mh5wmszng9j1r2a9ks6p5am8ghf754sps"; depends=[dplyr gdistance mvtnorm raster Rcpp RcppArmadillo shiny sp]; };
   crayon = derive2 { name="crayon"; version="1.3.4"; sha256="0s7s6vc3ww8pzanpjisym4jjvwcc5pi2qg8srx7jqlz9j3wrnvpw"; depends=[]; };
   crblocks = derive2 { name="crblocks"; version="0.9-1"; sha256="1m6yy6jb1dld7m9jaasms5ps8sn3v039jvlk8b0c08hmm7y0rm3z"; depends=[]; };
-  crch = derive2 { name="crch"; version="1.0-0"; sha256="1wd9hwr68qlinaw23lckjizq5g67v74wc3v6ig1rxrxyssyzag68"; depends=[Formula ordinal]; };
+  crch = derive2 { name="crch"; version="1.0-1"; sha256="0h97vr9sy7hncjxv5v3y79pw2qqzpx6z6nqgx6k2ics1lf9misyb"; depends=[Formula ordinal sandwich scoringRules]; };
   creditr = derive2 { name="creditr"; version="0.6.1"; sha256="1dhjl99gjc97bdsdg29mq6xifivjn9kr0y7m2jzvrzb26x856z97"; depends=[devtools quantmod Rcpp RCurl XML xts zoo]; };
   credsubs = derive2 { name="credsubs"; version="1.0"; sha256="12bs1whk23y41hxa976j30d31x81rmxapz9ll5y2hi5c1h4fypn4"; depends=[]; };
   credule = derive2 { name="credule"; version="0.1.3"; sha256="1vciqkxkf93z067plipvhbks9k9sfqink5rhifzbnwc2c5gxp5mx"; depends=[]; };
   cricketr = derive2 { name="cricketr"; version="0.0.14"; sha256="0vziyagx594d0k44c53z720vwb1hflcxb7m898l5vfds8jsi6mhv"; depends=[dplyr forecast ggplot2 lubridate plotrix scatterplot3d XML]; };
-  crimCV = derive2 { name="crimCV"; version="0.9.3"; sha256="1p2cma78fb9a2ckmwdvpb6fc0818xw2mvq565dgiimgkdmmr0iid"; depends=[]; };
+  crimCV = derive2 { name="crimCV"; version="0.9.6"; sha256="14ckk88i7jk8a7kl51d7qfdis44jng6zz9zd72cdp80a57dvrvzq"; depends=[]; };
   crimelinkage = derive2 { name="crimelinkage"; version="0.0.4"; sha256="1zzk50kyccvnp51vzp28c9yi23hsp25arrgdn88lwfwa0m43rlar"; depends=[geosphere igraph]; };
   crisp = derive2 { name="crisp"; version="1.0.0"; sha256="1gs8jnd9y9pd55w6kwv9mvmg3wd8hjiw3lwx7k242pxccsxklfxq"; depends=[MASS Matrix]; };
-  crmPack = derive2 { name="crmPack"; version="0.2.1"; sha256="0n6731b5l4vsyk8r35jgvrmmb7sjrlxfcybhrvbpd9m0w5aqi3dz"; depends=[BayesLogit GenSA ggplot2 gridExtra MASS mvtnorm rjags]; };
+  crmPack = derive2 { name="crmPack"; version="0.2.6"; sha256="0jpf0626nkl3inbgb8hcgkhilrd1bkxjhm3jzscxrdghpzwvzw6h"; depends=[GenSA ggplot2 gridExtra MASS mvtnorm rjags]; };
   crminer = derive2 { name="crminer"; version="0.1.4"; sha256="1vnl01q5sw13g6qhvn61w9i40zpg9cszisgi0h8d6q6rr23iws9w"; depends=[crul hoardr jsonlite pdftools xml2]; };
   crmn = derive2 { name="crmn"; version="0.0.20"; sha256="1kl1k1s2gm63f9768cg8w4j6y1gq4hws3i7hdfhj7k9015s0a25p"; depends=[Biobase pcaMethods]; };
   crn = derive2 { name="crn"; version="1.1"; sha256="1fw0cwx478bs6hxidisykz444jj5g136zld1i8cv859lf44fvx2d"; depends=[chron RCurl]; };
-  crochet = derive2 { name="crochet"; version="1.0.0"; sha256="1r10lr60v5fqppbqgp994hcx3ybg3yqc0x983pi8frdhj9mqmzrz"; depends=[]; };
+  crochet = derive2 { name="crochet"; version="2.0.1"; sha256="1il29hnnx3kwjvsnirvm5vxdd04x94qn4526411cw0syyqqlbnp8"; depends=[]; };
   cronR = derive2 { name="cronR"; version="0.3.0"; sha256="0nyjgxgvasqv8g9cvkzii0jsr15x5i76waz5hzzsjar5mwq6vq8h"; depends=[digest]; };
   crop = derive2 { name="crop"; version="0.0-2"; sha256="1yjpk7584wrz9hjqs21irjnrlnahjg8lajra9yfdp6r927iimg1l"; depends=[]; };
   cropdatape = derive2 { name="cropdatape"; version="1.0.0"; sha256="19bn0apx4p8hnz388zg7sq59qv89vv8k5php317kcv7ai2k2gh34"; depends=[]; };
@@ -5155,20 +5264,22 @@ in with self; {
   crosstalk = derive2 { name="crosstalk"; version="1.0.0"; sha256="0lfa89vhrzi7a1rghmygcjr8gzddw35sinb3jx6g49mc9jias7mk"; depends=[ggplot2 htmltools jsonlite lazyeval R6 shiny]; };
   crossval = derive2 { name="crossval"; version="1.0.3"; sha256="0acpcisg6pkxblyc4j9hiri58h1rn7ay43p5ib5ia8a4a8bnfa4p"; depends=[]; };
   crosswalkr = derive2 { name="crosswalkr"; version="0.1.1"; sha256="0yk5yxxsd1alfbfjg5bzjc5b07jfj5s551bzrv3dg57hxnqw9b2z"; depends=[dplyr haven labelled readr readxl tibble]; };
+  crossword_r = derive2 { name="crossword.r"; version="0.3.5"; sha256="1h6r5rrmla3jsdfnkxsv4drvp3nrkqkygqv9ak0pn37zlbms99z9"; depends=[dplyr jsonlite magrittr R6 r6extended stringr]; };
   crp_CSFP = derive2 { name="crp.CSFP"; version="2.0.2"; sha256="0gazmhf5bv994x441m2xm0w18h9lw3y68qzdf6gmyqimj4wjqjgf"; depends=[MASS]; };
   crplyr = derive2 { name="crplyr"; version="0.1.4"; sha256="1z50hplp6m4zgjfhmf2j8b22np6kjzqnprrdc0qx8408cb9vc9zr"; depends=[crunch dplyr lazyeval tibble]; };
   crqa = derive2 { name="crqa"; version="1.0.6"; sha256="1v9fwl98jjlg2z5skqsjmmgpmmxy4g1gzvc28yflvdp50qn509v8"; depends=[fields Matrix plot3D pracma tseriesChaos]; };
   crrSC = derive2 { name="crrSC"; version="1.1"; sha256="171cw56q2yv1vb4qd0va75i2q89jcw1126q8pcbv0235g7p2a86z"; depends=[survival]; };
   crrp = derive2 { name="crrp"; version="1.0"; sha256="1fq54jr6avrli91a4z1hp5img4kghyw1yvjr5xyccsanf9i35x8r"; depends=[cmprsk Matrix survival]; };
   crrstep = derive2 { name="crrstep"; version="2015-2.1"; sha256="03vd97prws9gxc7iv3jfzffvlrzhjh0g6kyvclrf87gdnwifyn1z"; depends=[cmprsk]; };
-  crs = derive2 { name="crs"; version="0.15-29"; sha256="1vqwshyzigcixbmcksvs74pij8zc62vdn9wj86s4zi2qhc58xys2"; depends=[boot np quantreg rgl]; };
+  crs = derive2 { name="crs"; version="0.15-30"; sha256="1mv5rf8xfgqlqnvmgsj0zdpwlddzv4d0ymsjl00g21zjq4805g09"; depends=[boot np quantreg rgl]; };
   crskdiag = derive2 { name="crskdiag"; version="1.0.1"; sha256="0100wbyvchx6jwlrwc6rwhdjanips5c0f5zqzs2c0dgwygpqw30w"; depends=[cmprsk]; };
   crsnls = derive2 { name="crsnls"; version="0.2"; sha256="0rv0xrdl9ix6bhaf554gma8zf923w47f8j1dkbs8g6xjqjr1c40a"; depends=[]; };
   crtests = derive2 { name="crtests"; version="0.2.1"; sha256="0z8idz37dgwvi1q2vryldii7fn9yxd32gds77ml76jfplxbkikpd"; depends=[caret plyr stringr]; };
-  crul = derive2 { name="crul"; version="0.4.0"; sha256="0y317a3nr4cilvxg9lsibaqqb5wmz70x2kyna3hkw6hp18wavn0m"; depends=[curl httpcode mime R6 urltools]; };
-  crunch = derive2 { name="crunch"; version="1.19.0"; sha256="1zld0hbjdmf446kjbjkpnmc0x35807ficc89g97qgpbw9nihn4b7"; depends=[curl httpcache httr jsonlite]; };
+  crul = derive2 { name="crul"; version="0.5.0"; sha256="096jwl1674h1vi0plmqjy9k8w0fqnqhkig3kxf3cc4g7kz3ih5j7"; depends=[curl httpcode mime R6 urltools]; };
+  crunch = derive2 { name="crunch"; version="1.20.0"; sha256="1hsya10ba6mb3xd1lvbn2d74g9glm0l98fbh130phq5wdnn8lpx9"; depends=[crayon curl httpcache httr jsonlite]; };
   crunchy = derive2 { name="crunchy"; version="0.2.0"; sha256="1q9mqpkg5ljb798922fmvjjp36kyjr1rrm6jf3s2fwjrhq186y3z"; depends=[crunch shiny]; };
   cruts = derive2 { name="cruts"; version="0.3"; sha256="0yn6xc2wg23nkjnsb7kii7dn897wf4ymnpmgppacrsznl8mmlmgd"; depends=[lubridate ncdf4 raster sp stringr]; };
+  crypto = derive2 { name="crypto"; version="0.1.3"; sha256="0q5q2rx49185ckwr5czr4ia9j9060d1j6mz4bdvz3sl86qnllgsp"; depends=[curl doSNOW dplyr foreach jsonlite lubridate magrittr rvest xml2]; };
   cryst = derive2 { name="cryst"; version="0.1.0"; sha256="04da19dy3mkngd3ma44cd8cdkb5acjy9lbhfipa9flp339j1pp57"; depends=[flux pracma]; };
   csSAM = derive2 { name="csSAM"; version="1.2.4"; sha256="1ms8w4v5m9cxs9amqyljc2hr1178cz6pbhmv7iiq9yj1ijnl4r1x"; depends=[]; };
   csabounds = derive2 { name="csabounds"; version="1.0.0"; sha256="15l7i15w5jk4h3148dlk8v2i4awns5vxvv6m59qcv0hzns6jhx9j"; depends=[BMisc ggplot2 pbapply progress qte]; };
@@ -5180,7 +5291,7 @@ in with self; {
   cssTools = derive2 { name="cssTools"; version="1.0"; sha256="1p8c21c1hilmd9ibqyz493fy1x95hb2pidybsyicch53gkb542br"; depends=[sna]; };
   cstab = derive2 { name="cstab"; version="0.2-1"; sha256="08s1vann21k4afq84cp3gjzn2z0hqr7mb2znag0qyd9lzh3z6jd2"; depends=[cluster fastcluster Rcpp]; };
   cstar = derive2 { name="cstar"; version="1.0"; sha256="1zws4cq5d37hqdxdk86g85p2wwihbqnkdsg48vx66sgffsf1fgxd"; depends=[]; };
-  csv = derive2 { name="csv"; version="0.5"; sha256="1bpxbms54xigfz1z9jalcv5g61f74591ndcdpqrh53bgq6n0l7vv"; depends=[]; };
+  csv = derive2 { name="csv"; version="0.5.2"; sha256="1gwib79fysmiwaw48ghsygyqgc00j5zwy7lfgcziw1kp6nxkdk19"; depends=[]; };
   csvread = derive2 { name="csvread"; version="1.2"; sha256="1zx43g4f4kr7jcmiplzjqk2nw1g5kmmfap85wk88phf6fp0w8l5p"; depends=[]; };
   csvy = derive2 { name="csvy"; version="0.1.3"; sha256="0vszbxqa88sdsi73wng4y8zxhrvcksqa6qs3rbh50c2nll8r8kb3"; depends=[yaml]; };
   cthreshER = derive2 { name="cthreshER"; version="1.1.0"; sha256="18b66d08dq8pvnixmm4ir4r800b37z5yillaa88l317mdilbci9s"; depends=[Matrix]; };
@@ -5192,16 +5303,17 @@ in with self; {
   ctqr = derive2 { name="ctqr"; version="1.0"; sha256="1q4icv8qicgwr664cbrmkh2x9xmlrc80yvz8gnaqh86248kn4yp3"; depends=[pch survival]; };
   cts = derive2 { name="cts"; version="1.0-21"; sha256="0wagxqb8msjc8z33qp7sc92l53f56d9bzz9160bmgpjxlj6cnqcj"; depends=[]; };
   ctsem = derive2 { name="ctsem"; version="2.5.0"; sha256="15k2f9x436n78k63izgg31083spwh4r42s843h69kpvz25717m6p"; depends=[Matrix OpenMx plyr Rcpp rstan shiny]; };
-  ctv = derive2 { name="ctv"; version="0.8-3"; sha256="1bq35yzgapdmc8l064ghcq4rvdk3mw7sccrrig5achsxy6k7gwqn"; depends=[]; };
+  ctv = derive2 { name="ctv"; version="0.8-4"; sha256="0yl20b1j8c11b1g0q6qv0wsaivxpikwslhky4lckbm3rwbn5vbb2"; depends=[]; };
   cubature = derive2 { name="cubature"; version="1.3-11"; sha256="06f6gsvbb732p80r6hxvzh4ik546icxfvx21dyh65ypmw3kgm64k"; depends=[Rcpp]; };
   cubfits = derive2 { name="cubfits"; version="0.1-3"; sha256="0i2iybm9vpyqnahzka66yms1namdd36bz1i1yjy74qsc1h995rga"; depends=[coda foreach]; };
+  cubing = derive2 { name="cubing"; version="1.0-1"; sha256="00vqhh2kif9phwxs26xnizsy6mhdaaa97wyizw80g9wyh9c2r7n9"; depends=[rgl]; };
   cudaBayesreg = derive2 { name="cudaBayesreg"; version="0.3-16"; sha256="1xsamdsg4cq7l5r7czkg70j5gypf1dak3h353xfbz3rq0r0dni19"; depends=[cudaBayesregData oro_nifti]; };
   cudaBayesregData = derive2 { name="cudaBayesregData"; version="0.3-11"; sha256="1cls9xqgps7icjpi1mllkrksdxwc1jfhxgffvrcrqx2l16vw6qfx"; depends=[]; };
   cudia = derive2 { name="cudia"; version="0.1"; sha256="1ms3bc8sp6l3bm75j418mmb707sy3gyvxznhfias3nd4sw7i074x"; depends=[MCMCpack mvtnorm]; };
   cumSeg = derive2 { name="cumSeg"; version="1.1"; sha256="01hn3j1i7bi2r9vsqwbgy1f1alcisxyf4316xx57bg82lb34d0s5"; depends=[lars]; };
   cumplyr = derive2 { name="cumplyr"; version="0.1-1"; sha256="07sz1wryl3kxbk67qyvnkrkdrp4virlsaia0y6rf9bqdw7rc6vi2"; depends=[]; };
   cumstats = derive2 { name="cumstats"; version="1.0"; sha256="119w751z9dg6pjyk389pbl8ab8pirf9sqndi4nxi89ix2bby4xz8"; depends=[]; };
-  curl = derive2 { name="curl"; version="3.0"; sha256="01m52jz2q38yc32xbnmpm48hck2xj9fyhxq262p04y67gjpf7y3v"; depends=[]; };
+  curl = derive2 { name="curl"; version="3.1"; sha256="15fbjya2xrf2k9hhvg3frisrram4yk5wlfz67zj1z8ahpsb2a3r7"; depends=[]; };
   currentSurvival = derive2 { name="currentSurvival"; version="1.0"; sha256="0bqpfwf4v4pb024a98qwg81m6zd7ljg1ps42ifhxpqx7b9gdyi6c"; depends=[cmprsk survival]; };
   curry = derive2 { name="curry"; version="0.1.1"; sha256="1ps9hvbnb02m0b8hlw4admwbziyjvswj08ldi2dk3ymnrpawcc29"; depends=[]; };
   curstatCI = derive2 { name="curstatCI"; version="0.1.1"; sha256="0igqdv0fzzji10gz3j3ir8qxpy7vdjfl137067rc28qzbrl2sy2c"; depends=[Rcpp]; };
@@ -5214,9 +5326,7 @@ in with self; {
   cuttlefish_model = derive2 { name="cuttlefish.model"; version="1.0"; sha256="1rmkfyfd1323g2ymd5gi1aksp160cwy5ha5cjqh5r6fzd8hhqjxs"; depends=[]; };
   cvAUC = derive2 { name="cvAUC"; version="1.1.0"; sha256="13bk97l5nn97h85iz93zxazhr63n21nwyrpnl856as9qp59yvn64"; depends=[data_table ROCR]; };
   cvTools = derive2 { name="cvTools"; version="0.3.2"; sha256="0b7xb6dmhqbvz32zyfbdvm9zjyc59snic6wp1r21ina48hchn3sj"; depends=[lattice robustbase]; };
-  cvcrand = derive2 { name="cvcrand"; version="0.0.1"; sha256="1g2yblkfzkr0b2qqiip1jkarikczrsmb32z1n1hhgshvd3jdh3y4"; depends=[tableone]; };
   cvequality = derive2 { name="cvequality"; version="0.1.1"; sha256="0pqvaz8vfwd0x433rrdwdwjp3hgsw1nb5nzsxci5zibjksk14kgp"; depends=[]; };
-  cvplogistic = derive2 { name="cvplogistic"; version="3.1-0"; sha256="1lm66nn0q7665r64rdslxp35b7drdss4mys42ks54xdydcminns9"; depends=[]; };
   cvq2 = derive2 { name="cvq2"; version="1.2.0"; sha256="19k95xg2y3wd4mx3wvbrc1invybd446g13vsp3dv05nw2kx4f6w8"; depends=[]; };
   cvxbiclustr = derive2 { name="cvxbiclustr"; version="0.0.1"; sha256="00k75zy8v6qd5fg0h258i5z8ljjkfgkxz45cspysl1ap89d5n7df"; depends=[igraph Matrix]; };
   cvxclustr = derive2 { name="cvxclustr"; version="1.1.1"; sha256="0idmx4wgz4d0b1xzmlq5bsk2f2q38lpf9c117hg97xsfndzn7vqj"; depends=[igraph Matrix]; };
@@ -5234,40 +5344,39 @@ in with self; {
   cytominer = derive2 { name="cytominer"; version="0.1.0"; sha256="1p988aw689kgpbglmzrnl30krnbynwk3dgjv7w3x2719hi481z2j"; depends=[caret doParallel dplyr foreach futile_logger magrittr purrr rlang tibble tidyr]; };
   d3Network = derive2 { name="d3Network"; version="0.5.2.1"; sha256="1gh979z9wksyxxxdzlfzibn0ysvf6h1ij7vwpd55fvbwr308syaw"; depends=[plyr rjson whisker]; };
   d3Tree = derive2 { name="d3Tree"; version="0.2.0"; sha256="0xjr36hdd00dy8s8z1a1s44dn2wg0nm6yqc1rri2l0dqrbh4nrbn"; depends=[dplyr htmlwidgets magrittr plyr stringr]; };
-  d3heatmap = derive2 { name="d3heatmap"; version="0.6.1.1"; sha256="0xx1lpp9qpkqh991ib0l9z1wn6j67jnggrhq5gr5sm63m7sjijwn"; depends=[base64enc dendextend htmlwidgets png scales]; };
+  d3heatmap = derive2 { name="d3heatmap"; version="0.6.1.2"; sha256="1ici8j0wzzklhmw94qlxm292qs562vc32wq8mnjsas2n1p35vkmk"; depends=[base64enc dendextend htmlwidgets png scales]; };
   d3plus = derive2 { name="d3plus"; version="0.1.0"; sha256="0kadz83pals03n0v3zqhmhf6visigk52yn58xckhb57fid4xzj5w"; depends=[htmlwidgets magrittr]; };
   d3r = derive2 { name="d3r"; version="0.7.1"; sha256="1v25jh4gfp921q5cgjzxyar1sx2q842slkkshq1lnb31zkzidygq"; depends=[dplyr htmltools tidyr]; };
   dChipIO = derive2 { name="dChipIO"; version="0.1.5"; sha256="1xrafw5h071d8rfqaic3gifc80jpiddjz5x6l2cr8kgjvph60gqh"; depends=[]; };
   dCovTS = derive2 { name="dCovTS"; version="1.1"; sha256="1pd50nfmfcqpi8zj20ngl0hc23qa4rabqhc1xci3ivyhs0valhsl"; depends=[doParallel energy foreach]; };
   dGAselID = derive2 { name="dGAselID"; version="1.2"; sha256="0da7fi872i3ycb3j5v4isr4x2z39a68w4mdq859zslmqhiqd43b6"; depends=[ALL Biobase genefilter MLInterfaces]; };
   dHSIC = derive2 { name="dHSIC"; version="2.0"; sha256="1acbzln2rlyranccsjndpw6pj4a2lyb24jb52r2wms8lsg4fn2m9"; depends=[Rcpp]; };
-  dLagM = derive2 { name="dLagM"; version="0.1.0"; sha256="02923n5m5fpjr0vcbszbhxpr1xrywbb6bvqlih9yg5vngkryram5"; depends=[AER dynlm Hmisc wavethresh]; };
+  dLagM = derive2 { name="dLagM"; version="1.0.2"; sha256="0wl1sivphm6plmvjixxs90ki8a1pi4nb2vxqdm5xxbi0ljwpgl1x"; depends=[AER dynlm formula_tools Hmisc plyr wavethresh]; };
   dMod = derive2 { name="dMod"; version="0.4"; sha256="12q80pk0j5081qz4rb19iib0n4h1yf1c42iq1z14yyrmki3266pm"; depends=[cOde deSolve ggplot2 plyr rootSolve stringr]; };
   dSVA = derive2 { name="dSVA"; version="1.0"; sha256="0vy0flyg82x0n9vw6jf9f76qy84sp0wnis91faj37ac5hdv3pvsb"; depends=[sva]; };
-  dad = derive2 { name="dad"; version="3.0.1"; sha256="0h8nj8nsmhyv1xww3x0z2fgnh1cd1jyszd91i79wba465vbsi4mh"; depends=[e1071 lattice]; };
-  dae = derive2 { name="dae"; version="3.0-04"; sha256="1fykmdgg29smdm8qn2cfspjh8lspa57h4s0jsdfz8gh5zfmvsn1h"; depends=[ggplot2]; };
+  dad = derive2 { name="dad"; version="3.1.0"; sha256="1vwwcrawci8v5rz3al2647gypk0bpngvngkb5s6zxhrdvk785m9a"; depends=[e1071 lattice]; };
+  dae = derive2 { name="dae"; version="3.0-12"; sha256="0xp6cyyk4s06igh2jvrdr28n0bhma79c4cfqxx9mihfx9hcw4bh9"; depends=[ggplot2]; };
   daewr = derive2 { name="daewr"; version="1.1-7"; sha256="01n9g3adjk66wx9lm9gl6wa3y9ba5w0w0p5ayj8rx5ywxnm8fnvi"; depends=[BsMD FrF2 lattice]; };
   daff = derive2 { name="daff"; version="0.3.0"; sha256="1kl5pjwxds6bz58zd5xaa1hknd6f9i0512895fhljqi7kvsrldra"; depends=[jsonlite V8]; };
   dafs = derive2 { name="dafs"; version="1.0-37"; sha256="1vdi57qaqdn39yf1ih2gzry02l289q4bffpksglsl4shs6bg2206"; depends=[s20x]; };
   dagR = derive2 { name="dagR"; version="1.1.3"; sha256="13jyhwjvvrjjja18rqzfdcw9ck90qm5yjwd25nygxgdf1894y03b"; depends=[]; };
-  dagbag = derive2 { name="dagbag"; version="1.1"; sha256="1hpg7fs1yhnycziahscymkr0s3a2lyasfpj0cg677va73nrpdz12"; depends=[]; };
   dagitty = derive2 { name="dagitty"; version="0.2-2"; sha256="11jpjr2l89glr9962mbhy4dfbdjs80nf603w90xx16s4qcmcsghc"; depends=[boot jsonlite MASS V8]; };
+  dalmatian = derive2 { name="dalmatian"; version="0.3.0"; sha256="06j7ampp0hwjqgw2agplfc8mngxnb6g4yv3l08plg35769jxxz7f"; depends=[coda dglm gdata ggmcmc rjags]; };
   dam = derive2 { name="dam"; version="0.0.1"; sha256="1b0fi3l8jxgpr9fwvi03giq7wm39msbh0c82ffgkh54a3bbf5blc"; depends=[]; };
   dams = derive2 { name="dams"; version="0.2"; sha256="0hf5s8i61r5q4h3s8dfmdl3vkj7v15ha59pjvpjqx3yihsgziqz9"; depends=[RCurl]; };
-  darch = derive2 { name="darch"; version="0.12.0"; sha256="17nvxqxbbdv4qdallld5f2c6nhhszsz7ja04rhz5g3844s87bv2f"; depends=[caret futile_logger ggplot2 Rcpp reshape2]; };
   darksky = derive2 { name="darksky"; version="1.3.0"; sha256="1740cw5qifgvqa0nafd6lmllxi32n1zm45zlify1yn3h1qdcszhb"; depends=[ggplot2 gridExtra gtable httr plyr]; };
-  dartR = derive2 { name="dartR"; version="0.93"; sha256="1mkap7dvbd6j4d2zqp9kdld06ds78fi4w01w7zqmnvz3xzigp3li"; depends=[adegenet ape data_table DBI Demerelate directlabels dismo doParallel foreach ggplot2 MASS misc3d pca3d pegas plotly plyr quadprog qvalue reshape2 rgl seqinr SNPassoc SNPRelate StAMPP stringr tidyr vegan]; };
+  dartR = derive2 { name="dartR"; version="1.0"; sha256="1pp739vwvs4k2a3xnkywvaxppkr764zgf5jfrf8l8830jidg2fsc"; depends=[adegenet ape data_table DBI Demerelate directlabels dismo doParallel foreach ggplot2 MASS misc3d pca3d pegas plotly plyr quadprog qvalue reshape2 rgdal rgl seqinr SNPassoc SNPRelate sp StAMPP stringr tidyr vegan]; };
   darts = derive2 { name="darts"; version="1.0"; sha256="07i5349s335jaags352mdx8chf47ay41q7b0mh2xjwn2h9kzgqib"; depends=[]; };
   dashboard = derive2 { name="dashboard"; version="0.1.0"; sha256="1znqwvz49r47lp6q48qaas0s63wclgybav82a247qvcavzns3kip"; depends=[Rook]; };
-  dat = derive2 { name="dat"; version="0.3.0"; sha256="1mzkxjyph4xka32c6bl0krr7723sch15x9wh8v9rcawn0gwnknmj"; depends=[aoos data_table dplyr Formula magrittr progress tibble]; };
+  dat = derive2 { name="dat"; version="0.4.0"; sha256="1nw16hsw9b4hpcl5rqrlw6yk9y2h1pd0ra1c7iz82sknkyd5afi6"; depends=[aoos data_table dplyr Formula magrittr progress tibble]; };
   data_table = derive2 { name="data.table"; version="1.10.4-3"; sha256="12caklgr19vy9wprdks6zh825vr1iw1cajgwcnbpyvmijqdlz2xs"; depends=[]; };
-  data_tree = derive2 { name="data.tree"; version="0.7.3"; sha256="1r442a1mbmrv7x88769kbz4p32cy8hacliahbls2qsr2ikbk1w2p"; depends=[DiagrammeR R6 stringr]; };
-  data_world = derive2 { name="data.world"; version="1.1.1"; sha256="0kmlls8wicyfjxl27pajkagi4ps1s85rd7ywwfjfrkzkangy05xz"; depends=[dwapi httr ini]; };
+  data_tree = derive2 { name="data.tree"; version="0.7.4"; sha256="0yyk5sc07i987k77advpsjk2kdnral9x85bsd8rrl0x7i2cjdbhf"; depends=[DiagrammeR R6 stringr]; };
+  data_world = derive2 { name="data.world"; version="1.2.0"; sha256="0bw1yi5qwnm3fx8d7j2q9r9fyzf4c10z3m4yxs1srp3z77i8v6d9"; depends=[dwapi httr ini miniUI shiny stringi]; };
   data360r = derive2 { name="data360r"; version="1.0.1"; sha256="1g245zg70ch81zjmd1ng16lks38qr0a6m63y582w558mza7v148g"; depends=[curl data_table jsonlite reshape2]; };
   dataCompareR = derive2 { name="dataCompareR"; version="0.1.1"; sha256="06nba2yir2yz1189bsag9yavdf9hfmpswxdy92dlnbz9d27jjsic"; depends=[dplyr knitr markdown stringi]; };
-  dataMaid = derive2 { name="dataMaid"; version="1.0.0"; sha256="0hf3jff9qz789nsnnvqdxcw23mzilk4krywzvyh5kr2hpzsbx1l4"; depends=[ggplot2 gridExtra haven htmltools magrittr pander robustbase whoami]; };
+  dataMaid = derive2 { name="dataMaid"; version="1.1.0"; sha256="1scpyc0c4rcb0hk1dnzaqprb59n9vrngkg2h1h1knl5klxabkj2y"; depends=[ggplot2 gridExtra haven htmltools magrittr pander robustbase whoami]; };
   dataMeta = derive2 { name="dataMeta"; version="0.1.1"; sha256="13xxayqxbps07h0xr5b7sb7q30gy5zm7jzzaq4k20fskkjrzhzcm"; depends=[dplyr]; };
-  dataPreparation = derive2 { name="dataPreparation"; version="0.3.2"; sha256="1cdsyv03y27iggdg3j352lwy7lxaczg9lb9xb6wwj2p0xaq1rhih"; depends=[data_table lubridate Matrix progress stringr]; };
+  dataPreparation = derive2 { name="dataPreparation"; version="0.3.5"; sha256="186xi3nbjgqwf8kilinzd92kzwdazgcpmbb5q420vrs2va6dv0x8"; depends=[data_table lubridate Matrix progress stringr]; };
   dataQualityR = derive2 { name="dataQualityR"; version="1.0"; sha256="0f2410sd6kldv7zkqsmbz1js0p5iq7zwlnfwmmnlbrd303p35p3j"; depends=[]; };
   dataRetrieval = derive2 { name="dataRetrieval"; version="2.7.3"; sha256="0lrv6fyqi7k079wdpqilgjlb4j2qfs3r02d9ip8s9yznfwqsl826"; depends=[curl dplyr httr jsonlite lubridate readr reshape2 xml2]; };
   datacheck = derive2 { name="datacheck"; version="1.2.2"; sha256="1i3n5g1b6ix8gpn4c74s7ll1dbrllrzgpb1f3hk449d6p4kmisq6"; depends=[Hmisc shiny stringr]; };
@@ -5278,25 +5387,26 @@ in with self; {
   datafsm = derive2 { name="datafsm"; version="0.2.1"; sha256="16l6ssprsvnpzxlfnqj7r061x700704s5gdci5x9ixdjmglakmdd"; depends=[caret GA Rcpp]; };
   datamap = derive2 { name="datamap"; version="0.1-1"; sha256="0qm4zb9ldg4wz1a7paj5ilr1dhyagq81rk9l2v43hmkv52sssgkv"; depends=[DBI]; };
   datamart = derive2 { name="datamart"; version="0.5.2"; sha256="0c0l157fzkcp30ch4ymaalcx18zhz6sa5srr50w9izhbx3pmldxp"; depends=[base64 gsubfn markdown RCurl RJSONIO XML]; };
-  dataonderivatives = derive2 { name="dataonderivatives"; version="0.3.0"; sha256="17588r2b528ylchdh8aa1k7q7w7wc3f2mxixif8j6snzpwsvwpzc"; depends=[assertthat httr lubridate readr tibble]; };
+  dataonderivatives = derive2 { name="dataonderivatives"; version="0.3.1"; sha256="0q1zd1l7l0hmbs1bx469d706rmprjbz2f2dgcnfp9wxfgqpfxkz1"; depends=[assertthat httr lubridate readr tibble]; };
   dataone = derive2 { name="dataone"; version="2.1.0"; sha256="0vpa4gb30dvxax4sxbnbn8gblnzdfcf2k0v5js3gqwjb95ah4w4y"; depends=[base64enc datapack hash httr jsonlite parsedate plyr stringr uuid XML]; };
   datapack = derive2 { name="datapack"; version="1.3.1"; sha256="0hzc68vgjvpm235zg8k2642c3jzh3ls9kp6lpz720y1b56q8k3n7"; depends=[digest hash redland uuid XML]; };
-  datapasta = derive2 { name="datapasta"; version="2.0.0"; sha256="100nqw315xdzxpzn1gmx4881zli4lwzwckdvqjciysv4l5gvzzfm"; depends=[clipr readr rstudioapi]; };
-  datarobot = derive2 { name="datarobot"; version="2.7.1"; sha256="13aabv0h1ssfd3llbqgapcfgd0x87h99bdzhhfhmkr84mzd6pzpv"; depends=[curl httr jsonlite yaml]; };
+  datapasta = derive2 { name="datapasta"; version="3.0.0"; sha256="022ci7iy683lh3fh13a4b3szzqp6j4fchil695bifhi0a34bnxyr"; depends=[clipr readr rstudioapi]; };
+  datarobot = derive2 { name="datarobot"; version="2.8.0"; sha256="06yqp1lvskvcyiz8a2jy7kzv721qrvf5ycw6g9jl2bj84raifmap"; depends=[curl httr jsonlite yaml]; };
   datasauRus = derive2 { name="datasauRus"; version="0.1.2"; sha256="1ixfc1v0iv5jb4920957xhpq9kchdy482vdsm51wj1961ldrkhvh"; depends=[]; };
   dataseries = derive2 { name="dataseries"; version="0.2.0"; sha256="11wc2p5m8qbdmkpbd21lpwl28a1dpab88c3gqyrhsn0298lpnip4"; depends=[]; };
   datasets_load = derive2 { name="datasets.load"; version="0.1.0"; sha256="029rxg0h17nszkxgq5kjd0njymb8pgdsabmz5slshzd2ijjh82jz"; depends=[DT miniUI shiny]; };
   datastepr = derive2 { name="datastepr"; version="0.0.2"; sha256="039yggdj8jdici7hwmkjwgix45lvwjl7rw5h2rfzsm9xaq6vw1z2"; depends=[dplyr lazyeval magrittr R6 tibble]; };
-  datastructures = derive2 { name="datastructures"; version="0.2.0"; sha256="03jyn1ksxpgva4r22h06lkyrm5ar8xxk3ssaskwqw7l5482i6rvf"; depends=[BH Rcpp]; };
+  datastructures = derive2 { name="datastructures"; version="0.2.1"; sha256="05m9zrqil1qmjax3r86wn6k1fq4v7x3hwq2hs9n36lyhj06r031y"; depends=[BH Rcpp]; };
   datasus = derive2 { name="datasus"; version="0.4.0"; sha256="18mvgdzk2f2plzgz9w47w4zxbdz24rymxvjv08j0cm242pcl11l7"; depends=[dplyr httr magrittr RCurl readr rvest stringi stringr xml2]; };
   datautils = derive2 { name="datautils"; version="0.1.5"; sha256="1yy25a84zmfh54jvxwa7mv4j296rmjgd40m4p81mrsswlqvncmfn"; depends=[deldir gplots gtools]; };
   dataverse = derive2 { name="dataverse"; version="0.2.0"; sha256="0lyga8rdsir2yr1n9nr10iiaf6a7dxp1nb04bx8mq8ljrvpkgr8n"; depends=[httr jsonlite xml2]; };
   dataview = derive2 { name="dataview"; version="2.1.1"; sha256="1nn33h5c1h4a3zm1xm7sdz4s6sy0f3r53jhm7bv6qk7aiylwqf6v"; depends=[data_table xtermStyle]; };
-  date = derive2 { name="date"; version="1.2-37"; sha256="0321kqvpy5cvl8hmm6pd0pyjpi30glm8hvw60mrql6y28sn6pqhl"; depends=[]; };
+  date = derive2 { name="date"; version="1.2-38"; sha256="1ziy17kz02j7lals14s43rs9lmxxfn2ppfi55q4b3m4gfj9pr4jc"; depends=[]; };
   datetime = derive2 { name="datetime"; version="0.1.2"; sha256="0qbd1makidkbpr26wkxchnb8rpwzm4l42j4vipwwmfwv3gpslmjx"; depends=[]; };
   datetimeutils = derive2 { name="datetimeutils"; version="0.2-7"; sha256="1ql44k6s0pskc7kg28aly9k7ncl58gzs80d9gpwyjdhrgimimcxk"; depends=[]; };
+  datoramar = derive2 { name="datoramar"; version="0.1.0"; sha256="0zq6vhq6dmsyagmqrmb85z6fy9qhwra3s3iasr3jgc4ryr009pml"; depends=[httr jsonlite tibble]; };
   dave = derive2 { name="dave"; version="2.0"; sha256="1rraphpp34czyjj15xzvj1ihlnqzcppqls9n2g85n49zv0n1ngn8"; depends=[cluster labdsv nnet tree vegan]; };
-  dawai = derive2 { name="dawai"; version="1.2.2"; sha256="1zc4zrgqdjgja1284wqfxdhq0hfwp231mnr49f158l6bnhlp82n4"; depends=[boot ibdreg mvtnorm]; };
+  dawai = derive2 { name="dawai"; version="1.2.3"; sha256="18dg81d1018f8ibm4p43ih6fjgm6r0qs5phqbp7pqrixjj3ydk58"; depends=[boot ibdreg mvtnorm]; };
   dbConnect = derive2 { name="dbConnect"; version="1.0"; sha256="1vab5l4cah5vgq6a1b9ywx7abwlsk0kjx8vb3ha03hylcx546w42"; depends=[gWidgets RMySQL]; };
   dbEmpLikeGOF = derive2 { name="dbEmpLikeGOF"; version="1.2.4"; sha256="0vhpcxy702cp3lvlif2fzmvccys8iy7bv1fbg6ki2l8bvn2f7c5p"; depends=[]; };
   dbEmpLikeNorm = derive2 { name="dbEmpLikeNorm"; version="1.0.0"; sha256="0h5r2mqgallxf9hin64771qqn9ilgk1kpsjsdj2dqfl3m8zg967l"; depends=[dbEmpLikeGOF]; };
@@ -5306,25 +5416,26 @@ in with self; {
   dblcens = derive2 { name="dblcens"; version="1.1.7"; sha256="02639vyaqg7jpxih8cljc8snijb78bb084f4j3ns6byd09xbdwcw"; depends=[]; };
   dblr = derive2 { name="dblr"; version="0.1.0"; sha256="0wzmhmp706mw0pkh81nsb7qzclwyhm6f2mjvpvz043ng5xrxwvvw"; depends=[CatEncoders data_table Metrics xgboost]; };
   dbmss = derive2 { name="dbmss"; version="2.5-1"; sha256="1giwbzjgz2qiry9mmqyby1jxpdsxaifv1p227i9jyq9d46gs9qiy"; depends=[cubature Rcpp RcppParallel spatstat spatstat_utils]; };
-  dbplot = derive2 { name="dbplot"; version="0.1.1"; sha256="1nppk4fh20jhy94anx1jzmhrlnvyghiy217ydsvh7yy6pij3ax37"; depends=[dplyr rlang]; };
-  dbplyr = derive2 { name="dbplyr"; version="1.1.0"; sha256="17gn8vr4a6m9ynarjbm9xsrhcvgn5lnxhb2qhiiglmhh5mm4a7kv"; depends=[assertthat DBI dplyr glue purrr R6 rlang tibble]; };
+  dbplot = derive2 { name="dbplot"; version="0.2.0"; sha256="1yc75bqc0na44jrkmabbdvjhhcqz0cd09k1bgxh0wrg52h829ni5"; depends=[dplyr rlang]; };
+  dbplyr = derive2 { name="dbplyr"; version="1.2.1"; sha256="1nwrls9c3kc9q7405jp6b9sh23642sz13yw55iikgw134shffj5k"; depends=[assertthat DBI dplyr glue purrr R6 rlang tibble tidyselect]; };
   dbscan = derive2 { name="dbscan"; version="1.1-1"; sha256="09rh3x4g3xv5f1p8wbc847z8khj7v2r5vz9yf1lfdiy23q2w3xp1"; depends=[Rcpp]; };
   dbstats = derive2 { name="dbstats"; version="1.0.5"; sha256="0pr80mx8y87l96hhg0rp3ajxl7yx2f8qr0y1zrjkbzxavjmp9k34"; depends=[cluster pls]; };
   dc3net = derive2 { name="dc3net"; version="1.2.0"; sha256="19ibsvbnq6y88vqvgkm31zrqwjhpml59d792bz0zkk50r1q5bnyr"; depends=[c3net igraph RedeR]; };
   dcGOR = derive2 { name="dcGOR"; version="1.0.6"; sha256="0rvwa25r23yayx1i6xhkfaw2z85d2iyfx3slg3aq1m0fa7kj380p"; depends=[dnet igraph Matrix]; };
   dcemriS4 = derive2 { name="dcemriS4"; version="0.55"; sha256="15x4hjc5fwpn80h90q5x9a3p84pp3mxsmcx4hq5l0j52l9dy9nv3"; depends=[oro_nifti]; };
-  dclone = derive2 { name="dclone"; version="2.1-2"; sha256="0s3s46hvlsivfhrc559y0b3dc5m6g11cv3fwy4asigh8lqjc972d"; depends=[coda Matrix rjags snow]; };
+  dclone = derive2 { name="dclone"; version="2.1-3"; sha256="15jm5vsdpy4fzgrn1xgv4mjp02jblc7jba3d3375g5vfhzrm3zva"; depends=[coda Matrix rjags snow]; };
   dcminfo = derive2 { name="dcminfo"; version="0.1.7"; sha256="03r0ynzc5cck2rz20zbg5zx8v6s66ivizqav1pjkyvp6kxkmnf8q"; depends=[CDM]; };
   dcmle = derive2 { name="dcmle"; version="0.3-1"; sha256="1d6zk9413h30wcw8q1gnjzk67vshmjcpnh8zjxrsh1h69i1z6rpy"; depends=[coda dclone lattice]; };
   dcmodify = derive2 { name="dcmodify"; version="0.1.1"; sha256="1a909v6jhihwwmq7lzv2xazrkfa1553kbrjsbjfsh1qrqdiam3sr"; depends=[settings validate yaml]; };
   dcmr = derive2 { name="dcmr"; version="1.0"; sha256="1a89wr1n8sykjbwa316zlmcffaysksrqnbd89anxqj8sgw9xv6jq"; depends=[ggplot2 KFAS plyr reshape2 tableplot]; };
   dcv = derive2 { name="dcv"; version="0.1.1"; sha256="12c716x8dnxnqksibpmyysqp2axggvy9dpd55s9bhnsvqvi6dshj"; depends=[lmtest]; };
   ddR = derive2 { name="ddR"; version="0.1.2"; sha256="00mb9xq69dvl50v5429nw0mjazgjwh2sp98w8n2cwhhamjgp42k9"; depends=[Rcpp]; };
-  ddalpha = derive2 { name="ddalpha"; version="1.3.1"; sha256="0pczw9543y7f92m7gyk7rxcjn8vsjaldc5vl0r56ywip9i374zbh"; depends=[BH class MASS Rcpp robustbase sfsmisc]; };
+  ddalpha = derive2 { name="ddalpha"; version="1.3.1.1"; sha256="13w8ir5rd80rka4mq343zd4wn93vfw870lzfqrd3cxgwb1bwcw7y"; depends=[BH class MASS Rcpp robustbase sfsmisc]; };
   ddeploy = derive2 { name="ddeploy"; version="1.0.4"; sha256="06s4mn93sl33gldda9qab8l3nqig8zq0fh1s2f98igsysmn31br5"; depends=[httr jsonlite]; };
   ddpcr = derive2 { name="ddpcr"; version="1.8"; sha256="11bk4mhiqn73sjji2wz47v7jqqg9kq3amci9m6a88h4fvvgmpcz4"; depends=[dplyr DT ggplot2 lazyeval magrittr mixtools plyr readr shiny shinyjs]; };
   ddst = derive2 { name="ddst"; version="1.4"; sha256="1y0immm337adkd2bjx8c5pf02w9wysv3gj26f4qf0jiba0f2wk8n"; depends=[evd orthopolynom]; };
   deBInfer = derive2 { name="deBInfer"; version="0.4.1"; sha256="05khyjpyxwrm9q8jsysffgsjpjbw76w9rrl7i8ia0yc9lv0bzjc9"; depends=[coda deSolve MASS mvtnorm PBSddesolve plyr RColorBrewer truncdist]; };
+  deGradInfer = derive2 { name="deGradInfer"; version="1.0.0"; sha256="1wl1pw1rwins4gr47a8ii4diw6wd6cx8ib4l5bhri5f3crbw7l86"; depends=[deSolve gdata gptk]; };
   deSolve = derive2 { name="deSolve"; version="1.20"; sha256="18nx3maww979a8p8ly4hv63y65mnjx8vbj2fpipd6rhcbf1lbsan"; depends=[]; };
   deTestSet = derive2 { name="deTestSet"; version="1.1.5"; sha256="07wbgniwkpp0yry6wvchvszr8isxs1i9k6km951r5c009w1iviwk"; depends=[deSolve]; };
   deadband = derive2 { name="deadband"; version="0.1.0"; sha256="02pq3d0l0wy8bdlyfir3zf46j1ascx4qajyq5cf28yl62q6ngq5d"; depends=[TTR]; };
@@ -5346,12 +5457,11 @@ in with self; {
   deepboost = derive2 { name="deepboost"; version="0.1.6"; sha256="1nf9gjk9gjl2dz7cr3vh5lg8nxkbqwr82a132nw853axbdgbs9ga"; depends=[Rcpp]; };
   deepnet = derive2 { name="deepnet"; version="0.2"; sha256="09crwiq12wzwvdp3yxhc40vdh7hsnm4smqamnk4i6hli11ca90h4"; depends=[]; };
   default = derive2 { name="default"; version="1.0.0"; sha256="0hzxgp9la9kll5cw3m4gd02rii571xsn1v53kz407k7k6rfg5mda"; depends=[]; };
-  define = derive2 { name="define"; version="0.2.5"; sha256="11wrp20mdcmj4n2hbg9ws8z2myqk21pgcj0fin03gzc8qhmmaskd"; depends=[encode Hmisc latexpdf SASxport spec]; };
   deformula = derive2 { name="deformula"; version="0.1.1"; sha256="0h85yzl8kvjwrn1mkzyblvknf7gg8kx8y85qnvkwfbr9ik42ngn1"; depends=[]; };
-  defrostR = derive2 { name="defrostR"; version="1.0.0"; sha256="1ncj4qjbalb3v4kcp82wmik9p32lm5rc6cw2fqll88cni49mr62f"; depends=[XML]; };
+  defrostR = derive2 { name="defrostR"; version="1.1.0"; sha256="03asq36kd37592bjfb4mq0wfh2nkymrz1rxpq67ny1cq2159s83j"; depends=[XML]; };
   degenes = derive2 { name="degenes"; version="1.1"; sha256="1xxn5j06qizywimrp1pl8z3yjdy1a167b9jnm77gmv87rp6j240c"; depends=[]; };
   degreenet = derive2 { name="degreenet"; version="1.3-1"; sha256="0k0a1c1bv7zclrarfzf0d6avbd8zjnc3zd155jzmhi8dacr6r73w"; depends=[igraph network]; };
-  deisotoper = derive2 { name="deisotoper"; version="0.0.1"; sha256="0wv6zc73f038i8vwl03nhfiipdkn3599g8gw0fdp4a1fy61cp6m6"; depends=[rJava]; };
+  deisotoper = derive2 { name="deisotoper"; version="0.0.3"; sha256="1263cgwzgl3dnv1y9qhzjl4b7r69h59x38ggb7c8zn7g6qbdc0kc"; depends=[rJava]; };
   dejaVu = derive2 { name="dejaVu"; version="0.2.0"; sha256="1cnbgssdnvl092vz0j2n4bamvysrr0n9wy6ycz2mkm5wvf4r296i"; depends=[MASS]; };
   deldir = derive2 { name="deldir"; version="0.1-14"; sha256="12cjr4r50rdrh2l0105cvd42rqwzsmmiqcax3sbqk1ggh2lnblw9"; depends=[]; };
   delt = derive2 { name="delt"; version="0.8.2"; sha256="06g03wy9r2qvly0lnv5fv4k366mhlk56qkvak0xaxy99p1i34kmv"; depends=[denpro]; };
@@ -5362,12 +5472,12 @@ in with self; {
   demoKde = derive2 { name="demoKde"; version="0.9-4"; sha256="0p4v808m42wbv8ibdfqzm43cbbg0yl452wnm1mzqq2n37z6yljkr"; depends=[]; };
   demogR = derive2 { name="demogR"; version="0.5.0"; sha256="1y7pkf1m8fqjsvs0szyaqga2y7p3dvj0r85nz8nzqbmy4zrrv4w8"; depends=[]; };
   demography = derive2 { name="demography"; version="1.20"; sha256="097k0chs8shm1r9ny6jdx2kp2shyxsivjw1n1rhb3bs0m0l3vm9r"; depends=[cobs forecast ftsa mgcv rainbow RCurl strucchange]; };
-  dendextend = derive2 { name="dendextend"; version="1.6.0"; sha256="0pichh08zi12lpxzc061dmv4smj6lizygd1xymln8wfz18sf7923"; depends=[fpc ggplot2 magrittr viridis whisker]; };
-  dendroTools = derive2 { name="dendroTools"; version="0.0.4"; sha256="004446g3h0vdwif1jhgwy5x7lrjjkb9x0x0sqf5qaaxm90q2wzk9"; depends=[brnn caret dcv dplyr ggplot2 MLmetrics oce randomForest reshape reshape2 RWeka scales]; };
-  dendroextras = derive2 { name="dendroextras"; version="0.2.2"; sha256="1a42g29w9dvmwrfd244a8ixak6asbkqhzmggl0c4j5fkrp74fpll"; depends=[]; };
+  dendextend = derive2 { name="dendextend"; version="1.7.0"; sha256="1krvqadnnh53xx5ql7bwzxaif6a317jzbs1m00gnc6jnj03rfl5d"; depends=[fpc ggplot2 magrittr viridis whisker]; };
+  dendroTools = derive2 { name="dendroTools"; version="0.0.6"; sha256="0mqzlysp0kihs9ymz8y3agvjl6ihn996cmpw331c4jb5n7vhjx0r"; depends=[brnn caret dplyr ggplot2 gridExtra MLmetrics oce randomForest reshape reshape2 RWeka scales]; };
+  dendroextras = derive2 { name="dendroextras"; version="0.2.3"; sha256="0hb7crbgsnbcwvbk05iz5ik45n7zgysmwjj6xc46131yd8l0i1qx"; depends=[]; };
   dendrometeR = derive2 { name="dendrometeR"; version="1.0.0"; sha256="1par27ipgbfbrmdlwvkf82i5dgnfrcawmavakrf8lplin2hhb7gs"; depends=[forecast pspline zoo]; };
   dendsort = derive2 { name="dendsort"; version="0.3.3"; sha256="1m4qh79ppfvipmbi8m8vwq0hqmwwipbg5izihz5j6x8a4g5i6iym"; depends=[]; };
-  denoiSeq = derive2 { name="denoiSeq"; version="0.1.0"; sha256="0jsq8qz7bm314gsa3vyavh3ychicqsm5z9yj0vz0jgihmlrdqaxk"; depends=[]; };
+  denoiSeq = derive2 { name="denoiSeq"; version="0.1.1"; sha256="18w69gxbnazg5k8bzi76slcqxnbfmrndp548zazz8bpxz3jns699"; depends=[]; };
   denoiseR = derive2 { name="denoiseR"; version="1.0"; sha256="094nknr3hyx4kv18vnpdzrcpmfb4r7x9jgrp3p6x4nwrgzdh3r95"; depends=[FactoMineR irlba Matrix]; };
   denovolyzeR = derive2 { name="denovolyzeR"; version="0.2.0"; sha256="03ya5clzqp12lfhw073ri0pwgxn53a6pvnais317a8bv1yinxspb"; depends=[dplyr reshape2]; };
   denpro = derive2 { name="denpro"; version="0.9.2"; sha256="19hrpfd44jaavq81dbyj3frris4aflfc8lig0471whv0pc6jci2k"; depends=[]; };
@@ -5385,10 +5495,10 @@ in with self; {
   derivmkts = derive2 { name="derivmkts"; version="0.2.2"; sha256="00bcffqzzsm2h4gfwri772q8i7h40xhv07wl8xj682fnlk246ggs"; depends=[mnormt]; };
   desc = derive2 { name="desc"; version="1.1.1"; sha256="0k07qighac1xzmm8k988zi7i88a0yfvia3gk5hbz0fyvb2v9kzrj"; depends=[assertthat crayon R6 rprojroot]; };
   descomponer = derive2 { name="descomponer"; version="1.4"; sha256="12zpkixclm6jmrgzvcy48c1mdqh9dgadzf9026wjyamphxkkjbip"; depends=[taRifx]; };
-  descr = derive2 { name="descr"; version="1.1.3"; sha256="0fp91gbxxxvn2hqdyddhb3x85031wgq7gnqrhzjr956prlv086r6"; depends=[xtable]; };
+  descr = derive2 { name="descr"; version="1.1.4"; sha256="05maviw8l8qhmy7p80gs3dlyy6pqk5k1686ny4xla4psj8mr7lbk"; depends=[xtable]; };
   describer = derive2 { name="describer"; version="0.2.0"; sha256="1pjyihmn4gkaamixsc3qwynsc02pwv9bgn6s7z7acmmsybhhs6xn"; depends=[]; };
-  descriptr = derive2 { name="descriptr"; version="0.2.0"; sha256="1295pgw69v2r60pqff01mcrj619lg769y6x8dilwffl767w0d95n"; depends=[dplyr forcats magrittr tibble]; };
-  desctable = derive2 { name="desctable"; version="0.1.0"; sha256="002x4zjrcjz0xxh924z00rka1c61ldrj6lypakkf3p4hbwid6j30"; depends=[dplyr DT htmltools pander purrr]; };
+  descriptr = derive2 { name="descriptr"; version="0.4.0"; sha256="1v21fb90vhh7mjx9q29cbdvbxyi8sjcfbvdxf0xd8n7fkd6gd4yj"; depends=[dplyr forcats ggplot2 magrittr rlang scales shiny tibble tidyr]; };
+  desctable = derive2 { name="desctable"; version="0.1.1"; sha256="188pw8fjgm2g88nraagmxbnpv4gg89vm6mxm9w9vk88iq4hgbhjc"; depends=[dplyr DT htmltools pander purrr]; };
   deseasonalize = derive2 { name="deseasonalize"; version="1.35"; sha256="1fjsa7g34dckjs6mx9b10m99byxagggm0p9pw2f1vmpjqlasin0l"; depends=[FitAR lattice]; };
   desiR = derive2 { name="desiR"; version="1.2.1"; sha256="0ghcv96bbwn74mka4dpf2lkpnlikjn3q6lx2sl8bbw77nriap0n6"; depends=[]; };
   designGG = derive2 { name="designGG"; version="1.1"; sha256="1x043j36llwd7kd4skbpl2smz2ybsxjqf5yd1xwqmardq60gdv2w"; depends=[]; };
@@ -5397,22 +5507,25 @@ in with self; {
   desirability = derive2 { name="desirability"; version="2.1"; sha256="094gxvp6a60lfcc0a0gk9rv1p6ajnzq9m58sy8cvhcj5337g4fmk"; depends=[]; };
   desire = derive2 { name="desire"; version="1.0.7"; sha256="0jmj644nj6ck0gsk7c30af9wbg3asf0pqv1fny98irndqv508kf6"; depends=[loglognorm]; };
   desplot = derive2 { name="desplot"; version="1.3"; sha256="06aa4ijxk34z9v309jnsapa7bc95wx2g2hbasljwrb90f2z87wq9"; depends=[lattice reshape2]; };
-  detect = derive2 { name="detect"; version="0.4-0"; sha256="119kvkgpgd12v31ps1bg5dmc9djkaqzls548nlrvn1pbmahfnfx5"; depends=[Formula pbapply]; };
+  detect = derive2 { name="detect"; version="0.4-1"; sha256="0hq3imp4w6bd8x4njcfrvcs5lf0vrfnags1zdph86d7hlrwfds62"; depends=[Formula Matrix pbapply]; };
+  detectRUNS = derive2 { name="detectRUNS"; version="0.9.5"; sha256="0w4pz7waaabgsb47xcmgiz8bzlrs2a83y3v6j7bqb5125y1wn8hw"; depends=[data_table ggplot2 gridExtra iterators itertools plyr Rcpp reshape2]; };
   detector = derive2 { name="detector"; version="0.1.0"; sha256="010i063b94hzx7qac8gpl67gmk7hzgqm9i1c7pbbw4la3wcd9lz7"; depends=[stringr]; };
+  detpack = derive2 { name="detpack"; version="1.0.1"; sha256="00qyjhv7y5mk4h0a428i780fsvlamqnxv12kl6lqs776rhf0skfv"; depends=[]; };
   detrendeR = derive2 { name="detrendeR"; version="1.0.4"; sha256="1z10gf6mgqybb9ml6z3drq65n7g28h2pqpilc2h84l6y76sy909c"; depends=[dplR]; };
-  detrendr = derive2 { name="detrendr"; version="0.1.0"; sha256="1h092pivq6hk93mi9bbvcr8pjdmpry55ysxlbg7lhkh4ac6a0ryx"; depends=[abind BBmisc checkmate doParallel dplyr fields filesstrings foreach iterators magrittr purrr radiant_data Rcpp RcppParallel RSAGA tiff]; };
-  detzrcr = derive2 { name="detzrcr"; version="0.2.0"; sha256="10868k4vmc5n8y0xx123klp7hz6fnycsssg9nnq3nm1z36fmgcb7"; depends=[ggplot2 MASS shiny]; };
+  detrendr = derive2 { name="detrendr"; version="0.4.0"; sha256="0syxd5bds81ihm692bgps7wwl4n5fvi08jwd90hxaddksdskf2p6"; depends=[autothresholdr checkmate doParallel dplyr filesstrings foreach ijtiff iterators magrittr purrr Rcpp RcppParallel rlang RSAGA stringr]; };
+  detzrcr = derive2 { name="detzrcr"; version="0.2.1"; sha256="1y1lbckm4a4m50x2a47r1wk47z4m4pvkslwgzcvw00nch47h9d8s"; depends=[ggplot2 MASS shiny]; };
   devEMF = derive2 { name="devEMF"; version="3.6"; sha256="1n5i68f1j3d5yp0p0845zsvr4xhjrvj610wsb5rrlf90jwnarsx2"; depends=[]; };
-  devRate = derive2 { name="devRate"; version="0.1.5"; sha256="04ka09ic8ai7c4qx448win2k311ih588xmxdj0k38nidl7gknsc2"; depends=[]; };
-  devtools = derive2 { name="devtools"; version="1.13.4"; sha256="1az1qf50vyhm4w6k2a6wqw3pqc8jv2iqzdhs36cg079hx9swm0mb"; depends=[digest git2r httr jsonlite memoise rstudioapi whisker withr]; };
-  dexter = derive2 { name="dexter"; version="0.5.1"; sha256="0nkm3yjv86kmyv433c0mm2g30f053v0wqf2hddymm2l12cqm5lp2"; depends=[colorspace DBI dbplyr dplyr DT fastmatch purrr rlang rprintf RSQLite shiny shinyBS shinydashboard tidyr]; };
+  devFunc = derive2 { name="devFunc"; version="0.1"; sha256="0f2s5gssk9napmah7zcss1rnh7pzlq90gzwcnvyr9rrq6k118n8q"; depends=[plyr stringr]; };
+  devRate = derive2 { name="devRate"; version="0.1.6"; sha256="0wm6nqnr76azpwg00cspi4n8r4w5qfkvm5qqp0kshv701pnbsjbp"; depends=[]; };
+  devtools = derive2 { name="devtools"; version="1.13.5"; sha256="1x3wsk7dh3yakii61kbfvafx9yz66h40ixiwfkf03dnp2n24hngs"; depends=[digest git2r httr jsonlite memoise rstudioapi whisker withr]; };
+  dexter = derive2 { name="dexter"; version="0.6.0"; sha256="1qz4j33y6n115gijxs1jg5712g8cmsv7406cx6bsm2zswvv7ra22"; depends=[colorspace DBI dbplyr dplyr DT fastmatch purrr RColorBrewer rlang rprintf RSQLite shiny shinyBS shinydashboard tibble tidyr]; };
   df2json = derive2 { name="df2json"; version="0.0.2"; sha256="10m7xn7rm4aql1bzpckjcx5kvdw44m1pxgzqkgkd40lzqb1cwk18"; depends=[rjson]; };
   dfCompare = derive2 { name="dfCompare"; version="1.0.0"; sha256="1lhx69j0bkjbnp5jz23hrbxjcf04vf3big4k593ixz003xs2077f"; depends=[]; };
-  dfcomb = derive2 { name="dfcomb"; version="2.3"; sha256="0bgbjqv15y0wv48zzkc8pssyadcbrqy1chddiq3l91499kcw9ya6"; depends=[BH Rcpp RcppArmadillo RcppProgress]; };
+  dfcomb = derive2 { name="dfcomb"; version="2.4-2"; sha256="163sc18ka4wkf208ml7ghjsn43b3mbyf9zm4id563az6ckkzw45p"; depends=[BH Rcpp RcppArmadillo RcppProgress]; };
   dfcrm = derive2 { name="dfcrm"; version="0.2-2"; sha256="1kwgxfqnz2bcicyb27lp6bnvrj30lqjpn5fg7kaqshgkj53g0s4f"; depends=[]; };
   dfexplore = derive2 { name="dfexplore"; version="0.2.1"; sha256="04nbhn59l1kas26nwj4qflkjvvr33sj1mm7zg7fhvya85gvlhrbf"; depends=[ggplot2]; };
-  dfmta = derive2 { name="dfmta"; version="1.5"; sha256="1npa7hvcaimhjp31hbvwj1xhriryghwny3nnnp7vpvmy54i7hx84"; depends=[BH Rcpp RcppArmadillo RcppProgress]; };
-  dfoptim = derive2 { name="dfoptim"; version="2016.7-1"; sha256="1hs0ln5iz3h1x1b27jai83r3gad6698zwhr2jgpviiv9zwhic8c2"; depends=[]; };
+  dfmta = derive2 { name="dfmta"; version="1.6-2"; sha256="0icpgsxhzd9y0d3xv82cy807wylxck7zn31g0b3nv0nq3jxy04jk"; depends=[BH Rcpp RcppArmadillo RcppProgress]; };
+  dfoptim = derive2 { name="dfoptim"; version="2017.12-1"; sha256="03sh92ks29hcdy4ma1b5rs29f65q65wi30j1pxkmsjxkp8179jgf"; depends=[]; };
   dfped = derive2 { name="dfped"; version="1.0"; sha256="0xhyh5sm1a009pwfn2yb3vg2hr4sfpf9ifg09hqcvjx56pxfd8zh"; depends=[ggplot2 rstan]; };
   dfphase1 = derive2 { name="dfphase1"; version="1.1.1"; sha256="0bk4bl5lqd7m4mzk6kg71fmh918wcy85zghr3lyayxlk30fl4ppc"; depends=[lattice Rcpp robustbase]; };
   dfpk = derive2 { name="dfpk"; version="3.4.0"; sha256="0fvvyn1zc0s0z4xaqinf8im2ynmbs7irh9q9h66ym1pxmrqhb5zw"; depends=[BH dfcrm ggplot2 PK Rcpp RcppEigen rstan StanHeaders]; };
@@ -5421,19 +5534,18 @@ in with self; {
   dglars = derive2 { name="dglars"; version="2.0.0"; sha256="0nhljv02cfsna4d220nhla4fs84hr30qs9j32mml0brnmazyjj0n"; depends=[Matrix]; };
   dglm = derive2 { name="dglm"; version="1.8.3"; sha256="0vj4vddqcrjzgqsi6zsxm22gj5pa5dm50wcxip4vi8kbwxaahnaj"; depends=[statmod]; };
   dgmb = derive2 { name="dgmb"; version="1.2"; sha256="1r5md917wipx78n63x87fpvsc3h87c68cpacrrs9dhss199p1a5k"; depends=[abind MASS]; };
-  dgo = derive2 { name="dgo"; version="0.2.11"; sha256="1x29qmkq7jvxg8z6h36qxiznqpg9iygn3i4zb22infyyi85vplpy"; depends=[assertthat data_table dgodata ggplot2 lubridate R6 rstan survey]; };
+  dgo = derive2 { name="dgo"; version="0.2.14"; sha256="0pizzyqgnng3g5g9q2qa5wcwfdl94rz69ah071qx01k03fzayg86"; depends=[assertthat data_table dgodata ggplot2 lubridate R6 rstan survey]; };
   dgodata = derive2 { name="dgodata"; version="0.0.2"; sha256="03cyiig8pn7fdkrkrd29cwy5g63bp57bpl9jmdxfi03smngzbz0m"; depends=[]; };
   dgof = derive2 { name="dgof"; version="1.2"; sha256="02qnb3i131hx05k8l5n3xbl5sqmmc2fh19bsgcacgj8ixs4wyjvi"; depends=[]; };
   dhga = derive2 { name="dhga"; version="0.1"; sha256="1n48irj53g3kn451ak5ly50wxdn7qmzi2kib8clsvcx2n7mvpgcm"; depends=[VennDiagram]; };
   dhglm = derive2 { name="dhglm"; version="1.7"; sha256="09wasgvjw0xc9k68m6a8lx372p2hywk4j6ikr9wjjjfl6f17j1cw"; depends=[boot MASS Matrix numDeriv]; };
   di = derive2 { name="di"; version="1.1.3"; sha256="1i3s1rw62iy49141b3lqy5d97iwcj6ihdhsz2716v2497c39qhhy"; depends=[scales]; };
-  diagis = derive2 { name="diagis"; version="0.1.3"; sha256="0ni7xqpnzr5drdw12sslm7d7amwzaifhlr2pw6b4f264wcab72i8"; depends=[coda ggplot2 gridExtra Rcpp RcppArmadillo]; };
+  diagis = derive2 { name="diagis"; version="0.1.3-1"; sha256="1cagcr5znhrg4fp96d79ly0z7bs3hhh3zfspclyfc88p2p3qsd96"; depends=[coda ggplot2 gridExtra Rcpp RcppArmadillo]; };
   diagonals = derive2 { name="diagonals"; version="0.4.0"; sha256="03n6lm0hkgylswgj1qlgrjigm7basl5frip99mxx19mvaqa3bhqy"; depends=[]; };
   diagram = derive2 { name="diagram"; version="1.6.4"; sha256="0f6ffprn5k0ir1s7m9s7izc64aa17r3gnygagz5bihrlsvawaavw"; depends=[shape]; };
   diaplt = derive2 { name="diaplt"; version="1.2.1"; sha256="0pya6rqzsvc5nd3smhydvabarglc4nn04q605vbllmbhq9rv00pa"; depends=[]; };
   dice = derive2 { name="dice"; version="1.2"; sha256="0gic7lqnsdmwv3dbzwwmcwdfyfqlq8kpr2pciqphd1j2ligzwl3s"; depends=[gtools]; };
-  diceR = derive2 { name="diceR"; version="0.2.0"; sha256="0ppalp0nlg6xcp1q2zi6l33bkkh1f4fjmfj38401h13bz2lhhkri"; depends=[abind apcluster assertthat blockcluster caret class clue cluster clusterCrit clValid dbscan dplyr e1071 flux ggplot2 gplots Hmisc infotheo kernlab klaR kohonen largeVis magrittr mclust NMF progress purrr quantable RankAggreg RColorBrewer Rcpp Rtsne sigclust tidyr]; };
-  dicecrawler = derive2 { name="dicecrawler"; version="0.1.0"; sha256="04cfzc6qldfaga4mj7bw8hdbznl6jr5h91nq20c74khv5g7vas7m"; depends=[curl jsonlite rvest xml2]; };
+  diceR = derive2 { name="diceR"; version="0.3.2"; sha256="1mhn34p0m0iaz9z4xy20z48nrnrh84i1bdhl48zmnwx165vbg392"; depends=[abind apcluster assertthat blockcluster caret class cli clue cluster clusterCrit clValid dbscan dplyr e1071 flux ggplot2 gplots Hmisc infotheo kernlab klaR kohonen largeVis magrittr mclust NMF progress purrr quantable RankAggreg RColorBrewer Rcpp Rtsne sigclust stringr tibble tidyr]; };
   dichromat = derive2 { name="dichromat"; version="2.0-0"; sha256="1l8db1nk29ccqg3mkbafvfiw0775iq4gapysf88xq2zp6spiw59i"; depends=[]; };
   dicionariosIBGE = derive2 { name="dicionariosIBGE"; version="1.6"; sha256="1rss1ydhcn6sma2lmlpq6s0h3dglwc20w499x1jzkcjnzc1rc7gl"; depends=[]; };
   didrooRFM = derive2 { name="didrooRFM"; version="1.0.0"; sha256="12clfnbm56jwldw0afb0nb0argnd97mx7369jiywhxy0p4xqibqq"; depends=[dplyr]; };
@@ -5449,15 +5561,16 @@ in with self; {
   diffMeshGP = derive2 { name="diffMeshGP"; version="0.1.0"; sha256="1dc37hxh3fi27gw11kij57j78p87bza77s82niagdv6dqhldj5a4"; depends=[]; };
   diffdepprop = derive2 { name="diffdepprop"; version="0.1-9"; sha256="0mgrm1isr26v2mcm6fkzc7443ji00vpnqmw4zngx81n7442b3cl2"; depends=[gee PropCIs rootSolve]; };
   diffeR = derive2 { name="diffeR"; version="0.0-4"; sha256="08g21h3yq8rm2i6ah364nfadg7hnghc21jnpi5aqwzqyd2v93b67"; depends=[ggplot2 raster rgdal]; };
-  diffobj = derive2 { name="diffobj"; version="0.1.7"; sha256="0a90jd9y0sifna2hjjrbzmma8kd1nb73c97yapcr2dfpcqdrfkhv"; depends=[crayon]; };
+  diffobj = derive2 { name="diffobj"; version="0.1.9"; sha256="1adqn472qbwrfb8m2iy3sfvj2n8g3d4h6xc3hqxpbv03yyfia2c2"; depends=[crayon]; };
   diffpriv = derive2 { name="diffpriv"; version="0.4.2"; sha256="12q2v93369bshid83rsy1csbr9ay6rfpd8zdxm12zi7py3f9sjs8"; depends=[gsl]; };
   diffr = derive2 { name="diffr"; version="0.1"; sha256="0ydwnpyzirynffsnvip667y0jqzy7yfqlfpqhb38xvmd9rmwfbp8"; depends=[htmlwidgets]; };
   diffractometry = derive2 { name="diffractometry"; version="0.1-8"; sha256="1m6cyf1kxm9xf1z4mn4iz0ggiy9wcyi8ysbgcsk7l78y7nqh1h99"; depends=[]; };
   diffrprojects = derive2 { name="diffrprojects"; version="0.1.14"; sha256="1mnqf5zs1w8dx9y5iwn4blyzb9j60ayzc04zxj5l8804nd527n25"; depends=[dplyr hellno magrittr R6 Rcpp RSQLite rtext stringb stringdist]; };
   diffrprojectswidget = derive2 { name="diffrprojectswidget"; version="0.1.5"; sha256="1h69mc1wayi80vz4b9cqydylf4kp9mxsigv05r0f903pqakdrzcw"; depends=[diffrprojects dplyr hellno htmlwidgets jsonlite magrittr tidyr]; };
+  diffusion = derive2 { name="diffusion"; version="0.2.7"; sha256="1j9s9vw5sc4k956bk4yp3bf4fnp7lhhkwcvlzvsh1w4dyaj8l35h"; depends=[dfoptim nloptr systemfit]; };
   diffusionMap = derive2 { name="diffusionMap"; version="1.1-0"; sha256="1l985q2hfc8ss5afajik4p25dx628yikvhdimz5s0pql800q2yv3"; depends=[igraph Matrix scatterplot3d]; };
   diffusr = derive2 { name="diffusr"; version="0.1.2"; sha256="1rvfbs757rngxz7z3kq82nwls26qx35gkjiv1laay06kjs9qrgy5"; depends=[igraph Rcpp RcppEigen]; };
-  digest = derive2 { name="digest"; version="0.6.12"; sha256="1awy9phxdvqnadby7rvwy2hkbrj210bqf4xvi27asdq028zlcyd4"; depends=[]; };
+  digest = derive2 { name="digest"; version="0.6.15"; sha256="1ia4ak956gnn0f5aqhwgam6g9z6f1y57zz8jv45jc8h79yxp8bl8"; depends=[]; };
   digitalPCR = derive2 { name="digitalPCR"; version="1.1.0"; sha256="0hwqq84yr1hnvf4bygc5425887dhqjjjyy1ils71iavcal04s8pb"; depends=[]; };
   digitize = derive2 { name="digitize"; version="0.0.4"; sha256="1qw4x4z9vrs79sd9b2daw668nc6nvjl4qhayfqmd87yxa2ydv6x0"; depends=[readbitmap]; };
   dils = derive2 { name="dils"; version="0.8.1"; sha256="1q6ba9j14hzf7xy895mzxc6n9yjgind55jf350iqscwzxf7ynp33"; depends=[igraph Rcpp]; };
@@ -5467,10 +5580,11 @@ in with self; {
   diptest = derive2 { name="diptest"; version="0.75-7"; sha256="0rcgycgp0bf8vhga1wwgfcz3pqs5l26hgzsgf2f97dwfna40i1p1"; depends=[]; };
   directPA = derive2 { name="directPA"; version="1.3"; sha256="0hcs56y69gdkfyk2xl0vxh01c19s6z1lfv02g056wxr24qfsx08c"; depends=[calibrate rgl]; };
   directlabels = derive2 { name="directlabels"; version="2017.03.31"; sha256="01ahw0c56mnzwl611s8hnghicww4c4dgf5v2wv6bl1s1pramw9pr"; depends=[quadprog]; };
+  dirichletprocess = derive2 { name="dirichletprocess"; version="0.2.0"; sha256="1q6rnrzyvkz9hn9czlm9sha80qsmrz7n4l3r8r1plkgrnf0biajv"; depends=[ggplot2 gtools mvtnorm]; };
   dirmcmc = derive2 { name="dirmcmc"; version="1.3.3"; sha256="117p3jvinmha7a2phcpzq38ig05kcranp15xbxqvv0cgh3c95fjr"; depends=[mcmcse]; };
   dirmult = derive2 { name="dirmult"; version="0.1.3-4"; sha256="1r9bhw1z0c1cgfv7jc0pvdx3fpnwplkxwz8j8jjvw14zyx803rnz"; depends=[]; };
   discSurv = derive2 { name="discSurv"; version="1.1.7"; sha256="0shxwxbvbbgp0qphpbih582d5psqj5n0izv7zvcw97vh82bzra4l"; depends=[functional mgcv mvtnorm]; };
-  discgolf = derive2 { name="discgolf"; version="0.1.0"; sha256="15bk2k7glahcbz4kyl3fiayi7ck6z3wabl9y25fg6cnxkbyh6dbn"; depends=[httr jsonlite xml2]; };
+  discgolf = derive2 { name="discgolf"; version="0.2.0"; sha256="07clh1awnibgrh7vl4a51r8dbya2rbmicm8v8x8mq8h8am2b3j0s"; depends=[crul jsonlite xml2]; };
   disclap = derive2 { name="disclap"; version="1.5"; sha256="0piv9gxhxcd4pbh5qjn9c3199f32y3qiw5vy8cr77ki70dnmr66n"; depends=[]; };
   disclapmix = derive2 { name="disclapmix"; version="1.6.2"; sha256="01pn8hy3xbf1b1fbbsd4n2hv7gs97zalgq858xsrr4a0nqrvxmn5"; depends=[cluster disclap Rcpp]; };
   disco = derive2 { name="disco"; version="0.5"; sha256="1rjylqmijc8yg20hkhqh24asxzs2g55dgbh4scp60nsf2lnw1pz8"; depends=[ggplot2 RColorBrewer tmod]; };
@@ -5489,6 +5603,7 @@ in with self; {
   dispmod = derive2 { name="dispmod"; version="1.1"; sha256="141gzhnmxxl495cpjgd4wnvdrbz6715m6sd1pycrbaqrsdc1pv57"; depends=[]; };
   disposables = derive2 { name="disposables"; version="1.0.3"; sha256="0q5wacjclspn2fh7z1pg2l67ll51n75wck5h2fdq2vxy3qn3vwis"; depends=[]; };
   dissUtils = derive2 { name="dissUtils"; version="1.0"; sha256="00fzlmkdfw2s3k824wp2pk3v7cvxnywi1hfp86g4mm95z2qlw9br"; depends=[]; };
+  dissever = derive2 { name="dissever"; version="0.2-2"; sha256="0s4g84lq15i00vpaafwmcbspdqy23cbj2fbyfnq60mzllyzgs0n2"; depends=[boot caret dplyr foreach magrittr plyr raster sp viridis]; };
   distance_sample_size = derive2 { name="distance.sample.size"; version="0.0"; sha256="0hlf3kp34rg1gnkxp4k3rnv0shv4fpgb0rhx3a6x5692lhyigbcs"; depends=[MASS]; };
   distances = derive2 { name="distances"; version="0.1.2"; sha256="17872h4jw6cgdk40vczjlygnays2v0wdh64mz5isk7zkvqs0x1ld"; depends=[]; };
   distcomp = derive2 { name="distcomp"; version="1.0-1"; sha256="0f69bxw52ai39dmkmfvrs0lbibcgmv6n849xa9xgd2jm5mvbc58f"; depends=[digest httr jsonlite R6 shiny stringr survival]; };
@@ -5506,14 +5621,14 @@ in with self; {
   distrSim = derive2 { name="distrSim"; version="2.6"; sha256="1kq85ivnw4mplpr2jmc2w19kvk0d1wffz6laypay2j5gyd8fm44x"; depends=[distr setRNG startupmsg]; };
   distrTEst = derive2 { name="distrTEst"; version="2.6"; sha256="1c0xwpyr5gs89psiflcz5dplsb1g9r651jiqg8nxcqa05r9kyhkr"; depends=[distrSim setRNG startupmsg]; };
   distrTeach = derive2 { name="distrTeach"; version="2.6.1"; sha256="0x60xlij1m9q7xhi9vnf61vb2px9aah8iqaki6d87c1pxylmqnvr"; depends=[distr distrEx startupmsg]; };
-  distrom = derive2 { name="distrom"; version="0.3-3"; sha256="1kpbrsa7ml72zvmdcpbbz2rsv4lpqd5i2w3v488ji6nbi44v1gp6"; depends=[gamlr Matrix]; };
+  distrom = derive2 { name="distrom"; version="1.0"; sha256="0wylw7yaylf5j8cy8g45jrw91mwx6w0i7vf9ysnj5kxyznq1gl6y"; depends=[gamlr Matrix]; };
   distrr = derive2 { name="distrr"; version="0.0.4"; sha256="0nywvgcbk2i2n2qa80yk68zikl2fs7nybhq540808rjksldh9pvy"; depends=[dplyr lazyeval magrittr tidyr]; };
   divagis = derive2 { name="divagis"; version="1.0.0"; sha256="1kcz7i3h9xxpqhlq0rl08pgcwd16ygjjmm0jjv9knn2ggc3j1jzz"; depends=[rgdal sp]; };
-  diveMove = derive2 { name="diveMove"; version="1.4.3"; sha256="18420gm1cb0pinp05n08cj5qgf9rmn5ksr7bfq464s61isrhmzhy"; depends=[caTools geosphere KernSmooth quantreg uniReg]; };
+  diveMove = derive2 { name="diveMove"; version="1.4.4"; sha256="0mq3nkcn1w8mry9lda6fkycb1a5qmkyzpckwxbrvsyc5kyyx755c"; depends=[caTools geosphere KernSmooth quantreg uniReg]; };
   diveRsity = derive2 { name="diveRsity"; version="1.9.90"; sha256="11pfq3syvjmfwfimjc2jnlprcnynvargr4yjd8h0aa6qzgdrrx5q"; depends=[ggplot2 qgraph Rcpp shiny]; };
   diverse = derive2 { name="diverse"; version="0.1.5"; sha256="10kmx3qv58xhqs1icsxqq0y0cm8y2hx9ysb65brd3hhg33alzvk3"; depends=[foreign proxy reshape2]; };
   diversitree = derive2 { name="diversitree"; version="0.9-10"; sha256="0gh4rcrp0an3jh8915i1fsxlgyfk7njywgbd5ln5r2jhr085kpz7"; depends=[ape deSolve Rcpp subplex]; };
-  divest = derive2 { name="divest"; version="0.4.1"; sha256="08ifl924392lnq96j6r25x0ji18jcx6chg3bmbv9gh783vwv476b"; depends=[Rcpp RNifti]; };
+  divest = derive2 { name="divest"; version="0.5.0"; sha256="07qv8zjhajyjc7yhm3kk33xj806rxv92810d52gvk4iwgmgczl78"; depends=[Rcpp RNifti]; };
   divo = derive2 { name="divo"; version="1.0.0"; sha256="0xy4yxvx2grskdzb5z73mhgrq0nfhdkm2hxahdns7pb1fgajxyjx"; depends=[cluster]; };
   dixon = derive2 { name="dixon"; version="0.0-6"; sha256="1prvr16a9n7qyaznir2bl7mg6nlvbdv9pk75p3xipzjg36hwyam8"; depends=[spatstat splancs]; };
   dkDNA = derive2 { name="dkDNA"; version="0.1.1"; sha256="0ycyzn5bmhjl5idp0lndffkninpm9n23wrkrzi59ac8z8ghsnhf4"; depends=[]; };
@@ -5521,41 +5636,40 @@ in with self; {
   dlm = derive2 { name="dlm"; version="1.1-4"; sha256="0hyphl90bqc16j7in750pmiyq28hmc46kxgv7gj17c8xl9c9xqxm"; depends=[]; };
   dlmap = derive2 { name="dlmap"; version="1.13"; sha256="0s6wlkggkm3qndwyvw72xv1n0mcjb7ss3ajbq2ll6rv30splq0db"; depends=[ibdreg mgcv nlme qtl wgaim]; };
   dlmodeler = derive2 { name="dlmodeler"; version="1.4-2"; sha256="06gqvk2wrzz4kpsh4vyrbqwmxirsvg78qj7clvcxdac0sfqn4gl7"; depends=[KFAS]; };
-  dlnm = derive2 { name="dlnm"; version="2.3.2"; sha256="1gkpdy1mgnhiabfrfi41p3n8kzh2l480qrf3v50n8p3xcjamiagp"; depends=[mgcv nlme tsModel]; };
-  dlsem = derive2 { name="dlsem"; version="1.9"; sha256="1j72w9lpxsmlf39458pq72mgy6yz4rnsyx4d7s08rvl1jh32a8ni"; depends=[graph gRbase nnet Rgraphviz]; };
+  dlnm = derive2 { name="dlnm"; version="2.3.4"; sha256="08k9x29iakgnzf4zbj6bgv6i4812mhbgraxm468wvv8ia574dm1m"; depends=[mgcv nlme tsModel]; };
+  dlsem = derive2 { name="dlsem"; version="2.1"; sha256="17azc4b8lxy7bcsrpki17nbc4imyfzvq6fmvngw80xjxlc316agx"; depends=[graph gRbase Rgraphviz]; };
   dlstats = derive2 { name="dlstats"; version="0.1.0"; sha256="0s92rdpw3m534wgjaic4srsp9i1pa3ibfmr4h7p3ly51zhza6l5h"; depends=[ggplot2 jsonlite magrittr RColorBrewer scales]; };
   dma = derive2 { name="dma"; version="1.3-0"; sha256="12gjrk0dp5w49wf0zkwc16vf8hd82822k88zb9fax3dklwm1dd3p"; depends=[MASS mnormt]; };
   dml = derive2 { name="dml"; version="1.1.0"; sha256="0z1dalgxh5nhrac49vh60d5awzjylc8b8mn5fk379c324milm59l"; depends=[lfda MASS]; };
-  dmm = derive2 { name="dmm"; version="2.1-2"; sha256="0z4irgm8wlyb31xmmwcknjn1jg76j5kyfqyqpbykcgvnp29mip54"; depends=[MASS Matrix nadiv pls robustbase]; };
+  dmm = derive2 { name="dmm"; version="2.1-3"; sha256="0hxd4k721imicnc97h319gxs6n4plyl9y9sr5hc7pwas543dm7k3"; depends=[MASS Matrix nadiv pls robustbase]; };
   dmt = derive2 { name="dmt"; version="0.8.20"; sha256="0rwc8l9k2y46hslsb3y8a1g2yjxalcvp1l3v7jix0c5kz2q7917w"; depends=[MASS Matrix mvtnorm]; };
   dmutate = derive2 { name="dmutate"; version="0.1.2"; sha256="06gr49j5jz6ns1zydwsqysgkigi2sbm4hdd2jbb82f05rd9spyf3"; depends=[dplyr MASS]; };
   dna = derive2 { name="dna"; version="1.1-1"; sha256="0gw70h1j67h401hdvd38d6jz71x1a6xlz6ziba6961zy6m3k5xbm"; depends=[]; };
-  dnc = derive2 { name="dnc"; version="1.2"; sha256="0a0nc1yx6vhbjsik9pidda97i7s6ndlsm8pzx29ccmxlmqncc18b"; depends=[BayesLogit igraph MCMCpack movMF plot3D plot3Drgl Rcpp RcppArmadillo skmeans vegan]; };
-  dnet = derive2 { name="dnet"; version="1.1.1"; sha256="1pj31586li19dybfvwljmpv18k6k2mvrx6g0a8rjjdcqczasf8yr"; depends=[graph igraph Matrix Rgraphviz supraHex]; };
+  dnet = derive2 { name="dnet"; version="1.1.2"; sha256="0y31cj55ry3xv4p7hy3maynk6ds8kmmgr2fd5afqhlrjkfry7zan"; depends=[graph igraph Matrix Rgraphviz supraHex]; };
   dng = derive2 { name="dng"; version="0.1.1"; sha256="04r06k6mmif7kbpham52dq2zv5rijjnsdc3sgxz6kbh5mqdn6jfq"; depends=[Rcpp]; };
   doBy = derive2 { name="doBy"; version="4.5-15"; sha256="0n1ml47f78nqhy92a0fgsb4brz0qyfr4q3c7im8pnb0ngia4ssdx"; depends=[MASS Matrix]; };
   doFuture = derive2 { name="doFuture"; version="0.6.0"; sha256="04pvs2h1ibdbl6cph30rvdn5vzj9afllvh8f0iy64pgy83vls790"; depends=[foreach future iterators]; };
-  doMC = derive2 { name="doMC"; version="1.3.4"; sha256="0y47jl6g4f83r14pj8bafdzq1phj7bxy5dwyz3k43d2rr8phk8bn"; depends=[foreach iterators]; };
+  doMC = derive2 { name="doMC"; version="1.3.5"; sha256="1vfrykvfvsyq12mypd266867ml1dcwc3rj5k9c3wrn5bddcm88kr"; depends=[foreach iterators]; };
   doMPI = derive2 { name="doMPI"; version="0.2.2"; sha256="0ahwm17p3gq1yvc8v6sr6sb8z7i6zws8d1pf46qynl0gd4amg938"; depends=[foreach iterators Rmpi]; };
   doParallel = derive2 { name="doParallel"; version="1.0.11"; sha256="0sppgxk3d8mfsrb3cjdyn0mv0s4i7pcy8g8c3cjzbr6k8vmx5jsc"; depends=[foreach iterators]; };
   doRNG = derive2 { name="doRNG"; version="1.6.6"; sha256="0xnqrc74qncg5iv4cvq0vh3r1sd407wvzx0hfpy8j2rcqy12574k"; depends=[foreach iterators pkgmaker rngtools]; };
   doRedis = derive2 { name="doRedis"; version="1.1.1"; sha256="10ldfzq6m83b9w24az9bf5wbfm6y9gi233s8qgsk4dnr84n3nizx"; depends=[foreach iterators rredis]; };
-  doSNOW = derive2 { name="doSNOW"; version="1.0.15"; sha256="1xfnv3infhlwb4yqi53raj0212l8fgcgwgzm0kxlyf8rzjflm9rm"; depends=[foreach iterators snow]; };
-  dobson = derive2 { name="dobson"; version="0.1"; sha256="0w7bkk3v9j455zzmidjgxsqqwgd44wzz1akhjgc3p71ilsyh0sff"; depends=[]; };
+  doSNOW = derive2 { name="doSNOW"; version="1.0.16"; sha256="13ir4a8252h4yvp5ir9xnwack1kn58i4ny6sf2qdc12zspn3850n"; depends=[foreach iterators snow]; };
+  dobson = derive2 { name="dobson"; version="0.2"; sha256="1fyf4dyzpg6hqdvr8n4ncs4dny8mg23nxbd49jd3mrlajszzg0vp"; depends=[]; };
   docker = derive2 { name="docker"; version="0.0.2"; sha256="00zq4zmv2y6q069q92dn8db2bj96kfy7pv2s58q21dxkp1c4s6qg"; depends=[reticulate]; };
   docopt = derive2 { name="docopt"; version="0.4.5"; sha256="1pwng6018ls0hk785bs8yjwpzsqr2pcvzgpavqd9rw19n5lvzhxn"; depends=[stringr]; };
   docopulae = derive2 { name="docopulae"; version="0.3.3"; sha256="13889sj509gbl9zs7jqdvslp6sc81jv54cbqh1wpp834jp5s1q3x"; depends=[]; };
   docstring = derive2 { name="docstring"; version="1.0.0"; sha256="19z5frhxbdc5c4vrkckgqbh9mx4d9w1icw8szsw9yadvbg48nlhl"; depends=[roxygen2]; };
   docuSignr = derive2 { name="docuSignr"; version="0.0.3"; sha256="0q90z31svbdnvylfr0yj2f0gahvpi089c1d5llvwqy8qc5p9fbqw"; depends=[httr jsonlite magrittr]; };
   documair = derive2 { name="documair"; version="0.6-0"; sha256="1pphcbx90n9xn8a7gvfrwzfapwqgpbl3gg2grm7chfxgcp7i99i2"; depends=[]; };
-  document = derive2 { name="document"; version="2.1.0"; sha256="1f9dr6kvmdb3lgxka2j5jr3ar1p4h0f2f7a1qqbq8a69s7f4qa7z"; depends=[callr checkmate devtools roxygen2 rstudioapi]; };
+  document = derive2 { name="document"; version="3.0.0"; sha256="1jd7pgifnlffibmmsflgp0gbv83qclqsfi8glvr9kfxw66yx0mhq"; depends=[callr checkmate desc rcmdcheck roxygen2 rstudioapi withr]; };
   docxtools = derive2 { name="docxtools"; version="0.1.1"; sha256="1mlgl9105mifzdgf57spgr2rr5740ghr5afmlskxn6ind7jfka70"; depends=[dplyr ggplot2 pander stringr tidyr]; };
   docxtractr = derive2 { name="docxtractr"; version="0.2.0"; sha256="197j57ab8x960b1yfq6xp8fwmq51xs04nf0cb16r161h4bcmgs2j"; depends=[dplyr purrr tibble xml2]; };
   dodgr = derive2 { name="dodgr"; version="0.0.3"; sha256="161qy9iyszpb44v26zn6w4d7c9bw8pg7vwgqcba0k0xc5dnr2wjc"; depends=[igraph magrittr osmdata rbenchmark Rcpp sp]; };
   domino = derive2 { name="domino"; version="0.3.1"; sha256="0f67w0z5jy82kgm3l1rji430ayigw30vmmwp3i1nz0xibsx7jxv4"; depends=[]; };
   dosresmeta = derive2 { name="dosresmeta"; version="2.0.1"; sha256="0qdalzdk7q4wx3vl5f3i64m8cb7vhi4pqzghar32j0a7l6gla04z"; depends=[mvmeta]; };
   dostats = derive2 { name="dostats"; version="1.3.2"; sha256="15j9sik9j5pic5wrp0w26xkrhi337xkbikw0k7sa4yfimw6f84w5"; depends=[]; };
-  dotCall64 = derive2 { name="dotCall64"; version="0.9-04"; sha256="0qp6magpp0jaa0b9sfkbxd91afayl24kj0yrh0ix1v3ahdnaar8f"; depends=[]; };
+  dotCall64 = derive2 { name="dotCall64"; version="0.9-5.2"; sha256="1jw0kyw95nivjimh25ri9sigqwlvk12kd45ydsh1yggigzc0k23k"; depends=[]; };
   dotenv = derive2 { name="dotenv"; version="1.0.2"; sha256="13i8dimrgq9nxmmrxr42pacsiylj6dilwpa8ldnrfp4cl9zgrqas"; depends=[]; };
   dotwhisker = derive2 { name="dotwhisker"; version="0.3.0"; sha256="1sbj8blnqnsyvf7pq2cc9q7nqb66n0v2gi2rr09yjlppf7v1pcjf"; depends=[broom dplyr ggplot2 ggstance gridExtra gtable plyr stringr]; };
   doubcens = derive2 { name="doubcens"; version="1.1"; sha256="1hn65n67by3xqbcnaf5jja5pli0g6wpbbz2sfzd7i2nms7kiywhp"; depends=[]; };
@@ -5566,27 +5680,30 @@ in with self; {
   dparser = derive2 { name="dparser"; version="0.1.8"; sha256="1yx425s3iq03j043g41pyfp3cgmajb4qh50zirhd0qpplzwy8xj5"; depends=[digest]; };
   dpcR = derive2 { name="dpcR"; version="0.4"; sha256="02j7fhhfq7p2wfcnr7rdy65v6dcvdym3nfyps7717p7b429chchc"; depends=[binom chipPCR dgof e1071 evd multcomp pracma qpcR rateratio_test readxl shiny signal spatstat]; };
   dpglasso = derive2 { name="dpglasso"; version="1.0"; sha256="1mx28xbm2z2bxyp33wv2v6vgn1yfsdsa0bzjjdxasgd6lvr51myf"; depends=[]; };
-  dplR = derive2 { name="dplR"; version="1.6.6"; sha256="04b0j9l2gkkycjjn16zbhv0kczhrij0bsnrdyh9qd6z53pvd3ryc"; depends=[digest lattice Matrix matrixStats plyr png R_utils stringi stringr XML]; };
+  dplR = derive2 { name="dplR"; version="1.6.7"; sha256="0i4s4anklia0bnygqrkk35gnc972qfnvzr3sfzwz7jxghigw7k8l"; depends=[animation digest lattice Matrix matrixStats plyr png R_utils stringi stringr XML]; };
   dplRCon = derive2 { name="dplRCon"; version="1.0"; sha256="10xnawgnhxp5y949fxs1vvadc1qz2ldy0s9w9w7kf6iqh59d35sw"; depends=[]; };
   dplyr = derive2 { name="dplyr"; version="0.7.4"; sha256="1hm8ml7yaraag1ak6kvz2mxx6if568c759ix8a1n9d7va03wj7vv"; depends=[assertthat BH bindrcpp glue magrittr pkgconfig plogr R6 Rcpp rlang tibble]; };
+  dplyr_teradata = derive2 { name="dplyr.teradata"; version="0.1.1"; sha256="1fbvfd02zp408knv1ryjs4nwg8zi5vbbpgn7gxqiyzwbfqizkkqy"; depends=[bit64 DBI dbplyr dplyr odbc]; };
   dplyrAssist = derive2 { name="dplyrAssist"; version="0.1.0"; sha256="1lqizh70b1apyr4578917gv6s0i7p84ak96a57kvwipmh36a4ywn"; depends=[DT magrittr miniUI plyr rstudioapi shiny shinyAce shinyWidgets stringr tidyr tidyverse]; };
   dpmixsim = derive2 { name="dpmixsim"; version="0.0-8"; sha256="0paa2hmpd6bqf0m7p9j7l2h3j18lm64ya6ya8zvp55wm8pf7xgqg"; depends=[cluster oro_nifti]; };
   dpmr = derive2 { name="dpmr"; version="0.1.9"; sha256="1cnjywkvjb4fhbf4shjmsrq47f1fg2x21hcm1q5512bm0wg9i6jd"; depends=[digest httr jsonlite magrittr rio]; };
   dprep = derive2 { name="dprep"; version="3.0.2"; sha256="0iw1pqpqlv436wpwh1w832aqvy91zvxmbk2jdw7aczrb29wys2bj"; depends=[class e1071 FNN MASS nnet rgl rpart StatMatch]; };
+  dprint = derive2 { name="dprint"; version="0.0.4"; sha256="13bq6yjlp5p5rcsz684rqcigp42xnz3p5phnqmrhzm874gfzm8rj"; depends=[]; };
   dr = derive2 { name="dr"; version="3.0.10"; sha256="0dmz4h7biwrn480i66f6jm3c6p4pjvfv24pw1aixvab2vcdkqlnf"; depends=[MASS]; };
   dr4pl = derive2 { name="dr4pl"; version="1.0.0"; sha256="1gcddnjmzqm16vzqvh8hxw2spvfa41jmapf7n87lv100j5f8ahl5"; depends=[devtools drc ggplot2 Matrix Rdpack tensor testthat]; };
   drLumi = derive2 { name="drLumi"; version="0.1.2"; sha256="09ps8rcqrm6a1y8yif2x82l0k4jywq60pkndh9nzfpbsw4ak2lby"; depends=[chron gdata ggplot2 Hmisc irr minpack_lm msm plyr reshape rootSolve stringr]; };
-  drake = derive2 { name="drake"; version="4.4.0"; sha256="0s4xw3h9irhlzv17w9zz613i5giw1swvbfvi4fvdj7pr70wsijgv"; depends=[codetools crayon digest eply evaluate future igraph knitr lubridate magrittr plyr R_utils rprojroot storr stringi stringr testthat visNetwork withr]; };
-  drat = derive2 { name="drat"; version="0.1.3"; sha256="14q2ahy51b8mlp7fb0nbwzy5hcnlg1z73wgi85sxx4pyq1ycp4zn"; depends=[]; };
+  drake = derive2 { name="drake"; version="5.0.0"; sha256="0hldxadlcl3m249rb68yikvn4gck98zj2x67jjxfgas27a1n4pjx"; depends=[codetools crayon digest evaluate formatR future future_apply igraph knitr lubridate magrittr plyr R_utils rprojroot storr stringi stringr testthat visNetwork withr]; };
+  drat = derive2 { name="drat"; version="0.1.4"; sha256="0vrpqf793vinx4v7jrbn910iplvpmrlwhdjqqzx8cl2k9hl43x08"; depends=[]; };
   drawExpression = derive2 { name="drawExpression"; version="1.0"; sha256="0c2daicqrjlqf7s788cknzvw9c6rm500lgmwfr7z03bq7bd2ah90"; depends=[]; };
   drc = derive2 { name="drc"; version="3.0-1"; sha256="0c8xn8ripzq270hy8d16fcnx02l02alddznd7fqwk3jyi6113h1y"; depends=[car gtools MASS multcomp plotrix scales]; };
   drfit = derive2 { name="drfit"; version="0.7.1"; sha256="1k2chmhdwd78a5d1pxi3iskzfb4h1fxp51ji72qs73m3i6s2mqpz"; depends=[drc MASS qcc reshape2 RODBC]; };
   drgee = derive2 { name="drgee"; version="1.1.6"; sha256="01404mqvkvndn5gybq8dgkfc1cy9wk94p7k7i64h47w3zbkcwsax"; depends=[data_table nleqslv Rcpp RcppArmadillo survival]; };
+  driftR = derive2 { name="driftR"; version="1.0.0"; sha256="0mlhv22xmgiq4a680rk9d39gk2p1b5lrkvvmqjzmlynfy9f8bkj0"; depends=[dplyr ggplot2 glue magrittr readr rlang stringr tibble]; };
   drm = derive2 { name="drm"; version="0.5-8"; sha256="1p6ixd7hnv41gfmvan3rv9xzz1279hmrnvfrl6pxwzs9zcnbb53a"; depends=[]; };
   drmdel = derive2 { name="drmdel"; version="1.3.1"; sha256="1bpm9jj9dxk2daxp1yb7pn9jd750p27qa84vdfxpacm5r0mggnys"; depends=[]; };
   dropR = derive2 { name="dropR"; version="0.1"; sha256="0sw5lqlfdn64dbykxdhk1pz18f83if871vkapa2nxgcfiy79b0vs"; depends=[plyr shiny]; };
   drsmooth = derive2 { name="drsmooth"; version="1.9.0"; sha256="1wgi961bvbsnq4bygxbpy4sy5fy34lrrkaaj0r2rxcahwa1sc38n"; depends=[boot car DTK lubridate mgcv multcomp pgirmess segmented]; };
-  drtmle = derive2 { name="drtmle"; version="1.0.0"; sha256="1fnzgy3sq5nys7qw8g5bhmzw92azripjg6pb93vxrfsbr4agmmrz"; depends=[foreach np plyr SuperLearner]; };
+  drtmle = derive2 { name="drtmle"; version="1.0.2"; sha256="02i75qj1l0zd518dmkv4qdbd6r8xqrxvsg6ahaxi6pwy00dvqnqm"; depends=[doFuture future future_batchtools np plyr SuperLearner]; };
   ds = derive2 { name="ds"; version="3.0"; sha256="10xp575l0wh85wg32k3as02kgqm9ax9nx9i5kd5bkimfwg4qv745"; depends=[]; };
   dsample = derive2 { name="dsample"; version="0.91.2.2"; sha256="18c0zxaqwgbn9kmkwlnicwd74ljy2sxj0b9ksif13pdlj3zn57h1"; depends=[MASS]; };
   dse = derive2 { name="dse"; version="2015.12-1"; sha256="1976h57zallhzq43nshg77bsykcvkfwnasha1w59c44fjpl1gs9w"; depends=[setRNG tfplot tframe]; };
@@ -5600,41 +5717,43 @@ in with self; {
   dtangle = derive2 { name="dtangle"; version="0.1.0"; sha256="1i9wjg31ldhiyl01znzcalhwsi6yfqzxi1xdpivkzxhf25bp932r"; depends=[]; };
   dti = derive2 { name="dti"; version="1.2-6.1"; sha256="1p88k7qkmas49niq618jhddc0h4mwh5gd267v6rlzzpmv5f98fkb"; depends=[adimpro awsMethods gsl oro_dicom oro_nifti quadprog rgl]; };
   dtplyr = derive2 { name="dtplyr"; version="0.0.2"; sha256="1q75xnk52zfxnphj095dppcqdmk9v1n32069rffpnvr39nnik565"; depends=[data_table dplyr lazyeval]; };
-  dtree = derive2 { name="dtree"; version="0.2.3"; sha256="03kma2hb373gd87yr10yn76i20r0yncxjfamgpnijr2yf6b5fq20"; depends=[caret evtree party partykit rpart]; };
+  dtree = derive2 { name="dtree"; version="0.4.2"; sha256="1cpv0pyf515610djxzfw1c83p3alk5a93clg4x9gk7a7qy4cyhr1"; depends=[caret evtree party partykit rpart]; };
   dtt = derive2 { name="dtt"; version="0.1-2"; sha256="0n8gj5iylfagdbaqirpykb01a9difsy4zl6qq55f0ghvazxqdvmn"; depends=[]; };
   dtw = derive2 { name="dtw"; version="1.18-1"; sha256="1b91vahba09cqlb8b1ry4dlv4rbldb4s2p6w52gmyw31vxdv5nnr"; depends=[proxy]; };
   dtwSat = derive2 { name="dtwSat"; version="0.2.3"; sha256="10b0hs9kn5ljfv28iz62h966zb1pxsfrr6fx45d4427gr6fg8ncz"; depends=[caret dtw ggplot2 lubridate mgcv plyr proxy raster RColorBrewer reshape2 rgdal scales sp xtable zoo]; };
-  dtwclust = derive2 { name="dtwclust"; version="4.1.1"; sha256="1awpqch4jdm70x6hjhzp3g98yikg12sv82zfyd2jwjh4nssiawh1"; depends=[BH bigmemory clue dtw flexclust foreach ggplot2 Matrix plyr proxy Rcpp RcppArmadillo reshape2 rngtools RSpectra]; };
+  dtwclust = derive2 { name="dtwclust"; version="5.2.0"; sha256="0wabb6mhc0h73lpxjg29hdb9kpy7gdp6mddhdwcgc560v5skyqd8"; depends=[bigmemory clue cluster dplyr dtw flexclust foreach ggplot2 ggrepel Matrix nloptr proxy Rcpp RcppArmadillo RcppParallel reshape2 rngtools RSpectra]; };
   dualScale = derive2 { name="dualScale"; version="0.9.1"; sha256="11hqxprai0s5id6wk4n2q174r1sqx9fzw3fscvqd2cgw8cjn1iwl"; depends=[ff lattice Matrix matrixcalc vcd]; };
+  dub = derive2 { name="dub"; version="0.1.0"; sha256="0sdk8sppjcfx2bsngpngm2446warsnipzzw4yz5z4jpickp52ay0"; depends=[]; };
   duckduckr = derive2 { name="duckduckr"; version="1.0.0"; sha256="1wki8xvqp5hr27iafd9jbryl9faywfkdkpn0pa0afywbic39k2cm"; depends=[crul jsonlite]; };
   dummies = derive2 { name="dummies"; version="1.5.6"; sha256="01f84crqx17xd6xy55qxlvsj3knm8lhw7jl26p2rh2w3y0nvqlbm"; depends=[]; };
   dummy = derive2 { name="dummy"; version="0.1.3"; sha256="081a5h33gw6ym4isy91h6mcf247c2vsdygv9ll07a3mgjcjnk79p"; depends=[]; };
   dunn_test = derive2 { name="dunn.test"; version="1.3.5"; sha256="0lqwvyl3pyygfc73nf81gzw3zl3w43r7ki0yw2dgrzhkpb2iji4a"; depends=[]; };
   dupiR = derive2 { name="dupiR"; version="1.2"; sha256="0p649yw7iz6hnp7rqa2gk3dqkjbqx1f6fzpf1xh9088nbf3bhhz3"; depends=[plotrix]; };
   dvfBm = derive2 { name="dvfBm"; version="1.0"; sha256="0gx11dxkbnh759ysd1lxdarlddgr3l5gwd5b0klwvwsgck6jv529"; depends=[wmtsa]; };
-  dvmisc = derive2 { name="dvmisc"; version="1.1.1"; sha256="1lz8v1946c4nlnpcpx9lk90fjaqr1myxni700k7b30ljyns4nqn3"; depends=[MASS microbenchmark rbenchmark Rcpp]; };
+  dvmisc = derive2 { name="dvmisc"; version="1.1.2"; sha256="1dy0yykskwhkql19bhzmbwsgv028afc8jh9yqwbczj6f3vpv31zh"; depends=[MASS rbenchmark Rcpp]; };
   dvn = derive2 { name="dvn"; version="0.3.5"; sha256="04di2gpdacivvd9bi96w6145k280s8blavdhi1w3rw4c7sc3hag2"; depends=[RCurl XML]; };
-  dwapi = derive2 { name="dwapi"; version="0.1.1"; sha256="1pr1ja7663skyr7mzvn1ap33l5xsng91xiylg02c5wdcg8clv66a"; depends=[httr readr rjson xml2]; };
+  dwapi = derive2 { name="dwapi"; version="0.1.2"; sha256="09crawhd0i94h6c091w1h72nay931xadhmiiy84x4pgvvj2nq6qq"; depends=[httr readr rjson xml2]; };
   dyads = derive2 { name="dyads"; version="1.1"; sha256="0jlyg4bz3zp4g5ig0swwi72bxaj85wll05h6vishnvmnprpdc96n"; depends=[MASS mvnfast]; };
   dygraphs = derive2 { name="dygraphs"; version="1.1.1.4"; sha256="0vwg9q7xrwxkm92d55ik9gdky42bj3jlh6fi4jzwyl5nfdswklb9"; depends=[htmltools htmlwidgets magrittr xts zoo]; };
   dyn = derive2 { name="dyn"; version="0.2-9.3"; sha256="00h75kqfpr77jhppnpxvykbdcmsmsb2vl2527xzq10wkvm7gfpvv"; depends=[zoo]; };
   dynBiplotGUI = derive2 { name="dynBiplotGUI"; version="1.1.5"; sha256="0fvyn33mzjcc3sis05phc6412y25m406il2wzdfw8caa8dafj0yw"; depends=[tcltk2 tkrplot]; };
-  dynCorr = derive2 { name="dynCorr"; version="1.0.0"; sha256="0qx8kwa6jnqb2qxwvhh509sylwdrv684dsjd9w13lafyjxgvdnlj"; depends=[lpridge]; };
+  dynCorr = derive2 { name="dynCorr"; version="1.1.0"; sha256="0l5k764j1zhsqpgp0ndihah63hsk3zv9hviixfmh4h3i0sr0q52p"; depends=[lpridge]; };
   dynOmics = derive2 { name="dynOmics"; version="1.0"; sha256="10aw362hhwqdnjf7xxzy25fdxq2zznzvg6xwvl25a9ppj76nm1rh"; depends=[ggplot2 gplots snow]; };
   dynRB = derive2 { name="dynRB"; version="0.10"; sha256="0nd1z96rrd7dv1212ibf268dws64n7d9dqzgrqmzs4qz7gwwhngl"; depends=[caTools corrplot]; };
   dynaTree = derive2 { name="dynaTree"; version="1.2-10"; sha256="1ng672mlv98xnsbd4xq70hxc8j158la4n63y46rw74granaz29ya"; depends=[]; };
   dynamicGraph = derive2 { name="dynamicGraph"; version="0.2.2.6"; sha256="1xnsp8mr3is4yyn0pyrvqhl893gdx2y1zv8d2d55aah2xbfk0fjj"; depends=[ggm]; };
   dynamicTreeCut = derive2 { name="dynamicTreeCut"; version="1.63-1"; sha256="1fadbql7g5r2vvlkr89nlrjxwp4yx4xrdqmv077qvmnx9vv0f4w3"; depends=[]; };
   dynamichazard = derive2 { name="dynamichazard"; version="0.5.1"; sha256="11lx88g0rizwxa4rfmaz9b2g8p7nnzgiqz5b0gqsc4dvz92i74fg"; depends=[boot data_table Rcpp RcppArmadillo stringr survival]; };
-  dynatopmodel = derive2 { name="dynatopmodel"; version="1.1"; sha256="100g131jmgb3by9j3v2n7f7jh9623vd7xf5frjkwrxvwzf0q1i3k"; depends=[deSolve lubridate maptools raster rgdal rgeos sp topmodel xts zoo]; };
+  dynatopmodel = derive2 { name="dynatopmodel"; version="1.2.1"; sha256="0lpfhj69bvagqzzg2kjqvn9xx8f93ii34flrrns20z3bxla6gds9"; depends=[deSolve lubridate maptools raster rgdal rgeos sp topmodel xts zoo]; };
+  dyncomp = derive2 { name="dyncomp"; version="0.0.1-5"; sha256="1626z5523s4igw55fw97lplfgg9mzf4np8imrarkligslvc5q8ip"; depends=[zoo]; };
   dynetNLAResistance = derive2 { name="dynetNLAResistance"; version="0.1.0"; sha256="018y3m648ni31rlisjfnrx1d10mm48wpxanlnnxxpnqxjcywg2x8"; depends=[doParallel foreach igraph]; };
   dynfrail = derive2 { name="dynfrail"; version="0.5.2"; sha256="1q7ml24j0ycy2bwpa14vl96315ni7x9rfp0qmf36w00mylgc3ry6"; depends=[dplyr magrittr Rcpp RcppArmadillo survival tibble tidyr]; };
   dynia = derive2 { name="dynia"; version="0.2"; sha256="1swip4kqjln3wsa9xl0g92zklqafarva923nw7s44g4pjdy73d5l"; depends=[]; };
   dynlm = derive2 { name="dynlm"; version="0.3-5"; sha256="1sjhhlvvcgmayb9dfwacv1g75c4lhbpzyczj6h7gkd19bcfbdhqp"; depends=[car lmtest zoo]; };
   dynpanel = derive2 { name="dynpanel"; version="0.1.0"; sha256="073kfl5g4d7v8wd2qnpixqrxbac3cqj35z03ax2zlb8h2afa7j62"; depends=[gtools]; };
   dynpred = derive2 { name="dynpred"; version="0.1.2"; sha256="111ykasaiznn3431msj4flfhmjvzq7dd1mnzn1wklc5ndix1pvf9"; depends=[survival]; };
-  dynr = derive2 { name="dynr"; version="0.1.11-8"; sha256="1rnpzwzcdqvlh6h6npz7akw4dmw1r0958mk665z5cwssq4fha2dm"; depends=[ggplot2 latex2exp magrittr MASS Matrix mice numDeriv plyr Rdpack reshape2 xtable]; };
-  dynsbm = derive2 { name="dynsbm"; version="0.4"; sha256="036m5gcwfcdjj5xkrbvnnx1a6i31n9j3q2mcijc7qimbld31pfj6"; depends=[RColorBrewer Rcpp riverplot]; };
+  dynr = derive2 { name="dynr"; version="0.1.12-5"; sha256="1l9waqwg5mkqy8ipryickrkf141mjpzdvsc4qbw8bq4rkrgykklc"; depends=[ggplot2 latex2exp magrittr MASS Matrix mice numDeriv plyr Rdpack reshape2 xtable]; };
+  dynsbm = derive2 { name="dynsbm"; version="0.5"; sha256="01vi4qzgp25l4wg2ij9pqrn775x4yj9gck0l397nwjg96pa7x2lz"; depends=[RColorBrewer Rcpp riverplot]; };
   dynsim = derive2 { name="dynsim"; version="1.2.1"; sha256="0nkxn9v4f353fhcn1vsdrh29mrms10zid63b84flg3c6hvc0x4qr"; depends=[ggplot2 gridExtra MASS]; };
   dynsurv = derive2 { name="dynsurv"; version="0.3-6"; sha256="12bfv6bykgsyxryydhjs89yvk7akam5gy89mzn1hv4ilrpc5mlmw"; depends=[BH ggplot2 nleqslv plyr reshape survival]; };
   e1071 = derive2 { name="e1071"; version="1.6-8"; sha256="08n6i26nfckjpxjkzi8phhanc3ahsrirkv5rz38y2jcv7ds031pn"; depends=[class]; };
@@ -5643,22 +5762,24 @@ in with self; {
   eHOF = derive2 { name="eHOF"; version="1.8"; sha256="0g0sb98mlgvhs27s0a1x0ysj3r4p3r7i382fqzfv29kn1ayw0r5c"; depends=[lattice mgcv]; };
   eLNNpaired = derive2 { name="eLNNpaired"; version="0.2.3"; sha256="08nck2p5npyw264kgcqmgx5rx7c3h9v892f90xlcd1dnb7dqlan3"; depends=[Biobase globaltest GSEAlm iCheck samr]; };
   eMLEloglin = derive2 { name="eMLEloglin"; version="1.0.1"; sha256="087zw48lykls2jcsmpqd5jkrlpr0j423snp00liszjhdpdh59saq"; depends=[lpSolveAPI]; };
+  ePCR = derive2 { name="ePCR"; version="0.9.9-4"; sha256="0lnkb4zffn62vbx8hh953z9zh0plj8l15cc1k3x936zblzgd226r"; depends=[Bolstad2 c060 glmnet hamlet impute MASS Matrix pracma ROCR survival timeROC]; };
   eRm = derive2 { name="eRm"; version="0.15-7"; sha256="0x8cqcwgn8znd9w9vkxcacf097rziyb511wzcfmhhadidiilk0x3"; depends=[lattice MASS Matrix]; };
   eVenn = derive2 { name="eVenn"; version="2.4"; sha256="1qs5qsrc89kb6w6xqc8jdxkih6h48zprvavffdqhxq4ab4i1nvbf"; depends=[]; };
   eaf = derive2 { name="eaf"; version="1.07"; sha256="0310lrqfm1l0lifak7wa6xn21bzzn27kbrrx0bidj4hibwv7sa4l"; depends=[modeltools]; };
+  earlyR = derive2 { name="earlyR"; version="0.0.1"; sha256="14davqhh3n5dfsddnfd79ni56bssrpwhvkqkdb77a8x9fn8w32pv"; depends=[distcrete EpiEstim epitrix]; };
   earlywarnings = derive2 { name="earlywarnings"; version="1.0.59"; sha256="06j5g5lrzl4p5pb1pp79h00iqpbwralzhpzxmaiymv7j8kz87nr0"; depends=[fields ggplot2 Kendall KernSmooth lmtest moments nortest quadprog som spam tgp tseries]; };
-  earth = derive2 { name="earth"; version="4.5.1"; sha256="1fkjrdlq0a8w9dvvp0akxpyg0sxrcd08qzflpxjbwd73pm1l31m5"; depends=[plotmo TeachingDemos]; };
+  earth = derive2 { name="earth"; version="4.6.0"; sha256="1inpspp2giq24ypm60k297s6lfm4kxfwqrx2ycxyyl4syl1sqw4b"; depends=[plotmo TeachingDemos]; };
   earthtones = derive2 { name="earthtones"; version="0.1.0"; sha256="1phl50bgd40i36fdkfs9xkqm703vgwxlnpyik6lk8ssip0m4rn9j"; depends=[ggmap]; };
   easyAHP = derive2 { name="easyAHP"; version="0.1.1"; sha256="161mn90j9ph1p9277mj61hch8ndcv7k9izs32q93y5wp474gzynd"; depends=[]; };
   easyDes = derive2 { name="easyDes"; version="3.0"; sha256="1z4ynd1ck2vxsshygjgnhyzg8i41kpnwsfix96nmgwm3861n0phb"; depends=[multcomp PMCMR]; };
   easyNCDF = derive2 { name="easyNCDF"; version="0.0.4"; sha256="1hd7b6pdm5j41a4v0jxhbqdy2bz5gj86fsfwj0l7gg7h32d6hkhq"; depends=[abind ncdf4]; };
   easyPubMed = derive2 { name="easyPubMed"; version="2.3"; sha256="148ga6flgv74sfzz5kvvnqhfdkx6zhpl6ydzcd32lz3cq24ckli9"; depends=[XML]; };
-  easySdcTable = derive2 { name="easySdcTable"; version="0.3.0"; sha256="1dyj66vd1g06s2fs6xqrf7b4sr2p55azhzdjhazvkm9h8j55ai02"; depends=[sdcTable shiny SSBtools]; };
-  easyVerification = derive2 { name="easyVerification"; version="0.4.3"; sha256="02f7n5iwivzbsdaj2pca0vs50zins6hapn4bn4nxg624qnrldnfy"; depends=[pbapply Rcpp SpecsVerification]; };
+  easySVG = derive2 { name="easySVG"; version="0.1.0"; sha256="03gl5gl0yqgpygd4kna79wrhflbnq3zrz3iq2i8hk9xqd83mszh3"; depends=[]; };
+  easySdcTable = derive2 { name="easySdcTable"; version="0.3.1"; sha256="0z0fq73m7vjc8wry633lvz58r2c6a6zz6w867hij1627c74mjhs4"; depends=[sdcTable shiny SSBtools]; };
+  easyVerification = derive2 { name="easyVerification"; version="0.4.4"; sha256="08mih1arx01vj7cs1jsln644pcvslpyw1rgr6jmv2czr6xd8qb7d"; depends=[pbapply Rcpp SpecsVerification]; };
   easyanova = derive2 { name="easyanova"; version="5.0"; sha256="13m4ddvl3nbh610y00nnihmag62g39v4ds7rx6lmifx4zq86mylp"; depends=[car nlme]; };
-  easycsv = derive2 { name="easycsv"; version="1.0.5"; sha256="1fk7fj6y69hjgwgrfpz69jhbhz6yj5gjlrmji74h2k5qfk3fssky"; depends=[data_table]; };
+  easycsv = derive2 { name="easycsv"; version="1.0.7"; sha256="03bhcylvs9q3bv4svj4mznqzv5h0m773vbikpymawk94r3gg0qaz"; depends=[data_table]; };
   easyformatr = derive2 { name="easyformatr"; version="0.1.2"; sha256="0mrpd21hyafn82apclxmhs2jbd87sdw0g6lwc3h6gl5cbm213nxb"; depends=[dplyr knitr lazyeval magrittr stringi tibble tidyr]; };
-  easyml = derive2 { name="easyml"; version="0.1.0"; sha256="1ngfai9i2v9hn09c7z48b43113kz2jkq7qvz22z25qdrav42hs1c"; depends=[caret corrplot darch dummies e1071 futile_logger ggplot2 glinternet glmnet nnet pbapply pbmcapply pROC randomForest scales scorer]; };
   easynls = derive2 { name="easynls"; version="5.0"; sha256="1ma2q4y5dxk6q99v880vqfsgy1fha96j7pi8ch699l0pi6bx0d6c"; depends=[]; };
   easypackages = derive2 { name="easypackages"; version="0.1.0"; sha256="00paxdwz4bw3imqhcsw6hj1h0gmnpishlxcj79n826vhdy23jc4y"; depends=[assertthat devtools]; };
   easypower = derive2 { name="easypower"; version="1.0.1"; sha256="1vf0zv55yf96wjxja6ifdjvgc9nw0jl0hnc1ygyjd8pmwbgdz9bl"; depends=[pwr]; };
@@ -5673,11 +5794,11 @@ in with self; {
   ecb = derive2 { name="ecb"; version="0.2"; sha256="17hj4d48j6rran64ajzlgkgz17mab51fa3lz8rm3mw0qhahkjlmc"; depends=[curl httr rsdmx xml2]; };
   ecd = derive2 { name="ecd"; version="0.9.1"; sha256="0d8mf5q6n7k5qj6kxvrb3habl0qmn2rxv814kydkrz2bg0scvm1q"; depends=[digest ggplot2 gridExtra gsl moments optimx polynom RcppFaddeeva Rmpfr RSQLite stabledist xtable xts yaml zoo]; };
   ecdfHT = derive2 { name="ecdfHT"; version="0.1.1"; sha256="1n3n9n86pj8c54l3xvp7knvi0ajbnjmz9pi79p7wfq92a90fqx48"; depends=[rgl]; };
-  ecespa = derive2 { name="ecespa"; version="1.1-9"; sha256="10s0p07r285kbahx9kwhhdpfi8qrrvgv10vxj08qs9l8blvpn99r"; depends=[spatstat splancs]; };
+  ecespa = derive2 { name="ecespa"; version="1.1-10"; sha256="1n6wvz463w0ainn9a52arjhs5q9pwciknb5328pr6y287fwa3nnn"; depends=[spatstat]; };
   echogram = derive2 { name="echogram"; version="0.1.1"; sha256="0f93s9f1ghin8129vb3bvsp7jmy2hfrx97p86hci8b2y4f7b83qh"; depends=[geosphere readHAC]; };
   ecipex = derive2 { name="ecipex"; version="1.0"; sha256="0pzmrpnis52hvy80p3k60mg9xldq6fx8g9n3nnqi3z56wxmqpdv7"; depends=[CHNOSZ]; };
   eclust = derive2 { name="eclust"; version="0.1.0"; sha256="01x327w02m357lngmgv3drni2s67sass25xk9vni1z434n8i4428"; depends=[caret data_table dynamicTreeCut magrittr pacman pander stringr WGCNA]; };
-  ecm = derive2 { name="ecm"; version="2.0.0"; sha256="1xfcpsnimik8a2rzsywgiw4dj3r66mfcq7l79096d3zifg2vjgxc"; depends=[car]; };
+  ecm = derive2 { name="ecm"; version="3.0.0"; sha256="19szjkfy2iivdw5zbag9mbk3pm7a8qb6hvg1y4jdrpf519xb4935"; depends=[car]; };
   eco = derive2 { name="eco"; version="4.0-1"; sha256="08fblbr9qp2v0cp69hy68c18xjqvx0nsnx42n2vd1gc6r7apapj6"; depends=[MASS]; };
   ecodist = derive2 { name="ecodist"; version="2.0.1"; sha256="04piv52b4b9rgv1gy6s3b1lzapc0rqiwp1yi7f8yzgjd9329kc5g"; depends=[]; };
   ecoengine = derive2 { name="ecoengine"; version="1.11.0"; sha256="1d5x6hvqrqjj0wg07m4dbgb9ljdq73ibavzy2q5magnfn50a7rzm"; depends=[assertthat data_table dplyr httr jsonlite lubridate magrittr plyr whisker]; };
@@ -5687,30 +5808,30 @@ in with self; {
   ecoreg = derive2 { name="ecoreg"; version="0.2.2"; sha256="1yzyqvhshgc7ip251y7hsvip4xwf8i92bvvz84mn0mzv5b4mq3im"; depends=[]; };
   ecoseries = derive2 { name="ecoseries"; version="0.1.5"; sha256="1q35hp5hl6z28hns5rnp3mjn6hqp5qh714pagw7fw4d4a6wnvacy"; depends=[magrittr RCurl readr rjson rvest tibble xml2 zoo]; };
   ecosim = derive2 { name="ecosim"; version="1.3"; sha256="00arz8j2az1nn4p96pshw0p9xxq2qfgkyrf4ahvl1hp1h3k68jfn"; depends=[deSolve stoichcalc]; };
-  ecospace = derive2 { name="ecospace"; version="1.2.1"; sha256="148q1pqmgsp0mjl8wpkpshkcrkm22g5qlkad1dhwyw6l7vsbpwxv"; depends=[FD]; };
+  ecospace = derive2 { name="ecospace"; version="1.2.3"; sha256="1zfd1m4snpy17i751i2fgxdqxmz6xv5aa66c24wnvd8cq4i8qkm0"; depends=[FD]; };
   ecospat = derive2 { name="ecospat"; version="2.2.0"; sha256="0awzhzl90j72jxp7qk5q5vqmgyccbkw2rbw0jrhjvlwkr5q9gyvx"; depends=[ade4 adehabitatHR adehabitatMA ape biomod2 classInt dismo doParallel ecodist foreach gbm gtools iterators maptools MigClim PresenceAbsence randomForest raster rms sp spatstat vegan]; };
-  ecotox = derive2 { name="ecotox"; version="1.1.0"; sha256="0vgzhihxl03y7k491bvpngmjmgbilyvidka83yfrr2s3j7v97yg4"; depends=[ggplot2]; };
+  ecotox = derive2 { name="ecotox"; version="1.3.0"; sha256="05k3hdz25kw28222bnlk814b2rlwq2f6b5kdqxqls9wdfvdknij3"; depends=[ggplot2]; };
   ecotoxicology = derive2 { name="ecotoxicology"; version="1.0.1"; sha256="084xkr59d7x9zxmsnsyym2x8jshz6ag6rvnmhd1i6fzar8ypwccb"; depends=[]; };
   ecoval = derive2 { name="ecoval"; version="1.1"; sha256="0ihig6nq3lrz6lzix92lrlzywnqkzsp5lrbccn5slhxdj5llird2"; depends=[rivernet utility]; };
-  ecp = derive2 { name="ecp"; version="3.0.0"; sha256="0v07ak7fbiph058rlbhmgx0f230mnpi39ib8vx9bdzhx5g5lrp0j"; depends=[Rcpp]; };
+  ecp = derive2 { name="ecp"; version="3.1.0"; sha256="0siq5acpy4wmqzm6zvpqj1m8a05hgk5jhb1clv06y40kqk5kjrap"; depends=[Rcpp]; };
   ecr = derive2 { name="ecr"; version="2.1.0"; sha256="0vvkdxlcqaim9mkgwgdxrx1xhw3lshi1nxfw3kqllq14p3l6xss4"; depends=[BBmisc checkmate ggplot2 parallelMap ParamHelpers reshape2 smoof]; };
+  eda4treeR = derive2 { name="eda4treeR"; version="0.2.0"; sha256="0fh6nfgvbkvjm1f0b292ggi0mr8ylq5pg2wp8cph46j8rhbgbdxz"; depends=[dae dplyr emmeans ggplot2 lme4 magrittr pbkrtest tidyverse]; };
   edarf = derive2 { name="edarf"; version="1.1.1"; sha256="0f27hs7vn4v2jis3d66s48hr0ki8m8ndspcw1cwns5vjwb77iqwm"; depends=[data_table ggplot2 mmpf]; };
   edcc = derive2 { name="edcc"; version="1.0-0"; sha256="036fi6mnn9480hkb378xb5jilkfvdydjmkyw4mcc9s1lz195f62w"; depends=[spc]; };
   edci = derive2 { name="edci"; version="1.1-2"; sha256="10rqkimvmyb7hxp4wkpj8bq07q3yaimm058d4mmr09fw25lqyz1q"; depends=[]; };
   edeR = derive2 { name="edeR"; version="1.0.0"; sha256="1dg0aqm5c4zyf015hz1hhn3m4lfvybc4gc1s7sp8jcsk46rxz0cc"; depends=[rJava rjson rJython]; };
-  edeaR = derive2 { name="edeaR"; version="0.7.1"; sha256="1551hwl0gb55kkfpl990yhwa6l9hbx7a6bcggv5nkfqc66cs9rcm"; depends=[bupaR data_table dplyr ggplot2 ggthemes glue lubridate miniUI purrr shiny shinyTime tibble tidyr XML xml2]; };
+  edeaR = derive2 { name="edeaR"; version="0.7.2"; sha256="0k043g2qrm58l7dvb2ylpg76wcznkr4p4vp2p3b4hhg1hzq8zccf"; depends=[bupaR data_table dplyr ggplot2 ggthemes glue lubridate miniUI purrr rlang shiny shinyTime stringr tibble tidyr]; };
   edesign = derive2 { name="edesign"; version="1.0-13"; sha256="0fc3arr8x9x9kshp6jq4m4izzc5hqyn5vl0ys6x0ph92fc6mybp3"; depends=[]; };
   edf = derive2 { name="edf"; version="1.0.0"; sha256="14ikm6j0ndxrk7c7lh5mbd2aci46d4j9a30mvcgnxy3kq6046a7b"; depends=[]; };
   edfReader = derive2 { name="edfReader"; version="1.1.2"; sha256="02cclg549z6samhkraaknsmqvk0yxxcf4s9qpbcxb2cl9fcj1cjr"; depends=[]; };
   edfun = derive2 { name="edfun"; version="0.2.0"; sha256="1wxx6bgy03z7c1d6556bbjl1cb49n2vn734fw2d5c1jk0zsh3fmz"; depends=[]; };
   edgar = derive2 { name="edgar"; version="1.0.9"; sha256="1jh0aaizirj4i4kc6gq9kkpa1xdqxbjhj7fys8ap1xxxx6nfpcnf"; depends=[ggplot2 R_utils RColorBrewer tm wordcloud XML]; };
-  edgarWebR = derive2 { name="edgarWebR"; version="0.2.1"; sha256="0ksfzj7yzb0jvdpmz6fcv4ii09l5sgjyfyba5692ym58c35m0l48"; depends=[httr xml2]; };
+  edgarWebR = derive2 { name="edgarWebR"; version="0.3.1"; sha256="0gakrgag7rm18njhrs7bq99mv7yn7yxis9yscz88va16dqdp17l8"; depends=[httr xml2]; };
   edgeCorr = derive2 { name="edgeCorr"; version="1.0"; sha256="19n67yc58ksin7xydrnfsyyw7fqawm5xli67cz4lv4wb62w6r6ld"; depends=[]; };
   edgeRun = derive2 { name="edgeRun"; version="1.0.9"; sha256="0d5nc8fwlm61dbi00dwszj1zqlij4gfds3w1mpcqnnfilr2g3di1"; depends=[data_table edgeR]; };
   edgebundleR = derive2 { name="edgebundleR"; version="0.1.4"; sha256="0pajr95qqppk2m4l7rfi46rll32z8a7lmq0vmb3p8n0aks5ajn1n"; depends=[htmlwidgets igraph rjson shiny]; };
   editData = derive2 { name="editData"; version="0.1.2"; sha256="1ibpd2rlm6i9izyizmdhzxv8agrw920hxbin5y79cmf78rdg1sxy"; depends=[DT miniUI rstudioapi shiny tibble]; };
   editrules = derive2 { name="editrules"; version="2.9.0"; sha256="14mfa8flkym2rx9n7bq9icc9fsrk3szib3amx5l0008rxll9qnxm"; depends=[igraph lpSolveAPI]; };
-  edmcr = derive2 { name="edmcr"; version="0.1"; sha256="1x0l963ccamfw6m9nsbqcfm45wxmq3jpfxzxmc4gxvpz8c7yf4jh"; depends=[igraph lbfgs MASS Matrix nloptr sdpt3r truncnorm vegan]; };
   edpclient = derive2 { name="edpclient"; version="0.2.0"; sha256="090yp94j3mm7g6lyc9vs8l1zhimnh9cizf55gw3g7ffqma2pl1rs"; depends=[httr ini jsonlite plyr]; };
   edrGraphicalTools = derive2 { name="edrGraphicalTools"; version="2.2"; sha256="105jv2sz10xbl881lkhgmxzgmb8629mqsminhd197khrkf9nv40i"; depends=[lasso2 MASS mvtnorm rgl]; };
   edstan = derive2 { name="edstan"; version="1.0.6"; sha256="1gm1rxwywigyfdlcm2yj1m9qjb4s6w7chr1ck7b32x1pdxdl3ns5"; depends=[ggplot2 rstan]; };
@@ -5721,9 +5842,10 @@ in with self; {
   eegkitdata = derive2 { name="eegkitdata"; version="1.0"; sha256="1krsadhamv1m8im8sa1yfl7injvrc4vv3p88ps1mpn8hibk5g51m"; depends=[]; };
   eel = derive2 { name="eel"; version="1.1"; sha256="0cv6dhw57yy140g73z94g9x1s42fpyfliv9cm2z1alm7xwap1l0x"; depends=[emplik rootSolve]; };
   eemR = derive2 { name="eemR"; version="0.1.5"; sha256="13c5k2si8aq2461iz9413hlqzgkb25zrdfvizzk8s2nn60npyaw9"; depends=[dplyr pracma R_matlab readr rlist stringr viridis]; };
-  eeptools = derive2 { name="eeptools"; version="1.1.0"; sha256="161gxaqkab9bl915xspqrnm9r4r7ydki482s4axsb0wsqpf2jr13"; depends=[arm data_table ggplot2 maptools memisc vcd]; };
+  eeptools = derive2 { name="eeptools"; version="1.1.1"; sha256="15b7rdjcl00jdb59llmgmwbxk31shayyv5skfbljwwm7vkwa22j7"; depends=[arm data_table ggplot2 maptools memisc vcd]; };
   eesim = derive2 { name="eesim"; version="0.1.0"; sha256="0ljj1jp9cl0im8k7sfjd28ggj4q9a14df3554kwxkssr1vsn1wbc"; depends=[dplyr lubridate purrr viridis]; };
   effectFusion = derive2 { name="effectFusion"; version="1.0"; sha256="1nx61n4lgnj6wh4arqm62p9xwxqvz4g7bs4b5k3ybkhmh6ns9v5l"; depends=[bayesm cluster ggplot2 MASS Matrix]; };
+  effectR = derive2 { name="effectR"; version="1.0.0"; sha256="08r1jifrqa9fxm5jp6jsvazdpql53kpm6mj0sg70hvd8q0cilryb"; depends=[ggplot2 reshape2 seqinr shiny viridis]; };
   effects = derive2 { name="effects"; version="4.0-0"; sha256="0h3247xcccanp0cp18r5k4l87i9862yjr5jc8sxcsfvjzn13xgf6"; depends=[carData colorspace lattice lme4 nnet survey]; };
   efflog = derive2 { name="efflog"; version="1.0"; sha256="1sfmq7xrr6psa6hwi05m44prjcpixnrl7la03k33n0bksj8r1w6b"; depends=[]; };
   effsize = derive2 { name="effsize"; version="0.7.1"; sha256="0l0ja7qcknn8r5hf7nrjk5cy0ajw0z60ggbyj8qvjzf8qah4mlss"; depends=[]; };
@@ -5733,7 +5855,7 @@ in with self; {
   egg = derive2 { name="egg"; version="0.2.0"; sha256="03k6xnbpakzgwlirxcvhrb10qh1pqvj9mv8rhr4snhnf753rb75j"; depends=[ggplot2 gridExtra gtable]; };
   eggCounts = derive2 { name="eggCounts"; version="1.4"; sha256="04rhyfckkg3q6n6izbmhh1m6ywywvrr719isnx8qghlx774qab86"; depends=[BH boot coda lattice numbers Rcpp RcppEigen rstan StanHeaders testthat]; };
   egonet = derive2 { name="egonet"; version="1.2"; sha256="1f0fbqyk2ilmhirxvf1iwgfappi5r7807ag77r89lbaf5jq8akl0"; depends=[sna]; };
-  eha = derive2 { name="eha"; version="2.5.0"; sha256="0kdlpmafpxph490aiijrrmypzs6a9vhfgczgvf2ir7i0shlaky2a"; depends=[survival]; };
+  eha = derive2 { name="eha"; version="2.5.1"; sha256="0www19cc80xg2hi1ibajqnp931gda9pk95cnx976lq1kpxzb2pyl"; depends=[survival]; };
   ei = derive2 { name="ei"; version="1.3-3"; sha256="0i8pvpal23zwsqldhmm3iis4vw9s08mlydpshaig2dsd9549gn11"; depends=[cubature eiPack ellipse foreach MASS mnormt msm mvtnorm plotrix sp tmvtnorm ucminf]; };
   eiCompare = derive2 { name="eiCompare"; version="2.1"; sha256="0kv4k1zk1gz3fapy2i2ydy0n38hy95i10r3hr3dx8mkkf3nsj46h"; depends=[cubature data_table ei eiPack ellipse foreach ggplot2 magrittr mnormt msm mvtnorm plotrix plyr R_utils stringr tidyr tmvtnorm ucminf]; };
   eiPack = derive2 { name="eiPack"; version="0.1-7"; sha256="1cxk31bj012ijm85sf6l4rjrwayw94j2d6aav8p9g1f0raha2s6y"; depends=[coda MASS msm]; };
@@ -5746,20 +5868,21 @@ in with self; {
   elastic = derive2 { name="elastic"; version="0.8.0"; sha256="17aqf0a3spwh8k7s3kgnccbgad3sr3w63if96piygjz0lxgc7kzs"; depends=[curl httr jsonlite]; };
   elasticIsing = derive2 { name="elasticIsing"; version="0.2"; sha256="1zjgvz7w5j06x2cd1fzjl85di95ah67m1lanw01kic2bvhfwfbn6"; depends=[cvTools glmnet magrittr qgraph reshape2]; };
   elasticnet = derive2 { name="elasticnet"; version="1.1"; sha256="1x8rwqb275lz86vi044m1fy8xanmvs7f7irr1vczps1w45nsmqr2"; depends=[lars]; };
-  elasticsearchr = derive2 { name="elasticsearchr"; version="0.2.0"; sha256="0hw2pwfh6k8q1646cprg3d84acwgw5bi7vmp7wrnxkxg7npz5pyz"; depends=[httr jsonlite]; };
+  elasticsearchr = derive2 { name="elasticsearchr"; version="0.2.1"; sha256="1x20w13hkpnf1kjvml99a9q1w162f6703ccqvcqy6z0vamcvylw8"; depends=[httr jsonlite]; };
   elec = derive2 { name="elec"; version="0.1.2"; sha256="0f7ahrjb52w8a8l5v00xla6z9afpz2zrckl9v04xalp34snhdwan"; depends=[]; };
   elec_strat = derive2 { name="elec.strat"; version="0.1.1"; sha256="09196k5c3jsikh98d33bn70izwcbx0wb5ki9fv1ij0dw9mnv4c3p"; depends=[elec]; };
+  elect = derive2 { name="elect"; version="1.1"; sha256="1lr4c08r3pc3qy7g9csppfp0m79z9b0wvk6lf5dyp1yaf9k6phk0"; depends=[msm nnet]; };
   electionsBR = derive2 { name="electionsBR"; version="0.3.0"; sha256="18aq1yz2l2g4cjbmk18n5vl8x8lkp90xwm82l0bg1z1smyv3agan"; depends=[data_table dplyr haven magrittr]; };
   electoral = derive2 { name="electoral"; version="0.1.0"; sha256="0y4kkxm8vmj4gsan6qyhg28b0b6hgl4fghslk21d8w5w6syln4kh"; depends=[dplyr ineq tibble]; };
-  elementR = derive2 { name="elementR"; version="1.3.3"; sha256="09g6xmxgkqy9nlg9myfyhjjjh2xpxmf1k65r4327087jhh18l3in"; depends=[abind climtrends colourpicker devtools EnvStats gdata gnumeric lmtest outliers R6 reader readODS readxl shiny shinydashboard shinyjs stringr tcltk2 zoo]; };
-  elevatr = derive2 { name="elevatr"; version="0.1.3"; sha256="1fs34gaak0sdxpvbgszrwd833nd03p19m6fawaard1waylxsgscg"; depends=[httr jsonlite prettyunits progress raster ratelimitr rgdal sp]; };
+  elementR = derive2 { name="elementR"; version="1.3.5"; sha256="1b9f601r0gdcyclr23rf33skbbvh7lnr4nlmgcwxixkfsg8mabs9"; depends=[abind colourpicker devtools EnvStats gdata gnumeric lmtest outliers R6 reader readODS readxl shiny shinydashboard shinyjs stringr tcltk2 zoo]; };
+  elevatr = derive2 { name="elevatr"; version="0.1.4"; sha256="0gxwlcfn271p8gf2iqwqbi61kcaahfdghsc0rwm3xxxysjb5a2b2"; depends=[httr jsonlite progress raster ratelimitr sp]; };
   elexr = derive2 { name="elexr"; version="1.0"; sha256="1xmrzlp55z6k3psdg4a3x3rsilvq3k37v9r7ydfn80ahvqjz0fqh"; depends=[]; };
   elhmc = derive2 { name="elhmc"; version="1.1.0"; sha256="0ngva7rnfj75fq93ycsv929m9ykijp48r7cvd6sfmi0sqsjinax5"; depends=[emplik MASS plyr]; };
   elliplot = derive2 { name="elliplot"; version="1.1.1"; sha256="1sl85kyjpxiw0gs3syhlhfrci03fl054py7m24xln5vk07665vbp"; depends=[]; };
-  ellipse = derive2 { name="ellipse"; version="0.3-8"; sha256="0ibz1qvf1qbb5sigyhpxb8hgip69z3wcimk3az1701rg2i64g3ah"; depends=[]; };
+  ellipse = derive2 { name="ellipse"; version="0.4.1"; sha256="0g82vc51m3c1k0hnpp2zla6amxxgk2mmkl8ssnsc49jv3599r6hs"; depends=[]; };
   elliptic = derive2 { name="elliptic"; version="1.3-7"; sha256="1bzd5x0yph76jh59ljl875grm52s8xpnmbgww1jjxx0hgkv7938g"; depends=[MASS]; };
   elmNN = derive2 { name="elmNN"; version="1.0"; sha256="129r6d3qa48gqvqxks53hdmyk3jjakddsj5fwj91kqq0hkm34kyd"; depends=[MASS]; };
-  elo = derive2 { name="elo"; version="1.0.0"; sha256="176d49hk2zfpnzp9kn2nsbwndqidfyw38piy8kbcdxl9bh5jwpp8"; depends=[pROC Rcpp]; };
+  elo = derive2 { name="elo"; version="1.0.1"; sha256="0dhlac5l68a3jps2hx0bc7qjj8hsr1ha137hcwxnrfdwnki6chlp"; depends=[pROC Rcpp]; };
   elrm = derive2 { name="elrm"; version="1.2.2"; sha256="0wz0l703v0iyp7nswdmh65n0cy3a7rfvyxd795a6nzk3nich8bfg"; depends=[coda]; };
   emIRT = derive2 { name="emIRT"; version="0.0.8"; sha256="17igda5phgfapjzg7dkid5jj49gmwgpadjr27z7s21365i7md9mz"; depends=[pscl Rcpp RcppArmadillo]; };
   embryogrowth = derive2 { name="embryogrowth"; version="7.1"; sha256="0gm5ww7vwc6kcv6lzrca4f9a6nkilb79d5b4kidfhwrcbfrkdb2k"; depends=[deSolve HelpersMG numDeriv optimx]; };
@@ -5770,7 +5893,7 @@ in with self; {
   emil = derive2 { name="emil"; version="2.2.8"; sha256="02xjf8ipqr136y3pa375lwpg6h63yvbphhghs9jjxfl2r4fdkvcn"; depends=[data_table dplyr ggplot2 lazyeval magrittr Rcpp tidyr]; };
   emma = derive2 { name="emma"; version="0.1-0"; sha256="0psd8lrbcqla8mkhp0wlassaaimgwlmqy5yv2wwcq59mc5k1v27f"; depends=[clusterSim earth]; };
   emme2 = derive2 { name="emme2"; version="0.9"; sha256="035s4h95ychqb14wib0dqbg4sjy9q01fsryr0ri25g1hsi5f8lpm"; depends=[reshape]; };
-  emmeans = derive2 { name="emmeans"; version="0.9.1"; sha256="10rfliy3chwc4j9bcrsm5rygs8bk8nfvwvh1hdliz6glkg5rpicw"; depends=[coda estimability ggplot2 multcomp mvtnorm nlme plyr xtable]; };
+  emmeans = derive2 { name="emmeans"; version="1.1"; sha256="191kxk3va7xaxf4gad3ndxck449nci45n3jxfbw68m0kwk0h97qi"; depends=[coda estimability ggplot2 multcomp mvtnorm nlme plyr xtable]; };
   emoa = derive2 { name="emoa"; version="0.5-0"; sha256="1wcnsnkdmpcn21dyql5dmj728n794bmfr6g9hgh9apzbhn4cri8p"; depends=[]; };
   emojifont = derive2 { name="emojifont"; version="0.5.1"; sha256="0i4id9631ah5vzkzh6zfxgk55b2ppnbgabp1w2ivy29i0nji9wk4"; depends=[ggplot2 proto showtext sysfonts]; };
   emon = derive2 { name="emon"; version="1.3.2"; sha256="19khjjpyxvzhzihqq15w02l5v5ryyvxlklz1ch2gkmqcpnvyga32"; depends=[MASS mgcv]; };
@@ -5781,32 +5904,32 @@ in with self; {
   ems = derive2 { name="ems"; version="1.0.0"; sha256="1x6zsrf15xn865v8awbnq1cpaqp5j2k1pmis5a8mjnw568xi0hhw"; depends=[]; };
   emuR = derive2 { name="emuR"; version="0.2.3"; sha256="04nxrg95qgwc5ss139bgjcsxkarwzkxy132dz0vk3sq7sddnagws"; depends=[base64enc data_table DBI dplyr httpuv jsonlite MASS RCurl RSQLite stringr uuid wrassp]; };
   emulator = derive2 { name="emulator"; version="1.2-15"; sha256="1rp7q7zs8b49jzdkbzm4s1g8554h41hcabf4d78k9jhhys2z28g2"; depends=[mvtnorm]; };
-  enRich = derive2 { name="enRich"; version="3.0"; sha256="1ni2hkw0pq0mjjqd11qqrc3lbzyif84ljh9zrn2yil1qk2882r1n"; depends=[]; };
   enaR = derive2 { name="enaR"; version="3.0.0"; sha256="0sy7k8l6b8p34bcf9bpjr1y6qkjkvn77y2w2ws7ivcr1fynrhm5p"; depends=[gdata limSolve MASS network sna stringr]; };
   enc = derive2 { name="enc"; version="0.1"; sha256="03l8zhamq243h9ghl6nwvvxigzbz4xzkbd5sqafx1rlg69ds67f0"; depends=[]; };
-  encode = derive2 { name="encode"; version="0.3"; sha256="0s2xva9yadk0s9x6kiwmh6bbq79aa1zx4gb5d1m7nbp2z8x4z77i"; depends=[]; };
+  encode = derive2 { name="encode"; version="0.3.3"; sha256="01jippva8gfbg3bq6g1sz8mpmglywg4mkb4k44bfspiv60bmv98f"; depends=[]; };
   endogMNP = derive2 { name="endogMNP"; version="0.2-1"; sha256="0maxcp321ngbxrg0i23nlwhj849v771xahh53367x928ss4f8v7i"; depends=[]; };
   endogenous = derive2 { name="endogenous"; version="1.0"; sha256="079fmfxl9gf080zq5m1ixmgry9dawg2y6ixbfyc5da5jxf3zk9h8"; depends=[mvtnorm]; };
   endorse = derive2 { name="endorse"; version="1.6.0"; sha256="1j75sb2di2c092dilbjj5qsvb52h3zmm7wxflf9kg7xw227wq3zw"; depends=[coda]; };
   endtoend = derive2 { name="endtoend"; version="1.0"; sha256="0x8f6h0mznmncqdwvsp2f0x524g5clgvk64qflf373lyn6h1v0ap"; depends=[]; };
   energy = derive2 { name="energy"; version="1.7-2"; sha256="19c7bgjnm4ggf7w5mk64c5shkma3sa9wc8x117iqv7pk1bvvyy3p"; depends=[boot Rcpp]; };
   energyr = derive2 { name="energyr"; version="0.1.1"; sha256="1mid5f8l6v55pjzfx304a303mkn9b5r3jzmjl2fi2pz4v2jsdw04"; depends=[RgoogleMaps]; };
+  enetLTS = derive2 { name="enetLTS"; version="0.1.0"; sha256="0lqnhrsg9fnkn8z5crdrajpgavk1knr9z4sbdffpa6q9n8s5pmhr"; depends=[cvTools ggplot2 glmnet reshape robustHD]; };
   english = derive2 { name="english"; version="1.1-2"; sha256="1wlqpl85rq49ndrfqlixayp4zzvpad0snln5qirr1i3y2q510dgx"; depends=[]; };
   engsoccerdata = derive2 { name="engsoccerdata"; version="0.1.5"; sha256="06fdgjgnk4lwshrkd0jad411x5nz9sxlri9fdhxrf2dr2hik4l8q"; depends=[dplyr magrittr tidyr]; };
-  enigma = derive2 { name="enigma"; version="0.3.0"; sha256="0ld3jhxrpyrhjklwif4jf1rn9ykx218pqzn9bfl0qdxr6cr4hhwy"; depends=[crul jsonlite plyr tibble xml2]; };
   enpls = derive2 { name="enpls"; version="5.9"; sha256="07id08k7pg2gvlyn8vnjprpr0gnggldg9am1h62s50dw54axixwd"; depends=[doParallel foreach ggplot2 plotly pls reshape2 spls]; };
   enrichR = derive2 { name="enrichR"; version="1.0"; sha256="0lfdr45sdyqhvgz8q4qdbk12mpv86d6id665kq6aaslgr8jggfmn"; depends=[httr rjson]; };
   enrichvs = derive2 { name="enrichvs"; version="0.0.5"; sha256="0x91s03hz1yprddm6mqi75bm45ki3yapfrxmap7d4qc0hi06h22k"; depends=[]; };
   enrichwith = derive2 { name="enrichwith"; version="0.1"; sha256="10x7p0s96hkalnnnwx2gczywblqxig9p4pllzk1ciyjjfidsc9va"; depends=[]; };
-  ensembleBMA = derive2 { name="ensembleBMA"; version="5.1.4"; sha256="14zq22h8nna7j403c1x9py90fwas8fg0vq3im2zh31dyrk1j8d7k"; depends=[chron]; };
+  ensembleBMA = derive2 { name="ensembleBMA"; version="5.1.5"; sha256="0p744151pbj278lyc8d8p7rc20n70abpfgxz6jr10jarmq3r6x7l"; depends=[chron]; };
+  ensembleEN = derive2 { name="ensembleEN"; version="1.1.2"; sha256="033i4bcnr62kmrp1fafdw6vx8ir38kqchgxp4fidg3i750nkjnda"; depends=[Rcpp RcppArmadillo]; };
   ensembleMOS = derive2 { name="ensembleMOS"; version="0.8.1"; sha256="1xbk3m4b619wni64i7wrccgp7gwaql2g6lg42lqwbsscdr3j0cls"; depends=[chron ensembleBMA evd]; };
   ensembleR = derive2 { name="ensembleR"; version="0.1.0"; sha256="0xvq1jlsp7gsk46i847nfvadxwlh09gi2rgwss2wf2xmh1855ray"; depends=[caret]; };
   ensemblepp = derive2 { name="ensemblepp"; version="0.1-0"; sha256="1b3rhg8mv1x3caz3xg84cwx8m88055n6yl36d9i4ws6vbj8vx68f"; depends=[]; };
   ensurer = derive2 { name="ensurer"; version="1.1"; sha256="1gbbni73ayzcmzhxb88pz6xx418lqjbp37sdkggbrxcyhsxpdkid"; depends=[]; };
-  entropart = derive2 { name="entropart"; version="1.4-8"; sha256="02vji9gwr8gbfcsfrlsn3jddva3bj0kmy1nq28mjl8ic25snwybf"; depends=[ade4 ape EntropyEstimation geiger vegan]; };
+  entropart = derive2 { name="entropart"; version="1.5-3"; sha256="02jzcqb7sqg9fcf2vi4myki9mgdsx0jwyf535zzh124h1bwz3f3y"; depends=[ade4 ape EntropyEstimation geiger vegan]; };
   entropy = derive2 { name="entropy"; version="1.2.1"; sha256="10vg4818q5g54pv2nn9x5i7pvky5nsv96syy47pz2mgqp1273cpd"; depends=[]; };
   envDocument = derive2 { name="envDocument"; version="2.4.0"; sha256="0r7h9p0b0gr2l18mv1ydlamsc0iq474dfhp450mdfnw2q289mhrn"; depends=[]; };
-  enveomics_R = derive2 { name="enveomics.R"; version="1.1.6"; sha256="115rqddy5llsncj5nbscan26lqr8x9fmyxxl3c8gpiyil8c266ja"; depends=[fitdistrplus investr modeest sn]; };
+  enveomics_R = derive2 { name="enveomics.R"; version="1.1.7"; sha256="1mcq37i8k4s15909dln8hvc4wkjwbbjx1054grm8174vl4mhpqvq"; depends=[fitdistrplus investr modeest sn]; };
   enviGCMS = derive2 { name="enviGCMS"; version="0.3.4"; sha256="1wjf1rxwzd590qsyljw1pd59kppx91m32p6nkdy4yvbnv39rk8dq"; depends=[BiocParallel genefilter limma mixtools qvalue rcdk RColorBrewer sva xcms]; };
   enviPat = derive2 { name="enviPat"; version="2.2"; sha256="1cf1h4v05riivjwil4167sncdxzgxf3r4snx1imjb6s4msx67ibi"; depends=[]; };
   enviPick = derive2 { name="enviPick"; version="1.5"; sha256="04q6zwqq2ip8b8h2n1jpgx1bzcvi7lazljs0806wiakbc79x232p"; depends=[readMzXmlData shiny]; };
@@ -5814,15 +5937,15 @@ in with self; {
   envlpaster = derive2 { name="envlpaster"; version="0.1-2"; sha256="11a5n40k1ln5gxxvwq1vh4dhmhifhlm89hkhf36qnhj4bjh3v3y0"; depends=[aster aster2 caTools MASS]; };
   epade = derive2 { name="epade"; version="0.3.8"; sha256="1alvsifc6i71ilm1xxs1d7sqlapb48bqd6z2n4wi6pqcjvwp7bif"; depends=[plotrix]; };
   epandist = derive2 { name="epandist"; version="1.1.1"; sha256="0hxgbjns5bk82rgcmykxifnnxcnqdzmkimkkmpdif64zr5g3gjdg"; depends=[]; };
-  epanet2toolkit = derive2 { name="epanet2toolkit"; version="0.1.3"; sha256="1s10qkvfn9i4ddwqnfwv9fqdv2860vfhb9nha09cjglf9iqss7lx"; depends=[]; };
-  epanetReader = derive2 { name="epanetReader"; version="0.5.1"; sha256="19w4cckdhc8qjvncymznd9jnwj16gklpp2fb96x4rf9qnmh8zdvq"; depends=[]; };
+  epanet2toolkit = derive2 { name="epanet2toolkit"; version="0.2.1"; sha256="18drz4pi2mqqwp2ji3a8k6mxh04n8yrwggf2p1k7bg3jchgh0kx3"; depends=[]; };
+  epanetReader = derive2 { name="epanetReader"; version="0.6.2"; sha256="0xj56ykfrm7m2r0rr4abgv6ip40nc2j1byxhmi7m97b2q953akld"; depends=[]; };
   epiDisplay = derive2 { name="epiDisplay"; version="3.2.2.0"; sha256="1f9kifjgdwxs7c236nsr369ij71rj7l5ady88h4n5p5pjw2h451a"; depends=[foreign MASS nnet survival]; };
-  epiR = derive2 { name="epiR"; version="0.9-91"; sha256="1z83kvfwjj1crla322vrjj3zzadqmfy4yzhgmdwasjxl7yi2a28x"; depends=[BiasedUrn survival]; };
+  epiR = derive2 { name="epiR"; version="0.9-93"; sha256="1i0vi1dx5pjq4rcw8r9g7qkhrn4ra8lffrspzkrrjj12y97izmrg"; depends=[BiasedUrn survival]; };
   epibasix = derive2 { name="epibasix"; version="1.3"; sha256="0d0087sa8lqw35pn7gdg2qqzw3dvz57sgavymwl1ybcj5d4lsbyk"; depends=[]; };
   epicontacts = derive2 { name="epicontacts"; version="1.1.0"; sha256="0f4a1y311z3fxw7ygj6fgsq6d2qn0ivxsjlh742pkmg3jb63s0f3"; depends=[colorspace dplyr igraph magrittr threejs visNetwork]; };
   epidata = derive2 { name="epidata"; version="0.1.0"; sha256="1lp6hnjzga787abq94k8v48wlikpp5hj1xwmxc8nj1imyr4r8a4h"; depends=[dplyr httr jsonlite purrr readr rvest stringi tidyr xml2]; };
   epifit = derive2 { name="epifit"; version="0.1.2"; sha256="1i1ngb5kh03gyx1702fwav3dc3mqry1wjzc7ry36hdw0ngawid34"; depends=[MASS]; };
-  epinet = derive2 { name="epinet"; version="2.1.7"; sha256="10mqc3xy24mjbk9np5mp41216hj6yc9jqxl3ybgysmd80y3qgf39"; depends=[network]; };
+  epinet = derive2 { name="epinet"; version="2.1.8"; sha256="10bgq66n99kkz0nhmsz508aypxk57zk19p5l3xrb28n72k4rfgrf"; depends=[network]; };
   episensr = derive2 { name="episensr"; version="0.9.2"; sha256="1w1228q8q2ysi3xi3m8a9z0c7japj97dssjkzpjcrng094cy82is"; depends=[actuar boot ggplot2 gridExtra llogistic logitnorm plyr reshape trapezoid triangle]; };
   episheet = derive2 { name="episheet"; version="0.2.0"; sha256="15c4xbam9b60xkkgmbswj4raln49hk43pxp2l75a7j1wykgkif95"; depends=[dplyr ggplot2 magrittr tidyr]; };
   episode = derive2 { name="episode"; version="1.0.0"; sha256="1djk36jkvr8xvhfddqg6xsmhxc3yrgivkm8g2hr4n1qixsk1ad8m"; depends=[glmnet Matrix nnls Rcpp RcppArmadillo]; };
@@ -5831,14 +5954,14 @@ in with self; {
   epitab = derive2 { name="epitab"; version="0.2.1"; sha256="0q8fxxx7ddzaj8dxxlsh1a2gxf6byw5041mr7abac9yjjga2kz97"; depends=[kableExtra knitr MASS survival xml2]; };
   epitable = derive2 { name="epitable"; version="0.1.2"; sha256="1g0ab5bah7v52mzsyfxdv8azmpz66pipbc15q3vpvvhl3gjhsaik"; depends=[broom dplyr htmlTable magrittr purrr readr rlang stringr survival tidyr tidyverse]; };
   epitools = derive2 { name="epitools"; version="0.5-10"; sha256="1qqa2kam3j3mkbgk62g6lwygk2fkdlrpbi27wl37j4dkdkvx013m"; depends=[]; };
-  epitrix = derive2 { name="epitrix"; version="0.1.0"; sha256="0ndirphkpzjlz9pi7r628if1fb4q8wjyn5dydwqpyr6dwp1i6rqv"; depends=[digest distcrete stringi]; };
+  epitrix = derive2 { name="epitrix"; version="0.1.1"; sha256="1qskgwfh5l3v5pysbs1na0ahfc3qklls8fg9fp0yc0rizym6avhr"; depends=[digest distcrete stringi]; };
   eply = derive2 { name="eply"; version="0.1.0"; sha256="18q40n06gbqg5cs0jknlxk5x0pwcbjnfb27ysmbf76s826qdc8gh"; depends=[magrittr]; };
   epoc = derive2 { name="epoc"; version="0.2.5-1"; sha256="1r19cvcqf39yf09n3znbdy3dsr7z96yx6zib6031mqqdsxaav5qd"; depends=[elasticnet graph irr lassoshooting Matrix Rgraphviz survival]; };
   epr = derive2 { name="epr"; version="3.0"; sha256="0czfz6qkcpa2qqs3pqii27hgpdvdzfrvxl0ip67v58hamq7kvjfv"; depends=[car lme4]; };
   epxToR = derive2 { name="epxToR"; version="0.3-0"; sha256="0ckz7cvqsdilfkqap88brh4av9zv1fl3ijs4h4vlwwn7qvdcnhay"; depends=[httr XML]; };
   eqs2lavaan = derive2 { name="eqs2lavaan"; version="3.0"; sha256="1lj6jwkfd84h9ldb6l74lrx2pnsl1c0d7mnrcrjkska87djb2nzd"; depends=[lavaan stringr]; };
   eqtl = derive2 { name="eqtl"; version="1.1-7"; sha256="0xfr8344irhzyxs9flnqn4avk3iv1scqhzac5c2ppmzqhb398azr"; depends=[qtl]; };
-  equSA = derive2 { name="equSA"; version="1.1.3"; sha256="16kc07wddcyl060sqrzppgp7rjqn9109j0h7979cjnw8szspib0l"; depends=[huge igraph mvtnorm speedglm XMRF ZIM]; };
+  equSA = derive2 { name="equSA"; version="1.1.5"; sha256="0sknx2p820i26m1d0ypz4ay5rm4j9i97nvcd3wxawqk72ypvbvw1"; depends=[huge igraph mvtnorm speedglm XMRF ZIM]; };
   equaltestMI = derive2 { name="equaltestMI"; version="0.1.0"; sha256="1zqhgx1x6lqjwqisl3ydb6yqp3jn6x7dgnc57r93v73sjx2j5aiz"; depends=[lavaan]; };
   equate = derive2 { name="equate"; version="2.0.6"; sha256="0fkgz4747wf2n1sfkskpbp20zdmxvykqhncr7a8wl5lp314r48x3"; depends=[]; };
   equateIRT = derive2 { name="equateIRT"; version="2.0-4"; sha256="0j5dpgp4r5qisgw65yk7x9nwq7wxfppp0n0qqg734gqwjyfyp68b"; depends=[mirt statmod]; };
@@ -5858,6 +5981,7 @@ in with self; {
   erp_easy = derive2 { name="erp.easy"; version="1.1.0"; sha256="193n45w0rq3cy0nmxvv0h6s3yr8kfjlg90nd4dnqlsq85zlsizij"; depends=[gtools plyr signal]; };
   erpR = derive2 { name="erpR"; version="0.2.0"; sha256="1y6abc5fkcyyjh36maj1zbxppqzwd5wkvzvqahyvzsz5fqpjkcdx"; depends=[rpanel]; };
   errint = derive2 { name="errint"; version="1.0"; sha256="1ya7fsvwhmgxw87r32m4345n8pw2pbpv026xvml03s1kiam8qwbw"; depends=[rootSolve VGAM]; };
+  errorist = derive2 { name="errorist"; version="0.0.1"; sha256="1569yvncc9rdzchs7cvx44dhy8xf10g2hwkiy3kp68h47qghxlbd"; depends=[searcher]; };
   errorizer = derive2 { name="errorizer"; version="0.2.1"; sha256="10p7ydm81x2gls0wn692llgj2rxhg4s96rv7gvihmgi5dflraypq"; depends=[]; };
   errorlocate = derive2 { name="errorlocate"; version="0.1.2"; sha256="1qlwdvy7i62hpnfrryzmqwmygxa8mjc7q92g6k5n9r2r179q7h09"; depends=[lpSolveAPI validate]; };
   errors = derive2 { name="errors"; version="0.2.0"; sha256="0l7yxshfc2ig7354r3vk35fsx2vyj09w7abwxakic93grvr09a71"; depends=[]; };
@@ -5866,24 +5990,28 @@ in with self; {
   esc = derive2 { name="esc"; version="0.4.0"; sha256="07mgf1kdz6gjkmbsis24gjsppclaxlf7b03jpvasm1k4snfvgb5h"; depends=[dplyr purrr readr sjmisc tibble]; };
   eshrink = derive2 { name="eshrink"; version="0.1.0"; sha256="0s1jl652za7qwv70kmc1h3vbwlijl49527pwpm0z347lz2jdcigj"; depends=[glmnet MASS]; };
   esmisc = derive2 { name="esmisc"; version="0.0.3"; sha256="1d6xrdxwn85c8s60s7vzaymh7wa9f7fzd79hq5spzd12fr3zisvj"; depends=[ggplot2 raster readr]; };
-  esmprep = derive2 { name="esmprep"; version="0.1.0"; sha256="0yv73czpvl6xdwwcxgssm6yw33lr3s27v4r67gcbslnidhcbq192"; depends=[lubridate]; };
+  esmprep = derive2 { name="esmprep"; version="0.1.3"; sha256="0s5ij63v3v9hx1xnl8ygbnxbgik65yd8xn3irpbvc41mp9spgcdz"; depends=[lubridate]; };
   esreg = derive2 { name="esreg"; version="0.3.1"; sha256="19ikfy0g8yd224ah4gyq2k29lz3gagc6vrcv53awvdadqw0cpz8l"; depends=[quantreg Rcpp RcppArmadillo]; };
   ess = derive2 { name="ess"; version="0.0.1"; sha256="1696rps3abznfb1bvyp1pymw0p48f13lw9wfqdiy049wh4kqm96l"; depends=[haven httr stringr XML xml2]; };
+  essHist = derive2 { name="essHist"; version="1.0.1"; sha256="0xnf5cxc7x3chs508am9qhnavz89fim10ffkn8mp1b29jdw88aax"; depends=[Rcpp]; };
   estatapi = derive2 { name="estatapi"; version="0.3.0"; sha256="0gjc5x1b2l5qnwdg77nzy6d7bf9q93ll39sfy89izqm8wsydwwkp"; depends=[dplyr httr purrr readr]; };
-  estimability = derive2 { name="estimability"; version="1.2"; sha256="13b80bpnbrarazjvnpnk91ljjsqgfm2fm3gy66aj09cmmsmv199h"; depends=[]; };
+  estimability = derive2 { name="estimability"; version="1.3"; sha256="0cifdaa71spkcxl4db4z884jrya865sg3dhcv4isd8fnzg2pjcd3"; depends=[]; };
+  estimatr = derive2 { name="estimatr"; version="0.4.0"; sha256="19k8b4rglz4b7r12x8da6wzrkd0j40dp1zxzdwj6pfw3fhpacl2i"; depends=[Rcpp RcppEigen]; };
   estout = derive2 { name="estout"; version="1.2"; sha256="0whrwlh4kzyip45s4zifj64mgsbnrllpvphs6i5csb7hi3mdb3i5"; depends=[]; };
   estprod = derive2 { name="estprod"; version="0.0.1"; sha256="0nd2iz1gqinvppyxgxsdh9m26v46h2ra3cc4nqz6dqnqkslzrl4k"; depends=[boot Formula lazyeval minpack_lm]; };
+  estudy2 = derive2 { name="estudy2"; version="0.8.4"; sha256="190wxdy1qsf8fgpbp2cr0blwa97vgmdw83pmfk9i44zkpm4nrij1"; depends=[matrixStats Rcpp tseries zoo]; };
   esvis = derive2 { name="esvis"; version="0.1.0"; sha256="19avayz2igw8sjc2743a9c3ikyrf18d42czadd98gdn8ny53vr6b"; depends=[sfsmisc]; };
   etable = derive2 { name="etable"; version="1.2.0"; sha256="17xahaf2fz1qgqjaw8qbnss95il6g47m3w00yqc5nkvv37gs0q7c"; depends=[Hmisc xtable]; };
   etasFLP = derive2 { name="etasFLP"; version="1.4.0"; sha256="04d526yajakzivlcsz8631p0j482cbbgfpdmzkc9zr1m4495xxif"; depends=[fields mapdata maps rgl]; };
+  ether = derive2 { name="ether"; version="0.1.4"; sha256="1q6qxda5iw8zj7gy9h35apij5mbndd969ddip7zn5d720131kqra"; depends=[dplyr httr jsonlite Rmpfr]; };
   etl = derive2 { name="etl"; version="0.3.7"; sha256="045hkh95ki3s10l9mz4710ws2i9and4rqb0qk1c5sfslglc0riq5"; depends=[DBI downloader dplyr lubridate readr rlang rvest stringr tibble xml2]; };
   etm = derive2 { name="etm"; version="0.6-2"; sha256="0sdsm6h502bkrxc9admshkrkqjczivh3av55sha7542pr6nhl085"; depends=[lattice survival]; };
   etma = derive2 { name="etma"; version="1.1-1"; sha256="0g9244yx50y1gw0f37hskbcgyv4nldmzr86v3rmf3afabmjbyzjj"; depends=[]; };
   etrunct = derive2 { name="etrunct"; version="0.1"; sha256="0ayazgyqlc8jcqr03cwfmfhm4pck6xri1r6vkgqy4arqkrrnrcqr"; depends=[]; };
   etseed = derive2 { name="etseed"; version="0.1.0"; sha256="1kqbhvryqzmckk91ynn68yd7msqdsl6h818r164180f10flszr37"; depends=[httr jsonlite R6]; };
   eulerian = derive2 { name="eulerian"; version="1.0"; sha256="0yhpnx9vnfly14vn1c2z009m7yipv0j59j3s826vgpczax6b48m0"; depends=[graph]; };
-  eulerr = derive2 { name="eulerr"; version="3.0.1"; sha256="0ag2dviqnkzi1ypkiyy9nz7hbyrf3yywpx5pafprirdwnw7b94hi"; depends=[GenSA lattice Rcpp RcppArmadillo]; };
-  europepmc = derive2 { name="europepmc"; version="0.1.4"; sha256="0kh61jmr2y0wjqch0jzk594anpwq56x9lhx6sx54y2pqjqw68b0i"; depends=[dplyr httr jsonlite plyr urltools xml2]; };
+  eulerr = derive2 { name="eulerr"; version="4.0.0"; sha256="1zjqzlr67qihvh7v66rggz8khf6f11wqw2cvxjvg07qmh3xk7sf5"; depends=[lattice polyclip Rcpp RcppArmadillo RcppDE]; };
+  europepmc = derive2 { name="europepmc"; version="0.2"; sha256="1kh1mma21jjwlwxq2h3l5klzlgy98zsryhs1si9z5cfx48lszxdb"; depends=[dplyr httr jsonlite plyr progress urltools xml2]; };
   europop = derive2 { name="europop"; version="0.3.1"; sha256="1ym257bxr4a0dmln1j8x3pf87wrryzgqyzhvk61whc6n2bj62x1s"; depends=[]; };
   eurostat = derive2 { name="eurostat"; version="3.1.5"; sha256="128rlkkxdpl95wjxnrw8yzxpc6sml0vaghnaz0ra90ak1s43ndda"; depends=[classInt httr jsonlite RColorBrewer readr sp stringi stringr tibble tidyr]; };
   eva = derive2 { name="eva"; version="0.2.4"; sha256="03jsiz6bkavwxpgllxaw8czahmm2rh5h8hhk5j7i9clcjx244vvj"; depends=[EnvStats Matrix]; };
@@ -5895,36 +6023,35 @@ in with self; {
   evdbayes = derive2 { name="evdbayes"; version="1.1-1"; sha256="0lfjfkvswnw3mqcjsamxnl8hpvz08rba05xcg0r47h5vkgpw5lgd"; depends=[]; };
   event = derive2 { name="event"; version="1.1.0"; sha256="1nq34bz9dsixidym3n255vmap3gjx9nfk8pc5s7w026faf96dr2v"; depends=[rmutil]; };
   eventInterval = derive2 { name="eventInterval"; version="1.3"; sha256="0nybzy2mpmazcvz06mkv7l9741mjm3i2q2sindq0777vb2k4504v"; depends=[MASS]; };
-  eventdataR = derive2 { name="eventdataR"; version="0.1.1"; sha256="1vabawwb41v3gs7x3s1w8nll02h544xbsr21c2wbdx9h304rs54m"; depends=[]; };
+  eventdataR = derive2 { name="eventdataR"; version="0.1.2"; sha256="0f0w5cir3hc01ag9l69y27cfp6bgh1ikk4n99z7pb16373ficjjw"; depends=[]; };
   events = derive2 { name="events"; version="0.5"; sha256="1zka4ygymifs8snd7cabl11b5lg3f8g8370dkm9ybl40bn8vvqq2"; depends=[]; };
   eventstudies = derive2 { name="eventstudies"; version="1.2"; sha256="0z449j7yrd6j6hhacz6f048ibilib6m97684cz2wc4pqq2wlj8hg"; depends=[boot sandwich testthat xts zoo]; };
   evidenceFactors = derive2 { name="evidenceFactors"; version="1.00"; sha256="12wndimbygn7h57f3q0xmxmvqrcdj98f0a58m22z2l0vmym53rhb"; depends=[sensitivitymv]; };
   evir = derive2 { name="evir"; version="1.7-3"; sha256="1kn139vvzdrx5r9jayjb4b0803b0bbppxk68z00gdb50mxgvi593"; depends=[]; };
-  evmix = derive2 { name="evmix"; version="2.7"; sha256="0x3m4lwpwcavr950q66p7bkimshnvav4842dr505g5rc9vkw9xxg"; depends=[gsl MASS SparseM]; };
+  evmix = derive2 { name="evmix"; version="2.9"; sha256="1w1mm858515hnjpq2yjj0x05skyprhnvbpyif4mdcm24blyb81di"; depends=[gsl MASS SparseM]; };
   evobiR = derive2 { name="evobiR"; version="1.1"; sha256="0502xj1gv2g943vfqyllz4sr5z4mixf5vqlqi2v96mymnv9iwsr8"; depends=[ape geiger phytools seqinr shiny]; };
   evolqg = derive2 { name="evolqg"; version="0.2-5"; sha256="11n0gxkxhg1d2ziwbipqvyccgnsrzm3mk4xy2d7nxn662q1yl2ah"; depends=[ape coda expm ggplot2 igraph Matrix matrixcalc MCMCpack mvtnorm plyr Rcpp RcppArmadillo reshape2 vegan]; };
   evolvability = derive2 { name="evolvability"; version="1.1.0"; sha256="0lbyidb86yzvcfw86jfwnzbpijn64jr8fasycqq4h3r9c0x2by3j"; depends=[coda]; };
   evoper = derive2 { name="evoper"; version="0.4.0"; sha256="11l55jj7f4ggwvimvl3d2sv2nyds29bl4dai6ycpgnff7wwdv43g"; depends=[boot deSolve futile_logger ggplot2 plot3D plyr reshape rrepast]; };
   evt0 = derive2 { name="evt0"; version="1.1-3"; sha256="08sbyvx49kp3jsyki60gbbnci26d6yk0yj2zcl4bhfac8c3mm6ya"; depends=[evd]; };
-  evtree = derive2 { name="evtree"; version="1.0-5"; sha256="06afqr0gsyh80f2j56vl4cbjsz5gpywri87ykfmf1wxls7jqxqac"; depends=[partykit]; };
-  ewoc = derive2 { name="ewoc"; version="0.1.0"; sha256="15y4w8wpggkhf5cy24kgkf9xnig9a9lzszz31pc46ii5i5cwvj0v"; depends=[coda Formula ggplot2 rjags]; };
+  evtree = derive2 { name="evtree"; version="1.0-6"; sha256="0nvk78haghvp6vw6936di0bd5gfv603nxzgw3i647i68291wav0f"; depends=[partykit]; };
+  ewoc = derive2 { name="ewoc"; version="0.2.0"; sha256="0kanx14fhcbqz6gpyj7628vgy9fwz3ji5mkd4107b8pgpz2hkg00"; depends=[coda doParallel foreach Formula ggplot2 rjags]; };
   exCon = derive2 { name="exCon"; version="0.2.5"; sha256="0gqnv01dw4ncf3x3p74pc6f14a1ixq7icl2p18hsmvxdqqg7kgy7"; depends=[jsonlite]; };
   exact2x2 = derive2 { name="exact2x2"; version="1.5.2"; sha256="12m3kaxdrf4bsw7lrylk15nimhy4sgmjbnlqm684y2kyvii9yrg0"; depends=[exactci ssanv]; };
   exactLoglinTest = derive2 { name="exactLoglinTest"; version="1.4.2"; sha256="0j146ih9szzks9r45vq1jf47hrwjq081q1nsja5h1gpllks8217h"; depends=[]; };
   exactRankTests = derive2 { name="exactRankTests"; version="0.8-29"; sha256="0sj4bf0sab2rsgh967i5jl7ml2l1niydqmyn7c6ybai1gavsdpi1"; depends=[]; };
   exactci = derive2 { name="exactci"; version="1.3-3"; sha256="03r35f6dyrck5pf43ypb1sjwfnvkhjkm1mbms3wh67ayfs2ypn0s"; depends=[ssanv]; };
   exactmeta = derive2 { name="exactmeta"; version="1.0-2"; sha256="1v807ns799qajffky4k18iah0s3qh2ava6sz5i85hwx9dhkz19h4"; depends=[]; };
-  exampletestr = derive2 { name="exampletestr"; version="1.0.1"; sha256="0352rv81isk820srwfpz7bf3349fpbygbq06lmjz8qgjvdfl1r4i"; depends=[devtools filesstrings formatR magrittr purrr roxygen2 stringr]; };
+  exampletestr = derive2 { name="exampletestr"; version="1.2.0"; sha256="05p819a6s6anxjqvs10df9kcfdg7lkg1205iw635db9g6biplrb7"; depends=[checkmate devtools filesstrings magrittr purrr readr roxygen2 stringr styler]; };
   exams = derive2 { name="exams"; version="2.3-0"; sha256="0y21cx6knx253gka1bib8z0jmyndl4k7c2d8hfh3rwn5bdqyqj53"; depends=[]; };
-  excerptr = derive2 { name="excerptr"; version="1.3.1"; sha256="0z1qgivk4plfap9j1fllx6wdj6z4nyblgj0rqjvgalk1sjk9b5zl"; depends=[git2r rprojroot rPython]; };
-  excursions = derive2 { name="excursions"; version="2.2.2"; sha256="1f6vvv33205lj6hsmmhx3q82mkhh0shzyk5hrwzf2nh1cn61w1x0"; depends=[Matrix sp]; };
+  excerptr = derive2 { name="excerptr"; version="1.4.0"; sha256="0z69lqfdm2dh9z6rqhfnj6f4b2p6sgmlvcxasg49wd0qasx86ph6"; depends=[git2r rprojroot rPython]; };
+  excursions = derive2 { name="excursions"; version="2.3.2"; sha256="1fh04kkv9nj7wxrklpapsfh0xi8k5hfaa1f4dvnz2wxvzz3iz5nb"; depends=[Matrix sp]; };
   exif = derive2 { name="exif"; version="0.1.0"; sha256="12phqn5x1x0xs2xczl3064q983dalm261vqpyafhdcndm1y3gwbc"; depends=[Rcpp]; };
   exifr = derive2 { name="exifr"; version="0.2.1"; sha256="0969ip7vwhs3r9zwy5l1gqg886yl4gfw8ss2frnq9nmqpn1ib1v2"; depends=[curl dplyr jsonlite purrr tibble]; };
   exp2flux = derive2 { name="exp2flux"; version="0.1"; sha256="1b3ychb4wcf6dbccx2ddms5xygdgc296cnw4474fm81yrfjznplv"; depends=[gage igraph sybil]; };
   expandFunctions = derive2 { name="expandFunctions"; version="0.1.0"; sha256="0661l4ab0xhjidmh8ycvymhp3wgxafm7nd1c59bfpxhyhz76n1p4"; depends=[glmnet orthopolynom plyr polynom]; };
   expands = derive2 { name="expands"; version="2.0.0"; sha256="1ai269sic10hzw70whwv477yfgx5nhz4m06dfg373jp6i7vi5p9x"; depends=[ape flexmix matlab moments rJava]; };
-  expectreg = derive2 { name="expectreg"; version="0.39"; sha256="1mxhv6phc3lgp0zz20wszx4nr3by9p6492wcb0x8wn8p8p1sy1b3"; depends=[BayesX mboost quadprog]; };
-  experiment = derive2 { name="experiment"; version="1.1-1"; sha256="07yaf5k5fpymz2yvr52zbbi60g0v84qryvqqjq3sjq2mb1fjfz1p"; depends=[boot MASS]; };
+  experiment = derive2 { name="experiment"; version="1.1-2"; sha256="1wswfxfk3b5gvdxb6i3mzx66i1qszvb9alfwhv95y0dr5q6vss1w"; depends=[boot MASS]; };
   expert = derive2 { name="expert"; version="1.0-0"; sha256="0y9vcigvzhymalpv31b9nvmr86z1dz7x29yj838vks0dsv23rgrf"; depends=[]; };
   expint = derive2 { name="expint"; version="0.1-4"; sha256="17vp7znbxlf5zb944snmnml2w42avj9k70fisb8az047i3kdbvfh"; depends=[]; };
   explor = derive2 { name="explor"; version="0.3.3"; sha256="1b3swb7ikp2ik3300ljg2rll5gka4l4lfg95bqbgap3ph4dclv7y"; depends=[dplyr DT ggplot2 highr scatterD3 shiny tidyr]; };
@@ -5933,9 +6060,9 @@ in with self; {
   expoRkit = derive2 { name="expoRkit"; version="0.9"; sha256="0raf0m2nfbdbd1pc4lincyp8y8lgn3bfi4hn0p04plc5p40l1gvc"; depends=[Matrix SparseM]; };
   expoTree = derive2 { name="expoTree"; version="1.0.1"; sha256="0hj1x4niqp0ghqik3mz733nc3zpnhyknrdpzpj6y2rfia2ysdiz8"; depends=[ape deSolve]; };
   expp = derive2 { name="expp"; version="1.1"; sha256="13zbhkkcshqrpln5gsa051d390q9ij97lawsdbd5j7fj9hxm9pwh"; depends=[deldir rgeos sp spdep]; };
-  exprso = derive2 { name="exprso"; version="0.2.0"; sha256="1kzlb7h868s99n7vbqcy0ddc2r72p9jj3jbi2wmkbr81cz8q4414"; depends=[cluster e1071 kernlab lattice magrittr MASS nnet plyr randomForest ROCR sampling]; };
+  exprso = derive2 { name="exprso"; version="0.2.7"; sha256="0s8vf1rn7mwsiypd3k8diki5brlx95rzsqikprg9j9difv03f976"; depends=[cluster e1071 kernlab lattice MASS nnet plyr randomForest ROCR sampling]; };
   expsmooth = derive2 { name="expsmooth"; version="2.3"; sha256="0alqg777g7zzbjbg86f00p2jzzlp4zyswpbif7ndd0zr8xis6zdc"; depends=[forecast]; };
-  expss = derive2 { name="expss"; version="0.8.3"; sha256="0y0z289wfskd66cfzdishhvydbggi28smc616hp7r31p792shng0"; depends=[data_table DT foreign htmlTable htmltools magrittr matrixStats]; };
+  expss = derive2 { name="expss"; version="0.8.6"; sha256="0yzbgmqblbxk494yhrs3mnr2jgsxvybamdbwc5w2w389baa78wny"; depends=[data_table foreign htmlTable magrittr matrixStats]; };
   exptest = derive2 { name="exptest"; version="1.2"; sha256="0wgjg62rjhnr206hkg5h2923q8dq151wyv54pi369hzy3lp8qrvq"; depends=[]; };
   exreport = derive2 { name="exreport"; version="0.4.1"; sha256="0vj60rchhrc5q6x1kv7b95fcmh2a5qynli2w54rrrw1nx54xm8c2"; depends=[ggplot2 reshape2]; };
   exsic = derive2 { name="exsic"; version="1.1.1"; sha256="1k6nqs9i4iivxnk4nkimp6zvdly274wibkmx9n0wz01gnzxqil0p"; depends=[markdown stringr]; };
@@ -5946,7 +6073,7 @@ in with self; {
   extfunnel = derive2 { name="extfunnel"; version="1.3"; sha256="162w5b2wjs3yqy8jisamsapav6swa8sskf1b6x5hglnrv3i4qyyy"; depends=[rmeta]; };
   extlasso = derive2 { name="extlasso"; version="0.2"; sha256="05774y0i01lrbyws6zx5ymhcglllv1wc7gzrnyx8i5d1lxdinsyd"; depends=[]; };
   extraBinomial = derive2 { name="extraBinomial"; version="2.1"; sha256="0qmvl35f7n78kghszwyaz4wzbswqy4p98c3b6alzrc2ldsq6pq5z"; depends=[]; };
-  extraDistr = derive2 { name="extraDistr"; version="1.8.7"; sha256="1r90q14snx6h665qkij1lza2bs87iw61y6waabdzw6p3cqgg4pds"; depends=[Rcpp]; };
+  extraDistr = derive2 { name="extraDistr"; version="1.8.8"; sha256="0ywn4qwnamv36l1hw27l9y5kh3v6ha5781wsv2bz6szqjgg7kdb3"; depends=[Rcpp]; };
   extraTrees = derive2 { name="extraTrees"; version="1.0.5"; sha256="1rvvp2p9j8ih8fid1n17606pa23bjg3i2659w1l6w0jkb1p23zcx"; depends=[rJava]; };
   extracat = derive2 { name="extracat"; version="1.7-4"; sha256="1dply8sx9r9vshi5dycxs7bchf5g33qbq7w6i5w830glfy0lk3i5"; depends=[colorspace data_table ggplot2 hexbin plyr reshape2 scales TSP]; };
   extrafont = derive2 { name="extrafont"; version="0.17"; sha256="0b9k2n9sk23bh45hjgnkxpjyvpdrz1hx7kmxvmb4nhlhm1wpsv9g"; depends=[extrafontdb Rttf2pt1]; };
@@ -5957,7 +6084,7 @@ in with self; {
   extremogram = derive2 { name="extremogram"; version="1.0.2"; sha256="13k869v6j4ik9p8w0gf1absvb45xbd3nnwghsz0ix7y0vyvry358"; depends=[boot MASS]; };
   eyelinker = derive2 { name="eyelinker"; version="0.1"; sha256="1lwpm247czqm26zvv5c6lkhdxpp4svszfw74g9ys9vwvwhry9c15"; depends=[intervals magrittr plyr readr stringi stringr]; };
   eyetracking = derive2 { name="eyetracking"; version="1.1"; sha256="0ajas96s25hjp3yrg42hp78qjhl1aih04mjirkskx32qsyq5hfpv"; depends=[]; };
-  eyetrackingR = derive2 { name="eyetrackingR"; version="0.1.6"; sha256="0azfakn5kh80bvywqf52wy3c0q5k13zcasniggjf273f5z1415pn"; depends=[broom dplyr ggplot2 lazyeval tidyr zoo]; };
+  eyetrackingR = derive2 { name="eyetrackingR"; version="0.1.7"; sha256="1an39l4bkbw7s75y1pjgdwhixshdaawpy4kwyaqk7jkhhy7nl1nh"; depends=[broom dplyr ggplot2 lazyeval purrr tidyr zoo]; };
   ez = derive2 { name="ez"; version="4.4-0"; sha256="0a58s94x576dfz7wcbivrr2hmdh5x1vy16zwkqp9fmdzqx38pagq"; depends=[car ggplot2 lme4 MASS Matrix mgcv plyr reshape2 scales stringr]; };
   ezec = derive2 { name="ezec"; version="1.0.1"; sha256="0lpx55a8fhy6fqdv3zvzx9mh75q34r71v5kp96hkm9jzl4yvrpd2"; depends=[dplyr drc]; };
   ezglm = derive2 { name="ezglm"; version="1.0"; sha256="0x7ffk3ipzbdr9ddqzv0skmpj5zwazkabibhs74faxnld7pcxhps"; depends=[]; };
@@ -5973,7 +6100,7 @@ in with self; {
   fCertificates = derive2 { name="fCertificates"; version="0.5-4"; sha256="1a49gkzvb83lqqw65lxlaszpicn663hwi9wrbsb3f6z7znylkzaf"; depends=[fBasics fExoticOptions fOptions]; };
   fChange = derive2 { name="fChange"; version="0.1.0"; sha256="1pj4q9dsqqgv198kfv410qkpgynhd580bcsigmak598m5jx3rf7l"; depends=[fda lattice reshape2 sandwich sde]; };
   fCopulae = derive2 { name="fCopulae"; version="3042.82"; sha256="10wknqrrs5j63v7qnp5qmk85688r36vli4r99i49y2i2nv10yp5r"; depends=[fBasics fMultivar timeDate timeSeries]; };
-  fDMA = derive2 { name="fDMA"; version="2.2.1"; sha256="1yncwdzdc3592wzfz5q7wmvj9arhay7gsmh2z3aqx998l8y3rcdb"; depends=[doParallel foreach forecast gplots iterators MSwM png psych Rcpp RcppArmadillo tseries xts zoo]; };
+  fDMA = derive2 { name="fDMA"; version="2.2.3"; sha256="17c9qm32pmbn236ynkkk0z4fdfyij3h1kx7y2i9x3m5q1z7dzwb4"; depends=[doParallel foreach forecast gplots iterators MSwM png psych Rcpp RcppArmadillo tseries xts zoo]; };
   fExoticOptions = derive2 { name="fExoticOptions"; version="3042.80"; sha256="1b3y7j5ywic6xhsj2afq6y5f5l0npgav854rb87938rjckz95d4h"; depends=[fBasics fOptions timeDate timeSeries]; };
   fExpressCertificates = derive2 { name="fExpressCertificates"; version="1.2"; sha256="1r4qkhf7alasbwjz910b0x4dlzm72af06kv7v2vwyzvf3byn21c5"; depends=[fCertificates Matrix mvtnorm tmvtnorm]; };
   fExtremes = derive2 { name="fExtremes"; version="3042.82"; sha256="1n0afql4csgsqf7j9x2v8yxncvpknms643l9knm0fqb4pdbaw58c"; depends=[fBasics fGarch timeDate timeSeries]; };
@@ -5984,15 +6111,17 @@ in with self; {
   fNonlinear = derive2 { name="fNonlinear"; version="3042.79"; sha256="0kwjs7xx4ykw14mw3pff2axrq497jl4g23gbayswb8vrx1qhjibd"; depends=[fBasics timeDate timeSeries]; };
   fOptions = derive2 { name="fOptions"; version="3042.86"; sha256="1cqyggb1hb7z0gfgkziynz7nm85z0fn3bvz1iwpy49yy8ll7rfzr"; depends=[fBasics timeDate timeSeries]; };
   fPortfolio = derive2 { name="fPortfolio"; version="3042.83"; sha256="05dprxn0h2cd13m84rb1s5n8nr9m4v4dslqmm99481rp66kgc004"; depends=[fAssets fBasics fCopulae kernlab MASS quadprog Rglpk rneos robustbase Rsolnp slam timeDate timeSeries]; };
-  fRLR = derive2 { name="fRLR"; version="1.0"; sha256="19w7fkjlfv0ckb4psck5il5rpiknlfsrm26wf7l1x553mkdbrknq"; depends=[Rcpp]; };
   fRegression = derive2 { name="fRegression"; version="3042.82"; sha256="0pi777xfk101g0r2qpcd0qxqqfnvck3sii990d946ljw6366mamc"; depends=[fBasics lmtest mgcv nnet polspline timeDate timeSeries]; };
   fSRM = derive2 { name="fSRM"; version="0.6.4"; sha256="1n91gzjx9r3r3xl400w38miva0b69c0f23h2056kq9p1bax2nm86"; depends=[foreign ggplot2 gridExtra lavaan plyr reshape2 scales tcltk2]; };
   fTrading = derive2 { name="fTrading"; version="3042.79"; sha256="0xnfg4npfdrvmp1n6vbsm7if16n5j83b7y1i2m5b34cqnlz9d69y"; depends=[fBasics timeDate timeSeries]; };
   fUnitRoots = derive2 { name="fUnitRoots"; version="3042.79"; sha256="1hsv47dm0hx3s04g9h0bjdgi79zbfihnfxxdc2jskqp94yl7azsy"; depends=[fBasics timeDate timeSeries urca]; };
   fabCI = derive2 { name="fabCI"; version="0.1"; sha256="123bc56nnx6hcj257imsd8sc6d0pggw08lf4m0lr90631gcm1mkn"; depends=[]; };
-  face = derive2 { name="face"; version="0.1-3"; sha256="0l4sp79p72n6iqbgi5aqif1669rwx3pka7l91d8dsw7x60bhikxj"; depends=[Matrix matrixcalc mgcv]; };
+  fabricatr = derive2 { name="fabricatr"; version="0.2.0"; sha256="1jgfxifp7v80bddcs5zi5zidzhnzmsbvfa7qznaxyp3qknax2k67"; depends=[rlang]; };
+  face = derive2 { name="face"; version="0.1-4"; sha256="0kkgblxzhjzifxnym6g5psiwvfgydk1scqbxraldklm8c4a12zc3"; depends=[Matrix matrixcalc mgcv refund]; };
   facebook_S4 = derive2 { name="facebook.S4"; version="1.1.0"; sha256="1if3fgyvj6pbf48yjwa5fkn3s4rl6kj9s1nk6dwphykhx72ghzrj"; depends=[httr magrittr plyr rjson]; };
+  facilitation = derive2 { name="facilitation"; version="0.5.2"; sha256="0gyqa3njyynvdhfziq33xqc7cjhszii67mk8809ncvh6abkdx1hw"; depends=[animation Matrix Rcpp]; };
   factoextra = derive2 { name="factoextra"; version="1.0.5"; sha256="1l6m8k7qhdw8ndar8nhmym0lfyd1i2iszl1cicjax0vq23ss6xw1"; depends=[abind cluster dendextend FactoMineR ggplot2 ggpubr ggrepel reshape2 tidyr]; };
+  factoptd = derive2 { name="factoptd"; version="1.0.3"; sha256="1ir50im3kr1xhqk4qwrm2h5fq9gqgrwshbamvjlf8n1wnn03mcb6"; depends=[MASS partitions]; };
   factorMerger = derive2 { name="factorMerger"; version="0.3.2"; sha256="1drrzrazay0w42ls9r2bsbygmyah0hdpmlap8zmsjqnbl0xp6sq6"; depends=[agricolae colorRamps dplyr ggplot2 ggpubr knitr magrittr MASS mvtnorm proxy reshape2 scales survival]; };
   factorQR = derive2 { name="factorQR"; version="0.1-4"; sha256="1vl01fm5qfyhnqbl5y86vkr50b8cv07vzlqs3v6smqaqq6yp4lv4"; depends=[lattice]; };
   factorcpt = derive2 { name="factorcpt"; version="0.1.2"; sha256="17hwlsrj0fx4x05p6xvs6kl43a24icmnrzyvpf2vam5imwvmpvmm"; depends=[doParallel fields foreach iterators Rcpp RcppArmadillo]; };
@@ -6002,7 +6131,7 @@ in with self; {
   fail = derive2 { name="fail"; version="1.3"; sha256="0vfm6kmpmgsamda5p0sl771kbnsscan31l2chzssyw93kwmams7d"; depends=[BBmisc checkmate]; };
   faisalconjoint = derive2 { name="faisalconjoint"; version="1.15"; sha256="08sb4za8qyadvigq2z7b0r44qk2lpahpnz9nv16xfjb1zhdkz5w3"; depends=[]; };
   fakeR = derive2 { name="fakeR"; version="1.0"; sha256="0f4ngnd8s34j1327zp3aqnsiw0gfxkp1i24ng20hrmfl13s1qmxp"; depends=[mvtnorm polycor pscl VGAM]; };
-  fakemake = derive2 { name="fakemake"; version="1.0.2"; sha256="1f6hc5xxpvq8hgaf9ng4zd9fgwpirmjqlr7ykr4c4krkfb9f0hjx"; depends=[callr igraph MakefileR withr]; };
+  fakemake = derive2 { name="fakemake"; version="1.2.0"; sha256="1acd404fl0bc6xsal39vgx4j5jdqa24csn15cmw26yach7dxrm87"; depends=[callr igraph MakefileR withr]; };
   falcon = derive2 { name="falcon"; version="0.2"; sha256="09hlvwwj3k3nhcsxijjvv8x74a9m200ayjjplrp4baxvczwyq341"; depends=[]; };
   falconx = derive2 { name="falconx"; version="0.2"; sha256="0648mvbc7ga7vr2xqzyln3dgd11h5s4bqhv3p55mj7smr4qv7hv9"; depends=[]; };
   fam2r = derive2 { name="fam2r"; version="1.2"; sha256="0pq5cmzwk3s8cz5x8dsfb2d6qfpapkrwbzvkqmqkhcwhwryy40mm"; depends=[Familias paramlink]; };
@@ -6020,13 +6149,13 @@ in with self; {
   fasjem = derive2 { name="fasjem"; version="1.1.2"; sha256="1bbrcyyg96hakgla3604byrkn9034197vy2is048kdq20yr2y11n"; depends=[igraph]; };
   fast = derive2 { name="fast"; version="0.64"; sha256="098rk6kszdx3szcwvwzcv7zlcd6qvqvbqch7q8ilas6vbki81ba4"; depends=[zoo]; };
   fastAdaboost = derive2 { name="fastAdaboost"; version="1.0.0"; sha256="1pv1y6znvc37pgwk99v4r0hljhipq8v6r3r5cb5vhgyl0bfi8g38"; depends=[Rcpp rpart]; };
-  fastDummies = derive2 { name="fastDummies"; version="0.1.2"; sha256="15c5rkz4d7ghmm052ybd4l0gbbyr0wrihal4fi5y6cvss1jja7gq"; depends=[data_table]; };
+  fastDummies = derive2 { name="fastDummies"; version="1.0.0"; sha256="05jkgjd4aavy7631xczqvag51afyvr80ki1w6caznx5fc4z53wfb"; depends=[data_table]; };
   fastGHQuad = derive2 { name="fastGHQuad"; version="0.2"; sha256="0yv3wdyj7hs1gr3rq08k520v0ldmv5zzng709xjx2kchhwhmy8ah"; depends=[Rcpp]; };
   fastGraph = derive2 { name="fastGraph"; version="1.1"; sha256="1vbi5yssnh8hcbmrq1r437vpvj8hqd3vc8wmcy0nbyvnmyjaxkvb"; depends=[]; };
   fastHICA = derive2 { name="fastHICA"; version="1.0.2"; sha256="1h794ybbii0k7v3x0r1499zxdqa1i1dpi3i7idzqdrffnb5kmwlv"; depends=[energy fastICA]; };
   fastICA = derive2 { name="fastICA"; version="1.2-1"; sha256="108z2ymby5y4h8l4l2krqwm28rya93gq09yylgilnm3afvfrfabg"; depends=[]; };
   fastJT = derive2 { name="fastJT"; version="1.0.4"; sha256="1pa4qpcf4qmzk6s8qgk60n5ialz8gcj5m8d7xr10cmn4jfwghc7b"; depends=[Rcpp]; };
-  fastLink = derive2 { name="fastLink"; version="0.2.0"; sha256="1n8yzwlcvj1bcdzxvlprh5q3wk2mbw7jpc40bjc5mpgrx0vpf95c"; depends=[adagio data_table doParallel dplyr FactoClass foreach gtools Matrix plotrix Rcpp RcppArmadillo RcppEigen stringdist stringi stringr]; };
+  fastLink = derive2 { name="fastLink"; version="0.3.1"; sha256="0d77z88vv8gw1hp3cpnx481yn7p5y4nq3qzsv63bifad0msnqixy"; depends=[adagio data_table doParallel dplyr FactoClass foreach gtools Matrix plotrix Rcpp RcppArmadillo RcppEigen stringdist stringi stringr]; };
   fastM = derive2 { name="fastM"; version="0.0-2"; sha256="0q5dz47sqj6d4r3k6l6q34l5ajb8fjbf7xam75scp0mg3czswnfn"; depends=[Rcpp RcppArmadillo]; };
   fastR = derive2 { name="fastR"; version="0.10.3"; sha256="1sz6krxiamq3rp4h9ah2b1zvyyrlvsn7lpvrjv1xda2c1kqqkvmk"; depends=[lattice mosaic mosaicCalc mosaicData]; };
   fastR2 = derive2 { name="fastR2"; version="0.2.0"; sha256="1xwa4v0j2n0qxn1prhc9x0sz53fhsfbg2m1a6kfdp7cpvvk46pw5"; depends=[dplyr ggformula ggplot2 lattice magrittr maxLik miscTools mosaic numDeriv]; };
@@ -6038,11 +6167,12 @@ in with self; {
   fastcox = derive2 { name="fastcox"; version="1.1.3"; sha256="0jn19v6mkwgyz8x63xrfgkgnf0f2rq338r5qkhz690mdzr4c47a3"; depends=[Matrix]; };
   fastdigest = derive2 { name="fastdigest"; version="0.6-3"; sha256="02csl261v7nassi5119ygw6jglm8q6rssg7lgyxzj73mkyilm832"; depends=[]; };
   fasteraster = derive2 { name="fasteraster"; version="1.1.1"; sha256="1ycr2h046jds2758xvxn00rhglx3zarbzn3r38j66j5pnz2iiq4f"; depends=[Rcpp]; };
+  fastmaRching = derive2 { name="fastmaRching"; version="1.0.0"; sha256="17z5frf5c50y4387l4vbwwbm8z1wn0yyr7kp044s4q8bp1k2pqv3"; depends=[raster rgdal sp]; };
   fastmatch = derive2 { name="fastmatch"; version="1.1-0"; sha256="0z80jxkygmzn11sq0c2iz357s9bpki548lg926g85gldhfj1md90"; depends=[]; };
-  fastnet = derive2 { name="fastnet"; version="0.1.3"; sha256="06nxfwv85gm93bcgq53a6z929sqcij0adkg55g5y03hcm8v8v3aa"; depends=[doParallel foreach igraph]; };
+  fastnet = derive2 { name="fastnet"; version="0.1.4"; sha256="0hc18yc2cmvb5v8vjj1xvnciz35hyfp9iyqhkg9jfjrlf89icny6"; depends=[doParallel foreach igraph tidygraph]; };
   fastpseudo = derive2 { name="fastpseudo"; version="0.1"; sha256="0paag4pjh3gs270j663bsl65sfrq43gk2zzqmalr03fmcckp6aaj"; depends=[]; };
   fastqcr = derive2 { name="fastqcr"; version="0.1.0"; sha256="0hzlp66as7k0bh3biqkngacpkq1hi3y3gp6wg4c5476ywzm83gra"; depends=[dplyr ggplot2 gridExtra magrittr readr rmarkdown rvest scales tibble tidyr xml2]; };
-  fastrtext = derive2 { name="fastrtext"; version="0.2.3"; sha256="18k4inzjp5k1yk1hi2fmz34iskcjd6igq54i2cj4f5p84n6b1rbb"; depends=[assertthat Rcpp RcppThread]; };
+  fastrtext = derive2 { name="fastrtext"; version="0.2.5"; sha256="0zbd2sxzarxic90d2pkbn7fak5gyb81b180m91f784smb3sx1p1j"; depends=[assertthat Rcpp]; };
   fasttime = derive2 { name="fasttime"; version="1.0-2"; sha256="11i4c0zrkvvqsax0az1fvmc0jxfsjyx28434k1qgzhj9g2j9m9cf"; depends=[]; };
   fat2Lpoly = derive2 { name="fat2Lpoly"; version="1.2.2"; sha256="1xqr4azc5gsr7kcm8qzwjpjy72w1b111i61wbm35vns9r38a6cxz"; depends=[kinship2 multgee]; };
   fauxpas = derive2 { name="fauxpas"; version="0.1.0"; sha256="1mi19zrgkx25g8j1f948n0ps27dn0rr2jqnhf15w73lpsjbwvi54"; depends=[httpcode R6 whisker]; };
@@ -6059,17 +6189,17 @@ in with self; {
   fcuk = derive2 { name="fcuk"; version="0.1.21"; sha256="1sb7p1m5qb88028mrw95lhh8l7dxj696hjh88nfsdpnscryknfpv"; depends=[magrittr purrr stringdist tibble]; };
   fdANOVA = derive2 { name="fdANOVA"; version="0.1.0"; sha256="10c12yns1sv4ph61hma1mymab03xyyx933f27977lw3c0npy7b02"; depends=[doBy doParallel fda foreach ggplot2 magic MASS]; };
   fda = derive2 { name="fda"; version="2.4.7"; sha256="0371c32kxxvfdh18ldgc2p76dr2436ay0n9prdjwm9v0azp4rp9k"; depends=[Matrix]; };
-  fda_usc = derive2 { name="fda.usc"; version="1.3.0"; sha256="1ask7g6mqwx8r1hd9vxzdl96z0gyqprswjpfcl7l5l3611m7mzdm"; depends=[fda MASS mgcv nlme rpart]; };
+  fda_usc = derive2 { name="fda.usc"; version="1.4.0"; sha256="0gp19c5lxp0g4690vdr0gpw89rl9v3l6872mf7hr8nsyyd6776vn"; depends=[fda MASS mgcv nlme rpart]; };
   fdaMixed = derive2 { name="fdaMixed"; version="0.5"; sha256="1k2b3z2jj37j6njvxalg8640zlcvi1cm7wkcwp0pia21wydz75ip"; depends=[Formula Rcpp RcppArmadillo]; };
   fdaPDE = derive2 { name="fdaPDE"; version="0.1-4"; sha256="0n72x5h00n17yxjniim2qxz2phy1srk04dn6ivvc58k3x252fzkh"; depends=[RcppEigen rgl]; };
-  fdadensity = derive2 { name="fdadensity"; version="0.1.0"; sha256="18701asyyaglhmjbac9pi2xy7v8l2llcbzgrdsmr5jmiwazshqhz"; depends=[fdapace Rcpp]; };
+  fdadensity = derive2 { name="fdadensity"; version="0.1.1"; sha256="0jj5gprv3ihdjic261czqnv7c13mxsmjmv7gn2gv4483kgijlkz9"; depends=[fdapace Rcpp]; };
   fdakma = derive2 { name="fdakma"; version="1.2.1"; sha256="0j9qgblrl7v4586dd6v0hjicli6jh8pkk5lzn8afpl75xfs24six"; depends=[]; };
   fdapace = derive2 { name="fdapace"; version="0.3.0"; sha256="1r4s20spsiags7z8hyvbvi9gxjxs4v8hfnrqya872shagk9iadyl"; depends=[Hmisc Matrix numDeriv pracma Rcpp RcppEigen]; };
-  fdasrvf = derive2 { name="fdasrvf"; version="1.8.2"; sha256="10j2zh0jfxi46vf2cf9k561ff3qy6vhp1hj1q2zwvpbxaa1lyjb3"; depends=[coda doParallel fields foreach matrixcalc mvtnorm Rcpp RcppArmadillo viridisLite]; };
+  fdasrvf = derive2 { name="fdasrvf"; version="1.8.3"; sha256="1lqyadg17ddd3vksbaxc7bpwvk0afsd59rfg0n5wrgvhbd473s0y"; depends=[coda doParallel fields foreach matrixcalc mvtnorm Rcpp RcppArmadillo testthat viridisLite]; };
   fdatest = derive2 { name="fdatest"; version="2.1"; sha256="0zdnmssir5jz2kbfz4f4xshjfv4pivqx7cbh2arlx6ypkjrjws8n"; depends=[fda]; };
-  fdcov = derive2 { name="fdcov"; version="1.0.0"; sha256="1m6yk6ngsxrz5mywp3vqhfjpkskrzgdyvqw7j8k2jgy4l0x04g5g"; depends=[corrplot matlab]; };
+  fdcov = derive2 { name="fdcov"; version="1.1.0"; sha256="0savsgcifcjjqrmbpn6m30gncq5iigqxpb19l710wlx8nm98svjh"; depends=[corrplot matlab]; };
   fdq = derive2 { name="fdq"; version="0.2"; sha256="1iyplxm6niywfhmdnliy9nvvax1w6sijar8gpsj853cdfvn6kz5m"; depends=[data_table Fgmutils ggplot2 plyr randomcoloR sqldf]; };
-  fdrDiscreteNull = derive2 { name="fdrDiscreteNull"; version="1.2"; sha256="1x53hp5wixymasgnlh1vci0zavkhn1d7l3vi8lq1gzpzn5zjx2vi"; depends=[MCMCpack]; };
+  fdrDiscreteNull = derive2 { name="fdrDiscreteNull"; version="1.3"; sha256="17nzqy4i1c5kcqyps52827q5apyjn4znb1ql4qvfm8v2m1fvily3"; depends=[MCMCpack qvalue]; };
   fdrci = derive2 { name="fdrci"; version="2.1"; sha256="1sgrsmlz7sbr1maw3qnpzqz3z75fh5nyiibpsq8j0y12xac8d0x3"; depends=[]; };
   fdrtool = derive2 { name="fdrtool"; version="1.2.15"; sha256="1h46frlk7d9f4qx0bg6p55nrm9wwwz2sv6d1nz7061wdfsm69yb5"; depends=[]; };
   fds = derive2 { name="fds"; version="1.7"; sha256="164f2cbywph7kyn712lfq4d86v22j4y3fg5i9zyz956hipqv0qvw"; depends=[rainbow RCurl]; };
@@ -6097,26 +6227,30 @@ in with self; {
   fgof = derive2 { name="fgof"; version="0.2-1"; sha256="0bclkb3as0fl2gyggqxczndfyj9pfnni5pa3inpn5msrnjg4g2j2"; depends=[mvtnorm numDeriv]; };
   fgpt = derive2 { name="fgpt"; version="2.3"; sha256="1d0qzsn4b68jhk07k97iv765jpmzzh1gwqpid0r76vg4cwqfs3n7"; depends=[]; };
   fgui = derive2 { name="fgui"; version="1.0-5"; sha256="0gzwxzvf2y9p5rlfk862d7l1dm2sdwjhjpcb8p494cj4g1xshazg"; depends=[]; };
-  fields = derive2 { name="fields"; version="9.0"; sha256="0fjk1gcgmmra38f574smv2grk3vkd81gldic85liaws1nqvb0z4w"; depends=[maps spam]; };
+  fields = derive2 { name="fields"; version="9.6"; sha256="1v7z48a8jmdcil28rj8c3455k6rssr5v9qi6dyhhpbb193bj8121"; depends=[maps spam]; };
   fiery = derive2 { name="fiery"; version="1.1.0"; sha256="0251vfr7b8r4xjgcf8gyh1ddj0lj73fl0pim0k3vpzva5wmwigs1"; depends=[assertthat crayon desc future glue httpuv later R6 reqres stringi uuid]; };
   fifer = derive2 { name="fifer"; version="1.1"; sha256="1gcv8ns4c1y3pjmixdm16raa5h6jqmc3i4m37ahj97l720j1f2ya"; depends=[fields Hmisc MASS party plotrix randomForest randomForestSRC rpart xtable]; };
   fiftystater = derive2 { name="fiftystater"; version="1.0.1"; sha256="1nri9vsqif03xrmm3g5llasqm49hj169mgv046f2l0mh9vp0fqpc"; depends=[]; };
   filehash = derive2 { name="filehash"; version="2.4-1"; sha256="1x7an7rsy5pz2qr86m511rsv297vacxwk3y1a71754yq739qgq6h"; depends=[]; };
   filehashSQLite = derive2 { name="filehashSQLite"; version="0.2-4"; sha256="1higvkmj4wvnwpvayqinzaygiksij20d77dx118q0gffsczadamh"; depends=[DBI filehash RSQLite]; };
-  filematrix = derive2 { name="filematrix"; version="1.1.0"; sha256="1z1nlpmckmh96zfc17gkgagagzz84ih6sjy4b8vfv1nzfipprsfy"; depends=[RSQLite]; };
-  filenamer = derive2 { name="filenamer"; version="0.2.1"; sha256="0xahzjgwfpyln6i2szr985csw11w8wwk644sgclwly9l2yqzsi3i"; depends=[]; };
+  filelock = derive2 { name="filelock"; version="1.0.1"; sha256="11mmq296zg62gnxjk7dyr866kihihmsjpfg6bcc7hv6ivh4812nn"; depends=[]; };
+  filematrix = derive2 { name="filematrix"; version="1.2"; sha256="1n8gy1fh0af3b43y7c1139lxyjn75fi2pdsn3c5mm4iscfmarl0r"; depends=[]; };
+  filenamer = derive2 { name="filenamer"; version="0.2.2"; sha256="0289qpy4891fb71fa4bhc8wp4g7n1sw1kis5k5irdyyzmsa9dfhn"; depends=[]; };
   fileplyr = derive2 { name="fileplyr"; version="0.2.0"; sha256="15rxls0njd6j2vxdahf4fx2nxmsa3rc41812v3wlaqas99naaxxr"; depends=[assertthat datadr tibble]; };
   files = derive2 { name="files"; version="0.0.1"; sha256="1vhhawqjjbb6fadkn3l10mvz63w3vmcwvl93fk0q9mhkifzlj9kc"; depends=[]; };
-  filesstrings = derive2 { name="filesstrings"; version="1.1.0"; sha256="0nyrmc3lhr4dx5ga90mra3jchi6i64vvm68m503lxiiix9s8ii9s"; depends=[magrittr matrixStats ore Rcpp readr stringr tibble]; };
+  filesstrings = derive2 { name="filesstrings"; version="2.0.4"; sha256="14qx9jiqg7vs340ss4vlg5jgald7pl111bnvv8279bdgjilrd4yf"; depends=[checkmate magrittr matrixStats ore purrr Rcpp stringr tibble]; };
+  filling = derive2 { name="filling"; version="0.1.0"; sha256="0avlfl06nd8wn76ydii09ng2fqp92d4n9v2y5vg16m3my58l0srd"; depends=[CVXR nabor Rcpp RcppArmadillo Rdpack ROptSpace RSpectra]; };
   financial = derive2 { name="financial"; version="0.2"; sha256="1v6jgs3rq57byin5mynslfjk3zrx91qz36558nn17mv6z0qsf10v"; depends=[]; };
-  finch = derive2 { name="finch"; version="0.1.0"; sha256="0pqli6l049s9pdk0gphch1pw8i0f1fr3562akms1x7hvdkn9c0i9"; depends=[data_table digest EML plyr rappdirs xml2]; };
-  findpython = derive2 { name="findpython"; version="1.0.2"; sha256="1x38dbxr6yvxy2z2fvv00y263g66ljbzf3a8znl2fywj462i92xk"; depends=[]; };
+  finch = derive2 { name="finch"; version="0.2.0"; sha256="1vganbkz2d96xfz2jf1q0kqarc575w3nswss2igynsbbd0y53mjm"; depends=[data_table digest EML hoardr plyr rappdirs xml2]; };
+  findR = derive2 { name="findR"; version="0.2.0"; sha256="03xkp8akjaciv2cl1przzz56nc3ma8l7pr4k0c3w2y0sivkmawdk"; depends=[pdftools]; };
+  findpython = derive2 { name="findpython"; version="1.0.3"; sha256="1y08jk2ffmkf9zpwiz2xymjhfwqvls9vzsnq62v278ghw9d571jl"; depends=[]; };
   findviews = derive2 { name="findviews"; version="0.1.3"; sha256="1l1yhw5hvrn0rpkdsch8m69d2q5284jwccvv7r4ia4m0iqjfipj7"; depends=[ggplot2 gridExtra scales shiny]; };
-  fingerprint = derive2 { name="fingerprint"; version="3.5.6"; sha256="1qidi88i1wh0gpicklk0f0l4j3azwmh0crpwnandkjx4nk1pfxxs"; depends=[]; };
-  fingertipsR = derive2 { name="fingertipsR"; version="0.1.3"; sha256="192ns87gp7cgnfjdnnfmxlf30dq85dv29b964273bn21gq2kwwv3"; depends=[data_table dplyr DT httr jsonlite miniUI purrr readr shiny shinycssloaders]; };
+  fingerprint = derive2 { name="fingerprint"; version="3.5.7"; sha256="04jcwkydjrs31pia6kq8z2n9s54im950q08hs2ay15xjxxkmb8ic"; depends=[]; };
+  fingertipsR = derive2 { name="fingertipsR"; version="0.1.5"; sha256="0g1r2mrivnfv7icba1y9lx5h2a3swmd41ry2064n82l05iaw9wsp"; depends=[dplyr DT httr jsonlite miniUI purrr readr shiny shinycssloaders]; };
   finiteruinprob = derive2 { name="finiteruinprob"; version="0.6"; sha256="0z4l0crymh58chxniqq70fqmvi6f5jkgvz72vbc7s3l9lrrapgr3"; depends=[numDeriv sdprisk]; };
   finreportr = derive2 { name="finreportr"; version="1.0.1"; sha256="1mansiyl4p4zqc1h2aw9zgzb3fy4mppgmshdm8mcf4nbm340g4vk"; depends=[curl dplyr httr rvest XBRL xml2]; };
   fishMod = derive2 { name="fishMod"; version="0.29"; sha256="0pbs4z27vwa3c42xdw3mr6l2i581bgvn2pk52kawbcnnlsff92ar"; depends=[]; };
+  fishdata = derive2 { name="fishdata"; version="0.1.3"; sha256="04162m1j570cdwhffkwjs1x1qlsc20djj1jwx2hl2cqmbp584ppq"; depends=[]; };
   fisheyeR = derive2 { name="fisheyeR"; version="0.9"; sha256="1w6va7gakqq2q8hsvdszpn8s2ysdfc648bk5p5v3wbl5s403bci8"; depends=[tkrplot]; };
   fishkirkko2015 = derive2 { name="fishkirkko2015"; version="1.0.0"; sha256="1s8vsf604rc6qk0gahn61p3q8p9dhsbq14wsmrin7icq2xgl3y81"; depends=[]; };
   fishmethods = derive2 { name="fishmethods"; version="1.10-4"; sha256="1ir9r0bnp4klmm0i2iqqg03jd2qm19q885mqwpgcnl2mv8d45dwn"; depends=[boot bootstrap lme4 MASS numDeriv]; };
@@ -6129,8 +6263,9 @@ in with self; {
   fitdc = derive2 { name="fitdc"; version="0.0.1"; sha256="1b1abib7jkl7a6r686r53qjw2ywb9q2h67is8691kkaqxpawg30p"; depends=[]; };
   fitdistrplus = derive2 { name="fitdistrplus"; version="1.0-9"; sha256="18x9454g598d54763k3hvi33iszifk7sxvhd1zg5r8z1vpixx3z6"; depends=[MASS survival]; };
   fitplc = derive2 { name="fitplc"; version="1.1-7"; sha256="1dffgqsml6cj6ayqdpr0330kj8v57jwi3pgchb8v98rainygsyfw"; depends=[car nlme]; };
-  fitur = derive2 { name="fitur"; version="0.5.0"; sha256="1w6nq8n7wrpzpxx6miklqy1x3p9n57sag3wjc96ba9zhmj18aas5"; depends=[actuar e1071 fitdistrplus]; };
-  fivethirtyeight = derive2 { name="fivethirtyeight"; version="0.3.0"; sha256="0m70yxfp1aspf4g4v21pwhkapnzxjx8cg06w37z0i69gl4lmyq9j"; depends=[]; };
+  fitteR = derive2 { name="fitteR"; version="0.1.0"; sha256="1kgnyl7am966vkfap8gmvchlpankrcj5dv5aj7ws8ix9shr76db6"; depends=[dplyr DT maxLik R_utils shiny]; };
+  fitur = derive2 { name="fitur"; version="0.5.20"; sha256="1iv8vzbhjlv72rcby0n2615bi8jn1wykwlf7n0i85wqaw04di4lr"; depends=[actuar e1071 fitdistrplus ggplot2]; };
+  fivethirtyeight = derive2 { name="fivethirtyeight"; version="0.4.0"; sha256="1sdj5b365hi11dd2yxvg9w3fz3rx9rbv1nnhf5i8v2ydg4kqyrws"; depends=[]; };
   fixedTimeEvents = derive2 { name="fixedTimeEvents"; version="1.0"; sha256="0z7ji8yzp4pj76ad64l7ivknkbi82ijx6abd3a18wicqhrh433sj"; depends=[]; };
   fizzbuzzR = derive2 { name="fizzbuzzR"; version="0.1.1"; sha256="119gbi9y4n8r52hk9vj7zf795dv9xnk7lnngljjcd7ydnhygwd4h"; depends=[]; };
   flacco = derive2 { name="flacco"; version="1.7"; sha256="1w77smmbrwglayr2rj88b00x7wan9f3x1fq8h6xyhybfvrw7vr0r"; depends=[BBmisc checkmate mlr]; };
@@ -6142,19 +6277,21 @@ in with self; {
   flatr = derive2 { name="flatr"; version="0.1.1"; sha256="10l98a3f57wahfpdqxj70r25zfhk4vzzd014pdnriy458yrfd7rw"; depends=[dplyr magrittr tibble]; };
   flexCWM = derive2 { name="flexCWM"; version="1.7"; sha256="0kgvj3l4cscr1p3305mnz42km5i8280wrvxp317dif3pvq7iigi4"; depends=[ContaminatedMixt mclust numDeriv statmod]; };
   flexPM = derive2 { name="flexPM"; version="2.0"; sha256="0h3qs9w9pc2nc24q1diz7j3s93y40ijpmgq2l0xg9mzcgjz9kz8c"; depends=[survival]; };
-  flexclust = derive2 { name="flexclust"; version="1.3-4"; sha256="1x9gyg69kb3wn02w885kl6hcwpf2ki66gzfayvc83jisrwxvdfvv"; depends=[lattice modeltools]; };
-  flexdashboard = derive2 { name="flexdashboard"; version="0.5"; sha256="1dv1h32diff7174mxw2n3l2216crnyb6c38qbrramhj5w72zf3da"; depends=[htmltools htmlwidgets jsonlite knitr rmarkdown shiny]; };
+  flexclust = derive2 { name="flexclust"; version="1.3-5"; sha256="19ihdhmhaglccqpvrpc51367gkfafg4jdpabbk0j6mh2n16hi511"; depends=[lattice modeltools]; };
+  flexdashboard = derive2 { name="flexdashboard"; version="0.5.1"; sha256="0jb5wswbjr58g121nbvl93p73gxr8cx56kajgpiaw1fis6dsyfyz"; depends=[htmltools htmlwidgets jsonlite knitr rmarkdown shiny]; };
   flexmix = derive2 { name="flexmix"; version="2.3-14"; sha256="0sl4zxh1sb2sr5q7svjw9ihrm219jzn82yrc9d43q6r1b8bpyz43"; depends=[lattice modeltools nnet]; };
   flexrsurv = derive2 { name="flexrsurv"; version="1.4.1"; sha256="13jq7yk7rz2148wkf7dv28l79zwdf1gpfkd5khgacb8hl5kml3p0"; depends=[Epi formula_tools matrixcalc orthogonalsplinebasis survival]; };
   flexsurv = derive2 { name="flexsurv"; version="1.1"; sha256="1vj8zsfgq2rv6v7na4w7n7z3farc69qsavm7pnmnhkaylz61gq26"; depends=[deSolve mstate muhaz mvtnorm quadprog Rcpp survival]; };
   flexsurvcure = derive2 { name="flexsurvcure"; version="0.0.2"; sha256="1lhw2z8i4l822ncziwpw6hg0dzc244q60n7l5aahgdhcr0xgylhz"; depends=[flexsurv gtools survival]; };
-  flextable = derive2 { name="flextable"; version="0.3.0"; sha256="0pim9yw33v608c9vjvz0r4xw44v8wwncvnv5j6k5ppm9nmz2x51x"; depends=[gdtools htmltools htmlwidgets lazyeval magrittr officer purrr R6 stringr tibble]; };
+  flextable = derive2 { name="flextable"; version="0.4.2"; sha256="07a962ylr3y8v31557iqzr1m0c8bvprilfdimwzjl9fhlplb9y4h"; depends=[gdtools htmltools knitr officer R6 rmarkdown stringr]; };
   flifo = derive2 { name="flifo"; version="0.1.4"; sha256="1yilfnblarimc8mlvvwsgib5sxcfgvgsvgpyzddxb39g6fb7lffs"; depends=[bazar pryr]; };
   flip = derive2 { name="flip"; version="2.4.3"; sha256="04zf2gnk5w57gxnlnh26pn1ir1wfrzxhfhchr33ghk7prhc7k4b8"; depends=[cherry e1071 Rcpp RcppArmadillo someMTP]; };
   flippant = derive2 { name="flippant"; version="1.1.0"; sha256="06aj90y7c33c1q0nw1c67vr1pfmp9fw78az6ivrbq110f2k1m12w"; depends=[assertive_files assertive_numbers assertive_properties assertive_strings assertive_types data_table ggplot2 magrittr minpack_lm plyr RcppRoll stringi withr wmtsa]; };
+  flipscores = derive2 { name="flipscores"; version="0.1"; sha256="0jb9im2p3x20y356av749mni3cka2byhv7glz7qhdmsdryrdizh7"; depends=[]; };
+  float = derive2 { name="float"; version="0.1-1"; sha256="0bzwc48l4wijrxz3swrp720q9jsa74qwv6s8zpigbnjkspsqy3vi"; depends=[]; };
   flock = derive2 { name="flock"; version="0.7"; sha256="1zg93p74icj4bhxnmnssj2xp6vw4yaksyavq03497v33xfpdxss7"; depends=[Rcpp]; };
   flood = derive2 { name="flood"; version="0.1.1"; sha256="0nlmjh2l7dij1aqd70hhj0m550knlin3am14azqkx4pacs1kir3p"; depends=[copula evd magrittr TLMoments]; };
-  flora = derive2 { name="flora"; version="0.2.8"; sha256="1asggrfp7i6z9p7lp1ab9i9i6xzz0qafxs03irpqig4pqw0qwm7d"; depends=[dplyr httr jsonlite]; };
+  flora = derive2 { name="flora"; version="0.3.0"; sha256="1nsc2q6y02shpk70p44rr7nl7pnj6as7jgdyakxqs64imwais8x2"; depends=[dplyr httr jsonlite stringdist]; };
   flowDiv = derive2 { name="flowDiv"; version="2.0"; sha256="1p89l8q1i610bl1bvx6lmkygb094pvydgbmd8kx0640a11rblx8v"; depends=[flowCore flowWorkspace ggplot2 gridExtra vegan]; };
   flower = derive2 { name="flower"; version="1.0"; sha256="1h2fvpjrvpbyrqb8hd51sslr1ibpwa7h9fiqy9anvf2yim5j11yq"; depends=[]; };
   flowfield = derive2 { name="flowfield"; version="1.0"; sha256="1cx3i0w3xq781mmms4x20fshlf1i9bwxw9bxx562crix3fq3m50j"; depends=[]; };
@@ -6163,17 +6300,17 @@ in with self; {
   flsa = derive2 { name="flsa"; version="1.05"; sha256="07z2b1pnpnimgbzkjgjl2b074pl9mml7nac2p8qvdgv7aj070cmh"; depends=[]; };
   flux = derive2 { name="flux"; version="0.3-0"; sha256="0pc9cab2pwrfl0fnz29wp7a398r49hvbi50jp8i2fk2rfvck21a7"; depends=[caTools]; };
   fma = derive2 { name="fma"; version="2.3"; sha256="1z7shh9ng3q7ax22cwg86y79jzz5gbchdny2rppzzm0lkvvyy5pm"; depends=[forecast]; };
-  fmbasics = derive2 { name="fmbasics"; version="0.2.0"; sha256="0ni3gyacga9wwmqbgxjndxl6jv62m8r18wxb91by9plmqabb4yqs"; depends=[assertthat fmdates lubridate tibble]; };
-  fmdates = derive2 { name="fmdates"; version="0.1.3"; sha256="1v4gc38c3d7hhbj5h0dx3lyf90w4pb0w988y5nb0d8zl29gi6psz"; depends=[assertthat lubridate]; };
+  fmbasics = derive2 { name="fmbasics"; version="0.3.0"; sha256="1dnf09rgwpc7n7ydlp7r5cwy2fa4vh1h9mbjqzfhk0208kz6jpl0"; depends=[assertthat fmdates lubridate tibble]; };
+  fmdates = derive2 { name="fmdates"; version="0.1.4"; sha256="1bbcwkh65nf2gak9b81zgg32c5ihwhmai3nc43ayf6ivhqsxw8x0"; depends=[assertthat lubridate]; };
   fmri = derive2 { name="fmri"; version="1.7-2"; sha256="1ifp0fkmr0bj5vkg9vh0lk74f04fk0zc90vknmjmxd2hbdb5kh4r"; depends=[awsMethods metafor nlme]; };
-  fmriqa = derive2 { name="fmriqa"; version="0.1.0"; sha256="1d9whlrdml6ws6inilh3p60xqm26whychn94ys2bw8b01pwwlnqd"; depends=[ggplot2 gridExtra optparse pracma RcppEigen reshape2 RNifti tidyr viridisLite]; };
+  fmriqa = derive2 { name="fmriqa"; version="0.3.0"; sha256="1z09nf1c305a78c129jvs21b9z91wyhazz41wrn4bimmhfhx7szv"; depends=[ggplot2 gridExtra imager optparse pracma RcppEigen reshape2 RNifti tidyr viridisLite]; };
   fmrs = derive2 { name="fmrs"; version="1.0-9"; sha256="1x9g67701kcnz3p97iynr74sn0mfpxpp16mv1l4zxlhhfn2v5lwx"; depends=[survival]; };
   fmsb = derive2 { name="fmsb"; version="0.6.1"; sha256="1kdw0j1jl76dzsk56lpl5vvrx5l0w9rc94kmj1dhbqb5yh64xai7"; depends=[]; };
   fmt = derive2 { name="fmt"; version="1.0"; sha256="13gsywnyvf9zy5n644g2xyd60f92w2dp7vil2dncjvjcqsib22a0"; depends=[]; };
   foba = derive2 { name="foba"; version="0.1"; sha256="1af8whgl66v0vwzdf03b6141k3dysdc0svymlgifcga5gqkwzsl0"; depends=[]; };
   focusedMDS = derive2 { name="focusedMDS"; version="1.3.3"; sha256="18s86dbbpyajscqr9frprf2vp1zif7vh4lw5m0cjskfc6gmsdp2p"; depends=[htmlwidgets]; };
-  foghorn = derive2 { name="foghorn"; version="0.4.4"; sha256="19cabq0ffc03x2p9jjsnfh1bpkdlqa8lnf7qr6cvd3sczj4n1pdl"; depends=[clisymbols crayon curl dplyr httr lazyeval magrittr rvest tibble tidyr xml2]; };
-  fold = derive2 { name="fold"; version="0.2.2"; sha256="1zc9zzaf878khhldl5h7gg285y5izq408vaxxssygmr696w7xv21"; depends=[csv dplyr encode lazyeval rlang spec tidyr]; };
+  foghorn = derive2 { name="foghorn"; version="1.0.0"; sha256="0agnryzh3clcb0mz1nx6f9shkl6cx98v7mmbkj6mpk3xxilxa87n"; depends=[clisymbols crayon curl httr jsonlite rvest tibble xml2]; };
+  fold = derive2 { name="fold"; version="0.2.5"; sha256="1h7vx8saq4mbmylh1zgldm8n17i8waq8fgr5d4q68553xmazws41"; depends=[csv dplyr encode lattice lazyeval magrittr metaplot rlang spec tidyr]; };
   fontBitstreamVera = derive2 { name="fontBitstreamVera"; version="0.1.1"; sha256="0nipdlmhjv1wr3aidcl97nk6mppdkd65krgwqnhdsnv0jpfv761j"; depends=[]; };
   fontHind = derive2 { name="fontHind"; version="0.1.1"; sha256="0qz3bj8vdy6jayy84p3vyxfwqll4v4qlklwq9wl981ii2k7g0vxf"; depends=[extrafont ggplot2 hrbrthemes]; };
   fontLiberation = derive2 { name="fontLiberation"; version="0.1.0"; sha256="1w1rl0g4ayyp8lwppmz9yzj9cizg7i50g07216jkm1q5w0is9pmc"; depends=[]; };
@@ -6182,16 +6319,17 @@ in with self; {
   fontquiver = derive2 { name="fontquiver"; version="0.2.1"; sha256="0qv3i9hch7cygl9983s3w68wfh5qvym2jkm52pp06p6mq8a1i1wm"; depends=[fontBitstreamVera fontLiberation]; };
   foodweb = derive2 { name="foodweb"; version="1-0"; sha256="1zm2a87g9bkpz90j9lax28s5hq1w7ia28qqb6vnvr1d7a47g9zi9"; depends=[rgl]; };
   forams = derive2 { name="forams"; version="2.0-5"; sha256="1fh3m9896ksv1h7b027yb955bzyv70yafhqvn5crkzalzk3jpb0s"; depends=[vegan]; };
-  forcats = derive2 { name="forcats"; version="0.2.0"; sha256="1mvwkynvvgz2vi8dyz11x7xrp53kadjawjcja34hwk1d89qf7g5m"; depends=[magrittr tibble]; };
-  foreach = derive2 { name="foreach"; version="1.4.3"; sha256="10aqsd3rxz03s1qdb6gsb1cj89mj4vmh491zfpin4skj1xvkzw0y"; depends=[codetools iterators]; };
+  forcats = derive2 { name="forcats"; version="0.3.0"; sha256="0mxn1hng43zdjh1v8shd80hrszrqahcpaqxs1s1sif0qxh84d0cm"; depends=[magrittr rlang tibble]; };
+  foreach = derive2 { name="foreach"; version="1.4.4"; sha256="0j2yj0rn0d5nbzz9nq5rqqgnxhp9pbd92q4klsarl2xpsn8119y0"; depends=[codetools iterators]; };
   forecTheta = derive2 { name="forecTheta"; version="2.2"; sha256="1a7ip3czm8k82kb8dx95m8q47kjhifdj51gzavd1zj9ni3vwbhfn"; depends=[forecast tseries]; };
   forecast = derive2 { name="forecast"; version="8.2"; sha256="04mqx1szm22lhiqzncm8ad0kyqhv1y4d6v02gn70d78kxmjangzb"; depends=[colorspace fracdiff ggplot2 lmtest magrittr nnet Rcpp RcppArmadillo timeDate tseries zoo]; };
-  forecastHybrid = derive2 { name="forecastHybrid"; version="1.1.9"; sha256="03wkfzlg8pcpalakq5cgmhcy9p7ds4x0hqnhsiaja4zghrqbj5b6"; depends=[doParallel foreach forecast ggplot2 reshape2 zoo]; };
+  forecastHybrid = derive2 { name="forecastHybrid"; version="2.0.10"; sha256="04lspngh44y815amxlnhl74k5g7sj3bm0w8yy58fk8nqrl382pb6"; depends=[doParallel foreach forecast ggplot2 reshape2 zoo]; };
   forecastSNSTS = derive2 { name="forecastSNSTS"; version="1.2-0"; sha256="1rnf2a7sri52sm976iicab660qk07pmz8jmd3q71dg4hmc30yf9j"; depends=[Rcpp]; };
   forega = derive2 { name="forega"; version="1.0.3"; sha256="1n1gqm0bjdw13jm95zp0ni0hps07xjkswzrszvamn2f6sglrn73d"; depends=[forecast Rcpp robfilter]; };
   foreign = derive2 { name="foreign"; version="0.8-69"; sha256="0s1lxmd85dd0kxx8hwk02w9l7pmpk4bpy7787fbyh2dbq5g9ys0k"; depends=[]; };
   forensic = derive2 { name="forensic"; version="0.2"; sha256="0kn8wn6p3fm67w88fbarg467vfnb42pc2cdgibs0vlgzw8l2dmig"; depends=[combinat genetics]; };
   forensim = derive2 { name="forensim"; version="4.3"; sha256="1jhlv9jv832qxxw39zsfgsf4gbkpyvywg11djldlr9vav7dlh3iw"; depends=[tcltk2 tkrplot]; };
+  forestControl = derive2 { name="forestControl"; version="0.1.1"; sha256="0qfj4qf0d1bb1wllhpg9r8gvg353zdqv7py9a3hm33yhs3l5x0g5"; depends=[Rcpp]; };
   forestFloor = derive2 { name="forestFloor"; version="1.11.1"; sha256="1sslxq44qmmmdhr7800bz8lj9w2l7f7x1vly3w2z7j1qdijc7nw7"; depends=[kknn randomForest Rcpp rgl]; };
   forestinventory = derive2 { name="forestinventory"; version="0.3.1"; sha256="0brbg0q8j9ymvm527db7063kgs6i6flja7mxqk7yvaf3dh8wsi46"; depends=[ggplot2 plyr tidyr]; };
   forestmodel = derive2 { name="forestmodel"; version="0.4.3"; sha256="1v1m8dvird2r1jqig492msqpp9sb4s79bhgnrs9y2c0ba46jzykh"; depends=[broom dplyr ggplot2 lazyeval]; };
@@ -6199,6 +6337,7 @@ in with self; {
   formatR = derive2 { name="formatR"; version="1.5"; sha256="19sd23vgs4ac0fwlw40j3676k6mramb0ajlq8hdw23kjwdx1jk47"; depends=[]; };
   formattable = derive2 { name="formattable"; version="0.2.0.1"; sha256="1s7jjgm0j24vdwm39933ygh6xnxcfvzy4kl2mmfgas4czfcmd4rf"; depends=[htmltools htmlwidgets knitr rmarkdown]; };
   formula_tools = derive2 { name="formula.tools"; version="1.6.8"; sha256="10j7cgzdfkpqnxy9jpw5yd1bwrz55yi8b1zn144wwqb779l2c5yn"; depends=[operator_tools]; };
+  formulize = derive2 { name="formulize"; version="0.1.0"; sha256="1fz8q48z4zvfglxzmmjznb7lcfrrfqmnws85jfkihs3ff43h7ccc"; depends=[recipes rlang]; };
   fortunes = derive2 { name="fortunes"; version="1.5-4"; sha256="109ly9kpfn6hy294ava8795wy5z9l1bnl98hhhv8kn9naf4camdg"; depends=[]; };
   forward = derive2 { name="forward"; version="1.0.3"; sha256="0swn5ysp3f660kl9jpmkck9324j1g3yhj2hl238rfrcr5wihxifc"; depends=[MASS]; };
   forwards = derive2 { name="forwards"; version="0.1.0"; sha256="0pb101gdf2a4plalhhm34aixkss3lzfg8yj6yfi0d6khjmaza33i"; depends=[]; };
@@ -6207,7 +6346,7 @@ in with self; {
   fourierin = derive2 { name="fourierin"; version="0.2.2"; sha256="0hy033bzybdc214z10wnbqph5f83fsr13admnzwb1d2drpbljnc8"; depends=[Rcpp RcppArmadillo]; };
   fpCompare = derive2 { name="fpCompare"; version="0.2.1"; sha256="0vva60xixlx6l8623qvj2sdn5w3gjscrv5g8hqmgir4f211lzg38"; depends=[]; };
   fpa = derive2 { name="fpa"; version="1.0"; sha256="0kgpl9qq0l10h0vdd2f8vnir0kdylh1jvvv5z4d9ygj1pl9qywhk"; depends=[fields reshape]; };
-  fpc = derive2 { name="fpc"; version="2.1-10"; sha256="15m0p9l9w2v7sl0cnzyg81i2fmx3hrhvr3371544mwn3fpsca5sx"; depends=[class cluster diptest flexmix kernlab MASS mclust mvtnorm prabclus robustbase trimcluster]; };
+  fpc = derive2 { name="fpc"; version="2.1-11"; sha256="04alsqb5gbhsjg1000d8w52pmpnlwca29r0s12f7n7mdccdv6xar"; depends=[class cluster diptest flexmix kernlab MASS mclust mvtnorm prabclus robustbase trimcluster]; };
   fpca = derive2 { name="fpca"; version="0.2-1"; sha256="13b102026xlfb7c2rb3xsqsymm7xpmaxppaafjkb5dx0b1lz0jrc"; depends=[sm]; };
   fpest = derive2 { name="fpest"; version="0.1.1"; sha256="013r8295spm02j558aqvnrnbkg2g73gl5vi4lqzngbw8yr8qlkri"; depends=[]; };
   fpmoutliers = derive2 { name="fpmoutliers"; version="0.1.0"; sha256="108bp3smk9jnckd5237xly4ywmal03rq1kidq5z61l6zrhc3yfh9"; depends=[arules doParallel foreach Matrix pmml pryr R_utils XML]; };
@@ -6217,13 +6356,13 @@ in with self; {
   fptdApprox = derive2 { name="fptdApprox"; version="2.1"; sha256="00vxwcwca7zfm4fr0x9898snr6j0474ci1bahjmpj2jxiclwnhzs"; depends=[]; };
   fracdiff = derive2 { name="fracdiff"; version="1.4-2"; sha256="03l5dqpqwwi5c8fwc2vissfawcsignai60h2zalknkibvk782dwq"; depends=[]; };
   fracprolif = derive2 { name="fracprolif"; version="1.0.6"; sha256="1cpb71yk1245j6qz4mqvpqc3s3lrmav4blp5wlxasjizn3ilwh66"; depends=[emg numDeriv]; };
-  fractal = derive2 { name="fractal"; version="2.0-1"; sha256="1varigsw5chwz88dgipdg55fqfarvll3s7kcyqmhfm0wc7vvmz2q"; depends=[ifultools MASS sapa scatterplot3d splus2R wmtsa]; };
+  fractal = derive2 { name="fractal"; version="2.0-4"; sha256="18lr9z0gslvfc3z8vyj3krqj3bfhg60zv1fzinrwwkc4cpk1w7mp"; depends=[ifultools MASS sapa scatterplot3d splus2R wmtsa]; };
   fractaldim = derive2 { name="fractaldim"; version="0.8-4"; sha256="0fln4qn0d79agnnlzi8b9g9qn90zynq1cg9v5isiyi71345v45nr"; depends=[abind]; };
   fractalrock = derive2 { name="fractalrock"; version="1.1.0"; sha256="15f4w8hq3d8khgq269669ri16qxhar9646w40cw7wzh79r9gpf00"; depends=[futile_any futile_logger quantmod timeDate]; };
   fractional = derive2 { name="fractional"; version="0.1.3"; sha256="1jz83y53s0xdphh1z3v3z7xhcmhx7rp0iiazw2vdsx2747r3rirn"; depends=[Rcpp]; };
   fragilityindex = derive2 { name="fragilityindex"; version="0.1.0"; sha256="06f7w0ff8mmydgylz5a0z29fc78spvmay3sjq0rz9k44w4bb9z3q"; depends=[pbapply stringr survival]; };
-  frailtyEM = derive2 { name="frailtyEM"; version="0.7.9"; sha256="1bgsp4jkwl03c2ddvhc7xx8lzr22gw81fk58z0lfxknsgvajb9sp"; depends=[expint ggplot2 magrittr msm Rcpp survival tibble]; };
-  frailtyHL = derive2 { name="frailtyHL"; version="1.1"; sha256="1xjdph0ixanf9w4b6hx6igfhkcp8h93sclrg0pgqgmbvm41lhb1x"; depends=[Matrix numDeriv survival]; };
+  frailtyEM = derive2 { name="frailtyEM"; version="0.8.3"; sha256="02nsq5zjxg1hg578jn6ihygvyzscisx8r0s14a51dq1v6cjrz402"; depends=[expint ggplot2 magrittr Matrix msm Rcpp survival tibble]; };
+  frailtyHL = derive2 { name="frailtyHL"; version="2.1"; sha256="02vk1hwjpdwdajy527q034dpvnchsnwhqqlf6nq19wqhxq7355qj"; depends=[cmprsk Matrix numDeriv survival]; };
   frailtySurv = derive2 { name="frailtySurv"; version="1.3.2"; sha256="0qsq96p29rxlfkhbmg8cfqdnpzh8wq2nadpiim9d6l0bs20r51gl"; depends=[ggplot2 nleqslv numDeriv Rcpp reshape2 survival]; };
   frailtypack = derive2 { name="frailtypack"; version="2.12.6"; sha256="0w2v5ik4ryvl5hph9cwxcrrglwpqbyirfrayyw9g0l1wdc1mfvi4"; depends=[boot MASS nlme statmod survC1 survival]; };
   frair = derive2 { name="frair"; version="0.5.100"; sha256="1j557dqvc5xiz7xbl4h7vp55pc3hly8ci01qy36p02vlxhzf4hj3"; depends=[bbmle boot lamW]; };
@@ -6238,7 +6377,7 @@ in with self; {
   freqdom_fda = derive2 { name="freqdom.fda"; version="0.9.1"; sha256="15wq9s3v441dybc8kglpbv9hdvsr9rjjq4qp4d2ipxglfp0iqj9p"; depends=[fda freqdom mvtnorm]; };
   freqparcoord = derive2 { name="freqparcoord"; version="1.0.1"; sha256="011p8xh0i0x0w5rv5qz5a7fxwdhxd8l2bqi9bxv5almxd0y7ajqx"; depends=[FNN GGally ggplot2 mvtnorm]; };
   frequencies = derive2 { name="frequencies"; version="0.1.1"; sha256="0d52kf4r13n59990xhra9i6gfvs4sn7ix54d0c0g56p1rj7hnh79"; depends=[dplyr]; };
-  frequencyConnectedness = derive2 { name="frequencyConnectedness"; version="0.1.6"; sha256="06lqy1w3j0k3wddazk9a8pj076sjpr986756cx2z11s6a9j4pkfx"; depends=[urca vars]; };
+  frequencyConnectedness = derive2 { name="frequencyConnectedness"; version="0.2.0"; sha256="02ha5jfkjaxyfp7x1h0xx32ijha2dh7h52z687a9y9azrqvjv0jp"; depends=[knitr pbapply urca vars]; };
   freqweights = derive2 { name="freqweights"; version="1.0.4"; sha256="1iy2vzv4wc2883yq8r31wpspa7gm7cd4wkgvbh7mwafll463zni2"; depends=[biglm data_table dplyr FactoMineR fastcluster plyr]; };
   frm = derive2 { name="frm"; version="1.2.2"; sha256="1dl0vca9r2dams99sc13pfpi0b3yb02x59f4c1jz07zz005c8l23"; depends=[]; };
   frmhet = derive2 { name="frmhet"; version="1.1.3"; sha256="07sgsfhzrci8g1b0gicjfca1mgd8ppfqpkpp4q9bdxnjvdvlf45s"; depends=[]; };
@@ -6248,11 +6387,13 @@ in with self; {
   frontier = derive2 { name="frontier"; version="1.1-2"; sha256="1vpjd57cc6niwqibhz1ib46zj57d5a9m40yaq7kr9awk9di65ryz"; depends=[Formula lmtest micEcon miscTools moments plm]; };
   frontiles = derive2 { name="frontiles"; version="1.2"; sha256="08qq25wbylvhvmq34wggyj0hwdlxfs9rfs8gjqsrg50xccchniqi"; depends=[classInt colorspace rgl sp]; };
   frt = derive2 { name="frt"; version="0.1"; sha256="1qy76a1wkznaqzlyj1nq74mf1pnyly1s8gnff8q30zfccqk68cxv"; depends=[]; };
-  fscaret = derive2 { name="fscaret"; version="0.9.4.1"; sha256="19g0vcgbq3l9b9x264jg5q17lrky7xrznc8wjxkvnjqdykjmzjhp"; depends=[caret gsubfn hmeasure]; };
+  fs = derive2 { name="fs"; version="1.1.0"; sha256="1rcpji6qygjm75y51gb6x0vg0fjnvkl3x734d6dgd50xal59blb9"; depends=[Rcpp]; };
+  fscaret = derive2 { name="fscaret"; version="0.9.4.2"; sha256="08lrkxkfraw67dhcpg53dg1w7lpxzpqhz0l71vpn21xlk8iqgjw8"; depends=[caret gsubfn hmeasure]; };
+  fsdaR = derive2 { name="fsdaR"; version="0.2-21"; sha256="121khfqy1ixqp86cl3cngc40zxjpd4nm5k0lk558nxcfgyyzvx8y"; depends=[rJava robustbase]; };
   fsia = derive2 { name="fsia"; version="1.1.1"; sha256="0id7cnswrqylgpwjil1zfn89ryrdpl20fim8x1srl8s1hm5bg35r"; depends=[]; };
-  fslr = derive2 { name="fslr"; version="2.12"; sha256="1ivjza08qxa8dfgyvcikrggivzd1kb2anqj907hj5g8rsqfjdrrs"; depends=[matrixStats neurobase oro_nifti R_utils]; };
+  fslr = derive2 { name="fslr"; version="2.17.3"; sha256="1g7z1jsj89kqyclb3qdc7c6dgn18jqjmrxpxi62llkixhqg21yha"; depends=[matrixStats neurobase oro_nifti R_utils]; };
   fso = derive2 { name="fso"; version="2.0-1"; sha256="02dr12bssiwn8s1aa1941hfpa4007gd65f3l4s74gs2vgjzdxf8s"; depends=[labdsv rgl]; };
-  fst = derive2 { name="fst"; version="0.7.2"; sha256="1y2yzx8bwn747vibi0dds1m1rwyy588nppvbgp4bars1w3h4pps5"; depends=[data_table Rcpp]; };
+  fst = derive2 { name="fst"; version="0.8.4"; sha256="1jarhz5c6bib4n3xms1xhgybzaqdf4llfbgmnqndz2gwxjx1igia"; depends=[Rcpp]; };
   fsthet = derive2 { name="fsthet"; version="1.0.0"; sha256="10mimnlq01q0mmaljfp27iq0pv11znbcv3mah57nrwpy0a3zqwhb"; depends=[]; };
   ftDK = derive2 { name="ftDK"; version="1.0"; sha256="1xs2rr2afjza97kpym5zkas3k78pilxjlh7lp1gc66banldr71g2"; depends=[dplyr httr pbapply purrr tibble]; };
   ftnonpar = derive2 { name="ftnonpar"; version="0.1-88"; sha256="0df9zxwjpfc939ccnm1iipwhpf76b34v0x74nsi1mm1g927dfl0i"; depends=[]; };
@@ -6262,22 +6403,23 @@ in with self; {
   fueleconomy = derive2 { name="fueleconomy"; version="0.1"; sha256="1svy5naqfwdvmz98l80j38v06563vknajisnk596yq5rwapl71vj"; depends=[]; };
   fugeR = derive2 { name="fugeR"; version="0.1.2"; sha256="0kd90s91vzv0g3v9ii733h10d8y6i05lk21p5npb3csizqbdx94l"; depends=[Rcpp snowfall]; };
   fullfact = derive2 { name="fullfact"; version="1.2"; sha256="13729m2s8b32d9i9c6g2r0zkcqsw9p7nhdig8isarfn4bjzqhf71"; depends=[afex lme4]; };
-  fulltext = derive2 { name="fulltext"; version="0.1.8"; sha256="14gvhjc9433hnb5dh88svxyahbcv968njxjfwgc5ii9lpcpw5935"; depends=[aRxiv digest httr jsonlite magrittr R_cache rcrossref rentrez rplos rredis tm whisker xml2]; };
+  fulltext = derive2 { name="fulltext"; version="1.0.1"; sha256="08pwasz1rpnnq81mvaldjiqv79wbvw5ma89skk95h0k2pbahblka"; depends=[aRxiv crminer crul data_table hoardr httr jsonlite magrittr microdemic pdftools rcrossref rentrez rplos storr tibble whisker xml2]; };
   fun = derive2 { name="fun"; version="0.1-0"; sha256="0z4nq2w1wz1clc7cf87pf870hayxq5mpzhllfgwj4mmh2xpphnrf"; depends=[]; };
   funData = derive2 { name="funData"; version="1.1"; sha256="0qr3rwa4z6173px9wqb17wcdfsnjgfqvfwwpzi8sldgmvq3l7dfg"; depends=[abind fields foreach]; };
   funFEM = derive2 { name="funFEM"; version="1.1"; sha256="08798lvryykrxfvp2297anzl4gi81gwvc1qyyzq16nafjf65kwfy"; depends=[elasticnet fda MASS]; };
   funHDDC = derive2 { name="funHDDC"; version="1.0"; sha256="038m64yv27wz7ki2gcn94q011p8mv0ggmli5n27y0f5bnkfh6d6w"; depends=[fda]; };
-  funModeling = derive2 { name="funModeling"; version="1.6.5"; sha256="0vmkfn2nv6iynadmlv37wxcyazfknjxzk485hl12a7d9rj2nhqfd"; depends=[dplyr ggplot2 gridExtra Hmisc lazyeval moments pander RColorBrewer reshape2 ROCR scales]; };
+  funModeling = derive2 { name="funModeling"; version="1.6.7"; sha256="0blanw0aw7qvcs6a8ryaqvi322gaz65g6flijkbssf681im9pmjr"; depends=[dplyr entropy ggplot2 gridExtra Hmisc lazyeval moments pander RColorBrewer reshape2 ROCR scales]; };
+  funbarRF = derive2 { name="funbarRF"; version="1.0.1"; sha256="05smi717j4zhbrfqjyvx1rzckygigg1x8c6kb3brbpv8w33gcvx7"; depends=[BioSeqClass Biostrings bold randomForest]; };
   funchir = derive2 { name="funchir"; version="0.1.4"; sha256="1mbsy65628q117c2k01wvibpjd3ibigy4yc1c8m0rf9jwsc67qjb"; depends=[data_table]; };
   functional = derive2 { name="functional"; version="0.6"; sha256="120qq9apg6bf39n9vnp68db5rdhwvnj2vi12a8j8243vq8kqxdqr"; depends=[]; };
   functools = derive2 { name="functools"; version="0.2.0"; sha256="0g62jdia3n09vq8mx1m2r4nl3jfcadzpym0wkldzzzjcfs90vl6b"; depends=[]; };
   funcy = derive2 { name="funcy"; version="0.8.6"; sha256="0wlcwwmv92djj35i7nnfns5l79fca6hsfrjxgsqmwgjb28gy19bs"; depends=[calibrate car caTools cluster fda fields flexclust kernlab MASS Matrix plyr sm wavethresh]; };
   fungible = derive2 { name="fungible"; version="1.5"; sha256="1f4q26rfl7d35ng5nx11mzzv9fhk4zg62j63c59i649wcx1xsan9"; depends=[e1071 lattice MASS mvtnorm nleqslv R2Cuba stringr]; };
   funr = derive2 { name="funr"; version="0.3.2"; sha256="11mjd1ba9kwawh7k5py54mkq4g1df79d7qivan8fj11qfwfzm679"; depends=[]; };
-  funrar = derive2 { name="funrar"; version="1.2.0"; sha256="0dsp3aldvnc7lkp6sl89p0i7yga7wvjvl77zkjgjhxwpr8a2ry22"; depends=[cluster dplyr]; };
+  funrar = derive2 { name="funrar"; version="1.2.1"; sha256="0zhrn0s75p4fnjwn2779avhlzg5y3in2il2s1qaaiq3mj368vpmn"; depends=[cluster dplyr]; };
   funreg = derive2 { name="funreg"; version="1.2"; sha256="199zvqali0sb0z4yp20rm5da0kd7z3rgv47g1cb1apsbcw0cq51n"; depends=[MASS mgcv mvtnorm]; };
-  funtimes = derive2 { name="funtimes"; version="4.0"; sha256="0a0xpybalk38p3n0fd5f3g4yav99j6ck03d1pkx0w2yqqxnviqhw"; depends=[dbscan Jmisc Kendall]; };
-  furniture = derive2 { name="furniture"; version="1.7.2"; sha256="07kbfjipx5cg4fxb7qqbg9i2rv81x5rg1zisqb7cy36dkh4svv51"; depends=[knitr]; };
+  funtimes = derive2 { name="funtimes"; version="5.0"; sha256="0xq0n3939rsrz7dna4d3d7mrpxad2xswnblsc4a88nbq6cmx5c70"; depends=[dbscan Jmisc Kendall]; };
+  furniture = derive2 { name="furniture"; version="1.7.3"; sha256="1bayp2cfd3vacy83jf9x5l2kp4dr2kvfx9zvmw7z2z03lfmjj841"; depends=[knitr]; };
   fuser = derive2 { name="fuser"; version="1.0.0"; sha256="0l2ddc3lal3gvzkn8b09i7pzd9nvqnr45naz3ni52nmgygwdk5ma"; depends=[glmnet irlba Matrix Rcpp RcppEigen RSpectra]; };
   fusionclust = derive2 { name="fusionclust"; version="1.0.0"; sha256="1h03nlk4gnz4j5h2h5bxazkka2qq983h7nglm1ghzqvbqjk6sv37"; depends=[bbmle]; };
   futile_any = derive2 { name="futile.any"; version="1.3.2"; sha256="09z12dlj7cnkfwnmgsjknsghirv1cry83w4a9k4d0w5a1jnlr5jg"; depends=[lambda_r]; };
@@ -6286,16 +6428,18 @@ in with self; {
   futile_options = derive2 { name="futile.options"; version="1.0.0"; sha256="1hp82h6xqq5cck67h7lpf22n3j7mg3v1mla5y5ivnzrrb7iyr17f"; depends=[]; };
   futile_paradigm = derive2 { name="futile.paradigm"; version="2.0.4"; sha256="14xsp1mgwhsawwmswqq81bv6jfz2z6ilr6pmnkx8cblyrl2nwh0v"; depends=[futile_options RUnit]; };
   futility = derive2 { name="futility"; version="0.2"; sha256="0njckhwmawqhiznv241yjghh99wl72c4xknp9nzbmvi5j575rnlh"; depends=[]; };
-  future = derive2 { name="future"; version="1.6.2"; sha256="01dg2rk9vdsd1mihljghwspisv6f15mv9gc0q52gykpx8qvniqi1"; depends=[digest globals listenv]; };
+  future = derive2 { name="future"; version="1.7.0"; sha256="0lfzw53z1d4bksishjkmwphfkgdr6zpvnpwr1jx8dsj0b1y2laiq"; depends=[digest globals listenv]; };
   future_BatchJobs = derive2 { name="future.BatchJobs"; version="0.15.0"; sha256="0r1bnp9mnv8jk9d6dpr94cqn4zihpm7cgxqj0c3l0x9b6i0ny3z2"; depends=[BatchJobs future R_utils]; };
+  future_apply = derive2 { name="future.apply"; version="0.1.0"; sha256="1c5jyklam5j9lmr5jmn6972wwlbyaaihy4kczxib87glmc4g0a4k"; depends=[future globals]; };
   future_batchtools = derive2 { name="future.batchtools"; version="0.6.0"; sha256="0npvy8d927k3ilmnwcq1fh5lvpdr009pyc93ils5qhwhfma3wfh0"; depends=[batchtools future]; };
+  future_callr = derive2 { name="future.callr"; version="0.2.0"; sha256="0b6f7iwx3pa6fdvb9zrzmx7ak94bgmscswyvinaysjxxcyfkmym2"; depends=[callr future]; };
   futureheatwaves = derive2 { name="futureheatwaves"; version="1.0.3"; sha256="122b2z86bzxfch67y6cpq8wj62mw0dgkzbmnpwi247kdx7w5mw1f"; depends=[data_table dplyr ggplot2 ggthemes leaflet Rcpp stringr tidyr]; };
   fuzzr = derive2 { name="fuzzr"; version="0.2.1"; sha256="10f9qd7cn0sqk02b5p1iq9prf5kjdivn0fkky4lb7chqvk2cwbv5"; depends=[assertthat progress purrr]; };
   fuzzyFDR = derive2 { name="fuzzyFDR"; version="1.0"; sha256="0zd8i9did0d9gp42xjmwrccm32glabvvy08kl8phhwb1yaq53h7w"; depends=[]; };
   fuzzyRankTests = derive2 { name="fuzzyRankTests"; version="0.3-10"; sha256="1xj5xsm2s4ylv3b8v80qny201iddjym07h8d50asas7xy1k7945z"; depends=[]; };
-  fuzzyforest = derive2 { name="fuzzyforest"; version="1.0.4"; sha256="1fxspavvr0d7pisba76y0rvr6dkgvfjlypc9cq76qqlylgvzz5wn"; depends=[doParallel doRNG foreach ggplot2 mvtnorm randomForest]; };
+  fuzzyforest = derive2 { name="fuzzyforest"; version="1.0.5"; sha256="1ifhvdzn0rs8gxqmpz8w1prxg3pxs5jqx5lh0r4i5rai49qjy3sb"; depends=[doParallel doRNG foreach ggplot2 mvtnorm randomForest]; };
   fuzzyjoin = derive2 { name="fuzzyjoin"; version="0.1.3"; sha256="16l2vwx5yxwbm7lhb4a1ypgx8kl2rrdc02qkh59lblhzya1jiid8"; depends=[dplyr geosphere purrr stringdist stringr tidyr]; };
-  fuzzywuzzyR = derive2 { name="fuzzywuzzyR"; version="1.0.1"; sha256="1w4cr41w876wf6jb413axlk147jpgjc1mjvpghbkmq4kaplwjcr0"; depends=[R6 reticulate]; };
+  fuzzywuzzyR = derive2 { name="fuzzywuzzyR"; version="1.0.2"; sha256="08pgyyihc1m4myl10l07vw45lisw36aaypyh5fv9zzm3lw6w6w36"; depends=[R6 reticulate]; };
   fwdmsa = derive2 { name="fwdmsa"; version="0.2"; sha256="0p0kh8am6gajfaixkvq61f12hfbm6chl9372yzn1yilhiyvqdxgp"; depends=[]; };
   fwi_fbp = derive2 { name="fwi.fbp"; version="1.7"; sha256="1wk9cr0kk6zkbf111bv87n7b1wwx1qrsbjxydvbjvy8bgz0nfa62"; depends=[]; };
   fwsim = derive2 { name="fwsim"; version="0.3.3"; sha256="1ix4sl2krlr0b0wfgvy73qhpmkjymqcci3q3v60j20zapi55gxn2"; depends=[Rcpp]; };
@@ -6304,28 +6448,27 @@ in with self; {
   g2f = derive2 { name="g2f"; version="0.1"; sha256="1njx03hnfvzqyzhyjg5zwikv36xggss2vc82vpfybg6rqkx3rqbd"; depends=[KEGGREST minval sybil]; };
   gCat = derive2 { name="gCat"; version="0.1"; sha256="10990ilsjk52kqkcdngj4nq0kcbn4w1syxl1mqjq2n5g1l002yjy"; depends=[]; };
   gIPFrm = derive2 { name="gIPFrm"; version="3.1"; sha256="08rfdac442picbw1r3xyxjzf2dc57svg44am0714z4r72mshvj04"; depends=[]; };
-  gLRTH = derive2 { name="gLRTH"; version="0.1.0"; sha256="0a4vcfb54sqbk43gp397dwc02701wzsf4sxq2r121m2amad79nl5"; depends=[]; };
-  gMCP = derive2 { name="gMCP"; version="0.8-11"; sha256="1zq8qwp6ib0gqvds4s7kb55xqgd562r8bh66r5x22j20brz41k2v"; depends=[CommonJavaJars JavaGD MASS Matrix multcomp mvtnorm PolynomF rJava xlsxjars]; };
+  gLRTH = derive2 { name="gLRTH"; version="0.2.0"; sha256="1drmmr576n3pbr0q1cnnx4k7r4iz061n2cizv1kpr3wcc1g291pn"; depends=[]; };
+  gMCP = derive2 { name="gMCP"; version="0.8-13"; sha256="19chbcqiw13rppp7s7y8vf42spwnna78xl2mb37n96s23fpj3qpf"; depends=[CommonJavaJars JavaGD MASS Matrix multcomp mvtnorm PolynomF rJava xlsxjars]; };
   gMOIP = derive2 { name="gMOIP"; version="1.1.0"; sha256="122yzwicsq7q98x5dxk1mmf148v2w64jz3pd3535himx85gy9zy3"; depends=[ggplot2 ggrepel]; };
   gMWT = derive2 { name="gMWT"; version="1.1"; sha256="1ws96x3vjswh6m6s9zn3r9gp7xp6ybdkkxsq9a73ng2zqz2qjdl0"; depends=[clinfun Rcpp RcppArmadillo]; };
   gPCA = derive2 { name="gPCA"; version="1.0"; sha256="1ylb1d24dxnzpws9bbanwhyizjr3ljky2bhrph4c5yaq0zwwbrkw"; depends=[]; };
   gPdtest = derive2 { name="gPdtest"; version="0.4"; sha256="00dlhnklfg2yp4hp7yjgr2nfswv22c007xq1mxdbkll62zgd94mq"; depends=[]; };
-  gProfileR = derive2 { name="gProfileR"; version="0.6.1"; sha256="1qix15d0wa9nspdclcawml94mng4qmr2jciv7d24py315wfsvv8p"; depends=[plyr RCurl]; };
+  gProfileR = derive2 { name="gProfileR"; version="0.6.4"; sha256="1cka02zbz1rbppm782qpxk1xn9qxbrv2gp5rgf970j906hxm2y0b"; depends=[plyr RCurl]; };
   gRain = derive2 { name="gRain"; version="1.3-0"; sha256="0xb746pyh8k8w1a8nz7z41bflx5xr0cqdq5l5wj7j464zv2cw6jy"; depends=[functional graph gRbase igraph magrittr Rcpp RcppArmadillo RcppEigen]; };
-  gRapHD = derive2 { name="gRapHD"; version="0.2.4"; sha256="0fxd04s6zh23chks4k6nwb5w408xjy89b44pa42kv6qnqj86ylvm"; depends=[graph]; };
   gRapfa = derive2 { name="gRapfa"; version="1.0"; sha256="07yzwzna9pdyzndxk6wwyl6v3gkfc7dvy1ixmdl3d38mcl1ahwyq"; depends=[igraph]; };
   gRbase = derive2 { name="gRbase"; version="1.8-3"; sha256="143qvs5mwypswdq344a48kzn83sx9jskdr9w6kxa3fzhdcqlhi7d"; depends=[graph igraph magrittr Matrix RBGL Rcpp RcppArmadillo RcppEigen]; };
   gRc = derive2 { name="gRc"; version="0.4-2"; sha256="0cqc3s7a1njxzmnx7yx1yjkrazbai3gpw2kc4l7g49ld4j40bsln"; depends=[gRbase MASS]; };
   gRim = derive2 { name="gRim"; version="0.2-0"; sha256="0ihl4vsnp6xkcpcf37p2xcqnbvyvjamcz5060f1kirn8xzwzq29y"; depends=[gRain graph gRbase igraph Rcpp RcppArmadillo]; };
   gSEM = derive2 { name="gSEM"; version="0.4.3.4"; sha256="18kh41ibvfflz59gykiq7j2c6a72i8b0w8c2mcprd1nzhnyhvmhy"; depends=[DiagrammeR htmlwidgets knitr MASS]; };
   gSeg = derive2 { name="gSeg"; version="0.4"; sha256="0fcjhf8hznh1rzyfrk3f3hy16zs1n61b7r3j90pzg873razf97a2"; depends=[]; };
-  gTests = derive2 { name="gTests"; version="0.1"; sha256="19037qn7q92dykry4wrnbdg7irkzk2vwz1j0kq2r836m03bs04nc"; depends=[]; };
+  gTests = derive2 { name="gTests"; version="0.2"; sha256="1h1sd8mrzcniq7rx7frdlxwpnsn8lifng1x99fqq703hs3znl1yq"; depends=[ade4]; };
   gWQS = derive2 { name="gWQS"; version="1.0.0"; sha256="0n0zwfqz5g4js5y3ss64dv5842jypr6sqacs32ax37immd34slhq"; depends=[ggplot2 Rsolnp tableHTML ztable]; };
   gWidgets = derive2 { name="gWidgets"; version="0.0-54"; sha256="13lbbbnmkvb559klgsnz0q27qlyv102xakb6yccxsxjw249hm8c2"; depends=[]; };
   gWidgets2 = derive2 { name="gWidgets2"; version="1.0-7"; sha256="02jrv5x7s3jm2ajpdvgsp4zkn65gjy96rvgdxhf9smp1kb6llzg0"; depends=[digest]; };
-  gWidgets2RGtk2 = derive2 { name="gWidgets2RGtk2"; version="1.0-6"; sha256="1lv0vf1nchkx8v8464ijdmqlpw6y00f07ipx7a4pkii9ai9qv2pw"; depends=[gWidgets2 memoise RGtk2]; };
+  gWidgets2RGtk2 = derive2 { name="gWidgets2RGtk2"; version="1.0-7"; sha256="14c933j0wj3lb5da75zxg3w3mfqh0nqk8rczbi4dnqd8sna6jks9"; depends=[gWidgets2 memoise RGtk2]; };
   gWidgets2tcltk = derive2 { name="gWidgets2tcltk"; version="1.0-5"; sha256="1g0p7bl76rkkrixzw4b1s99gyvi8b5a4vbnsj2wmy7y9grbzndkm"; depends=[digest gWidgets2 memoise]; };
-  gWidgetsRGtk2 = derive2 { name="gWidgetsRGtk2"; version="0.0-84"; sha256="0rn8v9cjziq1xm3w67nii4763w450n49jm253glpk9pvzxdkxhna"; depends=[cairoDevice gWidgets RGtk2]; };
+  gWidgetsRGtk2 = derive2 { name="gWidgetsRGtk2"; version="0.0-85"; sha256="0qxfpajs7a5bv057x743ha8gpvgkg6qxpjdayr45264i64ygfwn0"; depends=[cairoDevice gWidgets RGtk2]; };
   gWidgetstcltk = derive2 { name="gWidgetstcltk"; version="0.0-55"; sha256="06991rqh4927bal7j718bn2ziy6rws8yq682lmp5vbqhdd36afv2"; depends=[digest gWidgets]; };
   gafit = derive2 { name="gafit"; version="0.5.1"; sha256="160z3cv22prf7118447dla9g1gimwkfad8zdil3fg8n4l22rk51a"; depends=[]; };
   gaiah = derive2 { name="gaiah"; version="0.0.2"; sha256="1qc3crjxramyxl86dp8mcmvskixny7x6ji0jqf5dqf5r5qc7zrs9"; depends=[dplyr geosphere ggplot2 lazyeval magrittr maptools raster rgeos sp stringr tidyr]; };
@@ -6335,32 +6478,31 @@ in with self; {
   gamCopula = derive2 { name="gamCopula"; version="0.0-4"; sha256="1nj5pxcbr6k7k1m44ky306yycpx20pw8awlx7lzyw1rx1hrv5ivb"; depends=[copula doParallel foreach gsl igraph MASS mgcv numDeriv VineCopula]; };
   gamRR = derive2 { name="gamRR"; version="0.3.0"; sha256="07zgh6hxkqxrw5da1pbscl8z8hzbgc5ipkzmpimimxa0i9g04c4h"; depends=[boot mgcv]; };
   gamair = derive2 { name="gamair"; version="1.0-0"; sha256="13n2n4b7givzvia93awy7ym0gihl4lr08w3a6ny2pq0f3zbhzw97"; depends=[]; };
-  gambin = derive2 { name="gambin"; version="2.1.1"; sha256="023fmbn1c0zjyvb6b3x4c3wx60qs27i8vi5n4nr0shsamwr7cp6h"; depends=[doParallel foreach gtools]; };
+  gambin = derive2 { name="gambin"; version="2.3.0"; sha256="1kwh8s191m6gsjczqc3svf6zp1k4zi86rqz7s94rahg84vwh6a9b"; depends=[doParallel foreach gtools]; };
   gamboostLSS = derive2 { name="gamboostLSS"; version="2.0-0"; sha256="0z9wzvxjhnjl2bjnd5pxqzvv43hak7x5m23j76qnm05j12vw4bz1"; depends=[mboost stabs]; };
   gamboostMSM = derive2 { name="gamboostMSM"; version="1.1.87"; sha256="0if0x92lch57ksll8d5i3jzk0kh40593b20c17g3hvc33920c7r0"; depends=[mboost]; };
   gamclass = derive2 { name="gamclass"; version="0.56"; sha256="13gy8ys69dkhm54x3vcpqblq4j2hkbsnaswzcq0v0saqd9b1shcs"; depends=[ape car DAAG KernSmooth lattice latticeExtra MASS mgcv randomForest rpart]; };
   games = derive2 { name="games"; version="1.1.2"; sha256="01hbbr2hsxi5j9axpdl0jihpd55pa9hacjxmab8p7cixk3xqqqbf"; depends=[Formula MASS maxLik stringr]; };
   gamesGA = derive2 { name="gamesGA"; version="1.1.3.2"; sha256="0srxsm1zhrx1dpm94mkcsds6rwkx9gi9yfbrkzylhrxgi4g8pvwp"; depends=[shiny]; };
-  gamlr = derive2 { name="gamlr"; version="1.13-3"; sha256="05hxmhmgs83q6d5jhq9y5b5llk1pi2jf61286pmnwbzmdwdhrbr2"; depends=[Matrix]; };
-  gamlss = derive2 { name="gamlss"; version="5.0-5"; sha256="1r911xd6hc87mizdzj11hyfmlc5b79sgkc9y567nxqp5g553n0cn"; depends=[gamlss_data gamlss_dist MASS nlme survival]; };
+  gamlr = derive2 { name="gamlr"; version="1.13-4"; sha256="08igzs2raz6nnkz2aisxaq9jy2mlb49cqlm6gwxp0mrag4q6xxrz"; depends=[Matrix]; };
+  gamlss = derive2 { name="gamlss"; version="5.0-6"; sha256="1gwnp3i7458ms79fqi7pyna6adh0hz2jjigyxgdz98vxh39ix5ps"; depends=[gamlss_data gamlss_dist MASS nlme survival]; };
   gamlss_add = derive2 { name="gamlss.add"; version="5.0-1"; sha256="1agk6pfm04hf9dp5r6dvxqkj1hykx23a16q7vch2sg752z0dadgk"; depends=[gamlss gamlss_dist mgcv nnet rpart]; };
   gamlss_cens = derive2 { name="gamlss.cens"; version="4.3-5"; sha256="06baf94kpprj03dggnyvvmi4nw3qa23cyy1crsa0zfnaqj915ypv"; depends=[gamlss gamlss_dist survival]; };
   gamlss_data = derive2 { name="gamlss.data"; version="5.0-0"; sha256="1mqz7m4iksmx939bz1lq05cxz3bfcksn2ggw3cv7b0k98cykgg1s"; depends=[]; };
   gamlss_demo = derive2 { name="gamlss.demo"; version="4.3-3"; sha256="01p6abppwbnh2a2ks1g08z4iwq2fxf125y9s4qzssybsn76a3gf3"; depends=[gamlss_dist gamlss_tr rpanel]; };
-  gamlss_dist = derive2 { name="gamlss.dist"; version="5.0-3"; sha256="0gkqhb42avj3b8hmc3bnwlrjpi364ya6ca5vzxjli9844nzvvrfm"; depends=[MASS]; };
-  gamlss_inf = derive2 { name="gamlss.inf"; version="1.0-0"; sha256="0n8d8q7ibin4q80js9b8qvxwjkb52xf9y33mmysq2sbl9652b22x"; depends=[gamlss gamlss_dist]; };
+  gamlss_dist = derive2 { name="gamlss.dist"; version="5.0-4"; sha256="165ll56frlxka7iqix1anxdx6612gr62h7p0a27vi45yjbdj24id"; depends=[MASS]; };
   gamlss_mx = derive2 { name="gamlss.mx"; version="4.3-5"; sha256="1jfs3ib2imwgazf8v23fa12iaflv0pm944bkqklx8qcljxp1lcs7"; depends=[gamlss gamlss_dist nnet]; };
   gamlss_nl = derive2 { name="gamlss.nl"; version="4.1-0"; sha256="083l5lsb0csxcp4vffvdv2nr7jk3s2gkcavx66m8inzw16j7xilz"; depends=[gamlss survival]; };
-  gamlss_spatial = derive2 { name="gamlss.spatial"; version="1.3.4"; sha256="08al70wjwb0w98ifhi8mphk332p1q92b5jxfbvam51k7m6s36i3s"; depends=[gamlss gamlss_add gamlss_dist mgcv spam]; };
+  gamlss_spatial = derive2 { name="gamlss.spatial"; version="1.3.5"; sha256="192syg12qwhv9782spdg3sbpm2mfaj20bkr78h1ww64755srfc5k"; depends=[gamlss gamlss_add gamlss_dist mgcv spam]; };
   gamlss_tr = derive2 { name="gamlss.tr"; version="5.0-0"; sha256="02akydpvwl1qkhxpr72lv9qp4z2ra69abyq51b57rh4p60g78vhm"; depends=[gamlss gamlss_dist]; };
   gamlss_util = derive2 { name="gamlss.util"; version="4.3-4"; sha256="0p8lnwrn7cx97qnxls1x532f3ywszdyib2qiwx5qc7sam59h9c8j"; depends=[gamlss gamlss_dist zoo]; };
   gamlssbssn = derive2 { name="gamlssbssn"; version="0.1.0"; sha256="1l8d4qwmq9dklm9imb3cvlncwa6jygf8kg2j1599h1nfhyyhj2vv"; depends=[gamlss gamlss_dist MASS]; };
   gamm4 = derive2 { name="gamm4"; version="0.2-5"; sha256="11wblnh22xq3m3z25i30v2kd0zlf8wa3cm5z38z56rhk3l2wf5bc"; depends=[lme4 Matrix mgcv]; };
-  gammSlice = derive2 { name="gammSlice"; version="1.3"; sha256="1vw8d0v0awyflh4gmbcf1g9nfx52cys8gpqvag5djri59p0y945a"; depends=[KernSmooth lattice mgcv]; };
+  gamm4_test = derive2 { name="gamm4.test"; version="0.1.0"; sha256="0ab6rksr88fsv6whp6cxyshpv5ixmf9lw51cl3rzk870r8q326wg"; depends=[doParallel foreach gamm4 Matrix mgcv plotly RColorBrewer]; };
   gamreg = derive2 { name="gamreg"; version="0.3"; sha256="1svrgbb8qdy2hzpq1g38v2lzmlbrn7qljix827biqzwgiajy69gg"; depends=[doParallel foreach glmnet Rcpp RcppArmadillo robustHD]; };
   gamsel = derive2 { name="gamsel"; version="1.8-0"; sha256="0s29czlakix5ksblixcv7y5in5az9syzs2n71mqzf32vqgf8sf18"; depends=[foreach mda]; };
   gaoptim = derive2 { name="gaoptim"; version="1.1"; sha256="04igpn73k6f6652y496igwypfxmz4igg4jgxx6swqyi37182rqhm"; depends=[]; };
-  gap = derive2 { name="gap"; version="1.1-20"; sha256="0qwppkwk9qn3gbn85nqr0fgr1xfn6rq86i4fcj6g11mbs8ql0g7d"; depends=[]; };
+  gap = derive2 { name="gap"; version="1.1-21"; sha256="0vslbk66h1gkpqrpj4pkxnx7nr1fnjp0zvym9cxzyxww797bd57s"; depends=[]; };
   gap_datasets = derive2 { name="gap.datasets"; version="0.0.2"; sha256="0skxgiwymd8c4vsy2dbddifjj9a0bq52gdd2r62slsv0q9haw96y"; depends=[]; };
   gapfill = derive2 { name="gapfill"; version="0.9.5-3"; sha256="1hwccvshz9z1zgjjrdk6iri272ih11cwpz91rldkpcwly6pqcwhk"; depends=[fields foreach ggplot2 quantreg Rcpp]; };
   gapmap = derive2 { name="gapmap"; version="0.0.4"; sha256="0xz19n0vvdzbfg6afp3y0qfbs3f2nfxib1cyya3cax5wqqfbzw3i"; depends=[ggplot2 reshape2]; };
@@ -6368,7 +6510,7 @@ in with self; {
   gaselect = derive2 { name="gaselect"; version="1.0.5"; sha256="0xzx00n46x6x7w1xbx8nvabkkrna45pv1i70787m8h05q1yrjjij"; depends=[Rcpp RcppArmadillo]; };
   gasfluxes = derive2 { name="gasfluxes"; version="0.2-1"; sha256="0cdqyyqb5dcn5978jmwmf06d9jcga5ma72zf3cdz72hbcil4f93k"; depends=[AICcmodavg data_table MASS sfsmisc]; };
   gastempt = derive2 { name="gastempt"; version="0.4.01"; sha256="0jfk82yw7a95ih1s8ir432j79ix8vjbprwzr5fkzgykk07lfwm68"; depends=[assertthat BH dplyr ggplot2 nlme Rcpp RcppEigen rstan shiny StanHeaders stringr tibble]; };
-  gaston = derive2 { name="gaston"; version="1.5"; sha256="1vlp0jfg35v79dya78h55a3pk6hj93i9hgb7x1mm6f54im0qzims"; depends=[Rcpp RcppEigen RcppParallel]; };
+  gaston = derive2 { name="gaston"; version="1.5.3"; sha256="0y49rgsnzbikm1162awxlamjc2djnxqd9j8if9si4gbmkkp90iwm"; depends=[Rcpp RcppEigen RcppParallel]; };
   gatepoints = derive2 { name="gatepoints"; version="0.1.3"; sha256="02qxxf4a6rl3l0jdgqxmzxfnqd9lh5i0q2knaxxsiz0nd74c1jg5"; depends=[]; };
   gaussDiff = derive2 { name="gaussDiff"; version="1.1"; sha256="0fqjdxp2ibbami75ba16d02dz4rz5sk8mni45di9anydx44g9d45"; depends=[]; };
   gaussfacts = derive2 { name="gaussfacts"; version="0.0.2"; sha256="095x7k7m7sy1gqkbm6wiqn26252dclz62sbnkv6cjvmbdxajl7m9"; depends=[]; };
@@ -6386,7 +6528,7 @@ in with self; {
   gcbd = derive2 { name="gcbd"; version="0.2.6"; sha256="1dvnly0aljv2c4x7sn3q55ncvfdfjfgp7w0k2900p77h4w8nixia"; depends=[DBI lattice Matrix plyr reshape RSQLite]; };
   gcdnet = derive2 { name="gcdnet"; version="1.0.5"; sha256="159dl8v1n7s9wnfrjb6f0b3ssblkqgbfzs15vjxhc8xkz0jp9z1c"; depends=[Matrix]; };
   gcerisk = derive2 { name="gcerisk"; version="17.10.17"; sha256="0l5yasy7bqmcah0fb3j8nafsb79f2s3wdb7jill9mwns00icb6sl"; depends=[cmprsk ggplot2 survival]; };
-  gcite = derive2 { name="gcite"; version="0.8.1"; sha256="08kjpv65h26a7rr0ks6w1vvqsdgfd0xb61pgdbsng02hb9hs7gf5"; depends=[data_table httr pbapply rvest tm wordcloud xml2]; };
+  gcite = derive2 { name="gcite"; version="0.9.2"; sha256="1xwnf8hsakzqg5nm5c14zw239scd2dl9rfd02mj5xp6548qwxrz9"; depends=[data_table httr pbapply rvest tm wordcloud xml2]; };
   gclus = derive2 { name="gclus"; version="1.3.1"; sha256="02ba6zj9bjwrzykamjp40ajynx9xjx9h2i85n0ym0r5lcki4x6fn"; depends=[cluster]; };
   gcmr = derive2 { name="gcmr"; version="1.0.0"; sha256="13xja7rh2wkmi2j7yxrkj99sl96mlcgkp3v5aagnz140jx3jibsx"; depends=[betareg car Formula geoR lmtest nlme sandwich sp]; };
   gconcord = derive2 { name="gconcord"; version="0.41"; sha256="1n3pfwk6vip19q1zhbz1n164f9vi7mig8pcd07c4wxnm5ir9dagy"; depends=[]; };
@@ -6395,10 +6537,9 @@ in with self; {
   gdata = derive2 { name="gdata"; version="2.18.0"; sha256="0zwdj7lscgxr8r62ii8hbdh4mb7sa9w4f5nv32zzrxdvymcpya2b"; depends=[gtools]; };
   gdimap = derive2 { name="gdimap"; version="0.1-9"; sha256="0ksbpcy739bvsiwis0pzd03zb4cvbd8d5wdf8whfn9k6mkj4x9rs"; depends=[abind colorspace geometry gridExtra gsl movMF oro_nifti rgl]; };
   gdistance = derive2 { name="gdistance"; version="1.2-1"; sha256="1wygcx0iki7g10f9gjbycrjjadmsw3153ha9rnqvc9hwwf34m9y1"; depends=[igraph Matrix raster sp]; };
-  gdm = derive2 { name="gdm"; version="1.3.4"; sha256="1z2g1gn8vxrcvyq5lw78wizilcq741ka9xf3isj2wxfhx9a8mqzi"; depends=[doParallel foreach raster Rcpp reshape2 vegan]; };
   gdmp = derive2 { name="gdmp"; version="0.1.0"; sha256="1dlzxf17ssm10pw14mk5lk0plgav2mj8xf39dacyg9hlrz9pjwki"; depends=[]; };
   gdns = derive2 { name="gdns"; version="0.2.1"; sha256="0dvrknhx0d00yi429zjdcs3ghgbpfjhrclkn6cicd049qdp4q396"; depends=[dplyr httr jsonlite purrr stringi tibble]; };
-  gdpc = derive2 { name="gdpc"; version="1.0.2"; sha256="03gh69vb3zmsi7rlikl3a7vr7sar3x12d8lar2qa0nfksn0qa6dk"; depends=[doParallel foreach Rcpp RcppArmadillo xts zoo]; };
+  gdpc = derive2 { name="gdpc"; version="1.0.3"; sha256="0qc9wl7zxqwzigvzpm0nyx735ah8ascmcwd0yays5mqc74iqqx3b"; depends=[doParallel foreach Rcpp RcppArmadillo xts zoo]; };
   gds = derive2 { name="gds"; version="0.1.0"; sha256="0kc3l93640x8d6g3pa9gbr7ci5hmryg9i1nqpasgnvb6ixv6azbm"; depends=[]; };
   gdtools = derive2 { name="gdtools"; version="0.1.6"; sha256="103wnc8sq0iwcnj4j14hd420d2dqdyf13s3f25icsznrlyzdkhf5"; depends=[Rcpp withr]; };
   gear = derive2 { name="gear"; version="0.1.1"; sha256="1sqj9pz15j1v6fm4q2dp0zhdmy9zmmhmgxjwria5ihrp3b5hvwry"; depends=[lattice optimx sp]; };
@@ -6416,8 +6557,8 @@ in with self; {
   gemlog = derive2 { name="gemlog"; version="0.26"; sha256="1cbm9rd2zwih5glj5nkmavb27j21dhsrrrr1d0ss6faf00nprbfq"; depends=[signal]; };
   gems = derive2 { name="gems"; version="1.1.1"; sha256="174mjnpldb0rwjvwdgpcg1acm526gs0pjf9gi5mn9d3x9yz4r5jx"; depends=[data_table MASS msm plyr]; };
   gemtc = derive2 { name="gemtc"; version="0.8-2"; sha256="0c2a9gz6rvsc5qh66ixxa4dz6lwhcmmsf2vnvxl98c9kbvdwfqm9"; depends=[coda igraph meta plyr Rglpk rjags truncnorm]; };
-  gemtc_jar = derive2 { name="gemtc.jar"; version="0.14.3"; sha256="18hbiygpsv67flc4v6z6mir0rfq41v1vsh11dg9phmdr8bx4kcl1"; depends=[rJava]; };
   genBaRcode = derive2 { name="genBaRcode"; version="1.0.0"; sha256="0313kyhy9bg9rabxk2jdgxq2brhj2kkiq0xyd3mlq6j9c626pqi8"; depends=[ape Biostrings ggnetwork ggplot2 igraph network phangorn RColorBrewer reshape2 S4Vectors shiny ShortRead stringdist visNetwork]; };
+  genBart = derive2 { name="genBart"; version="1.0.0"; sha256="0ykmpisp6s1bam09srn7zxrqv5ma55l5x143nj46y8lw91zhmi9n"; depends=[clValid data_table fastcluster ggplot2 gtools limma NMF pca3d psych qusage RColorBrewer reshape2 rmarkdown scales shiny shinydashboard shinyjs statmod stringr VennDiagram]; };
   genMOSS = derive2 { name="genMOSS"; version="1.2"; sha256="18qinckzz7wsw222skrq30izbj6s85i8hq6iicj9nng8gh6jydr8"; depends=[ROCR]; };
   genMOSSplus = derive2 { name="genMOSSplus"; version="1.0"; sha256="1n3ngx1piy3l14k5k95wrgvrjw9238jkygfqanl3xg2na2mmkr26"; depends=[]; };
   genSurv = derive2 { name="genSurv"; version="1.0.3"; sha256="0k5rfpq603szjb76gxffvsbqcav8182h8zwvg4kar68k72yfw1xs"; depends=[]; };
@@ -6436,13 +6577,15 @@ in with self; {
   genemodel = derive2 { name="genemodel"; version="1.1.0"; sha256="1x6n6k9ifv2swhyrghvm6fsz5vh85cdik8225175i9msvmkh928n"; depends=[stringr]; };
   genepi = derive2 { name="genepi"; version="1.0.1"; sha256="1whhdlq9p8gmygv7464hvfz6dhm65gqq1dqls6hgpmw822zxgbd5"; depends=[]; };
   genepop = derive2 { name="genepop"; version="1.0.5"; sha256="17s3azcq1fjjqi5n8rw071k1as4nnwvppmdaz2l5scn0wv120vcq"; depends=[Rcpp]; };
-  generalCorr = derive2 { name="generalCorr"; version="1.0.9"; sha256="0xc1rs9li59ni928g7lznhq3z7bn9hv3giip2h37agrbq4z450ni"; depends=[meboot np psych xtable]; };
-  generalhoslem = derive2 { name="generalhoslem"; version="1.3.1"; sha256="0nir6zrg6dx4pn3wzi8j54y825442rbf7mnd4in9icn8nmk2zsqm"; depends=[MASS reshape]; };
+  generalCorr = derive2 { name="generalCorr"; version="1.1.1"; sha256="1ihp9pksi47f3fsv7wgrp1z4ylmf5n57n6h27v130mi7k5lh1gdy"; depends=[meboot np psych xtable]; };
+  generalhoslem = derive2 { name="generalhoslem"; version="1.3.2"; sha256="1c6mmgdxdm384fl9yqpij3fvjzzima10knljsf50hl4q9f66lvag"; depends=[MASS reshape]; };
   generator = derive2 { name="generator"; version="0.1.0"; sha256="0xjvnmnpdms8rrxxcz6pd8w4rnbv3ghzqv4m63zxia2l98x7z4rf"; depends=[]; };
   genetics = derive2 { name="genetics"; version="1.3.8.1"; sha256="0gfbrpz0zp5bgw3s21wrhjfy70laif47wcrjrm6mjgs6xapiw790"; depends=[combinat gdata gtools MASS mvtnorm]; };
   genie = derive2 { name="genie"; version="1.0.4"; sha256="0ymrn42ik0rfildmyq4z0gsd7injda0dsjgx69nqb6hq0x8s5hqa"; depends=[Rcpp]; };
+  geniusr = derive2 { name="geniusr"; version="1.0.0"; sha256="0akz6hkw9mjwgx9s9j24j5l1z4q41kbhna2245l26ymn4cf0rwjc"; depends=[httr purrr rvest stringr tibble xml2]; };
   genlasso = derive2 { name="genlasso"; version="1.3"; sha256="1q4ybg8xzphnqwywwdb7i2q94dlxwpggvisjqqdj39jh2cabda57"; depends=[igraph MASS Matrix]; };
   genlogis = derive2 { name="genlogis"; version="0.5.0"; sha256="0ybbfm9znkm52kin4f8dxb63rn6b91zsa31baw1lgczh41yswg3r"; depends=[distr doParallel foreach ggplot2 manipulate]; };
+  geno2proteo = derive2 { name="geno2proteo"; version="0.0.3"; sha256="1q054ai42f5gmrj791abj02f663zs7ymdh3pfs3b2lq6i4w9s2fb"; depends=[BiocGenerics GenomicRanges IRanges R_utils RUnit S4Vectors]; };
   genoPlotR = derive2 { name="genoPlotR"; version="0.8.7"; sha256="1zplk0acismv4x528rmmg5jcv6ng6c4vjf5h0mr124fj3kizsrg0"; depends=[ade4]; };
   genomeplot = derive2 { name="genomeplot"; version="1.0"; sha256="15v01ngxq7kxav1bhw1mvqradrmvwsad5xh9l5skivb5smh9795w"; depends=[ggplot2]; };
   genomic_autocorr = derive2 { name="genomic.autocorr"; version="1.0-1"; sha256="1lidrjz1flxw4jvhqdi8y813m7ss4kkvm7bxsdpz60dxxw3204gm"; depends=[data_table magrittr reshape]; };
@@ -6465,7 +6608,7 @@ in with self; {
   geofd = derive2 { name="geofd"; version="1.0"; sha256="16312g9mgw52mpsfky1j20zcqkkv91ihl0xhvv1bl80diffzf0zi"; depends=[fda geoR]; };
   geohash = derive2 { name="geohash"; version="0.3.0"; sha256="1yabnf0a6jd4r6zh83sxb9wcn4vs8csp7c80qs6pi1nx016lirx7"; depends=[Rcpp]; };
   geojson = derive2 { name="geojson"; version="0.2.0"; sha256="1xvbkdaaf55x015pflvcdy06ayrmhqi3my0sdqb48z129rdbr3i7"; depends=[jqr jsonlite lazyeval magrittr protolite sp]; };
-  geojsonR = derive2 { name="geojsonR"; version="1.0.3"; sha256="102crv0yk28j71zlwaz4892fvvf040v533w4p3gq8kl71v35l5jd"; depends=[R6 Rcpp RcppArmadillo]; };
+  geojsonR = derive2 { name="geojsonR"; version="1.0.4"; sha256="0248lb1kgj43czp5z4q7dcrq6ra0jhq62q9x79mgyb83bqn940h8"; depends=[R6 Rcpp RcppArmadillo]; };
   geojsonio = derive2 { name="geojsonio"; version="0.5.0"; sha256="1ywrzjksiim7xhjywhjmp6s3dalqyzh1948xr8958ahpbk242252"; depends=[geojson httr jqr jsonlite magrittr maptools readr rgdal rgeos sp V8]; };
   geojsonlint = derive2 { name="geojsonlint"; version="0.2.0"; sha256="05j7059s1hs8i2fkmkv0mqmda3bgk5zbyi865ab0vl361wiwmdya"; depends=[httr jsonlite jsonvalidate V8]; };
   geoknife = derive2 { name="geoknife"; version="1.5.5"; sha256="0azb98zk4ayfm0z9vz5h59490xvng16p3gpdn60ca9mwdikyxks3"; depends=[curl httr sp XML]; };
@@ -6479,77 +6622,80 @@ in with self; {
   geonames = derive2 { name="geonames"; version="0.998"; sha256="1p0x260i383ddr2fwv54pxpqz9vy6vdr0lrn1xj7178vxic1dwyy"; depends=[rjson]; };
   geoops = derive2 { name="geoops"; version="0.1.2"; sha256="1p2nc6lhqvnxs4l8k0kyqb7mjigaycjms61139sd39qs6wy7cnvp"; depends=[Rcpp]; };
   geoparser = derive2 { name="geoparser"; version="0.1.1"; sha256="0rk2wcig79r28a974bc181p8vypxzbgxcb9rsp24qj9mg02rn5n5"; depends=[digest dplyr httr jsonlite lazyeval purrr stringr tidyr]; };
-  geophys = derive2 { name="geophys"; version="1.3-9"; sha256="05q42b1pqfihamxbh5s5kxkrslr84j5p6y1cybmcl31z9dg92ccl"; depends=[cluster GEOmap RFOC RPMG RSEIS]; };
-  georob = derive2 { name="georob"; version="0.3-5"; sha256="146k3jblfdmny6knxxxmrlvnizbfwabpxh2cdsl9pyi3rzwljscy"; depends=[constrainedKriging fields lmtest nleqslv nlme quantreg RandomFields robustbase snowfall sp]; };
-  geosapi = derive2 { name="geosapi"; version="0.1-0"; sha256="04qab7qs22f1havziv5ynmrmdvi8539gjyfl83x5w5l44rjrx7lb"; depends=[httr openssl R6 XML]; };
+  geophys = derive2 { name="geophys"; version="1.4-1"; sha256="1s64sbr0chv0z2vaw059khfkv8iga1kr6428kkglgafq5x2d6h3q"; depends=[cluster GEOmap RFOC RPMG RSEIS]; };
+  georob = derive2 { name="georob"; version="0.3-6"; sha256="01gq9ymqk3zyjs5n7nj27ky2bnhc7x7npbipa5bcq7jda6gxirhr"; depends=[abind constrainedKriging fields lmtest nleqslv nlme quantreg RandomFields robustbase snowfall sp]; };
+  geosapi = derive2 { name="geosapi"; version="0.2-0"; sha256="15w2rd0scv0aywngp2h7nzbgh4ddbgnf54scd454ixgv67m99p5f"; depends=[httr openssl R6 XML]; };
   geoscale = derive2 { name="geoscale"; version="2.0"; sha256="0gisds0in32xhw54fxfyxvwxgrfjs871wmqf6l915nr896rlx0bm"; depends=[]; };
   geospacom = derive2 { name="geospacom"; version="0.5-8"; sha256="14qyjbq0n43c2zr9gp11gdqgarvmicx3gpq2ql2vjfzrmirxwjgg"; depends=[classInt geosphere maptools rgeos sp]; };
   geosphere = derive2 { name="geosphere"; version="1.5-7"; sha256="186qdm5niq7v3d4w4rngx71znsgi44hnam7698bsx9ar5mg5b6wx"; depends=[sp]; };
   geospt = derive2 { name="geospt"; version="1.0-2"; sha256="1814nn0naxvbn0bqfndpmizjbqcs6rm87g2s378axkn6qpii4bh8"; depends=[fields genalg gsl gstat limSolve MASS minqa plyr sgeostat sp TeachingDemos]; };
   geosptdb = derive2 { name="geosptdb"; version="0.5-0"; sha256="0m0dlazhq2za71mi3q8mz2zvz7yrmda7lha02kh9n820bx89v33z"; depends=[FD fields geospt gsl limSolve minqa sp StatMatch]; };
-  geostatsp = derive2 { name="geostatsp"; version="1.5.4"; sha256="1c2306sh2h0kp3yclgx49z6zy91ghi53ajrj89hjgaxkhzhf6ba7"; depends=[abind Matrix numDeriv raster sp]; };
+  geostatsp = derive2 { name="geostatsp"; version="1.6.0"; sha256="12lkmwfg4wqmc13xzsmgc1g624v2kpacxpycwlcafr60rbix6f9w"; depends=[abind Matrix numDeriv raster sp]; };
   geotech = derive2 { name="geotech"; version="1.0"; sha256="18s7w6h1svc4n1hcgj5njfkf3nflkc53cdwsq5112p3442rlz33f"; depends=[]; };
   geotools = derive2 { name="geotools"; version="0.1"; sha256="0d0vf9dvrrv68ivssp58qzaj8vra26ms33my097jmzmgagwy1spd"; depends=[]; };
   geotoolsR = derive2 { name="geotoolsR"; version="1.0"; sha256="1arbyb1q96ya3smn9sqzqji5v21x37iyyxmvlmqmjj75an8ix5dp"; depends=[dplyr geoR ggplot2 tidyr]; };
   geotopbricks = derive2 { name="geotopbricks"; version="1.4"; sha256="1jqkdhljf0syfvkcy7wgaccrhp3hfx0kymw3vyckhmf1dkwbjvyj"; depends=[raster rgdal stringr zoo]; };
+  geozoning = derive2 { name="geozoning"; version="1.0.0"; sha256="0cqdi2jgqrxc339qkr57dp11jp40x99f9inwamnh7ymg2q7kq14s"; depends=[deldir fields ggplot2 gstat maptools RandomFields raster rgeos sp]; };
   geozoo = derive2 { name="geozoo"; version="0.5.1"; sha256="0g91yhg7zw1bp0lxxblr2irckjg2rl4pg1vgglccnmxkzn0ji2qi"; depends=[bitops]; };
   gepaf = derive2 { name="gepaf"; version="0.1.0"; sha256="0ld7r0dkap7bpmb2fc8x0pzffvnlzp2q1bndx4l2ffiyygsq6f72"; depends=[bitops]; };
   gesca = derive2 { name="gesca"; version="1.0.4"; sha256="1ndn8wgp22pr017x6v7jw8jy4gd06x8110qa860hw8i6pn47wfwv"; depends=[]; };
   gesis = derive2 { name="gesis"; version="0.2.1"; sha256="1cdmhfdjiwsp48a7b0r1mnagnymz606mkzpam9fsvfl72vzji2w7"; depends=[httr rvest xml2]; };
-  getCRUCLdata = derive2 { name="getCRUCLdata"; version="0.2.0"; sha256="169dhfj2v324n358b9czqllalyisg70cgmbqac2fiq3ny53i3z1a"; depends=[data_table dplyr hoardr httr raster tibble tidyr]; };
+  getCRUCLdata = derive2 { name="getCRUCLdata"; version="0.2.2"; sha256="14rw7pdcan4bdjfb16z3h0acx2s8l34vywsp4nn8l1pmmsvgqpap"; depends=[data_table dplyr hoardr httr raster tibble tidyr]; };
   getMet = derive2 { name="getMet"; version="0.3.2"; sha256="0j1h1vy8rd7czpnb4msdb9k560pnh7kjkmpqqwzwin2ms1c0mggb"; depends=[EcoHydRology jsonlite]; };
   getPass = derive2 { name="getPass"; version="0.2-2"; sha256="03ydafhh0sk3rcnpr3paajyji64x2ddp6p814p9mvbmyrblcgzcc"; depends=[rstudioapi]; };
+  getTBinR = derive2 { name="getTBinR"; version="0.5.2"; sha256="0rgjsfvrg3llpj5mnyrypm57yli680i5ir3fw1dgyh40p8pmaks0"; depends=[data_table dplyr ggplot2 ggthemes magrittr plotly purrr scales tibble viridis]; };
   getlandsat = derive2 { name="getlandsat"; version="0.1.0"; sha256="0h2520r5sqyzsajqw2i86byw9zm5za27mhjkrzzw5vr5sh1vdiwb"; depends=[data_table httr rappdirs readr tibble xml2]; };
   getmstatistic = derive2 { name="getmstatistic"; version="0.1.1"; sha256="14w0n658s624anvxv7sqcgy6vfaaxcc7fj4xi1k2qrxd9rdh6dza"; depends=[ggplot2 gridExtra gtable metafor psych stargazer]; };
-  getopt = derive2 { name="getopt"; version="1.20.0"; sha256="00f57vgnzmg7cz80rjmjz1556xqcmx8nhrlbbhaq4w7gl2ibl87r"; depends=[]; };
-  gets = derive2 { name="gets"; version="0.13"; sha256="1z1p40hvqgj5rs5aq4a3wr5hva5ch0wadklmjxsny7hb1i8cix2w"; depends=[zoo]; };
+  getopt = derive2 { name="getopt"; version="1.20.2"; sha256="13p35lbpy7i578752fa71sbfvcsqw5qfa9p6kf8b5m3c5p9i4v1x"; depends=[]; };
+  gets = derive2 { name="gets"; version="0.14"; sha256="01pdpw56q27ihqyp58f0rsggqaqzay74ah1lwi54y7kcyw09yq5w"; depends=[zoo]; };
   gettingtothebottom = derive2 { name="gettingtothebottom"; version="3.2"; sha256="1cz2vidh7k346qc38wszs2dg6lvya249hvcsn6zdpbx0c0qs3y72"; depends=[ggplot2 Matrix]; };
   gettz = derive2 { name="gettz"; version="0.0.3"; sha256="1i06nfm824131q8lwwhrbzg2g9lbnmyp8k57w2vag7v8jj5rdrda"; depends=[]; };
   gfcanalysis = derive2 { name="gfcanalysis"; version="1.4"; sha256="1hjgbiakf01mmaa2jhlnymcsjsj1zssay44p4sdxxxzpx4szs3vv"; depends=[animation geosphere ggplot2 plyr raster rasterVis RCurl rgdal rgeos sp stringr]; };
   gfer = derive2 { name="gfer"; version="0.1.9"; sha256="0dlcwqllhmh5gxfcldjm7z4nancl0avxl3b3xk603mzc7qkrr63j"; depends=[circlize data_table ggplot2 ggrepel googlesheets gsheet httr jsonlite rvest scatterpie stringi tidyr V8 xml2]; };
   gfmR = derive2 { name="gfmR"; version="1.0-1"; sha256="1irzkiq93wh4yphq8x1v2a7plcrskb8fs36qjaa0qhyhvhn0f57i"; depends=[faraway nnet]; };
   ggChernoff = derive2 { name="ggChernoff"; version="0.2.0"; sha256="09bh9isvx3hwwvg72fv6z3fvp8dimpbhvbp328z8amq8jjhph4vf"; depends=[ggplot2 scales]; };
-  ggCompNet = derive2 { name="ggCompNet"; version="0.1.0"; sha256="1199n4s2rh5zg001l3j8wmc6fxkbkk5vzp4q5kg661k3khgx0hd5"; depends=[dplyr geomnet GGally ggmap ggnetwork ggplot2 gridExtra igraph network progress readr scales sna tidyr tnet]; };
   ggExtra = derive2 { name="ggExtra"; version="0.7"; sha256="0vygac13cjcq63f57zd28jyla09za58r77kq1mmsa4qx4dxyfsbl"; depends=[colourpicker ggplot2 gtable miniUI shiny shinyjs]; };
   ggFacetSample = derive2 { name="ggFacetSample"; version="1.0.0"; sha256="04h5j54wblrygiscvb6n40b9lz42ssds1yz9qs5hxppiph68k5zq"; depends=[ggplot2 plyr]; };
-  ggQC = derive2 { name="ggQC"; version="0.0.1"; sha256="0sf7hq69nzdhbrx3rhw92mxqq3cm2wqa79csp9lsvx97gwb60sfl"; depends=[ggplot2 plyr reshape2]; };
+  ggQC = derive2 { name="ggQC"; version="0.0.2"; sha256="1wi9hb5ihix2vfpzbhpq2clbs7c0qh84qbmdfcxw4lknb0ha9ai1"; depends=[dplyr ggplot2 tidyr]; };
   ggROC = derive2 { name="ggROC"; version="1.0"; sha256="0p9gdy7ia59d5m84z9flz5b03ri7nbigb3fav2v2wrml300d24vn"; depends=[ggplot2]; };
   ggRandomForests = derive2 { name="ggRandomForests"; version="2.0.1"; sha256="0f8m0j79d8wbac14zk1s8812rz6vgf04bz1iqq8p4d3sxwnvaj7q"; depends=[ggplot2 randomForest randomForestSRC survival tidyr]; };
   ggThemeAssist = derive2 { name="ggThemeAssist"; version="0.1.5"; sha256="1biw91a8p13h62v4w3yim6ghr98khmyhb3qd0h04asf91vvmpxbv"; depends=[formatR ggplot2 miniUI rstudioapi shiny]; };
   ggallin = derive2 { name="ggallin"; version="0.1.1"; sha256="0hrxa7m07ppvnndivxcgxksdyblb6fw17aw46maqavlvcrz3fjgm"; depends=[ggplot2 scales]; };
-  ggalluvial = derive2 { name="ggalluvial"; version="0.5.0"; sha256="0a39f2dp07kqzlxiixjknj453j9kydfb5cm96mgqzgnwwf7hh2qn"; depends=[alluvial dplyr ggplot2 lazyeval tidyr]; };
+  ggalluvial = derive2 { name="ggalluvial"; version="0.6.0"; sha256="1c7jigi5zph0slfk8z0has3irlm39xlpklzak6s04m2idwl7dcjz"; depends=[dplyr ggplot2 lazyeval rlang tidyr]; };
   ggalt = derive2 { name="ggalt"; version="0.4.0"; sha256="0ssa274d41vhd6crzjz7jqzbwgnjimxwxl23p2cx35aqs5wdfjpc"; depends=[ash dplyr extrafont ggplot2 gtable KernSmooth maps MASS plotly proj4 RColorBrewer scales tibble]; };
   ggbeeswarm = derive2 { name="ggbeeswarm"; version="0.6.0"; sha256="0crk29p5vi1r3a988kms4y7r0iqwgwzsikgvh18r9wbzyr98bb5v"; depends=[beeswarm ggplot2 vipor]; };
+  ggbuildr = derive2 { name="ggbuildr"; version="0.1.0"; sha256="0pld635v6fv46ky7s4icwxlcnr7z6bp5ikf20adpkljwhy0wwxak"; depends=[ggplot2 purrr readr]; };
   ggconf = derive2 { name="ggconf"; version="0.1"; sha256="1h7z4amlycfddisf8ix5kmax56ix8hdllfn77rf4fs5sbqsqxkdm"; depends=[ggplot2 rly tibble]; };
   ggcorrplot = derive2 { name="ggcorrplot"; version="0.1.1"; sha256="04jq1qpsgy8bgpilp1a02va4vz0adkjwrz9znmhv54q81qiv7h51"; depends=[ggplot2 reshape2]; };
   ggdendro = derive2 { name="ggdendro"; version="0.1-20"; sha256="1zzq1hxd0d1qa5hrzwfkdw6fzscpcafbwbpkrb62dm559y8awp0j"; depends=[ggplot2 MASS]; };
   ggdmc = derive2 { name="ggdmc"; version="0.1.3.9"; sha256="07a9g6kwq4hg5zlcxndwmyprl3di7fzsn2960qyixn5bzrfk7sh2"; depends=[coda ggmcmc ggplot2 ggthemes gridExtra loo Rcpp RcppArmadillo rtdists]; };
-  gge = derive2 { name="gge"; version="1.2"; sha256="00kwm4xsr8796qm98b00rlznaicgn0aagkqn2h1qmdw70scifg8l"; depends=[Rcpp reshape2 rgl]; };
+  gge = derive2 { name="gge"; version="1.3"; sha256="0bqclmm4jr7y52n7qh4jikd0804iccjdpy55bvbc2k8ypsp2biik"; depends=[nipals reshape2 rgl]; };
   ggedit = derive2 { name="ggedit"; version="0.2.1"; sha256="0l2ryp8xcyqsgfcywr3y6c2y8j42c15dyrcmfhfimbzy52bmnqxy"; depends=[colourpicker dplyr ggplot2 miniUI plyr reshape2 rstudioapi scales shiny shinyAce shinyBS]; };
-  ggeffects = derive2 { name="ggeffects"; version="0.3.0"; sha256="1r8w5v151s0iljn4d0c9785r0d4isi2j5h0ikwhm17va6bmzni2j"; depends=[dplyr effects ggplot2 magrittr prediction purrr rlang scales sjlabelled sjmisc sjstats snakecase tibble tidyr tidyselect]; };
+  ggeffects = derive2 { name="ggeffects"; version="0.3.1"; sha256="04wmyrs1pzdv120w7pq2g0x51h061lj27p42gaxfcrzdbplvrwv1"; depends=[dplyr effects ggplot2 magrittr prediction purrr rlang scales sjlabelled sjmisc sjstats tibble tidyr tidyselect]; };
   ggenealogy = derive2 { name="ggenealogy"; version="0.3.0"; sha256="169zkcp13g0ll9941a7hh31fll0mavnkb6fd3kvkibdjm621ymyh"; depends=[ggplot2 igraph plotly plyr reshape2 tibble]; };
   ggfan = derive2 { name="ggfan"; version="0.1.1"; sha256="0sqf37afz9kpl2wm3cpansav9ndil8agwrblzj0fhnyrj41s148n"; depends=[colorspace dplyr ggplot2 rstan]; };
   ggfittext = derive2 { name="ggfittext"; version="0.5.0"; sha256="0ih6mqg53y5iaiq003wbzp6qqx4844yh5z9zw5d0k7gqclprmpn5"; depends=[ggplot2 stringi]; };
   ggforce = derive2 { name="ggforce"; version="0.1.1"; sha256="0y49anv5sj1qn1ifcxg1krkkv4z3dlan5lya36vfmzzdamfgq5p6"; depends=[dplyr ggplot2 gtable lazyeval MASS Rcpp scales tweenr units]; };
-  ggformula = derive2 { name="ggformula"; version="0.6"; sha256="0ibzp6m9i87kqi3xjjkgc4lvbhhcvw0j90axr1v8khj2zaxsbwnx"; depends=[ggplot2 magrittr mosaicCore rlang stringr tibble]; };
-  ggfortify = derive2 { name="ggfortify"; version="0.4.1"; sha256="19jwcz1z6g7l65l6cj8zspypfb86pn3x18vzdcgf932n14g646d2"; depends=[dplyr ggplot2 gridExtra scales tibble tidyr]; };
+  ggformula = derive2 { name="ggformula"; version="0.6.2"; sha256="08smdd3s8dh3qjcm25v8h1r8pfvlfvkymnbhlyw4bymq479g4w0j"; depends=[ggplot2 magrittr mosaicCore rlang stringr tibble]; };
+  ggfortify = derive2 { name="ggfortify"; version="0.4.2"; sha256="0xw30mkcsrigbkcqp68h51vjj9pd9fdly5j85j9q6cx22qj59jr9"; depends=[dplyr ggplot2 gridExtra scales stringr tibble tidyr]; };
   gggenes = derive2 { name="gggenes"; version="0.2.0"; sha256="1s3lkdl9wmhcdra90bv8zzb16h2sdmpr15x8c3d0gfw7yir6prj2"; depends=[ggplot2]; };
   ggghost = derive2 { name="ggghost"; version="0.2.1"; sha256="0kvsjadxxdf6yvzk4a6yqkg02q1ysslvf3m0a369bdim396z4hnv"; depends=[animation ggplot2]; };
   ggguitar = derive2 { name="ggguitar"; version="0.1.1"; sha256="1lmfs54h91gzcxin37v4flkywbq3fs648mm1h9ak03xlj5nagzsi"; depends=[dplyr ggplot2 gridExtra lazyeval readr tibble]; };
   gghalfnorm = derive2 { name="gghalfnorm"; version="1.1.2"; sha256="1sy0m6pqmnjbqv60rljyblhis0dxwkhw751jhlad5arcgrcwf4k8"; depends=[ggplot2 ggrepel]; };
   gghighlight = derive2 { name="gghighlight"; version="0.0.1"; sha256="12by8q31fl2kc6w5p72wvd2nxg1cpvhgdbais6hjly1sxi8jd6zp"; depends=[dplyr ggplot2 ggrepel magrittr purrr rlang]; };
-  ggimage = derive2 { name="ggimage"; version="0.0.7"; sha256="0vwxf93h820klkk5k6bc9jdckqr5maki50lprxvxg7awhbj6dchl"; depends=[ggplot2 gridGraphics magick rvcheck scales tibble]; };
-  ggiraph = derive2 { name="ggiraph"; version="0.4.1"; sha256="1bda2p84dia2kgran40d45wag45kpbrq19vxd0j9p07n1s86014m"; depends=[ggplot2 htmltools htmlwidgets plyr rvg uuid xml2]; };
+  ggimage = derive2 { name="ggimage"; version="0.1.0"; sha256="1kh8r859bayrha96b5wyfncbns2qw49v5kfai1jx66w89x3bsr7h"; depends=[ggplot2 gridGraphics magick rvcheck scales tibble]; };
+  ggiraph = derive2 { name="ggiraph"; version="0.4.2"; sha256="0bk6q0psxzggm69yyhfw047xyygp23rk63xvdd9dv6avndfn1h7n"; depends=[ggplot2 htmltools htmlwidgets rvg xml2]; };
   ggiraphExtra = derive2 { name="ggiraphExtra"; version="0.1.0"; sha256="09fiwkaai4sy5kxy4p0c4ldb8ya63czff53hbm6d8fm858fw2byw"; depends=[ggiraph ggplot2 mapproj mgcv moonBook mycor plyr reshape2 scales XML]; };
   ggjoy = derive2 { name="ggjoy"; version="0.4.0"; sha256="1s24zn7gmk52bvjjhanxby7rxbnc2yfl0nx5nv7x7z0zja8gg7nb"; depends=[ggplot2 ggridges]; };
   gglasso = derive2 { name="gglasso"; version="1.4"; sha256="0r4zfgkys8104iw1vzww3qid8a6dyn03x0jlgwrdvavfj86yhq54"; depends=[]; };
   gglogo = derive2 { name="gglogo"; version="0.1.3"; sha256="1dq0bixz44p32kpma5wrqjqklal2ipjmqdwqap0xch542drlpqbn"; depends=[dplyr ggplot2 jpeg knitr magrittr plyr purrr reshape2]; };
   ggloop = derive2 { name="ggloop"; version="0.1.0"; sha256="0jpbgb16jfsv557zvishln98y7nd6p1ryp6hxkrkmhp9p35vzvc0"; depends=[assertthat ggplot2 lazyeval magrittr plyr]; };
+  gglorenz = derive2 { name="gglorenz"; version="0.0.1"; sha256="0ar9ih6yvxb5pyba8y8jjsbwaq808baysjhpd15psjzhfbimjqfm"; depends=[ggplot2 ineq]; };
   ggm = derive2 { name="ggm"; version="2.3"; sha256="1n4y459x2i0jil8chjjqqjs28a8pzfxrws2fcjkg3il7zy0zwbw3"; depends=[igraph]; };
   ggmap = derive2 { name="ggmap"; version="2.6.1"; sha256="0mssb09w818jv58h7mly9y181pzv22sgcd4a079cfpq04bs0wigw"; depends=[digest geosphere ggplot2 jpeg mapproj plyr png proto reshape2 RgoogleMaps rjson scales]; };
   ggmcmc = derive2 { name="ggmcmc"; version="1.1"; sha256="09b89cnmdmiwy18igzxjiq60l1xqjh022fw3rhd5kx7lnh02yza3"; depends=[dplyr GGally ggplot2 tidyr]; };
   ggmosaic = derive2 { name="ggmosaic"; version="0.1.2"; sha256="1mxa09914j9i8b14brl70a7j7ngycj8wkil3sqkd4jwplaszvhsn"; depends=[dplyr ggplot2 gridExtra NHANES plotly productplots purrr tidyr]; };
-  ggmuller = derive2 { name="ggmuller"; version="0.3"; sha256="0qwirr3hlpjvrfihji49k6abk76dj21y98ky478qfnmxk9gq8jwa"; depends=[ape dplyr ggplot2]; };
+  ggmuller = derive2 { name="ggmuller"; version="0.5.1"; sha256="1wa4gcyzbwy1s200w57phahh6rwaf62qn3i400xywkf34fsi1il8"; depends=[ape dplyr ggplot2]; };
   ggnetwork = derive2 { name="ggnetwork"; version="0.5.1"; sha256="13qisn4msjzkpcmn7rh2c4ymqfxp9bayrvqngp9pysfmr6wvc6ia"; depends=[ggplot2 ggrepel network sna]; };
   ggparallel = derive2 { name="ggparallel"; version="0.2.0"; sha256="0zxaff0jbqkbavsmh1yyp3vdrxsam6a66hjw8lamv9pksdw1s2wf"; depends=[ggplot2 plyr reshape2]; };
   ggplot2 = derive2 { name="ggplot2"; version="2.2.1"; sha256="0543782ddv2hp6s0l702mnxfg8n7a6qlbm8bm55x22hnqgz8kg2z"; depends=[digest gtable lazyeval MASS plyr reshape2 scales tibble]; };
@@ -6561,7 +6707,7 @@ in with self; {
   ggpubr = derive2 { name="ggpubr"; version="0.1.6"; sha256="0mvw215bj887958p34f0dzlrb8mgyfcz9b5zvsschvbhamqinqna"; depends=[cowplot dplyr ggplot2 ggrepel ggsci ggsignif gridExtra magrittr purrr scales tidyr]; };
   ggpval = derive2 { name="ggpval"; version="0.2.0"; sha256="1nwf3cz1258khp1barxxp28326bagvlsfhg4rcccbxcpny9vbl7d"; depends=[data_table ggplot2]; };
   ggquiver = derive2 { name="ggquiver"; version="0.1.0"; sha256="0p6li7cxjy54qrmaf9ja6aknnlxwq4sl0z1yip1mznb5rhv6lpxw"; depends=[dplyr ggplot2]; };
-  ggraph = derive2 { name="ggraph"; version="1.0.0"; sha256="0xkhqkckqz201601aqznrgnlgqzs7is1nfpdyalag58q5wl934j8"; depends=[digest dplyr ggforce ggplot2 ggrepel gtable igraph MASS plyr Rcpp scales viridis]; };
+  ggraph = derive2 { name="ggraph"; version="1.0.1"; sha256="0sm1hf2fjfia0s8m5b1x6pi8wvww77rpck86clpa2figwvck8jqr"; depends=[digest dplyr ggforce ggplot2 ggrepel gtable igraph MASS plyr Rcpp scales viridis]; };
   ggraptR = derive2 { name="ggraptR"; version="1.0"; sha256="1n3ildrm8jh6m1j8njx1icbjhpkv3d2ndx59d6ddyg4np09cmp8w"; depends=[assertthat backports colorspace colourpicker DBI dplyr DT evaluate futile_logger futile_options gdtools GGally ggplot2 ggthemes gtable htmltools htmlwidgets httpuv labeling lambda_r lazyeval magrittr miniUI munsell plyr RColorBrewer Rcpp reshape rmarkdown rprojroot scales shiny shinyBS shinyjs stringi stringr svglite tibble xtable yaml]; };
   ggrepel = derive2 { name="ggrepel"; version="0.7.0"; sha256="0g0qfm6g71rv27423c1x846ipilnj213knyzrcr09vrpxc87l618"; depends=[ggplot2 Rcpp scales]; };
   ggridges = derive2 { name="ggridges"; version="0.4.1"; sha256="0kfa3icqdalqdg1klxjrhfl7if35d3wnsiyl86bprw5dyqyh3lh3"; depends=[ggplot2 plyr scales]; };
@@ -6571,7 +6717,7 @@ in with self; {
   ggsignif = derive2 { name="ggsignif"; version="0.4.0"; sha256="1rn58d7pb3axk6chiihryykrzw76adaa2yiafq4d0j6qbhax78f7"; depends=[ggplot2]; };
   ggsn = derive2 { name="ggsn"; version="0.4.0"; sha256="0si3llqlb0dg482cqxhv5lm6raawqwpcd5ymjicw3780xq7d7mrk"; depends=[ggplot2 maptools png]; };
   ggspatial = derive2 { name="ggspatial"; version="0.2.1"; sha256="11vminz4kwv1ny4v9h23sp7j7d45q6v4804xv9fp04qgzbzi9lv8"; depends=[abind ggplot2 maptools plyr raster reshape2 rgdal rosm scales sp]; };
-  ggspectra = derive2 { name="ggspectra"; version="0.2.2"; sha256="162hbi3nygxrazckmjc8nah2i49mwr0kddqrgvdzwqwn05ysdw53"; depends=[dplyr ggplot2 ggrepel lubridate photobiology photobiologyWavebands reshape2 scales tidyr]; };
+  ggspectra = derive2 { name="ggspectra"; version="0.2.3"; sha256="11y2vlcpxyh56pdfzz11bkip2nxv6rrwscqv48p5fvgn9sllly4q"; depends=[dplyr ggplot2 ggrepel lubridate photobiology photobiologyWavebands reshape2 scales tidyr]; };
   ggstance = derive2 { name="ggstance"; version="0.3"; sha256="0sr84nasr8x8ib3mdsjck73gbfg9xba50s5nxdij0ah9xqnpyhpi"; depends=[ggplot2 lazyeval plyr purrr]; };
   ggswissmaps = derive2 { name="ggswissmaps"; version="0.1.1"; sha256="0is48x6k2p5dgj9q4km0dv33a9pcpfhlai9vz295y3acpyrkmnn4"; depends=[ggplot2]; };
   ggtern = derive2 { name="ggtern"; version="2.2.1"; sha256="05dszysn1qr5s4ji4il91pv19xjh5yd09w9f153fmg4cyfl716iz"; depends=[compositions ggplot2 gridExtra gtable latex2exp lattice MASS plyr proto scales]; };
@@ -6579,39 +6725,40 @@ in with self; {
   ggversa = derive2 { name="ggversa"; version="0.0.1"; sha256="0xqn8iznrm8q30pxwka88wi1z7lndi6lm12rq6ngcaxf294fbz01"; depends=[]; };
   ggvis = derive2 { name="ggvis"; version="0.4.3"; sha256="1p7c8f83da30grj5n0v80p5djp6z0r62z5zqpv2a3ahn61w1gm9l"; depends=[assertthat dplyr htmltools jsonlite lazyeval magrittr shiny]; };
   gh = derive2 { name="gh"; version="1.0.1"; sha256="1llinfajb0g7006jd2w1hpskxpmkjhnqarcjb71r1qvsccb2ph7k"; depends=[httr ini jsonlite]; };
-  ghibli = derive2 { name="ghibli"; version="0.1.0"; sha256="0qss6kgmvrjx2cp6lwymh1sc9jmcnkl17lghmh2b19f600d2shr4"; depends=[ggplot2]; };
+  ghibli = derive2 { name="ghibli"; version="0.1.1"; sha256="1jnl017hkzhiic0fndprs68xx3njlijxkaqj9d65xazcwynaq436"; depends=[ggplot2]; };
   ghit = derive2 { name="ghit"; version="0.2.18"; sha256="117dn7j4nsdbdj1c1zndfikih3gxgxnkdxi3z0qmrbpsb9l4h1ic"; depends=[git2r]; };
   ghyp = derive2 { name="ghyp"; version="1.5.7"; sha256="195hsskh2ykafqr93f675xqsmhbrki3abi61hk78bzy09n1d4jfk"; depends=[gplots numDeriv]; };
   giRaph = derive2 { name="giRaph"; version="0.1.2"; sha256="137c39fz4vz37lpws3nqhrsf4qsyf2l0mr1ml3rq49zz4146i0rz"; depends=[]; };
-  gibble = derive2 { name="gibble"; version="0.0.1"; sha256="0cxxd02njjkd5z0n9qy5w1rdwhirjjbn2p4i9m9q68li9cwi4r2i"; depends=[dplyr tibble]; };
+  gibble = derive2 { name="gibble"; version="0.0.2"; sha256="0a9h3q0kwk9aagcpnmih59vbm5n7hdjpa4idwagky351almblmr6"; depends=[dplyr tibble]; };
   gibbs_met = derive2 { name="gibbs.met"; version="1.1-3"; sha256="1yb5n8rkphsnxqn8rv8i54pgycv9p7x1xhinx4l5wzrds3xhf2dc"; depends=[]; };
-  gifti = derive2 { name="gifti"; version="0.7.4"; sha256="02z6r9p0vx22ja2bs6hqb9hjwlcnb8g0kcphqpj6ivkanwh6702w"; depends=[base64enc R_utils xml2]; };
-  gimme = derive2 { name="gimme"; version="0.3-1"; sha256="097772bl3acwfbhlhzfc40j86prdcm6zq7ls892p4352qfnl9r47"; depends=[igraph lavaan qgraph]; };
-  gimms = derive2 { name="gimms"; version="1.0.0"; sha256="0f959gr4nzf9p2gpvdrzlndp24g2hhzc0wbkgpbs056wp8ij0mws"; depends=[Kendall raster RCurl zyp]; };
+  gifti = derive2 { name="gifti"; version="0.7.5"; sha256="1y64bc33b5f64a4khp916s9zb7kbb24xgdg3pdlh0f8m6zrbmp4a"; depends=[base64enc R_utils xml2]; };
+  gimme = derive2 { name="gimme"; version="0.3-2"; sha256="1k79c057024i59iccphzdkh0022dd4dv0vrpn3pvlw9px6j9fbz3"; depends=[igraph lavaan qgraph]; };
+  gimms = derive2 { name="gimms"; version="1.1.0"; sha256="0mqffqvaapb0m0d50vg4kvdp67yq99qf54f5anwq4md0rf3x8lid"; depends=[curl Kendall ncdf4 raster RCurl zyp]; };
   giphyr = derive2 { name="giphyr"; version="0.1.2"; sha256="1id3r291xyj1ylxgmw2cbazaz0jq4bksj8bijwagcawimfxibz45"; depends=[dplyr httr miniUI purrr rstudioapi shiny tibble]; };
   gistr = derive2 { name="gistr"; version="0.4.0"; sha256="1q1wp3q3ppkclvw9fsc9pr5raqv2r9rdm2n8s197b8brfcjilxsi"; depends=[assertthat dplyr httr jsonlite knitr magrittr rmarkdown]; };
-  git2r = derive2 { name="git2r"; version="0.19.0"; sha256="0ws6fbndmaafk2am4dwnz24qizxhld0yh54hgx0z6lzv3p1j209q"; depends=[]; };
+  git2r = derive2 { name="git2r"; version="0.21.0"; sha256="11xgddmxzh9cy85k8fb90il43qswpvryz0h9r0j1gbclfg2f9004"; depends=[]; };
   gitgadget = derive2 { name="gitgadget"; version="0.2.1"; sha256="02jmp5lnk156sfqlv91jn42xds98ihya1x2f97cfwpzlas5qrxky"; depends=[curl dplyr jsonlite miniUI rstudioapi shiny]; };
-  githubinstall = derive2 { name="githubinstall"; version="0.2.1"; sha256="0vcc1s4ywaz8fjsg99knlxms4505wpvl08g48ndxcp3fqzvfc8i7"; depends=[curl data_table devtools httr jsonlite]; };
+  githubinstall = derive2 { name="githubinstall"; version="0.2.2"; sha256="0hqh86r2007hzdbm8rr0fwqhhsna7ji8sdgmdnrxkxraa5f2pfz3"; depends=[curl data_table devtools httr jsonlite mockery]; };
   gitlabr = derive2 { name="gitlabr"; version="0.9"; sha256="0i9sqqvn9xzknybsj9nmi6kclw8c35shy658li17455d28gv4653"; depends=[base64enc dplyr httr magrittr purrr stringr tibble yaml]; };
   gitter = derive2 { name="gitter"; version="1.1.1"; sha256="10m4rs6mhg7xn8dfd41ai0bnn5bnxn6cgqip22hrrpj0i2lzky6l"; depends=[EBImage ggplot2 jpeg logging PET tiff]; };
   givitiR = derive2 { name="givitiR"; version="1.3"; sha256="0y2slhxhj7k413kjaydin9hq3x2xgx4cgjshdplwnmg3x2nakn31"; depends=[alabama rootSolve]; };
-  gjam = derive2 { name="gjam"; version="2.1.6"; sha256="07xx71bk3wwpznmpi2pads6rcf6vx00i2cwyfn9zmg52282kdl4i"; depends=[MASS RANN Rcpp RcppArmadillo]; };
-  gk = derive2 { name="gk"; version="0.5.0"; sha256="0ixkl9jrmd4bcd3m34whfcikvwqbcdnzcd6gf5bdv81r0ygc5jml"; depends=[Ecdat lubridate progress]; };
-  gkmSVM = derive2 { name="gkmSVM"; version="0.71.0"; sha256="1zpxgxmf2nd5j5wn00ps6kfxr8wxh7d1swr1rr4spq7sj5z5z0k0"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges kernlab Rcpp ROCR rtracklayer S4Vectors seqinr]; };
+  gjam = derive2 { name="gjam"; version="2.1.8"; sha256="1232sdmdndxk0bxr1q9jx4gld9spb7mxybxkp9w1abv9391h91fp"; depends=[MASS RANN Rcpp RcppArmadillo]; };
+  gk = derive2 { name="gk"; version="0.5.1"; sha256="1hgxb1lp78pbnj22i7ryf46im301j05y7hh75z2fxvv5nqgg2v75"; depends=[Ecdat lubridate progress]; };
+  gkmSVM = derive2 { name="gkmSVM"; version="0.79.0"; sha256="04dakbgfvfalz4rm4fvvybp506dn5fbj5g86ybfhrc6wywjllsz3"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges kernlab Rcpp ROCR rtracklayer S4Vectors seqinr]; };
   glacierSMBM = derive2 { name="glacierSMBM"; version="0.1"; sha256="0117fzz2b1lccs0kkwz59w2yysi72j54yvz7373pz11w7rjds84f"; depends=[raster sp udunits2]; };
-  glamlasso = derive2 { name="glamlasso"; version="2.0.1"; sha256="1x87nv29r309l539qccbcll4kn889sdds6gvrhyvw68rs370pn2l"; depends=[Rcpp RcppArmadillo]; };
-  glarma = derive2 { name="glarma"; version="1.5-0"; sha256="1afcccjayz6sj39mcg9h54d7dd1as8l63nxfw17bdh18zidr6ghi"; depends=[MASS]; };
+  glamlasso = derive2 { name="glamlasso"; version="3.0"; sha256="1ynhl868kh25l8m04ln6ix31z9r26lrbr5ajprpq9yfhqs4l9ddc"; depends=[Rcpp RcppArmadillo]; };
+  glarma = derive2 { name="glarma"; version="1.6-0"; sha256="0n0mv4xvh5q3y383cs224x6r608ciw4822pkanvmcjsc9zl0z1ar"; depends=[MASS]; };
   glassdoor = derive2 { name="glassdoor"; version="0.7.6"; sha256="0zgkz32vp71fyy25lx4kaa5gj5aj7glhxa0yqnawl1j1a4klj3v3"; depends=[httr xml2]; };
   glasso = derive2 { name="glasso"; version="1.8"; sha256="0gcapw7kyxb19wvdyxq1vsmc5j7yyd0rvqxs2i71k31q352sg6zw"; depends=[]; };
   glba = derive2 { name="glba"; version="0.2"; sha256="0ckcz6v6mfbv34s8sp086czhb5l58sky79k84332rrz6wj47p3md"; depends=[]; };
   glcm = derive2 { name="glcm"; version="1.6.1"; sha256="0xzfhafc7326v3g1xngp584039iknw3q3bcx8f0j4ig125in7sxk"; depends=[Rcpp RcppArmadillo]; };
   gld = derive2 { name="gld"; version="2.4.1"; sha256="0ycm3w8s5bm5w2lqy0qa877cwjcwc9x1zyyyrknwwjjxip250iaw"; depends=[e1071 lmom]; };
-  gldrm = derive2 { name="gldrm"; version="1.1"; sha256="0ixvxlgfvn7dbwd3nr27qr1x3lh0spynmkl9qprk8blvf68lsrvp"; depends=[]; };
-  glinternet = derive2 { name="glinternet"; version="1.0.5"; sha256="1kjy0w6gaj161f52w3gn7kgsld4kqvm53n81kl6lvfwwh2qzw4q4"; depends=[]; };
+  gldrm = derive2 { name="gldrm"; version="1.4"; sha256="0kjd78zpn65zs7nd2fqmm5qs6d0vyjyww93jgcx5ay5qpx83vyrv"; depends=[]; };
+  glinternet = derive2 { name="glinternet"; version="1.0.7"; sha256="0kvhkhkhf5bmqvhxiz83cqw478s55gbkk3s2csa9bnz8ymkcn3f4"; depends=[]; };
   gllm = derive2 { name="gllm"; version="0.35"; sha256="1m9asamh2yha9q8mrllvvc9qj2im6cspvfpafzc8krmh17zq4ins"; depends=[]; };
+  gllvm = derive2 { name="gllvm"; version="0.1.0"; sha256="13ca5ms6bbrj3ny5n438v5ma0d7ccnghysz7c8452cpdq8sn87iy"; depends=[fishMod MASS Matrix mvabund mvtnorm Rcpp RcppEigen statmod TMB]; };
   glm_ddR = derive2 { name="glm.ddR"; version="0.1.1"; sha256="123xqyw73l5lv746zvy2wjwr8xx6gpmwi5n86m8d05dj3bx02dzm"; depends=[ddR Matrix]; };
-  glm_predict = derive2 { name="glm.predict"; version="2.5-1"; sha256="0q3mi89zc7386bcx0ysii5vf4viqdc933k4fhdwqfm9c2z3rzpcy"; depends=[MASS nnet]; };
+  glm_predict = derive2 { name="glm.predict"; version="3.0-0"; sha256="1kqh8g7mrpfnzklk23x7ckbn5p2qcw951cg4s9gnlncggby864ig"; depends=[MASS nnet]; };
   glm2 = derive2 { name="glm2"; version="1.1.3"; sha256="0mmvba1ccmykm2k02ysjbiqj1lwzdwrbxr1hq1kn1gl97xlarp2x"; depends=[]; };
   glmBfp = derive2 { name="glmBfp"; version="0.0-51"; sha256="15jm450j1f0nl7vqvpb2mwapdlvn7kq2kxf5s96x21siwsz7sssv"; depends=[coda Rcpp RcppArmadillo rms Runuran statmod survival]; };
   glmbb = derive2 { name="glmbb"; version="0.3"; sha256="12yabwswps0fmprh8nb9jdny9xrm13jvc0d9m3w04ppmsvalrmwl"; depends=[digest]; };
@@ -6624,20 +6771,21 @@ in with self; {
   glmmBUGS = derive2 { name="glmmBUGS"; version="2.4.0"; sha256="1clnnf0ja2xiqdgi2f1xs04hhi13rnp8jzzdjncbqbdzk2ic3ynl"; depends=[abind MASS sp]; };
   glmmLasso = derive2 { name="glmmLasso"; version="1.5.1"; sha256="1az9vdnyqyrfn1q7zrn6x4ywx77b0vg65cni45x37b0ybkwpis39"; depends=[Matrix minqa]; };
   glmmML = derive2 { name="glmmML"; version="1.0.2"; sha256="0ndvp7a7dxq6ygdwzq783ci1y0zb4xwnj6g4w1cm8zvqak8dxjdb"; depends=[]; };
-  glmmTMB = derive2 { name="glmmTMB"; version="0.1.4"; sha256="0kkh1xrl4mjps9zn2rz804bbs20n3asqv7vykibmd3cg60i3pc2f"; depends=[lme4 Matrix nlme RcppEigen TMB]; };
-  glmmsr = derive2 { name="glmmsr"; version="0.2.0"; sha256="1p9k8iiv3n3jvp20lfbrrfnml809kndfwbw8vilb4dhx9bqds3c9"; depends=[BH lme4 Matrix numDeriv R6 Rcpp RcppEigen]; };
+  glmmTMB = derive2 { name="glmmTMB"; version="0.2.0"; sha256="1yqizxjapdh0n872d26bdgn8a04xc6647mnjhb40g0jj59qgmxrc"; depends=[lme4 Matrix nlme RcppEigen TMB]; };
+  glmmsr = derive2 { name="glmmsr"; version="0.2.1"; sha256="1f2q8zy3jy97y59bdyxhachkv5ndiwp71ihnspjbwz17mvc38cmn"; depends=[BH lme4 Matrix numDeriv R6 Rcpp RcppEigen]; };
   glmnet = derive2 { name="glmnet"; version="2.0-13"; sha256="1zdqp6wnqxzp5qn2ky47phbkrxv3cpgbwmdp896h3xxjvp58sa7k"; depends=[foreach Matrix]; };
   glmnetUtils = derive2 { name="glmnetUtils"; version="1.1"; sha256="0abvxkwfadh56672qh16vql49js9ar8cz8is0bs6i8jgsl5csz91"; depends=[glmnet Matrix]; };
   glmnetcr = derive2 { name="glmnetcr"; version="1.0.3"; sha256="0w04m0q7w5xxm0yv14f2g1ykpy54pxzdplr0xcz9mn43wi4sl65a"; depends=[glmnet]; };
-  glmpath = derive2 { name="glmpath"; version="0.97"; sha256="054v188ffjl6x11cld5s9py22kxcs0iq58x4yhxb0ny7mbma5hkn"; depends=[survival]; };
+  glmpath = derive2 { name="glmpath"; version="0.98"; sha256="1jbiqqd1s93i941dhyyx50zlgwavhyjfw8bx13z4gz05rdvi4gn8"; depends=[survival]; };
   glmpathcr = derive2 { name="glmpathcr"; version="1.0.5"; sha256="0iygw7nj2bin66dh3jwz7p2nwrrz2lir0nmbgk3a2rv3w982r01q"; depends=[glmpath]; };
+  glmtlp = derive2 { name="glmtlp"; version="1.1"; sha256="01kyw0xipyr9z7x9z41wz7rqargzqd8s8ri34ffdvd3ggrdznl0p"; depends=[glmnet]; };
   glmulti = derive2 { name="glmulti"; version="1.0.7"; sha256="154s72sjp6pz7ki7s4mgn5v62j7h0lfz9mngf40wvmy31da2s8ix"; depends=[rJava]; };
   glmvsd = derive2 { name="glmvsd"; version="1.4"; sha256="03axsn85axs4d6fdlr3wcdwq6qa4991svkqc7k9r52kk1ar0w5zz"; depends=[brglm glmnet MASS ncvreg]; };
   glmx = derive2 { name="glmx"; version="0.1-1"; sha256="06v2qxgr16w0qnfhjr9vdqcad5v475pwg2yhw0i236yzqbnsssh6"; depends=[Formula lmtest MASS sandwich]; };
   globalGSA = derive2 { name="globalGSA"; version="1.0"; sha256="1f3xv03m6g2p725ff0xjhvn2xcfm7r7flyrba080i4ldy6fd8jg8"; depends=[]; };
   globalOptTests = derive2 { name="globalOptTests"; version="1.1"; sha256="0yf4p82dpjh36ddpfrby7m3fnj2blf5s76lncflch917sq251h4f"; depends=[]; };
   globalboosttest = derive2 { name="globalboosttest"; version="1.1-0"; sha256="1k7kgnday27sn6s1agzlj94asww81655d2zprx6qg7liv677bxvf"; depends=[mboost survival]; };
-  globals = derive2 { name="globals"; version="0.10.3"; sha256="1brcxwjnpsy3mijkm6lvw12f1y7z800gsbkl2q3bhilp9s13x7nj"; depends=[codetools]; };
+  globals = derive2 { name="globals"; version="0.11.0"; sha256="17spygv9m3mmn01cfxrm05pvny5ddzvr78c60hixqbfh8385na5c"; depends=[codetools]; };
   globe = derive2 { name="globe"; version="1.2-0"; sha256="0xa0q5dac0g7xdlr679f3km8nqxlm7gi4msp9fbfivfvy0rmri96"; depends=[]; };
   glogis = derive2 { name="glogis"; version="1.0-0"; sha256="19h0d3x5lcjipkdvx4ppq5lyj2xzizayidx0gjg9ggb1qljpyw9m"; depends=[sandwich zoo]; };
   glpkAPI = derive2 { name="glpkAPI"; version="1.3.0"; sha256="0173wljx13jali2jxz4k5za89hc64n2j9djz5bcryrqhq4rmkp87"; depends=[]; };
@@ -6648,49 +6796,50 @@ in with self; {
   gma = derive2 { name="gma"; version="1.0"; sha256="08hxbs9z4vq5zjis0lgdcvlysaj1k7i0icdk3wsyqf3wd9znsibi"; depends=[car MASS nlme]; };
   gmailr = derive2 { name="gmailr"; version="0.7.1"; sha256="1gniwwl0ci0wm7a3ai2lqrr590smmkdgyf3aarw6bdygn8hr3s3y"; depends=[base64enc crayon httr jsonlite magrittr mime]; };
   gmapsdistance = derive2 { name="gmapsdistance"; version="3.3"; sha256="09vgrfv5dj0myys0rl767wn0xx1yvmm176c48812ysj2kj3fa29v"; depends=[RCurl XML]; };
-  gmatrix = derive2 { name="gmatrix"; version="0.3"; sha256="0ni5scx48m99jg9a5l93qvfkz6v5m7d5c0fwhp14mgiw32ff1s1r"; depends=[]; };
   gmediation = derive2 { name="gmediation"; version="0.1.1"; sha256="0md4h298vqw67qrjcaia6xz8s7akdpcmxa83irm12qgbh56a5rpr"; depends=[MASS plyr VGAM]; };
   gmeta = derive2 { name="gmeta"; version="2.3-0"; sha256="1izfz6gkisa8rskhfka6q73rcgzwdsmkdhy79jwcaqk25jrwfk60"; depends=[BiasedUrn binom]; };
+  gmfd = derive2 { name="gmfd"; version="1.0"; sha256="1l6hf191v76l5p9f6r4qpq5y940nb23x07mb6lmwna8nnz1sspaz"; depends=[]; };
   gmm = derive2 { name="gmm"; version="1.6-1"; sha256="0giq0ic7gdvglkjby217r70dbz9v0xnvzvzv6icqj0m3rxwarmn1"; depends=[sandwich]; };
   gmnl = derive2 { name="gmnl"; version="1.1-3"; sha256="05p2kikv8zz9ldc6xi5bz7fyinpd0sp2v82hxhx6h54hfa6i7b9v"; depends=[Formula maxLik mlogit msm plotrix truncnorm]; };
   gmodels = derive2 { name="gmodels"; version="2.16.2"; sha256="0zf4krlvdywny5p5hnkr0r0hync6dvzc9yy4dfywaxmkpna8h0db"; depends=[gdata MASS]; };
   gmp = derive2 { name="gmp"; version="0.5-13.1"; sha256="0xh9dli4i7hyjywsn2h780cxl3k7v0q421djyr1wshk7l9s5701g"; depends=[]; };
   gmt = derive2 { name="gmt"; version="2.0-1"; sha256="1g1sj9gq3h3s0pdcfvzg7iifkns5azn3pa83if0d3yzc28cjf0yz"; depends=[]; };
-  gmum_r = derive2 { name="gmum.r"; version="0.2.1"; sha256="127h76nm99ldpaznys5y4rnrvq0kh5pcsjmw21hz79a8rjni7r16"; depends=[BH ggplot2 httr igraph Matrix Rcpp RcppArmadillo SparseM]; };
   gnFit = derive2 { name="gnFit"; version="0.1.0"; sha256="05hbzxxv8443w51mwpdcdk3gyc9bh8va6i65wydw7msdk69daqxs"; depends=[ismev rmutil]; };
   gnlm = derive2 { name="gnlm"; version="1.1.0"; sha256="0fv89cvbnp9n3lgg6y4sqmz9jzcgwj7vd92rwg7hixwrjyqpan4z"; depends=[rmutil]; };
   gnm = derive2 { name="gnm"; version="1.0-8"; sha256="1581lzkb1v3y0arrq7x1bg7c91cii87bifxcdi1jzyc5rxj261la"; depends=[MASS Matrix nnet qvcalc relimp]; };
   gnmf = derive2 { name="gnmf"; version="0.7.1"; sha256="1vbcsxg61mlsdir8szd0rdxfswr7kr6a07750ar2l9b4rkg3yfqz"; depends=[]; };
+  gnorm = derive2 { name="gnorm"; version="1.0.0"; sha256="17h43qwb07wk5hiif89k6dgn6bbdsqfy2jy3k5blbdhhp3b9jcqp"; depends=[]; };
   gnumeric = derive2 { name="gnumeric"; version="0.7-8"; sha256="0iwl00mzsg8h8q67bjp6485idjlmj24362b1rbmkifckss8hrc98"; depends=[XML]; };
   goalprog = derive2 { name="goalprog"; version="1.0-2"; sha256="1h3nd3d53hbz5hl3494lpfjnp1ddklc17nhgw18362jd1nk14awy"; depends=[lpSolve]; };
   goeveg = derive2 { name="goeveg"; version="0.3.3"; sha256="1p66fc1vr09zxp1h81b8by2cldxn0q8vivcc5g3pggb65d9wj846"; depends=[fields mgcv vegan]; };
   gof = derive2 { name="gof"; version="0.9.1"; sha256="1s12gga9d6yizn2y7lzql4jd80lp5jpyml8ybn7xqswp8am82vpg"; depends=[]; };
   gofCopula = derive2 { name="gofCopula"; version="0.2-3"; sha256="1xigbv9mc0c1j3qc0nay0fjwmqvw91cy3x1z6m56bgkgfli7gp2l"; depends=[copula doParallel foreach MASS numDeriv R_utils SparseGrid VineCopula]; };
   gofMC = derive2 { name="gofMC"; version="1.1.2"; sha256="0hbqx0z2517qgmp6sjg76hv74yrkfbswb9rmfjmsmcyzj2x67w86"; depends=[ggplot2 scales]; };
-  gofastr = derive2 { name="gofastr"; version="0.2.1"; sha256="1a291bddhzk0wxrmk9dpiiv93h6si8s19v00wmypw0jfbrjhlc53"; depends=[data_table quanteda slam SnowballC tm]; };
+  gofastr = derive2 { name="gofastr"; version="0.3.0"; sha256="02jn4xbbafl7siwvkqns1818wmw813x9cvqfcnpnmcippiqhrb0b"; depends=[data_table quanteda slam SnowballC tm]; };
   goft = derive2 { name="goft"; version="1.3.4"; sha256="15n1av7r6w8hihxlgw9pd570qgrlcprkkacln15chvjs3b0i60la"; depends=[fitdistrplus]; };
   goftest = derive2 { name="goftest"; version="1.1-1"; sha256="183imn6dy28ama8bywxgyh32vgakv7bsbz4k5qbhnlhqdvzv2v6v"; depends=[]; };
-  goftte = derive2 { name="goftte"; version="1.0.4"; sha256="013xvnp88vir3jd7hn759xqkgp266kzp54105zy5j2a5nnpb4jxk"; depends=[survival]; };
+  goftte = derive2 { name="goftte"; version="1.0.5"; sha256="0mqibs8kpj8qq3wpnlpfdzxx33q77clwli1q7yaxllwzbq0b99hw"; depends=[survival]; };
   gogamer = derive2 { name="gogamer"; version="0.4.3"; sha256="0p11pxwc4vnmf2hh0zxv99qlqkqiszqawh8scw4v861i8ihp84iz"; depends=[dplyr ggplot2 gridExtra magrittr Rcpp scales stringr]; };
   gogarch = derive2 { name="gogarch"; version="0.7-2"; sha256="03gpl73zc6kx4gni59xbg7b38dkpd7p4c7kvlqm46f58j257viik"; depends=[fastICA fGarch]; };
   goldi = derive2 { name="goldi"; version="1.0.1"; sha256="191ac02bwrxr3khq6qirhxzfhv7pqfhqyg7jb473p5vwygpvc53l"; depends=[dplyr futile_logger magrittr Rcpp RcppArmadillo SnowballC tm]; };
   gomms = derive2 { name="gomms"; version="1.0"; sha256="1i9d5y28wrhal990x7xxy99v3z9y2pzlakj7wnynd3dpx5pqr0jj"; depends=[]; };
-  googleAnalyticsR = derive2 { name="googleAnalyticsR"; version="0.4.2"; sha256="0cj7ln3m2k7ihga8lyxc1rzb46qx184vklm76cfxc0s8q67z70ik"; depends=[assertthat dplyr googleAuthR httr magrittr memoise purrr rlang tidyr]; };
+  googleAnalyticsR = derive2 { name="googleAnalyticsR"; version="0.5.0"; sha256="183wywvsfq58yn8hj6kz83c3by36w8knckndwbih2xhxqqqj3cf0"; depends=[assertthat dplyr googleAuthR httr magrittr memoise purrr rlang tidyr]; };
   googleAuthR = derive2 { name="googleAuthR"; version="0.6.2"; sha256="14a236yz0610rh98f80prcnc2401zy52rw326wvk11ghl3w1f88z"; depends=[assertthat digest httr jsonlite memoise R6]; };
   googleCloudStorageR = derive2 { name="googleCloudStorageR"; version="0.4.0"; sha256="1iwn0qjyxyg1xr1s492h7z2g5yzcfw8kasd4ghxmghnqvhzzf7vn"; depends=[assertthat curl googleAuthR httr jsonlite openssl yaml zip]; };
   googleComputeEngineR = derive2 { name="googleComputeEngineR"; version="0.2.0"; sha256="1kslsi7gc4na8pm8dyizswf9pfpdq1rprn08rd7kbxsisclbzc7y"; depends=[assertthat future googleAuthR httr jsonlite]; };
   googleLanguageR = derive2 { name="googleLanguageR"; version="0.1.1"; sha256="1r601s81dm18wb44r65ssx9kxdj849caykzpvwba1bk1xvpp4fni"; depends=[assertthat base64enc googleAuthR jsonlite magrittr purrr tibble]; };
+  googlePolylines = derive2 { name="googlePolylines"; version="0.4.0"; sha256="041dmsi938y47287hdv30c99d8rxjwdc12d7s29shghh64h96y50"; depends=[BH Rcpp]; };
+  googlePrintr = derive2 { name="googlePrintr"; version="0.0.1"; sha256="19rm78x8qd61ilc6h1kn3dw63m6dfsckqkd3n76krvi0akgl72w5"; depends=[googleAuthR httr jsonlite]; };
   googlePublicData = derive2 { name="googlePublicData"; version="0.16.1"; sha256="15hyslpqvncg21q581h061rfyg99y8lavqw1x8hzl7xzd49bn9r5"; depends=[readxl XML]; };
   googleVis = derive2 { name="googleVis"; version="0.6.2"; sha256="1idnp9ndgg2dwybdpw7q3pkaw9kw2vy2xkls9qykrpz1p6nf3mn1"; depends=[jsonlite]; };
   googledrive = derive2 { name="googledrive"; version="0.1.1"; sha256="1fshv85s4ldw2kc7lbbdvrl260pz76z04awx1n6lg0f5xmba9rfg"; depends=[curl glue httr jsonlite purrr rlang tibble uuid]; };
   googleformr = derive2 { name="googleformr"; version="0.0.3"; sha256="0smykcjyqmk61ws5jk462l8x5hg0h9nwq55q5pqfgcq1j3yfniqh"; depends=[httr rvest xml2]; };
   googlesheets = derive2 { name="googlesheets"; version="0.2.2"; sha256="18q0xmxn09b52rmky7gr5flp0awndcnsgb7zcvkzvkrkvmwad52b"; depends=[cellranger dplyr httr jsonlite purrr readr stringr tidyr xml2]; };
-  googleway = derive2 { name="googleway"; version="2.2.0"; sha256="11x8h5amczydh8d7wrqqwyk386k63kxhbbivb2gw1fi7ffyi24jb"; depends=[curl htmltools htmlwidgets jpeg jsonlite magrittr Rcpp shiny]; };
+  googleway = derive2 { name="googleway"; version="2.4.0"; sha256="176jmwnn6k8w6078jcq9b4pzix70sbs118g28jpi4in4sznr1dvg"; depends=[curl googlePolylines htmltools htmlwidgets jpeg jqr jsonlite magrittr Rcpp scales shiny viridisLite]; };
   goric = derive2 { name="goric"; version="0.0-95"; sha256="05sbsnjjlpy1z0mfbsrihrp2gp4d66cvprhgzxy76lipgm5mmvqi"; depends=[MASS Matrix mvtnorm nlme quadprog]; };
   govStatJPN = derive2 { name="govStatJPN"; version="0.1"; sha256="03sywa7rl5rblvv370mfszz5ngp850qf32yydy1fdx10lv5amrfl"; depends=[]; };
   gower = derive2 { name="gower"; version="0.1.2"; sha256="1mbrj1lam3jfbby2j32shmmj5cn09zx3rkxbamq7q8sdg39b54gb"; depends=[]; };
   gpDDE = derive2 { name="gpDDE"; version="0.8.2"; sha256="100g2f8zlpbwxb46h62pgvidll8aflz1zl4inyh8dml6vhm9pilp"; depends=[CollocInfer deSolve fda forecast lars limSolve MASS nnls penalized trustOptim TSA]; };
-  gpHist = derive2 { name="gpHist"; version="0.1"; sha256="137zsyln42nxdhi36p4ljvg9ib3wipxcbgkvcj8b8nx0vz9vk52z"; depends=[]; };
   gpairs = derive2 { name="gpairs"; version="1.2"; sha256="09mkdbs9hklxnmqcsnf65s3dfsfcr7kppp6zxj08v5hxym1gpz3l"; depends=[barcode colorspace lattice MASS vcd]; };
   gpclib = derive2 { name="gpclib"; version="1.5-5"; sha256="08j81b8wymsgin20n54gvm6m54rmdic51p6qzs9cz4pmgl7dkkjv"; depends=[]; };
   gpg = derive2 { name="gpg"; version="0.5"; sha256="1l13wwmhayyhgl2m3r5f5p3m3y3z3pcj38liywx6a24hpxmir7pp"; depends=[curl]; };
@@ -6702,11 +6851,10 @@ in with self; {
   gpr = derive2 { name="gpr"; version="1.1"; sha256="03ywik11kc6cnaqrzzzi94jkrdbd378m3sf26f2vpb7d834nl728"; depends=[]; };
   gptk = derive2 { name="gptk"; version="1.08"; sha256="0fk6c8f8fni4y2n2cbfwywlfyz74xlb8lx25wajsxr2v4x74pa7l"; depends=[fields Matrix]; };
   gpuR = derive2 { name="gpuR"; version="2.0.0"; sha256="1aq9gmnl69yw7124nr8jaih7598gkknp7krmdsnx600i4k37yzjs"; depends=[assertive BH Rcpp RcppEigen RViennaCL]; };
-  gputools = derive2 { name="gputools"; version="1.1"; sha256="0np1lndvppdi409a1kfbbl0z5hr8wg2q473jch58zd16d2ickwkb"; depends=[]; };
   gqlr = derive2 { name="gqlr"; version="0.0.1"; sha256="0qvyvy514ma5wi2qm6a8praqa7js9wl0hh0ack1hknw33g2gyqhy"; depends=[graphql jsonlite magrittr pryr R6]; };
   gquad = derive2 { name="gquad"; version="2.1-1"; sha256="19k7cqp2j5vb6m9hxdm951wfjh6nsswb64pdz9g93ypcqrg02wa4"; depends=[ape seqinr]; };
   grImport = derive2 { name="grImport"; version="0.9-0"; sha256="1d8fd7502qj7cirjqdkr1qj51rylw2fz5hs06avfvc2dxs2xwfw1"; depends=[XML]; };
-  gradDescent = derive2 { name="gradDescent"; version="2.0.1"; sha256="0kxyvr30hygg82s5m7nng02fvn6nak43y2v18445xbb05y6f5gmx"; depends=[]; };
+  gradDescent = derive2 { name="gradDescent"; version="3.0"; sha256="1jxgvnjw9qk5bkb0fw4kyks4vb9d1933jn79ry0w6956mq2xbb79"; depends=[]; };
   grade = derive2 { name="grade"; version="0.2-1"; sha256="085hfvqn880yk19axdjv3z9jr33kls212vs172a8mzhnkallph1r"; depends=[]; };
   gradientPickerD3 = derive2 { name="gradientPickerD3"; version="0.1.0.0"; sha256="0b20iqfipr7migwk1fl4lvdf4ghprqivcgmchfshhr8q82hyd1q0"; depends=[htmlwidgets jsonlite shiny]; };
   gramEvol = derive2 { name="gramEvol"; version="2.1-3"; sha256="0z2511zhs2gcdkwp29n6fpafhn49h69yi56nmrhh9zc8jqj1rwpa"; depends=[]; };
@@ -6714,6 +6862,7 @@ in with self; {
   granovaGG = derive2 { name="granovaGG"; version="1.4.0"; sha256="0khqlqc6jg9cpdq06g6jlpfjcw3m6rj40ipljfai8g1630ril6q4"; depends=[ggplot2 gridExtra plyr RColorBrewer reshape2]; };
   grapes = derive2 { name="grapes"; version="1.0.0"; sha256="079b7w2xhb0a481s7qihhka0l9ydkjdph0865wjjkcbpr4775p26"; depends=[magrittr]; };
   graphTweets = derive2 { name="graphTweets"; version="0.3.2"; sha256="13kab1nz85ghs5n882ss513di30b7lg72h676v37404ypj5a1vi1"; depends=[dplyr igraph reshape2]; };
+  grapherator = derive2 { name="grapherator"; version="1.0.0"; sha256="071by9b8figbsf4g0f8a8mgcdksjksc57mnlgggilw7py1yjnjlh"; depends=[BBmisc checkmate deldir ggplot2 lhs reshape2 vegan]; };
   graphicalVAR = derive2 { name="graphicalVAR"; version="0.2.1"; sha256="1z4x32ji71rq1x89r3wmjhm1fq7klggpz6c1cf45fvcd9qs6ykhk"; depends=[dplyr glasso glmnet igraph Matrix mvtnorm qgraph Rcpp RcppArmadillo]; };
   graphicsQC = derive2 { name="graphicsQC"; version="1.0-8"; sha256="12vg93xfmkv73i19vkb10q2qngmsxd3y42z3l6izdywbdc3cdfkg"; depends=[XML]; };
   graphkernels = derive2 { name="graphkernels"; version="1.4"; sha256="1dwk1bd2nx9kdzxq31cgynd75r7am49ygkaryb6iqcmva1wc5xs0"; depends=[igraph Rcpp RcppEigen]; };
@@ -6721,14 +6870,14 @@ in with self; {
   graphql = derive2 { name="graphql"; version="1.4"; sha256="103vggx9273dg4fkrhik4p1vj8qh7gxavyh933qxhajpmhnfhksh"; depends=[jsonlite Rcpp]; };
   graphscan = derive2 { name="graphscan"; version="1.1.1"; sha256="1dgjb0grdymhimdgwnddjcivgy2i9r1i1nni4v9mx0447skcahk9"; depends=[ape rgl snowfall sp]; };
   graticule = derive2 { name="graticule"; version="0.1.2"; sha256="1yvrijvyjilfql72dxj32b3sczqv065zj61729wrrzn63xcifvmb"; depends=[raster sp]; };
-  grattan = derive2 { name="grattan"; version="1.5.2.5"; sha256="1v64m9jbh89imp29fl6lbnzmfj8lz24jhr6wlsmfz1wsplln8hf7"; depends=[assertthat data_table forecast hutils magrittr Rcpp RcppParallel rsdmx zoo]; };
-  gravity = derive2 { name="gravity"; version="0.5"; sha256="0bn7pysy1ajmbihx15xj0pa3aba2qx5dmy78a0k0y1699x9hr465"; depends=[glm2 lmtest MASS multiwayvcov sandwich]; };
+  grattan = derive2 { name="grattan"; version="1.5.3.5"; sha256="0cbgxjrw461zf8axsnl7rhi19gcji9s9d0h5s1bd89930l7ldqfg"; depends=[assertthat data_table fastmatch forecast hutils magrittr Rcpp RcppParallel rsdmx zoo]; };
+  gravity = derive2 { name="gravity"; version="0.6"; sha256="15ngk6a5f6xjvisk6ma625iaw4ybg7722xgmnr4rnlmsgm95v668"; depends=[censReg glm2 lmtest MASS multiwayvcov sandwich survival]; };
   grec = derive2 { name="grec"; version="1.1.1"; sha256="1qn1vbhlw42wqg9vj5plb12pg9xskn32z27ifyzm4kggp1vckgbf"; depends=[imagine raster]; };
   greport = derive2 { name="greport"; version="0.7-1"; sha256="1h1g3khb30n3y8l1sxpas2s6s667az4yxvsq42x5dfx8fic42p6n"; depends=[data_table Formula ggplot2 Hmisc lattice latticeExtra rms survival]; };
-  greta = derive2 { name="greta"; version="0.2.0"; sha256="0fp540an93h4a1bkmc42gj7j8hxdkw5zrcaj0mg64rahx0xn2dvq"; depends=[coda progress R6 reticulate tensorflow]; };
+  greta = derive2 { name="greta"; version="0.2.3"; sha256="10vli747b5a1m53qszxk91wppg9511la9yc823qrr51s92z8i222"; depends=[coda progress R6 reticulate tensorflow]; };
   grex = derive2 { name="grex"; version="1.7"; sha256="0bciyafqwx404axidz4dlj856mzy73ij5sifxhvbjnn07rx844c9"; depends=[]; };
   greyzoneSurv = derive2 { name="greyzoneSurv"; version="1.0"; sha256="115i0d4fy4p4g4vd419hj9f23hi8cbiyfilgpgmag91ilr1xpcdp"; depends=[Hmisc survAUC survival]; };
-  grf = derive2 { name="grf"; version="0.9.4"; sha256="0v5gz3kv7xiymbi0dvqbzyhfvmlyimcnqylbdp76dslgwhm03nk5"; depends=[Rcpp]; };
+  grf = derive2 { name="grf"; version="0.9.5"; sha256="0i3x5h19n3cq8mchm3zwg3rgr1ywknkghsk50m70zcjpb4cdbsj6"; depends=[Matrix Rcpp RcppEigen]; };
   gridBase = derive2 { name="gridBase"; version="0.4-7"; sha256="09jzw4rzwf2y5lcz7b16mb68pn0fqigv34ff7lr6w3yi9k91i1xy"; depends=[]; };
   gridDebug = derive2 { name="gridDebug"; version="0.5-0"; sha256="12zrl7p8p7071w5viymdipycja7a2arvy0aahgahd5nlx1k1gha0"; depends=[graph gridGraphviz gridSVG]; };
   gridExtra = derive2 { name="gridExtra"; version="2.3"; sha256="0fwfk3cdwxxim7nd55pn7m31bcaqj48y06j7an2k1v1pybk0rdl1"; depends=[gtable]; };
@@ -6745,7 +6894,7 @@ in with self; {
   groupdata2 = derive2 { name="groupdata2"; version="1.0.0"; sha256="11j5p3afr5qc227ljdwwwp17jzaylqlhc7g0gr3jvgrhjnijs2a0"; depends=[dplyr numbers plyr]; };
   grouped = derive2 { name="grouped"; version="0.6-0"; sha256="1glxgacpwk7yjbkwg5ci6bmb2il6hf5zhydwi5bbq6hc032m9976"; depends=[MASS]; };
   groupsubsetselection = derive2 { name="groupsubsetselection"; version="1.0.3"; sha256="118cj5xc8nbq4fs2gbzg1nhynixaflbl0si77gyy4ybw0drsz4nj"; depends=[]; };
-  grove = derive2 { name="grove"; version="1.0"; sha256="1w8qz2k6m2xm0n699dj69aiagxy728q66bphxbmn71kakymvkgnz"; depends=[Rcpp RcppArmadillo wavethresh]; };
+  grove = derive2 { name="grove"; version="1.1"; sha256="0fqsj5dx7py7cin3hvfkxglh8v3x0dwj6cxy4h5vbddjl687db5x"; depends=[Rcpp RcppArmadillo wavethresh]; };
   growcurves = derive2 { name="growcurves"; version="0.2.4.1"; sha256="0h96c1hd6cdzc2l2a9dakmxn2hspvr0fpx9938iscm4hi9ds97m2"; depends=[Formula ggplot2 Rcpp RcppArmadillo reshape2]; };
   growfunctions = derive2 { name="growfunctions"; version="0.13"; sha256="19ngsd326vws2f3wsrkcsyzn64fm9nnqvnbamfw6aal9xzzzz59m"; depends=[ggplot2 Matrix mvtnorm Rcpp RcppArmadillo reshape2 spam]; };
   growth = derive2 { name="growth"; version="1.1.0"; sha256="0d1hc56ybp5chckqv5q5jvpgbl7xn9dkbc4dd4sz5gawn1hngbxm"; depends=[rmutil]; };
@@ -6755,7 +6904,6 @@ in with self; {
   growthrates = derive2 { name="growthrates"; version="0.7.1"; sha256="0ci846jgshnvrvifl8snyax8ljs9n13lr42mzm89l0gpkg6lh2g0"; depends=[deSolve FME lattice]; };
   grpSLOPE = derive2 { name="grpSLOPE"; version="0.2.1"; sha256="1r9irf83f7szhkdqis2rakil8fsr3rqsfrj4dmbg3r3rnr8wl8nh"; depends=[SLOPE]; };
   grplasso = derive2 { name="grplasso"; version="0.4-5"; sha256="15bqckq9qjdlllhfpb21vzgi9msbl544alkrz01w1vvb3hk1847y"; depends=[]; };
-  grppenalty = derive2 { name="grppenalty"; version="2.1-0"; sha256="12hbghmg96dwlscjy6nspgkmqqj4vwq2qcwcz1gp50a08qbmdcrk"; depends=[]; };
   grpreg = derive2 { name="grpreg"; version="3.1-2"; sha256="042waw813jfc163376019zd7ngwrmrr26z17c2kw7ggvp1vz5m9q"; depends=[Matrix]; };
   grpregOverlap = derive2 { name="grpregOverlap"; version="2.2-0"; sha256="1kq8wxpx21irwckndgfkzdy5jgzf7pmcwpclmjzjxznv6cyaikd0"; depends=[grpreg Matrix]; };
   grpss = derive2 { name="grpss"; version="3.0.1"; sha256="01bjjhv3vkvn5h363g5a9dlm7kzq10q7ixmrc0kkq5hsbs31vl3x"; depends=[doParallel foreach grpreg MASS]; };
@@ -6781,6 +6929,7 @@ in with self; {
   gsw = derive2 { name="gsw"; version="1.0-5"; sha256="0lv4x4is53xybgg205dncizpnqnakqk47b5wgys2kr4ixqc8jipb"; depends=[testthat]; };
   gsynth = derive2 { name="gsynth"; version="1.0.6"; sha256="0fzdlflrl9qlvbzjdspws3naabwyphwqys01wp4wkw5y7whq0mar"; depends=[abind doParallel foreach GGally ggplot2 mvtnorm Rcpp RcppArmadillo]; };
   gt4ireval = derive2 { name="gt4ireval"; version="2.0"; sha256="1d567iz57xqszm45l1wq4n2qrrmyz8ssll1vllfmncb9ibbnx4f3"; depends=[]; };
+  gtWAS = derive2 { name="gtWAS"; version="1.0.0"; sha256="1pk7m1apgksbh8a3xb94aj3wp9dbcv5rm6brdcjb5fsgxj7iaq5c"; depends=[]; };
   gtable = derive2 { name="gtable"; version="0.2.0"; sha256="0vz7073m0a2q12qzzihrfh5c2kx5jqi5l7z470fxmwqghdllh7l0"; depends=[]; };
   gtcorr = derive2 { name="gtcorr"; version="0.2-1"; sha256="1n56zmyv58jwr95p453jb86j82pdnq57gfc8m15jndjc9p31zl0m"; depends=[]; };
   gte = derive2 { name="gte"; version="1.2-2"; sha256="1x528iakyjhh4j92cgm6fr49a3rdi4cqy28qhsfr2dwvxzxchl6h"; depends=[survival]; };
@@ -6792,7 +6941,7 @@ in with self; {
   guess = derive2 { name="guess"; version="0.1"; sha256="198pxi0yipgm9wccpj3y4a0gkibhyxcmb7v5dz7ipzrk44ha5g6j"; depends=[Rsolnp]; };
   gumbel = derive2 { name="gumbel"; version="1.10-1"; sha256="12rkri8bvgjn0ylf1i4k9vpb8mvbasidvx2479kmis2rc1p07qq7"; depends=[]; };
   gunsales = derive2 { name="gunsales"; version="0.1.2"; sha256="02vz16lhym72vvf48yai1g371wygdlmi63a6ylc147l0b69jgw31"; depends=[data_table dplyr ggplot2 seasonal x13binary zoo]; };
-  gutenbergr = derive2 { name="gutenbergr"; version="0.1.3"; sha256="1x4db2dgnqi17w5rdx46v78j6055vqp8nnh7m87yq7j7b3d1r9gi"; depends=[dplyr lazyeval purrr readr stringr urltools]; };
+  gutenbergr = derive2 { name="gutenbergr"; version="0.1.4"; sha256="1xf9h0ikfzgq6bzzxa7wih29cgbfk6lgdv041fprxbd9rz38agi9"; depends=[dplyr lazyeval purrr readr stringr urltools]; };
   gvc = derive2 { name="gvc"; version="0.5.2"; sha256="0cfvli6ap5kw3agv94d7g7rhmlxd66yyngc7c9pl4fsxf7sm6nx4"; depends=[decompr diagonals]; };
   gvcm_cat = derive2 { name="gvcm.cat"; version="1.9"; sha256="1kwfcmnl1ivv1lh3zxccwls2xfyx3l8v71ngc0bg6441i81d4xp5"; depends=[MASS Matrix mgcv]; };
   gvlma = derive2 { name="gvlma"; version="1.0.0.2"; sha256="0gj52hg665nmlwgbjh9yvz7a3sbzlbj41ksxchnnlxaxipdf6sl8"; depends=[]; };
@@ -6803,11 +6952,12 @@ in with self; {
   gwrr = derive2 { name="gwrr"; version="0.2-1"; sha256="1fjk217pimnmxsimqp9sn02nr1mwy3hw3vsr95skbfsd6vdda14d"; depends=[fields lars]; };
   gym = derive2 { name="gym"; version="0.1.0"; sha256="0vcwzgawqwjsf65hr1mbjkz3px8zsibfkn42jpsg39n13jpfjq8v"; depends=[httr jsonlite]; };
   gyriq = derive2 { name="gyriq"; version="1.0.2"; sha256="12vbnhianzi4l43czaxrbnbkz1h8lvmwjys0y3c2ml3g6dmwwfji"; depends=[CompQuadForm irlba mvtnorm survival]; };
-  h2o = derive2 { name="h2o"; version="3.16.0.1"; sha256="1f4h1js70vcv6v7ncap5yfhzzzd0r3bk6limj8bzn2h3mnkck39z"; depends=[jsonlite RCurl]; };
+  h2o = derive2 { name="h2o"; version="3.16.0.2"; sha256="181rm5y7wwmpzi45sy62blr6jk9wfbs3j14ansmh7ad1rbml3zm3"; depends=[jsonlite RCurl]; };
   h5 = derive2 { name="h5"; version="0.9.9"; sha256="14p7i1sj24ky87kd7qr3n9fc9l64s0bp0rwbyl6i2x69xn75gpsx"; depends=[Rcpp]; };
-  hBayesDM = derive2 { name="hBayesDM"; version="0.4.0"; sha256="0x7lpfx3d559fzkmrj3fb057zb3jm2y5l55zaqy0w7pnzgdpqnh6"; depends=[ggplot2 loo mail Rcpp rstan rstantools]; };
+  hBayesDM = derive2 { name="hBayesDM"; version="0.5.0"; sha256="174z98jvi04df04lpdxh3j8lmjvgrg287nxfnrcvjkibc0jiss4m"; depends=[ggplot2 loo Rcpp rstan rstantools]; };
   hIRT = derive2 { name="hIRT"; version="0.1.2"; sha256="0pqp6bycr13di1hbi5sqnkiannz2hyg0ysshswv2i9fp0vkhdhqf"; depends=[pryr rms]; };
   hNMF = derive2 { name="hNMF"; version="0.4"; sha256="1ivj9danq3mp6mkrm6mdd529rmzb0qhl38lgij76ma2j9fkw35zq"; depends=[NMF nnls oro_nifti R_matlab rasterImage spatialfil]; };
+  hR = derive2 { name="hR"; version="0.1.1"; sha256="18a9nhnsw7va1ambj2lc99ralhildc3a2l6xpilfanig4pg7cq08"; depends=[data_tree reshape2 visNetwork]; };
   hSDM = derive2 { name="hSDM"; version="1.4"; sha256="1jq6hdnyv446ng62srip0b48kccf0qw3xqym3fprg74mjdy3inqr"; depends=[coda]; };
   haarfisz = derive2 { name="haarfisz"; version="4.5"; sha256="1qmh4glwzqwqx3pvxc71rlcimp1l0plgdf380v9hk0b4gj7g3pkf"; depends=[wavethresh]; };
   hail = derive2 { name="hail"; version="0.1.1"; sha256="1nrc9msqyy5iq2i6p8875anbqswxl2z6vdd4hvihnl22qh5fnbvh"; depends=[]; };
@@ -6823,7 +6973,7 @@ in with self; {
   happybiRthday = derive2 { name="happybiRthday"; version="0.0.1"; sha256="0rrvi5kx09p74xwxvqcwibbh4qjlk4jxb89grx74chjxk9ak2yv8"; depends=[data_table dplyr gh lubridate tidyr]; };
   hapsim = derive2 { name="hapsim"; version="0.31"; sha256="0jw6iw89d4y8wjy58biv40szp123ql7frz1mmdjdxljmwaby963h"; depends=[MASS]; };
   harmonicmeanp = derive2 { name="harmonicmeanp"; version="1.0"; sha256="071ysgyi8daq8q1vqzgypkz4bgaxr0iw4djv906vkfx5ywihr768"; depends=[FMStable]; };
-  harrietr = derive2 { name="harrietr"; version="0.2.2"; sha256="1h6i9ls33h0dgncq6i33ig04yq7i1wy1cl1xx2nvbp78ig02klng"; depends=[ape dplyr ggplot2 ggtree lazyeval magrittr tidyr]; };
+  harrietr = derive2 { name="harrietr"; version="0.2.3"; sha256="0n6vsqysj4ijh06z6nqmj8x1z4w9711dxhbfp8p8fwi0l75pj0cj"; depends=[ape dplyr ggtree lazyeval magrittr rlang tidyr]; };
   harvestr = derive2 { name="harvestr"; version="0.7.1"; sha256="0xgxzbfbc33asfm8sl2y60ki6bwgd6vdh9nz466crkx7m9lsvll8"; depends=[digest foreach plyr]; };
   hash = derive2 { name="hash"; version="2.2.6"; sha256="0mkx59bmni3b283znvbndnkbar85fzavzdfgmwrhskidsqcz34yz"; depends=[]; };
   hashFunction = derive2 { name="hashFunction"; version="1.0"; sha256="1v57xj8xwv6xhxvgp0zxgvs5vcjw8z5k2ciwbn0jxf4ilyd66cgj"; depends=[]; };
@@ -6831,7 +6981,7 @@ in with self; {
   hashmap = derive2 { name="hashmap"; version="0.2.2"; sha256="1qypmyi033rjxjk055rv94qfqa99gm5hj5gfd9fiiq1xln3z700j"; depends=[BH Rcpp]; };
   hashr = derive2 { name="hashr"; version="0.1.0"; sha256="1ri2zz2l1rrc1qmpqamzw21d9y06c7yb3wr60izw81l8z4mmyc3a"; depends=[]; };
   hasseDiagram = derive2 { name="hasseDiagram"; version="0.1.3"; sha256="1r9z6jc9lbdj2xc81gpnbswrl8rhs8zrlsnypfrny40g3j402iap"; depends=[graph Rgraphviz]; };
-  haven = derive2 { name="haven"; version="1.1.0"; sha256="068x009dygwh8d3lg4i4p0h3lvzrk4bh78yh92y0lcjzjp8b97q8"; depends=[forcats hms Rcpp readr tibble]; };
+  haven = derive2 { name="haven"; version="1.1.1"; sha256="1fkcvsrnw8waqwggv0aydbvbi99x5kp9g78xfxj4w6s3xvdzcysz"; depends=[forcats hms Rcpp readr tibble]; };
   hawkes = derive2 { name="hawkes"; version="0.0-4"; sha256="1ghwq3icxwmrai3xn9r8cnvlh3z3j18lznhw1bm31h9mkkp2dk0a"; depends=[Rcpp RcppArmadillo]; };
   hazus = derive2 { name="hazus"; version="0.1"; sha256="1c0ahjdy9di1683nk5k4rmr6rhb66523ny039nyv842rgqdy625j"; depends=[reshape2]; };
   hbdct = derive2 { name="hbdct"; version="1.0.1"; sha256="1lmbhl757hdswfq3skwbwsgxpfgim8475d9hk511dbwrzcm6wsxr"; depends=[]; };
@@ -6844,27 +6994,26 @@ in with self; {
   hcp = derive2 { name="hcp"; version="0.1"; sha256="0hhcy70g13kclxv733kgiys7qn5bi28abpkli5n2vj0a58ac333m"; depends=[]; };
   hda = derive2 { name="hda"; version="0.2-14"; sha256="0azfxyws7yslcqplfddmdp5ngk91j5h7llvrg77yh5z0kkd09j1b"; depends=[e1071]; };
   hddplot = derive2 { name="hddplot"; version="0.57-5"; sha256="01ljwb4glignq78gpm3n8ap8ws1ss7ibdy7ybdvhnm5zj6nnvjpp"; depends=[MASS multtest]; };
-  hddtools = derive2 { name="hddtools"; version="0.7"; sha256="0acvdysyyv5i109adh1prrc9ifwadb0gk303hh3b0g69wysnmhl8"; depends=[gdata Hmisc raster RCurl rgdal rnrfa sp stringr tibble XML zoo]; };
   hdeco = derive2 { name="hdeco"; version="0.4.1"; sha256="04nggwckvn1kwi238qd33l4pryzn4aq5bmi30bvfi99gwnrlgfgq"; depends=[]; };
   hdf5r = derive2 { name="hdf5r"; version="1.0.0"; sha256="1s6p4cj909kc635fh5xpl87bqlcdj3dn3r1wk5g40abimk2b0pva"; depends=[bit64 R6]; };
   hdi = derive2 { name="hdi"; version="0.1-6"; sha256="1lzy4jcz14j1qi6z4j1sq7z3z75n8jygnzlvqjf45vn1sqil17cq"; depends=[glmnet linprog MASS scalreg]; };
   hdlm = derive2 { name="hdlm"; version="1.3.1"; sha256="1zl6bksw0apkmn5shf8qjpxjyx6vb40dc4m4db76hhn5nhcp10ic"; depends=[foreach glmnet iterators MASS Matrix]; };
-  hdm = derive2 { name="hdm"; version="0.2.0"; sha256="01zd3b44c0rnwxwxcmsgj7w0clq4h7wrlzy4yiwvxcifiv8mgp8l"; depends=[checkmate Formula ggplot2 glmnet MASS]; };
+  hdm = derive2 { name="hdm"; version="0.2.3"; sha256="0nj7pbkygzbiraw1b3pqv3bnkjhi1a0h48q0zgkcq8y79kj2f8cl"; depends=[checkmate Formula ggplot2 glmnet MASS]; };
   hdnom = derive2 { name="hdnom"; version="4.9"; sha256="11yzjfp6b4apn0nyqmi0qm5rd8xy49w6hwwiq7p566mxqy32i2j2"; depends=[foreach ggplot2 glmnet gridExtra ncvreg penalized rms survAUC survival]; };
   hdpca = derive2 { name="hdpca"; version="1.0.0"; sha256="1sv7caw4nhpcvsb7fxpvf2b5zskvfsv004hrqc51b5jx4fsc7y92"; depends=[boot lpSolve]; };
-  hdrcde = derive2 { name="hdrcde"; version="3.1"; sha256="027nxpzk1g0yx8rns7npdz30afs5hwpdqjiamc7yjrsi0rzm71lw"; depends=[ash KernSmooth ks locfit mvtnorm]; };
+  hdrcde = derive2 { name="hdrcde"; version="3.2"; sha256="1901mg2k2ch9fzn1n9k0kmxkgd1m4pxvrda7mv0mp64nf4mx43xw"; depends=[ash ggplot2 KernSmooth ks locfit RColorBrewer]; };
   hds = derive2 { name="hds"; version="0.8.1"; sha256="1smg5ixrl7f2x3wn7s5i26dyadn5sigpf4jsk236z1bhnz617ax4"; depends=[survival tensor]; };
-  healthcareai = derive2 { name="healthcareai"; version="1.2.0"; sha256="1piqbmx9w6aij8dkj80i0y9kryk5cmj3wb5gcgapasb4d09qkndp"; depends=[caret data_table DBI doParallel dplyr e1071 grpreg lme4 odbc pROC R6 ranger ROCR RSQLite xgboost]; };
+  healthcareai = derive2 { name="healthcareai"; version="1.2.4"; sha256="0ksanvwfdz8xdfqdkjb4i65q7x9jdrjl4z4qwsff16zfg6sj7q2c"; depends=[caret data_table DBI doParallel dplyr e1071 ggplot2 grpreg lme4 odbc pROC R6 ranger ROCR RSQLite xgboost]; };
   heatex = derive2 { name="heatex"; version="1.0"; sha256="0c7bxblq24m80yi24gmrqqlcw8jh0lb749adsh51yr6nzpap6i9n"; depends=[]; };
   heatmap_plus = derive2 { name="heatmap.plus"; version="1.3"; sha256="0rzffm15a51b7l55k0krk6w7v8czy3vpwz1qmbybr7av0pln7wn3"; depends=[]; };
   heatmap3 = derive2 { name="heatmap3"; version="1.1.1"; sha256="14zkij0gr9awzic71k2j7pniamkywfvwrifdk7jbds70zsi30ph5"; depends=[fastcluster]; };
   heatmapFit = derive2 { name="heatmapFit"; version="2.0.4"; sha256="1rswp1wp58f21fpyjybcvvmnn53kr54ij83hp05qbvl7yn1fsnrb"; depends=[]; };
-  heatmaply = derive2 { name="heatmaply"; version="0.13.0"; sha256="13m3w0894zalgxpdpz6mynn620cx0lrf4chp1bnki2c0lqwpk033"; depends=[assertthat colorspace dendextend ggplot2 gplots htmlwidgets magrittr plotly RColorBrewer reshape2 scales seriation viridis webshot]; };
-  heavy = derive2 { name="heavy"; version="0.38.1"; sha256="12s4g0m5qi4yg26p9l3qay1gfhixma66ls0kf8lkaswzgd7761hp"; depends=[]; };
+  heatmaply = derive2 { name="heatmaply"; version="0.14.1"; sha256="03p2caclhfgqgpx3wwck5h06jy3mxgs05gjmwkb7hmwghkjh41jc"; depends=[assertthat colorspace dendextend ggplot2 gplots htmlwidgets magrittr plotly RColorBrewer reshape2 scales seriation viridis webshot]; };
+  heavy = derive2 { name="heavy"; version="0.38.19"; sha256="15bg2qqkslkqfnsq3ixbgmq72xagh8laji0265l06xgf2l6045kx"; depends=[]; };
   heemod = derive2 { name="heemod"; version="0.9.2"; sha256="0qln5c4m11vxpsa0l07qrzs006b05hsl342pc5dgz0hwdpn5dd9j"; depends=[dplyr ggplot2 lazyeval memoise mvnfast plyr pryr tibble]; };
   hei = derive2 { name="hei"; version="0.1.0"; sha256="1cvwdkm5c9p3cfgpgdj0r7222mzz1jghq2i5f20xh3786gx05sqd"; depends=[nhanesA]; };
-  heims = derive2 { name="heims"; version="0.2.4"; sha256="07w5qy0fn7f2lz6zq52fxa2zgjfddga4p3x3c7rmq83jilhasppl"; depends=[bit64 data_table dplyr fastmatch fst lubridate magrittr]; };
-  helixvis = derive2 { name="helixvis"; version="0.1.0"; sha256="1ycvgjbcghbdaw65v3b81pxf33226lr4cbk5l943jg7m738qsfhd"; depends=[rJava]; };
+  heims = derive2 { name="heims"; version="0.4.0"; sha256="0vnq31jwn09grni4gdhf1hzd87b62as4f65b2qw7ky6mi38ahr5d"; depends=[bit64 data_table fastmatch hutils lubridate magrittr]; };
+  helixvis = derive2 { name="helixvis"; version="0.2.0"; sha256="02ypsh6qjbdcnvj4bh71ghc9igsp50sj2dvc0qvk6nlbdg7cfhlz"; depends=[rJava]; };
   hellno = derive2 { name="hellno"; version="0.0.1"; sha256="1j787rw9hh75bvkckmlz5xkgwc22gd7si3mgjd7v60dd6lykfa88"; depends=[]; };
   helloJavaWorld = derive2 { name="helloJavaWorld"; version="0.0-9"; sha256="1a8yxja54iqdy2k8bicrcx1y3rkgslas03is4v78yhbz42c9fi8s"; depends=[rJava]; };
   helsinki = derive2 { name="helsinki"; version="0.9.29"; sha256="0bn5iyxjn9qs6f0dmhv51ssayywbx1rayh80zbzk0gsm94nhs0d9"; depends=[maptools RCurl rjson sp]; };
@@ -6873,14 +7022,15 @@ in with self; {
   hergm = derive2 { name="hergm"; version="3.1-0"; sha256="17mxn2ff7yzj95vjsppvz7c9a5g6a2z9zyf34xvvxp9031zhrf46"; depends=[ergm latentnet mcgibbsit network sna]; };
   heritability = derive2 { name="heritability"; version="1.2"; sha256="18snrfsjj5jw5qicj92d5qch9v4ciqw1hbiwg6q8kfjka9nmqpma"; depends=[MASS]; };
   hermite = derive2 { name="hermite"; version="1.1.1"; sha256="0ns8l1rf346qxalfdwc7ny0kjp212f6qnnlgillpyvd8k29kg8iy"; depends=[maxLik]; };
+  hesim = derive2 { name="hesim"; version="0.1.0"; sha256="002phncl1glv3c3gwp9ifpk56j06rka26a3774xlj3zcs6izglns"; depends=[data_table Rcpp RcppArmadillo]; };
   het_test = derive2 { name="het.test"; version="0.1"; sha256="08kxp81dx32anh0k5b65x7w7madwnn9hiabdrk6ck6b6mx37x26v"; depends=[vars]; };
-  hetGP = derive2 { name="hetGP"; version="1.0.0"; sha256="0nf0r6i1ibwg4a1wnjbgwa2xda6lbrhny2f60zkc79igd60rjdnb"; depends=[DiceDesign MASS Rcpp]; };
+  hetGP = derive2 { name="hetGP"; version="1.0.2"; sha256="0dffkn11pm1x5jafc7yzy0jh4c2qqipfzhw205qiqxk5gny185k8"; depends=[DiceDesign MASS Rcpp]; };
   hetmeta = derive2 { name="hetmeta"; version="0.1.0"; sha256="023bdjsv0ibisz47vaap9yamzjna4hhndk3haw2g1cm92wnrdra5"; depends=[metafor]; };
   hett = derive2 { name="hett"; version="0.3-1"; sha256="1y0hr9g2pjwzc5azh095h33qidxhhmlvd1csamjnhwdphj5drzz0"; depends=[lattice MASS]; };
   heuristica = derive2 { name="heuristica"; version="1.0.1"; sha256="1myivlqw6a8wh97ma9lrpgvaqb0vn4kj8yp9r4z5vc4pxgmm48g6"; depends=[Hmisc]; };
-  hexSticker = derive2 { name="hexSticker"; version="0.4.1"; sha256="1qp2rlvmf1qjq3sydl1lmlx4a6wmgsx9ja1dwbrl31ldp40n223m"; depends=[ggimage ggplot2 gridGraphics hexbin showtext sysfonts]; };
+  hexSticker = derive2 { name="hexSticker"; version="0.4.2"; sha256="1dhxx8g1yv22wkzz4alpxrgg1rhribq70yxgpn01yq7jbhn2vyk0"; depends=[ggimage ggplot2 hexbin showtext sysfonts]; };
   hexView = derive2 { name="hexView"; version="0.3-3"; sha256="0cx5hl70sk1wk24na21vjyv50b2358z1plvvcw604qf1zij4icwn"; depends=[]; };
-  hexbin = derive2 { name="hexbin"; version="1.27.1"; sha256="0xi6fbf1fvyn2gffr052n3viibqzpr3603sgi4xaminbzja4syjh"; depends=[lattice]; };
+  hexbin = derive2 { name="hexbin"; version="1.27.2"; sha256="0lpfl0015lg5x7lvv9dr302bca22c7fs91pnd896ypgpzqg7pm26"; depends=[lattice]; };
   hextri = derive2 { name="hextri"; version="0.6"; sha256="05rvigi225npncbr1brc6apc7gsg9a5jzcbmhvflwp3hbcg3hn02"; depends=[FNN hexbin]; };
   hflights = derive2 { name="hflights"; version="0.1"; sha256="1rb6finck13i6949i6hsgfk90q4ybxh1m3is2mlw2m6087bpzfbd"; depends=[]; };
   hgam = derive2 { name="hgam"; version="0.1-2"; sha256="1flcc67n8kbh9m5phdfl587xg1x935zbp305y0gdmkc8vpkiwpcf"; depends=[grplasso lattice rgl]; };
@@ -6898,7 +7048,6 @@ in with self; {
   hierarchicalDS = derive2 { name="hierarchicalDS"; version="2.9"; sha256="0ckxy4pww5iik4m4kqs714f00g7lfzsarjdbpd0bcalvq4lmaal2"; depends=[coda ggplot2 Matrix mc2d mvtnorm rgeos truncnorm xtable]; };
   hierarchicalSets = derive2 { name="hierarchicalSets"; version="1.0.2"; sha256="0m5mnx1zmiscj0k1gnljr7fla4y1qhysi32a8q9jlah2q7grk7x9"; depends=[ggdendro ggplot2 gtable MASS Matrix RColorBrewer Rcpp scales]; };
   hierband = derive2 { name="hierband"; version="1.0"; sha256="0d95hrgkd8b5sww3wsgs6v9zg9pm71ick8x8kj8d6vyib350h6yn"; depends=[]; };
-  hierformR = derive2 { name="hierformR"; version="0.1.0"; sha256="0ym6i5ajp55mmk085slmma3g5xqgdk0d0gba28fdg3csxsxl9w1r"; depends=[igraph]; };
   hierfstat = derive2 { name="hierfstat"; version="0.04-22"; sha256="1fav2v2996v5kb1ffa6v5wxfm921syxg6as034vd3j4jfhdibyfx"; depends=[ade4 adegenet gtools]; };
   hiertest = derive2 { name="hiertest"; version="1.1"; sha256="17maf1w4vkqknxff3f00fzv136j3dbbigyzl4vq4sln9j27w10r3"; depends=[]; };
   highD2pop = derive2 { name="highD2pop"; version="1.0"; sha256="1s4v6m2d3vzvxsgmjzczv1zj3kv3ygvv6gbkkbjwsdhkvc1rdmf0"; depends=[fastclime]; };
@@ -6907,29 +7056,29 @@ in with self; {
   highcharter = derive2 { name="highcharter"; version="0.5.0"; sha256="1myypff80mxcgc3j0sflalhqz344c2zz2p90aarli1pbys9v8ynp"; depends=[assertthat broom dplyr htmltools htmlwidgets igraph jsonlite lubridate magrittr purrr quantmod rlist stringr tibble tidyr xts zoo]; };
   highfrequency = derive2 { name="highfrequency"; version="0.5.2"; sha256="1bjqjf4ki7r21mwlhrd83v8k6lknrypkl9wrax9ccr7fln7ha7wn"; depends=[BMS chron cubature FKF MASS mvtnorm numDeriv robustbase rugarch sandwich timeDate xts zoo]; };
   highlight = derive2 { name="highlight"; version="0.4.7.2"; sha256="0xc1akglgby3qd6c9y2rhcd0gpfihx5jvakji38vzlxb1m21sn10"; depends=[]; };
-  highlightHTML = derive2 { name="highlightHTML"; version="0.1.1"; sha256="0kjs01ml4v57956rk3ch8y8kxni36gymkf830skxh4fj4nsr8hs1"; depends=[]; };
+  highlightHTML = derive2 { name="highlightHTML"; version="0.2.1"; sha256="06k2idx9aadjd6xp6kadm9jh7ap1hwg7vh0bc8vw9ll82wcp1nv1"; depends=[]; };
   highmean = derive2 { name="highmean"; version="3.0"; sha256="1lq7z0l1737j4wvsy7951405afylyywp7vf2i7girzh459fdfzpc"; depends=[MASS mnormt mvtnorm]; };
   highr = derive2 { name="highr"; version="0.6"; sha256="0n9v44dxdy5fhkdmpbpa2p78whyd9z3rhhy42ipdz5m5vsr55qa3"; depends=[]; };
   highriskzone = derive2 { name="highriskzone"; version="1.4-2"; sha256="1q9y34nj73kg5y6qy4kb023vyzbdb0f6x23asq20bj5pmz2l25y1"; depends=[deldir fields ks Matrix mvtnorm rgeos spatstat]; };
   hillmakeR = derive2 { name="hillmakeR"; version="0.2"; sha256="1baynibgn4xqmpsxna8irggxvdc484mq5nza00rwg58vh1bc7wzq"; depends=[]; };
   hindexcalculator = derive2 { name="hindexcalculator"; version="1.0.0"; sha256="06b4dn629avmnyqxb0l39m00wz9cg9dddmm6qhgwgnzlxh14ifgk"; depends=[]; };
   hint = derive2 { name="hint"; version="0.1-1"; sha256="1n18j2hcb1qynhsln10nzryi20l5aqhr7i1aanww10y5dz573zi3"; depends=[]; };
-  hisemi = derive2 { name="hisemi"; version="1.1-0"; sha256="17qd0wzbap5gammaahyxg9lifznzzv65k8iqiyc8y1xw4ayq3cw7"; depends=[fda Iso Matrix]; };
   hisse = derive2 { name="hisse"; version="1.8.5"; sha256="1lhxj0cz3sdidpafll64fg1797y0472yxcr21dp2b83qbygkwfgl"; depends=[ape data_table deSolve GenSA nloptr phytools subplex]; };
   histmdl = derive2 { name="histmdl"; version="0.6-1"; sha256="0vgfy49hrjcm3f8l2hb0fbn1ydh94g4xq2s116yf2c9pd0pwsbi1"; depends=[]; };
   histogram = derive2 { name="histogram"; version="0.0-24"; sha256="1jihw92zi5a4dj6lzm1qvkynv9fp6j5iy83g8rzikp276x63nb62"; depends=[]; };
   historydata = derive2 { name="historydata"; version="0.1"; sha256="1h69x3iig542d43p9zm8x83p4dq48iwsw606j4fndnqhx99vzkw6"; depends=[]; };
+  histry = derive2 { name="histry"; version="0.1.2"; sha256="1m9zpqwzq7sqv4wpj2xxf0ndvz3cqk3bi8xq9n75z6b8q2lr74j8"; depends=[evaluate fastdigest]; };
   hit = derive2 { name="hit"; version="0.4.0"; sha256="1vyla7jlg61rlrmqjb1wya404xj90xys175h12qy30paxsl5icqz"; depends=[glmnet Rcpp speedglm]; };
   hitandrun = derive2 { name="hitandrun"; version="0.5-3"; sha256="0cmn8rzgksnygqwa5pngbdc6pds3kxx4y7mq3mg3xk1vys9b6r4n"; depends=[rcdd]; };
   hive = derive2 { name="hive"; version="0.2-0"; sha256="0ywakjphy67c4hwbh6prs4pgq5ifd8x8inxjkigjiqz6jx3z852v"; depends=[rJava XML]; };
-  hkclustering = derive2 { name="hkclustering"; version="1.0"; sha256="1xzzrvm847n1k2q2sg5dir5wgnix76arq4my211y8l0n1d5b2q38"; depends=[cluster]; };
+  hkclustering = derive2 { name="hkclustering"; version="1.0.1"; sha256="19syq06y5dl0mcwyaxr7w1hj8ffp5s140j72djcz0lljhskzmp6f"; depends=[cluster]; };
   hkevp = derive2 { name="hkevp"; version="1.1.4"; sha256="01m5yywi4vjnwhdayaqaqcp5lz70mllj5ifnwdb4c60wm9aby9pm"; depends=[Rcpp RcppArmadillo]; };
   hkex_api = derive2 { name="hkex.api"; version="0.1"; sha256="0hqwihlrppchpaz2yaq92gf779yi5k8n7sxy1kbpjxs2qc18xvj2"; depends=[httr RCurl XML]; };
   hmeasure = derive2 { name="hmeasure"; version="1.0"; sha256="0wr0xq956glmhvy4yis3qq7cfqv9x82ci9fzx3wjvaykd16h0sx9"; depends=[]; };
-  hmi = derive2 { name="hmi"; version="0.8.1"; sha256="03y8hb503q6ry3dk2vlanjdi3mp38fprpxxzm55rrvmhb6zac3l3"; depends=[boot coda linLIR lme4 lmtest MASS Matrix MCMCglmm mice msm mvtnorm nnet pbivnorm tmvtnorm]; };
+  hmi = derive2 { name="hmi"; version="0.9.5"; sha256="10ss4a8ywmmsxdsial1jxcydj1fg28qmbmxv9bhdw2zf1clacmbp"; depends=[boot coda linLIR lme4 lmtest MASS Matrix MCMCglmm mice msm mvtnorm nlme nnet ordinal pbivnorm tmvtnorm VGAM]; };
   hmm_discnp = derive2 { name="hmm.discnp"; version="0.2-4"; sha256="096flx2b9s66dasqj05zrkxsmg3lj6j5w0pwrw3b1qkpp9dvlrkb"; depends=[]; };
   hmmm = derive2 { name="hmmm"; version="1.0-3"; sha256="0yjx5i13jbv7vzxn84m6305124ri7jnym0bxbdj46s6l7lw025a9"; depends=[MASS mvtnorm quadprog]; };
-  hms = derive2 { name="hms"; version="0.4.0"; sha256="07sh75flp15lx2b00s3nxh04xr9gk4qhlbh125qx25isf71zw6zl"; depends=[pkgconfig rlang]; };
+  hms = derive2 { name="hms"; version="0.4.1"; sha256="0vr7k3a7k52a5yf67bwzl88lkjz09v1avw5axdk1y9v3nz33zl2h"; depends=[pkgconfig rlang]; };
   hnp = derive2 { name="hnp"; version="1.2-4"; sha256="14w2n95pgi5h71fag4ndrc82z7q26za99vj5z99rv19l5jkvmd46"; depends=[MASS]; };
   hoa = derive2 { name="hoa"; version="2.1.4"; sha256="15klcpmja4afwmpfxrxgrfis0vj7fil8k15jc3p0lqz3dhvq0dvf"; depends=[statmod survival]; };
   hoardeR = derive2 { name="hoardeR"; version="0.9.2"; sha256="0sss3ki2w0aqyp084pprycw8d8vgm60z41iq6g9nxhqhr9xy5kdw"; depends=[bamsignals Biostrings data_table GenomicRanges GenomicTools httr IRanges MASS R_utils RCurl Rsamtools seqinr stringr XML]; };
@@ -6939,12 +7088,12 @@ in with self; {
   homals = derive2 { name="homals"; version="1.0-6"; sha256="1xfpb6mxfk18ad2fggljr2g01gy4c290axc3vgwngmmimmcvh4cy"; depends=[ape rgl scatterplot3d]; };
   homeR = derive2 { name="homeR"; version="0.3.0"; sha256="0gi383392rs7snb2l9760vkws5hqfikyaj3i7cyby9g1sc2s6yx8"; depends=[]; };
   hommel = derive2 { name="hommel"; version="1.1"; sha256="1vrfw3zxj6hlfr5czrhmx67bjbd94whfgdmsdzlmdpmj0w5r0naz"; depends=[Rcpp]; };
+  homologene = derive2 { name="homologene"; version="1.1.68"; sha256="0i2ywr3rxryakp7qskgjc0pll9nskwngk5m2d2jikxxq2biqf5zj"; depends=[dplyr magrittr]; };
   homomorpheR = derive2 { name="homomorpheR"; version="0.2-1"; sha256="0qs4yimyfqx6rpxgh6h4z7vyb3qdxljnyvw1g8pxm4y75i0v6vz5"; depends=[gmp R6 sodium]; };
   homtest = derive2 { name="homtest"; version="1.0-5"; sha256="1lnqlg3dwq174ic6dbjllysw5fjy5kvvgbl6gvabjmcs66z27fp0"; depends=[]; };
   hopbyhop = derive2 { name="hopbyhop"; version="2.1"; sha256="0j4m1zz0ijf1kw2m12g7bww3418b8pyjvvrzkm8xcryjil2xfmim"; depends=[]; };
   horizon = derive2 { name="horizon"; version="1.0"; sha256="1wrp5qr1qql21xwcjh415q67z2ym4790zfp0n81360v6bp2b3hyy"; depends=[raster]; };
   hornpa = derive2 { name="hornpa"; version="1.0"; sha256="0pfvk2jkrwgvshgq9g55qijgpjh0677rpbya0r8759n92v3axbp4"; depends=[]; };
-  horserule = derive2 { name="horserule"; version="0.1.0"; sha256="1kswmzdb58fkwhm9l3v8qhkw0wkprhprkxhxzsc7c3znvcim6jni"; depends=[BayesLogit gbm ggplot2 inTrees MASS mvnfast randomForest RColorBrewer]; };
   horseshoe = derive2 { name="horseshoe"; version="0.1.0"; sha256="19khsr7gfcygqasjswvm0v0ddna1i1grfbhars8jlvybfawswhgx"; depends=[]; };
   hot_deck = derive2 { name="hot.deck"; version="1.1"; sha256="13pfgcyqaf5ik3pi8vgm06xmqli4hgslzlmhy1zi951anzdr49bd"; depends=[mice]; };
   hotspot = derive2 { name="hotspot"; version="1.0"; sha256="0a4w5d6rg324hd06lfwr1hxf6bwr10n55s3ynz5bpkh9c61yik3n"; depends=[]; };
@@ -6956,40 +7105,39 @@ in with self; {
   hqmisc = derive2 { name="hqmisc"; version="0.1-1"; sha256="0jcy2hb3dmzf9j4n92aq7247mx9w7n30wpsx0dkchqnjwlqwwncw"; depends=[]; };
   hqreg = derive2 { name="hqreg"; version="1.4"; sha256="1j6zp3rmpjx409vm7kq159mlawg87wsq0ypdkan34yxxv9py2jmi"; depends=[]; };
   hrbrthemes = derive2 { name="hrbrthemes"; version="0.1.0"; sha256="1hf4370hj80m6zr20236p9068g6ky0366gfk5l9hnj6l8jpmy9qa"; depends=[extrafont ggplot2 hunspell purrr scales stringi]; };
-  hrr = derive2 { name="hrr"; version="1.1.1"; sha256="17jzsgh2784y7jdwpa50v7qz99dw6k2n25sisnam6h1a39b96byn"; depends=[]; };
-  hsdar = derive2 { name="hsdar"; version="0.6.0"; sha256="03nz73yl662z01hj8yz6ss6hnps08wk21xvw2na4mksv8j03gqhz"; depends=[caret raster rgdal rootSolve signal]; };
+  hsdar = derive2 { name="hsdar"; version="0.7.0"; sha256="09yx8zc9qbf2kj8k76z9a6rhh5zy4ggsxvwhx35666phdml42dy0"; depends=[caret raster rgdal signal]; };
   hsicCCA = derive2 { name="hsicCCA"; version="1.0"; sha256="1d4lkjrihwhl3jrsj7250ccd90nfwpllyavc3mp15fhcy2jnjci8"; depends=[]; };
   hsm = derive2 { name="hsm"; version="0.1"; sha256="1dacsq2f23bz94rh4s3477hs38pbrpz2lis4s1l9im894bcbny1x"; depends=[]; };
   hsmm = derive2 { name="hsmm"; version="0.4"; sha256="1fh8c5kfv4brygdq6bfkrhrhkm99mxl4ljb1mhp9nf2bjlla11mc"; depends=[mvtnorm]; };
   hsphase = derive2 { name="hsphase"; version="2.0.1"; sha256="1z7yxbknldxn780dxw9xz984b3i8pj5hmdnbynvxc5k0ss8g7isy"; depends=[Rcpp RcppArmadillo snowfall]; };
   htdp = derive2 { name="htdp"; version="0.1.4"; sha256="0w579qp0p544xryb5r08m1nhqf7rmgv9q0lyx6my4av62l70ka5w"; depends=[Rcpp]; };
   htm2txt = derive2 { name="htm2txt"; version="2.1.1"; sha256="09q026yy8qm1fb3a4bf9vsp4j09kayl7xmk0p58ikar5l3bmfdjv"; depends=[]; };
-  htmlTable = derive2 { name="htmlTable"; version="1.9"; sha256="0ciic1f4iczq14j81fg7kxibn65sy8z1zxkvk1yxnxxg6dzplj2v"; depends=[checkmate htmlwidgets knitr magrittr stringr]; };
+  htmlTable = derive2 { name="htmlTable"; version="1.11.2"; sha256="1lbpi0kkk8b41w10scmlf27dg5azcv51a4q3p5bpqyphrnqp78k4"; depends=[checkmate htmltools htmlwidgets knitr magrittr rstudioapi stringr]; };
   htmltab = derive2 { name="htmltab"; version="0.7.1"; sha256="0lymagm7z6zn0ddygqxi831ikk74112lkqkbvs5j1djhmr359ajc"; depends=[httr XML]; };
   htmltidy = derive2 { name="htmltidy"; version="0.4.0"; sha256="090rj1fzdsa8m4g33d4mx92dm8afh173i4hqa4zym8c909jwh9qn"; depends=[htmltools htmlwidgets Rcpp XML xml2]; };
   htmltools = derive2 { name="htmltools"; version="0.3.6"; sha256="18k8r1s8sz1jy7dkz35n69wj20xhmllr53xmwb4pdzf2z61gpbs4"; depends=[digest Rcpp]; };
-  htmlwidgets = derive2 { name="htmlwidgets"; version="0.9"; sha256="0plqkfqys1ca3ki7sb7yc6gwjpi7yy4g3mzh7hfy8s6qri0vam0i"; depends=[htmltools jsonlite yaml]; };
+  htmlwidgets = derive2 { name="htmlwidgets"; version="1.0"; sha256="09lkmzh35l1420sg0dyh4vgyishqx3g8xmgs2y9z7lbi09xgwwwr"; depends=[htmltools jsonlite yaml]; };
   htree = derive2 { name="htree"; version="0.1.1"; sha256="1ns7yzzxapax5f355bpq81i581l1iwrfixp1k69n8mzsy106i988"; depends=[]; };
   hts = derive2 { name="hts"; version="5.1.4"; sha256="0n1gna2694yih5kaiw59crdlfcdfm9dqhjpkcwaskgrpmh08wnkd"; depends=[forecast Matrix matrixcalc Rcpp RcppEigen SparseM]; };
-  httk = derive2 { name="httk"; version="1.7"; sha256="1l29wpb03l7lk7y4lzjpxksr96jymg4sdvh7amd6068kdch0lqqp"; depends=[data_table deSolve msm mvtnorm survey truncnorm]; };
+  httk = derive2 { name="httk"; version="1.8"; sha256="1snwqqvacxgl4cyadx5la87xh4kxiqpdmyq4szqz5r1aq2sxrr03"; depends=[data_table deSolve msm mvtnorm survey truncnorm]; };
   httpRequest = derive2 { name="httpRequest"; version="0.0.10"; sha256="0f6mksy38p9nklsr44ki7a79df1f28jwn2jfyb6f9kbjzh98746j"; depends=[]; };
   httpcache = derive2 { name="httpcache"; version="1.1.0"; sha256="11hdc1jj2jbgvsps1h55azq0cr2fl556k631ns9k0747sjfmy2k9"; depends=[digest httr]; };
   httpcode = derive2 { name="httpcode"; version="0.2.0"; sha256="06k853ihwzkcx4z3jzazpb03p91frqkwz18jy4fwr8j2nwyqbhgv"; depends=[]; };
-  httping = derive2 { name="httping"; version="0.1.0"; sha256="1bhy5mh0hz83rjmvh7wl211nqkz58gxsgkwlkmjrdfzc2cparxjz"; depends=[httpcode httr jsonlite magrittr pryr]; };
-  httptest = derive2 { name="httptest"; version="2.3.4"; sha256="1r5pc6617k6jcgdrqxhm377arg6qbijps3p5ixa9vjma9iqiplar"; depends=[digest httr jsonlite testthat]; };
+  httping = derive2 { name="httping"; version="0.2.0"; sha256="0hdcf51yak8yagy4xj9cyck934lgmvpkd08jvlql33ir5mqvvv3i"; depends=[httpcode httr jsonlite magrittr pryr]; };
+  httptest = derive2 { name="httptest"; version="3.0.0"; sha256="1k75i84ajka0abc8x51w74dldb0z9i08dlqbkcdby25465k01l8r"; depends=[digest httr jsonlite testthat]; };
   httpuv = derive2 { name="httpuv"; version="1.3.5"; sha256="1sg4f223zfyd265b28rlhsn3b6mqflcpnmya98cjmjncmy9vjdj3"; depends=[Rcpp]; };
   httr = derive2 { name="httr"; version="1.3.1"; sha256="0n7jz2digbgv48rbr9vmzv4vmf4rahl9jjy31izs7sxj4rs4s4r2"; depends=[curl jsonlite mime openssl R6]; };
   hues = derive2 { name="hues"; version="0.1"; sha256="0b6y4ld242fqzx4ccxzk4i4zbx7myk7v3a03r0klgbh2mmw3ixm0"; depends=[colorspace]; };
   huge = derive2 { name="huge"; version="1.2.7"; sha256="134d951x42vy9dcmf155fbvik2934nh6qm2w5jlx3x2c6cf7faq4"; depends=[igraph lattice MASS Matrix]; };
   humanFormat = derive2 { name="humanFormat"; version="1.0"; sha256="0zwjbl8s5dx5d57sfmq6myc6snximc56zl88h8y1s1jqphyn9sir"; depends=[testthat]; };
   humaniformat = derive2 { name="humaniformat"; version="0.6.0"; sha256="0vaynjzz57pk4y1liag9lpn9jkag2033a6bkn28zzm7ndg3344l6"; depends=[Rcpp]; };
-  humarray = derive2 { name="humarray"; version="1.2"; sha256="16vy949dxrxjmgpsnn1mf1hcm1dn1a3507npxmsafp2yp65qxqhg"; depends=[BiocGenerics BiocInstaller biomaRt GenomeInfoDb GenomicFeatures GenomicRanges genoset IRanges NCmisc Rcpp reader rtracklayer S4Vectors]; };
+  humanleague = derive2 { name="humanleague"; version="2.0.2"; sha256="1svsqfqisywf0iqf3mrh4xnssvjmml6wn7l8iq5shvpmw71l4nnl"; depends=[curl Rcpp]; };
   humidity = derive2 { name="humidity"; version="0.1.1"; sha256="0ifxjz7216ld5c4kc9vs83fcijbg5i2z0mwfzszch9j1s734yc8y"; depends=[]; };
-  hunspell = derive2 { name="hunspell"; version="2.7"; sha256="16ma0xpgp06hwrbdcznb0nx4ab8c3mf802bnq13jf4l8vmb2lpif"; depends=[digest Rcpp]; };
+  hunspell = derive2 { name="hunspell"; version="2.9"; sha256="10186544s6nyd2ba470idxrxsl788dkmr1g1ri8x2n1lky9zmrik"; depends=[digest Rcpp]; };
   hurdlr = derive2 { name="hurdlr"; version="0.1"; sha256="1ryrqsxa07isxv2zx156bcn36d4yjvwpirb8jqcmqm97q7rmihmq"; depends=[]; };
   hurricaneexposure = derive2 { name="hurricaneexposure"; version="0.0.1"; sha256="1j6srqnmdhmg1yg06nqxapdrd9p3yrfs01z0sk43dvjq4dmwmrjr"; depends=[data_table dplyr ggmap ggplot2 lazyeval lubridate maps purrr RColorBrewer stringr tidyr]; };
-  hutils = derive2 { name="hutils"; version="0.9.0"; sha256="0251mwr35hlr6xsz9vm4cmq31ngmkn086f5ib6as9d0q8bgamfkg"; depends=[data_table fastmatch magrittr]; };
-  huxtable = derive2 { name="huxtable"; version="1.1.0"; sha256="1k0l2zzcm7b4vh4xi0z8gsj699byr7jzzfa5cbsm51mgqb8mkkqq"; depends=[dplyr glue htmltools knitr lazyeval rmarkdown tibble]; };
+  hutils = derive2 { name="hutils"; version="0.10.0"; sha256="0wic5s6k0pqsv41kpjwz6a48kh3ha0xw5y9zfa3zj4y7w8l2w94d"; depends=[data_table fastmatch magrittr]; };
+  huxtable = derive2 { name="huxtable"; version="2.0.2"; sha256="1qj83gcfg204gqjsd1vh32wd4p5jhfyf764vhapii6iswrddzv4d"; depends=[assertthat dplyr glue htmltools knitr lazyeval rmarkdown stringr tibble]; };
   hwde = derive2 { name="hwde"; version="0.67"; sha256="0wb2f9i5qi7w77ygh8bvydfpr7j5x8dyvnnhdkajaz0wdcpkyaqy"; depends=[]; };
   hwriter = derive2 { name="hwriter"; version="1.3.2"; sha256="0arjsz854rfkfqhgvpqbm9lfni97dcjs66isdsfvwfd2wz932dbb"; depends=[]; };
   hwwntest = derive2 { name="hwwntest"; version="1.3"; sha256="1b5wfbiwc542vlmn0l2aka75ss1673z8bcszfrlibg9wwqjxlwk5"; depends=[polynom wavethresh]; };
@@ -7001,14 +7149,16 @@ in with self; {
   hydroPSO = derive2 { name="hydroPSO"; version="0.3-4"; sha256="12md94g78m7m1np36sadx0wxpb149pn5gd8yj2kw7fphb8g6a218"; depends=[Hmisc lattice lhs sp zoo]; };
   hydroTSM = derive2 { name="hydroTSM"; version="0.5-1"; sha256="053id9ldr10mafww3vas9fiy16lz0n1mqqfg6wjsbm5r15jkz3ha"; depends=[automap e1071 gstat lattice maptools sp xts zoo]; };
   hydrogeo = derive2 { name="hydrogeo"; version="0.6-1"; sha256="16m6yvr9yhvb0vdh9pqd6gzf3h9km7gd89y6risjddv6g83469k8"; depends=[]; };
-  hydrolinks = derive2 { name="hydrolinks"; version="0.5"; sha256="1pc8jg14pf4mz93njnfd6x18k74w4s78xh63vwnnrf629njvwbfh"; depends=[dplyr httr rappdirs RSQLite sf sp units]; };
+  hydrolinks = derive2 { name="hydrolinks"; version="0.7.1"; sha256="1yghqn5wvwx2s1lqjh8pi051hki5f9glhaqnrnjlx4bbsirf3hv7"; depends=[dbplyr dplyr httr rappdirs RSQLite sf units]; };
+  hydroscoper = derive2 { name="hydroscoper"; version="0.1.0"; sha256="06w3rzdv0cjyk5pfx6ji1hkjf23pfd2z0aigyynj7ajbqfxmibna"; depends=[readr stringi stringr XML]; };
   hydrostats = derive2 { name="hydrostats"; version="0.2.5"; sha256="1n0wy8i1cfsgmqh898qi0qnqn4qx1srjvd05vmsf9qmhpnnyqw5m"; depends=[]; };
   hyfo = derive2 { name="hyfo"; version="1.3.9"; sha256="03f3irmhndwfnv4i121gwxb2yv1868pggzyr80pgp4969qzddacm"; depends=[data_table ggplot2 lmom maps maptools MASS moments ncdf4 plyr reshape2 rgdal rgeos zoo]; };
   hyper_fit = derive2 { name="hyper.fit"; version="1.0.3"; sha256="17f5i2i960796hl92y7ci9ffspway435r02kw1zk91lvfn927hng"; depends=[LaplacesDemon magicaxis MASS rgl]; };
   hyper2 = derive2 { name="hyper2"; version="1.0-1"; sha256="107cp6na0srqax42fmvcsrviy631hg6phqmkc0cxz1zdxxxw6442"; depends=[partitions Rcpp]; };
-  hyperSMURF = derive2 { name="hyperSMURF"; version="1.1.2"; sha256="1jlcfwyqs2mfdixqik5dqb0sl3i9pjxcrwabbcr24z8wnq524zx8"; depends=[doParallel foreach iterators randomForest unbalanced]; };
+  hyperSMURF = derive2 { name="hyperSMURF"; version="1.1.3"; sha256="0ayhq7w23azwjing2l4spfydmx7g615g3c5fm6fw1an660mzsgd2"; depends=[doParallel foreach iterators randomForest unbalanced]; };
   hyperSpec = derive2 { name="hyperSpec"; version="0.99-20171005"; sha256="0rhn9f4faxscwrip14ndymaddc5nfd6pyrhgwkwm8hf680wdrhbl"; depends=[ggplot2 lattice latticeExtra testthat]; };
-  hypergea = derive2 { name="hypergea"; version="1.3.3"; sha256="0spchrbb5y3yx63acs9ns256h7k3nd5wxg8vw258kqlvyapj50l6"; depends=[]; };
+  hypercube = derive2 { name="hypercube"; version="0.1.0"; sha256="0iv3cfs636mwijm2rjk427izf0gk5lh2fknd7bmb8pd188ckwqmf"; depends=[stringr]; };
+  hypergea = derive2 { name="hypergea"; version="1.3.6"; sha256="1k1525bkkj83j2nn9ixidb8vjvdmc4l9jvfarzgg532gg7wn3841"; depends=[]; };
   hypergeo = derive2 { name="hypergeo"; version="1.2-13"; sha256="13jdiy216znwhr91iqnh03mvkmyscw439syb3h4i67dd78sphnvd"; depends=[contfrac deSolve elliptic]; };
   hypersampleplan = derive2 { name="hypersampleplan"; version="0.1.1"; sha256="1sk3s1jm46ac4i7p433s3kyngj86kq2821zzhp30a3y8vi1j2psq"; depends=[]; };
   hypervolume = derive2 { name="hypervolume"; version="2.0.8"; sha256="003r5x9w5fvx2z8ysadx0bihz521ndizi14x8z69hvg5g74xwz84"; depends=[data_table e1071 fastcluster geometry hitandrun ks maps MASS mvtnorm pdist progress raster Rcpp RcppArmadillo rgeos rgl sp]; };
@@ -7016,11 +7166,10 @@ in with self; {
   hypoparsr = derive2 { name="hypoparsr"; version="0.1.0"; sha256="1bldiz5j6h9z499wwz8cbg5vshdmxgcd8qfxkz1a45q8b6nsd4vf"; depends=[data_tree readr RecordLinkage tibble]; };
   hypothesestest = derive2 { name="hypothesestest"; version="1.0"; sha256="0g8sm386m1zm9i3900r62x83wb600cy8hqk7dlvbx6wcgrxg82sm"; depends=[]; };
   hypothesisr = derive2 { name="hypothesisr"; version="0.1.1"; sha256="0z06risagphhvqiw4lrxy52q6q2yr10w2yxsm8iz1wh9ik097pcv"; depends=[dplyr httr jsonlite]; };
-  hysteresis = derive2 { name="hysteresis"; version="2.5"; sha256="1b1dd2367pjbg4jnn65l2jcj38ljz7adpdg8f5b9rj1rw7qgikfl"; depends=[car MASS msm]; };
+  hysteresis = derive2 { name="hysteresis"; version="2.6"; sha256="00v19m52bg2i3zg8p7yj56axzj9sm64qr61226p5h7sn0zrpws3b"; depends=[car MASS msm]; };
   hzar = derive2 { name="hzar"; version="0.2-5"; sha256="000l4ki3hvznnhkxc5j422h5ifnsfqalv666j48yby1hsf1lc3kg"; depends=[coda foreach MCMCpack]; };
   iBATCGH = derive2 { name="iBATCGH"; version="1.3"; sha256="0pnkkabzi57czcwd9i15nwv8ggwvyxmvn1wam7yrrrbvmi17lmrm"; depends=[msm Rcpp RcppArmadillo]; };
   iBST = derive2 { name="iBST"; version="1.0"; sha256="02p7lcr1wrf21v4568jc8hmjcijy3fnbv77s8nlhv2s4p0pgzh5x"; depends=[Rcpp rpart survival]; };
-  iBUGS = derive2 { name="iBUGS"; version="0.1.4"; sha256="0vsxy8pnbix0rg7ksgywx7kypqb5ngkxhldh3cisjkvdv638ybps"; depends=[gWidgetsRGtk2 R2WinBUGS]; };
   iC10 = derive2 { name="iC10"; version="1.1.3"; sha256="19dlrwj47zmdgmvzjfs5qa9fqq8g9ywhgy5mqbp99n7d9hg4ybxh"; depends=[iC10TrainingData pamr]; };
   iC10TrainingData = derive2 { name="iC10TrainingData"; version="1.0.1"; sha256="1x1kgxiib9l7whm2kmbv1s912hgpl7rdpqpn67nlkiswnr27hqn4"; depends=[]; };
   iClick = derive2 { name="iClick"; version="1.3"; sha256="052pjfxj11ay1yki89hdbbj550snppicmh8z85wlgf70amxhyq5k"; depends=[boot car coefplot fBasics forecast lattice lmtest lubridate openair papeR rugarch sandwich timeDate timeSeries]; };
@@ -7033,9 +7182,8 @@ in with self; {
   iGSEA = derive2 { name="iGSEA"; version="1.2"; sha256="1xlz8mbxqnrwyqj7jwma7vmvjlaccajbfxf3hi4wp5qs2pch8806"; depends=[]; };
   iGasso = derive2 { name="iGasso"; version="1.4"; sha256="17xxqncl5xcphdqclghcazygcgibf8ijdf4kkl3ga11xf70sahj2"; depends=[CompQuadForm lattice]; };
   iJRF = derive2 { name="iJRF"; version="1.1-4"; sha256="1fgbc0z647vwybffzp4iips86pxakd25dlk5jqgm049s6pa8m73v"; depends=[ggplot2]; };
-  iLaplace = derive2 { name="iLaplace"; version="1.1.0"; sha256="1z752yw3nvqj1ckf23262phkw849cb5p4m14v108xf2dizyzggxg"; depends=[doParallel fastGHQuad foreach iterators Rcpp RcppArmadillo]; };
+  iMRMC = derive2 { name="iMRMC"; version="1.1.0"; sha256="04wpqdds5vfqvl8n5g64vnyh4a40dxjh8l1bgw1vdz1372n0421g"; depends=[]; };
   iMediate = derive2 { name="iMediate"; version="0.4"; sha256="0pwvzd0k9m2jd7sizl436vs63rg9yinisrb0flz34yj5avn6rmb0"; depends=[mediation mvtnorm plotly]; };
-  iMessager = derive2 { name="iMessager"; version="1.0"; sha256="1w0l2qpcgglg13bnqdnz8xnfq2mxkk5g6cblvf2v5y03c2gpmm86"; depends=[]; };
   iNEXT = derive2 { name="iNEXT"; version="2.0.12"; sha256="1041r5k0k3kzik5vwyd62s4yc85lnnxbg5gbbl0kl629kikymb6y"; depends=[ggplot2 reshape2]; };
   iNOTE = derive2 { name="iNOTE"; version="1.0"; sha256="1969xmgfv9405r09zpd2icvjd9vvzw4dx5qaqxk1a0jvbvhp3h88"; depends=[CompQuadForm mixtools plyr]; };
   iNextPD = derive2 { name="iNextPD"; version="0.3.2"; sha256="06wka2qr1jm3hvi8j0b19fr21v72gmqknz8dg0l5wl91m0prqns3"; depends=[ade4 ggplot2 iNEXT Rcpp]; };
@@ -7056,7 +7204,7 @@ in with self; {
   ibmcraftr = derive2 { name="ibmcraftr"; version="1.0.0"; sha256="0zm5j0a1wjj5agibp38h73qxpq0njvrhfq3077xhhfizcb3v24sb"; depends=[Rcpp]; };
   ibmdbR = derive2 { name="ibmdbR"; version="1.49.0"; sha256="1rr64gwdy65njy0a52y3vncp7hlkp0mmq5ik92xbs49f4vagz58a"; depends=[arules ggplot2 MASS Matrix RODBC rpart rpart_plot]; };
   ibr = derive2 { name="ibr"; version="2.0-3"; sha256="1plyz4sl0i8qhk9dh3h7zvh9h8wqr589jvasmvp7r3slp4ndhp1r"; depends=[mgcv]; };
-  ic_infer = derive2 { name="ic.infer"; version="1.1-5"; sha256="0nmx7ijczzvrv1j4321g5g5nawzll8srf302grc39npvv1q17jyz"; depends=[boot kappalab mvtnorm quadprog]; };
+  ic_infer = derive2 { name="ic.infer"; version="1.1-6"; sha256="14vcwx5592br4zky9mq82akwk8pfiz7p1rx2jvyb48prrs2mm9gy"; depends=[boot kappalab mvtnorm quadprog]; };
   ic50 = derive2 { name="ic50"; version="1.4.2"; sha256="1a5ddmbdfr3ls132fvalbkh4yaawv9k58rgpy54s5qddrm6aas2s"; depends=[]; };
   icRSF = derive2 { name="icRSF"; version="1.1"; sha256="0yrlwf6p3k0i9vjm4zmf585cfv39ihchkyz9jfi4lzdh15msrzlx"; depends=[icensmis Rcpp]; };
   ica = derive2 { name="ica"; version="1.0-1"; sha256="1bkl4a72l0k6gm82l3jxnib898z20cw17zg81jj39l9dn65rlmcq"; depends=[]; };
@@ -7066,24 +7214,25 @@ in with self; {
   icarus = derive2 { name="icarus"; version="0.3.0"; sha256="1656bz0av59dpgndibn0bc5zr9zka9pmw7qmhjz2b956bh7sh4ag"; depends=[]; };
   iccbeta = derive2 { name="iccbeta"; version="1.1.0"; sha256="1xw0mz3ipkfz1jsjzwjnrm0af1gs31js7nvgy79cxqz31955zjww"; depends=[Rcpp RcppArmadillo]; };
   icd = derive2 { name="icd"; version="2.3.1"; sha256="15clnf5zbbqj4z5dgmx2wkn8jqmd8msryc555hk339d1662j41zd"; depends=[checkmate magrittr Rcpp testthat]; };
-  icd9 = derive2 { name="icd9"; version="1.3.1"; sha256="0yrgg1vf9jf0kv4qbvc0d8n26csxx79g2196ijgq43rhprrrm1y6"; depends=[checkmate fastmatch Rcpp]; };
   icdGLM = derive2 { name="icdGLM"; version="1.0.0"; sha256="1mh9kwn21n19v4lrmj33ghpna7dl66fx19gi6lcjanmrpzrkwdnz"; depends=[Matrix]; };
-  icenReg = derive2 { name="icenReg"; version="2.0.6"; sha256="0idkqknrv02kd8cmd2cdl24ykwc6bvh3c2fkd0v2sak2581qzyxq"; depends=[coda foreach MLEcens Rcpp RcppEigen survival]; };
+  icenReg = derive2 { name="icenReg"; version="2.0.7"; sha256="1fc6l3mqnm4rcg49bk2plfa011g7nay71gzd4nxnjisifmw6qi2s"; depends=[coda foreach MLEcens Rcpp RcppEigen survival]; };
   icensBKL = derive2 { name="icensBKL"; version="1.1"; sha256="12zx5x81jy48mp0l6a5ga0ikkjxvndv5cv2xf6d2lczfk7fz9lbp"; depends=[gtools Icens MASS mvtnorm smoothSurv survival TeachingDemos]; };
   icensmis = derive2 { name="icensmis"; version="1.3.1"; sha256="1c0j43wffb5h99chlj8j45lpan7dpn2i0r4rr6b2kq16p1zabfjw"; depends=[Rcpp]; };
-  icesAdvice = derive2 { name="icesAdvice"; version="1.3-1"; sha256="1afkb5f48f03l9hcjv7xgm6nindk4gn6f38k51pf31a7rxg0114x"; depends=[]; };
+  icesAdvice = derive2 { name="icesAdvice"; version="1.4-0"; sha256="0ra25g6am75qh32rfjps59x31zwav98k5d4nf6gbam98cr7vr5h3"; depends=[]; };
   icesDatras = derive2 { name="icesDatras"; version="1.2-0"; sha256="0arkn9ma03qb21sv5chmz5fj65da5ivqhvrg8bqibbky8zkix1vh"; depends=[]; };
   icesSAG = derive2 { name="icesSAG"; version="1.3-2"; sha256="1w3v10qjs9jyn7dp6vsv8hyax8mn2b8y5afba4lcpzh0p8d2yzpm"; depends=[httr icesVocab openssl png xml2]; };
-  icesTAF = derive2 { name="icesTAF"; version="1.4-0"; sha256="14rrs8b4vmf2dk64y2y5mpfdpwn66aj17rpyq9122pcdfk3sf649"; depends=[httr]; };
+  icesTAF = derive2 { name="icesTAF"; version="1.5-0"; sha256="19xg24k4fz64ki8mxf9g0r49syqh97a98dfb9zgiga3da3f2rk4w"; depends=[httr]; };
   icesVocab = derive2 { name="icesVocab"; version="1.1-2"; sha256="15ha2visv44pphkahg766afafh6467lwznvppwkvqjrbfiijkc6l"; depends=[XML]; };
   icmm = derive2 { name="icmm"; version="1.1"; sha256="1w9f1rniz67rrvq0akc64s5433ddmr2cgbcljil4c58yyz8hinx8"; depends=[EbayesThresh]; };
   icosa = derive2 { name="icosa"; version="0.9.81"; sha256="05gpiksncdi536f4py7szfi6myny1gqj8i0hsgpma7cfcm3npn0l"; depends=[igraph raster Rcpp rgdal rgl sp]; };
   icpsrdata = derive2 { name="icpsrdata"; version="0.3.0"; sha256="17sprbbi8fmvcp8d7hwrxl5amg0j036wq483cw62zbmni3p3fl82"; depends=[httr purrr rvest]; };
+  icr = derive2 { name="icr"; version="0.5.2"; sha256="1qmr6sc56v7ywy01f2mdhdxv2yp6rnwhbq347lfhb4ikhax3znpy"; depends=[ggplot2 Rcpp reshape2]; };
   icsw = derive2 { name="icsw"; version="0.9"; sha256="0lmq9l9sy0fz3yjj2sj8f19iy26913caibf7d9zb9w9n6cqskvlx"; depends=[]; };
   idar = derive2 { name="idar"; version="1.0"; sha256="1yfv3na4rcldkpzybf7la227z4ynsl1scrziirl5gp072k7zrs01"; depends=[ape FD picante spatstat]; };
   idbg = derive2 { name="idbg"; version="1.0"; sha256="1rxmj04hswxybrg7dfib3mjy8v8mdiv13zwbscp2q55z55hhf1m5"; depends=[]; };
   idbr = derive2 { name="idbr"; version="0.2"; sha256="1hhwn93arkzqs5ns9ll7rwqq5gyngixbicly9asw0dgjn12n5p7x"; depends=[countrycode dplyr httr jsonlite]; };
-  idefix = derive2 { name="idefix"; version="0.1.2"; sha256="00whk6w8mfh8z7l4lhb7c26yniq9a59ja1qfiy6dsxfdcbwdbcnd"; depends=[dplyr gtools MASS maxLik Rdpack scales]; };
+  idealstan = derive2 { name="idealstan"; version="0.2.7"; sha256="1818vwlv5cr6qyg7p6kgyb996n89d2xr4cy6ys9pdhrp7lip9prr"; depends=[bayesplot BH dplyr ggplot2 lazyeval Rcpp RcppEigen rlang rstan rstantools shinystan StanHeaders stringr tidyr]; };
+  idefix = derive2 { name="idefix"; version="0.2.4"; sha256="0j64pmccg01lscvjg9z97ypv3svl4jbvs4819jn4kc9ni6gq4fai"; depends=[dplyr gtools MASS maxLik Rdpack scales shiny]; };
   idem = derive2 { name="idem"; version="3.0"; sha256="15k6gk3v2hijdfabc1c2xabm5v84hgs0p9lpddrpir3h5jzilr3i"; depends=[BH Rcpp RcppEigen rstan sqldf StanHeaders survival]; };
   idendr0 = derive2 { name="idendr0"; version="1.5.3"; sha256="11c12d166bp2i498d8y6ipg5jhz1xsdsrmnhjqnrqqzp9avvrsjp"; depends=[tkrplot]; };
   identity = derive2 { name="identity"; version="0.2-1"; sha256="1j5wb5cj5j49in2g6r1shdm4ri4cfzj22hpqazvcmq4dm291sdi9"; depends=[]; };
@@ -7107,21 +7256,22 @@ in with self; {
   igraphdata = derive2 { name="igraphdata"; version="1.0.1"; sha256="19w5npa4b8c054v94xlr7nmhhg2fhq4m8jbds86skp8zvipl4rkl"; depends=[]; };
   igraphinshiny = derive2 { name="igraphinshiny"; version="0.1"; sha256="1ww5s4jfihzcx4k35lbhzsf54z720xh7b2p5alzk843m6rx77986"; depends=[igraph shiny]; };
   igraphtosonia = derive2 { name="igraphtosonia"; version="1.0"; sha256="0vy9jnpjp68l8s0hi1l57j9p41c543h3iqv16pwl550f38zqp8j6"; depends=[igraph]; };
-  iheatmapr = derive2 { name="iheatmapr"; version="0.4.2"; sha256="09zmmq157848wa5j055nwl0yvk81y7iv1ph6y379ssp56d8d85ff"; depends=[fastcluster ggdendro htmlwidgets jsonlite knitr magrittr plyr RColorBrewer S4Vectors scales]; };
+  iheatmapr = derive2 { name="iheatmapr"; version="0.4.3"; sha256="0124d7h8n83zb5kvvavccprlqknpqrd634zv7sz9s915xzhp7jgz"; depends=[fastcluster ggdendro htmlwidgets jsonlite knitr magrittr plyr RColorBrewer S4Vectors scales]; };
   ihs = derive2 { name="ihs"; version="1.0"; sha256="1c5c9l6kdalympb19nlgz1r9zq17575ivp3zrayb9p6w3fn2i06h"; depends=[maxLik]; };
+  ijtiff = derive2 { name="ijtiff"; version="0.3.0"; sha256="1c5pamxjmipgmqipnf0gg4yx7i0hjrb80c0mb2sjab4v05finz55"; depends=[checkmate fields filesstrings magrittr purrr Rcpp readr RSAGA stringr]; };
   iki_dataclim = derive2 { name="iki.dataclim"; version="1.0"; sha256="1yhvgr8d3j2r8y9c02rzcg80bz4cx58kzybm4rch78m0207wqs7p"; depends=[climdex_pcic lubridate PCICt zoo]; };
   ilc = derive2 { name="ilc"; version="1.0"; sha256="0hs0nxv7cd300mfxscgvcjag9f2igispcskfknb7sn7p8qvwr5ki"; depends=[date demography forecast rainbow survival]; };
   imPois = derive2 { name="imPois"; version="0.1.4"; sha256="07350zly4fyx2sf9cqpfpyy8l5kn96z49kzym81p2bmhq66d408h"; depends=[geometry rgl]; };
-  imageData = derive2 { name="imageData"; version="0.1-26"; sha256="0r39bp33kki2ddvds2jkpk1r6afl8d1xbl447lnz25dxpzfcajn2"; depends=[dae GGally ggplot2 Hmisc RColorBrewer reshape XLConnect]; };
+  imageData = derive2 { name="imageData"; version="0.1-41"; sha256="1rkkg9zzhkamql5y47kx9s8p7fnffgm7hgsdv85brj45gc441sfm"; depends=[dae GGally ggplot2 Hmisc RColorBrewer reshape XLConnect]; };
   imager = derive2 { name="imager"; version="0.40.2"; sha256="17awk431r37259c0yqs6c31kyiwhm9j80g2hw9hkk21jbi4jbghj"; depends=[Cairo downloader jpeg magrittr plyr png purrr Rcpp readbitmap stringr]; };
   imaginator = derive2 { name="imaginator"; version="0.1.1"; sha256="1xp5wsv570f1qy2fn99d8ijydmlapb6h6kinj07pilvv215dg93w"; depends=[assertthat dplyr lubridate magrittr stringi]; };
   imagine = derive2 { name="imagine"; version="1.3.1"; sha256="0sgzsyqqfi7rcs2xqxdc6f9kji09wsa38lxv7k2vymy3kdy8p9f6"; depends=[Rcpp]; };
-  imbalance = derive2 { name="imbalance"; version="0.1.1"; sha256="0905ah55ajhkyimcfdv03x0159330rrxb5m327g8w4wrxq3mj1p3"; depends=[bnlearn ggplot2 KernelKnn mvtnorm Rcpp RcppArmadillo]; };
+  imbalance = derive2 { name="imbalance"; version="1.0.0"; sha256="1pfhwf4844m0a8qsm852am63x18vlkbs6m1s9izrpd219616skpr"; depends=[bnlearn C50 FNN ggplot2 KernelKnn mvtnorm Rcpp RcppArmadillo smotefamily]; };
   imfr = derive2 { name="imfr"; version="0.1.5"; sha256="1f4zynra79h42dmd9qhg67wwvs7c640f5is98bq30fdphiybihgz"; depends=[dplyr httr jsonlite]; };
   imguR = derive2 { name="imguR"; version="1.0.3"; sha256="14f7ghgc8rbrpqb21rinfbrj1wh80i6ii0awwi814152v5qzj4b3"; depends=[httr jpeg png]; };
   immer = derive2 { name="immer"; version="0.8-5"; sha256="181mp407vy2ij35ggr1vi80y8ak6vyjplyvps1fdpxnanp1mqpw3"; depends=[CDM coda psychotools Rcpp RcppArmadillo sirt]; };
-  imp4p = derive2 { name="imp4p"; version="0.4"; sha256="1g5q6y8xxk9176172yvryfg6y33jnhvqicps8p7kljwq8k099dxn"; depends=[imputeLCMD Iso Rcpp truncnorm]; };
-  implyr = derive2 { name="implyr"; version="0.2.1"; sha256="0f9raar2amkbgk7hr7zdzwls3nlkrml73vdzjz2ycmfi521gsp9y"; depends=[assertthat DBI dbplyr dplyr rlang]; };
+  imp4p = derive2 { name="imp4p"; version="0.5"; sha256="0s1vq64qspni5fqzz781a1l8ldfbwhb57h8z4dr5k9bama5s3g6l"; depends=[imputeLCMD Iso Rcpp truncnorm]; };
+  implyr = derive2 { name="implyr"; version="0.2.2"; sha256="1kqz8pzgdbyvngsbab3v578jxm01hqmh2ipcqxsv1h9j628mvqj8"; depends=[assertthat DBI dbplyr dplyr rlang]; };
   r_import = derive2 { name="r_import"; version="1.1.0"; sha256="0blf9539rbfwcmw8zsb4k58slb4pdnc075v34vmyjw752fznhcji"; depends=[]; };
   importar = derive2 { name="importar"; version="0.1.1"; sha256="0xv445fmjhsbdlsq03k2rlycnggn3rcyq5a49zrg4jvjamzr0rgr"; depends=[]; };
   imprProbEst = derive2 { name="imprProbEst"; version="1.0.1"; sha256="09y8yd9sw0b79ca45ryi7p82vy5s8cx0gg603rlc39lgwcdv45i3"; depends=[inline lpSolve]; };
@@ -7139,24 +7289,25 @@ in with self; {
   inaparc = derive2 { name="inaparc"; version="0.2.0"; sha256="0rgbnvvqzbx4j40qz32l1bxmg3wwzbl6719wb9m3xpakblvhhxs2"; depends=[kpeaks lhs]; };
   inarmix = derive2 { name="inarmix"; version="0.4"; sha256="11a1vaxq22d5lab07jp5pw0znkaqj6bmkn6vsx62y6m4mmqk04yr"; depends=[Matrix Rcpp]; };
   inbreedR = derive2 { name="inbreedR"; version="0.3.2"; sha256="09fr13ckyn2skiigkn4qdx5g080gcmyyrvzhcp0wrml9wpmy0h4z"; depends=[data_table]; };
-  incR = derive2 { name="incR"; version="1.0.1"; sha256="13yx5a142am8hhj9qbg47fhdn07mhq57zn0awsmsfv8xz1g80hpx"; depends=[dplyr lubridate maptools rgeos]; };
-  inca = derive2 { name="inca"; version="0.0.2"; sha256="1wj8f1ga0km9k9zrjcd7g228kw2pp6y6pgnfwmgdd05bx4hzjhdw"; depends=[Matrix Rcpp RcppArmadillo]; };
+  incR = derive2 { name="incR"; version="1.0.2"; sha256="07v0jg3cw04qnblpr3zslfwxw8ng444f5545q4yznnbdw8wfmk8x"; depends=[dplyr lubridate maptools rgeos]; };
+  inca = derive2 { name="inca"; version="0.0.3"; sha256="1g9js84xa5b6jl8gp4k0c55kjazfaw5g9biwk4v6vz3vwkwayyzh"; depends=[Matrix Rcpp RcppArmadillo]; };
   incadata = derive2 { name="incadata"; version="0.6.1"; sha256="05i0zifdzc1w6p6annhzp9rdd4v82gx2sxi4lqpdnraaczdrhgbb"; depends=[backports decoder dplyr rccmisc rvest sweidnumbr xml2]; };
   incgraph = derive2 { name="incgraph"; version="1.0.1"; sha256="0zjvxk2krdlm5bcr0m80nxy46f69a1xadfjw5sjw249b28wdclml"; depends=[BH dplyr orca purrr Rcpp testthat tibble]; };
   incidence = derive2 { name="incidence"; version="1.2.1"; sha256="0fjbccsyrxjmc17kzqhh1ykx1ai6a8gmbxsjr42crm8bjpnq77iy"; depends=[ggplot2 ISOweek]; };
-  inctools = derive2 { name="inctools"; version="1.0.10"; sha256="0ykkxlifh9gxflbk9786xbx2i5ja3pn01z9dj8dqwvrrq83npcfw"; depends=[cubature doParallel dplyr foreach ggplot2 glm2 magrittr MASS plyr pracma]; };
-  indelmiss = derive2 { name="indelmiss"; version="1.0.7"; sha256="1pm1yl7kbxrik5ghvsvp6irmzgawxb8v03kvrqm48mnbghkdh1lv"; depends=[ape numDeriv phangorn Rcpp]; };
+  inctools = derive2 { name="inctools"; version="1.0.11"; sha256="08a1aqsx1f1mkykpgbqbgvai60zxj9zwpmxynyajbm4lwr3rc6rp"; depends=[cubature doParallel dplyr foreach ggplot2 glm2 magrittr plyr pracma tmvtnorm]; };
+  indelmiss = derive2 { name="indelmiss"; version="1.0.8"; sha256="0674hvgdq0fxab3h55iililphrr6lqp25359crvkqqgb8higbs0h"; depends=[ape numDeriv phangorn Rcpp]; };
   indicspecies = derive2 { name="indicspecies"; version="1.7.6"; sha256="0a7s37k3bg4cnzkvn833nrwi6hnfa5f6jxa8ra954v4sp55g6i5d"; depends=[permute]; };
   inegiR = derive2 { name="inegiR"; version="1.2.0"; sha256="14mpjyc85l9sznhn29cxk37l3y5yxclqiv2kgcwf8prpxfgwy83l"; depends=[jsonlite plyr XML zoo]; };
   ineq = derive2 { name="ineq"; version="0.2-13"; sha256="09fsxyrh0j7mwmb5hkhmrzgcy7kf85jxkh7zlwpgqgcsyl1n91z0"; depends=[]; };
+  infer = derive2 { name="infer"; version="0.1.1"; sha256="1ln2vw4d4xcy9g6cv594glrrcqwmjynv0mfq6nsl1h94gz8wnh8a"; depends=[assertive dplyr ggplot2 magrittr rlang tibble]; };
   inference = derive2 { name="inference"; version="0.1.0"; sha256="0j92isfkbhk13yx2hd3a5dd7ikcbgjc04zisd1n5kmg6ajw2aj6r"; depends=[sandwich]; };
   inferference = derive2 { name="inferference"; version="1.0.0"; sha256="1x6i8ycba9z57m1n143p1j9pmlfrhjhi4iw0fsny8xmcvqrlr85p"; depends=[Formula lme4 numDeriv]; };
-  inferr = derive2 { name="inferr"; version="0.1.1"; sha256="148n1dwfjzzcahsqy9s3wlgpf9p6jpcn692j7dvyaw6rdk3bq1i3"; depends=[dplyr magrittr purrr Rcpp tibble tidyr]; };
+  inferr = derive2 { name="inferr"; version="0.3.0"; sha256="1z5bfq0gv1h6iw8nwc19ar6f2sgsvgs3ghq52s09wclqk2yy4azz"; depends=[dplyr magrittr purrr Rcpp rlang shiny tibble tidyr]; };
   inflection = derive2 { name="inflection"; version="1.3"; sha256="168ms6hfakr6wql45r9qvk7hpas6sgpaiqyxicihsq0j3dpzvys4"; depends=[]; };
   influence_ME = derive2 { name="influence.ME"; version="0.9-9"; sha256="0f6d2hvs9qllyfpsp2cgh7w8yjxafclbk47n8av7j9zpp7s5yg9v"; depends=[lattice lme4 Matrix]; };
   influence_SEM = derive2 { name="influence.SEM"; version="2.1"; sha256="1qhv640lngwrbdfqvw2x0x4zwv0aqzxwyfdpnivzjf5pw58nya5s"; depends=[lavaan]; };
   influenceR = derive2 { name="influenceR"; version="0.1.0"; sha256="12p9362hkndlnz1rd8j2rykg57kbm6l7ks60by3rd25xg50k5jag"; depends=[igraph Matrix]; };
-  influxdbr = derive2 { name="influxdbr"; version="0.14.0"; sha256="1my5c7f04w5r0kvi0hw41k5x00s0pgkfmqvwxijpggld2c2rman9"; depends=[dplyr httr jsonlite magrittr purrr rlang tibble tidyr xts zoo]; };
+  influxdbr = derive2 { name="influxdbr"; version="0.14.2"; sha256="03dzw86mvbc8w38q9skjki1z17vc04k9q8dx7sd3xg6xbr10f9d9"; depends=[dplyr httr jsonlite magrittr purrr rlang tibble tidyr xts zoo]; };
   infoDecompuTE = derive2 { name="infoDecompuTE"; version="0.6.0"; sha256="1gmsf4gw6xf70sh7y5hagkavknp80293sb7wgx6lycngq2acmi4w"; depends=[MASS]; };
   informR = derive2 { name="informR"; version="1.0-5"; sha256="16pz47wlr1gr8z5hdnrjpczm967khqiqgdfiw15a0bby6qdvni2y"; depends=[abind relevent]; };
   infotheo = derive2 { name="infotheo"; version="1.2.0"; sha256="18xacczfq3z3xpy434js4nf3l19lczngzd0lq26wh22pvg1yniwv"; depends=[]; };
@@ -7166,11 +7317,11 @@ in with self; {
   infutil = derive2 { name="infutil"; version="1.0"; sha256="02d0hfbkdqjj0lm1fzwwxy60831kbcjn2m4rfblpib0krkbpz72n"; depends=[ltm]; };
   ini = derive2 { name="ini"; version="0.3.0"; sha256="0ybqklgbij69dvq8dxl8z2mb9fhdizcdcm9b5hg5n1x20ph3vbyj"; depends=[]; };
   injectoR = derive2 { name="injectoR"; version="0.2.4"; sha256="0sa32cspp6y3m04yfmd02kxx55mk7l9jxf4r9pk1a6k3sqnj6fl8"; depends=[]; };
-  inlabru = derive2 { name="inlabru"; version="2.1.2"; sha256="0xv9mc4xp7b8b8xnaislqblybkdxx1px16jqf6m2vi5ir5s5j9di"; depends=[ggplot2 rgdal rgeos sp]; };
+  inlabru = derive2 { name="inlabru"; version="2.1.3"; sha256="09sdbzg3cdg43clkwnahkhyns019gjya55m6zhq340mgrnirx2i5"; depends=[ggplot2 rgdal rgeos sp]; };
   inline = derive2 { name="inline"; version="0.3.14"; sha256="0cf9vya9h4znwgp6s1nayqqmh6mwyw7jl0isk1nx4j2ijszxcd7x"; depends=[]; };
   inlinedocs = derive2 { name="inlinedocs"; version="2013.9.3"; sha256="13vk6v9723wlfv1z5fxmvxfqhaj68h0x3s2qq9j6ickr4wakb4ar"; depends=[]; };
   inlmisc = derive2 { name="inlmisc"; version="0.3.5"; sha256="0m215fgyh17nbp2cqmyism3i77rgqkpdggc6fnpn3njxgw7wyb9m"; depends=[checkmate dplyr GA htmlwidgets igraph knitr leaflet raster rgdal rgeos sp]; };
-  inpdfr = derive2 { name="inpdfr"; version="0.1.5"; sha256="161p45hj5h6yxn9w140gkcsj2y90lqc8avsj2dsg3gnzyks07as1"; depends=[ca cluster entropart metacom R_devices RColorBrewer RGtk2 SnowballC stringi tm wordcloud]; };
+  inpdfr = derive2 { name="inpdfr"; version="0.1.6"; sha256="0fwznjsq4wccqfnb3a5ic1nyx538jxmlcv59xdz06y6raczjp9q9"; depends=[ca cluster entropart metacom R_devices RColorBrewer SnowballC stringi tm wordcloud]; };
   insideRODE = derive2 { name="insideRODE"; version="2.0"; sha256="1ffndk8761cpkririb3g1qsq9nwmh82lcrpql9i5fksdprvdjzcw"; depends=[deSolve lattice nlme]; };
   insol = derive2 { name="insol"; version="1.1.1"; sha256="0zbawkp4qb0kqb7y9ibiyy8sa9rfgbzwmcdswx6s87p0h7brrqn6"; depends=[]; };
   inspectr = derive2 { name="inspectr"; version="1.0.0"; sha256="04rpr5ajpdx1d49y327dryxwxk27yljj4c96i9qglf02i9kmplkg"; depends=[openxlsx]; };
@@ -7193,7 +7344,7 @@ in with self; {
   intergraph = derive2 { name="intergraph"; version="2.0-2"; sha256="1ipxdrfxhcxhcbqvrzqh3impwk4xryqlqlgjl7f2mwrf365zs6ph"; depends=[igraph network]; };
   interim = derive2 { name="interim"; version="0.7.0"; sha256="05hgypckfjb9pr60cv6m8lgqibdkgksw13gy8g1rmd9njs6qcb8i"; depends=[]; };
   internetarchive = derive2 { name="internetarchive"; version="0.1.6"; sha256="1cx9dxlrdz1xak4jrrjs2wsq6ml8n2xl0n0s6n9h3g247j4lfvnm"; depends=[dplyr httr]; };
-  interp = derive2 { name="interp"; version="1.0-29"; sha256="08f8hg6jcz4k0fsj6sjdki3v3h6fl4597s5r7vm55mnnnzqqlaly"; depends=[deldir Rcpp RcppEigen]; };
+  interp = derive2 { name="interp"; version="1.0-30"; sha256="1gzxh0xz0zdw5fr9m4w4w99rg540bljwkcmlla4pc0974d6fcg6i"; depends=[deldir Rcpp RcppEigen]; };
   interplot = derive2 { name="interplot"; version="0.1.5"; sha256="0svhs7mj987vravirhmp4788qvqm32v614qj7q06b2y4va477yj8"; depends=[abind arm dplyr ggplot2]; };
   interpretR = derive2 { name="interpretR"; version="0.2.4"; sha256="0nfh3pyr7nn0r41xk0mfb4fs5rjkbh43lbw14x7pdmbgzpgsc22c"; depends=[AUC randomForest]; };
   interval = derive2 { name="interval"; version="1.1-0.1"; sha256="1lln9jkli28i4wivwzqrsxvv2n15560f7msjy5gssrm45vxrxms8"; depends=[Icens MLEcens perm survival]; };
@@ -7205,40 +7356,41 @@ in with self; {
   intrval = derive2 { name="intrval"; version="0.1-1"; sha256="1p66cjpn43xib7rrnyv3jqr6bb49d3dxf888p8hxnr7kx9wfalkn"; depends=[]; };
   intsvy = derive2 { name="intsvy"; version="2.1"; sha256="0fsib9w1zvg3phmzrspdc3d44rl5p222j0j9xmdhpcq9r6sy0bp9"; depends=[foreign ggplot2 Hmisc memisc plyr reshape]; };
   intubate = derive2 { name="intubate"; version="1.0.0"; sha256="03ikqwai7wdahdfyzdy42xs8qpdhl9gmbak2qd82yxjl62956i8c"; depends=[]; };
-  inum = derive2 { name="inum"; version="0.9-2"; sha256="0bqk9hh3ps0ria52fh3xfpis9wazh04fj9bbdd3ydj7inwj2lxxs"; depends=[]; };
+  inum = derive2 { name="inum"; version="1.0-0"; sha256="1b013ak4d0iiwk5a0s7vvsl34d0hs881iq7zrvah4skb89x82cpm"; depends=[libcoin]; };
   invGauss = derive2 { name="invGauss"; version="1.1"; sha256="0l93pk2sh74dd6a6f3970nval5p29sz47ynzqnphx0wl3yfmmg9c"; depends=[optimx survival]; };
   invLT = derive2 { name="invLT"; version="0.2.1"; sha256="0dcr2cclgzkvsw1lysmjrkwgahas96rjc328yc7a1a56pf62kw2v"; depends=[]; };
   investr = derive2 { name="investr"; version="1.4.0"; sha256="0l47bfwxssfr3maprkpwnmgxnxccl3ch4grc7f968iiqk83mcxw9"; depends=[nlme]; };
   invgamma = derive2 { name="invgamma"; version="1.1"; sha256="12ga2y4wc9bc5zz6vimvxwgjpsx3ys3209nq63gscbw559ydxa5a"; depends=[]; };
-  io = derive2 { name="io"; version="0.2.4"; sha256="1y2va6hcsdzsak6ljgj4sxin5zfr4azrqc8b9qlxcaajyyji2crx"; depends=[filenamer stringr]; };
-  ioncopy = derive2 { name="ioncopy"; version="1.0"; sha256="1idk899zxvpvnswdwlpkhy5v8id6xmrbp6hg4rmrlpp3wfxw3ad5"; depends=[multtest]; };
+  io = derive2 { name="io"; version="0.3.0"; sha256="16mnbxq217ixfg2qfqrj97qqfpc5dj622hf80nwray6hp47lbw2s"; depends=[filenamer stringr]; };
+  ioncopy = derive2 { name="ioncopy"; version="2.0.1"; sha256="1iy4a894yp91f7sm89hvr9sh69abjrygx4yaks1d405vbfxa6z58"; depends=[multtest shiny]; };
   ionflows = derive2 { name="ionflows"; version="1.1"; sha256="1k9yz82hbjwljyg4cmi675ppykrc2yq9md8x1hhkfxmp070whcxl"; depends=[Biostrings]; };
   ionicons = derive2 { name="ionicons"; version="0.1.1"; sha256="0v7icjx2bpb0hd3j8a14lijklyjkmw7qgp336z66wzscm6f411ip"; depends=[png rsvg xml2]; };
   ionr = derive2 { name="ionr"; version="0.3.0"; sha256="18rv5n5gihb6pz36s45yj17sdjsbj4485k4lnggdjj1gbbjkz2ni"; depends=[gplots psych]; };
   iopsych = derive2 { name="iopsych"; version="0.90.1"; sha256="0adxwxnb1zdlld3icdggx7cq6cp8z4h1jf105485w322a8c6s9ik"; depends=[mco mvtnorm]; };
   iosmooth = derive2 { name="iosmooth"; version="0.94"; sha256="06xgzhjgb6pznjzfli193q7kn8sh5jmqsssgymwj98bw7iwn4q3z"; depends=[]; };
-  iotools = derive2 { name="iotools"; version="0.1-12"; sha256="1b2crnhx84h1gp10sy2mkhi9vylp9z97ld16jijddzlf4v23bmlx"; depends=[]; };
+  iotables = derive2 { name="iotables"; version="0.2.4"; sha256="17xw0xjj6xy99f41ln043agaqcw6q3s0i99as06471kyscgan8n7"; depends=[dplyr eurostat forcats magrittr plyr tidyr]; };
+  iotools = derive2 { name="iotools"; version="0.2-5"; sha256="0rn6kvlcijnhlwajh6nmi80qlamxgz0x3pn09yp4hyfpl3zxg1fz"; depends=[]; };
   ipdmeta = derive2 { name="ipdmeta"; version="2.4"; sha256="0k9wqpmrvqdh73brmdzv86a2dbyddjyyyqzqgp1vqb3k48k009s2"; depends=[nlme]; };
   ipdw = derive2 { name="ipdw"; version="0.2-6"; sha256="1jfixvywxdhnpqz62ld2c8n6yacg88q3y1n1aisqqb7szz0zf23z"; depends=[gdistance raster sp]; };
   ipflasso = derive2 { name="ipflasso"; version="0.1"; sha256="12cyn7wpkrjqrjccb26mi375ijqplps4216ldj7w3az9g8pzihv3"; depends=[glmnet survival]; };
   ipfp = derive2 { name="ipfp"; version="1.0.1"; sha256="12aklhf9p70r9b2wi0qgbl835b4lil805c31n1ka4kdix4b4cpr4"; depends=[]; };
-  ipft = derive2 { name="ipft"; version="0.7.1"; sha256="1vprm3dlfh5bqn3hk5sdx2d8qdagn1a3crg8s9w1jykp7ivnahac"; depends=[apcluster cluster dplyr ggplot2 Rcpp]; };
+  ipft = derive2 { name="ipft"; version="0.7.2"; sha256="0jifmkwac5yfl110200ljm3pas3321j068af9xqzqs0av20m8hps"; depends=[apcluster cluster dplyr ggplot2 Rcpp]; };
   iplots = derive2 { name="iplots"; version="1.1-7"; sha256="052n8jdhj8gy72xlr23dwd5gqycqnph7s1djg1cdx2f05iy693y6"; depends=[png rJava]; };
   ipred = derive2 { name="ipred"; version="0.9-6"; sha256="1vrw1pqcpnc04x1r2h9grdfm6bivs358sww5gg90jwlvxcw69lxq"; depends=[class MASS nnet prodlim rpart survival]; };
-  iprior = derive2 { name="iprior"; version="0.7.0"; sha256="17z0b7xrcmihd1lkbzv8g1yqn886gqbckasjxivk377033w6f1nq"; depends=[doSNOW foreach ggplot2 mvtnorm Rcpp RcppEigen reshape2 scales]; };
+  iprior = derive2 { name="iprior"; version="0.7.1"; sha256="01sav9594grc413kf6s9jnp4hs4q9f9424qphm91xckydiqisaav"; depends=[doSNOW foreach ggplot2 mvtnorm Rcpp RcppEigen reshape2 scales]; };
   ips = derive2 { name="ips"; version="0.0-7"; sha256="0r4394xbchv6czad9jz4ijnfz8ss3wfdvh7ixrdxic2xrw0ic90v"; depends=[ape colorspace XML]; };
   iptools = derive2 { name="iptools"; version="0.4.0"; sha256="0c3j5sl129xl75p14qr880ll1y3yss3zqg39zbj2jp6wcv9rvafx"; depends=[AsioHeaders BH ISOcodes Rcpp]; };
-  ipumsr = derive2 { name="ipumsr"; version="0.1.0"; sha256="0n66xb7hp9qyq40mn5xsapkbs4m257kmpyy7lwba3ycs82zg6wxh"; depends=[dplyr haven purrr raster Rcpp readr rlang stringr tibble tidyr xml2]; };
+  ipumsr = derive2 { name="ipumsr"; version="0.1.1"; sha256="0bms1jl1hwqcz6awdgs0wpxvxgsydrvfmp10qnhglh52nckf0dyb"; depends=[dplyr haven purrr raster Rcpp readr rlang stringr tibble tidyr xml2]; };
   ipw = derive2 { name="ipw"; version="1.0-11"; sha256="11a34j6lp329ran2r9kxn8184kfmibkdig74lsy6lj4w4w0d71cm"; depends=[geepack MASS nnet survival]; };
   iqLearn = derive2 { name="iqLearn"; version="1.4"; sha256="0vgnfr6x6f6qlnag63brnkdymlmm2vbkl8fg02w98qsc48lal454"; depends=[]; };
   iqspr = derive2 { name="iqspr"; version="2.3"; sha256="190d0mc36l3ggh62km3z7ylhi9f0wp4brkwmm72qjqbm1przvk0w"; depends=[doParallel fingerprint ggplot2 glmnet gridExtra kernlab ranger rBayesianOptimization rcdk tictoc xgboost]; };
   irace = derive2 { name="irace"; version="2.4"; sha256="07xzg4jcq0rjdq1drs3xh02y29z1gmkjkw54apmaqzc0s1pwzkk4"; depends=[]; };
   ircor = derive2 { name="ircor"; version="1.0"; sha256="07apa4l4ib11xw25d44b403s3la29sqlid13q41hjrlfxafm91ld"; depends=[]; };
-  irlba = derive2 { name="irlba"; version="2.3.1"; sha256="1dclzzkm75sbbqda5scj2hlqnw2sksgxbiqagxs4359fwfszi0k0"; depends=[Matrix]; };
+  irlba = derive2 { name="irlba"; version="2.3.2"; sha256="0f7wb12wa0zbyllk5adcf4f517wgjpkhsx4j176i9ax6xy7jvprz"; depends=[Matrix]; };
   irr = derive2 { name="irr"; version="0.84"; sha256="0njxackqj8hyf9j1yszwxbnaxgp27fc2bwyyf7dip72wc12f81n5"; depends=[lpSolve]; };
-  irtDemo = derive2 { name="irtDemo"; version="0.1.2"; sha256="1kbab06lwldyp5ra71rgn4habq6yl6ggl5km1sj9bbqa6n4gqvwz"; depends=[fGarch shiny shinydashboard]; };
+  irtDemo = derive2 { name="irtDemo"; version="0.1.3"; sha256="057m8p6qnws09kbq30712hfqkdyqkshpc4vprmj65mrdx6kwvqr7"; depends=[fGarch shiny shinydashboard]; };
   irtProb = derive2 { name="irtProb"; version="1.2"; sha256="12wnvbzkh0mx9i3iyh1v2n2f2wjsjj7ad3dgv9xj949x4nbz16j0"; depends=[lattice moments]; };
-  irtoys = derive2 { name="irtoys"; version="0.2.0"; sha256="1rjw7f8r7kg4yrlkv6cwiiggm6hgx3gqc4jzcmvvmv0ycyi2w3pw"; depends=[ltm sm]; };
+  irtoys = derive2 { name="irtoys"; version="0.2.1"; sha256="0h6iiaxikhbxhbyksbjnb09qdxinlkwr2v9yzs5wslbni14paq5q"; depends=[ltm sm]; };
   irtrees = derive2 { name="irtrees"; version="0.1.0"; sha256="03jmfyx1ia987zhi74fmmcdz70wnm8c7z5z30rwzd1cs11dijjwv"; depends=[]; };
   isa2 = derive2 { name="isa2"; version="0.3.5"; sha256="17vm0906szhrh2k5x694vwcfijbzmd1v3axpszfybc0lgds437cv"; depends=[lattice]; };
   isdals = derive2 { name="isdals"; version="2.0-4"; sha256="15p432fskdz2r8523cw122mfhvrq8vdsdsrd0kz9yfin4b5z3zfh"; depends=[]; };
@@ -7250,7 +7402,7 @@ in with self; {
   isocir = derive2 { name="isocir"; version="2.0-6"; sha256="0dkxdx2g1c579q97r45shws2gylkwqlvrhmc14ddmzi45xhxlql6"; depends=[circular combinat TSP]; };
   isopam = derive2 { name="isopam"; version="0.9-13"; sha256="0y1yy0922kq5jxyc40gz8sk9vlzwfkfg5swmc6lk4007g9mgc8fm"; depends=[cluster vegan]; };
   isopat = derive2 { name="isopat"; version="1.0"; sha256="0fznvgycyd35dh7pbq1xhp667gsficlmycn5pcrqcbs89069xr1s"; depends=[]; };
-  isoph = derive2 { name="isoph"; version="1.1.1"; sha256="1sm03lr03w5zhbi4dl27sid9wxil9891317aichipkyrvqbkkri1"; depends=[Iso survival]; };
+  isoph = derive2 { name="isoph"; version="1.1.2"; sha256="1qw98cnil3rb9d3vbii8drca744qig6bfd3rc74dxm23cj86f66g"; depends=[Iso survival]; };
   isotone = derive2 { name="isotone"; version="1.1-0"; sha256="0alk0cma5h3yn4w2nqcahprijsm89b0gby9najbngzi5vnxr6nvn"; depends=[nnls]; };
   isotonic_pen = derive2 { name="isotonic.pen"; version="1.0"; sha256="1lgw15df08f4dhrjjfr0jqkcvxwad92kflj2px526pcxwkj7cj3i"; depends=[coneproj Matrix]; };
   issueReporter = derive2 { name="issueReporter"; version="0.1.0"; sha256="18s35f5d30vivmlcg0ycni3r8mrf4gnn7x10qdcnpisrlsjx6jbd"; depends=[httpuv httr jsonlite rmarkdown tint]; };
@@ -7260,13 +7412,13 @@ in with self; {
   itcSegment = derive2 { name="itcSegment"; version="0.6"; sha256="0wzp84p6cysk2488p9g9p0r8950ry5wqg13kd34yixzp9m3rx0w4"; depends=[maptools raster rgeos sp]; };
   iteRates = derive2 { name="iteRates"; version="3.1"; sha256="1dycmlm3vldc60wz2jjdfbla14383911zfahgal5mx8whxwq95c5"; depends=[ape apTreeshape geiger gtools MASS partitions VGAM]; };
   iterLap = derive2 { name="iterLap"; version="1.1-3"; sha256="079d4hxf1ha8pgibzb4r1yk7xqpzndd7hjbp8294qb26jvvcnd8q"; depends=[quadprog randtoolbox]; };
-  iterators = derive2 { name="iterators"; version="1.0.8"; sha256="1f057pabs7ss9h1n244can26qsi5n2k3salrdk0b0vkphlrs4kmf"; depends=[]; };
-  iterpc = derive2 { name="iterpc"; version="0.3.3"; sha256="1dqckb3raq5d6fy0h4ikg2xk61pin1hd4cdvpbngzgjzn6b5q1f6"; depends=[gmp iterators Rcpp]; };
+  iterators = derive2 { name="iterators"; version="1.0.9"; sha256="16sycjq912ix52fjxjhcwiaqr0yj1v5iqmrvjljd3z857031w06y"; depends=[]; };
+  iterpc = derive2 { name="iterpc"; version="0.3.4"; sha256="1nbwd6lx6srjb94skghy4jd323sn8a08wvh8r5zqa4l69qg47r65"; depends=[gmp iterators Rcpp]; };
   itertools = derive2 { name="itertools"; version="0.1-3"; sha256="1ls5biiva10pb1dj3ph4griykb9vam02hkrdmlr5a5wf660hg6xn"; depends=[iterators]; };
   itertools2 = derive2 { name="itertools2"; version="0.1.1"; sha256="0yra3x9ddvn5pp3jibm69205zazv81bz0cflw4mdvxpqadaf9f96"; depends=[iterators]; };
   itree = derive2 { name="itree"; version="0.1"; sha256="164zgr142hcp9plnbccs6m823p4m0prk73bvp54bc7bqnqmc3d9a"; depends=[]; };
   itsadug = derive2 { name="itsadug"; version="2.3"; sha256="0wzdy82h05264n9cr84w5j98vz24was9hh1y0wdp56ws3dfbav9m"; depends=[mgcv plotfunctions]; };
-  itsmr = derive2 { name="itsmr"; version="1.7"; sha256="1chqhp57rjsbkc4c0qyx28g1szx0ahbs194dv0rmmcanfimfd0bp"; depends=[]; };
+  itsmr = derive2 { name="itsmr"; version="1.8"; sha256="1w2sjdw9s4smsqdbjabj9jjync0fb931aajjbqhm49cx0g72hi8g"; depends=[]; };
   itunesr = derive2 { name="itunesr"; version="0.1"; sha256="0vfn3vvbfl0ckgr50449xffj8726wsa120ibppbzhalp8rb6hq4a"; depends=[curl jsonlite lubridate xml2]; };
   ivbma = derive2 { name="ivbma"; version="1.05"; sha256="0d7kg6pkdx1aj1i6kqs2r7j1klxxwymml63qnrq6a6fia3ck9kk9"; depends=[]; };
   ivfixed = derive2 { name="ivfixed"; version="1.0"; sha256="0a26zrkvz0ffq4zxdx5vhr1nvsi9c15s6gvc1zy2pddjz31x2xi5"; depends=[Formula]; };
@@ -7281,35 +7433,37 @@ in with self; {
   jackknifeKME = derive2 { name="jackknifeKME"; version="1.2"; sha256="0c5shl6s46kz7a623gccqk2plrrf2g29nwr6vbny6009pq3jvzam"; depends=[imputeYn]; };
   jackstraw = derive2 { name="jackstraw"; version="1.1.1"; sha256="18iah8sq64p7c6rxs21w8rbxvbmbh03jzqbam1ilp46ayfqzk9qc"; depends=[corpcor lfa]; };
   jacpop = derive2 { name="jacpop"; version="0.5"; sha256="056c82d4a10rgq0p4p63y9i94dy1kqp3yh7xms9nx9q2xb940xb5"; depends=[]; };
-  jagsUI = derive2 { name="jagsUI"; version="1.4.8"; sha256="0hz2xp13dhsh9w5f8h1s372d8fa3l2m2sx1g8z58s2b8virzd0yn"; depends=[coda lattice rjags]; };
+  jagsUI = derive2 { name="jagsUI"; version="1.4.9"; sha256="1c2fq7q3kvf092j6r9ci0gigjpb61dj19phzm8mqi05q2k08siin"; depends=[coda lattice rjags]; };
   james_analysis = derive2 { name="james.analysis"; version="1.0.1"; sha256="1b2n4ds4ivfk564z87s2rxjl9j0y4drd3cmyv8jqpccmdvx1137d"; depends=[naturalsort rjson]; };
   janeaustenr = derive2 { name="janeaustenr"; version="0.1.5"; sha256="1wyn4qc28a3sval8shmyi2d7s4nl3jh96s8pzq871brxcmrncbwr"; depends=[]; };
-  janitor = derive2 { name="janitor"; version="0.3.0"; sha256="1x2598yv6r2z4q13vbzsqns6d4q0bki97sqsm67pp77djpw8wkay"; depends=[dplyr magrittr tidyr]; };
+  janitor = derive2 { name="janitor"; version="0.3.1"; sha256="0s2inn0apzwrvm5dvvdh36n9fhhrwvfbs6f3fn6byrbd713xl7rq"; depends=[dplyr magrittr tidyr]; };
   jaod = derive2 { name="jaod"; version="0.1.0"; sha256="0wh1nlfhks4c1dga6h7554pg44pamj73x5in71k2xw0yp292zm6x"; depends=[crul jsonlite tibble]; };
+  jcext = derive2 { name="jcext"; version="0.1"; sha256="18vmf57l2kv3rvi6laqp948m8mjkdxdy0vi4xp68480b2mjmvij1"; depends=[ggplot2 maps RColorBrewer rworldmap sp stringr]; };
   jcolors = derive2 { name="jcolors"; version="0.0.1"; sha256="0a5p8778s14rk7xsivmb0g0c4kzdvbhyxsl8v1lk3cpq6898zv2d"; depends=[ggplot2 scales]; };
+  jdx = derive2 { name="jdx"; version="0.1.2"; sha256="0963h1ppasw5psxgxzav0mnwc5gq0ah5xv5cyhnm8d1a66svn6pw"; depends=[rJava]; };
   jetset = derive2 { name="jetset"; version="3.4.0"; sha256="0c99h5npsv2gf5d59s4qhkaqmjhbwa3prcykk24wzhnpfq6y6xhp"; depends=[AnnotationDbi org_Hs_eg_db]; };
   jiebaR = derive2 { name="jiebaR"; version="0.9.1"; sha256="1qv4k5fgi40ppivdk3mxkhawyf2443h2lz5b9gvai9sqj6vf0s8k"; depends=[jiebaRD Rcpp]; };
   jiebaRD = derive2 { name="jiebaRD"; version="0.1"; sha256="1wadpcdca4pm56r8q22y4axmqdbb2dazsh2vlhjy73rpymqfcph4"; depends=[]; };
   jmcm = derive2 { name="jmcm"; version="0.1.8.0"; sha256="0nv30shwd1219cvs9kaql0n7ppwqngj3avf2qd7nzrnbqp2gl23h"; depends=[Formula Rcpp RcppArmadillo]; };
   jmetrik = derive2 { name="jmetrik"; version="1.0"; sha256="0xnbvby03fqbxgg0i0qxrrzjv98783n6d7c1fywj81x487qlj77j"; depends=[]; };
-  jmotif = derive2 { name="jmotif"; version="1.0.2.900"; sha256="0zgj1g8vy2cj2kyschbr1xb1mb862gniva0sa8qr9p8vvb03ja4v"; depends=[Rcpp RcppArmadillo]; };
-  jmuOutlier = derive2 { name="jmuOutlier"; version="1.3"; sha256="1lzqpdy2987szihsjaq6l1iggjhji0li4cj7914myj3vzfcif8gw"; depends=[]; };
-  jmv = derive2 { name="jmv"; version="0.8"; sha256="0zxq16yn3hn4hnlm7914pz1zdypppa25vdbv11qvp77mhprpvj4f"; depends=[afex BayesFactor car GGally ggplot2 ggridges GPArotation jmvcore lavaan lsmeans multcomp mvnormtest PMCMR psych R6 vcd vcdExtra]; };
+  jmotif = derive2 { name="jmotif"; version="1.0.3"; sha256="1llmrksajrd35kfdzq2vqfm17yv5kwark6gz3rvyzcmbrqk5spqv"; depends=[Rcpp RcppArmadillo]; };
+  jmuOutlier = derive2 { name="jmuOutlier"; version="1.4"; sha256="1vrihjvq8l2q7d3z80fkzzzwg6xmnfi8sipsgwic1lcbv6vnqndp"; depends=[]; };
+  jmv = derive2 { name="jmv"; version="0.8.1.16"; sha256="1m7h0sbva865ki2wf0sxlb6bl1qw936grks2g4h82i2xq9nrlrhh"; depends=[afex BayesFactor car emmeans GGally ggplot2 ggridges GPArotation jmvcore lavaan multcomp mvnormtest PMCMR psych R6 vcd vcdExtra]; };
   jmvcore = derive2 { name="jmvcore"; version="0.8.1.6"; sha256="1k1w4c0c8ayjzhbi4fqxr2pcynf73jhkr4wc933nijhkyd6w8m29"; depends=[base64enc R6 rjson]; };
   jocre = derive2 { name="jocre"; version="0.3.3"; sha256="1i9n3r16pq6r4sy3fc1rxpil5ws8v2is0xdxafinvwr1hzkv1gz6"; depends=[boot KernSmooth plyr TSP]; };
   joinXL = derive2 { name="joinXL"; version="1.0.1"; sha256="1l76bckjz5r1kdsh0s10i0gpca12rkfkp14346fn7avdcw73v23i"; depends=[data_table openxlsx R_utils rChoiceDialogs Rcpp readxl rJava timeDate timeSeries]; };
-  joineR = derive2 { name="joineR"; version="1.2.2"; sha256="0xx89ykympdff8a5zz58syj771kbpzrq393hw5z1rgjswzlyi8r9"; depends=[lattice MASS nlme statmod survival]; };
-  joineRML = derive2 { name="joineRML"; version="0.4.0"; sha256="11fkg5v6y1bmiv58p6gmhhis8xh5v1mll0rma8pwg0gg6viiv4ay"; depends=[doParallel foreach ggplot2 lme4 MASS Matrix mvtnorm nlme randtoolbox Rcpp RcppArmadillo survival]; };
+  joineR = derive2 { name="joineR"; version="1.2.3"; sha256="0cg7bfn0hb7ayx2s7myja5qzdvsbzyk8fbb1x5z0fp21gyrpfz18"; depends=[lattice MASS nlme statmod survival]; };
+  joineRML = derive2 { name="joineRML"; version="0.4.1"; sha256="08zl6wv6yvk2cgp6ln2i9ziip0mjr4jrfpb1y75ln5wi00dbna3x"; depends=[cobs doParallel foreach ggplot2 lme4 MASS Matrix mvtnorm nlme randtoolbox Rcpp RcppArmadillo survival]; };
   joint_Cox = derive2 { name="joint.Cox"; version="2.14"; sha256="0k9v1v4zbv0952zyp7xv5gkmnihfswpsqzp684f9y6n6xcg3v8fx"; depends=[survival]; };
   jointDiag = derive2 { name="jointDiag"; version="0.3"; sha256="0pra70jcnkqkzrxz5vc6lzi637rp5w8n9wbv9ix718vnd0j3fm3n"; depends=[]; };
   jointNmix = derive2 { name="jointNmix"; version="1.0"; sha256="0ibh7hqkpzlfk3bk4d2dd64jhr8cvw563k082vwnljiam7k5nj4b"; depends=[]; };
   jointPm = derive2 { name="jointPm"; version="2.3.1"; sha256="1c2cn9sqwfyv9ksd63w8rrz0kh18jm2wv2sfdkgncjb7vfs4hbv9"; depends=[]; };
   jointseg = derive2 { name="jointseg"; version="1.0.1"; sha256="0wa531b5shrxhnzflfjqn2wypfb565qc2c8wngysgrgyj1kjq1pl"; depends=[acnr DNAcopy matrixStats]; };
-  jomo = derive2 { name="jomo"; version="2.5-1"; sha256="18474na2c1b1950fwn1zzlgbijdawgfjk55lxmvf4czf6annyach"; depends=[lme4 survival]; };
+  jomo = derive2 { name="jomo"; version="2.5-3"; sha256="1ig6r4sc4c2vf3h51by78610c5yqd7ap8gqcf0hswn3h2zsf6vm8"; depends=[lme4 survival]; };
   jose = derive2 { name="jose"; version="0.1"; sha256="1cvrjcx902pbh9xryph1kilmyf0rmbk671jvqd19a2kfwpcw7gqc"; depends=[jsonlite openssl]; };
   jpeg = derive2 { name="jpeg"; version="0.1-8"; sha256="05hawv5qcb82ljc1l2nchx1wah8mq2k2kfkhpzyww554ngzbwcnh"; depends=[]; };
-  jpmesh = derive2 { name="jpmesh"; version="1.0.0"; sha256="09aw01yyca0bqjpzqavl1sb89kc3yplja8gd30mab0yyphg71qcx"; depends=[dplyr leaflet miniUI purrr readr rlang sf shiny tibble tidyr]; };
-  jpndistrict = derive2 { name="jpndistrict"; version="0.2.0"; sha256="106i3mxxlfj2mq0ghymp39i70mc1w71mrycza31dpccmp1k9habd"; depends=[dplyr leaflet magrittr miniUI readr sf shiny stringi tibble]; };
+  jpmesh = derive2 { name="jpmesh"; version="1.0.1"; sha256="1c8swlqjaaq4jqhs0cda704c17ykk80vmqnlxrizfl87qvvl5ak6"; depends=[dplyr leaflet miniUI purrr readr rlang sf shiny tibble tidyr]; };
+  jpndistrict = derive2 { name="jpndistrict"; version="0.3.0"; sha256="0vnawpkrkhv0vjvw49ldn86qy07pqsdw7mmq13h3l4qw5jmfsd9i"; depends=[dplyr jpmesh leaflet magrittr miniUI purrr readr rlang sf shiny stringi tibble tidyr]; };
   jqr = derive2 { name="jqr"; version="1.0.0"; sha256="1jdr3wb1fd2zjmmdicqhskgk7xbn5y6998fi9szj86p8smfckl74"; depends=[lazyeval magrittr]; };
   jrich = derive2 { name="jrich"; version="0.60-35"; sha256="1y486bfqmfg3f22wm0lfk3lh20ljgi8qrgn5jji0f417wh48nf0x"; depends=[ape]; };
   jrvFinance = derive2 { name="jrvFinance"; version="1.03"; sha256="16mki26ns593xn1p1la2ihkddlwvzwdvjr3h2vz71bq5db11iffq"; depends=[]; };
@@ -7319,16 +7473,17 @@ in with self; {
   jsonlite = derive2 { name="jsonlite"; version="1.5"; sha256="00lfg464jhf7k01bal9pcjvbdf5cxk6xi2h46hccp1x3h883g434"; depends=[]; };
   jsonvalidate = derive2 { name="jsonvalidate"; version="1.0.0"; sha256="08c1s8fk95np4l6km077dmd1nibhhggi80f5465hhbq521gm0awl"; depends=[V8]; };
   jtGWAS = derive2 { name="jtGWAS"; version="1.5.1"; sha256="06cgsncgrqslxcc7s0lb3zwa85bhzkmjzz3f04716xpzwa186vxq"; depends=[Rcpp]; };
-  jtools = derive2 { name="jtools"; version="0.9.0"; sha256="1lxjg5hwgpj34h4jk041xpqklsb6v81d6q0w2dvxinrk7j1p51wr"; depends=[ggplot2]; };
+  jtools = derive2 { name="jtools"; version="0.9.4"; sha256="0vljw3n1ykvf3f2ydar9rb24cgiqljh195g2jc4dx77zy1kcfh4d"; depends=[ggplot2]; };
   jtrans = derive2 { name="jtrans"; version="0.2.1"; sha256="18zggqdjzjhjwmsmdhl6kf35w9rdajpc2nffag4rs6134gn81i3m"; depends=[]; };
   jug = derive2 { name="jug"; version="0.1.7"; sha256="01m6hyr26f6zih49pz2bmmr8ypdl1qiz0wv3padcy68kaccf44a4"; depends=[base64enc httpuv infuser jsonlite magrittr mime R6 webutils]; };
-  junr = derive2 { name="junr"; version="0.1.2"; sha256="1b1x0fma51wapchia49351wig57fgwc5sw7xsm8rb1g30k294rkz"; depends=[httr jsonlite]; };
+  junctions = derive2 { name="junctions"; version="1.0"; sha256="13vqmy4968hpxi6vs3kfgd802miw8navcvsjmak6knwa2mjhhd54"; depends=[Rcpp]; };
+  junr = derive2 { name="junr"; version="0.1.3"; sha256="0wcglpziyi6z4n7w70srziljba3jkb27iqxbxz4kk6774c7valbf"; depends=[httr jsonlite]; };
   jvnVaR = derive2 { name="jvnVaR"; version="1.0"; sha256="0zh0dc6wqlrxn5r2yv9vkpyfb8xsbdidkjv9g6qr94fyxlbs4yci"; depends=[]; };
   jwutil = derive2 { name="jwutil"; version="1.1.1"; sha256="114vph86722v89iwyla7skl06cv87ymfy6nmca5iyxwx1z78zddz"; depends=[checkmate Rcpp]; };
   kSamples = derive2 { name="kSamples"; version="1.2-7"; sha256="0f19rjngk0lg6s8c6h5l55qpxp8sl4vxj3kpi05cizzncny9b9bj"; depends=[SuppDists]; };
-  kableExtra = derive2 { name="kableExtra"; version="0.6.1"; sha256="0v27ncspb5l348spvfc0qlfyalv9hm4z5w6k5yp36a4qpdlkd42s"; depends=[knitr magrittr readr rmarkdown rvest scales stringr viridisLite xml2]; };
+  kableExtra = derive2 { name="kableExtra"; version="0.7.0"; sha256="1rj41kcvc46nn6fvqhsc9v1snq2phh09vchkdng1avbm3g5sld62"; depends=[htmltools knitr magrittr readr rmarkdown rvest scales stringr viridisLite xml2]; };
   kader = derive2 { name="kader"; version="0.0.8"; sha256="15f2swgngw5rdjdsh5kd55wm2nivlfs8pv4mdn0b75qihwgg1zkk"; depends=[]; };
-  kamila = derive2 { name="kamila"; version="0.1.1.1"; sha256="06jl868i8a6zg3pyaf1r6ccd33ya5f83apc5w6d3m111dzdqqlcy"; depends=[abind gtools KernSmooth mclust plyr Rcpp]; };
+  kamila = derive2 { name="kamila"; version="0.1.1.2"; sha256="0mcray8byifjddsmwzmcpmw3zpm1y8q3nfrgpgacb36rwprqkj6z"; depends=[abind gtools KernSmooth mclust plyr Rcpp]; };
   kangar00 = derive2 { name="kangar00"; version="1.1"; sha256="1rm3mjghgfq8fliha6flqvcb6m4xag1697c0q5smg515453l0s0p"; depends=[bigmemory biomaRt CompQuadForm data_table igraph KEGGgraph lattice sqldf]; };
   kantorovich = derive2 { name="kantorovich"; version="2.0.0"; sha256="0y965nkhgk0z2q2j3sycfg76aqqi3ry8avg0bz9xggpd60bhh5vd"; depends=[gmp lpSolve rcdd Rglpk]; };
   kaphom = derive2 { name="kaphom"; version="0.2"; sha256="09rxvg37nbjs78l9yh86a2kd428dnfws2wz82mx9frys3ys6zhfl"; depends=[]; };
@@ -7346,17 +7501,19 @@ in with self; {
   kehra = derive2 { name="kehra"; version="0.1"; sha256="1cc0bmbg0dncay50ap7cs2516qngzz3ddaab0jk5r6lwfq87h8qx"; depends=[Hmisc raster reshape2 sp stringr xts zoo]; };
   kelvin = derive2 { name="kelvin"; version="2.0-0"; sha256="04xdgpmysksm79m3vqmb4zra3pq09nv99w4fbdla1lmy7z8pkdrk"; depends=[Bessel]; };
   kequate = derive2 { name="kequate"; version="1.6.1"; sha256="1rjya1rnlfk2ziiwhkgshlyk3g0388591q3q01a3vgmgsb3cpxl6"; depends=[equateIRT ltm mirt]; };
-  keras = derive2 { name="keras"; version="2.0.9"; sha256="0c8b450chfmwm8hq3h3vgajdy4vi6zigvqikk2509n5x61qxidn8"; depends=[magrittr R6 reticulate tensorflow tfruns zeallot]; };
+  keras = derive2 { name="keras"; version="2.1.3"; sha256="02pzwl6z06f36njns8kirngqzkk3f1bwzifk05xm41ry9rppa5l3"; depends=[magrittr R6 reticulate tensorflow tfruns zeallot]; };
   kerasR = derive2 { name="kerasR"; version="0.6.1"; sha256="1yi7710vgcwz0jhishbga41sc6qyk83a0avmq01dvqjsz3cdfsfc"; depends=[reticulate]; };
+  kerasformula = derive2 { name="kerasformula"; version="0.1.1"; sha256="0c19208y9v8a1w4p54z7yng5vvmb6h79fs0a20ij98ngys9afbwz"; depends=[dplyr keras Matrix]; };
   kerdiest = derive2 { name="kerdiest"; version="1.2"; sha256="16xj2br520ls8vw5qksxq9hqlpxlwmxccfk5balwgk5n2yhjs6r3"; depends=[chron date evir]; };
   kergp = derive2 { name="kergp"; version="0.2.0"; sha256="1xamj19v84m1f9ls8ac8xbm6airyjf96i1l48yy4l2rvjdmx6m9l"; depends=[doParallel MASS numDeriv Rcpp testthat]; };
   kernDeepStackNet = derive2 { name="kernDeepStackNet"; version="2.0.2"; sha256="04bdggxvggmppp289n2zw6ijdm7y05gws6z7bp6fr8n1zsxy2w3c"; depends=[caret DiceKriging DiceOptim GA GenSA glmnet globalOptTests lhs matrixStats mvtnorm Rcpp RcppEigen]; };
   kerndwd = derive2 { name="kerndwd"; version="2.0.1"; sha256="1grinlqjjsxw1x152f9y38lhijh74zc831ddc0lk2niq2rvzszdw"; depends=[]; };
   kernelFactory = derive2 { name="kernelFactory"; version="0.3.0"; sha256="001kw9k3ivd4drd4mwqapkkk3f4jgljiaprhg2630hmll064s89j"; depends=[AUC genalg kernlab randomForest]; };
-  kernelboot = derive2 { name="kernelboot"; version="0.1.2"; sha256="0k06zxq8978v7zsfylxld64819vd3wj33brpxz0fan3ni01rh7kn"; depends=[future Rcpp]; };
+  kernelboot = derive2 { name="kernelboot"; version="0.1.4"; sha256="1d1l9sbnlyx5a88qmd6q2zxlkr6dykcwlkk648yqmmfvqmq4xjmj"; depends=[future future_apply Rcpp]; };
   kernlab = derive2 { name="kernlab"; version="0.9-25"; sha256="0qnaq9x3j2xc6jrmmd98wc6hkzch487s4p3a9lnc00xvahkhgpmr"; depends=[]; };
   kernplus = derive2 { name="kernplus"; version="0.1.0"; sha256="0wibp4bbzxmjdyhp643v76accjy1w8jixmwgsdfrq2yjxacgnwcb"; depends=[circular KernSmooth mixtools]; };
   kernscr = derive2 { name="kernscr"; version="1.0.3"; sha256="0h3xv76dxch8kv4z7cgx60iaikk6906n75c4kc1mccpw0jvyxrvb"; depends=[MASS mvtnorm]; };
+  kexpmv = derive2 { name="kexpmv"; version="0.0.3"; sha256="1nx2bpyc06vlr78nhig4zaaygphjp4wqsz9jzhs4qx8wy3kh7rmy"; depends=[Rcpp SparseM]; };
   keyholder = derive2 { name="keyholder"; version="0.1.1"; sha256="1dp326vayjzjpfhd2ajrpqjvbn6vvqa7iw9mdhblprz4cvv65g30"; depends=[dplyr rlang]; };
   keyplayer = derive2 { name="keyplayer"; version="1.0.3"; sha256="0j4n46r9ivkbzqz8g22dq2bpmx7bs05yb5qp27p9jnfh5x19v2ds"; depends=[igraph matpow sna]; };
   keypress = derive2 { name="keypress"; version="1.1.1"; sha256="0w8hcxxx47zyz2cbz2s8va2rfb6s2ziw9ck1slq9kh3aqsx3i9g0"; depends=[]; };
@@ -7364,16 +7521,16 @@ in with self; {
   keyringr = derive2 { name="keyringr"; version="0.4.0"; sha256="04f0z6mqj75l5qhiab0zvjsvz3jz1bp6dfazkpgihjmls5k11dnh"; depends=[stringr]; };
   kfda = derive2 { name="kfda"; version="1.0.0"; sha256="0861hzry55gj8ykdd8cwil1wb7234pkmipp4v1749fpmzggq1xgi"; depends=[kernlab MASS]; };
   kfigr = derive2 { name="kfigr"; version="1.2"; sha256="0hmfh4a95883p1a63lnziw8l9f2g0fn0xzxzh36x9qd9nm7ypmkw"; depends=[knitr]; };
-  kgc = derive2 { name="kgc"; version="1.0.0.1"; sha256="0yy8rp4h0z6x4h5fpg92z75xks2salv34vlkcgm2a8739c2dnkh3"; depends=[plyr shiny shinythemes]; };
+  kgc = derive2 { name="kgc"; version="1.0.0.2"; sha256="14zbcimnglh5jj07dcaxp1dfjaz8syswy29nf8z39qmslv1hg9kk"; depends=[plyr shiny shinythemes]; };
   kgschart = derive2 { name="kgschart"; version="1.3.5"; sha256="1gdsrmnv8z99cldvig7grlq8gsbv3wpx7zdamw85lz563n4ln94d"; depends=[abind deepnet ggplot2 gridExtra magrittr matrixStats nnet png shiny stringr]; };
-  kimisc = derive2 { name="kimisc"; version="0.3"; sha256="1cdjhfdfidilvz0w92xfjwwnp2h73y8l1n7fxnh5jsv6wnx491l4"; depends=[plyr pryr]; };
+  kimisc = derive2 { name="kimisc"; version="0.4"; sha256="0nbjspbq9akhmamfdn192p5b6ki7xqhp422ih6v77xsnrhl5m24z"; depends=[memoise plyr pryr]; };
   kin_cohort = derive2 { name="kin.cohort"; version="0.7"; sha256="0wijsjz0piz5j9rm2nr3d5dfpiyba740mbfbkmfll9pz72s58wz8"; depends=[survival]; };
   kineticF = derive2 { name="kineticF"; version="1.0"; sha256="1k54zikgva9fw9c4vhkc9b0kv8sq5pmc962s8wxr6qv97liv9p46"; depends=[circular lqmm MASS plotrix sp splancs]; };
   kinfit = derive2 { name="kinfit"; version="1.1.14"; sha256="0gb43pghgllb9gzh8jzzpfmc46snv02ln4g3yqsdah3cyqnck0ih"; depends=[]; };
   kinship2 = derive2 { name="kinship2"; version="1.6.4"; sha256="19r3y5as83nzk922hi4fkpp86gbqxdg1bgng798g1b073bp6m9yj"; depends=[Matrix quadprog]; };
   kirby21_base = derive2 { name="kirby21.base"; version="1.6.0"; sha256="1l9ynmkh27m6c3862j7xqiydanknd1zplqvsay5amh7k13isj9gg"; depends=[git2r]; };
-  kirby21_fmri = derive2 { name="kirby21.fmri"; version="1.5.1"; sha256="1hifxp6ilzgakbdz067lmpz1wrq8ah9a8kv542717z1pn6bmw69w"; depends=[kirby21_base kirby21_t1]; };
-  kirby21_t1 = derive2 { name="kirby21.t1"; version="1.5.1"; sha256="0gs39fy8wxrilgfyz1dlkaar4gf9qifcdxc4vzy2vha0z2ci46sy"; depends=[kirby21_base]; };
+  kirby21_fmri = derive2 { name="kirby21.fmri"; version="1.6.0"; sha256="15dhb7d2xrka55gg4f1n74dysj74c4fv9hpdx2n1vc79n90zl6yr"; depends=[kirby21_base]; };
+  kirby21_t1 = derive2 { name="kirby21.t1"; version="1.6.0"; sha256="0zanqmndm15fld31g7zpam3y3z63aw1sgk74ya2l95cn21ln34a3"; depends=[kirby21_base]; };
   kissmig = derive2 { name="kissmig"; version="1.0-3"; sha256="1pi1x3gdbqrhr1km1hqj15k8wyrgs697fnxgjgxga1irbn8bi482"; depends=[raster]; };
   kitagawa = derive2 { name="kitagawa"; version="2.1-0"; sha256="1ddyd0rwwmdpbq823qass5dlp2lvi9d64wpl61ik6fghms2p9ryr"; depends=[kelvin]; };
   kknn = derive2 { name="kknn"; version="1.3.1"; sha256="1nzkg3dxaiqp87p56wm895qx5xn86hv5hjr73qvl1yiaxiq0x112"; depends=[igraph Matrix]; };
@@ -7385,6 +7542,7 @@ in with self; {
   kmconfband = derive2 { name="kmconfband"; version="0.1"; sha256="10n5w8k57faqcclwshs4m66i2i5b70i6f3xq5nqlgsi2ldkysbc9"; depends=[survival]; };
   kmcudaR = derive2 { name="kmcudaR"; version="1.0.0"; sha256="1adixf4nsgnk8rgvcv37aznh8gxrfwn19ihh3c6siss51hlmhln2"; depends=[Rcpp RcppEigen]; };
   kmeans_ddR = derive2 { name="kmeans.ddR"; version="0.1.0"; sha256="1i87cxakjbq1xwyjyyzv1xiqbrncsqx6baviidcdm3n0pakrqdsg"; depends=[ddR Rcpp]; };
+  kmed = derive2 { name="kmed"; version="0.0.1"; sha256="0vcks4n0dpfd5cl5b8mhvhw6r2f3y12jn3d3j3dkj2grxmb9lh4c"; depends=[ggplot2]; };
   kmi = derive2 { name="kmi"; version="0.5.3"; sha256="0b3nibvi0skrx3mjfzypqmdqx8s9zkn11f0ljscqpjr28idx4hr0"; depends=[mitools survival]; };
   kml = derive2 { name="kml"; version="2.4.1"; sha256="1my9gcripiqc6iphycjr3srj8qxy05yvd0648vblygrx2qym5hy2"; depends=[clv longitudinalData]; };
   kml3d = derive2 { name="kml3d"; version="2.4.2"; sha256="1a3hqyhrsh12l1j1xlz4zy88impw3biz6w2qc80r11m549h0m6s9"; depends=[clv kml longitudinalData misc3d rgl]; };
@@ -7393,21 +7551,21 @@ in with self; {
   kmodR = derive2 { name="kmodR"; version="0.1.0"; sha256="1y1pqrrralklflyb1dw8bslfcyqrw8ryijfbhkwba7ykpxcf9fda"; depends=[]; };
   knitLatex = derive2 { name="knitLatex"; version="0.9.0"; sha256="1igacc2sx8897wmnhh8kngd0fq6zqbi30chy5c8jw60zc38mi3wi"; depends=[knitr]; };
   knitcitations = derive2 { name="knitcitations"; version="1.0.8"; sha256="07h8d5cp52qcm0912c55j59k2p3c7s4af87qa7a9hafhgimnsdiv"; depends=[digest httr RefManageR]; };
-  knitr = derive2 { name="knitr"; version="1.17"; sha256="00gljbz57n9lkvbd6az4n37gpbs8vg3fxx5p9biamhmhqyra514l"; depends=[digest evaluate highr markdown stringr yaml]; };
+  knitr = derive2 { name="knitr"; version="1.19"; sha256="1gyj9bw90h4h9rc9k1iqrnzirm2f8mj45zi8bkjc6rp610vlh63j"; depends=[evaluate highr markdown stringr yaml]; };
   knitrBootstrap = derive2 { name="knitrBootstrap"; version="1.0.1"; sha256="089147g7nqp99rwdxxsfmklsrwc8aia09sr8ndmrc335r33v6r6p"; depends=[knitr markdown rmarkdown]; };
+  knitrProgressBar = derive2 { name="knitrProgressBar"; version="1.0.0"; sha256="18r025j4c6m0c8rir3cskc4dymnxybl076ghy6a9iy38in58v547"; depends=[R_oo R6]; };
   knnGarden = derive2 { name="knnGarden"; version="1.0.1"; sha256="1gmhgr42l6pvc6pzlq5khrlh080795b0v1l5xf956g2ckgk5r8m1"; depends=[cluster]; };
   knnIndep = derive2 { name="knnIndep"; version="2.0"; sha256="1fwkldgs2994svf3sj90pwsfx6r22cwwa22b30hdmd24l8v9kzn7"; depends=[]; };
   knncat = derive2 { name="knncat"; version="1.2.2"; sha256="1d392910y3yy46j8my1a7m0xkij2rc6vwq5fg22qk00vqli8drz2"; depends=[]; };
   knockoff = derive2 { name="knockoff"; version="0.3.0"; sha256="0irqbidp00rh07xsfyyv5d3ksa4fn9vv49rsy8ah2gb9y41iy046"; depends=[corpcor glmnet gtools Matrix Rdsdp RSpectra]; };
-  knor = derive2 { name="knor"; version="0.0-3"; sha256="0va6n7rb6fnks053l52016n6crf93daa9fafjifbgmbmc0xw8c4c"; depends=[Rcpp]; };
   knotR = derive2 { name="knotR"; version="1.0-2"; sha256="0kd1b9wibpwyaanz9ny61qgfvcg4d3rzpy05sfshlpp0b1y8d3xj"; depends=[]; };
   kntnr = derive2 { name="kntnr"; version="0.4.1"; sha256="0d78mgmz2yhfbf4m5jaa28aazaw2wf9vf1vxl53wrnpy0hxw329y"; depends=[base64enc dplyr httr jsonlite lazyeval lubridate purrr rstudioapi stringr tibble]; };
   koRpus = derive2 { name="koRpus"; version="0.10-2"; sha256="1ykaky10zkj76w44fhk6kb6dqz1pgncmdnz4r2amcm08a8h96gsr"; depends=[data_table]; };
   kobe = derive2 { name="kobe"; version="1.3.2"; sha256="1z64jwrq6ddpm22cvk2swmxl1j7qyz0ddk3880c7zfq6gk7f9bxl"; depends=[coda emdbook ggplot2 MASS plyr reshape]; };
-  kofdata = derive2 { name="kofdata"; version="0.1"; sha256="0xgxpb3a4qvy5f14yg5rasdms0kqwzwjvydj0f6p0zlrlbf0644v"; depends=[httr jsonlite xts zoo]; };
+  kofdata = derive2 { name="kofdata"; version="0.1.3"; sha256="135fkfciya8d215iv0ir7kmd01w7rlzqfcif5jz918skrv2p9mcl"; depends=[httr jsonlite xts zoo]; };
   kofnGA = derive2 { name="kofnGA"; version="1.2"; sha256="1j4gx6pkmasgbgcdlg6i5nzfrmim61c2hw34k5zfmwfbkrsgb575"; depends=[]; };
   kohonen = derive2 { name="kohonen"; version="3.0.4"; sha256="1aq98qbmbzsdyimhn28qiyqfrwkwq70qmm5yhx0rvhjq53bn9622"; depends=[MASS Rcpp]; };
-  kokudosuuchi = derive2 { name="kokudosuuchi"; version="0.4.1"; sha256="03cs44m3zz7f4dm6imqb22x87pq0a1w0v9c4vgh03mljssz54gp0"; depends=[curl dplyr glue httr purrr rlang sf shiny stringi stringr tibble xml2]; };
+  kokudosuuchi = derive2 { name="kokudosuuchi"; version="0.4.2"; sha256="1nwydfyr9waa5h8h8nrmwxy0jx7i4893g5khfv6b4g09z6g5cyly"; depends=[curl dplyr glue httr purrr rlang sf shiny stringr tibble xml2]; };
   kolmim = derive2 { name="kolmim"; version="1.0"; sha256="0g1i0cazi4nhfwdd3ywqrar1sn7bw77w38qjii045w5vqg05srkp"; depends=[]; };
   komadown = derive2 { name="komadown"; version="0.1.0"; sha256="08rg2qz4dmxl4xi0d7wdl2xgdmsc29fdc0yi40yddzrbpj4vs2z4"; depends=[bookdown knitr rmarkdown]; };
   kpcalg = derive2 { name="kpcalg"; version="1.0.1"; sha256="1gd5bisyfwb12l9jmwhi2arlxrabc01vgv4m1qqs23vybsd6yh52"; depends=[energy graph kernlab mgcv pcalg RSpectra]; };
@@ -7416,19 +7574,20 @@ in with self; {
   kpodclustr = derive2 { name="kpodclustr"; version="1.0"; sha256="1fywgdj4q3kg8y9lwnj6vxg9cwgs5ccwj6m3knfgg92f8ghnsbsw"; depends=[clues]; };
   kriens = derive2 { name="kriens"; version="0.1"; sha256="1qi65k9fsbbkbw0w40rv60p5ygrvr10rmlyxdaqa5bdpcmrbly5z"; depends=[]; };
   kriging = derive2 { name="kriging"; version="1.1"; sha256="04bxr34grf2nlrwvgrlh84pz7yi0r8y7dc2wk0v5h5z6yf5a085w"; depends=[]; };
-  krm = derive2 { name="krm"; version="2016.7-9"; sha256="0yc8agnb4685fa00pnwsxwc4vnr2aj2dwb6zxppj62r6c59xl47f"; depends=[kyotil]; };
-  ks = derive2 { name="ks"; version="1.10.7"; sha256="01s5lzv5nmj5c8siz9wpiqcnixdhcqd5z5fhc5g7x6ym3xgcc1d5"; depends=[FNN KernSmooth misc3d multicool mvtnorm rgl]; };
+  krm = derive2 { name="krm"; version="2018.1-24"; sha256="0qysv61vjdz8674hn6mk0913dkm2bfkqmr7cybls9z9h4i068vdk"; depends=[kyotil]; };
+  ks = derive2 { name="ks"; version="1.11.0"; sha256="1wbw6zqsm7n65hbxiabpap2nbqq7795ir2r3fd7rw125hibj73k4"; depends=[FNN kernlab KernSmooth Matrix mclust mgcv misc3d multicool mvtnorm OceanView rgl]; };
   kscons = derive2 { name="kscons"; version="0.7.0"; sha256="1i4dp56y9swl5s6cipqlm5i5fknz2v0yz5g930cl5i8kx91rxwrp"; depends=[]; };
   kselection = derive2 { name="kselection"; version="0.2.0"; sha256="1arg96r2pldvb89rfqnfpjxwksyac2mhmbimbkwzm7wrnbnrcn5d"; depends=[]; };
   ksrlive = derive2 { name="ksrlive"; version="1.0"; sha256="1zd3ggzgjks0jay69s5m7ihbd7v7zha6ssj2m9ahnyp00ghpk83j"; depends=[tightClust]; };
-  kst = derive2 { name="kst"; version="0.2-1"; sha256="1wy9cvvln994qgr0p7qa9qs1jd7gjv6ch65gg6i42cf9681m9h65"; depends=[proxy relations sets]; };
+  kst = derive2 { name="kst"; version="0.3-0"; sha256="0q181gzs4xcmsyrljlsh2rmqggs62lwrnnqsmra3qq3ya18clhzz"; depends=[proxy relations sets]; };
+  kstIO = derive2 { name="kstIO"; version="0.1-0"; sha256="04s8lyg7622zcq947qlx5brwf1an7icg94i5di8vwjp7d8zgczq6"; depends=[MASS pks sets stringr]; };
   ktsolve = derive2 { name="ktsolve"; version="1.1"; sha256="0b5myr093v3qaj9gzbw1w728i5ij418whxxpicj51w657dcy647k"; depends=[]; };
   ktspair = derive2 { name="ktspair"; version="1.0"; sha256="1v63982jidxlcf2syahcb29myv34kc790l7lwyfxx9l50ssb812n"; depends=[Biobase]; };
   kulife = derive2 { name="kulife"; version="0.1-14"; sha256="070ayy6fr9nsncjjljikn2i5sp2cx3xjjqyc64y2992yx74jgvvd"; depends=[]; };
-  kutils = derive2 { name="kutils"; version="1.0"; sha256="12rlvaqq0dgz9qvm7lnmr3x90gg5iz58jh3d1hf08lbj4s50a8d4"; depends=[lavaan openxlsx plyr xtable]; };
-  kvh = derive2 { name="kvh"; version="1.0.1"; sha256="07isil951q1b8rdlqvbx8gnmjgjf8dmb7nswvivbcvkfigi7mr2s"; depends=[Rcpp]; };
+  kutils = derive2 { name="kutils"; version="1.34"; sha256="17f6pzinmp4lcjd5glhnvbjy1yg912jccx9d4n55bini93vlcz0z"; depends=[foreign lavaan openxlsx plyr RUnit xtable]; };
+  kvh = derive2 { name="kvh"; version="1.1"; sha256="1dvq7wbpx1hpjshvsihivd8q8hyhji047gifxc6cjnv778r4irb1"; depends=[Rcpp]; };
   kwb_hantush = derive2 { name="kwb.hantush"; version="0.2.1"; sha256="0rjnhhzvjhhl0r2ixz9vkgnqkrnnk772253zy7xkpadj7ws69jsf"; depends=[hydroGOF lattice]; };
-  kyotil = derive2 { name="kyotil"; version="2017.10-31"; sha256="0f0ji5jpkqcmqa35daxa82bw5x74gljpxgf60xbflc5xydamdhx8"; depends=[]; };
+  kyotil = derive2 { name="kyotil"; version="2017.12-27"; sha256="0xd64xg3nj0pj0ziycq4ndpl8kwxfng96ag8zmqzzxk85zw2vyq3"; depends=[]; };
   kza = derive2 { name="kza"; version="4.0.0"; sha256="0yfn6ijbskdkcgbgk4fwhgiiy34cw9k9vy1psi779mqd9kyjf56j"; depends=[]; };
   kzfs = derive2 { name="kzfs"; version="1.5.0.1"; sha256="0gd945x1ppdw15iqcn5ijzmh07hs7zg8rjb85231bcqbh98djvfm"; depends=[digest kzft]; };
   kzft = derive2 { name="kzft"; version="0.17"; sha256="1y6almhs1x21cr4bbf5fj3mnhp65ivzs869660cyg70sva853sv7"; depends=[polynom]; };
@@ -7439,18 +7598,18 @@ in with self; {
   laGP = derive2 { name="laGP"; version="1.5-1"; sha256="0sqzvz78p50afp892p7ghy4fmy9p3a2ik51bzzwrx6r96ax7w971"; depends=[tgp]; };
   labdsv = derive2 { name="labdsv"; version="1.8-0"; sha256="0rbf7cswnj534jdi5hfaai12nbxj6l96f02c73ynraqvdqxb1bnz"; depends=[cluster MASS mgcv]; };
   label_switching = derive2 { name="label.switching"; version="1.6"; sha256="0k6f31gwcjfncsgd5cm9zygplif2wr8zjqrw4gmrnxcgp2z58a9w"; depends=[combinat lpSolve]; };
+  labelVector = derive2 { name="labelVector"; version="0.0.1"; sha256="0iwk8p3m2g6732q2pilwr3wlaiys15khd54r0vxsp2irlw77lzrg"; depends=[]; };
   labeledLoop = derive2 { name="labeledLoop"; version="0.1"; sha256="0gq392h0sab8k7k8bzx6m7z5xpdsflldhwbpdf92zbmkbzxsz00m"; depends=[]; };
   labeling = derive2 { name="labeling"; version="0.3"; sha256="13sk7zrrrzry6ky1bp8mmnzcl9jhvkig8j4id9nny7z993mnk00d"; depends=[]; };
-  labelled = derive2 { name="labelled"; version="1.0.0"; sha256="02jg7zq52wfq2dw8a26vmp28bv88v651ysbqfqf7jv3dr9xgim4f"; depends=[haven]; };
+  labelled = derive2 { name="labelled"; version="1.0.1"; sha256="18mz4qraxalq50rzmblsvavx4isb4194rj4iqab09qzh8ib1qzwv"; depends=[haven]; };
   labelrank = derive2 { name="labelrank"; version="0.1"; sha256="03pmpkjdhgw80473kdzdz4s4828pa8f5bja2zqicxrhvyvicvz6f"; depends=[pdist]; };
-  labeltodendro = derive2 { name="labeltodendro"; version="1.3"; sha256="13kpmv26zzjf5iwpr4vs797irplmaixp1agx5v80wr4lvd2hirvg"; depends=[]; };
   labstatR = derive2 { name="labstatR"; version="1.0.8"; sha256="1qs76vhw6ihsriq5v0s980fxbb0pbvgwqm0a97b226cpqqabkpfm"; depends=[]; };
   labstats = derive2 { name="labstats"; version="1.0.1"; sha256="1780slp9l1rqwr5ika6hv606jzbaa3g1ywzkjkd3ff2gb0cby3ni"; depends=[]; };
   laeken = derive2 { name="laeken"; version="0.4.6"; sha256="1rhkv1kk508pwln1d325iq4fink2ncssps0ypxi52j9d7wk78la6"; depends=[boot MASS]; };
   laercio = derive2 { name="laercio"; version="1.0-1"; sha256="0la6fxv5k9zq4pyn8dxjiayx3vs9ksm9c6qg4mnyr9vs12z53imm"; depends=[]; };
   lagged = derive2 { name="lagged"; version="0.1-1"; sha256="062a9hrnp2bsahsdasml0wzqpapyslfiwy9q2mvwqsl6j2pqkk0s"; depends=[]; };
   lagsarlmtree = derive2 { name="lagsarlmtree"; version="1.0-0"; sha256="0nrrr2n2q228d1c7qrhcnczmr374i56p7kr868yl19g8ddd3gx3w"; depends=[Formula partykit spdep]; };
-  lakemorpho = derive2 { name="lakemorpho"; version="1.1.0"; sha256="1qdh67a6a6iibvvba12z763xf989qfh08b3xgk1hy1irgc8myvll"; depends=[cluster geosphere maptools raster rgdal rgeos sp]; };
+  lakemorpho = derive2 { name="lakemorpho"; version="1.1.1"; sha256="0asrp9rvyi5ykxw922qx25rgxvyc9mh4sc7qkbpwzqw8xvgpad2z"; depends=[cluster geosphere raster rgdal rgeos sp]; };
   laketemps = derive2 { name="laketemps"; version="0.5.1"; sha256="04742r379bzgbfr4243wwkb26cvfmnw50jzgygq7vblq00grzska"; depends=[dplyr reshape2]; };
   lamW = derive2 { name="lamW"; version="1.3.0"; sha256="00qa1sxyqb2r7f9yidg43cq2v1285f45xpm3z928jpi424mpg0fc"; depends=[Rcpp RcppParallel]; };
   lambda_r = derive2 { name="lambda.r"; version="1.2"; sha256="0vql32np716dpd0kjn7s7wgawd02ysgp2a5il4kb19nlw661ii3x"; depends=[]; };
@@ -7461,11 +7620,11 @@ in with self; {
   landsat8 = derive2 { name="landsat8"; version="0.1-10"; sha256="169b5ka98ka9chbmksz6syaygc9wgl8i2gz1h2xkxj3lk9jcg01r"; depends=[rgdal sp]; };
   landscapeR = derive2 { name="landscapeR"; version="1.2"; sha256="1zm5mj861ycbc2m28yjqnkifx8grc4l718mf8r422m78jfakvcjy"; depends=[raster Rcpp]; };
   languageR = derive2 { name="languageR"; version="1.4.1"; sha256="0grkhdjz9dcrgq6qwv7wpwmckn3mfv022c5wrx29b1dxafd0qzm0"; depends=[]; };
-  languagelayeR = derive2 { name="languagelayeR"; version="1.1.0"; sha256="1588bdv2nwqvzkhj607b3r8z8hkp2bay4bhh0nm2b89q1a7r2g4v"; depends=[httr magrittr rjson]; };
+  languagelayeR = derive2 { name="languagelayeR"; version="1.2.3"; sha256="1sh3k8xw88pm93wmpy1qi44i8pv5b5g6ajzas36bdi1bqm8cqzax"; depends=[attempt curl httr rjson]; };
   lans2r = derive2 { name="lans2r"; version="1.0.5"; sha256="1m3hz85gl9m4vafdy7mj3z560d11mdwlwvnzy8n7d1cjqryn7a2b"; depends=[dplyr ggplot2 lazyeval R_matlab reshape2 tidyr]; };
   lar = derive2 { name="lar"; version="0.1-2"; sha256="0qda0y4ag10kg83wxs3z754kc8c1dg2rwciy64klk7an4ln43i5b"; depends=[data_table treemap xlsx]; };
   largeList = derive2 { name="largeList"; version="0.3.1"; sha256="0csijzlxajj0rh24w5n7fs6ss301zr6zfv5khyq4a9g437bwhc2i"; depends=[]; };
-  largeVis = derive2 { name="largeVis"; version="0.2.1"; sha256="0jzqkgs81xf3wgw8mx6mgvy2sgriakbhzbiizmbk24q177dw09bx"; depends=[ggplot2 Matrix Rcpp RcppArmadillo RcppProgress testthat]; };
+  largeVis = derive2 { name="largeVis"; version="0.2.1.1"; sha256="14jgfykvawcqmb94zwpss246ljbwf4qdgmpwwfsnplrxs7agycb5"; depends=[ggplot2 Matrix Rcpp RcppArmadillo RcppProgress testthat]; };
   lars = derive2 { name="lars"; version="1.2"; sha256="0blj44wqrx6lmym1m9v6wkz8zxzbjax2zl6swgdczci0ixb5nx34"; depends=[]; };
   lasso2 = derive2 { name="lasso2"; version="1.2-19"; sha256="0zkwjsd42a6z4gylq9xbs4z8n1v7ncwvssjnn3h4yz1icjfzzlvk"; depends=[]; };
   lassopv = derive2 { name="lassopv"; version="0.1.3"; sha256="07b7n74z4jvrirf0rc0sbvz9nm2s2s22mb8y973iwpf0i7fqxq2c"; depends=[lars]; };
@@ -7480,25 +7639,26 @@ in with self; {
   lattice = derive2 { name="lattice"; version="0.20-35"; sha256="0pcnmaz3lr62ly0dcy5hnnqxshc4yqd43hrvlz3almgc9l7sna88"; depends=[]; };
   latticeDensity = derive2 { name="latticeDensity"; version="1.0.7"; sha256="1y33p8hfmpzn8zl4a6zxg1q3zx912nhqlilca6kl5q156zi0sv3d"; depends=[spam spatstat spdep splancs]; };
   latticeExtra = derive2 { name="latticeExtra"; version="0.6-28"; sha256="1hkyqsa7klk5glj9y1hg3rxr5qilqw8h0017zc4c3nps7lr9a1kq"; depends=[lattice RColorBrewer]; };
-  lava = derive2 { name="lava"; version="1.5.1"; sha256="1vcm04h9i39gmf2prl5d4j4il4gs6skzr6y2fvl1vn4hklna87f4"; depends=[numDeriv survival]; };
+  lava = derive2 { name="lava"; version="1.6"; sha256="02xf5d968raz9gnq5ywy04wz29xpdyca1hm79vbbg1mcxvzdl1dz"; depends=[numDeriv SQUAREM survival]; };
   lava_tobit = derive2 { name="lava.tobit"; version="0.5"; sha256="15dlcjgnvrpdxymcwf4rvk72ssr650dy1ayp50zlrp2va0p6h4kw"; depends=[lava mets mvtnorm survival]; };
+  lavaSearch2 = derive2 { name="lavaSearch2"; version="1.1.0"; sha256="1nmzj4yfgas6a9wss34ckd55gajxmd9a0fk8lmpxc2130hlr4ld8"; depends=[ggplot2 lava MASS Matrix multcomp mvtnorm nlme reshape2 sandwich]; };
   lavaan = derive2 { name="lavaan"; version="0.5-23.1097"; sha256="11wxzjg09q5wzvbp1lhi9sjnp4rrjpdxnmq3zf8npx08iwkw79ws"; depends=[MASS mnormt numDeriv pbivnorm quadprog]; };
   lavaan_shiny = derive2 { name="lavaan.shiny"; version="1.2"; sha256="0qgswdpxb5af0l3v70sg0jrgsdwr88gz6zzwbk3pw5x6qnvnwb6r"; depends=[lavaan psych semPlot shiny shinyAce]; };
   lavaan_survey = derive2 { name="lavaan.survey"; version="1.1.3.1"; sha256="133hpy8s00y6jzwwzl9brdh70w26jycdm3n1c6bcryghwh3ai4xr"; depends=[lavaan MASS survey]; };
-  lavaanPlot = derive2 { name="lavaanPlot"; version="0.1.0"; sha256="13m4rsh0nbqfnyasbrf3bw844jg1l7bqd2drckrqwss2h7ks029q"; depends=[DiagrammeR lavaan]; };
+  lavaanPlot = derive2 { name="lavaanPlot"; version="0.3.0"; sha256="12j6r98p4ghcnk813s2z9r1mlwzkp6jyxjllk5nl554h5s5jg92i"; depends=[DiagrammeR lavaan]; };
   lawn = derive2 { name="lawn"; version="0.4.2"; sha256="17nj88n5xzhjkwm0hi8g9h5a3nclvkq3k1pv3690ph14g4l9lgcj"; depends=[jsonlite magrittr V8]; };
   lawstat = derive2 { name="lawstat"; version="3.2"; sha256="03ppzyx3x6vx1n2k5l8gl9j2q2mnqa1im5smxnrlncan7yzjy7sf"; depends=[Kendall mvtnorm VGAM]; };
   lazy = derive2 { name="lazy"; version="1.2-15"; sha256="1pdqgvn0qpfg5hcg5159ccf5qj2nd1ibai9p85rwjpddfynk6jks"; depends=[]; };
   lazyData = derive2 { name="lazyData"; version="1.1.0"; sha256="0mbmmx6dh8ph4lrx1b4gxbwz3jwxv4nqi0xvfzpzrm3bwbsjc634"; depends=[]; };
-  lazyWeave = derive2 { name="lazyWeave"; version="3.0.1"; sha256="02c3z479y6xxng2x6vp6m0rvf3jsb9n26h00l93djxads8717i1x"; depends=[Hmisc]; };
+  lazyWeave = derive2 { name="lazyWeave"; version="3.0.2"; sha256="1a7l0rgkp3xq2s6bikciq778fwyr282baa6jk9ip4a71s931p2ag"; depends=[Hmisc labelVector]; };
   lazyeval = derive2 { name="lazyeval"; version="0.2.1"; sha256="0q9zx78ncy2ffzrf9sh053069kd3w1xn1ss3gsbyf3y4jhza9cw3"; depends=[]; };
   lazyrmd = derive2 { name="lazyrmd"; version="0.2.0"; sha256="0ahm1wspvm625lx7y2zz05bvv66rlswphs84vpkcqb0dqfcn3s48"; depends=[digest htmltools htmlwidgets knitr rmarkdown]; };
   lazysql = derive2 { name="lazysql"; version="0.1.3"; sha256="18vff80rl8ckjwfqi9dhzs1q35a1wrxvynidji6dy2kvvk38xnpa"; depends=[checkmate magrittr plyr]; };
-  lba = derive2 { name="lba"; version="2.4.3"; sha256="0q83abkdwxrj4x17wrx0zcmv2z8rzji0qzz8psvjx1vkcxma3ix7"; depends=[alabama MASS plotrix rgl scatterplot3d]; };
+  lba = derive2 { name="lba"; version="2.4.4"; sha256="0izqndm992zv3sg8v5lpnxbdbxhpxl6hq3bf6xgq3pnw8vl3f6nb"; depends=[alabama MASS plotrix rgl scatterplot3d]; };
   lbfgs = derive2 { name="lbfgs"; version="1.2.1"; sha256="0p99g4f3f63vhsw0s1m0y241is9lfqma86p26pvja1szlapz3jf5"; depends=[Rcpp]; };
   lbfgsb3 = derive2 { name="lbfgsb3"; version="2015-2.13"; sha256="1jpy0j52w8kc8qnwcavjp3smvdwm1qgmswa9jyljpf72ln237vqw"; depends=[numDeriv]; };
   lbiassurv = derive2 { name="lbiassurv"; version="1.1"; sha256="1i6l3y4rasqpqka7j39qjx22wjbilgc9pkp05an52aysfvfxy193"; depends=[actuar]; };
-  lbreg = derive2 { name="lbreg"; version="1.1"; sha256="13gzjkrnsdkxzinfzb0fvpijif8n66xxjmwfqpg99hgc13kn9y36"; depends=[MASS]; };
+  lbreg = derive2 { name="lbreg"; version="1.2"; sha256="0wcw5w07fgmxwzmamf380l8vxw9fnxhbrhcwwfy6x87xby3bzr1b"; depends=[MASS]; };
   lcda = derive2 { name="lcda"; version="0.3"; sha256="1ximsyn6qw2gfn7b1hdpbjs6h6nk7hrignlii0np1lbf0k8l4xxl"; depends=[poLCA]; };
   lclGWAS = derive2 { name="lclGWAS"; version="1.0.3"; sha256="03b6ijqvyirv96hc3dsqf4f0zzqlmq5451mcb14d2mw3s6xy1vmq"; depends=[BH Rcpp]; };
   lcmm = derive2 { name="lcmm"; version="1.7.8"; sha256="180xfx842sic5qnfr0zh2h4345zkzlf123pdw4q6gd0mi5smwwc7"; depends=[survival]; };
@@ -7521,7 +7681,7 @@ in with self; {
   leaflet = derive2 { name="leaflet"; version="1.1.0"; sha256="05faikqdlbsj9lvl1lvhmagys71597jvgah8b9f1fqhgyj0bwx7l"; depends=[base64enc crosstalk htmltools htmlwidgets magrittr markdown png raster RColorBrewer scales sp viridis]; };
   leaflet_esri = derive2 { name="leaflet.esri"; version="0.2"; sha256="18y3hzbn4apn209rww8hk4mkx5ix6b6z01ydr31d39bqlgg6n7zf"; depends=[htmltools htmlwidgets leaflet leaflet_extras magrittr shiny]; };
   leaflet_extras = derive2 { name="leaflet.extras"; version="0.2"; sha256="1baxcgcxizyf05w8gb5zjmvrsbrhpwvrxrblcv5vpy4vk73921v1"; depends=[htmltools htmlwidgets leaflet magrittr shiny stringr]; };
-  leaflet_minicharts = derive2 { name="leaflet.minicharts"; version="0.5.1"; sha256="037x7ajdwshhmjf5cr4ha5bw1cc53cbczdc3ybdl4kp2i07gwrsq"; depends=[htmltools leaflet]; };
+  leaflet_minicharts = derive2 { name="leaflet.minicharts"; version="0.5.2"; sha256="028nw9nh4q3lkw9kr4lgs78wnm79ynkjx7f215ch42183nfzlypi"; depends=[htmltools leaflet]; };
   leafletCN = derive2 { name="leafletCN"; version="0.2.1"; sha256="1rg39n4bjacwss9nbdnz8y2zh8hxlc7a5ygndhjbmzajnbxfh09b"; depends=[htmltools jsonlite leaflet magrittr rgeos sp]; };
   leafletR = derive2 { name="leafletR"; version="0.4-0"; sha256="0j1i971dl3smq8rcsa5s4rfmmk936k2q6xa4hppfzwhrxs3xkkkx"; depends=[brew jsonlite]; };
   leapp = derive2 { name="leapp"; version="1.2"; sha256="1yiqzmhgl5f3zwpcc5sz3yqrvp8p6r4w2ffdfyirirayqc96ar17"; depends=[corpcor MASS sva]; };
@@ -7534,41 +7694,43 @@ in with self; {
   learnstats = derive2 { name="learnstats"; version="0.1.1"; sha256="1sa064cr7ykl4s1ssdfmb3v1sjrnkbwdh04hmwwd9b3x0llsi9vv"; depends=[ggplot2 Rcmdr shiny]; };
   lefse = derive2 { name="lefse"; version="0.1"; sha256="1zdmjxr5xa5p3miw79mhsswsh289hgzfmn3mpj1lyzal1qgw1h5m"; depends=[ape fBasics geiger picante SDMTools vegan]; };
   leiv = derive2 { name="leiv"; version="2.0-7"; sha256="15ay50886xx9k298npyksfpva8pck7fhqa40h9n3d7fzvqm5h1jp"; depends=[]; };
-  lemon = derive2 { name="lemon"; version="0.3.1"; sha256="0p0hvw0ndqcxcg8sqwk1kfrlksp985vd4jpkww7ijmw6kmwl9mwy"; depends=[ggplot2 gridExtra gtable knitr lattice RCurl]; };
+  lemon = derive2 { name="lemon"; version="0.3.3"; sha256="0jxcyplr69a3rganqc02ry57xj7is7dylsh9kvsy6kwnji6bvdib"; depends=[ggplot2 gridExtra gtable knitr lattice]; };
   lero_lero = derive2 { name="lero.lero"; version="0.1"; sha256="1jndsgy48fn085ilkh8dfc3w76kfnfj0x70d1m3h59zxi3x9lb82"; depends=[stringr]; };
-  lessR = derive2 { name="lessR"; version="3.6.6"; sha256="1i02i9lzgx8rf5x7pcp1vxvsgdl9jdnldj7q7qg22blaphdbl7qb"; depends=[ellipse foreign lattice latticeExtra leaps png readxl robustbase sas7bdat triangle]; };
+  lessR = derive2 { name="lessR"; version="3.7.0"; sha256="14zzm7dsjwl94bcnzrkf8bk83nxsini11s5l0pia31xnm6yl89ln"; depends=[colorspace ellipse foreign lattice latticeExtra leaps png readxl robustbase sas7bdat triangle]; };
   lestat = derive2 { name="lestat"; version="1.8"; sha256="12w3s5yr9lsnjkr3nsay5sm4p241y4xz0s3ir56kxjqw23g6m80v"; depends=[MASS]; };
-  letsR = derive2 { name="letsR"; version="3.0"; sha256="1mm0d7v29d594w2xxv6h1k6dsav2cs31hi64lyxjar1bi4snp6hj"; depends=[fields geosphere maps maptools raster rgdal rgeos sp XML]; };
+  letsR = derive2 { name="letsR"; version="3.1"; sha256="0wyqqq7w21k87md3pwsz3kdaws345fdhh2xgavwiiywalg0gvxxx"; depends=[fields geosphere maps maptools raster rgdal rgeos sp XML]; };
   lettercase = derive2 { name="lettercase"; version="0.13.1"; sha256="0s2s42v6a3mlz6084sk5wcbap3czgbd53f9p64pxwd1yfj18lbyx"; depends=[stringr]; };
-  lexRankr = derive2 { name="lexRankr"; version="0.4.1"; sha256="09pqpa0ps7j3s86d9njfa2qpgiadlhz96pwvgdiad8ninwk1j8b0"; depends=[dplyr igraph magrittr Rcpp SnowballC stringr tidyr tm]; };
-  lexicon = derive2 { name="lexicon"; version="0.4.1"; sha256="122qvglwn2pi4zzd7cl2pqwaabsg4w7cbp4vf5gn5wnlm3rc2xd3"; depends=[data_table syuzhet]; };
+  lexRankr = derive2 { name="lexRankr"; version="0.5.0"; sha256="1l0p4qg6lcpp1f2n6mh1glvxzy3bis0c1ra8x9z5v26x31wmwq68"; depends=[igraph Rcpp SnowballC]; };
+  lexicon = derive2 { name="lexicon"; version="0.7.4"; sha256="1f2n90xdpbxk6ffzzlib7fxxswwkfrpf404vzx85s016529dy42m"; depends=[data_table syuzhet]; };
   lexiconPT = derive2 { name="lexiconPT"; version="0.1.0"; sha256="0w53gnr29nzc1ib54rnxdycs0c5f7vpv586qmvxxzy4ar16kisaq"; depends=[]; };
   lfactors = derive2 { name="lfactors"; version="1.0.1"; sha256="13vjafbss0860fi4qcf23g3cjs9dlr2k5f3majbnyvhwsbfs7cla"; depends=[]; };
   lfda = derive2 { name="lfda"; version="1.1.2"; sha256="0y59iigcpmyrmsiwrpv5agja6vz3wxmxd9sl5hbf1ybm4d0lyky4"; depends=[plyr rARPACK]; };
-  lfe = derive2 { name="lfe"; version="2.5-1998"; sha256="0i1vs9m8a9dadansczwg7jbah73bnxvidrld9inf8xyi8x15265z"; depends=[Formula Matrix sandwich xtable]; };
+  lfe = derive2 { name="lfe"; version="2.6-2291"; sha256="1hdzq85y1nxrinikf308mvdmyw883bfzbamr27ffdphlk403ry70"; depends=[Formula Matrix sandwich xtable]; };
   lfl = derive2 { name="lfl"; version="1.4"; sha256="09ni0n7xqn3qw9jjh24j679cyzgf0cxxw535ap4z44jjk29bqngw"; depends=[e1071 foreach forecast plyr Rcpp tseries zoo]; };
   lfstat = derive2 { name="lfstat"; version="0.9.4"; sha256="0lm9fyw45kdkkjldkmagykn9p3l3jlw2ky3h00f7j6rqkizjm6r0"; depends=[dygraphs lattice latticeExtra lmom lmomRFA plyr xts zoo]; };
+  lg = derive2 { name="lg"; version="0.1.0"; sha256="0gaid5aihc9dk3igbm8jhsspl1k4k3prqvn7j2vsm92jc7m00iyw"; depends=[ggplot2 ks localgauss logspline mvtnorm]; };
   lga = derive2 { name="lga"; version="1.1-1"; sha256="1nkvar9lmdvsc3c21xmrnpn0haqk03jwvc9zfxvk5nwi4m9457lg"; depends=[boot lattice]; };
   lgarch = derive2 { name="lgarch"; version="0.6-2"; sha256="05xksc4d6dbf5ls4lf2gpk9xyi99fikr7dva88b84rfgads1yhrh"; depends=[zoo]; };
   lgcp = derive2 { name="lgcp"; version="1.4"; sha256="10gnfqq5vx18w6f52fliyfnrjmyns9q5q59pn2m82q2fqwaz26d8"; depends=[fields iterators maptools Matrix ncdf4 RandomFields raster rgeos rpanel sp spatstat spatstat_utils]; };
   lgtdl = derive2 { name="lgtdl"; version="1.1.5"; sha256="1sixq56d2px36q0xq3kl0zwj2yzm3q8fhgqjvmajcdd5jl8l7130"; depends=[]; };
   lhmixr = derive2 { name="lhmixr"; version="0.1.0"; sha256="1c4ydgq1z2y0xk8xqdsim6xvgxdbl3gglfk5kcr9k4m01arvv0rf"; depends=[]; };
-  lhs = derive2 { name="lhs"; version="0.14"; sha256="1qnr3s9511nq3xqdbngllmw3mvnnpblma5dafyghxlpvydc2l481"; depends=[]; };
+  lhs = derive2 { name="lhs"; version="0.16"; sha256="09clh386i5iig8x36lx02p01zqq0kb9hzvw5slv1ggmjnp1rklcw"; depends=[]; };
   libamtrack = derive2 { name="libamtrack"; version="0.6.3"; sha256="0pdwrz19q1yls0rgr4579f31j86awizx3j31h7vdh6y70ngpmb82"; depends=[]; };
-  libcoin = derive2 { name="libcoin"; version="0.9-3"; sha256="1gmgppc5vf11zmsbyayljijd9n3n9j0ns1hia0x7m5jm6nyjxgql"; depends=[mvtnorm]; };
-  libsoc = derive2 { name="libsoc"; version="0.5"; sha256="0p01mcwnkb4g3dq0mx1gbwfbznp4b2dmhs8k8wmnh7wll16v9i6z"; depends=[]; };
+  libcoin = derive2 { name="libcoin"; version="1.0-1"; sha256="1i38v0pq5snx9clhgfiymk6lq87h41pajhp2dvin30snnq0py6qq"; depends=[mvtnorm]; };
+  librarysnapshot = derive2 { name="librarysnapshot"; version="0.1.2"; sha256="0v4x564zpm58kxs5n84bi6mcjhbzjg6a2lc30vsc8kbm3qy0nq38"; depends=[]; };
+  libsoc = derive2 { name="libsoc"; version="0.6.4"; sha256="1hdnqgnvzm5116gphxa55k2bc3ksr607px2s2yg1ilmmxdghdccw"; depends=[]; };
   libstableR = derive2 { name="libstableR"; version="1.0"; sha256="0qk70rl76lz2izgp2c1asx0yvi8xgfq1yg579kcygxk4pnxjdwv4"; depends=[Rcpp]; };
-  lidR = derive2 { name="lidR"; version="1.3.1"; sha256="162gf587rhpfx29kxlq21axhvjxkj9bx5zryl3vfzad9309n0an9"; depends=[data_table gdalUtils geometry gstat lazyeval magrittr mapedit mapview memoise raster Rcpp RcppProgress rgeos rgl rlas settings sp stringr]; };
-  lifecontingencies = derive2 { name="lifecontingencies"; version="1.3.1"; sha256="09hk5rbcvsvx7axh2kimb71rm9zwmna20g839ddblzsmknjrjrhl"; depends=[markovchain Rcpp]; };
+  lidR = derive2 { name="lidR"; version="1.4.1"; sha256="01nw6i7ddk99zayblqhxsnx2cy29ippii9vdqahffv91644iqqb1"; depends=[data_table future gdalUtils geometry gstat lazyeval magrittr mapedit mapview memoise RANN raster Rcpp RcppProgress rgeos rgl rlas settings sp stringr]; };
+  lifecontingencies = derive2 { name="lifecontingencies"; version="1.3.2"; sha256="012pfiz4l8xrwrjlzwfc0vxw1wpw2n2f2vj39mlpmg5aswg4mm8k"; depends=[markovchain Rcpp]; };
   lifecourse = derive2 { name="lifecourse"; version="2.0"; sha256="1m8ihqvzhzpq2m2pdvh37bpq9pdbj23r3y0jkl3q8farh3qj473d"; depends=[TraMineR]; };
   lifelogr = derive2 { name="lifelogr"; version="0.1.0"; sha256="1wygvw61ygpww0kahxhmjdncwg4zc2cshs0brzw18nfqaj8vpfav"; depends=[dplyr fitbitScraper ggplot2 lazyeval lubridate modelr plyr R6 shiny stringr tibble tidyr]; };
   lift = derive2 { name="lift"; version="0.0.2"; sha256="0ynsyl6lw7z7bvwzk2idgxzzqji5ffnnc3bll9h4gwdw666g7fln"; depends=[]; };
   liftLRD = derive2 { name="liftLRD"; version="1.0-6"; sha256="1mnrhdig7kb7g6ffw7x9l8bpn66y7bh3n6ds5r2gb3nplnidi45y"; depends=[adlift nlt]; };
-  liftr = derive2 { name="liftr"; version="0.7"; sha256="1gyjhb7lp65jaamij2xxyyqryz69b5r6s7b7h8g4qj8w6jqbpsay"; depends=[knitr rmarkdown rstudioapi stringr yaml]; };
+  liftr = derive2 { name="liftr"; version="0.8"; sha256="1z5n7xfmaymkz9pl6pbss351dy626nd0m1wn4jpbxvx74fw99a1y"; depends=[knitr rmarkdown rstudioapi stringr yaml]; };
   lightsout = derive2 { name="lightsout"; version="0.3"; sha256="0ypniqf9wk35dd9j57wd7gxchr5hy25fwhmkndz2z8b9ajhm3c9b"; depends=[magrittr shiny shinyjs]; };
-  likeLTD = derive2 { name="likeLTD"; version="6.2.1"; sha256="1b5rg1nijc4vsl7xabq35ini84rpnd1yrxsk1vr7wd57yac25mmk"; depends=[DEoptim gdata ggplot2 gtools rtf]; };
+  likeLTD = derive2 { name="likeLTD"; version="6.3.0"; sha256="1mjf4667xd9pf2684d7vqaj54l5s9pgljn4vkfp32wzbfknq6y8r"; depends=[DEoptim gdata ggplot2 gtools rtf]; };
   likelihood = derive2 { name="likelihood"; version="1.7"; sha256="0q8lvwzlniijyzsznb3ys4mv1cqy7ibj9nc3wgyb4rf8676k4f8v"; depends=[nlme]; };
-  likelihoodAsy = derive2 { name="likelihoodAsy"; version="0.45"; sha256="0sl0q6w49l89i6s80scsr5lrr8jgdd0788i4b87w985zaxjqrh03"; depends=[alabama cond nleqslv pracma Rsolnp]; };
+  likelihoodAsy = derive2 { name="likelihoodAsy"; version="0.50"; sha256="009alsxsv9fjpihp3zl0a94y6cvr49nh21skba64lzz9fypm9j8l"; depends=[alabama cond digest nleqslv pracma Rsolnp]; };
   likelihoodExplore = derive2 { name="likelihoodExplore"; version="0.1.0"; sha256="13cnql7pbx8qq1j3cfb3lkzzf2k55shpfa0jd00z30ys6imxzcfn"; depends=[lazyeval plyr]; };
   likert = derive2 { name="likert"; version="1.3.5"; sha256="0c4irxs7pp1z8nj4s8cq23daw4h94n3h7x4f6q1d85614qcl9l3p"; depends=[ggplot2 gridExtra plyr psych reshape2 xtable]; };
   limSolve = derive2 { name="limSolve"; version="1.5.5.3"; sha256="1ll6ir42h3g2fzf0wqai213bm82gpwjj2hfma2np3mz024sc09rg"; depends=[lpSolve MASS quadprog]; };
@@ -7581,8 +7743,8 @@ in with self; {
   linear_tools = derive2 { name="linear.tools"; version="1.3.0"; sha256="14lp3gifzbid82lkr7rdqajz2abp8m7y8irpwx6s8w66djjfckda"; depends=[ggplot2 magrittr plyr pryr scales stringr]; };
   linemap = derive2 { name="linemap"; version="0.1.0"; sha256="0qkbmpfr742xbs3xn5ppx6q0prwrr9mk1c1mv050cm47dm7jcs6l"; depends=[sf]; };
   lineup = derive2 { name="lineup"; version="0.37-6"; sha256="1xyvw00lwnx7j3cgk4aw69lam6ndjxx3wj14h4jpx1xn8l3w7652"; depends=[class qtl]; };
-  lingtypology = derive2 { name="lingtypology"; version="1.0.8"; sha256="0a2zpm40b9h78pcvx08kvsiks2hqngs4530ikmgqg30gg3mwbvqq"; depends=[leaflet leaflet_minicharts magrittr MASS rowr sp stringdist]; };
-  link2GI = derive2 { name="link2GI"; version="0.1-0"; sha256="1i16yf387izv8vn0z8f7wgk02hld83lhfb5c263mn1v3q5zj9kki"; depends=[gdalUtils raster rgdal rgrass7 sf sp]; };
+  lingtypology = derive2 { name="lingtypology"; version="1.0.11"; sha256="1cn1q7n1kf4llhzxq0ixrd8n8izksrxczr4h6q7923imjiaclv2n"; depends=[leaflet leaflet_minicharts magrittr MASS rowr sp stringdist]; };
+  link2GI = derive2 { name="link2GI"; version="0.3-0"; sha256="0jzk1p9cygcw0xz9hqfzx74acl4ymn3jmcjj0dxrmknsvfdzcl2d"; depends=[gdalUtils raster rgdal rgrass7 RSAGA sf sp]; };
   linkR = derive2 { name="linkR"; version="1.1.1"; sha256="1748r7s5g0gvsmghrb7l5lmdbzb9f4vkbgj51v308jr64r1k7l93"; depends=[svgViewR]; };
   linkcomm = derive2 { name="linkcomm"; version="1.0-11"; sha256="1w5sfmzvrk30fr161pk0cy5nj8kasqm6hqgyafq6r280b5s272cb"; depends=[dynamicTreeCut igraph RColorBrewer]; };
   linkim = derive2 { name="linkim"; version="0.1"; sha256="0yvyid9x59ias8h436a202hd2kmqvn8k1zcrgja2l4z2pzcvfn91"; depends=[]; };
@@ -7592,18 +7754,18 @@ in with self; {
   lintr = derive2 { name="lintr"; version="1.0.2"; sha256="14l6fi2mdc2swi4xw865q63yngk2b5k553qbyvnhmwq2w4pv07pn"; depends=[codetools crayon digest httr igraph jsonlite knitr rex rstudioapi stringdist testthat]; };
   liqueueR = derive2 { name="liqueueR"; version="0.0.1"; sha256="0rpjib0dz39la63gy9bw9gmdfq2fcx40y4y4wcb6ky41qcjdp1nd"; depends=[itertools]; };
   liquidSVM = derive2 { name="liquidSVM"; version="1.2.1"; sha256="0nw8n4qg2jijbnlza15ifzqsl4pj7gjzi4nd71zp7h0aw5mnp80x"; depends=[]; };
-  lira = derive2 { name="lira"; version="2.0.0"; sha256="1b756hci427fckr5vfr092nb9bmc5c47j3szrscjsiysm0j7817h"; depends=[coda rjags]; };
+  lira = derive2 { name="lira"; version="2.0.1"; sha256="10bjmapnlw5z5cnbdpkwisvjkmk7zi9xqrvgmb5psj317zcxfc2p"; depends=[coda rjags]; };
   liso = derive2 { name="liso"; version="0.2"; sha256="072l7ac1fbkh8baiiwx2psiv1sd7h8ggmgk5xkzml069ihhldj5i"; depends=[Iso MASS]; };
   lisp = derive2 { name="lisp"; version="0.1"; sha256="025sq46277q9i21189cbmx5dnrh5wfshc5k6la1wjilhr1iqf6nj"; depends=[]; };
   lisrelToR = derive2 { name="lisrelToR"; version="0.1.4"; sha256="0zicq0z3hhixan1p1apybnf3v5s6v6ysll4pcz8ivygwr2swv3p5"; depends=[]; };
   list = derive2 { name="list"; version="8.3"; sha256="1wffh7xmhdf4hqbpz4ij0759zk0y0zsm160kzfcr2n8s9wdgm5gj"; depends=[coda corpcor gamlss_dist magic MASS mvtnorm quadprog sandwich VGAM]; };
   listWithDefaults = derive2 { name="listWithDefaults"; version="1.2.0"; sha256="1rv9jq9zlr5dm08mimba6ni2p5vkfybrgrqk1alm7y6mqpx56byp"; depends=[assertthat]; };
   listdtr = derive2 { name="listdtr"; version="1.0"; sha256="08drps03nndpdxswyv8bjm1bcckjav5pjj7fdx3dzyn0v4dfy619"; depends=[ggplot2]; };
-  listenv = derive2 { name="listenv"; version="0.6.0"; sha256="0kyq90mf7wv9qgw3s81iv0b8ah0ncc5kv15r7fv6ggdq4f0z0dx7"; depends=[]; };
+  listenv = derive2 { name="listenv"; version="0.7.0"; sha256="0ma5jsri2zqkrlsm9nqpikl7imbwfy1glsmk13mblw0q245h49k1"; depends=[]; };
   listless = derive2 { name="listless"; version="0.0-2"; sha256="1gr6l4vih7j28kg2mj1xj2yhlpwjc4p894vsxri25vq0r9kgcdym"; depends=[magrittr tidyr]; };
   listviewer = derive2 { name="listviewer"; version="1.4.0"; sha256="1273vk8pk393ciwahvpmdh9z4xdlhw3a7mlm7jsqxqnsrc6jrz3x"; depends=[htmltools htmlwidgets shiny]; };
   liteq = derive2 { name="liteq"; version="1.0.1"; sha256="080ljgb2qsfmyppnlp9acmskgq94pmdbbgbhygqkxvzda5bbas8h"; depends=[assertthat DBI rappdirs RSQLite]; };
-  littler = derive2 { name="littler"; version="0.3.2"; sha256="0anwlxyj82xgrccb3pf6glrkqbkw1871hj4b1qrkmd5ss2f3xq9j"; depends=[]; };
+  littler = derive2 { name="littler"; version="0.3.3"; sha256="1cbsnm4ffzld93b9q8g6g6h6yskjfwa8j1xani5682ipb7r290x7"; depends=[]; };
   liureg = derive2 { name="liureg"; version="1.1.1"; sha256="11cybb1i3a0na3yadzwmn1hlglqk0zdzxj0n07ygsxrdq7sxbpnj"; depends=[]; };
   livechatR = derive2 { name="livechatR"; version="0.1.0"; sha256="1k0z6q3s9iw962m1lwlx45p95flzl5jg1xh6ng426v9jh1yyrbb2"; depends=[data_table dplyr jsonlite magrittr purrr]; };
   ljr = derive2 { name="ljr"; version="1.4-0"; sha256="0jby94ml8w6pwnxbmv6qfjww2myvvnn9vrmlqpdh71dhgp3z35py"; depends=[]; };
@@ -7615,16 +7777,15 @@ in with self; {
   lm_br = derive2 { name="lm.br"; version="2.9.3"; sha256="1xadz0rygm58igk0ig0w45132gnsvjxvwqzca4m6v6i6lz9x55pf"; depends=[Rcpp]; };
   lmPerm = derive2 { name="lmPerm"; version="2.1.0"; sha256="1ss2hcfxqvfq4n6hypv7jp0n0apby9payxzaswaysr5368lkidn3"; depends=[]; };
   lmSupport = derive2 { name="lmSupport"; version="2.9.11"; sha256="1yvckfahw3kq0r28ggrml7qhgm4ib5ihd971zxg62li4inrkri6b"; depends=[AICcmodavg car gplots gvlma lme4 pbkrtest psych pwr]; };
-  lme4 = derive2 { name="lme4"; version="1.1-14"; sha256="1vars93604q7kyz6y1f8f886l05jkgj8bs78033l2czypvzki5la"; depends=[lattice MASS Matrix minqa nlme nloptr Rcpp RcppEigen]; };
+  lme4 = derive2 { name="lme4"; version="1.1-15"; sha256="0sc6rvhiizxxpkdc3wps200wg3pqc0d89crn29lzm75fk8qdd7vx"; depends=[lattice MASS Matrix minqa nlme nloptr Rcpp RcppEigen]; };
   lmeNB = derive2 { name="lmeNB"; version="1.3"; sha256="03khn9wgjbz34sx0p5b9wd3mhbknw8qyvyd5pvllmjipnir63d3q"; depends=[lmeNBBayes numDeriv statmod]; };
   lmeNBBayes = derive2 { name="lmeNBBayes"; version="1.3.1"; sha256="13shfsh9x6151xy8gicb25sind90imrwclnmfj96b76p5dvhzabm"; depends=[]; };
   lmeSplines = derive2 { name="lmeSplines"; version="1.1-10"; sha256="0fy6hspk7rqqkzv0czvvs8r4ishvs7zsf4ykvia65nj26w7yhyia"; depends=[nlme]; };
-  lmeVarComp = derive2 { name="lmeVarComp"; version="1.0"; sha256="17zrl33h4lcd8lpdv3d12h5afj8nxr2lyw6699zq4fds2chbq66l"; depends=[]; };
   lmec = derive2 { name="lmec"; version="1.0"; sha256="09shj01h2dl5lh7ch0wayr7qyhlmk0prv3p1vfgy91sn0wpbqlxr"; depends=[mvtnorm]; };
   lmem_gwaser = derive2 { name="lmem.gwaser"; version="0.1.0"; sha256="0i315plqq1c8d7nvzk7jj9b3n4pgy27673pgdbii4c5bccwm12vn"; depends=[fdrtool genetics lattice LDheatmap lme4 pastecs qtl stringr]; };
   lmem_qtler = derive2 { name="lmem.qtler"; version="0.1.1"; sha256="0qbllj66y294n1m8dsyrnwyvzscbzg8mb2dmjyghcrfaz925vkin"; depends=[lattice lme4 pastecs qtl stringr]; };
   lmenssp = derive2 { name="lmenssp"; version="1.2"; sha256="1vc90x3y1vzmzblc15kqar3nd3c3p8p9nvmpk0ib52n0qv5pr6wz"; depends=[geoR MASS mvtnorm nlme]; };
-  lmerTest = derive2 { name="lmerTest"; version="2.0-33"; sha256="1r4bwxq36hn41hwjph2nrn4jhh0y2kwc746374ng5jd480gkgl8m"; depends=[ggplot2 Hmisc lme4 MASS Matrix plyr]; };
+  lmerTest = derive2 { name="lmerTest"; version="2.0-36"; sha256="1ja56y45fdxa5xqwzng4rk3vjcfjvmchfcpdy08lv9dzkp71g1qp"; depends=[ggplot2 Hmisc lme4 MASS Matrix plyr]; };
   lmeresampler = derive2 { name="lmeresampler"; version="0.1.0"; sha256="00v3qg5vyjjb0pcbrknzxy80kkwsypkhwkv3nsck5rscaf86y3aq"; depends=[boot dplyr Matrix nlmeU plyr RLRsim]; };
   lmf = derive2 { name="lmf"; version="1.2"; sha256="1xqlqmjl7wf5b2s2a1k1ara21v74b3wvwl4mhbj9dkdb0jcrgfva"; depends=[]; };
   lmfor = derive2 { name="lmfor"; version="1.2"; sha256="1lad1sfrf6lsksix4nn2c2dc5fx0rfm4kdhvbmqf9dc55f98rla8"; depends=[MASS nlme]; };
@@ -7634,14 +7795,15 @@ in with self; {
   lmmot = derive2 { name="lmmot"; version="0.1.4"; sha256="1a8msh9yvvd7cv1zxlxdv8arlfvxqghxzcxls23v6ifl5jf4d1p3"; depends=[MASS maxLik]; };
   lmmpar = derive2 { name="lmmpar"; version="0.1.0"; sha256="1l3zjmlfjfn2wv4yayqzv6qrwaxk2sgx3hjx371b5fs54zspdj20"; depends=[bigmemory doParallel MASS matrixcalc mnormt plyr]; };
   lmms = derive2 { name="lmms"; version="1.3.3"; sha256="1gralhk9plmpmdya7cfzgzwzr8ab47pz4f76kvlp03sp5gcy4063"; depends=[gdata ggplot2 gplots gridExtra lmeSplines nlme reshape2]; };
-  lmodel2 = derive2 { name="lmodel2"; version="1.7-2"; sha256="0dyzxflr82k7ns824zlycj502jx3qmgrck125im2k2da34ir3m3q"; depends=[]; };
+  lmodel2 = derive2 { name="lmodel2"; version="1.7-3"; sha256="1fiin2nkffbihz1s8ixmw9lgf8mn3j9krr8iiflizk10mdv54hnb"; depends=[]; };
   lmom = derive2 { name="lmom"; version="2.6"; sha256="0wxlclzypg6dnvk09k26pdgn3nijl06xsa9rny5l03xzar01mz5s"; depends=[]; };
+  lmomPi = derive2 { name="lmomPi"; version="0.5.0"; sha256="07ggfzgvhc6kkqs8bbs6z01rbhgb0ki2y4li6r0nkiby1wcpx0py"; depends=[lmom stringr]; };
   lmomRFA = derive2 { name="lmomRFA"; version="3.1"; sha256="1gq5sjdywz1jbsshrh350zad7iifml2yj8an5xa63ghxiskrxscx"; depends=[lmom]; };
   lmomco = derive2 { name="lmomco"; version="2.2.9"; sha256="17dgzvf1rrxw3xplwvsy6dsx31b6k6f17g20zbmrh6xv3fnfb86r"; depends=[goftest Lmoments MASS]; };
-  lmridge = derive2 { name="lmridge"; version="1.0"; sha256="07zchmdcyz8agrs9q2ydcgicz3sxg893vv4rsynlpgyk2z5xnnjf"; depends=[]; };
+  lmridge = derive2 { name="lmridge"; version="1.1"; sha256="1r4g7482iz4b7jk0gj169bj96ip2wyrff1ndkwhf0qzg6r6vqa8d"; depends=[]; };
   lmtest = derive2 { name="lmtest"; version="0.9-35"; sha256="107br1l7p52wxvazs031f4h5ryply97qywg9dzrkw4ydnvqq4j9g"; depends=[zoo]; };
-  lmvar = derive2 { name="lmvar"; version="1.3.0"; sha256="0iczn4r83gdsvb8hk7av3pjf3am0z7hpqdn7xqpnyby5sqga5kv9"; depends=[Matrix matrixcalc maxLik]; };
-  loa = derive2 { name="loa"; version="0.2.43.1"; sha256="1vdj5y492v7xs29mxbldvavbvxai0adahqa4wx32k0828dxk5k8v"; depends=[lattice MASS mgcv plyr png RColorBrewer RgoogleMaps]; };
+  lmvar = derive2 { name="lmvar"; version="1.4.0"; sha256="0pwpsdmqjlj79ybx5rw82qgkjzak941d9vvdzwipjh8n51mcvwcd"; depends=[Matrix matrixcalc maxLik]; };
+  loa = derive2 { name="loa"; version="0.2.43.3"; sha256="0krrv5sicm4xvgilri8nwby6jlidx375b4sk273hxq7bhayw4hqq"; depends=[lattice MASS mgcv plyr png RColorBrewer RgoogleMaps]; };
   localdepth = derive2 { name="localdepth"; version="0.5-7"; sha256="0h0y74xnhdqa7y51ljmpz7ayznppvy2ll06wfds6200lb9cxgr7k"; depends=[circular]; };
   localgauss = derive2 { name="localgauss"; version="0.40"; sha256="0y0pcg2i7lr4wipxawn06hy0q11znhcn2ah6rqwnlyy8pab70pyq"; depends=[foreach MASS matrixStats]; };
   localsolver = derive2 { name="localsolver"; version="2.3"; sha256="1d18rihzqf1f5j9agfp8jysll7lqk1ai23hkdqkn6wwxj442llv4"; depends=[]; };
@@ -7655,26 +7817,27 @@ in with self; {
   log4r = derive2 { name="log4r"; version="0.2"; sha256="07q8m7z2sxm6n25a62invf76qakxdsijfh3272spc8xrmdmyw6rj"; depends=[]; };
   logOfGamma = derive2 { name="logOfGamma"; version="0.0.1"; sha256="0r7di0l646ycfmdjk8hli6b0v7qj0i8z3i8i7rwd3fsblb2q22vd"; depends=[]; };
   logbin = derive2 { name="logbin"; version="2.0.3"; sha256="0jvld5lh69288g80ypvqyg0s0nip9hgd8p09b91xp11vnlap0g02"; depends=[glm2 turboEM]; };
-  logconPH = derive2 { name="logconPH"; version="1.5"; sha256="05fkibgh5nzs8c4f39kzg4zyh2dfhg1k69hlx7l8p442snajsg92"; depends=[]; };
   logconcens = derive2 { name="logconcens"; version="0.16-4"; sha256="11bk03kjlb747g54axmb0nayz226g41xvanbw79aij76vjbglv7y"; depends=[]; };
   logcondens = derive2 { name="logcondens"; version="2.1.5"; sha256="1sq27klnphp74hq0l0460m9bb7lrl06mpgkg4qq8iciy3yy1mrkj"; depends=[ks]; };
   logcondens_mode = derive2 { name="logcondens.mode"; version="1.0.1"; sha256="1i2c2prk5j863p3a3q3xnsv684igfi5czz3dib7zfjldpf0qyaq7"; depends=[distr logcondens]; };
   logcondiscr = derive2 { name="logcondiscr"; version="1.0.6"; sha256="08wwxsrpflwbzgs6vb3r0f52hscxz1f4q0xabr1yqns06gir1kxd"; depends=[cobs Matrix mvtnorm]; };
   logging = derive2 { name="logging"; version="0.7-103"; sha256="1sp7q217awizb6l8c9p5dix6skpq8j7w8i088x4mm0fc0qr1ba5c"; depends=[]; };
+  logiBin = derive2 { name="logiBin"; version="0.1.0"; sha256="146jh5cpydpvv8g3ccrglm88zp8sam4airw521cxcfyg5v8qvdqs"; depends=[data_table doParallel foreach iterators partykit]; };
   logihist = derive2 { name="logihist"; version="1.0"; sha256="1q3322rh3g31c5i80aw54pln0m1jgxmbx30cn31nlh3ijkvnpq9a"; depends=[ggplot2]; };
   logistf = derive2 { name="logistf"; version="1.22"; sha256="0npwqbl8rfvn6w2y0qpkckj44mvjjccj0cn9axp2wcs03cmz0rp8"; depends=[mgcv mice]; };
   logistic4p = derive2 { name="logistic4p"; version="1.5"; sha256="0h0dxyklqc95ykyril1a3d2bdnszj5l9dqbxzh2wbfmk06prvh8b"; depends=[MASS]; };
   logisticPCA = derive2 { name="logisticPCA"; version="0.2"; sha256="07ikyn127ld0fjdw7x911wrswqwqpw4lbcz0iffvh6jfjkgyk341"; depends=[ggplot2]; };
   logitchoice = derive2 { name="logitchoice"; version="0.9.4"; sha256="1vkw7cwp7nwrsj9ifn4gz21zbw9da5rph9lr3w466zxkzdkbldqj"; depends=[]; };
-  logitnorm = derive2 { name="logitnorm"; version="0.8.34"; sha256="08jm49picrxbwr8d0c64z5gbslrliq674vr0h30gljf3r9w6s5jj"; depends=[]; };
+  logitnorm = derive2 { name="logitnorm"; version="0.8.35"; sha256="0bpj3dsxqwx96ffbx8479271nbf30pfvl7914m5af8hacqlga912"; depends=[]; };
   loglognorm = derive2 { name="loglognorm"; version="1.0.1"; sha256="0rhx769a5nmidpbpngs2vglsbkpgw9badz3kj3jfmpj873jfnbln"; depends=[]; };
   logmult = derive2 { name="logmult"; version="0.6.5"; sha256="0ak13nfgaima6g75rxbghl7xmagfp4qshj09x1fxh2r2rcags7dk"; depends=[gnm qvcalc]; };
   logspline = derive2 { name="logspline"; version="2.1.9"; sha256="1kd7ricaxbcjl6d9hx7bb5mlkr7x2h7gc8vrmfvlzxppbcghb6vw"; depends=[]; };
   lokern = derive2 { name="lokern"; version="1.1-8"; sha256="1dlyvgd2i4dckd8ic3x75r4sikwalch9b2f13xp5rhkzmfzbprxq"; depends=[sfsmisc]; };
+  lolR = derive2 { name="lolR"; version="1.0.1"; sha256="1lhhasbbpacqpc3d7bvw7q183czdjqc6xdlc7yafk7rnwgmpxjxz"; depends=[abind ggplot2 irlba MASS]; };
   lomb = derive2 { name="lomb"; version="1.0"; sha256="06lbk7s1ilqx6xsgj628wzdwmnvbs0p03hdpx8665fhddcxh3ryy"; depends=[]; };
   longCatEDA = derive2 { name="longCatEDA"; version="0.31"; sha256="0dji41lsknfwmgb2fczzm37dm97wvi45rh878w7pwlzwdh9vq8va"; depends=[]; };
   longROC = derive2 { name="longROC"; version="1.0"; sha256="1fs11vqi4hy99d7shzzdvd6ic5gay6rh2027w6j0qpd04n8q88m8"; depends=[survival]; };
-  longRPart2 = derive2 { name="longRPart2"; version="0.0.1"; sha256="0ml8c98gyvxy75wisphrz2ms4gbiss80vwb6j5k2mk028107amyb"; depends=[formula_tools ggplot2 MASS nlme rpart]; };
+  longRPart2 = derive2 { name="longRPart2"; version="0.2.3"; sha256="1vqcsxi6c4hqrpk3ns7yhghfryin1psxl38qkz2xz8cvyn58f685"; depends=[formula_tools ggplot2 MASS nlme rpart]; };
   longclust = derive2 { name="longclust"; version="1.2"; sha256="1m270fyvfz0w19p9xdv7ihy19nhrhjq2akymbp774073crznmmw0"; depends=[]; };
   longitudinal = derive2 { name="longitudinal"; version="1.1.12"; sha256="1d83ws28nxi3kw5lgd5n5y7865djq7ky72fw3ddi1fkkhg1r9y6l"; depends=[corpcor]; };
   longitudinalData = derive2 { name="longitudinalData"; version="2.4.1"; sha256="0lnvcfgj721bawl1ciz0jw83mfsnzkhg6jn824vr3qdm4rbib2vd"; depends=[class clv misc3d rgl]; };
@@ -7701,9 +7864,9 @@ in with self; {
   lpridge = derive2 { name="lpridge"; version="1.0-7"; sha256="0nkl70fwzra308bzlhjfpkxr8hpd8v1xdnah7nscxa10qlisgr2k"; depends=[]; };
   lqa = derive2 { name="lqa"; version="1.0-3"; sha256="141r2cd9kybi6n9jbdsvhza8jdxxqch4z3qizvpazjy8qifng29q"; depends=[]; };
   lqmm = derive2 { name="lqmm"; version="1.5.3"; sha256="1gl609irhxk7qi4x8as2xylc6iybm9jyrnm7dvb92nxl0ksp44v7"; depends=[nlme SparseGrid]; };
-  lqr = derive2 { name="lqr"; version="1.5"; sha256="1rcs6p8jx86r40ys8qiz5gynkfqyg3lkv7wsv551w9c5m3s1z2gy"; depends=[ghyp spatstat]; };
+  lqr = derive2 { name="lqr"; version="1.7"; sha256="110c18wc3y3nkdwjgrksw20kvvy65822njrpy4gwb100ifigw0v7"; depends=[ghyp spatstat]; };
   lrequire = derive2 { name="lrequire"; version="0.1.3"; sha256="03c8h9v2xhlv7bj5jv117a27gaqaly2kdxs9zyihsm9yh9rg3d79"; depends=[]; };
-  lrgs = derive2 { name="lrgs"; version="0.5.1"; sha256="1hzcmrvax03bzrljnqskmnnpsw6amnwcfygnls727369h0dbzc4a"; depends=[mvtnorm]; };
+  lrgs = derive2 { name="lrgs"; version="0.5.3"; sha256="0aqz07vg3z52lq224mapwgwr9mspa7aswzdfngg6x933aqsha4gj"; depends=[mvtnorm]; };
   lrmest = derive2 { name="lrmest"; version="3.0"; sha256="1yddkgza672z9y0ipgl92pg9prhmr387zsqf0qbi9k2yzfz2vvs6"; depends=[MASS psych]; };
   lsa = derive2 { name="lsa"; version="0.73.1"; sha256="1af8s32hkri1hpngl9skd6s5x6vb8nqzgnkv0s38yvgsja4xm1g5"; depends=[SnowballC]; };
   lsasim = derive2 { name="lsasim"; version="1.0.1"; sha256="0bwk6bv0wp30v6p55nyd1hcvwnjjddwccyy1swf6sg7lw3fy657p"; depends=[]; };
@@ -7713,7 +7876,7 @@ in with self; {
   lsgl = derive2 { name="lsgl"; version="1.3.6"; sha256="0zkv5xgwrnwx0w0qpzsg7krd7fdnlr3a85q64xj1wx0gd578dqq6"; depends=[BH Matrix Rcpp RcppArmadillo RcppProgress sglOptim]; };
   lshorth = derive2 { name="lshorth"; version="0.1-6"; sha256="0nbjakx0zx4fg09fv26pr9dlrbvb7ybi6swg84m2kwjky8399vvx"; depends=[]; };
   lsl = derive2 { name="lsl"; version="0.5.6"; sha256="1hwzklx1qp5ljc059j2hridg3caw4cgn7rbqs8xh2arzcvqdw3rb"; depends=[ggplot2 lavaan reshape2]; };
-  lslx = derive2 { name="lslx"; version="0.6.0"; sha256="0in84pq3vf7jlzsb1g6xb0vjcsb8ic4msn5ika1l6k2hsh8v31mm"; depends=[ggplot2 lavaan R6 Rcpp RcppEigen]; };
+  lslx = derive2 { name="lslx"; version="0.6.1"; sha256="0zl3gcxc0410zm88kdzqywrqsas7vas4w7mxs2ad6wcclf33dwb5"; depends=[ggplot2 lavaan R6 Rcpp RcppEigen]; };
   lsmeans = derive2 { name="lsmeans"; version="2.27-61"; sha256="0qw4lkgaynld56ywvdyy5nqvq7c6r2v24gsy54rkcw2n4xhlnahm"; depends=[coda estimability multcomp mvtnorm nlme plyr xtable]; };
   lspline = derive2 { name="lspline"; version="1.0-0"; sha256="0bc1nfpp1r5fi8rrg295k4r8pm03baqplrzwmk3sn4kdbp0apvgk"; depends=[]; };
   lspls = derive2 { name="lspls"; version="0.2-1"; sha256="1g27fqhnx9db0zrxbhqr76agvxy8a5fx1bfy58j2ni76pki1y4rl"; depends=[pls]; };
@@ -7722,26 +7885,26 @@ in with self; {
   lss = derive2 { name="lss"; version="0.52"; sha256="1fvs8p9rhx81xfn450smnd0i1ym06ar6nwwcpl74a66pfi9a5sbp"; depends=[quantreg]; };
   ltbayes = derive2 { name="ltbayes"; version="0.4"; sha256="0kv5k56hmc1m7bv5pmmmk46822szsgwqgpwydn0x56az7xn6hjk6"; depends=[mcmc MHadaptive numDeriv]; };
   ltm = derive2 { name="ltm"; version="1.1-0"; sha256="1gxjz3rn5bacv7xdlinzk6rdcwragb76grjpk5wqs4shqbk0rld2"; depends=[MASS msm polycor]; };
-  ltmle = derive2 { name="ltmle"; version="1.0-0"; sha256="04rqy5xi84jwzv7j9qpwp3im79dxcabsr6cvpgdhji0n884rgnzg"; depends=[Matrix matrixStats speedglm]; };
+  ltmle = derive2 { name="ltmle"; version="1.0-1"; sha256="0g3nybhxz7mivqkzvlzkasc1m489s4fsi4874wvlhqg3x3mww0x9"; depends=[Matrix matrixStats speedglm]; };
   ltsa = derive2 { name="ltsa"; version="1.4.6"; sha256="10wmw9r00400ng2zlysd8jqgypjclshxj83x32002j2a9cz4f186"; depends=[]; };
   ltsbase = derive2 { name="ltsbase"; version="1.0.1"; sha256="16p5ln9ak3h7h0icv5jfi0a3fbw5wdqs3si69sjbn8f5qs2hz7yp"; depends=[MASS robustbase]; };
-  ltsk = derive2 { name="ltsk"; version="1.0.4"; sha256="1p026ryq31iw7d8mbi4m2q43g5frj47387w8g46j50bcv11hh2zm"; depends=[fields gstat sp]; };
+  ltsk = derive2 { name="ltsk"; version="1.0.5"; sha256="0x142w2l6qaqw1kmx5kix7lkadaw2kl8dqx11d091vqj2imi9wlr"; depends=[fields gstat sp]; };
   ltxsparklines = derive2 { name="ltxsparklines"; version="1.1.2"; sha256="1jnygg7wm2768lrrzball8rn8f60xy4nc3a18h4d32jpnbhifj13"; depends=[]; };
-  lubridate = derive2 { name="lubridate"; version="1.7.1"; sha256="0pzvazzybzvln3y676yims7whsc74g8i7kgf2nsfbxdq5943z349"; depends=[Rcpp stringr]; };
+  lubridate = derive2 { name="lubridate"; version="1.7.2"; sha256="0k417a1xp5gxf77ycbnx5apzpc5d25sjm83ss7wmqpbnhnr5dcav"; depends=[Rcpp stringr]; };
   luca = derive2 { name="luca"; version="1.0-5"; sha256="1jiqwibkrgga4ahz0qgpfkvrsxjqc55i2nwnm60xddb8hpb6a6qx"; depends=[genetics survival]; };
   lucid = derive2 { name="lucid"; version="1.4"; sha256="1kwl9h7ynp8nhny51xskrbgc3060bawxjkdijhsjzss2hbbygwds"; depends=[nlme]; };
   lucr = derive2 { name="lucr"; version="0.2.0"; sha256="0v5g72cl9fg3b3ix34bsmjwwqrnm4ivgcd5mm98c5jd8rrz1xkwq"; depends=[httr Rcpp]; };
-  ludic = derive2 { name="ludic"; version="0.1.5"; sha256="03ywna9fd2ypwchwx58ccmlxjdnx7zav7pqxwrc5bh3hrfbsxl13"; depends=[fGarch landpred Matrix Rcpp RcppArmadillo]; };
+  ludic = derive2 { name="ludic"; version="0.1.6"; sha256="0srs3bx9cw89mlpg8b8vcmz2gnsv729j3n23pnnxgbh2w7xf705b"; depends=[fGarch landpred Matrix Rcpp RcppArmadillo]; };
   lulcc = derive2 { name="lulcc"; version="1.0.2"; sha256="1vlaidyqgx5vnf8w2y1a1jmmq7z4195avnv1mryhh414r5r1kpy0"; depends=[lattice raster rasterVis ROCR]; };
   lumberjack = derive2 { name="lumberjack"; version="0.2.0"; sha256="0yn6482wrwinabys3awp0jjnzs6mnv29jjpvr980m1jm15nwva4g"; depends=[R6]; };
-  lumendb = derive2 { name="lumendb"; version="0.2.2"; sha256="0x1k90h6aw7fpvmgbbdmkqvgxfnn4w5xxfck7f4r7zhaxfqbzp2s"; depends=[httr xml2]; };
   lunar = derive2 { name="lunar"; version="0.1-04"; sha256="0nkzy6sf40hxkvsnkzmqxk4sfb3nk7ay4rjdnwf2zym30qax74kk"; depends=[]; };
+  lutz = derive2 { name="lutz"; version="0.1.0"; sha256="1yf1bd005nhr5afwzs9y9h36q6hs93c8bfhgjwjvhsjrdl3rz26i"; depends=[V8]; };
   luzlogr = derive2 { name="luzlogr"; version="0.2.0"; sha256="0n0cm94aianwcypa0gwdjvyy3dwbkfv6zi1gq2jn57b41fg20lq5"; depends=[assertthat]; };
   lvec = derive2 { name="lvec"; version="0.1.1"; sha256="1mpw01z0n0cql451qmi0b77pbfkhx6jyc4zzs5nl82jb6x3y20wn"; depends=[BH]; };
   lvm4net = derive2 { name="lvm4net"; version="0.2"; sha256="0al0answp3rngq69bl3ch6ylil22wdp1c047yi5gbga853p7db0c"; depends=[ellipse ergm igraph MASS network]; };
   lvnet = derive2 { name="lvnet"; version="0.3.2"; sha256="0ynp7399q98dgh51fkw1r1z8iy3qm41ny887a955n8kp8pp9l737"; depends=[corpcor dplyr glasso lavaan Matrix mvtnorm OpenMx psych qgraph semPlot]; };
   lvplot = derive2 { name="lvplot"; version="0.2.0"; sha256="01sisj2vbx2yb5w9cjzyaf9j46vh4kkw05xccq1f7wmsg69zmj6b"; depends=[ggplot2 RColorBrewer]; };
-  lwgeom = derive2 { name="lwgeom"; version="0.1-0"; sha256="03w1dp6r1zhjkwpzfv9864vc7bck0kqg3k8y3fq6c33np8gdqjvq"; depends=[Rcpp sf units]; };
+  lwgeom = derive2 { name="lwgeom"; version="0.1-4"; sha256="0x58a04sklrr6vr38hbd2900b3bigdfj7zyk6pzj9y7yy5mr2cjg"; depends=[Rcpp sf units]; };
   lxb = derive2 { name="lxb"; version="1.5"; sha256="16x1mvhxqhvibzmv6mlqcmkgic2sha1xagf7r2azmn4z8x1m9w6n"; depends=[]; };
   lymphclon = derive2 { name="lymphclon"; version="1.3.0"; sha256="1jns41sk2rx1j3mg06dzy434k30gpfhbkn6s47fmyv1y8701vfl0"; depends=[corpcor expm MASS]; };
   m2b = derive2 { name="m2b"; version="1.0"; sha256="0agzw67mmwrw1f61yn24z5w1pgjssdapg3li0a53i3ylnij45mzr"; depends=[caret caTools e1071 geosphere ggplot2 randomForest]; };
@@ -7765,21 +7928,21 @@ in with self; {
   macc = derive2 { name="macc"; version="1.0.1"; sha256="1qj4mlikbqrxa6m46527xmxdbk7b3l95z6jdgpmi0ifywjiv52a4"; depends=[car lme4 MASS nlme optimx]; };
   machQA = derive2 { name="machQA"; version="0.1.4"; sha256="1rdrjy9sxql2c9y691a1jrmgsv7m1ihsschixxb6wc7aahf7mav6"; depends=[machina plyr]; };
   machina = derive2 { name="machina"; version="0.1.6"; sha256="009mzqb5jgnilj9b5ldmm5600008bljlqacm8jjxvqsfnfdfg8zv"; depends=[DT httr jsonlite lubridate rhandsontable xts]; };
-  macleish = derive2 { name="macleish"; version="0.3.1"; sha256="0rzla5laj1fhr31ajv1nlaphbcx25clpjm8j624l31ginpk43pja"; depends=[DBI dplyr etl lubridate readr rgdal rgeos sp]; };
+  macleish = derive2 { name="macleish"; version="0.3.2"; sha256="1kna1wq3p6xfzfdhw8dpdfvy4l656xcrra1f0ir86a815pm2a8l3"; depends=[dplyr etl lubridate readr rgdal rgeos sp]; };
   mada = derive2 { name="mada"; version="0.5.8"; sha256="17d41kpxjf6h8j83w6jhxm71f03nc8i2aw0xaqzrpcf5rxxy8wv8"; depends=[ellipse mvmeta mvtnorm]; };
   maddison = derive2 { name="maddison"; version="0.1"; sha256="1ji51wnj0ybjd30b4bwn5npyswrmcfrbxcmdlngwzvca1knh8g1c"; depends=[]; };
-  madness = derive2 { name="madness"; version="0.2.2"; sha256="0facd1km06kjd70prkjkns8x2nyavj4m7lgiyxd7gpr9plba5wmr"; depends=[expm Matrix matrixcalc]; };
+  madness = derive2 { name="madness"; version="0.2.3"; sha256="0qmqgrjxb0853m9kdi8cl1b9q9dljdi2zylw22asfv77f323413z"; depends=[expm Matrix matrixcalc]; };
   madr = derive2 { name="madr"; version="1.0.0"; sha256="0lzg75kphz4a0w6n0jbsq87g72jvrbkyas4j813mryq2nv4lmsl4"; depends=[]; };
   madrat = derive2 { name="madrat"; version="1.22.1"; sha256="0wk2svhi4209p8ab8i2g9q22kswpisphb2a9ln5lzwdhnryk4ya9"; depends=[digest magclass spam stringr]; };
   mads = derive2 { name="mads"; version="0.1.5"; sha256="1ac34iff9hvl1bxk3gs5s3i311g9y59nd6v9jhvnfd6wfhck7krs"; depends=[mrds]; };
   madsim = derive2 { name="madsim"; version="1.2.1"; sha256="11gfyimbz363p5xy1x6rsz5fcgzcr55myc5aaz5lazjkcnfn17aq"; depends=[]; };
   mafs = derive2 { name="mafs"; version="0.0.3"; sha256="1apacrk8y5b5ids62vd1kn2k28bya9pydxxmdw2dhjyzkgrakdhn"; depends=[cmprsk colorspace CombMSC Epi etm forecast forecastHybrid fracdiff ggplot2 ggseas gtable munsell numDeriv plyr quadprog Rcpp scales tictoc tidyr timeDate tseries zoo]; };
   magclass = derive2 { name="magclass"; version="4.51.1"; sha256="1p4pbwjkn9ic3vqjh9m4b18s78f8wx0815n4dyg9pin8p14klzil"; depends=[abind maptools ncdf4 reshape2 sp]; };
-  magic = derive2 { name="magic"; version="1.5-6"; sha256="1399w1zhz79nj8cdhslybncd9h6rylfhb548nv22ip0dxxdkyv0v"; depends=[abind]; };
+  magic = derive2 { name="magic"; version="1.5-8"; sha256="083cgpp3v03li0h8597b3g21pd9lkbmn9pyssblnhc800mpc52vz"; depends=[abind]; };
   magicLamp = derive2 { name="magicLamp"; version="0.1.0"; sha256="1nfcnbqd6vawz8l3vgkbhmm462xdvaa4pn6axzmz8hl05xv2k3cv"; depends=[httr tibble]; };
   magicaxis = derive2 { name="magicaxis"; version="2.0.3"; sha256="08nkf9k2ijlm52ybncfiwrghy911wpvwpvdvllcz2d4slk1vdakj"; depends=[celestial mapproj MASS plotrix sm]; };
   magicfor = derive2 { name="magicfor"; version="0.1.0"; sha256="07l33fczr1x42sfxrsqq4q6r65sdflin6l8f5cgclnvx1858jdip"; depends=[]; };
-  magick = derive2 { name="magick"; version="1.5"; sha256="1zjj7gw44gh2m0k2w9s66hh4bd6z0ww2m5lik7fljpifr6h9p1c5"; depends=[curl knitr magrittr Rcpp]; };
+  magick = derive2 { name="magick"; version="1.6"; sha256="1xkhg4g7n5g0ri852nbdb19lnqfl16g1w08qpn5riy6fah2vrhd1"; depends=[curl knitr magrittr Rcpp]; };
   magree = derive2 { name="magree"; version="1.0"; sha256="1qkd6p5g3aigcb0f4d08gc5323alvahzmazm3bzsmz1w033xd1hh"; depends=[]; };
   magrittr = derive2 { name="magrittr"; version="1.5"; sha256="1s1ar6rag8m277qcqmdp02gn4awn9bdj9ax0r8s32i59mm1mki05"; depends=[]; };
   mail = derive2 { name="mail"; version="1.0"; sha256="1m89cvw5ba4d87kp2dj3f8bvd6sgj9k56prqmw761q919xwprgw6"; depends=[]; };
@@ -7796,23 +7959,23 @@ in with self; {
   manhattanly = derive2 { name="manhattanly"; version="0.2.0"; sha256="185fkakx4v35n4gmlpk2kfm2bm8p320q4khkw936m09zx3aqz398"; depends=[ggplot2 magrittr plotly]; };
   manifestoR = derive2 { name="manifestoR"; version="1.2.4"; sha256="1hd4qsa2xsa1dq5jnwh1bph34glkpaabjmsnavdjhkfzjilp32ya"; depends=[base64enc dplyr functional httr jsonlite magrittr NLP psych tibble tm zoo]; };
   manipulate = derive2 { name="manipulate"; version="1.0.1"; sha256="1klknqdfppi5lf6zbda3r2aqzsghabcsaxmvd3vw3cy3aa984zky"; depends=[]; };
-  manipulateWidget = derive2 { name="manipulateWidget"; version="0.7.0"; sha256="1xiiaaay8szmw36vli3kgg4mn73hjdbaqq0w0l01wc2qhv3fa30n"; depends=[base64enc htmltools htmlwidgets knitr lazyeval miniUI shiny]; };
+  manipulateWidget = derive2 { name="manipulateWidget"; version="0.8.0"; sha256="19vcf3q2q8r53dygc8kh7pbcbjs9q6knylz2jnc9pwxq3wdkbrp7"; depends=[base64enc codetools htmltools htmlwidgets knitr miniUI shiny]; };
   mapReasy = derive2 { name="mapReasy"; version="1.0"; sha256="13va0z967ckwxnnianki5aj66km0x6r37nj4mz9qd3b0bps4g2kj"; depends=[Hmisc rgdal sp]; };
   mapStats = derive2 { name="mapStats"; version="2.4"; sha256="18pp1sb9p4p300ffvmzjrg5bv1i7f78mhpggq83myc26c3a593na"; depends=[classInt colorspace Hmisc lattice maptools RColorBrewer reshape2 sp survey]; };
   mapdata = derive2 { name="mapdata"; version="2.2-6"; sha256="0k3hsnyvax20jph384gca10rl7a9fcglgkqcjsc5hndx3qrwpanv"; depends=[maps]; };
   mapedit = derive2 { name="mapedit"; version="0.3.2"; sha256="0x1jyll45kx1q3bq3visyq75jvinhw3h0yy1n1rams61vvxrqfxk"; depends=[dplyr htmltools htmlwidgets jsonlite leaflet leaflet_extras mapview miniUI sf shiny]; };
   mapfit = derive2 { name="mapfit"; version="0.9.7"; sha256="16a318bz3my27qj0xzf40g0q4bh9alg2bm6c8jbwgswf1paq1xmx"; depends=[Matrix]; };
   mapfuser = derive2 { name="mapfuser"; version="0.1.2"; sha256="1q7l6rfs6dv76ifizfqq4pdpjpb2zwzd3vvrnhdzh8vw2mrlqcjg"; depends=[doParallel dplyr foreach ggplot2 igraph lazyeval LPmerge mgcv plotly stringi tidyr visNetwork]; };
-  mapmisc = derive2 { name="mapmisc"; version="1.6.3"; sha256="0akrrm5zrsgq0i69m1wb43xy5nh2w8fa05zz6fpwdmpjy4x09c2g"; depends=[raster sp]; };
+  mapmisc = derive2 { name="mapmisc"; version="1.7.0"; sha256="0m8a0zzdrmqkkv9clfar9acij80fmanqny08g9xlir14620aq38c"; depends=[raster sp]; };
   mapplots = derive2 { name="mapplots"; version="1.5"; sha256="09sk78a0p8hlwhk3w2dwvpb0a6p7fqdxyskvz32p1lcav7y3jfrb"; depends=[]; };
   mapproj = derive2 { name="mapproj"; version="1.2-5"; sha256="0rjz37r4rizk2c6jaf54f0kfb60dqv6b262cnhiwjl55d4x6l0pk"; depends=[maps]; };
   mapr = derive2 { name="mapr"; version="0.3.4"; sha256="14f7zfzxb1h935bbybj2l2n4a62cnq0wvgmc09in0fvnl75jl971"; depends=[ggplot2 gistr jsonlite leaflet RColorBrewer rworldmap sp spocc]; };
   maps = derive2 { name="maps"; version="3.2.0"; sha256="0577f3b5d3a7djl7r0miy9mzr6xq6jb32p8nyrma7m2azasbwyj3"; depends=[]; };
-  mapsapi = derive2 { name="mapsapi"; version="0.2.0"; sha256="0nw2v5h2pmwm6viic6lrhaxbdd7scnvi53c2z5s462wi33igp3sm"; depends=[bitops magrittr sf xml2]; };
+  mapsapi = derive2 { name="mapsapi"; version="0.3.0"; sha256="070dckm5dkicmwkpji4zvap9h9rl3n3l7fxhz2ryslblbrzx70fn"; depends=[bitops magrittr plyr sf xml2]; };
   maptools = derive2 { name="maptools"; version="0.9-2"; sha256="075lmb3b62171cw2dg8fv1vwmvfzg39r1ji7jwb8s5k9dz88ry1v"; depends=[foreign lattice sp]; };
   maptpx = derive2 { name="maptpx"; version="1.9-2"; sha256="1i5djmjg0lsi7xlkbvn90njq1lbyi74zwc2nldisay4xsbgqg7fj"; depends=[slam]; };
   maptree = derive2 { name="maptree"; version="1.4-7"; sha256="1k7v84wvy6wz6g0dyiwvd3lvf78rlfidk60ll4fz7chvr2nrqdp4"; depends=[cluster rpart]; };
-  mapview = derive2 { name="mapview"; version="2.2.0"; sha256="13r9kvhhmrfzfvmk8wy6jmhaklralm3h3mi65hlaybmc22f7ylp7"; depends=[base64enc brew gdalUtils htmltools htmlwidgets lattice leaflet png raster Rcpp satellite scales sf sp viridisLite webshot]; };
+  mapview = derive2 { name="mapview"; version="2.3.0"; sha256="07sp891j8dqryjibwdnb2j0d5kjnbndl13hgazqrk5rg4phj0hl5"; depends=[base64enc brew gdalUtils htmltools htmlwidgets lattice leaflet png raster Rcpp satellite scales sf sp svglite uuid viridisLite webshot]; };
   mar1s = derive2 { name="mar1s"; version="2.1"; sha256="0psjva7nsgar5sj03adjx44pw0sdqnsd96m4g6k8d76pv30m1g7l"; depends=[cmrutils fda zoo]; };
   march = derive2 { name="march"; version="1.4"; sha256="1wfhm33k2j5yim56sg0wd02ypfhlp9fc138vmdsdjp6nh4y23hnj"; depends=[]; };
   marcher = derive2 { name="marcher"; version="0.0-2"; sha256="0hcxbfrwniih4kvx5sxhlffz1pc87kf52v8hvaf193rhhdykis5q"; depends=[magrittr Matrix minpack_lm mvtnorm numDeriv plyr RColorBrewer scales zoo]; };
@@ -7823,8 +7986,8 @@ in with self; {
   marinespeed = derive2 { name="marinespeed"; version="0.1.0"; sha256="1r9bpggb88px8149dsga3xmkjhjq6ybs6a5kp60qz28iyr183mar"; depends=[bit geosphere sp]; };
   markdown = derive2 { name="markdown"; version="0.8"; sha256="1vcgsh2m2f5kfgappgg71nbf04ff0j1sbk668krjs3r2n89dk3sk"; depends=[mime]; };
   marked = derive2 { name="marked"; version="1.1.13"; sha256="0zgfd7fdcrvvqnlgzarly16zjnipshxsa1g3j9jqc5kbqvh7fnh2"; depends=[coda expm lme4 Matrix numDeriv optimx R2admb Rcpp TMB truncnorm]; };
-  markmyassignment = derive2 { name="markmyassignment"; version="0.6.1"; sha256="167q4fwn2ssqn588wx3ig923rcr74m95na1z1wdfy67jczsk492l"; depends=[codetools httr lazyeval testthat yaml]; };
-  markophylo = derive2 { name="markophylo"; version="1.0.4"; sha256="12np5rg59wjyh1mfhhfh115ziciba973fjvbrhn4qzdnry1mwbdb"; depends=[ape numDeriv phangorn Rcpp RcppArmadillo]; };
+  markmyassignment = derive2 { name="markmyassignment"; version="0.8.1"; sha256="1y388s73b1zs482d1d7z40kg4hizp46lc3279xspm2ryx4m49mzj"; depends=[checkmate codetools httr lazyeval rlang testthat yaml]; };
+  markophylo = derive2 { name="markophylo"; version="1.0.6"; sha256="1gyj3ykwh4ljrb5s80hihy7wl89y3p4xkckspvv4ynl9lnsbm7cs"; depends=[ape numDeriv phangorn Rcpp RcppArmadillo]; };
   markovchain = derive2 { name="markovchain"; version="0.6.9.8-1"; sha256="1av89829fwnf2bll7b75v2vrglw4130d5c42c3i1fiqh54jxjy7k"; depends=[expm igraph matlab Matrix Rcpp RcppArmadillo RcppParallel]; };
   marl = derive2 { name="marl"; version="1.0"; sha256="0rndnf3rbcibv3gsrw1kfp5zhg37cw9wwlz0b7dbwprd0m71l3pm"; depends=[]; };
   marmap = derive2 { name="marmap"; version="0.9.6"; sha256="1b0mpygk18ri0xs9f56j2g7zmka7krnw7fmh9m9xisbvq2g23g92"; depends=[adehabitatMA DBI gdistance geosphere ggplot2 ncdf4 plotrix raster reshape2 RSQLite shape sp]; };
@@ -7833,23 +7996,23 @@ in with self; {
   matR = derive2 { name="matR"; version="0.9"; sha256="0lih3g2z6rxykprl3s529xcf466bpzpsv4l20dkgx1fgfslfcl2p"; depends=[BIOM_utils MGRASTer]; };
   matchMulti = derive2 { name="matchMulti"; version="1.1.6"; sha256="05nkrncrf7vq2bmqbhm9n6p6cyb4drbhjrrfdcw6qcdgvh3bbiy0"; depends=[coin Hmisc MASS mvtnorm plyr rcbsubset weights]; };
   matchbook = derive2 { name="matchbook"; version="1.0.7"; sha256="0xfqg8z2zkn215kqmjjkqdwrgsk7cn4jdpxfgd6razhcbvflg48j"; depends=[]; };
-  matchingMarkets = derive2 { name="matchingMarkets"; version="0.3-3"; sha256="0jpx4k82h0mdhbwb1jc8g18qjsr9448m6d69zii99bdinsd637rv"; depends=[lattice lpSolve partitions Rcpp RcppArmadillo RcppProgress rJava]; };
-  matchingR = derive2 { name="matchingR"; version="1.2.1"; sha256="09vx3yqaq0pq341v8rm2hjxx0aza0bnh9iffrygwbhls7fi7kn7y"; depends=[Rcpp RcppArmadillo]; };
+  matchingMarkets = derive2 { name="matchingMarkets"; version="0.3-4"; sha256="1qp876xnqrr4rz9a8xc0hw3rzfhjw9nl4qmzcrr9r03xj2dn9i1p"; depends=[lattice lpSolve partitions Rcpp RcppArmadillo RcppProgress rJava]; };
+  matchingR = derive2 { name="matchingR"; version="1.3.0"; sha256="1rpw5a52alh5diiqr7f87vhpgp3w3f8lg8wkaqvr5idid9fkll1i"; depends=[Rcpp RcppArmadillo]; };
   matconv = derive2 { name="matconv"; version="0.3.2"; sha256="0vnmqz5vzv5n0cfpgr30gkl0pv8p2b5cp3ap6mn01sxd671lx38z"; depends=[]; };
-  matdist = derive2 { name="matdist"; version="0.1.0"; sha256="0g7ysqwh8nd0150yj5799rzp9586nh98rq4lpyavsjj26kp3if0j"; depends=[Rcpp RcppArmadillo RcppGSL RcppZiggurat Rlinsolve]; };
   mateable = derive2 { name="mateable"; version="0.3.1"; sha256="1ka9xxicibpfg6k3njq5f5576jwj734r1mb46a2cmiyq676ks7pp"; depends=[FNN Rcpp sn]; };
   mathgraph = derive2 { name="mathgraph"; version="0.9-11"; sha256="0xikgzn24p0qqlrmaydmjk5yz5pq2rilsvpx86n3p2k2fc3wpwjy"; depends=[]; };
   mathpix = derive2 { name="mathpix"; version="0.2.0"; sha256="0a2yybhim2l08n03505ks8vzk8w8azlz3pngsczzd42dqfdphi9q"; depends=[base64enc httr magick purrr rstudioapi texPreview]; };
   matie = derive2 { name="matie"; version="1.2"; sha256="1ymx49cyvz63imqw5n48grilphiqvvdirwsrv82p7jgxdyav2xv0"; depends=[cba dfoptim gplots igraph mvtnorm seriation]; };
   matlab = derive2 { name="matlab"; version="1.0.2"; sha256="0m21k2vzbc5d3c93p2hk4208xyd2av2slg55q5j1ibjidiryqgd2"; depends=[]; };
-  matlabr = derive2 { name="matlabr"; version="1.4.3"; sha256="1bjwr5aa4piicgwwiqnzyknlizrj8ik8lgr0fwj8p8ajh12s2vpn"; depends=[stringr]; };
+  matlabr = derive2 { name="matlabr"; version="1.5.0"; sha256="0gy639fv0b85h4z96b2b3m635q4w62q63kfxfqny3pwr0r5vsc2p"; depends=[stringr]; };
   matlib = derive2 { name="matlib"; version="0.8.1"; sha256="080mbmr1lb5ha5ql40hv0idcnnbyaai46c42z756kdyq9pdzcabf"; depends=[car rgl]; };
   matpow = derive2 { name="matpow"; version="0.1.1"; sha256="1a6q21ba16qfdpykmjwgmrb1kkvvyx48qg8cbgpdmch0vhibcgcp"; depends=[]; };
   matrixLaplacian = derive2 { name="matrixLaplacian"; version="1.0"; sha256="1ixqdv3sz3sc79wn3vqhlq79j7x7cvl878m5hgvbcg6klfvlmmci"; depends=[scatterplot3d]; };
-  matrixStats = derive2 { name="matrixStats"; version="0.52.2"; sha256="19fjf19cr0p3j9pj17myz39zpi5bh7ci72db3la9my09n6k6mnir"; depends=[]; };
+  matrixStats = derive2 { name="matrixStats"; version="0.53.1"; sha256="0bkiz5fm09d3512mfr2ymj9qsb1b8aic5l5m6fkaf5j7nsgvqw6z"; depends=[]; };
   matrixcalc = derive2 { name="matrixcalc"; version="1.0-3"; sha256="1c4w9dhi5w98qj1wwh9bbpnfk39rhiwjbanalr8bi5nmxkpcmrhp"; depends=[]; };
   matrixpls = derive2 { name="matrixpls"; version="1.0.5"; sha256="04sshb88rq2mp3y4rrs6nkzr4kc380vx380r911c7j975l55a183"; depends=[assertive lavaan MASS matrixcalc psych]; };
-  mau = derive2 { name="mau"; version="0.1.0"; sha256="0ssvj089smndr7h73la4gnn3dp63p8zkimm19q3rsw4lajv8ws79"; depends=[data_table ggplot2 gtools igraph RColorBrewer stringr]; };
+  matrixsampling = derive2 { name="matrixsampling"; version="1.0.0"; sha256="0bjqdf19alzv33d9b037y135hqfp9n6z35m9j7j95h27gpna5wbc"; depends=[keep]; };
+  mau = derive2 { name="mau"; version="0.1.2"; sha256="1wgiai8f1kbjh9hfwv4m0kavd44ib5xb33p8m16zpawnw14m7sj5"; depends=[data_table ggplot2 gtools igraph RColorBrewer Rdpack stringr]; };
   maxLik = derive2 { name="maxLik"; version="1.3-4"; sha256="0jjb5kc7dvx940ybg7b7z9di79v75zm2xlb0kj2y7rmi45vvh6hq"; depends=[miscTools sandwich]; };
   maxTPR = derive2 { name="maxTPR"; version="0.1.0"; sha256="13x5rz0mfha5pzahkk4x67ncz9v77sa690cyl6wigwsldsrvzr3h"; depends=[aucm Rsolnp]; };
   maxent = derive2 { name="maxent"; version="1.3.3.1"; sha256="1skc7d0p6kg0gi1bpgaqn2dmxjzbvcphx5x3idpscxfbplm5v96p"; depends=[Rcpp SparseM tm]; };
@@ -7857,8 +8020,9 @@ in with self; {
   maxmatching = derive2 { name="maxmatching"; version="0.1.0"; sha256="1xbwrhmr8gzvlcprib7nzvqrcd355bhx7wkqxrvfk4g7dvskf9ka"; depends=[igraph]; };
   maxnet = derive2 { name="maxnet"; version="0.1.2"; sha256="1rfcylbv068pz4jgry5ijszwf5fibz566s5iv0ar8dhv0fhjr86z"; depends=[glmnet]; };
   maxstat = derive2 { name="maxstat"; version="0.7-25"; sha256="114z1rwxwvk05ijjhdppzm148n1h192fp0w12ky10zkrhf6kphbg"; depends=[exactRankTests mvtnorm]; };
-  mazeGen = derive2 { name="mazeGen"; version="0.1.2"; sha256="05lsb7ldk6nzmfaklbvkcb4n5sfnimgcv5vgilblw5awzhavj5vm"; depends=[igraph]; };
-  mazealls = derive2 { name="mazealls"; version="0.1.0"; sha256="0qwjafdd0qkankl6alcpjg17bx7lvvg0qn7p6zk8p3l3ibg5ikwc"; depends=[TurtleGraphics]; };
+  mazeGen = derive2 { name="mazeGen"; version="0.1.3"; sha256="192xygg3l4rpqp49sgd5hpp4h3f8wjhyldn0l8abxhsks7jd2kfb"; depends=[igraph]; };
+  mazealls = derive2 { name="mazealls"; version="0.2.0"; sha256="14j6syw1zkgs4cnmxzqpm6klmgvck2gg97wkzmy9al6n0biy8gmb"; depends=[TurtleGraphics]; };
+  mazeinda = derive2 { name="mazeinda"; version="0.0.1"; sha256="0ns4ib73y4fghf7p1wg0a05js4mqr66dpp49p1h039pqrb0f1vwd"; depends=[foreach]; };
   mbbefd = derive2 { name="mbbefd"; version="0.8.8.1"; sha256="0akga4p8nj5nnfv18gk84mhl2nd6s10k1c1rh730sd44qm6zpiai"; depends=[actuar alabama fitdistrplus gsl MASS Rcpp]; };
   mbclusterwise = derive2 { name="mbclusterwise"; version="1.0"; sha256="1ilqaxcxf1k3ck910s0xqwnp88w8ag5rn1dpvaa1i7jlcldsbnhp"; depends=[ade4 doParallel foreach kknn]; };
   mbest = derive2 { name="mbest"; version="0.5"; sha256="0l6vmcqkd2b0b90jmsswrhbdmhq2x92g7sr2l99rp7xp1cxdq02w"; depends=[bigmemory foreach lme4 logging nlme]; };
@@ -7875,12 +8039,11 @@ in with self; {
   mcPAFit = derive2 { name="mcPAFit"; version="0.1.4"; sha256="1h5kiry8bvdrgyqf7cqsag0b7rscwc7phayzf6h4css1667bvm0g"; depends=[PAFit RColorBrewer Rcpp]; };
   mcbiopi = derive2 { name="mcbiopi"; version="1.1.2"; sha256="12h4bv3hx1m6bsqdxj5n3b5gh98ms508am8pigz7ckmv0xkyhx85"; depends=[]; };
   mcc = derive2 { name="mcc"; version="1.0"; sha256="0p661a870bvh3xhcahqqq85azn9rjl3vacjy96jsdn86irj4s0vi"; depends=[]; };
-  mcca = derive2 { name="mcca"; version="0.1.0"; sha256="1ymnpqqgxacljr1y6hlr2agdygzlvsjjqili17289w2p14mljxpi"; depends=[e1071 MASS nnet rpart]; };
+  mcca = derive2 { name="mcca"; version="0.2.0"; sha256="01c7dp9m8vqffhq0ixsqcfw40jsmb6dwiblym31h84f9s0x4f00j"; depends=[e1071 MASS nnet pROC rpart]; };
   mcclust = derive2 { name="mcclust"; version="1.0"; sha256="00qprmsjwbn2d0jl7p9mz8pv7k8ld3mzk862pr1grigk0lqwhx06"; depends=[lpSolve]; };
   mccr = derive2 { name="mccr"; version="0.4.4"; sha256="1scqds1yx317qmjappy2h1m564dcmsqqfpdm8pm3plalag16xrhj"; depends=[]; };
   mcemGLM = derive2 { name="mcemGLM"; version="1.1"; sha256="07ky3bvcns24qia9pyvf5lp7764h8gn2g8zr304iz4x9bq6jvsi0"; depends=[Rcpp RcppArmadillo trust]; };
   mcga = derive2 { name="mcga"; version="3.0.1"; sha256="0q0nn881lii8wfw28k8jh9z0kbi5ljcwi2wpq460k2w3agsjzw5n"; depends=[GA Rcpp]; };
-  mcgfa = derive2 { name="mcgfa"; version="1.0.0"; sha256="19q6lmrmbl3sh844n7mnl1r01bs8kgf0gghy4p4xmba1la0cb67k"; depends=[pgmm]; };
   mcgibbsit = derive2 { name="mcgibbsit"; version="1.1.0"; sha256="09ydcbjz3abmh46966v01dh26fy79dfklk3zjf262zp3c62ld9yf"; depends=[coda]; };
   mcglm = derive2 { name="mcglm"; version="0.3.0"; sha256="1q2zc0xn4inp9inadb52yc0svbh581qxxjzc08pgrm9l3xms4a14"; depends=[assertthat Matrix]; };
   mcheatmaps = derive2 { name="mcheatmaps"; version="1.0.0"; sha256="1gglm32xpmim38m7fziczgqfbpcq2899lxardsrzg6j1vhmf765y"; depends=[gridBase]; };
@@ -7906,17 +8069,17 @@ in with self; {
   mded = derive2 { name="mded"; version="0.1-2"; sha256="1j8fcz5yc70p9qd9l010xj1b625scdps8z1pqh75b45p2hiqbhlc"; depends=[]; };
   mdftracks = derive2 { name="mdftracks"; version="0.2.0"; sha256="0l8dc6ljrhbm8jwadaa3xkf6nx90vyiig15p7rryswczz9hw5ga6"; depends=[hellno]; };
   mdhglm = derive2 { name="mdhglm"; version="1.6"; sha256="1lvckais4c3pbf6zrpfkdlyqhcg4jaw11n00622h9ks413fl788v"; depends=[boot Matrix mvtnorm numDeriv]; };
-  mdmb = derive2 { name="mdmb"; version="0.4-15"; sha256="0qm5nyag19in8mpck1gvmsxmpj9dzfsnryx4gbwrss4yaapn7gmx"; depends=[CDM coda miceadds sirt TAM]; };
+  mdmb = derive2 { name="mdmb"; version="0.6-17"; sha256="1ydvfjqid7bsgryr8j77ajmh2q40s3gh67n8027f70pa8amr9fnq"; depends=[CDM coda MASS miceadds sirt TAM]; };
   mdpeer = derive2 { name="mdpeer"; version="1.0.1"; sha256="1vsqhah8h47s8k687fwa352549mdz16mwk1g7rcmhx75c2k85w2q"; depends=[boot ggplot2 glmnet magic nlme nloptr psych reshape2 rootSolve]; };
-  mdsOpt = derive2 { name="mdsOpt"; version="0.1-4"; sha256="1nbs2dxwh78kh2qp19whk6infckxrkckyxjlmcmcfmk578ivb5xb"; depends=[clusterSim smacof]; };
+  mdsOpt = derive2 { name="mdsOpt"; version="0.2-2"; sha256="1wg0f2a3z5pdiw8lljfrifn7lf00rza8rmrdh61dmna2nkrg9j4g"; depends=[clusterSim smacof symbolicDA]; };
   mdscore = derive2 { name="mdscore"; version="0.1-3"; sha256="10cl5r6kd9chdik5v0q91x40xpw2cjvvyi220z4bvngpb0989x8j"; depends=[MASS]; };
   mdsdt = derive2 { name="mdsdt"; version="1.2"; sha256="0nbzc54jac4wmfyrs821ycxh749cb1zfxcws0nbpk35rydqkc627"; depends=[ellipse mnormt polycor]; };
-  mdsr = derive2 { name="mdsr"; version="0.1.4"; sha256="1g9a6g8rf2svndis7569bnbj3jx1mgli172fjzdypfnhiyhd46vb"; depends=[babynames DBI dbplyr downloader dplyr ggplot2 mosaic RMySQL tidyverse]; };
-  mdw = derive2 { name="mdw"; version="2017.8-27"; sha256="0rsp6s15fgb7rni2qhgjx6dz1byvbaan5zhi6ixskpfs3z6h8fv8"; depends=[]; };
-  meaRtools = derive2 { name="meaRtools"; version="1.0.1"; sha256="1sgb1wnwf9kazzk35qk0zdw432qq535cwb2bhd4s5x2h1qqia53x"; depends=[emdist ggplot2 gridExtra gtools lattice plyr Rcpp reshape2]; };
+  mdsr = derive2 { name="mdsr"; version="0.1.5"; sha256="0b80l478v68w91vsmvvyvnmk0yasybmm013psy4181lhvxc93kma"; depends=[babynames DBI dbplyr downloader dplyr ggplot2 mosaic RMySQL tidyverse]; };
+  mdw = derive2 { name="mdw"; version="2017.12-03"; sha256="054vssnypbik0yf6smicggnkrqf6kx8k21nbf5rminsh00sx39k1"; depends=[]; };
+  meaRtools = derive2 { name="meaRtools"; version="1.0.2"; sha256="1xxw0aq4k5z4i3ndja1rxl9calb8hmp4jv9l79zm33vdlggpkxzg"; depends=[emdist ggplot2 gridExtra gtools lattice plyr Rcpp reshape2]; };
   meanShiftR = derive2 { name="meanShiftR"; version="0.51"; sha256="0qcciayriygfwkb15n863amcpcfl97fr1sarwm3d269idf5m7w6x"; depends=[]; };
   meanr = derive2 { name="meanr"; version="0.1-1"; sha256="080x21jnbsl6qlrgv12p9qd332ciph3lh18fgs9jagfyygf4f9hg"; depends=[]; };
-  measuRing = derive2 { name="measuRing"; version="0.4"; sha256="165j3i5295hxzqg8l2hrd61a0fh9xmw61dpx8js8qjz1zi9rm84x"; depends=[dplR pastecs png tiff]; };
+  measuRing = derive2 { name="measuRing"; version="0.4.2"; sha256="07asz2kninbmj9vci2w20a7cfbwfa1srvmb2dlzccdivjmrd5wnq"; depends=[dplR pastecs png tiff]; };
   measurements = derive2 { name="measurements"; version="1.1.0"; sha256="1zi6mpwyxycbphq48s7vfc8gm76nidpa2gafp0jxiv56rwpv3jc3"; depends=[]; };
   meboot = derive2 { name="meboot"; version="1.4-7"; sha256="1i0h71aj49hyj889447s611gz668ys7xlr1i82b5nvaf6chfbfin"; depends=[dynlm nlme]; };
   mederrRank = derive2 { name="mederrRank"; version="0.0.8"; sha256="1fvvik3bhjm6c0mhi2ma915986k2nj3lr2839k5hfrr7dg3lw3f4"; depends=[BB numDeriv]; };
@@ -7929,35 +8092,36 @@ in with self; {
   mefa = derive2 { name="mefa"; version="3.2-7"; sha256="1qrf6d3y38q7yy6bg3bxg7514d9paz1f8y6sr7lbksi30qn92fmj"; depends=[]; };
   mefa4 = derive2 { name="mefa4"; version="0.3-4"; sha256="11zg30i2fkxdv8fn7jilbmm7k5g0ls8f91bpq6qiwiagwg8gj2lh"; depends=[Matrix pbapply]; };
   meifly = derive2 { name="meifly"; version="0.3"; sha256="1x3lhy7fmasss0rq60z5qp74ni32sahw62s8cnp2j431sp95pczc"; depends=[leaps MASS plyr]; };
+  mekko = derive2 { name="mekko"; version="0.1.0"; sha256="09y50k4r4mnx351a5zhkqg9s2xyl3d149dhmfy2z6hzm5yg2ajyi"; depends=[ggplot2]; };
   meltt = derive2 { name="meltt"; version="0.3.3"; sha256="08qifdpk0c9digpayw1d9h2p9q4nyrlihg8kjqacirb5wh39wr6r"; depends=[ggmap ggplot2 plotGoogleMaps plyr reticulate scales sp]; };
   melviewr = derive2 { name="melviewr"; version="0.0.1"; sha256="19syc3d6zc0hmcjjdj7ibrdqxcdlh95ny970f3ska453qh1898b2"; depends=[cairoDevice gtools gWidgets gWidgetsRGtk2 jsonlite RColorBrewer RGtk2 RNifti]; };
   mem = derive2 { name="mem"; version="2.11"; sha256="1m0s587flc0psafm1fp1dsi7g4l03plhyzx2x74axihzyh2b5dbb"; depends=[boot mixtools RColorBrewer reshape2 sm stringr]; };
-  memapp = derive2 { name="memapp"; version="2.6"; sha256="018dqlpkjvsydys7gj3b7chp9bjpkp8rwjzd9jdmmihc2v2pjl2v"; depends=[DT formattable ggplot2 ggthemes mem openxlsx plotly RColorBrewer readxl reshape2 RODBC shiny shinyBS shinydashboard shinyjs shinythemes stringi stringr]; };
-  meme = derive2 { name="meme"; version="0.0.7"; sha256="0pdz2hjailgqirg38p5l49n07mq9nwx9rrd9yfp0pq3w5mzkjlgj"; depends=[ggplot2 magick]; };
-  memery = derive2 { name="memery"; version="0.3.1"; sha256="0i1c1lc22mh6g0manh1q2qcxmaa3binpc0ahlh69cdkl067b102z"; depends=[Cairo cowplot ggplot2 jpeg magrittr png purrr showtext sysfonts]; };
+  memapp = derive2 { name="memapp"; version="2.7"; sha256="14njpab2bsrpzpdhf45ckjq6fpscwr27xixw151m670wr8r01a6w"; depends=[dplyr DT formattable ggplot2 ggthemes magrittr mem openxlsx plotly RColorBrewer readxl RODBC shiny shinyBS shinydashboard shinyjs shinythemes stringi stringr tidyr]; };
+  meme = derive2 { name="meme"; version="0.1.1"; sha256="102z3zgfldggcykb7wlmw0wbdas6jbpvy2kfdps0wky3j552ir95"; depends=[ggplot2 magick showtext sysfonts]; };
+  memery = derive2 { name="memery"; version="0.4.2"; sha256="0wfp3hf567a1q6mhrsgn4hr8x52yp4na8783f2d19hm0c3r4z51q"; depends=[Cairo colourpicker cowplot ggplot2 jpeg magrittr png purrr shiny shinyBS shinycssloaders showtext sysfonts]; };
   memgene = derive2 { name="memgene"; version="1.0"; sha256="00b1mi2hvzzps542mh2p96s27kjqkpcic7djklfcwnfn1m4bz0i5"; depends=[ade4 gdistance raster vegan]; };
-  memisc = derive2 { name="memisc"; version="0.99.14.5"; sha256="10x6fi88nil8q7bx5g34vafwl3k0gj451lg1rkgljx9dvvxzv6cd"; depends=[lattice MASS repr]; };
-  memo = derive2 { name="memo"; version="1.0"; sha256="1pqlsn79gpm0d5bxnjg1c1gjaqdrdvcjvr84zpfk6nmsb2862w48"; depends=[digest]; };
+  memisc = derive2 { name="memisc"; version="0.99.14.9"; sha256="1gh6shm9nwfjwfi5f4cz2jsldfdnkj6f73279l86wki5gdf36zri"; depends=[lattice MASS repr]; };
+  memo = derive2 { name="memo"; version="1.0.1"; sha256="14nvqi1qsin45ksd0wp9cigjk1gghr4jijdqkaqh177dwa244r9j"; depends=[digest]; };
   memoise = derive2 { name="memoise"; version="1.1.0"; sha256="034qfc2xlh30x1q2vya239w34a3ir3y2fwnx2agbgbi6592zjxmj"; depends=[digest]; };
   memuse = derive2 { name="memuse"; version="4.0-0"; sha256="1g63nssxrgqgzw8qjz8202qpwhps8fbck6pn77j2wsc82dm73y7v"; depends=[]; };
-  merDeriv = derive2 { name="merDeriv"; version="0.1-2"; sha256="05z0lkhmxbw82sy3qlyyb58fwbillx296ay3sskbz1clj0plph82"; depends=[lme4 Matrix nonnest2 sandwich]; };
+  merDeriv = derive2 { name="merDeriv"; version="0.1-3"; sha256="0kgmv220nlg0r31bwg5qxkc8ybngg4c5q16bkknzf4khmbx19iwm"; depends=[lme4 Matrix nonnest2 sandwich]; };
   merTools = derive2 { name="merTools"; version="0.3.0"; sha256="1kc32zm1wmmivf1qfs6vi7y8kwibj6sr540is82dyh7xdmbc5mx3"; depends=[abind arm blme broom dplyr DT ggplot2 lme4 mvtnorm shiny]; };
   merror = derive2 { name="merror"; version="2.0.2"; sha256="13d9r5r83zai8jnzxaz1ak40876aw20zbpr244gs55rvj5j7f87q"; depends=[]; };
   meshsimp = derive2 { name="meshsimp"; version="0.1.1"; sha256="0cdgq4vfjf0h6l55v687k5xs0nwmlpqmw424xgnsfnwxw5ljcvb1"; depends=[plot3D Rcpp RcppEigen]; };
   metRology = derive2 { name="metRology"; version="0.9-26-2"; sha256="1i9lxgphn8nmkcp2zgjs6ylbccmfgv9lfch00xmx1xfb538jz82q"; depends=[MASS numDeriv robustbase]; };
   metScanR = derive2 { name="metScanR"; version="1.1.1"; sha256="0cl3vfh8hcx230xpv5611liwk7jr49a2akz18f641yd04akk7f19"; depends=[geosphere leaflet plyr RColorBrewer RCurl]; };
-  meta = derive2 { name="meta"; version="4.8-4"; sha256="0s2f1n404gfjf4k1h7x3jcys56x83y35zir7gyc32ydn88zfn57z"; depends=[]; };
-  meta4diag = derive2 { name="meta4diag"; version="2.0.6"; sha256="088gxx559ikw11iiyjvgszf5i2q9hh7q439774ccxsqirkb45gcv"; depends=[caTools shiny shinyBS sp]; };
+  meta = derive2 { name="meta"; version="4.9-0"; sha256="012yhxbn114q8bf75mm8ap11q33a5azzkh1b811saq77p1f6lwgq"; depends=[]; };
+  meta4diag = derive2 { name="meta4diag"; version="2.0.7"; sha256="024rxnqzw9xydy0mm1w38s739qgkzjsifq23bwpvkwj0x0jnwry0"; depends=[caTools shiny shinyBS sp]; };
   metaBMA = derive2 { name="metaBMA"; version="0.3.9"; sha256="14c3q4aw89r3apzm0ils886xsc6agbn8d2wgp47dc2ddwf5n8p58"; depends=[coda LaplacesDemon logspline mvtnorm runjags]; };
   metaLik = derive2 { name="metaLik"; version="0.42.0"; sha256="1rk5mwgmgnqq2hrzbh936hzw3aa815l12r1a1qywap5ggmmyhszl"; depends=[]; };
   metaMA = derive2 { name="metaMA"; version="3.1.2"; sha256="1mjyz06q1kc8lhfixpym4ndpnisi1r849fj3da6riwfd6ab1v181"; depends=[limma SMVar]; };
   metaMix = derive2 { name="metaMix"; version="0.2"; sha256="0xlsdgincxwjzyr4i8qfmfw2wvgf41qbmyhf2rxcbarf7rmwhmqf"; depends=[data_table ggplot2 gtools Matrix Rmpi]; };
   metaRNASeq = derive2 { name="metaRNASeq"; version="1.0.2"; sha256="1xz7df7ypq4326yg429pgxd6aldp14c3h3qi20j5nqr5xgsdgzqa"; depends=[]; };
-  metaSEM = derive2 { name="metaSEM"; version="0.9.16"; sha256="00zfm3r0vs7zhz9qi19jhjm7qbpysbs2sdnlqsj4ml9kc0j2czns"; depends=[ellipse MASS Matrix mvtnorm OpenMx]; };
+  metaSEM = derive2 { name="metaSEM"; version="1.0.0"; sha256="1i77w7b6xbi8p43s9vicj121kz7f3qp1zhqwy6qc5xcj9qaqjklp"; depends=[ellipse lavaan MASS Matrix mvtnorm numDeriv OpenMx]; };
   metabolomics = derive2 { name="metabolomics"; version="0.1.4"; sha256="0m5d2784mkpkkg396y3vpvf38vmba5kvxarilq3zf818vjs4pnax"; depends=[crmn gplots limma]; };
   metacart = derive2 { name="metacart"; version="1.0-0"; sha256="13dp9yz6yjd2jc7lf3w3ac3vk69ry7zygf6xnvzrcwsdmxd0258n"; depends=[ggplot2 gridExtra rpart rpart_plot]; };
-  metacoder = derive2 { name="metacoder"; version="0.1.3"; sha256="1kbxv4gvpq33vg0ri9mqkaqxlqhnccycha30dv48n4m4f3s7h8ad"; depends=[ape dplyr ggplot2 igraph lazyeval magrittr RColorBrewer RCurl readr reshape reshape2 scales seqinr stringr taxize traits zoo]; };
-  metacom = derive2 { name="metacom"; version="1.4.9"; sha256="1l3agymxz3qlrk0kzwlkqhalyw5ylsl6l0an8xcljgclymrb27j0"; depends=[vegan]; };
+  metacoder = derive2 { name="metacoder"; version="0.2.0"; sha256="0dyd16yy7adpyksfpg6d414s1l6nls5hv1k938mn7fji1px14sgj"; depends=[ape biomformat cowplot dplyr GA ggfittext ggplot2 ggrepel igraph lazyeval magrittr phylotate RColorBrewer Rcpp RCurl readr reshape reshape2 rlang scales seqinr stringr taxa taxize traits vegan zoo]; };
+  metacom = derive2 { name="metacom"; version="1.5.0"; sha256="1zsnzzxv3vsj1swybhh6g8ddffp4xrn081y192xa6a78ii8q4kav"; depends=[vegan]; };
   metacor = derive2 { name="metacor"; version="1.0-2"; sha256="04k3ph0yg3jp8x4g6l1h4m0qwl51mx0626xmm0fzr1pv4b4a1ypw"; depends=[gsl rmeta]; };
   metafolio = derive2 { name="metafolio"; version="0.1.0"; sha256="18s78lljwnn3j0l3mqc0svszcb3c8yzyzlpnimndbiq9yxagxnnf"; depends=[colorspace MASS plyr Rcpp RcppArmadillo]; };
   metafor = derive2 { name="metafor"; version="2.0-0"; sha256="0h14wd7hr1d40p5r70f2jgdgj24jwpnr4nrj6yp5qjr466v81z96"; depends=[Matrix nlme]; };
@@ -7967,13 +8131,13 @@ in with self; {
   metagen = derive2 { name="metagen"; version="1.0"; sha256="0jvbm22976aqvmfnjzs51n2w099yj5hpx6hd0pgvbia80jk7b9vk"; depends=[BatchExperiments BatchJobs BBmisc ggplot2 lhs MASS metafor ParamHelpers plyr]; };
   metaheur = derive2 { name="metaheur"; version="0.2.0"; sha256="1rr5mjx3v87alj7cl9hxldvhhbpkz1fzmymmkqv0hs65pny6gbqw"; depends=[doParallel foreach ggplot2 preprocomb reshape2]; };
   metaheuristicOpt = derive2 { name="metaheuristicOpt"; version="1.0.0"; sha256="1wzy5dnmrdfdj1386snjyisrbzbq8v4qsnq57l3wvkg1pgnz1vh2"; depends=[]; };
-  metamisc = derive2 { name="metamisc"; version="0.1.7"; sha256="1fwv3vkcwkk3mm5jmsgwpvd1r92qfjbybhvzm4jxxyy66gh9xzax"; depends=[ellipse ggplot2 lme4 metafor mvtnorm plyr]; };
+  metamisc = derive2 { name="metamisc"; version="0.1.8"; sha256="06dzjnrbxqkb0d0zcdxg8fyadsbq0f0fca4xifjz16yjz1047n5k"; depends=[ellipse ggplot2 lme4 metafor mvtnorm plyr]; };
   metansue = derive2 { name="metansue"; version="2.0"; sha256="102cddahlzm0b76y6pr7jxqxf28j6y3hsjd17fpnyvrwnzhqbz5m"; depends=[]; };
   metap = derive2 { name="metap"; version="0.8"; sha256="06ny9zkilawdy0s8yiwhnygs3yppw89bbyf76zgdavykbzscz5lh"; depends=[lattice]; };
-  metaplot = derive2 { name="metaplot"; version="0.2.1"; sha256="0d1h5p5nn5hc897zwxg7zzj45hl8n7pi8ax149blg3kpc2nxasvg"; depends=[dplyr encode fold ggplot2 lattice lazyeval magrittr rlang]; };
+  metaplot = derive2 { name="metaplot"; version="0.4.1"; sha256="1spi3zrrysdxrq355rzqrvdai8hkx1dbaryxx4bdn6f2nn7p3nd2"; depends=[dplyr encode lattice magrittr rlang tidyr]; };
   metaplotr = derive2 { name="metaplotr"; version="0.0.3"; sha256="01iala6cxsxv30fnlh80md5mpy3ksd2piw90zcls8f68g1c6v1jy"; depends=[ggplot2 gridExtra]; };
   metaplus = derive2 { name="metaplus"; version="0.7-9"; sha256="1hrczccszx9jcgifwg6wsigsbm8ih4xjr00knb0rxyygijk38c82"; depends=[bbmle boot fastGHQuad lme4 MASS metafor numDeriv]; };
-  metasens = derive2 { name="metasens"; version="0.3-1"; sha256="0nxvllfa2x6v2hpgind5xr0i40wi7cpdd18lwgy9s4jpgbn0n17p"; depends=[meta]; };
+  metasens = derive2 { name="metasens"; version="0.3-2"; sha256="1wxp6gzq3wmas8hm8vqxclawxkc4p8dw2apzmg0nciqvas6dzic8"; depends=[meta]; };
   metatest = derive2 { name="metatest"; version="1.0-4"; sha256="0bz6gg2n4ffkr144jxk27y24xpqhp8awr09wkaijmv8902qx6qah"; depends=[]; };
   metavcov = derive2 { name="metavcov"; version="1.1"; sha256="1x87knvypkfg0x223aiak7fy7zdlfn74crmvnqzhxf2vmxljnvnh"; depends=[corpcor]; };
   metaviz = derive2 { name="metaviz"; version="0.1.1"; sha256="1myhh16a7mad4gidl2xhnfv940gjqhbl8rlg6vrwvawgaiwigbxp"; depends=[ggplot2 metafor nullabor plyr RColorBrewer]; };
@@ -7984,20 +8148,22 @@ in with self; {
   meteoland = derive2 { name="meteoland"; version="0.6.7"; sha256="0b3hf25dxiaxjj6v9wprysbvr2m6f3vlldy77civq5fkkibx9pzi"; depends=[curl ncdf4 ncdf4_helpers qmap Rcpp rgdal sp spdep]; };
   metricTester = derive2 { name="metricTester"; version="1.3.4"; sha256="1z4z8km1jr0azh2zxp1sffm5picc9y6w9yn68zr1axli0l64y3a0"; depends=[ape doParallel dplyr foreach geiger MASS picante plotrix spacodiR]; };
   metricsgraphics = derive2 { name="metricsgraphics"; version="0.9.0"; sha256="1zbx82b34y0rr4w7rzvyc1nzk95w6cdkg0j1kkshbmkvplq6v9i4"; depends=[htmltools htmlwidgets magrittr]; };
-  mets = derive2 { name="mets"; version="1.2.2"; sha256="1rdljq4069n7i05sqi75bcp1zpq69m13vf1nrjfg568cpwmr4m37"; depends=[lava numDeriv Rcpp RcppArmadillo survival timereg]; };
+  mets = derive2 { name="mets"; version="1.2.3"; sha256="1f1mqpzpvh5vb8b8w72q13jhk978bcvwipf4bx3kzzgsf6yfxk5s"; depends=[lava numDeriv Rcpp RcppArmadillo survival timereg]; };
   mev = derive2 { name="mev"; version="1.10"; sha256="0kidgghwjc81rx2vb8y1iiwvlfxafv7r11n3zz1gb7705w6ynw1m"; depends=[boot evd gmm ismev nleqslv numDeriv Rcpp RcppArmadillo rootSolve]; };
   mewAvg = derive2 { name="mewAvg"; version="0.3.0"; sha256="16gc78ccjffp9qgc7rs622jql54ij83ygvph3hz19wpk22m96glm"; depends=[]; };
-  mexhaz = derive2 { name="mexhaz"; version="1.3"; sha256="1sqys7k6hrs892b50cn54q2k3vnlmgz1467rdwaksailhhizpbc5"; depends=[MASS numDeriv statmod survival]; };
+  mexhaz = derive2 { name="mexhaz"; version="1.4"; sha256="1c3n8g93pb38dw45ls6wh81giqw7zkksh2rmpbw46ink23ks12ij"; depends=[MASS numDeriv statmod survival]; };
+  mfGARCH = derive2 { name="mfGARCH"; version="0.1.2"; sha256="08gkba5v8l0867rrxakn7js11v1yj7qp9vmzbjmri9hjcm02s44a"; depends=[numDeriv Rcpp zoo]; };
   mfe = derive2 { name="mfe"; version="0.1.0"; sha256="06x6csf3pr1vdmmimg6f7iffrivj8wcdfafvld7nrzbkl09cbfbn"; depends=[C50 class e1071 infotheo MASS rpart]; };
   mfp = derive2 { name="mfp"; version="1.5.2"; sha256="1i90ggbyk2p1ym7xvbf4rhyl51kmfp6ibc1dnmphgw15wy56y97a"; depends=[survival]; };
   mfx = derive2 { name="mfx"; version="1.1"; sha256="1zhpk38k7vdq0pyqi1s858ns19qycs3nznpa00yv8sz9n798wnn5"; depends=[betareg lmtest MASS sandwich]; };
   mgarchBEKK = derive2 { name="mgarchBEKK"; version="0.0.2"; sha256="1k4c34srnckbh5kchzmm44l91ma9sw0gi4y225igs3cl79212q9c"; depends=[mvtnorm tseries]; };
-  mgcv = derive2 { name="mgcv"; version="1.8-22"; sha256="1546p6aflg3z6xl2mns1n2c3j8q2spr9cjggj9rn33vrrhsv4fss"; depends=[Matrix nlme]; };
+  mgcv = derive2 { name="mgcv"; version="1.8-23"; sha256="1lsrhf1yzn25pfn3f5x8yxjqnfryim4jx3iqd7ah8aalh5asqwbp"; depends=[Matrix nlme]; };
   mglR = derive2 { name="mglR"; version="0.1.0"; sha256="1b7nd913d4a1szgw2qnhlnjqhfxr95xag6jwjcb2wnnxd12lib7n"; depends=[biomaRt dplyr gdata ggplot2 gplots magrittr stringr]; };
   mglmn = derive2 { name="mglmn"; version="0.0.2"; sha256="1ijkmr85s4yya0hfwcyqqskbprnkcbq8sc9c889i0gy0543fgqz4"; depends=[mvabund snowfall]; };
   mgm = derive2 { name="mgm"; version="1.2-2"; sha256="0n0db6np7i0lycvis9pc1bsnzam4nrr9qzlwimz7d8pp7gm313xn"; depends=[glmnet Hmisc matrixcalc stringr]; };
   mgpd = derive2 { name="mgpd"; version="1.99"; sha256="0cxpgza9i0hjm5w1i5crzlgh740v143120zwjn95cav8pk8n2wyb"; depends=[corpcor evd fields numDeriv]; };
   mgraph = derive2 { name="mgraph"; version="1.03"; sha256="0av2c0jvqsdfb3i0s0498wcms0n2mm0z3nnl98mx2fy7wz34z8b2"; depends=[rgdal]; };
+  mgsub = derive2 { name="mgsub"; version="1.0.0"; sha256="0aj00ch96kii1r053yqi8g44i64jdyigqnrzrwm6xsf1l2ms3v59"; depends=[]; };
   mhde = derive2 { name="mhde"; version="1.0-1"; sha256="1q7lbj2is024f5rmfpdn3a0hsb78bf62ddal3chhnh3bi1z3jrjk"; depends=[]; };
   mhsmm = derive2 { name="mhsmm"; version="0.4.16"; sha256="009dj0zkj1zry7jr9hf4cknb686z50a2l967if64xm0dvjmp7dgs"; depends=[mvtnorm]; };
   mht = derive2 { name="mht"; version="3.1.2"; sha256="01zcaf9k0qayzm8dn5dvnm5n3qgqpj8r96qhqaa5vbjcr6ci2x2r"; depends=[glmnet Matrix]; };
@@ -8006,7 +8172,7 @@ in with self; {
   mi = derive2 { name="mi"; version="1.0"; sha256="1h47k5mpbvhid83277dvvj2di493bgzz9iarpyv3r30y219l7x1l"; depends=[arm Matrix]; };
   miCoPTCM = derive2 { name="miCoPTCM"; version="1.0"; sha256="1lmf6zahfp59ylhdp2cbr7y3vayhim72zazimg4qfld4r9d6kygc"; depends=[distr MASS nleqslv survival]; };
   miLineage = derive2 { name="miLineage"; version="2.0"; sha256="091wf4kwakdr91xkyg038f0vj941gvziy7yc4l8cylcjbr647qzz"; depends=[data_table geepack MASS]; };
-  miRNAss = derive2 { name="miRNAss"; version="1.3"; sha256="12m55dv4kh0k8yvbr4qyj9z66i82z8d7ga4g89dfiwg09ydkdazf"; depends=[CORElearn Matrix Rcpp RSpectra]; };
+  miRNAss = derive2 { name="miRNAss"; version="1.4"; sha256="0p852vyn44g84i4hzm7b02m5cxyqajnczx0s9x9373rn7fi6r98c"; depends=[CORElearn Matrix Rcpp RSpectra]; };
   miRada = derive2 { name="miRada"; version="1.13.8-8"; sha256="1m6rm65pv4r16r0s5ih69nr3v2rnpsvpdpk07pi7k4f7v9wck71v"; depends=[]; };
   miRtest = derive2 { name="miRtest"; version="1.8"; sha256="0i66s1sz7vf8p8ihfrxmag7wbkw8mlkldcp1w2figlzyhs74c85p"; depends=[corpcor GlobalAncova globaltest limma MASS RepeatedHighDim]; };
   micEcon = derive2 { name="micEcon"; version="0.6-14"; sha256="1d3cdg36ighyhly5by9gl6lxkdvx2agb5cv2mf77pwwd7rpq35h3"; depends=[miscTools plm]; };
@@ -8015,40 +8181,41 @@ in with self; {
   micEconIndex = derive2 { name="micEconIndex"; version="0.1-6"; sha256="1ihly6qpyg1pms4nkvs6khxxqwr3fwg57i8pg0yhyy1apqxyj2xl"; depends=[miscTools]; };
   micEconSNQP = derive2 { name="micEconSNQP"; version="0.6-6"; sha256="1n3pxapc90iz1w3plaqflayd0b1jqd65yw5nbbm9xz0ih132dby9"; depends=[MASS miscTools systemfit]; };
   mice = derive2 { name="mice"; version="2.46.0"; sha256="1gjvlk67zvgipfczsca8zqk97vg3sivv82hblsdwp14s7smhjcax"; depends=[lattice MASS nnet Rcpp rpart survival]; };
-  miceadds = derive2 { name="miceadds"; version="2.8-24"; sha256="0p6kfzf3c1cr4hr8azyy239wgkhclfiq2mxi7sfyvj713npbyin5"; depends=[CDM lme4 mice mitools mvtnorm Rcpp RcppArmadillo sirt TAM]; };
-  micemd = derive2 { name="micemd"; version="1.1.0"; sha256="0y452xsrxdcb3kahya1f969lrf9lq9cv7zxsdf329x3q563lrcsm"; depends=[abind digest jomo lme4 MASS Matrix mice mvmeta mvtnorm nlme]; };
+  miceExt = derive2 { name="miceExt"; version="1.0.0"; sha256="0rfmnrm04ir16zjbf6pfg25yxnyn5k47yiixp2k0vs86j1sf25v1"; depends=[mice RANN RANN_L1]; };
+  miceadds = derive2 { name="miceadds"; version="2.9-15"; sha256="03jvs643cq23y5fj1ffilqr9bi7g4blk7c0bh7nvrpjx5sscqjck"; depends=[CDM lme4 MASS mice mitools mvtnorm Rcpp RcppArmadillo sirt TAM]; };
+  micemd = derive2 { name="micemd"; version="1.2.0"; sha256="0l4qzhkxy43xwgfqp2c638fimixdrm94hgiabfds3sc1vbxma4r8"; depends=[abind digest jomo lme4 MASS Matrix mice mvmeta mvtnorm nlme]; };
   micompr = derive2 { name="micompr"; version="1.0.2"; sha256="1hmxi5wz7vfnvawh50zk316gr3ry59m820ddj2v9p7cxq21hwv9i"; depends=[]; };
   microPop = derive2 { name="microPop"; version="1.3"; sha256="072qldi020m84j9crfvzvw2nzn5fagqmjjzb7g7i70zwqhl1kjsa"; depends=[deSolve]; };
   microbats = derive2 { name="microbats"; version="0.1-1"; sha256="1mahvblaiwg1xk2s34wd1ic8ddc9lh6g0azik2pd97bsf0krkyw8"; depends=[]; };
-  microbenchmark = derive2 { name="microbenchmark"; version="1.4-2.1"; sha256="0qn5r1a6qidghcisc2hpbdmj62pnixc3zz6p4ipk8mvakf0hdsvg"; depends=[ggplot2]; };
+  microbenchmark = derive2 { name="microbenchmark"; version="1.4-4"; sha256="0fv2w2vsiz18imf4115nd9chhmf275w2mb49pn7pkxi6z3bamc9c"; depends=[]; };
   microclass = derive2 { name="microclass"; version="1.1"; sha256="0hl2s4135k187f0vqmj9snvmnwa5k9fg8ahivfs7ciknrcxfv3nk"; depends=[microcontax microseq Rcpp RcppEigen RcppParallel]; };
   microcontax = derive2 { name="microcontax"; version="1.0"; sha256="0l5mfgda5xagjbh9bwv328k3m7kgggdm90rc8fr1ic59hvg56f3g"; depends=[microseq]; };
-  microdemic = derive2 { name="microdemic"; version="0.1.0"; sha256="0sywdgxldmlin3bdns8549xlngn6qm6rql2avb2m5z7w4q7ql4d5"; depends=[crul data_table jsonlite tibble]; };
-  micromap = derive2 { name="micromap"; version="1.9.2"; sha256="1x4v0ibbpfz471dp46agib27i4svs8wyy93ldriryvhpa2w5948y"; depends=[ggplot2 maptools RColorBrewer rgdal sp]; };
+  microdemic = derive2 { name="microdemic"; version="0.2.0"; sha256="0g39j9bdfcv90332g9mp7khn15vqs0fzqx38criw4rxwi8dcd307"; depends=[crul data_table jsonlite tibble]; };
+  micromap = derive2 { name="micromap"; version="1.9.3"; sha256="1iciwy0kcg4qa0xc4gkqcilq33ac1s184vw13cbbkv0d1b5cgkgv"; depends=[ggplot2 maptools RColorBrewer rgdal sp]; };
   micromapST = derive2 { name="micromapST"; version="1.1.1"; sha256="15ch132x3wnpf7rmy25nah7iyfxfk90p7lvavqjhrnavhjsfxbxx"; depends=[labeling RColorBrewer stringr]; };
-  micropan = derive2 { name="micropan"; version="1.1.2"; sha256="0rvaampr5vlpz253lhy330380646g2vqj1hqp6gsk0gp0hdlkd7g"; depends=[igraph microseq]; };
-  microplot = derive2 { name="microplot"; version="1.0-16"; sha256="144rj86lkjkmwlqwlwmnagvlknhg0wg92kabpfpz2w0swfhfa742"; depends=[Hmisc]; };
-  microseq = derive2 { name="microseq"; version="1.2"; sha256="14w1fycw0jgrc5g0ygks9j28hy37li057qf097qnp18w05jk3hws"; depends=[Rcpp]; };
+  micropan = derive2 { name="micropan"; version="1.2"; sha256="1b3hd5c6l9njns372zhqfryibrpqmrjxmc1p5gzdwm7450cs7qky"; depends=[BH igraph microseq Rcpp]; };
+  microplot = derive2 { name="microplot"; version="1.0-25"; sha256="05b29l5s4g4yvprxsla28ykr4823lfhqlxm46p406p06r9wki3d7"; depends=[ggplot2 HH Hmisc htmltools lattice ReporteRs]; };
+  microseq = derive2 { name="microseq"; version="1.2.2"; sha256="1h828iviraqrm43lhd0s3r7rdlakc6yfc6ngrcrkacpflfcmx3c7"; depends=[Rcpp]; };
   midas = derive2 { name="midas"; version="1.0.1"; sha256="1alqxk23651jnkg0xn4rpvk71z5rhvx3y0wjrgkw2qw95s7jjn72"; depends=[shiny xml2]; };
   midasr = derive2 { name="midasr"; version="0.6"; sha256="1sg6m36jg3b6znfg97ln5a6b4z36xkyjvgxk7wmqdq3h528z8613"; depends=[forecast MASS Matrix numDeriv optimx sandwich]; };
   midastouch = derive2 { name="midastouch"; version="1.3"; sha256="1pjzcf0hjfhr5p0la8pz1njw7bhfrcrzpqfsdqk2z5c6dbh4awzq"; depends=[]; };
   midrangeMCP = derive2 { name="midrangeMCP"; version="1.3"; sha256="1733dlhzbgrjdzd88rh9dkqhxh05gr078sbmihab7whbrpsq8068"; depends=[SMR WriteXLS xtable]; };
-  migest = derive2 { name="migest"; version="1.7.3"; sha256="1g49b4fa2974w8alb97k06k3zi49q66n16cvcbqdaj9j21c9qfmy"; depends=[]; };
+  migest = derive2 { name="migest"; version="1.7.4"; sha256="0v47qnhk48dh1vvw0b9d4z1l7iv09h47b0vh9f3s3pryn076vn9q"; depends=[]; };
   migration_indices = derive2 { name="migration.indices"; version="0.3.0"; sha256="0h0yjcj70wzpgrv3wl1f2h2wangh1klsllq0i0935plgzw736mwd"; depends=[calibrate]; };
   migui = derive2 { name="migui"; version="1.1"; sha256="1qchjsc7ff2b6s9w6ncj9knjv6pyp90jd4jxljn2rr1ix1gc45za"; depends=[arm gWidgets2 mi]; };
-  miic = derive2 { name="miic"; version="1.0"; sha256="1jfj5m97bzbw8r128d14mp9kiavhxd8diazgh3qijxn52pyizln4"; depends=[bnlearn igraph MASS ppcor Rcpp]; };
+  miic = derive2 { name="miic"; version="1.0.3"; sha256="088szscn9v9279w86mypxphp3avv17iijvcvlckx3h1ka75lkx27"; depends=[bnlearn igraph MASS ppcor Rcpp]; };
   milr = derive2 { name="milr"; version="0.3.0"; sha256="0z4d22fd6gd3zbi973vws9jqyh4c4m4i4ajcpxv934vxmbj0cma9"; depends=[glmnet numDeriv pipeR Rcpp RcppArmadillo RcppParallel]; };
   mime = derive2 { name="mime"; version="0.5"; sha256="0i91m3ivaja1k33jwcvz16pfjypkci27awm8glil7sxhmwaj3izw"; depends=[]; };
   minPtest = derive2 { name="minPtest"; version="1.7"; sha256="088kckpbfy2yp0pk3zrixrimywrvkaib5ywa7fkr5phnzlsl80sv"; depends=[Epi scrime]; };
   mindr = derive2 { name="mindr"; version="1.1.0"; sha256="102r7m6jiadgmkw4w7535ba2qfxknj00y4b9hhawcjqm5v67jipz"; depends=[htmlwidgets]; };
   minerva = derive2 { name="minerva"; version="1.4.7"; sha256="19snlbnk4y0lj7kfypa2g1d1s7bl3xkrxabn8p15hlwwcfb0x7vm"; depends=[]; };
-  miniCRAN = derive2 { name="miniCRAN"; version="0.2.10"; sha256="1hry3w3p7gd8vih1lz7g41zd1p85bqr0397llwd9lj1cwibkhhgd"; depends=[httr igraph magrittr XML]; };
+  miniCRAN = derive2 { name="miniCRAN"; version="0.2.11"; sha256="1ffc367ipcxyk2a8f2y46xa01rbr5254cryf1qzzfflb3xj8n6pa"; depends=[httr igraph XML]; };
   miniGUI = derive2 { name="miniGUI"; version="0.8.0"; sha256="1iq52x7wbcin7ya207jj3k9vym7mavm5z61vggyabdmr768pci39"; depends=[]; };
   miniUI = derive2 { name="miniUI"; version="0.1.1"; sha256="1qfca55phw6614qh5ligvqawpyvpb08x7ky44sffwxgff4h074lw"; depends=[htmltools shiny]; };
   minimalRSD = derive2 { name="minimalRSD"; version="1.0.0"; sha256="1p1jpi8lnv952k4c1wjgbgpb0hv4zg0f9qrd43cx0caibkqvhzf7"; depends=[]; };
   minimap = derive2 { name="minimap"; version="0.1.0"; sha256="0y5yzic9pwpzs01gnl82syankijcjp85n22jn5zda0bp3y01r53r"; depends=[]; };
   minimax = derive2 { name="minimax"; version="1.0"; sha256="1g0d9q5h1avbb0yg7ajw5330820i3n5cgkpsif754l4j3ikya8p3"; depends=[]; };
-  minimaxdesign = derive2 { name="minimaxdesign"; version="0.1.2"; sha256="0sbycipns8nx63lp0426b9fwmlq3lprb9j3cfry7a1ibfkw63qf9"; depends=[DiceDesign doParallel doSNOW foreach gtools MaxPro nloptr randtoolbox Rcpp RcppArmadillo]; };
+  minimaxdesign = derive2 { name="minimaxdesign"; version="0.1.3"; sha256="0jxfvlsjd6bippjziplpgvpbnwd816dx2kf3gj32xmfwzminjx5f"; depends=[DiceDesign doParallel doSNOW foreach gtools jpeg MaxPro nloptr randtoolbox Rcpp RcppArmadillo]; };
   minimist = derive2 { name="minimist"; version="0.1"; sha256="007y829d766b1v6wkrhk7pkg99r38bvmhc8bwvs8rs13dr7444ln"; depends=[V8]; };
   minpack_lm = derive2 { name="minpack.lm"; version="1.2-1"; sha256="18ym2pdql5vzngc7q5gn66d153hrfrnd8ilv8yh6vd7j7sx7vjql"; depends=[]; };
   minqa = derive2 { name="minqa"; version="1.2.4"; sha256="036drja6xz7awja9iwb76x91415p26fb0jmg7y7v0p65m6j978fg"; depends=[Rcpp]; };
@@ -8056,10 +8223,10 @@ in with self; {
   minval = derive2 { name="minval"; version="0.8"; sha256="05yqr2b5x17kpp4661x6p4pjszmvz2bad43z8m3qnvaa29zhd3n3"; depends=[]; };
   minxent = derive2 { name="minxent"; version="0.01"; sha256="1a0kak4ff1mnpvc9arr3sihp4adialnxxyaacdgmwpw61wgcir7h"; depends=[]; };
   mipfp = derive2 { name="mipfp"; version="3.1"; sha256="18cfv8s38cd0g1wc5pry6a4m2ykqflkxhqbqnjbjvmr42bj3r6sp"; depends=[cmm numDeriv Rsolnp]; };
-  mirt = derive2 { name="mirt"; version="1.26.1"; sha256="11p8434kyr27vfacgscmmx0jgmb10sgzyhcjrjpr3md837xv56j2"; depends=[GPArotation lattice mgcv Rcpp RcppArmadillo vegan]; };
+  mirt = derive2 { name="mirt"; version="1.26.3"; sha256="1jzvxcq7s179vi5cwrxkcqzffl2pyay5abnvlgazhabzf4150sml"; depends=[GPArotation lattice mgcv Rcpp RcppArmadillo vegan]; };
   mirtCAT = derive2 { name="mirtCAT"; version="1.6.1"; sha256="00jy27ilv1fw9ijhcyyi2lnxghyjb0dhpcqf1dqc6wi61wf5pagk"; depends=[lattice lpSolve markdown mirt pbapply Rcpp RcppArmadillo shiny]; };
   misc3d = derive2 { name="misc3d"; version="0.8-4"; sha256="0qjzpw3h09qi2gfz52b7nhzd95p7yyxsd03fldc9wzzn6wi3vpkm"; depends=[]; };
-  miscF = derive2 { name="miscF"; version="0.1-3"; sha256="1djmsffwkicj25ndg07dnid6qj66b1rdw0yrv79jakjfbv71c13i"; depends=[BayesBridge BRugs MASS MCMCpack mvtnorm R2jags Rcpp RcppArmadillo]; };
+  miscF = derive2 { name="miscF"; version="0.1-4"; sha256="1kvkbvrmaqclwdfghkrsmnzb6xbi97icay2wwb7k5m34xhx4ha82"; depends=[MASS MCMCpack mvtnorm R2jags]; };
   miscFuncs = derive2 { name="miscFuncs"; version="1.2-10"; sha256="1kqya581n76ff9avhj6xm6nwsbw7zlm4mwy0vyvdlqlf7c381qq0"; depends=[mvtnorm roxygen2]; };
   miscTools = derive2 { name="miscTools"; version="0.6-22"; sha256="1sngkl5rwg1vp2xx9a5g2nz2nhwxwv7ni21ww7hyjc8x5mhb42yh"; depends=[]; };
   misclassGLM = derive2 { name="misclassGLM"; version="0.2.0"; sha256="1dz36q2gl0q8d0s2rxn28b8ykw31wcdxf91s7ypmjggfdj64i8br"; depends=[bigmemory foreach MASS Matrix mlogit numDeriv ucminf]; };
@@ -8071,7 +8238,7 @@ in with self; {
   missForest = derive2 { name="missForest"; version="1.4"; sha256="0y02dhrbcx10hfkakg5ysr3kpyrsh2d9i5b0qzhj9x5x0d5q11gp"; depends=[foreach itertools randomForest]; };
   missMDA = derive2 { name="missMDA"; version="1.11"; sha256="185ia5zg5gdrkjpj5sql46lz5svw77wjy9zplpqhrmgx43fv0w0i"; depends=[FactoMineR mice mvtnorm]; };
   missRanger = derive2 { name="missRanger"; version="1.0.0"; sha256="0advj6a57pj79xn43gxp7ll4b3y7hl5cvz5d7hw69f4yk4blwkjr"; depends=[FNN ranger]; };
-  mistat = derive2 { name="mistat"; version="1.0-4"; sha256="0gzng0kl3handy3k7g62c4sdcf9l6x0b69jxmfrwfd4297f57n9n"; depends=[]; };
+  mistat = derive2 { name="mistat"; version="1.0-5"; sha256="1vyx918b7iv1wcnk23bnlxljwy0hglpdx5drhrs5qcd45f6jrghc"; depends=[]; };
   mistral = derive2 { name="mistral"; version="2.1.0"; sha256="1cr79p8q82lpj9d0y6q24xmfkxmnlqv8ivkd0baj7fxfb1nb8sak"; depends=[DiceKriging doParallel e1071 emoa foreach ggplot2 iterators Matrix mvtnorm quadprog]; };
   mitml = derive2 { name="mitml"; version="0.3-5"; sha256="1s888r9y2ri39b48h1iypps6lddqkqv3g31l2sjmi2pvyccfpkwb"; depends=[haven jomo pan]; };
   mitools = derive2 { name="mitools"; version="2.3"; sha256="0w76zcl8mfgd7d4njhh0k473hagf9ndcadnnjd35c94ym98jja33"; depends=[]; };
@@ -8087,10 +8254,9 @@ in with self; {
   mixdist = derive2 { name="mixdist"; version="0.5-4"; sha256="100i9mb930mzvdha31m1srylmpa64wxyjv6pkw1g5lhm1hsclwm3"; depends=[]; };
   mixedMem = derive2 { name="mixedMem"; version="1.1.0"; sha256="0j8w3qfhanyrkkxipdxfdajv15qba8r2rm06iiv3kywficzgkxgv"; depends=[BH gtools Rcpp RcppArmadillo]; };
   mixedsde = derive2 { name="mixedsde"; version="3.0"; sha256="1libm4pyzfqi11hcx823qdhgshdsy84dzv7jhz3b89w9bkla5l17"; depends=[MASS moments plot3D sde]; };
-  mixer = derive2 { name="mixer"; version="1.8"; sha256="1r831jha7qrxibw5m3nc3l6r887ihzxzsj65yjnbl5cf5b8y19bb"; depends=[]; };
   mixexp = derive2 { name="mixexp"; version="1.2.5"; sha256="0nbf10xhrr51rb1b2apcj4p3ci8xbi7flgz500ar3mxh8h8l74sq"; depends=[daewr gdata lattice]; };
   mixlink = derive2 { name="mixlink"; version="0.1.5"; sha256="0ywgrcplhspc0x5fniw52xqz20y7j9mwgy4ky8lv3vii659mr52m"; depends=[mvtnorm numDeriv Rcpp RcppGSL]; };
-  mixlm = derive2 { name="mixlm"; version="1.2.2"; sha256="1za45p1i7753phd7nclvnlhkh79xjmnfzq1l18afsil0kv9my1is"; depends=[car leaps multcomp pls pracma]; };
+  mixlm = derive2 { name="mixlm"; version="1.2.3"; sha256="0i7nrn31yaicdpwfssnid1x8w51iv17lcl96zfr1pgrf97d7gkqd"; depends=[car leaps multcomp pls pracma]; };
   mixor = derive2 { name="mixor"; version="1.0.3"; sha256="1qnrfd0hggad81rn8ryfm9l0cpd59ifj9sxc1bav35bma535azdv"; depends=[]; };
   mixpack = derive2 { name="mixpack"; version="0.3.6"; sha256="0q19mal86qlriwilabgy3sn33iymi5hl3wa33kvb8cd1dgdmjr7a"; depends=[mvtnorm Rcpp RcppArmadillo]; };
   mixreg = derive2 { name="mixreg"; version="0.0-5"; sha256="0wsb1z98ymhshw9nhsvlszsanflxv3alwpdsw8lr3v62bkwka8zr"; depends=[]; };
@@ -8099,21 +8265,23 @@ in with self; {
   mixtNB = derive2 { name="mixtNB"; version="1.0"; sha256="0lqbm1yl54zfs0xcmf3f2vcg78rsqyzlgvpydhmhg7x6dkissb22"; depends=[]; };
   mixtools = derive2 { name="mixtools"; version="1.1.0"; sha256="13wdm0xs5bakhpa8ypg6lvhjaqkxyabwz4glxdwn0jwdvkcdhgsl"; depends=[MASS segmented survival]; };
   mixtox = derive2 { name="mixtox"; version="1.3.2"; sha256="0mdnp1yrcxvan5l7jj91s41vq5y1kdnkhhinqrklmg4ph5f29dmq"; depends=[minpack_lm]; };
-  mixture = derive2 { name="mixture"; version="1.4"; sha256="0k9pzcgfjyp0rmcma26kr2n8rcwmijznmdpvqidgl3jay20c87ca"; depends=[]; };
+  mixture = derive2 { name="mixture"; version="1.5"; sha256="1ahr8jw93xnd5hmy3h4sr209ql7gmkwbvnnfmiplbpc17czqgcn4"; depends=[]; };
   mize = derive2 { name="mize"; version="0.1.1"; sha256="18mnpwwbwlyx0ixsjqai28ahp4g0wncv8c5qwy17xq2zbhwlq3jh"; depends=[]; };
-  mizer = derive2 { name="mizer"; version="0.2"; sha256="0cpal9lrjbvc923h499hbv4pqw3yjd4jvvhgayxgkak2lz2jzmcz"; depends=[ggplot2 plyr reshape2]; };
+  mizer = derive2 { name="mizer"; version="0.4"; sha256="0ir6hx3fb4lkfgg7dln96fd50fr4jdrxbqp70461fsyzi3lxn6nv"; depends=[ggplot2 plyr Rcpp reshape2]; };
   mkde = derive2 { name="mkde"; version="0.1"; sha256="04v84arpnmjrkk88ffphnhkz32x7y0dypk75jfmbbgcgv59xlglv"; depends=[raster Rcpp sp]; };
-  mkin = derive2 { name="mkin"; version="0.9.46.3"; sha256="145lqb9aiq08r0g645r7n01fkryndb2gczmlk585ddjqvjjppba2"; depends=[deSolve FME inline minpack_lm R6 rootSolve]; };
+  mkin = derive2 { name="mkin"; version="0.9.47.1"; sha256="1cz6f9122im594dvqdmdm9yjlnmwzrx2ka63dgj0zf1ysqzf0872"; depends=[deSolve FME inline minpack_lm R6 rootSolve]; };
   mkssd = derive2 { name="mkssd"; version="1.1"; sha256="1qqzy6fn6sc3lxahc19hzzf1hzxsyvxqi7npynw0vkknlrvh2ijp"; depends=[]; };
   mlDNA = derive2 { name="mlDNA"; version="1.1"; sha256="0d9lydiwar98hin26slnym4svn0g1xmyn212vvzsx9lzlvs5a9k4"; depends=[e1071 igraph pROC randomForest ROCR rsgcc snowfall]; };
   mlPhaser = derive2 { name="mlPhaser"; version="0.01"; sha256="1s2mqlnbcjdkx0ghvr2sw9rzggqa4jy2vzi9vbyqkh6795lgck6n"; depends=[]; };
   mlVAR = derive2 { name="mlVAR"; version="0.4"; sha256="08iaq6wq0ngd60nhmlj8c0x8r1fal1zfv2zpd6ll54szcvdbxahr"; depends=[abind arm clusterGeneration corpcor dplyr lme4 MplusAutomation mvtnorm plyr qgraph]; };
+  mlapi = derive2 { name="mlapi"; version="0.1.0"; sha256="023vk5bp8cjcq88sapkl87kdxr92bay1dyxl6xirnyj699pyj51k"; depends=[Matrix R6]; };
   mlbench = derive2 { name="mlbench"; version="2.1-1"; sha256="1rp035qxfgh5ail92zjh9jh57dj0b8babw3wsg29v8ricpal30bl"; depends=[]; };
-  mldr = derive2 { name="mldr"; version="0.3.22"; sha256="0q5dpqx6zapawjjq8rqk112w5qsk7r6sc90y63yvllk9yhdgygyw"; depends=[circlize shiny XML]; };
+  mlbgameday = derive2 { name="mlbgameday"; version="0.0.1"; sha256="1w0rzdbldsv1440vjnx9g2jz6b458gxsk55lmc8n8x16wz45cd2b"; depends=[DBI doParallel dplyr foreach iterators magrittr purrr stringr xml2]; };
+  mldr = derive2 { name="mldr"; version="0.4.0"; sha256="1nx21yyxfaiyxpbjkc5sif6pis5v2skisxcxdqk4479h54qzwlj3"; depends=[circlize shiny XML]; };
   mldr_datasets = derive2 { name="mldr.datasets"; version="0.4.0"; sha256="0kbfaf39vkhvscw47bkx2mmc6cmgwz1cys62iiw3yb6kvkzddr3s"; depends=[]; };
   mle_tools = derive2 { name="mle.tools"; version="1.0.0"; sha256="02yndj1if31zr9y805mq5km5n8jz4w9jz1bmaz9nnqsqimrnigrb"; depends=[]; };
   mlearning = derive2 { name="mlearning"; version="1.0-0"; sha256="0r8xfaxw83s2r27b8x5qd0k4r5ayxpkafzn9b1a0jvsr87i6520r"; depends=[class e1071 ipred MASS nnet randomForest]; };
-  mlegp = derive2 { name="mlegp"; version="3.1.4"; sha256="1932544irhzhf6a8rjyh66j57h9awlhwd6xam603bamfg106cmg2"; depends=[]; };
+  mlegp = derive2 { name="mlegp"; version="3.1.6"; sha256="12w6gw1g1xn3i42pgall09w5im8gf84h28d3fa9m3fhkifkid2db"; depends=[]; };
   mleur = derive2 { name="mleur"; version="1.0-6"; sha256="0mddphq3b6y2jaafaa9y41842kcaqdl3dh7j4pva55q2vcjcclj7"; depends=[fGarch lattice stabledist urca]; };
   mlgt = derive2 { name="mlgt"; version="0.16"; sha256="1nvdq6mvgr39ikkf73aggsb6pmbw132injj8fdkr8hgcmwm6lgd9"; depends=[seqinr]; };
   mlica2 = derive2 { name="mlica2"; version="2.1"; sha256="0c3m1zd9x99n6lw12hfzmd59355z51xa8rhg1h7qwfn9p86r826f"; depends=[]; };
@@ -8121,20 +8289,20 @@ in with self; {
   mlmRev = derive2 { name="mlmRev"; version="1.0-6"; sha256="0mvmahnbbp478xwldj4wlsjib4v4afhs07643gxgcqpi56zbd5h7"; depends=[lme4]; };
   mlma = derive2 { name="mlma"; version="4.0-1"; sha256="0pk2h4m74r95dfkqzliixi6z1rwdfc6gbz8c3162y22m919f00vc"; depends=[car gplots lme4]; };
   mlmc = derive2 { name="mlmc"; version="1.0.0"; sha256="01h7w0ajyg3bccynlpbi3yjpy089wczbfbajpg6yw5v4dppw7k7a"; depends=[ggplot2 Rcpp]; };
-  mlmm = derive2 { name="mlmm"; version="1.0"; sha256="0n99pjfg60ds14v636h9j77hhdvl9klynpw0wv61020vbmhn22b0"; depends=[BH ggplot2 MASS Matrix Rcpp RcppEigen rstan rstantools StanHeaders]; };
   mlmmm = derive2 { name="mlmmm"; version="0.3-1.2"; sha256="1m5ziiqs3ll1xjm1yf7x4sdc910jypn3kjnbadf95xxkvqmfrsqq"; depends=[]; };
   mlogit = derive2 { name="mlogit"; version="0.2-4"; sha256="15ndly7i56k8blgvpn15ixxnqx9yvbci7n3mb3hm9mnrxwh5v7sx"; depends=[Formula lmtest MASS maxLik statmod zoo]; };
   mlogitBMA = derive2 { name="mlogitBMA"; version="0.1-6"; sha256="1wl8ljh6rr1wx7dxmd1rq5wjbpz3426z8dpg7pkf1x9wr94a2q25"; depends=[abind BMA maxLik]; };
   mlr = derive2 { name="mlr"; version="2.11"; sha256="1fs62xzxgk75k3b4wkxh2qkij03m5i1bbmacgffwq4xak3mr64ma"; depends=[backports BBmisc checkmate data_table ggplot2 parallelMap ParamHelpers stringi survival]; };
-  mlrMBO = derive2 { name="mlrMBO"; version="1.1.0"; sha256="1858a01qb531s1bylvmlkl10f41azwiwx8jy1033ycv6llqjgs3a"; depends=[backports BBmisc checkmate data_table lhs mlr parallelMap ParamHelpers smoof]; };
+  mlrMBO = derive2 { name="mlrMBO"; version="1.1.1"; sha256="1r6p5ph7nyqs6cqqsg04mass1zppys75n8448lv6iadlm499jzg8"; depends=[backports BBmisc checkmate data_table lhs mlr parallelMap ParamHelpers smoof]; };
   mlsjunkgen = derive2 { name="mlsjunkgen"; version="0.1.1"; sha256="109ag52x4y3rzx8yccilrnl24mz4ximzx6v4lrbak7dpiclqrw7a"; depends=[]; };
-  mlt = derive2 { name="mlt"; version="0.2-0"; sha256="09pvqyyzlb76x47v2lbgsdrld0z0r1v3c29q3a0dsx62ia367mqr"; depends=[alabama basefun BB numDeriv quadprog sandwich survival variables]; };
-  mlt_docreg = derive2 { name="mlt.docreg"; version="0.2-0"; sha256="1n23bjfjacyq7b9n47ai9is8p0ka6m36085c0q1i47zpz5kv6d5k"; depends=[mlt numDeriv]; };
-  mltools = derive2 { name="mltools"; version="0.3.3"; sha256="0r2i46hkzckgl3ly7sdzkzi94bwzkni2rqyrz647r5rhjqhfgkhj"; depends=[data_table Matrix]; };
+  mlt = derive2 { name="mlt"; version="0.2-1"; sha256="0ir792clkfzvxl2w1r0akbp7isi7jspq3blhkrzh2rsf15x48fha"; depends=[alabama basefun BB numDeriv quadprog sandwich survival variables]; };
+  mlt_docreg = derive2 { name="mlt.docreg"; version="0.2-1"; sha256="08va5gfsl71ijrrij0kyr7icjbpfm0wxfvp0554sxvmca75bqqcl"; depends=[mlt numDeriv]; };
+  mltools = derive2 { name="mltools"; version="0.3.4"; sha256="18dxhims684a6fk44nrzdnry8dpxs69wim8kd7zamp8zdhy38kyy"; depends=[data_table Matrix]; };
   mlxR = derive2 { name="mlxR"; version="3.2.0"; sha256="1a0104h4b0qag20xv5sg8m4b0ndvz843lnc4jypfxns3bi5k4v1m"; depends=[ggplot2 Rcpp XML]; };
-  mma = derive2 { name="mma"; version="5.0-1"; sha256="02y8fahaz3lxix9cg9sxpyap441k1az9bf1zadqzx8mvw510ixvs"; depends=[car doParallel foreach gbm gplots survival]; };
+  mma = derive2 { name="mma"; version="6.0-0"; sha256="1wb6d8943yfi85d6s1bk8j853lkni4yk876pnjziq16x93lgkjsv"; depends=[car doParallel foreach gbm gplots plotrix survival]; };
   mmand = derive2 { name="mmand"; version="1.5.3"; sha256="1n0h7nia9jjc11g8417nfd3wsg4m3bmblm9bsjd0b52vqxhpxmzh"; depends=[Rcpp]; };
   mmap = derive2 { name="mmap"; version="0.6-15"; sha256="0p3dsq0vffb0x0i8xh8p1r0b2hwk4zfi6nbwsi3cyaj1m7dzm0fh"; depends=[]; };
+  mmapcharr = derive2 { name="mmapcharr"; version="0.1.0"; sha256="0szabsacbqm51jw4q4pg304vvgqsqna5c7q1sh3f54za6dddmyxw"; depends=[BH Rcpp]; };
   mmc = derive2 { name="mmc"; version="0.0.3"; sha256="03nhfhiiadga8mcp33kj20g33v9n5i62fdqgi20h5p80g849k719"; depends=[MASS survival]; };
   mmcm = derive2 { name="mmcm"; version="1.2-6"; sha256="0lk2lk8j4hq6shw3vpq53gvh2w1gwkayvgfny4i04k5fglbwivg7"; depends=[mvtnorm]; };
   mmds = derive2 { name="mmds"; version="1.1"; sha256="0f5qzkfhi7vg8vsd8r41idmbwrrgc7qzfnp81adms2yzrza17wrw"; depends=[]; };
@@ -8144,7 +8312,7 @@ in with self; {
   mmm = derive2 { name="mmm"; version="1.4"; sha256="1nydian004nldqhyw3x15w6qfml2gkjc0x8ii54faz563byjv3d8"; depends=[gee]; };
   mmm2 = derive2 { name="mmm2"; version="1.2"; sha256="1h9pn5s3jjs4bydrr1qysjb4hv7vs4h3m7mvi22ggs2dzyz3b298"; depends=[gee]; };
   mmod = derive2 { name="mmod"; version="1.3.3"; sha256="1dz6887mlqbagjj98wcabmxj9hvsz8pgsizy1fqkwjhhs44c62y4"; depends=[adegenet pegas]; };
-  mmpf = derive2 { name="mmpf"; version="0.0.3"; sha256="0mwsnhz1f62l8msisz9m1aln7w24rg9844bxh07g2y7sa29ls1lp"; depends=[checkmate data_table]; };
+  mmpf = derive2 { name="mmpf"; version="0.0.4"; sha256="1lskpnhqiimf7ch5xg5f0mpvhxy18a5w9daxpp4133vx1dydm4c2"; depends=[checkmate data_table]; };
   mmpp = derive2 { name="mmpp"; version="0.6"; sha256="16aypjf4i0ya3qgxqrrg8y0xbnq1pnqky1dpkgln5q494hphyg91"; depends=[]; };
   mmppr = derive2 { name="mmppr"; version="0.1"; sha256="0fswkqcw0xkqd9gmqabb61i32zscp5jzfx0z43wq7mrlwynryylv"; depends=[expm reshape2]; };
   mmtfa = derive2 { name="mmtfa"; version="0.1"; sha256="113bpcb05i78y78byrdn9j45dfcar7q8z7qmlid8cl6b8cjv1vfz"; depends=[matrixStats mvnfast]; };
@@ -8154,6 +8322,7 @@ in with self; {
   mnormpow = derive2 { name="mnormpow"; version="0.1.1"; sha256="0z53vwhkhkkr6zrjhd3yr14mb02vh7lr63frf0ivajndxiap0s9v"; depends=[]; };
   mnormt = derive2 { name="mnormt"; version="1.5-5"; sha256="1b34xxrnf35khsx82mhvmk96sgfr2flyasaah7qkb2976pwxay7z"; depends=[]; };
   mnreadR = derive2 { name="mnreadR"; version="1.2.0"; sha256="0ymkwbfrba5nnnvi3s52fdhzva7qd0b7ab75j1m0s2i546cbwv9l"; depends=[dplyr ggplot2]; };
+  mobForest = derive2 { name="mobForest"; version="1.3.0"; sha256="0gzn3lyi9ph5dcrfbw4xs4rkf5ngf28abf1n8vap96fdhc6nmg88"; depends=[modeltools party sandwich strucchange zoo]; };
   mobsim = derive2 { name="mobsim"; version="0.1.0"; sha256="077hw1162giwc90y5dvj9052i5hxdf2ii29m9q8ky028375dsd0f"; depends=[Rcpp sads vegan]; };
   mockery = derive2 { name="mockery"; version="0.4.1"; sha256="1h8976rlwykpqrh2p6x3bcyxdhlhcwsi1wvkdk08k6hynbw877cm"; depends=[testthat]; };
   mockr = derive2 { name="mockr"; version="0.1"; sha256="0340v6189ivlzzriwk7yhf3v2k651x05fd1xrqfxxjgwhysaqj6z"; depends=[lazyeval]; };
@@ -8165,53 +8334,54 @@ in with self; {
   modcmfitr = derive2 { name="modcmfitr"; version="0.1.0"; sha256="1d6fi7pc10w2a97h1prhkg5cvzmxjp11c5bwrz90zry0m8anwjyh"; depends=[gtools nloptr]; };
   modeest = derive2 { name="modeest"; version="2.1"; sha256="0l4y7yhkgsxycdd2lck0g8g6k2r059hwlrrcpl46md3rva4jgbnp"; depends=[]; };
   modehunt = derive2 { name="modehunt"; version="1.0.7"; sha256="0qz9kmf1qfs2dr7kzm9l7ac0h5rvi3b9j9896p991sk4bcalsl0b"; depends=[]; };
+  model4you = derive2 { name="model4you"; version="0.9-1"; sha256="13ask2hcrw2r6qq4yz6wm2nsj2iwinnn0w78lj11fdrsj5cymnqv"; depends=[Formula ggplot2 gridExtra partykit sandwich survival]; };
   modelObj = derive2 { name="modelObj"; version="3.0"; sha256="0wc67zsh26zyr7x9s229g2mppfk6g6z12j74zj2bdhk2m7i2x3zq"; depends=[]; };
   modelfree = derive2 { name="modelfree"; version="1.1-1"; sha256="0ammka2wxx90z31zfzypw9dk5n118l0vxhykxbx6srfig2vdyn82"; depends=[PolynomF SparseM]; };
   modelr = derive2 { name="modelr"; version="0.1.1"; sha256="1rqw0b583vp107zqp4h3wj51dvv4hb3wszfr1f5f48xassc53f95"; depends=[broom dplyr lazyeval magrittr purrr tibble tidyr]; };
   modeltools = derive2 { name="modeltools"; version="0.2-21"; sha256="0ynds453xprxv0jqqzi3blnv5w6vrdww9pvd1sq4lrr5ar3k3cq7"; depends=[]; };
   modelwordcloud = derive2 { name="modelwordcloud"; version="0.1"; sha256="0ardib0h923i7jk8bgcq6pn2zazx9acf9sdggifsk46hdz8hvqnm"; depends=[]; };
+  moderndive = derive2 { name="moderndive"; version="0.1.1"; sha256="11xxklaqizlx36nyx3nzj9xkszg99qsmjqmr59z235h4wkrw8xg3"; depends=[assertive broom dplyr formula_tools janitor knitr magrittr rlang stringr tibble]; };
   modes = derive2 { name="modes"; version="0.7.0"; sha256="185qjrmz2sj0l5931g4d3kx3jpgjn4rf4lln84h6g97prk1ykqmj"; depends=[]; };
   modest = derive2 { name="modest"; version="0.3-1"; sha256="07rs014hdcabp2n0gg14pz2gmqgbw38vjv7a80vkzzh3601hxqws"; depends=[knitr rhandsontable shiny shinyBS]; };
-  modeval = derive2 { name="modeval"; version="0.1.3"; sha256="10yjba2dlwrgd3ycw10y1sa3xdxf2spq829bbxwfissc5l9gk48x"; depends=[caret dplyr e1071 ggplot2 gridExtra knitr magrittr mlbench ModelMetrics psych purrr stringr tibble]; };
   modifiedmk = derive2 { name="modifiedmk"; version="0.1.1"; sha256="1hn079nxgn1h8p89r93g8zxhpr0l6x9c6jzvvs8wmyvh7s9yahla"; depends=[]; };
   modiscloud = derive2 { name="modiscloud"; version="0.14"; sha256="0vwhfp50yb21xkanvzk983vk0laflv60kj1ybx3fydfljwqx0rwj"; depends=[date raster rgdal sfsmisc sp]; };
-  modmarg = derive2 { name="modmarg"; version="0.9.0"; sha256="0mjrrw6jpdmy826jr29vp3hyzqrn5gscqq5d7r21yggqp2ahzdkk"; depends=[]; };
+  modmarg = derive2 { name="modmarg"; version="0.9.2"; sha256="1clyfvn5k87nyh5cj4b0yi2zkavwvnirhlirxkzi8m2qijdl9vgh"; depends=[]; };
   moduleColor = derive2 { name="moduleColor"; version="1.08-3"; sha256="183l968l49b7jbmvsjjnmk1xd36cpjkp777c00gw1f73h6nb2na8"; depends=[dynamicTreeCut impute]; };
   modules = derive2 { name="modules"; version="0.6.0"; sha256="0nzypmx8p84dd7pdw7ilrjrc2nji5qzwylb9yn1zmr8wp5lzvidc"; depends=[stringr]; };
   modygliani = derive2 { name="modygliani"; version="1.0"; sha256="01g96cdm4hgbsh6xsdfjg7vp7zb138sxwgv0msrlm27a6p4fcnlx"; depends=[]; };
   moezipfR = derive2 { name="moezipfR"; version="1.0.2"; sha256="0sfl1c7cvm1milcglcvz9lyvgricsdm7shx0jxyn50y7xz0padww"; depends=[tolerance VGAM]; };
-  mogavs = derive2 { name="mogavs"; version="1.0.1"; sha256="1bzjrcisbg0fb8kj8x9ngd9i1nrhif1rdacz6nrny6xrmw0m3ckp"; depends=[cvTools]; };
-  mokken = derive2 { name="mokken"; version="2.8.9"; sha256="086l41rrsb1g6n2wvidhfmgabxbxgragyq3yx5zwcc7xh6amg802"; depends=[poLCA]; };
+  mogavs = derive2 { name="mogavs"; version="1.1.0"; sha256="0lhmwdv991bv7j8k066jr7ii94w60ydjpf5pzmv8jlblf3w2pr02"; depends=[cvTools]; };
+  mokken = derive2 { name="mokken"; version="2.8.10"; sha256="1lh9gqjm13k7wfmff2vikc1qg7lqr4fagm3jiklr1pv9vgn4dnc3"; depends=[poLCA]; };
   moko = derive2 { name="moko"; version="1.0.1"; sha256="1d1gyv44z8k196hfh8a9iccmlrwb42bj1xzabs07h306gpi9m73d"; depends=[DiceKriging DiceOptim emoa GenSA GPareto mco]; };
   molaR = derive2 { name="molaR"; version="4.3"; sha256="1bzk7k6d1zbi0fhf9xwdg5mv7dcgajjbb6wxafx4nc2fjxhlldzi"; depends=[alphahull rgl Rvcg]; };
-  mombf = derive2 { name="mombf"; version="1.9.5"; sha256="1s776bvfkivif7i3338l1pk8qi5b6b7sxb9zgcidw4kwmj388rdd"; depends=[actuar mgcv mvtnorm ncvreg survival]; };
+  mombf = derive2 { name="mombf"; version="1.9.6"; sha256="01qvgxiw0wqp7j4l1qkdy88fvmydz5il09k6nrblbq0sfjf0khmq"; depends=[actuar mgcv mvtnorm ncvreg survival]; };
   momentchi2 = derive2 { name="momentchi2"; version="0.1.5"; sha256="1fv0jmwws4mkl9dsaybfpj29ncvqx2idsijgwz2qjblcg309a6k9"; depends=[]; };
   moments = derive2 { name="moments"; version="0.14"; sha256="0f9y58w1hxcz4bqivirx25ywlmc80gbi6dfx5cnhkpdg1pk82fra"; depends=[]; };
-  momentuHMM = derive2 { name="momentuHMM"; version="1.2.0"; sha256="13r5j4548x9511dgazwwl0k2d8alicrcw8g85s0zmgyrciwrzhil"; depends=[argosfilter boot Brobdingnag car CircStats conicfit crawl doParallel foreach geosphere ggmap ggplot2 gstat LaplacesDemon MASS mitools moveHMM mvtnorm nleqslv numDeriv qdapRegex raster Rcpp RcppArmadillo sp splines2 survival]; };
+  momentuHMM = derive2 { name="momentuHMM"; version="1.3.0"; sha256="0cbdmx1rq4524xphc3ncjfz5gqdp5k2zmndg1fifqzjc2n3qki9l"; depends=[argosfilter boot Brobdingnag car CircStats conicfit crawl doParallel foreach geosphere ggmap ggplot2 gstat LaplacesDemon MASS mitools moveHMM mvtnorm nleqslv numDeriv qdapRegex raster Rcpp RcppArmadillo sp survival]; };
   momr = derive2 { name="momr"; version="1.1"; sha256="091vzaw8dm29q89lg2iys25rbg2aslgdn9sk06x038nngxdrn95r"; depends=[gplots Hmisc nortest]; };
   mondate = derive2 { name="mondate"; version="0.10.01.02"; sha256="18v15y7fkll47q6kg7xzmj5777bz0yw4c7qfiw2bjp0f3b11qrd2"; depends=[]; };
-  mongolite = derive2 { name="mongolite"; version="1.2"; sha256="19zhscsgqvzx5gqryzl82dw6impc6sacx2shanmnj4zfgs7bgwqr"; depends=[jsonlite openssl]; };
-  monitoR = derive2 { name="monitoR"; version="1.0.5"; sha256="1rqcdg4gha5vh3dvxqzr2albi2capm18rkgf79rd769hrk3z09l5"; depends=[tuneR]; };
+  mongolite = derive2 { name="mongolite"; version="1.5"; sha256="06qry561kdg4lxvdayghmhmgb94sqy16gxjp081xnmya0vqf9wjy"; depends=[jsonlite openssl]; };
+  monitoR = derive2 { name="monitoR"; version="1.0.7"; sha256="1h1g0m1j13mz37xxwck4s7a0bfqvi0nrzfw60j7bkzaah8zxcc9n"; depends=[tuneR]; };
   monkeylearn = derive2 { name="monkeylearn"; version="0.1.3"; sha256="1sq30pkqd8q4dck4ck1lfdfyiir5p4c87i3xnvx7w9spx3c6pxpd"; depends=[digest httr jsonlite tibble]; };
-  monmlp = derive2 { name="monmlp"; version="1.1.4"; sha256="09rjv0d1z6v1qxl0csnip53gc00y23r59xbspn8fqwrwjd1v30l1"; depends=[optimx]; };
-  monogeneaGM = derive2 { name="monogeneaGM"; version="1.1"; sha256="0fbz26jx05xmna799s086khy6j8xbvv91vh544npd49isnag1v6v"; depends=[ape circular cluster geomorph gplots phytools rgl]; };
+  monmlp = derive2 { name="monmlp"; version="1.1.5"; sha256="19cx60csm8mnf6ksg64vlhi8wi1c7bmv9l55y9zmaljblr0kmzxf"; depends=[optimx]; };
   monographaR = derive2 { name="monographaR"; version="1.2.0"; sha256="0sis2kw07ifq54w6p56zspmlnvxvq6ajb0sdvc9fk480sfxg9806"; depends=[circular maptools png raster rmarkdown sp]; };
   monomvn = derive2 { name="monomvn"; version="1.9-7"; sha256="1bz967sl6ji84x9v0fypjn75d39naaqgvw31n9lgcd5lyj39hbsk"; depends=[lars MASS mvtnorm pls quadprog]; };
   monoreg = derive2 { name="monoreg"; version="1.2"; sha256="16n622j1j998a5fhn1c1qbzk5bfa5h09d95ry89gsd00p40hqg0a"; depends=[]; };
   monreg = derive2 { name="monreg"; version="0.1.3"; sha256="08rcg2xffa61cgqy8g98b0f7jqhd4yp8nx6g4bq3g722aqx4nfg3"; depends=[]; };
   moonBook = derive2 { name="moonBook"; version="0.1.3"; sha256="1wy8qwzymh482gfb4v9v74k666mq8dz2yird7gz43l3hps22kfgb"; depends=[nortest survival]; };
   moonsun = derive2 { name="moonsun"; version="0.1.3"; sha256="1y8mwxmcy4iz444c2fayyi4i0jk1k561dp6cbjg2b3lmdml0whmi"; depends=[]; };
-  mopa = derive2 { name="mopa"; version="1.0.0"; sha256="0ck3ha6nzpmij91b97vgp1xxgzgxs0jc80hgfivxk1mgilh4rv7a"; depends=[abind dismo e1071 earth gtools lattice PresenceAbsence randomForest ranger raster rpart sampling sp spam spatstat splancs tree]; };
+  mopa = derive2 { name="mopa"; version="1.0.1"; sha256="1v876al1afli002v44b4j2acb6n66f0hzz4bmcl60jyny43d1n0c"; depends=[abind dismo e1071 earth gtools lattice PresenceAbsence randomForest ranger raster rpart sampling sp spam spatstat splancs tree]; };
   mopsocd = derive2 { name="mopsocd"; version="0.5.1"; sha256="10hssnm1afqmxa9kw6ifqnz3p3yyjrmxgi98zlj31a5g4nis8wb1"; depends=[]; };
   morgenstemning = derive2 { name="morgenstemning"; version="1.0"; sha256="17y90cf8ajmkfwla0hm4jgkbkd1mxnym63ph2468sfxkhn0r3v88"; depends=[]; };
-  morse = derive2 { name="morse"; version="2.2.0"; sha256="0l52hwhbspf1d6wi0qnwgwjjc1kkixkfdsf81jvwshnxbci4s3kw"; depends=[coda dplyr epitools ggplot2 gridExtra reshape2 rjags stringr]; };
+  morse = derive2 { name="morse"; version="3.0.0"; sha256="18657cd3pqy170wapxy3jw4cc13710bf7ix07dss30gpkbvilyvl"; depends=[coda dplyr epitools ggplot2 gridExtra magrittr reshape2 rjags tibble tidyr zoo]; };
   mortAAR = derive2 { name="mortAAR"; version="1.0.0"; sha256="0d599npgfk11mv39rk2a64vs5x31g4f7n1n13mzzzcy1lz5y1ih2"; depends=[magrittr Rdpack reshape2]; };
   mosaic = derive2 { name="mosaic"; version="1.1.1"; sha256="1c82im22sj0sfqnwwfg7kyp2dllj89f79by07220br5wpa18bsn7"; depends=[broom dplyr ggdendro ggformula ggplot2 glue gridExtra lattice latticeExtra lazyeval MASS Matrix mosaicCore mosaicData readr tidyr]; };
   mosaicCalc = derive2 { name="mosaicCalc"; version="0.5.0"; sha256="05s14rmgi15xcz50hcz7l26l95yx9g4i3kihzh0laz8bpi443i39"; depends=[MASS mosaic mosaicCore]; };
   mosaicCore = derive2 { name="mosaicCore"; version="0.4.2"; sha256="17yani6781znrrnrcji1q7h6y422bq443gzly0mm6yn8bj7v5qrc"; depends=[dplyr lazyeval MASS rlang tidyr]; };
-  mosaicData = derive2 { name="mosaicData"; version="0.14.0"; sha256="0f092wp2lpj8rk6r2bd5mxp4q3n7ia9h838z8prrz56vwh3gbpw0"; depends=[]; };
+  mosaicData = derive2 { name="mosaicData"; version="0.16.0"; sha256="09kp3d3h3xmz9fnjaz9nr1jldjd93gyq5gq9sk2a2ymgnbmbc5wm"; depends=[]; };
   mosaicModel = derive2 { name="mosaicModel"; version="0.3.0"; sha256="1gx4rzh0h922gyb50vz6q5vqqp5ry5hf2mq95948q2gcady91k5w"; depends=[caret dplyr ggformula ggplot2 knitr lazyeval MASS mosaicCore testthat tibble tidyr tidyverse]; };
-  moult = derive2 { name="moult"; version="2.0.0"; sha256="177fhi3f5qsg2k4qb1cgviq96aln80qwri1hf9yym6wrzn8crj7r"; depends=[Formula Matrix]; };
+  motmot_2_0 = derive2 { name="motmot.2.0"; version="1.1.2"; sha256="1hnpp2850yhvxki7pcwscg79knvxzs3gx4b19wza0wg3p02fvsb6"; depends=[ape caper coda MASS mvtnorm]; };
+  moult = derive2 { name="moult"; version="2.1.0"; sha256="0k0969fwy648x25xw42w5ncimyw2cbq305rzf4m77p3pf0k50m9b"; depends=[Formula Matrix]; };
   mountainplot = derive2 { name="mountainplot"; version="1.2"; sha256="1bbgkps1yhfa0lmapqkhhl5mc63p0gzszxw2g910dbi1cjc0pphx"; depends=[lattice]; };
   mousetrack = derive2 { name="mousetrack"; version="1.0.0"; sha256="0lf0xh0c3xl27nh5w8wwyrm2jfzfajm2f73xjdgf746dp365qc8n"; depends=[pracma]; };
   mousetrap = derive2 { name="mousetrap"; version="3.1.0"; sha256="1r1cpfn6bcgk66lw0la6r3bsv62yhp2m3jkwn0g8rbwrhp9jyl6p"; depends=[cstab diptest dplyr fastcluster fields ggplot2 magrittr pracma psych RColorBrewer Rcpp scales tidyr]; };
@@ -8227,8 +8397,7 @@ in with self; {
   mpbart = derive2 { name="mpbart"; version="0.2"; sha256="1145n0lxmm0kjm2lc358d79hqws48crj17pjvmchl1pbfd7zi4r8"; depends=[bayesm cvTools mlbench mlogit]; };
   mpcv = derive2 { name="mpcv"; version="1.1"; sha256="0vwycspiw9saj811f6alkbijivy7szpahf35bxn2rpn2bdhbn21i"; depends=[lpSolve]; };
   mpe = derive2 { name="mpe"; version="1.0"; sha256="17bgdbg1zrf78djd3mwycidwibxvsis7pwkrcynvghcc8l2zfci9"; depends=[mvtnorm]; };
-  mph = derive2 { name="mph"; version="0.9"; sha256="11wcy23sv8x7aq6ky8wi0cq55yhjkkm9hn672qy803dwzzxv5y61"; depends=[]; };
-  mplot = derive2 { name="mplot"; version="0.8.1"; sha256="00q1ipp7bhh28wrw9wznn8d0hw3s3d5dw6p0jk0kp0mbgyig8kl0"; depends=[bestglm doParallel doRNG dplyr foreach ggplot2 glmnet googleVis leaps plyr reshape2 scales shiny shinydashboard]; };
+  mplot = derive2 { name="mplot"; version="1.0.1"; sha256="1bs9hy28hmiz630dwjynlc0apnyi7hz5h9p8al9dy0k7lcsmc4g1"; depends=[bestglm doParallel doRNG dplyr foreach ggplot2 glmnet googleVis leaps plyr reshape2 scales shiny shinydashboard tidyr]; };
   mpm = derive2 { name="mpm"; version="1.0-22"; sha256="0wijw8v0wmbfrda5564cmnp788qmlkk21yn5cp5qk8aprm9l1fnk"; depends=[KernSmooth MASS]; };
   mpmcorrelogram = derive2 { name="mpmcorrelogram"; version="0.1-4"; sha256="0gv9xswrfvndcjal0csab1w2cnl4rg8pznyxbz84b0qr95jg81ag"; depends=[vegan]; };
   mpmi = derive2 { name="mpmi"; version="0.42"; sha256="1j7xsgz3pgbb7a4ykrcj22isbi5svqsxcckai05q7b401h1ppsnh"; depends=[KernSmooth]; };
@@ -8237,8 +8406,9 @@ in with self; {
   mpr = derive2 { name="mpr"; version="1.0.4"; sha256="13fqvndwxzqa1safa43ad90pkiqnpqmgr0pkwp8lwmnxqmrmj0jb"; depends=[survival]; };
   mpt = derive2 { name="mpt"; version="0.5-4"; sha256="01akz72z6z5ybzika120v4v6ah13hfynh98rzbmqgbchijxbbkz6"; depends=[]; };
   mptools = derive2 { name="mptools"; version="1.0.1"; sha256="1g4fbfwxv9hir0jn22nh9854blgkh0b5jan3lv0888izj4isa1hc"; depends=[animation lattice latticeExtra raster rasterVis sp viridis zoo]; };
+  mr_raps = derive2 { name="mr.raps"; version="0.2"; sha256="069vyvsdgc5m7n2fd0h7jrllz789zvsxka7h5wiy36dc7lagd6f8"; depends=[nortest]; };
   mrMLM = derive2 { name="mrMLM"; version="2.1"; sha256="0ip8xd2dj6d4hxq18pf4j6mk4yl00ajci72rr485wk94cr0zj5hy"; depends=[ggplot2 gWidgets gWidgetsRGtk2 lars MASS ncvreg openxlsx qqman RGtk2 RGtk2Extras stringr]; };
-  mra = derive2 { name="mra"; version="2.16.10"; sha256="0fxa5yjr703wz3dkjpsh23083wgsp33q9kh0kj4m43p52xvic09f"; depends=[]; };
+  mra = derive2 { name="mra"; version="2.16.11"; sha256="0268msdy4cs2ifpagmwiabi6aav54ckn214ai18aqv2h97hmixw0"; depends=[]; };
   mratios = derive2 { name="mratios"; version="1.3.17"; sha256="0a2pn4234ri5likaqbxgkw8xqmwchr6fak3nninral0yzd4rcal5"; depends=[mvtnorm]; };
   mrbsizeR = derive2 { name="mrbsizeR"; version="1.0.1"; sha256="1gr8mx1byq8nw095yla4gn2ascgw4d90j7a3a3rzwfdavkjj7167"; depends=[fields maps]; };
   mrds = derive2 { name="mrds"; version="2.1.18"; sha256="0nhfyl5vcisb9z33sm37vfgnfkkmikr2wwvsjq84jaw2x2jmbxvz"; depends=[mgcv numDeriv optimx Rsolnp]; };
@@ -8254,13 +8424,13 @@ in with self; {
   msSurv = derive2 { name="msSurv"; version="1.2-2"; sha256="02qm3mq17d2yj5mbz6gapd3zfi1wmiad5hpyimcb39impk43n2hf"; depends=[class graph lattice]; };
   msaFACE = derive2 { name="msaFACE"; version="0.1.0"; sha256="1lh8crz507nlddm946lmn73xbnsh4cs0kg238ysnsvxs726c83fs"; depends=[]; };
   msaR = derive2 { name="msaR"; version="0.3.0"; sha256="0lj9yhsissr4rgavyhgdxi2nrkq2088darzraisx9jsirjr49jf8"; depends=[ape htmlwidgets]; };
-  msaenet = derive2 { name="msaenet"; version="2.7"; sha256="15jxdyc2s0dzjm6665win9y96ijyiv3ggin54z4rrh7qgv6vs7xa"; depends=[foreach glmnet Matrix mvtnorm ncvreg survival]; };
+  msaenet = derive2 { name="msaenet"; version="2.8"; sha256="1293qdvn2qv3prnp4rwwndcjnzk49v565yfvzrvb9j7sqvjshf07"; depends=[foreach glmnet Matrix mvtnorm ncvreg survival]; };
   msap = derive2 { name="msap"; version="1.1.8"; sha256="0z5lm782jjb9w1h5vgz8bmxjdcrq9zb3xp1w5cb479jjc7krlgg3"; depends=[ade4 ape]; };
-  mschart = derive2 { name="mschart"; version="0.2.1"; sha256="0pbzs05gx0qxyggaqld3ysi3aqdqrggj6d3zbzcj3m93q6xpabv8"; depends=[cellranger data_table officer purrr R6 writexl xml2]; };
+  mschart = derive2 { name="mschart"; version="0.2.2"; sha256="0h6q7vzrhw9ccj3m037kw72ylqdsj7hlf0bqpghqpa3sv280ap2n"; depends=[cellranger data_table htmltools officer R6 writexl xml2]; };
   mscstexta4r = derive2 { name="mscstexta4r"; version="0.1.2"; sha256="1hjcasmn33xav2mw085lcndv0432l6sz327aikf63491wj1sj7mw"; depends=[dplyr httr jsonlite pander stringi]; };
   mscsweblm4r = derive2 { name="mscsweblm4r"; version="0.1.2"; sha256="031s00wpr9zfjpii56m67q1phn05vqlhb8cfzhyf6fbrxvpb8k7n"; depends=[httr jsonlite pander]; };
   msda = derive2 { name="msda"; version="1.0.2"; sha256="05khpa5qasnngn6yvk87gv5262plqpw4knb6hzgy52w401k0y80r"; depends=[MASS Matrix]; };
-  msde = derive2 { name="msde"; version="1.0.2"; sha256="0r7kghy6czw5jwkblmiwf817ifmbgchgmj3lrr2bamvxqpb4h6gg"; depends=[Rcpp RcppProgress]; };
+  msde = derive2 { name="msde"; version="1.0.3"; sha256="18l5ca4s1ryyb9i0zsb03klm53f25klwyg171dqkn5z4bqwznp2m"; depends=[Rcpp RcppProgress]; };
   mseapca = derive2 { name="mseapca"; version="1.0"; sha256="115njdk8cv55zxd38hq9qaca686ykckni0f3xl8w3bn32gb5g9a7"; depends=[XML]; };
   msgl = derive2 { name="msgl"; version="2.3.6"; sha256="0qq9v8bb70iw67raygpzsg35nb2wdafp7rh7wzq42xd4gghi31ya"; depends=[BH Matrix Rcpp RcppArmadillo RcppProgress sglOptim]; };
   msgpackR = derive2 { name="msgpackR"; version="1.1"; sha256="0a6vm4q1zfy8wlvhl9wfy09ig1iag9fvjasz5w9bll7idky4ldx5"; depends=[]; };
@@ -8268,7 +8438,7 @@ in with self; {
   msgtools = derive2 { name="msgtools"; version="0.2.7"; sha256="1lk4r9gdhlfarl5z6a48aih682q7dvwa6lf31119lljpa5gmi92y"; depends=[devtools digest hunspell poio tibble]; };
   msir = derive2 { name="msir"; version="1.3.1"; sha256="1ipzgdffsqly3dp91pw7yp3h5cwn08l9qsj7cdmrykd42jc98950"; depends=[mclust rgl]; };
   msltrend = derive2 { name="msltrend"; version="1.0"; sha256="1rwy77ijf3hzq2zp47cijwvqcq34rdlfxwhrd9l56bvmlmzr1dqx"; depends=[changepoint forecast plyr Rssa tseries zoo]; };
-  msm = derive2 { name="msm"; version="1.6.4"; sha256="0h0h9cgavpylbj9692750if1hw7qylhsad549fqjx5l0zqbh3zhy"; depends=[expm mvtnorm survival]; };
+  msm = derive2 { name="msm"; version="1.6.6"; sha256="06m7fflb6lgjfnj9v4wjc63x2as8jvc24qmz6jvgm9fw7hnm24px"; depends=[expm mvtnorm survival]; };
   msma = derive2 { name="msma"; version="0.7"; sha256="0rrxxva71j8gk25hi6hycnyrhrdc0skcaj1bnmh029cqhjl3qma5"; depends=[mvtnorm]; };
   msme = derive2 { name="msme"; version="0.5.1"; sha256="1bkj10pgmv9q61384fwd2pxccclclc3knc5x212p42w4w49hnm1q"; depends=[lattice MASS]; };
   msmtools = derive2 { name="msmtools"; version="1.3"; sha256="0p7xpj78cjc1s015ma7vc38kqiy6wvpyixrdinx4ngig1pqfrq4p"; depends=[data_table msm survival]; };
@@ -8282,13 +8452,12 @@ in with self; {
   mtconnectR = derive2 { name="mtconnectR"; version="1.1.0"; sha256="068rp4n2afl9qgqrnp0a4lmnq7mq9wrc2yi361bfvib96gzg1fdw"; depends=[data_table dplyr dtw ggplot2 magrittr plyr proxy stringr tidyr XML]; };
   mthapower = derive2 { name="mthapower"; version="0.1.0"; sha256="17svh0q9a982a390fgwgvrc2kygxxgyacb3j6gcksbikjrvkcfpw"; depends=[]; };
   mtk = derive2 { name="mtk"; version="1.0"; sha256="0vq2xlxf86l92fl91qm8m4yfjyz1h8szmwxiics7sc9f0as0dkmy"; depends=[lhs rgl sensitivity stringr XML]; };
-  mtsdi = derive2 { name="mtsdi"; version="0.3.3"; sha256="1hx4m1jnfhkycxizxaklnd9illajqvv1nml8ajfn3kjmrb5z7qlp"; depends=[gam]; };
+  mtsdi = derive2 { name="mtsdi"; version="0.3.5"; sha256="0j4hl690n8x7zfpygw5qv0m0jyl8dnz1d3r4314w06h7c578n2kp"; depends=[gam]; };
   muRL = derive2 { name="muRL"; version="0.1-11"; sha256="1pyspp1wpd80hcla1zwnl3misqggfk0ls54akwnx5aa617bibzz8"; depends=[maps stringr]; };
   muStat = derive2 { name="muStat"; version="1.7.0"; sha256="18727xj9i9hcnpdfnl1b9wd6cp7wl1g74byqpda2gsrcardl57wz"; depends=[]; };
   muckrock = derive2 { name="muckrock"; version="0.1.0"; sha256="16lm1iiaaws7clby7qgblqdiznw6abjjgvsxlfpza7l2xdvplxpg"; depends=[]; };
-  mudata = derive2 { name="mudata"; version="0.1.1"; sha256="1ihfg5fhnwrwyvi5glvjbxvd26rx68pm1gbs34m8kdz9nwz7knj1"; depends=[dplyr ggplot2 jsonlite plyr reshape2]; };
   mudata2 = derive2 { name="mudata2"; version="1.0.0"; sha256="0wlj9kra99ll3vmhkrw3gibricq3gwfl27iymnzrvv847lpvqjml"; depends=[dplyr ggplot2 hms jsonlite lubridate magrittr readr rlang stringr tibble tidyr tidyselect]; };
-  mudfold = derive2 { name="mudfold"; version="1.0"; sha256="1zh9qh2ja91lk2z4lpkqinn63v577qivbl0qh3xixfr63primby7"; depends=[ggplot2 gtools reshape2 zoo]; };
+  mudfold = derive2 { name="mudfold"; version="1.1.0"; sha256="0mp25lad79dx2101srarx26my172jbkd6a0bzr87hjdgqr1pys5b"; depends=[ggplot2 gtools reshape2 yesno zoo]; };
   muhaz = derive2 { name="muhaz"; version="1.2.6"; sha256="1b7gzygbb5qss0sf9kdwp7rnj8iz58yq9267n9ffqsl9gwiwa1b7"; depends=[survival]; };
   muir = derive2 { name="muir"; version="0.1.0"; sha256="0h3qaqf549v40ms7c851sspaxzidmdpcj89ycdmfp94b2q3bmz98"; depends=[DiagrammeR dplyr stringr]; };
   multcomp = derive2 { name="multcomp"; version="1.4-8"; sha256="0fm78g4zjc6ank316qfw977864shmy890znn4fahwc8jjdhpc252"; depends=[codetools mvtnorm sandwich survival TH_data]; };
@@ -8296,17 +8465,19 @@ in with self; {
   multdyn = derive2 { name="multdyn"; version="1.6"; sha256="06yab2lmxp7lc7zjk8n194mn5vza0yjbp276iair3ry35my4h3v8"; depends=[data_table ggplot2 Rcpp RcppArmadillo reshape2]; };
   multfisher = derive2 { name="multfisher"; version="1.0"; sha256="1pc3f6f87n29cb4caszp4arpy33pc3a0iwmrqinhyw66xjnqm8qp"; depends=[]; };
   multgee = derive2 { name="multgee"; version="1.6.0"; sha256="17qrfvxxapqzjy2ps7kk9k9hkmb9zdxflwclyagp1amgv50la49f"; depends=[gnm VGAM]; };
-  multiApply = derive2 { name="multiApply"; version="0.0.1"; sha256="1hgvvi00297rri9k5mnz7kmzpf1yxjmj153wwx4a68wv2mf9sx44"; depends=[abind doParallel foreach future plyr]; };
+  multiApply = derive2 { name="multiApply"; version="1.0.0"; sha256="1hlrh5v52ym226dg4by0hxbkbpv4qsmmbaraxiyywsmwh3nx2fw8"; depends=[abind doParallel foreach plyr]; };
   multiAssetOptions = derive2 { name="multiAssetOptions"; version="0.1-1"; sha256="1kb4qxyl9shvrpqfxq26lhh3sssmyjcnhhcl6gcbb0s86snh9ms9"; depends=[Matrix]; };
   multiCA = derive2 { name="multiCA"; version="1.1"; sha256="1vgb13cfq10g8hxykgi3is3mrlbm76vh40cznapl7xxmw226ccrl"; depends=[bitops multcomp]; };
   multiDimBio = derive2 { name="multiDimBio"; version="1.1.1"; sha256="0b0lymnli7w91bfd67dsvzbj3flxsrsmbg4a18mzch0j9y6a40x0"; depends=[ggplot2 gridGraphics lme4 MASS misc3d pcaMethods RColorBrewer]; };
   multiPIM = derive2 { name="multiPIM"; version="1.4-3"; sha256="0j7d0cgs8zcyiyibzmfhcandad76sf4gm57wkcv98bf96wkls58l"; depends=[lars penalized polspline rpart]; };
+  multiROC = derive2 { name="multiROC"; version="1.0.0"; sha256="0zb52g1s4km7gs6krmn3k76p4qywx4bjakfr5gs4s4x7ki3w3x43"; depends=[boot ggplot2 magrittr]; };
   multiband = derive2 { name="multiband"; version="0.1.0"; sha256="1f4gmy0yf9zid7kl05zncvvig6hs4nl1h9wkrkc24rxx9risw9k9"; depends=[]; };
   multibiplotGUI = derive2 { name="multibiplotGUI"; version="1.0"; sha256="0ig7r4p8mq594cjwclbqwjk8saqkvjqjbbnnxj1hc1sdj7qdlcpf"; depends=[cluster dendroextras Matrix rgl shapes tcltk2 tkrplot]; };
   multichull = derive2 { name="multichull"; version="1.0.0"; sha256="1gc7kxxlbanc6rmmbf6h85jf7kj0a78h23m5vwwqqliv018qsv2n"; depends=[igraph plotly shiny shinythemes]; };
   multicmp = derive2 { name="multicmp"; version="1.0"; sha256="0cdb1jshrkx1n9a8p4xsa11n3z9g27qcibbc6wz3jcjykdqlwi0r"; depends=[numDeriv]; };
   multicon = derive2 { name="multicon"; version="1.6"; sha256="16glkgnm4vlpxkhf1xw1gl1q10yavx9479i21v29lldag35z8pqx"; depends=[abind foreach mvtnorm psych sciplot]; };
   multicool = derive2 { name="multicool"; version="0.1-10"; sha256="1ybg9piya9psqg42w9i3zsnavbxhkfklfwl7cb420i5nkq6wpc2v"; depends=[Rcpp]; };
+  multifluo = derive2 { name="multifluo"; version="1.0"; sha256="1blmr2cdbdwfyivvla0nmv2n44m168f3d11g5i7vydh8fl17l8vr"; depends=[ellipse imager]; };
   multifwf = derive2 { name="multifwf"; version="0.2.2"; sha256="1l6z3pzz6g6w1spp1f918jh6w0jm93qyc882rj8jhn1198d2s8nd"; depends=[]; };
   multigraph = derive2 { name="multigraph"; version="0.75"; sha256="0y4ibyy7v5hgxilrw5fxhj12597yl9q8zla5xvvhn9g7ir6xvmxd"; depends=[multiplex]; };
   multigroup = derive2 { name="multigroup"; version="0.4.4"; sha256="1r79zapziz3jkd654bwsc5g0rphrk9hkp1fpik8jvjsa1cix40mq"; depends=[MASS]; };
@@ -8317,20 +8488,21 @@ in with self; {
   multimode = derive2 { name="multimode"; version="1.0"; sha256="00cv1h3qrk1wgkvq69kqis0jb3yhpcsrww80y6gh8ziyr6kcwx1f"; depends=[diptest ks rootSolve]; };
   multinbmod = derive2 { name="multinbmod"; version="1.0"; sha256="1c4jyzlcjkqdafj9b6hrqp6zs33q6qnp3wb3d7ldlij7ns9fhg71"; depends=[]; };
   multinet = derive2 { name="multinet"; version="1.1.1"; sha256="13f7gqf45ydnyiv36gwcrc8mgv5gy61fak0in7f8bss4bvfldbxx"; depends=[igraph Rcpp]; };
-  multinets = derive2 { name="multinets"; version="0.1.0"; sha256="1581bafyxrvy7yk51alni57fjv6hmljdb572wj6jfqa7fm6j4g7p"; depends=[igraph]; };
+  multinets = derive2 { name="multinets"; version="0.2.0"; sha256="05m0xin8wxshmwb3b9cgsvi8037wvmirbyyim1xxx2ppfwrdr2a6"; depends=[igraph Rcpp]; };
   multinomRob = derive2 { name="multinomRob"; version="1.8-6.1"; sha256="1fdjfk77a79fy7jczhpd2jlbyj6dyscl1w95g64jwxiq4hsix9s6"; depends=[MASS mvtnorm rgenoud]; };
-  multipanelfigure = derive2 { name="multipanelfigure"; version="0.10.5"; sha256="0am4vi8mwbrvg6lmh53xp70mwi0klkpd11bd262kcfz125hbjy7n"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_types caTools ggplot2 gridGraphics gtable jpeg magrittr png rsvg tiff]; };
+  multipanelfigure = derive2 { name="multipanelfigure"; version="0.10.6"; sha256="1v53fanbnyba3f1ymgxr6q8yy1g5ax49z9ig1bxk3qywpixl8yh3"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_types caTools ggplot2 gridGraphics gtable jpeg magrittr png rsvg tiff]; };
   multipleNCC = derive2 { name="multipleNCC"; version="1.2-1"; sha256="080wpyifpw41p6jip2ia7439jdhzyb7lbhs2qzzg0hn6c0qq7mrr"; depends=[mgcv survival]; };
-  multiplex = derive2 { name="multiplex"; version="2.7"; sha256="1da28sb2rsnhs3bisgc4npjky3v1rssqh4jb0l51p50p665b5sjz"; depends=[]; };
+  multiplex = derive2 { name="multiplex"; version="2.8"; sha256="01l3kmvsrrq0c98dv5m25yjjcbc99in6dv9k5h54cyjsw4jsjhns"; depends=[]; };
   multiplyr = derive2 { name="multiplyr"; version="0.1.1"; sha256="0bsf2zhzqwl3skg26fm27j2wpifky0mph26acrlq8p72njkbcw4d"; depends=[bigmemory bigmemory_sri magrittr]; };
   multipol = derive2 { name="multipol"; version="1.0-6"; sha256="1yjz0p4mcgzs98s61i8315wyhh986jxp8b0lq66375ckpr2ddcss"; depends=[abind]; };
   multirich = derive2 { name="multirich"; version="2.1.1"; sha256="04jr5jvds70j2psyxz12d2my61jcj5hvdyv10pvar2rpqaw0yxyh"; depends=[]; };
+  multiselect = derive2 { name="multiselect"; version="0.1.0"; sha256="1cda38zq7c1r56wdfpr5dg0jfw4kzi9p7jq59qm04j461j9ag3q6"; depends=[Hmisc]; };
   multisensi = derive2 { name="multisensi"; version="2.1"; sha256="17c1cddgzkgd583fh31wfjahpl5iv1casfs1aja000rqq1x2kfqm"; depends=[knitr sensitivity]; };
   multisom = derive2 { name="multisom"; version="1.3"; sha256="0msxmrj4iawxg4vf4r7kj26zalxz4di2w4nxgxiakiig4g4ggy9z"; depends=[class kohonen]; };
   multispatialCCM = derive2 { name="multispatialCCM"; version="1.0"; sha256="1fzd91w10iln8qb81z240lq3fi4gq22l4rh9npkav6fiq6g6rlp8"; depends=[]; };
   multistate = derive2 { name="multistate"; version="0.2"; sha256="0jdgyzc99k4py39g98c4dlcdl918568ihcyhb7csxbsn1zn1qm9l"; depends=[date relsurv statmod survival]; };
   multitaper = derive2 { name="multitaper"; version="1.0-14"; sha256="04wd9bbhyx7697pfy0fpj02v1csr48hkpqj62h9p8a6w84ji4k68"; depends=[]; };
-  multivariance = derive2 { name="multivariance"; version="1.0.5"; sha256="1xlyz46q8prywi5kycfcsddhjf5fa0x27ri8yd82nfkl4cgjsc1s"; depends=[]; };
+  multivariance = derive2 { name="multivariance"; version="1.1.0"; sha256="1yl1qfckpf98j4ca3wv8zw8vd79isaqvq7qkakyhxy0ljx20jmlk"; depends=[abind igraph]; };
   multivator = derive2 { name="multivator"; version="1.1-9"; sha256="0vbqvhmym46zjr1h4s53sjrddfjpv8wi0sq4lrh2rmqarq068416"; depends=[emulator mvtnorm]; };
   multiwave = derive2 { name="multiwave"; version="1.2"; sha256="1bw071izjxrsk5gx8s49nrlryabpgpg7k2z1ghmk8p6i9m5apnl8"; depends=[]; };
   multiway = derive2 { name="multiway"; version="1.0-4"; sha256="0gzsxcmavyrsrkmiq7yr0jmxbyk91h9kk9w2gazqxddk2c8q4g2s"; depends=[quadprog]; };
@@ -8345,8 +8517,8 @@ in with self; {
   musica = derive2 { name="musica"; version="0.1.3"; sha256="0cfzfar706l0xdb0n11m18mayj5rrplvf4qry36vgxsiaxcba90r"; depends=[data_table lubridate magrittr qmap]; };
   mut = derive2 { name="mut"; version="1.1"; sha256="0v0vviarsmaiap3fa82ia01cblana65fd3cbj7jkd3aral6pm6yz"; depends=[expm Familias IBDsim paramlink]; };
   mutSignatures = derive2 { name="mutSignatures"; version="1.2"; sha256="1kbp221lm43a5wiw754yjkd3qidmca20m0i8jlxsqk8ijbp40ky2"; depends=[cluster doParallel foreach ggplot2 pracma proxy]; };
-  mutoss = derive2 { name="mutoss"; version="0.1-10"; sha256="1pijr3admnciiwdgxbdac4352m7h08jyvpj7vdd27yx07wp2rri3"; depends=[multcomp multtest mvtnorm plotrix]; };
-  mutossGUI = derive2 { name="mutossGUI"; version="0.1-10"; sha256="16fgmpnym9nhiywqimjgv10swrvs3whp0nlzsw573vv0k6qjmwd2"; depends=[CommonJavaJars JavaGD JGR multcomp mutoss plotrix rJava]; };
+  mutoss = derive2 { name="mutoss"; version="0.1-12"; sha256="1yk7p7pb2xm38d3j19ysgwmix48lvimbhkhjjwk5jmr1a0ysx298"; depends=[multcomp multtest mvtnorm plotrix]; };
+  mutossGUI = derive2 { name="mutossGUI"; version="0.1-11"; sha256="08pcca9gzns83az6jbjzv4xhm1wgmchhzz4f54x1aq0nmvsz3qq1"; depends=[CommonJavaJars JavaGD JGR multcomp mutoss plotrix rJava]; };
   mvLSW = derive2 { name="mvLSW"; version="1.2.1"; sha256="012p828pyzz6xnv2akax5hx79v522dg4a2gqrjss526qylpg5j9l"; depends=[fields wavethresh xts zoo]; };
   mvMORPH = derive2 { name="mvMORPH"; version="1.0.9"; sha256="09368vgyb1s18awfr07hs1s40n2h15hy08fmir3ayhdfrdain4k6"; depends=[ape corpcor phytools spam subplex]; };
   mvMonitoring = derive2 { name="mvMonitoring"; version="0.1.0"; sha256="03nvq8nmrmrpzyxlsqzww5ghk640115l1jgmgwfahhjxkdpkzfxx"; depends=[BMS dplyr lazyeval plyr rlang robustbase xts zoo]; };
@@ -8355,7 +8527,7 @@ in with self; {
   mvQuad = derive2 { name="mvQuad"; version="1.0-6"; sha256="016477dhjdkqiadc631vzpbp967mn4yli6by3s1k348mlfirwsi3"; depends=[data_table statmod]; };
   mvSLOUCH = derive2 { name="mvSLOUCH"; version="1.3.3"; sha256="18gnxs1cx4f7r3m2vgrkmm41vwkamk9mn5hcgjacv2adl0ihnagd"; depends=[ape corpcor mvtnorm numDeriv ouch]; };
   mvShapiroTest = derive2 { name="mvShapiroTest"; version="1.0"; sha256="0zcv5l28gwipkmymk12l4wcj9v047pr8k8q5avljdrs2a37f74v1"; depends=[]; };
-  mvabund = derive2 { name="mvabund"; version="3.12.3"; sha256="1lk1kqglj7czbq38714dwlbhnhazba8clbg9s1pmrakh5b2gkvz7"; depends=[MASS Rcpp RcppGSL statmod tweedie]; };
+  mvabund = derive2 { name="mvabund"; version="3.13.1"; sha256="1z8bj9zbc8h7w1xki9sc2p2rq6lv8gbcmiy9819z54d7lx1i9cnj"; depends=[MASS Rcpp RcppGSL statmod tweedie]; };
   mvbutils = derive2 { name="mvbutils"; version="2.7.4.1"; sha256="1vs97yia78xh35sdfv5pj3ddqmy83qgamvyyh9gjg0vdznqhffzg"; depends=[]; };
   mvc = derive2 { name="mvc"; version="1.3"; sha256="0kmh6vp7c2y9jf71f4a29b0fxcl0h7m4p8wig4dk3fi7alhjf7ym"; depends=[rattle]; };
   mvcluster = derive2 { name="mvcluster"; version="1.0"; sha256="0yfl31scdgsiljvpv1yxc5bwwzr6kbhpjwqh2kql7xf0m0hc1pr4"; depends=[Rcpp RcppArmadillo]; };
@@ -8368,20 +8540,20 @@ in with self; {
   mvmeta = derive2 { name="mvmeta"; version="0.4.7"; sha256="1yadaviq66wdfs0dipn6gxk7jqvzwzjdr8lkfggdsl4vyyi9pwip"; depends=[]; };
   mvnTest = derive2 { name="mvnTest"; version="1.1-0"; sha256="0p37skzpljzz19x1hwh2hbxqins19zkbz7nlgfws5pgp9apazafq"; depends=[MASS mvtnorm]; };
   mvna = derive2 { name="mvna"; version="2.0.1"; sha256="10i42hjm5bk62c20pmxhya283yzw1902ivkflmyqy79jri266dxf"; depends=[lattice]; };
-  mvnfast = derive2 { name="mvnfast"; version="0.2.2"; sha256="1b548cl6gf5vks90z7hf4nl5hbl5jb1r50vnpv1hsjv2qbn0k9hr"; depends=[BH Rcpp RcppArmadillo]; };
+  mvnfast = derive2 { name="mvnfast"; version="0.2.5"; sha256="122zjzr0v4943cax10lp6flwfv479mncvalaj09kb173s5rgmf91"; depends=[BH Rcpp RcppArmadillo]; };
   mvngGrAd = derive2 { name="mvngGrAd"; version="0.1.5"; sha256="0ir4pakfb2jq84rbfqix6rph8q6cgadjdn49rrdl4439b8hlsg8k"; depends=[]; };
   mvnmle = derive2 { name="mvnmle"; version="0.1-11"; sha256="02mpmrr22cqb3v8x7kydgg715yl3lrdgzgdqpchmp0xrl2db8gq4"; depends=[]; };
   mvnormtest = derive2 { name="mvnormtest"; version="0.1-9"; sha256="1iaxjwp7bgxhaa4xqvgqb61316mq2fb0452d0pabhmbxkvmvdnj6"; depends=[]; };
   mvnpermute = derive2 { name="mvnpermute"; version="1.0.0"; sha256="0mbyj5i5vysrnl3pgypl0cjf3sylsvzfl1pcxkn0q16560vqh2ba"; depends=[]; };
-  mvord = derive2 { name="mvord"; version="0.2.0"; sha256="19g91rv9f5isx8x8pbx7n2chdqdf2drp19b5dhrf3ibx4fq3ai8m"; depends=[MASS Matrix mnormt numDeriv optimx pbivnorm]; };
-  mvoutlier = derive2 { name="mvoutlier"; version="2.0.8"; sha256="07a2pv8bw5k0faiy0skdchg7c0n236saq5d8plqq7234n3rjl8pg"; depends=[robCompositions robustbase sgeostat]; };
+  mvord = derive2 { name="mvord"; version="0.2.1"; sha256="1s9b1lcgfbz333mq6bhqfi9753mhgf3hl5mrakzw2i0inmhjr9mx"; depends=[MASS Matrix mnormt numDeriv optimx pbivnorm]; };
+  mvoutlier = derive2 { name="mvoutlier"; version="2.0.9"; sha256="1d562h3xicq962h27fi95qhrz9vkwxk0p8axhps1cy4b49w4bygi"; depends=[robCompositions robustbase sgeostat]; };
   mvprpb = derive2 { name="mvprpb"; version="1.0.4"; sha256="1kcjynz9s7vrvcgjb9sbqv7g50yiymbpkpg6ci34wznd33f7nrxm"; depends=[]; };
   mvrtn = derive2 { name="mvrtn"; version="1.0"; sha256="0k0k76wk5zq0cjydncsrb60rdhmb58mlf7zhclhaqmli1cy697k8"; depends=[]; };
   mvsf = derive2 { name="mvsf"; version="1.0"; sha256="1krvsxvj38c5ndvnsd1m18fkqld748kn5j2jbgdr3ca9m3i5nlwf"; depends=[mvnormtest nortest]; };
   mvst = derive2 { name="mvst"; version="1.0.1"; sha256="0sv8pd1524pr3xpxplq468dxfd0wipdr41awqwvcljpw5wgl34qa"; depends=[MCMCpack mnormt mvtnorm]; };
   mvtboost = derive2 { name="mvtboost"; version="0.5.0"; sha256="06zgx1c2470bh3x6s2awzkxbyij6bvzv23xbvamg77v5pz5bjj6h"; depends=[gbm RColorBrewer]; };
   mvtmeta = derive2 { name="mvtmeta"; version="1.0"; sha256="0g0d4lrz854wkd0dz5aiad54i46aqkfhsq6cpbsfv0w5l2kwiqqz"; depends=[gtools]; };
-  mvtnorm = derive2 { name="mvtnorm"; version="1.0-6"; sha256="0i74s9dl4jf1gln6agra8h38qn9ifd5v0gi13caj1da5nrbmn0aa"; depends=[]; };
+  mvtnorm = derive2 { name="mvtnorm"; version="1.0-7"; sha256="0f7hzflygdnbwvzadr3knhybhanwg7agqddclj6mhbvwqpgb0qyh"; depends=[]; };
   mvtsplot = derive2 { name="mvtsplot"; version="1.0-1"; sha256="0g5grrha77rsnkfasw5pxnpmkl7vgb728ms8apyg8xnbmgilg9vv"; depends=[RColorBrewer]; };
   mwa = derive2 { name="mwa"; version="0.4.1"; sha256="0bd4i1zzwmcsrm2bg14f528yav5hb6qxcd7x4i5rwdcx1hlx27bw"; depends=[cem MASS rJava]; };
   mwaved = derive2 { name="mwaved"; version="1.1.5"; sha256="1hb7y42fy26pv6cf235g4xx1vyvwx7chwryi7phjd2aavxffj18z"; depends=[Rcpp shiny]; };
@@ -8393,22 +8565,22 @@ in with self; {
   mztwinreg = derive2 { name="mztwinreg"; version="1.0-1"; sha256="1rg6ikaqdrc7q44s3r3km8h45prnvcpzpxd7nxbmh209iz9j19ai"; depends=[mclogit rms]; };
   n1qn1 = derive2 { name="n1qn1"; version="6.0.0-1"; sha256="01bci81lhanxpfl454gl09krgb4229dnq9f34bngwm8ygvdadfgy"; depends=[Rcpp RcppArmadillo]; };
   nCDunnett = derive2 { name="nCDunnett"; version="1.1.0"; sha256="0q2db1pixqr0wbx4bd05c98i1p0vgaqsfa1iwjxr08c62a5xhkks"; depends=[]; };
-  nCal = derive2 { name="nCal"; version="2016.7-31"; sha256="12zj22myfxqxyq7bl669ngyk6yb3i9gsg00qqw5a5x2w95imwv20"; depends=[drc gdata gWidgets kyotil]; };
+  nCal = derive2 { name="nCal"; version="2017.12-3"; sha256="1k03zrf67il7miap81r2fdnsi15i98wmwc3a8zxn54qfr2w9pcy6"; depends=[drc gdata gWidgets kyotil]; };
   nFCA = derive2 { name="nFCA"; version="0.3"; sha256="1jyyzagmppm3i7vh3ia4ic0zql1w04f66z81v0zpdihd4cbl5ra7"; depends=[]; };
   nFactors = derive2 { name="nFactors"; version="2.3.3"; sha256="016d76yfxz7gx7zz5dgwjmj2c5m6kxdmqj0lln5w6d70r9g1kxg7"; depends=[boot lattice MASS psych]; };
   nLTT = derive2 { name="nLTT"; version="1.3.1"; sha256="1wha26lcgk2kw48vyiws1ciyp8x6d7nmkrahh5b8w23ns6bqpngf"; depends=[ape coda deSolve]; };
+  na_tools = derive2 { name="na.tools"; version="0.2.1"; sha256="1fdbrf97mvak44vzarwqr4w6cs6msr42zcfxl2ci3i67nlgsv4pl"; depends=[]; };
   nabor = derive2 { name="nabor"; version="0.4.7"; sha256="16dxnvq6yxlrignzvxjdwzwm32fn2a8bsjqjsg5qz94ir7g3pzm6"; depends=[BH Rcpp RcppEigen]; };
   nadiv = derive2 { name="nadiv"; version="2.14.3.1"; sha256="08276bakyrn9d9vh08yzan60kigsihwfhgx788gwp6pk8v6m25wa"; depends=[Matrix]; };
-  naivebayes = derive2 { name="naivebayes"; version="0.9.1"; sha256="051mg1idim75k181v4n8s5rji94rwy9c75yjkavjhr4brhizqy8f"; depends=[]; };
+  naivebayes = derive2 { name="naivebayes"; version="0.9.2"; sha256="0xmgcvvhfh7v8afi8fywaldawbx3s5hwgpvyyp2c9m6nrhw1kknl"; depends=[]; };
   namedCapture = derive2 { name="namedCapture"; version="2017.06.01"; sha256="14zimn3wbavbkwra8vfmqdm1q5bmlmsbg0b29cjly5dd4zlfzzb0"; depends=[]; };
   namespace = derive2 { name="namespace"; version="0.9.1"; sha256="1bsx5q19l7m3q2qys87izvq06zgb22b7hqblx0spkvzgiiwlq236"; depends=[]; };
-  nandb = derive2 { name="nandb"; version="0.2.1"; sha256="18xk1xk77a14n9dvwrhqihagiblawgacyicx37vbza01b4x502c5"; depends=[abind autothresholdr BH BiocParallel DescTools dplyr EBImage filesstrings ggplot2 hexbin magrittr matrixStats ore purrr R_utils Rcpp RcppRoll readr reshape2 RSAGA stringr tibble viridis]; };
-  naniar = derive2 { name="naniar"; version="0.1.0"; sha256="036izabfxc5mni7brxk0ksijypwq6hbbrib980z90i3zixgqjh1b"; depends=[dplyr forcats ggplot2 magrittr purrr purrrlyr rlang tibble tidyr viridis visdat]; };
+  naniar = derive2 { name="naniar"; version="0.2.0"; sha256="04r3yfv6sv1yrwl4vasn5nxr0bn6fwdjk2zyx4p7vy8kfcw24300"; depends=[dplyr forcats ggplot2 glue magrittr purrr purrrlyr rlang tibble tidyr viridis visdat]; };
   nanop = derive2 { name="nanop"; version="2.0-6"; sha256="007gdc93pk0vpfmsw7zgfma2k1045n2cxwwsyy276smy0ys9fdhp"; depends=[distrEx rgl]; };
   nanotime = derive2 { name="nanotime"; version="0.2.0"; sha256="138qz844sczgzzl8vn5079590hnq96w7jdbn851cpw64gmq21r4w"; depends=[bit64 RcppCCTZ zoo]; };
   naptime = derive2 { name="naptime"; version="1.3.0"; sha256="1cadfv5sdsmz61kf96hf2gbnghf24q40g5c3h9b8prvkxslap691"; depends=[lubridate]; };
-  nardl = derive2 { name="nardl"; version="0.1.0"; sha256="0rd4a9diz5mv7ra2c8d60yl407i8bnkxz2dq5iz02c6vm94j322v"; depends=[car]; };
-  narray = derive2 { name="narray"; version="0.3.2"; sha256="1x6fl1z19cvh15czb8mncpnz9p61djmc6khv8wb207krwfixaq5x"; depends=[abind pryr reshape2 stringr]; };
+  nardl = derive2 { name="nardl"; version="0.1.2"; sha256="16qac9qgmv96iwsr5xbg24x4a1livpjb9qmfd0i8m3nv6858c7ah"; depends=[car Formula lmtest matlab strucchange tseries]; };
+  narray = derive2 { name="narray"; version="0.4.0"; sha256="0cr0y8mqwprxk0bv9160xvqxgvqkihn3avzsjm6ccivvb8zlkqxv"; depends=[reshape2 stringr]; };
   nasadata = derive2 { name="nasadata"; version="0.9.0"; sha256="0y88qdy8c1y0prsajxic5vdqfixv9knjsbhw3vbfac8wv3a69bjl"; depends=[dplyr jsonlite plyr png]; };
   nasaweather = derive2 { name="nasaweather"; version="0.1"; sha256="05pqrsf2vmkzc7l4jvvqbi8wf9f46854y73q2gilag62s85vm9xb"; depends=[]; };
   nat = derive2 { name="nat"; version="1.8.11"; sha256="1s5hbi1b20jq0qv4px0zrwsivhi2mdlqbwx4lv55mdhj447rxk1x"; depends=[digest filehash igraph nabor nat_utils plyr rgl yaml]; };
@@ -8416,6 +8588,7 @@ in with self; {
   nat_templatebrains = derive2 { name="nat.templatebrains"; version="0.8.2"; sha256="09kyi4p28n8dgw8jpv00vh9vl6nqmmgqfriwkicx8yyq65vh6fxk"; depends=[digest igraph memoise nat rappdirs rgl]; };
   nat_utils = derive2 { name="nat.utils"; version="0.5.1"; sha256="12g87ar795xfbz7wljksb24x9hqvcirjr50y4mbpx1427r0l7clv"; depends=[]; };
   natserv = derive2 { name="natserv"; version="0.1.4"; sha256="0qwf7lapx5gchk8xmdnmxr10j5dnkp52mqnh1ja216z7l841cl07"; depends=[crul data_table tibble xml2]; };
+  natural = derive2 { name="natural"; version="0.9.0"; sha256="0zxwbf3gg2h0bhl2w0md3rd162vlsgg0dv3187hc0ax7333cc4cx"; depends=[glmnet Matrix]; };
   naturalsort = derive2 { name="naturalsort"; version="0.1.3"; sha256="0mz801y9mzld9ypp3xmsjw2d8l9q97sdnv09wrci9xi3yg2sjf6d"; depends=[]; };
   nauf = derive2 { name="nauf"; version="1.1.0"; sha256="1c7g7qjd77lcx2nghw1mxp60q7sc2hjdr4drjkypzyqs8q3q97rm"; depends=[bayesplot car digest lme4 lmerTest loo lsmeans MASS Matrix pbkrtest Rcpp rstan rstanarm shinystan standardize stringr]; };
   nbc4va = derive2 { name="nbc4va"; version="1.0"; sha256="0y1qpkzjr327qyvmqf129m400rvn6gwk72ccnly6cqq53icrarn4"; depends=[]; };
@@ -8430,71 +8603,76 @@ in with self; {
   ncdump = derive2 { name="ncdump"; version="0.0.3"; sha256="09g98mzpky32z41jf23ahzhyv34l34y1gqq99j2hl4pqlvvhxs9i"; depends=[dplyr ncdf4]; };
   ncf = derive2 { name="ncf"; version="1.1-7"; sha256="0r3xhpinkcnkzc855q8ddd889v12snx4n1g8jyw9cnmrki8n2hxh"; depends=[]; };
   ncg = derive2 { name="ncg"; version="0.1.1"; sha256="1jzkzp61cc5jxmdnl867lcrjjm7y2iw9imzprbd098p1j3w8fvj7"; depends=[]; };
+  ncmeta = derive2 { name="ncmeta"; version="0.0.2"; sha256="1qr0zfyy8g3zrmvg6i6b7sfvl3lavr391rqgf6pqhslg7i9cgpiz"; depends=[dplyr rlang RNetCDF tibble]; };
   ncvreg = derive2 { name="ncvreg"; version="3.9-1"; sha256="1v71r2k25n28lhpqsgzaaw48w1gwn0yjbir64hx5lchdbvd5k1j3"; depends=[]; };
   ndjson = derive2 { name="ndjson"; version="0.5.0"; sha256="1ivwr9wm45ivk4jcc39hgqsyhilpisyhccks093iisx51vhxjjl0"; depends=[data_table dplyr dtplyr Rcpp]; };
   ndl = derive2 { name="ndl"; version="0.2.17"; sha256="08h01rw7gsa31zp91q2rsw1ba9yf0fyhz3w8s9xq5788qwc80280"; depends=[Hmisc MASS Rcpp]; };
   ndtv = derive2 { name="ndtv"; version="0.10.0"; sha256="1j4g5qclfbw7fkykaclrsb2d70vy40fd1rgr1n73qyrkx0fyym44"; depends=[animation base64 jsonlite MASS network networkDynamic sna statnet_common]; };
   nearfar = derive2 { name="nearfar"; version="1.1"; sha256="0i2nc1b4vslgjj29x5q24yxv9l3i0g5hcrbm9xy1b3039n70cwix"; depends=[car GenSA MASS nbpMatching]; };
   neariso = derive2 { name="neariso"; version="1.0"; sha256="1npfd5g5xqjpsm5hvhwy7y84sj5lqw9yzbnxk6aqi80gfxhfml4c"; depends=[]; };
-  neat = derive2 { name="neat"; version="1.1.1"; sha256="12q9g8b0cf9j9cp0xc4h4bs4jv251arq9pf7c2hqgvirgr10ni2g"; depends=[igraph]; };
-  neatmaps = derive2 { name="neatmaps"; version="1.0.6"; sha256="0n12dkk5vm1y3pnxrzsym6d5mwk4xzcs3glblbldhymvs1vlsgqw"; depends=[dendextend ggplot2 heatmaply igraph pvclust]; };
+  neat = derive2 { name="neat"; version="1.1.2"; sha256="13y81cnf3j1cncfr5ii3xbk2k11yi3wqgr54dlfzyfzlah26zp5p"; depends=[igraph]; };
+  neatmaps = derive2 { name="neatmaps"; version="1.0.7"; sha256="07nr8c5i1s3sba4l2123vb50b1cgn1qjdckwmyjwwai1yb3smkag"; depends=[dendextend ggplot2 heatmaply igraph pvclust]; };
   needs = derive2 { name="needs"; version="0.0.3"; sha256="16dkjpijz3rz7kd5ggxsdg55iwd42nll1vk6g5ix4xdbqrx6cp9x"; depends=[]; };
   needy = derive2 { name="needy"; version="0.2"; sha256="1ixgpnwrg6ph1n5vy91qhl1mqirli9586nzkmfvzjrhdvrm0j5l0"; depends=[]; };
   negenes = derive2 { name="negenes"; version="1.0-5"; sha256="0fdhc0v0b820wfg3sypvya7zhg7mhfmdbfiwn1lj3a2xg01zvc2n"; depends=[]; };
   neighbr = derive2 { name="neighbr"; version="1.0"; sha256="0612nzpryj4xp0ncpvpn56x5n9ammzjp3ysq1rj1fc84h0p7nml3"; depends=[]; };
-  neldermead = derive2 { name="neldermead"; version="1.0-10"; sha256="1snavf90yb12sydic7br749njbnfr0k7kk20fy677mg648sf73di"; depends=[optimbase optimsimplex]; };
+  neldermead = derive2 { name="neldermead"; version="1.0-11"; sha256="0gf9rfwz48sadl6960mpfb6a3l9n5p28yq3n0a9vz8mr57vh1dzg"; depends=[optimbase optimsimplex]; };
   neotoma = derive2 { name="neotoma"; version="1.7.0"; sha256="0f4s5yw0yj4n8lkvbl2l3ivdclg9pknyss7qhppp85rdxzwxilpq"; depends=[analogue httr jsonlite leaflet plyr reshape2 xml2]; };
   nephro = derive2 { name="nephro"; version="1.2"; sha256="1izmzx8lah322xzb42asfnrvr2c9yqd0zf7fmrhwd3p4rr1rqa7d"; depends=[]; };
   nesRdata = derive2 { name="nesRdata"; version="0.1.0"; sha256="1h33hql0vgkr2ps1ysisdxxb0cnm18mh8sbd3fxy9xf42icwfwdb"; depends=[dataone dplyr purrr rappdirs readr]; };
   nestedRanksTest = derive2 { name="nestedRanksTest"; version="0.2"; sha256="0r08jp8036cz2dl1mjf4qvv5qdcvsrad3cwj88x31xx35c4dnjgj"; depends=[]; };
   net_security = derive2 { name="net.security"; version="0.3.0"; sha256="15vvcmakl9hl1srdhjf73g2bwwcxn93220i4gv0rcsw5732mjanz"; depends=[data_table dplyr jsonlite plyr R_utils stringr XML]; };
-  netCoin = derive2 { name="netCoin"; version="0.2.6"; sha256="0vg1kqkgqb93n5mdq1ivf4nals7iffdkdxccj5m54bvm2j65028l"; depends=[igraph Matrix]; };
+  netCoin = derive2 { name="netCoin"; version="0.2.7"; sha256="0dzncn72zl3yp2gds7vmjk5j82rb80j03ivkf74b0z5s4ckxhc9b"; depends=[haven igraph Matrix]; };
   netassoc = derive2 { name="netassoc"; version="0.6.3"; sha256="1hyshnbpq60a3y13b4sh1c2rk78x09q01b7q6xrgv10w7bn9r2sg"; depends=[corpcor huge igraph infotheo vegan]; };
   netcoh = derive2 { name="netcoh"; version="0.2"; sha256="0q60hvyparlwdww6as6hcdzfs6q3n8z1rfpj53r5q2s77x6q07xx"; depends=[Matrix Rcpp RcppArmadillo]; };
   netcom = derive2 { name="netcom"; version="1.0.4"; sha256="0fka14sffm0p1gldk27fd62ng05spfpbn665b4w5hdf1z4z0bs20"; depends=[clue expm igraph Matrix pdist pracma vegan]; };
   netdiffuseR = derive2 { name="netdiffuseR"; version="1.19.0"; sha256="0rnf7hf5vxpqw2rn00yqmkgpsx752pmfigyggbs4ikfbcsjq24sx"; depends=[boot igraph MASS MatchIt Matrix network networkDynamic Rcpp RcppArmadillo sna SparseM]; };
   netgen = derive2 { name="netgen"; version="1.3"; sha256="1iywpl9n1yplnd38dff8m9mz1vlfbvplw393grhpav5czcknj160"; depends=[BBmisc checkmate ggplot2 igraph lhs lpSolve mvtnorm stringr]; };
   netgsa = derive2 { name="netgsa"; version="3.0"; sha256="0cqyiilpxhdi6zmibn85y1aqwpcs1aialz34klakmllzn6kvdsng"; depends=[corpcor glasso glmnet igraph Matrix]; };
-  netmeta = derive2 { name="netmeta"; version="0.9-6"; sha256="077pwbyd1hj8mqhik410dpccyb6h605zrfw03sjynxvkhyf4pb5b"; depends=[magic MASS meta]; };
+  netgwas = derive2 { name="netgwas"; version="0.1.3.1"; sha256="1fgs7dr4dhrs4hmscazsyiq1nkkx1vvygmarmy7pyqhxzv13kdwg"; depends=[glasso huge igraph MASS Matrix RBGL tmvtnorm]; };
+  netmeta = derive2 { name="netmeta"; version="0.9-7"; sha256="0yi1x0dyi7kim2yz9qwsbdnx1k6k15nmv6wlaby9z9yl7p2ij3jq"; depends=[magic MASS meta]; };
+  netrankr = derive2 { name="netrankr"; version="0.2.0"; sha256="1y56y5wv95d7mmjf8rrwr7cs0k64h9a2qbpind4xp0kakpjihn7m"; depends=[igraph Rcpp RcppArmadillo]; };
   nets = derive2 { name="nets"; version="0.9"; sha256="1wcr0fj50w3rqxw0k9cb81c2psdkb0dwwwzrjvxv50hksbhyi8kn"; depends=[igraph]; };
   nettools = derive2 { name="nettools"; version="1.0.1"; sha256="13fw316r31g9cjlbyy9qfccsyagxb6pyvn5k32f166b7vj92mk1q"; depends=[combinat dtw igraph Matrix minerva minet rootSolve WGCNA]; };
   network = derive2 { name="network"; version="1.13.0"; sha256="11sg330xb7gcnl3f6lwhhjdabz6mk43828i2np635pqw4s4yl13s"; depends=[]; };
   networkD3 = derive2 { name="networkD3"; version="0.4"; sha256="02wxki67drppgfka1is1ykg1f2rxf0x0657c0crj7ipfy62jbf1k"; depends=[htmlwidgets igraph magrittr]; };
   networkDynamic = derive2 { name="networkDynamic"; version="0.9.0"; sha256="1949fbcw0gq8lsm6rx5d5mpj1y9k4rk2v0pmm1kxi5igi6yd8lg9"; depends=[network statnet_common]; };
   networkDynamicData = derive2 { name="networkDynamicData"; version="0.2.1"; sha256="176al8jp0gha6yzhyn5flmyackmmdnh1h8sasqrdcmba7ha7cya6"; depends=[network networkDynamic]; };
-  networkGen = derive2 { name="networkGen"; version="0.1.0"; sha256="0301a1vmkvnsiyii5hkmnqdw6gp8ipfqpvzgl7b5ca5fwhpad169"; depends=[igraph mgcv]; };
+  networkGen = derive2 { name="networkGen"; version="0.1.1"; sha256="1vnh5dajiaf47kx1sxyp744mlk3yvl4sxj380i3b3ic1wlgyd2h1"; depends=[igraph mgcv]; };
+  networkR = derive2 { name="networkR"; version="0.1.0-0"; sha256="1apgvnny2ynhnyn1a2kjiyvxrdqgkqar2w543wph4lnavsi4i0cp"; depends=[data_table fastmatch Matrix Rcpp RcppArmadillo]; };
   networkTomography = derive2 { name="networkTomography"; version="0.3"; sha256="1hd7av231zz0d2f9ql5p6c95k7dj62hp0shdfshmyfjh8900amw7"; depends=[coda igraph KFAS limSolve plyr Rglpk]; };
   networkreporting = derive2 { name="networkreporting"; version="0.1.1"; sha256="1ssbz8lw4mlwcblwfbyffvayvb2gmihq4qlz5q9222fn4aa3raxd"; depends=[dplyr functional ggplot2 lazyeval plyr reshape2 stringr surveybootstrap]; };
   networksis = derive2 { name="networksis"; version="2.1-3"; sha256="1kvil3qs7xd94ak9jgvj1nss55gjg0y7d35zmass9h1hjkcrq7bg"; depends=[network]; };
-  networktools = derive2 { name="networktools"; version="1.1.0"; sha256="1arfanladgnk6gkswd4hbhvycf5zz70v0cj8300qza7ksmmyvl7v"; depends=[devtools ggplot2 gridExtra igraph IsingFit NetworkComparisonTest nnet qgraph reshape2]; };
+  networktools = derive2 { name="networktools"; version="1.1.1"; sha256="1cfjhh0w5gs1v6d9q40bcjs658p308i20nybnqb8r7nkf77acxbg"; depends=[cocor devtools ggplot2 gridExtra igraph IsingFit NetworkComparisonTest nnet qgraph reshape2]; };
   neuRosim = derive2 { name="neuRosim"; version="0.2-12"; sha256="1hsnw9xipdr74fydq9013252ycbi9igh28s0j4dbdx52pv3iixzl"; depends=[deSolve]; };
   neural = derive2 { name="neural"; version="1.4.2.2"; sha256="05hrqgppgwp38rdzw86naglxj0bz3wqv04akq7f0jxbbjc6kwy4j"; depends=[]; };
   neuralnet = derive2 { name="neuralnet"; version="1.33"; sha256="14ga04mcd793v9a2584jb9l7n20kw00fgy3gayfwrkr1j39szdls"; depends=[MASS]; };
-  neurobase = derive2 { name="neurobase"; version="1.13.2"; sha256="1sv2kxahw123f6a7cl35n6dyz4ip8iifzk4dcp6jf8fnnnjyg8aq"; depends=[matrixStats oro_nifti R_utils RNifti]; };
+  neurobase = derive2 { name="neurobase"; version="1.26.1"; sha256="0fb2cvh3j650zjx7b60jfrvm5i7n3l98wis91bmyr9hx3qz24rj5"; depends=[abind matrixStats oro_nifti R_utils RNifti]; };
   neuroblastoma = derive2 { name="neuroblastoma"; version="1.0"; sha256="0hs87fvwaq53xxbh2dw3hjsmf1zkyqli9qyacxf72fnkyhhl8b45"; depends=[]; };
-  neurohcp = derive2 { name="neurohcp"; version="0.6"; sha256="0slk963rcrh5pyw1iv80dnh0a1yabkyvlvyshm2jwznp87r6lk3k"; depends=[base64enc digest httr xml2]; };
+  neurohcp = derive2 { name="neurohcp"; version="0.7.3"; sha256="0mz8aiyimw3vqkgm54mwfvnki5hg1j958r71fs1k213zn1cg9qqr"; depends=[base64enc digest httr xml2]; };
   neuroim = derive2 { name="neuroim"; version="0.0.6"; sha256="00cjr6pkip6zi2d0q3qbn3lb3k0z82v6c19qslvgpa9n0g63dr5p"; depends=[abind assertthat hash iterators Matrix Rcpp readr rgl stringr yaImpute]; };
   neuropsychology = derive2 { name="neuropsychology"; version="0.5.0"; sha256="0hlbjf8hxz4cl7fvg9mbyfmcyyxncc2nh9h1mrd2yzgrpgn0d0b5"; depends=[BayesFactor caret dplyr ggcorrplot ggplot2 Hmisc htmlTable lme4 MuMIn png ppcor psych stringi tidyr tidyverse tm wordcloud2]; };
+  neverhpfilter = derive2 { name="neverhpfilter"; version="0.2-0"; sha256="0m4gbqnjw2nmhf25svznlf6pd0b0mslk52lpirmlj1iv04w1aq1i"; depends=[xts zoo]; };
   ngram = derive2 { name="ngram"; version="3.0.4"; sha256="1q4y64dy7vcjikbfx20fpdiy1kwvxay4y90xr5j8d8zkqnva0way"; depends=[]; };
   ngramrr = derive2 { name="ngramrr"; version="0.2.0"; sha256="1p8s4p3h27g647rxx9qjfad5dzbngjbmvhw4gz0jbsmfqrsf72by"; depends=[tau tm]; };
-  ngspatial = derive2 { name="ngspatial"; version="1.2"; sha256="09sc67g7xyqzhmnzvnj6hhjkvkl3xzkwj1vi3idfl093g8m7x29v"; depends=[batchmeans Rcpp RcppArmadillo]; };
-  ngstk = derive2 { name="ngstk"; version="0.1.1.1"; sha256="0ns5z2lmzh314sqkxfjmxxx8kblfibsbpj2y37l7gf9wf2yd4684"; depends=[configr data_table stringr]; };
+  ngspatial = derive2 { name="ngspatial"; version="1.2-1"; sha256="1c65ws9b9s2grr44lqg8026c4p2875d0426dfmrakpb44mw2zppp"; depends=[batchmeans Rcpp RcppArmadillo]; };
+  ngstk = derive2 { name="ngstk"; version="0.2.1"; sha256="12zpl20i07d1f9navs9jjrialfh798wrfn1241j7s9h3rd6xi40l"; depends=[configr data_table stringr]; };
   nhanesA = derive2 { name="nhanesA"; version="0.6.4.3.3"; sha256="09mpxmk8w48hc14167jd2xifnj0kjz9h3h76bdnbb33wvhkn4jld"; depends=[Hmisc magrittr plyr rvest stringr xml2]; };
   nhlscrapr = derive2 { name="nhlscrapr"; version="1.8.1"; sha256="107k063279w9cy6in99rn03w2rq42ci8s6dvb9x6f9w7y3bdpvzn"; depends=[biglm bitops RCurl rjson]; };
   nhstplot = derive2 { name="nhstplot"; version="1.0.1"; sha256="1f07gfmbx80as54mlzdbs2z1vzc78rjy6i6m7zd4jplgcqdcynws"; depends=[ggplot2]; };
   nice = derive2 { name="nice"; version="0.4-1"; sha256="1p8vmimiq9sbjvbx6c2wqwwkpnzw4kkdvjry6qyadmm3frwhj5qb"; depends=[]; };
   nicheROVER = derive2 { name="nicheROVER"; version="1.0"; sha256="0sa7wfpzkin78vz48vwa5iac82v5l1s3zczdxz8sc2kyg22fj0aw"; depends=[mvtnorm]; };
   nima = derive2 { name="nima"; version="0.4.5"; sha256="1fllq76k4r07ymd58s865hgg3yrmwa34kr5mjd89n50mm1m110mh"; depends=[assertthat devtools ggplot2 ggthemes gridExtra gtools plyr ProjectTemplate scales survival]; };
-  nimble = derive2 { name="nimble"; version="0.6-8"; sha256="1mkqv6h6j4b1la3my6cwr20vjfmskbg286pr4phvg9gpp4f179b4"; depends=[coda igraph R6]; };
-  nipals = derive2 { name="nipals"; version="0.3"; sha256="0zghzh2isfahz9qy6fw12fp848l12h01lldq99ac2nqikk28nm1n"; depends=[]; };
+  nimble = derive2 { name="nimble"; version="0.6-9"; sha256="1lkf386qcgw5gr8cpxfh2ncrc9wj59icygi9m37c8077h3h0sj03"; depends=[coda igraph R6]; };
+  nipals = derive2 { name="nipals"; version="0.4"; sha256="0h9jxmj44x3lllxk1y2izkslafbiab175qrsxlnfcvhnaj13zsds"; depends=[]; };
   nivm = derive2 { name="nivm"; version="0.3"; sha256="111jkgirgsl1j36xgwi81wzwxial3vdw8mqzi1faldxxd9a2cixm"; depends=[bpcp ssanv]; };
   nlWaldTest = derive2 { name="nlWaldTest"; version="1.1.3"; sha256="1cppdz8qvigjdz4sgr1gm2j09zi407xxmryc28zc7ps7rvgy344h"; depends=[]; };
   nlcv = derive2 { name="nlcv"; version="0.3.2"; sha256="1lknlqd64p15lnkydbi7zx7lmhg1fdl750yjqjaccdjzrgrqvgkv"; depends=[a4Core Biobase e1071 ipred kernlab limma MASS MLInterfaces multtest pamr randomForest RColorBrewer ROCR xtable]; };
   nleqslv = derive2 { name="nleqslv"; version="3.3.1"; sha256="1n1sbp7436yd5g6v0060j2iwk4rppjq2pc5x47g9wlwnskdfgvl7"; depends=[]; };
-  nlme = derive2 { name="nlme"; version="3.1-131"; sha256="0k2nvdzhic6bzhfsbq6la6q6a1i5nlj4pnh6lpdxiiwvxdks3nkr"; depends=[lattice]; };
+  nlme = derive2 { name="nlme"; version="3.1-131.1"; sha256="1xafi670a9jzb52kqxkacxfmy0viac3aql5byfq86kgkgla2sg0y"; depends=[lattice]; };
   nlmeODE = derive2 { name="nlmeODE"; version="1.1"; sha256="1zp1p98mzbfxidl87yrj2i9m21zlfp622dfnmyg8f2pyijhhn0y2"; depends=[deSolve lattice nlme]; };
   nlmeU = derive2 { name="nlmeU"; version="0.70-3"; sha256="05kxymgybziiijpb17bhcd9aq4awmp5km67l2py9ypakivi0hc6l"; depends=[nlme]; };
-  nlmixr = derive2 { name="nlmixr"; version="0.9.0-1"; sha256="0alqi6c0x0cnycnqfqx7n2sgprcqlzzmzpcjhn71dz891ms5awh8"; depends=[BH brew dparser ggplot2 inline lattice lbfgs Matrix memoise minqa mvtnorm n1qn1 nlme numDeriv R_utils Rcpp RcppArmadillo RcppEigen rex RxODE StanHeaders]; };
+  nlmixr = derive2 { name="nlmixr"; version="0.9.0-3"; sha256="1fwnq0bnsqadadgy9i1083dz4zkidwdxm2ncy6jyrk1pb055m318"; depends=[BH brew dparser ggplot2 inline lattice lbfgs Matrix memoise minqa mvtnorm n1qn1 nlme numDeriv PreciseSums R_utils Rcpp RcppArmadillo RcppEigen rex RxODE StanHeaders]; };
   nlmrt = derive2 { name="nlmrt"; version="2016.3.2"; sha256="1g0qq0a933ay65gkp04qgn2wqk6vw79pj2a228c2ski4rcmkjxyn"; depends=[]; };
   nlnet = derive2 { name="nlnet"; version="1.0"; sha256="1ipds80qlv2zrl51v0n670g9ihb68sm98p06nvs97w05i64g8frq"; depends=[coin fdrtool igraph TSP]; };
   nloptr = derive2 { name="nloptr"; version="1.0.4"; sha256="1cypz91z28vhvwq2rzqjrbdc6a2lvfr2g16vid2sax618q6ai089"; depends=[]; };
@@ -8506,26 +8684,28 @@ in with self; {
   nlshelper = derive2 { name="nlshelper"; version="0.2"; sha256="02xnx0j8p1im1hdwnia3n51dicscjf8s33y475i3dczvhmivvbmf"; depends=[broom dplyr magicaxis mgcv nlme]; };
   nlshrink = derive2 { name="nlshrink"; version="1.0.1"; sha256="0adnr7g3n3brwlvyix8wa7h59gj036l5anv8abqy80ysmfcmsp0y"; depends=[MASS nloptr]; };
   nlsmsn = derive2 { name="nlsmsn"; version="0.0-4"; sha256="1gvpy8rq020l64bdw6n7kv354l7gwa2rgxarm6k0mqq7z21fxf58"; depends=[]; };
-  nlsr = derive2 { name="nlsr"; version="2017.10.4"; sha256="0bzy4h0gy5j1ry8m6vz1bi2h8wbw93qn6vd59vvbvpsj9vrgb6fb"; depends=[digest]; };
+  nlsr = derive2 { name="nlsr"; version="2018.1.28"; sha256="113g656j6zqdqip6dw55pimmwq36xrxgfyix10y3qqn9lxvqrpqq"; depends=[digest]; };
   nlsrk = derive2 { name="nlsrk"; version="1.1"; sha256="0yqcsz5pdhqsrd86g0yx8bdac13fbmvg89phj3v4qvla2jfznjba"; depends=[]; };
   nlstimedist = derive2 { name="nlstimedist"; version="1.1.1"; sha256="1222vj2w4f8xh7fkrzlyarr7980a6wj047p5p0nw3cfna3mmhi5b"; depends=[broom dplyr ggplot2 lazyeval minpack_lm nlstools]; };
   nlstools = derive2 { name="nlstools"; version="1.0-2"; sha256="0mjn1j9fqqgr3qgdr0ki4lfbd0yrkanvya4y2483q3wklqa6qvjc"; depends=[]; };
   nlt = derive2 { name="nlt"; version="2.1-3"; sha256="1j0xrrbr1hvfda8rvnc17lj96m6cz24faxvwn68ilf7j1ab2lkgn"; depends=[adlift EbayesThresh]; };
   nlts = derive2 { name="nlts"; version="0.2-2"; sha256="0bx6xqa3j0k01p43vnv5lcv2pryjzgsak77y1cr9rm2xwqa3j6az"; depends=[acepack locfit]; };
   nmaINLA = derive2 { name="nmaINLA"; version="0.1.1"; sha256="0976jafmdhy2rz5fcarb7hh1vaanm8l2610hk06f5k93xjhypg8j"; depends=[]; };
+  nmathresh = derive2 { name="nmathresh"; version="0.1.2"; sha256="1ldxhk2ry3m8q0881fis403r303n431csmp0gp4785mafy476b5h"; depends=[ggplot2 gridExtra gtable Matrix nnls]; };
   nmfem = derive2 { name="nmfem"; version="1.0.0"; sha256="0bkw27b59knppfh4qnhrcs2j0mpxak7iyb7lskccv6ibym2kvljw"; depends=[d3heatmap dplyr mixtools plyr tidyr]; };
   nmfgpu4R = derive2 { name="nmfgpu4R"; version="0.2.5.2"; sha256="05066rgbbp6kj2d67nzf3d1pf32gypz9ammz4ba88yxblydb3cwk"; depends=[Matrix Rcpp SparseM stringr]; };
   nmw = derive2 { name="nmw"; version="0.1.2"; sha256="1p2h13g0ss0v2jy0ii0r0qgf8i1f0dc8zhii05k2vr6cbiapslv3"; depends=[numDeriv]; };
   nneo = derive2 { name="nneo"; version="0.1.0"; sha256="0jaaz15y1csh3bwmzp7mgx86m3f0w3ykzb8qdvg8ak2grxw3wl6a"; depends=[crul data_table fauxpas jsonlite tibble]; };
   nnet = derive2 { name="nnet"; version="7.3-12"; sha256="17amqnw9dpap2w8ivx53hxha2xrm0drwfnj32li0xk41hlz548r7"; depends=[]; };
   nnetpredint = derive2 { name="nnetpredint"; version="1.2"; sha256="1c6s9wm6vhylwv4xhp2hkllw18zj8hdr17ls9vlxm9qs3wx1v48w"; depends=[RSNNS]; };
-  nnfor = derive2 { name="nnfor"; version="0.9"; sha256="0c74b0k80kygwb2namyzqd49xzakdcgblh63vzbp1dg8a95a835z"; depends=[forecast glmnet MASS neuralnet plotrix]; };
+  nnfor = derive2 { name="nnfor"; version="0.9.2"; sha256="1wxv8s5547spw155rj7nlilsfn5d7m40xpfy87mady93n25pwm3d"; depends=[forecast glmnet MASS neuralnet plotrix]; };
+  nngeo = derive2 { name="nngeo"; version="0.1.0"; sha256="1r92d5bgd7m9d6v424fry4hsbnwzhzww1sqrphwnk2aag70hqv0g"; depends=[geosphere lwgeom RANN sf units]; };
   nnlasso = derive2 { name="nnlasso"; version="0.3"; sha256="1n7karlmgq61z9ywfx9xb5wvmxx40ydpnzzazj1xr70qlv5m0qk4"; depends=[]; };
   nnls = derive2 { name="nnls"; version="1.4"; sha256="07vcrrxvswrvfiha6f3ikn640yg0m2b4yd9lkmim1g0jmsmpfp8f"; depends=[]; };
   noaastormevents = derive2 { name="noaastormevents"; version="0.1.0"; sha256="1pkfmvp20f6xi2iy7l6c67zspp9f4wkrh7s308hlklms2difhp6m"; depends=[choroplethr choroplethrMaps data_table dplyr forcats ggplot2 htmltab hurricaneexposure lubridate maps plyr RColorBrewer stringr tidyr viridis XML]; };
   nodeHarvest = derive2 { name="nodeHarvest"; version="0.7-3"; sha256="0nh3g50rk9qzrarpf29kijwkz9v60682i0ag77j2ipyvhhbpwpkc"; depends=[quadprog randomForest]; };
   nodiv = derive2 { name="nodiv"; version="1.1.8"; sha256="0ws0yp4j26yf45gmbvb6dpq476z8mn8yl6xdrzs0yxliizpz8jsf"; depends=[ape picante raster sp vegan]; };
-  nofrills = derive2 { name="nofrills"; version="0.2.0"; sha256="07c7hwml49dzslbxlq8m6h6xfya5a2s0fg177mv436387qrdyf1n"; depends=[rlang]; };
+  nofrills = derive2 { name="nofrills"; version="0.3.0"; sha256="18hryq6clywlr2f45az6ryslkkarly45nacln4bwk6ip0yfl5s98"; depends=[rlang]; };
   noia = derive2 { name="noia"; version="0.97.1"; sha256="0yldfmnb4ads4s9v9cj1js8zf1w1hxasqq6qjyzwknmvmp7kh62h"; depends=[]; };
   noise = derive2 { name="noise"; version="1.0"; sha256="1a48s9vpz3nc058966lad8hydmg7z0vbzfwcf6nxc9g3c8mw4nig"; depends=[preprocessCore]; };
   nomclust = derive2 { name="nomclust"; version="1.1.1106"; sha256="17hb89k72sw3ya0wm3n95mpx4vj7mpl4mzs8qwl2773dh2mcjgjq"; depends=[cluster dummies]; };
@@ -8536,9 +8716,9 @@ in with self; {
   noncomplyR = derive2 { name="noncomplyR"; version="1.0"; sha256="1a9m6r9cizw42nmy24jdsrsbllg5z84fs8b239axnh1fxzskg2qy"; depends=[MCMCpack]; };
   nonlinearICP = derive2 { name="nonlinearICP"; version="0.1.2.1"; sha256="1m9a1f0yrbjl0nx2l7r76pyi78b2bxj8v4jx92yga91f975mw6np"; depends=[caTools CondIndTests data_tree randomForest]; };
   nonlinearTseries = derive2 { name="nonlinearTseries"; version="0.2.3"; sha256="1pcah255hh3lqabxgjb5fsaap4s2d92lvxw9a48l1p4dkmm1lbsx"; depends=[Matrix Rcpp rgl TSA tseries]; };
-  nonmem2R = derive2 { name="nonmem2R"; version="0.1.7"; sha256="1a3azvf9dbmi3l3crmkv1qvrd0j1d14x4s9hjk2r1cayiazpmbib"; depends=[lattice latticeExtra MASS mvtnorm xpose4]; };
-  nonmemica = derive2 { name="nonmemica"; version="0.7.6"; sha256="0x4xfnl0yjaznpr5a80qmb721lcs9m6gsjyx3qr1jcd5pqhwm01z"; depends=[csv dplyr encode fold lazyeval magrittr metaplot rlang spec tidyr xml2]; };
-  nonnest2 = derive2 { name="nonnest2"; version="0.4-1"; sha256="0lgcrxvyyw789hw80lqbxvvxl6z95qxzq9k5lphl5435xqzpfj6f"; depends=[CompQuadForm lavaan mvtnorm sandwich]; };
+  nonmem2R = derive2 { name="nonmem2R"; version="0.1.8"; sha256="1250y5ylwfc3gwc0ilmzrwzk577bp7pj7bljvamzs3pqy4sflvrv"; depends=[ggplot2 lattice latticeExtra MASS mvtnorm]; };
+  nonmemica = derive2 { name="nonmemica"; version="0.7.9"; sha256="0krixfwzxjalmj4b1ln79c1fxxx07qj71gzdddix3p056cdrxlyq"; depends=[csv dplyr encode fold lazyeval magrittr metaplot rlang spec tidyr xml2]; };
+  nonnest2 = derive2 { name="nonnest2"; version="0.5-1"; sha256="02pflg6frvsq7azwcr660qj9mpj4q3kjx6xr6v5lshg77mjfhgdg"; depends=[CompQuadForm lavaan mvtnorm sandwich]; };
   nonpar = derive2 { name="nonpar"; version="1.0.1"; sha256="0pxks3nga7jrcvq0pzr1axj3a9xvzky836fl7966a09ws1vff7i4"; depends=[]; };
   nonparaeff = derive2 { name="nonparaeff"; version="0.5-8"; sha256="1kkn68m7cqlzx3v539cjxw3x5a2y86lvmyv2k98s87m3yvqg0gdk"; depends=[gdata geometry Hmisc lpSolve psych pwt rms]; };
   nonrandom = derive2 { name="nonrandom"; version="1.42"; sha256="0icm23hw593322z41wmjkwxqknh2pa9kpzbrch7xw1mhp93sd5ll"; depends=[lme4]; };
@@ -8547,9 +8727,9 @@ in with self; {
   nopaco = derive2 { name="nopaco"; version="1.0.3"; sha256="1sbjgzd7q2gjhs5qsy23w30cv73d9d6g08ymq18wppqpir5hikh2"; depends=[Matrix]; };
   nopp = derive2 { name="nopp"; version="1.1.0"; sha256="1zn3ss89i7fwqps6b8syd9jzm68k95p3fdlf285q819dzlk61ypk"; depends=[MASS mlogit]; };
   nor1mix = derive2 { name="nor1mix"; version="1.2-3"; sha256="1bvk888qml9qr7q703s7qzgm0sqfchcjdjqwqllm5vrjx0cnapj3"; depends=[]; };
+  nord = derive2 { name="nord"; version="0.0.1"; sha256="0ajymjn2xw7zik62nhjp11g8bkvsqhhsrzi3bl2k70y544wbl3kn"; depends=[ggplot2]; };
   nordklimdata1 = derive2 { name="nordklimdata1"; version="1.2"; sha256="0c2hbh3qy8nrs275lxpzfgqsfgwp81m4kv0layvnjj09fcybm54x"; depends=[]; };
   norm = derive2 { name="norm"; version="1.0-9.5"; sha256="01j1h412yfjx5r4dd0w8rhlf55997spgb6zd6pawy19rgw0byp1h"; depends=[]; };
-  norm2 = derive2 { name="norm2"; version="2.0.1"; sha256="09447dng9px1ynfp382vjmh5iqdnhc7kxg28cbmqx7ncj1z5a2bm"; depends=[]; };
   normalp = derive2 { name="normalp"; version="0.7.0"; sha256="1s12x2qln3s4bbqsm4p3cq4g6461z73r858g6ym1awamhbmncnrl"; depends=[]; };
   normalr = derive2 { name="normalr"; version="0.0.3"; sha256="1ydlp6nbldq7sq60zdlvqah43xdfvx5nyiqaq2m5vgma6yny930x"; depends=[ddR magrittr MASS purrr shiny]; };
   normtest = derive2 { name="normtest"; version="1.1"; sha256="073r2mwfs6c4vqh8921nlyygl0f20nhv997s0iwf00d3jckkc4pp"; depends=[]; };
@@ -8564,28 +8744,29 @@ in with self; {
   novelist = derive2 { name="novelist"; version="1.0"; sha256="0wzx0vkqvl9sfhbbrzylsxhm3qmjj5w8sy5w6gvd104fn84d49yk"; depends=[]; };
   nowcasting = derive2 { name="nowcasting"; version="0.1.1"; sha256="02f6sd6baq5rqjfiz8a95zlgkijbs85l993wvlbma09kr54f1c3q"; depends=[corpcor DBI httr lubridate magic matlab Matrix RCurl RMySQL xts zoo]; };
   noweb = derive2 { name="noweb"; version="1.0-4"; sha256="17s65m1m8bj286l9m2h54a8j799xaqadwfrml11732f8vyrzb191"; depends=[]; };
-  np = derive2 { name="np"; version="0.60-3"; sha256="12hzmhh59dfifssj08bjwxszxy38irami70bq14dxlm48fjyz17g"; depends=[boot cubature quantreg]; };
+  np = derive2 { name="np"; version="0.60-6"; sha256="1y72x5j9j9mcgcy2xizk31gl843hfkngxdn8s4qw7yhw2qj79hsr"; depends=[boot cubature quantreg]; };
   npIntFactRep = derive2 { name="npIntFactRep"; version="1.5"; sha256="14ms66ppzb4jjsa3fparic6gdn913f6wv2ccjyb02j1ahs4iaa4g"; depends=[ez plyr]; };
   npROCRegression = derive2 { name="npROCRegression"; version="1.0-5"; sha256="09ngfj0bd9cp19lpwsbknp2y71x36k03ph84bmf67wm1q2na7f93"; depends=[lattice]; };
-  nparACT = derive2 { name="nparACT"; version="0.7"; sha256="0ia7s4gcqvcx02gybzizf6dsv75graknsjq7m74iplb2v6rzyywj"; depends=[ggplot2 stringr zoo]; };
+  nparACT = derive2 { name="nparACT"; version="0.8"; sha256="0zwhz52j526n3xd21s7kghjaby56a8g296bkkc6scaa23zn1xg4b"; depends=[ggplot2 stringr zoo]; };
   nparLD = derive2 { name="nparLD"; version="2.1"; sha256="1asq00lv1rz3rkz1gqpi7f83p5vhzfib3m7ka1ywpf2wfbfng27n"; depends=[MASS]; };
   nparcomp = derive2 { name="nparcomp"; version="2.6"; sha256="111ypwyc885lvn64a5sb2k552j6wr3iihmhgx5y475axdiva5pzf"; depends=[multcomp mvtnorm]; };
   nparsurv = derive2 { name="nparsurv"; version="0.1.0"; sha256="1qy9qkkpqrk49vjxbyvl25i4kfk0py6v64izd8lmaw38dynybpy2"; depends=[survival TH_data]; };
   npbr = derive2 { name="npbr"; version="1.6"; sha256="1jvq4snwrwjhhjgm8n8yxd5y94ks5zzi0xwdn931yp300qnikyzc"; depends=[Benchmarking np quadprog Rglpk]; };
-  npcopTest = derive2 { name="npcopTest"; version="1.02"; sha256="1avjhm6rzyawwaabch6cxc7w2if4631jwrd2l8lyd3nk39kpr8ch"; depends=[]; };
+  npcopTest = derive2 { name="npcopTest"; version="1.03"; sha256="1kpa3avi95aa93y038f4zqhhdp8vdscdk0c6397qmqjg34hf1dnr"; depends=[]; };
   npcp = derive2 { name="npcp"; version="0.1-9"; sha256="16vzl3psa806ns387d5mhlp369r45ljcqlhl0lzdjpc1niv572nc"; depends=[]; };
   npde = derive2 { name="npde"; version="2.0"; sha256="1cp4k7jvsw9rc6rrck902nqqjaf2c1nxjic7i9r3fd6yca1lgqb9"; depends=[mclust]; };
   nplplot = derive2 { name="nplplot"; version="4.5"; sha256="1dpbs0jb34gv0zj528357z1j2pwahjbp04rm7jir6qk0jhyaxxgh"; depends=[]; };
   nplr = derive2 { name="nplr"; version="0.1-7"; sha256="1h3qv9dlw2gx8km3slyvrl588nif1n87df8xwmm6p75ziqhn2f56"; depends=[]; };
+  npmlda = derive2 { name="npmlda"; version="1.0.0"; sha256="1dr25an7cac89jyb8zhmj3ry6lq7sh7zxci1injplnk4gzy17mc5"; depends=[]; };
   npmlreg = derive2 { name="npmlreg"; version="0.46-1"; sha256="1gddl6diw8ix8vz7n1r4ps9cjx3q00mafpapskjk7pcz69m6hfv1"; depends=[statmod]; };
   npmr = derive2 { name="npmr"; version="1.1"; sha256="1ss8ypvv6qcdxv7l3szivliwmhidmzi3572p3nz96ysndf56akl4"; depends=[]; };
   npmv = derive2 { name="npmv"; version="2.4.0"; sha256="04lfks2rlax59gxdnbgkpmk2vaax718z6hkgsvmyxf52iby6rvlr"; depends=[Formula]; };
   nppbib = derive2 { name="nppbib"; version="1.0-0"; sha256="075jb13zckkh66jwdmdlq4d2drjcc3lkj26px3w79b91223yymf2"; depends=[]; };
   npphen = derive2 { name="npphen"; version="1.1-0"; sha256="0pbf9sqdapl5q09g1hj5hi4j2wigrd0b6s0gbv1gx4wn68alrals"; depends=[ks lubridate raster rgdal rts snow]; };
-  npregfast = derive2 { name="npregfast"; version="1.5.0"; sha256="07myv5azz2dns7qi3qbr82v2cpjpnb16bf7h7nn56b68n8zmyrip"; depends=[doParallel foreach ggplot2 mgcv sfsmisc shiny shinyjs wesanderson]; };
+  npregfast = derive2 { name="npregfast"; version="1.5.1"; sha256="0s9ci3nybzwykrgi9z2rqp6l15mqbxf759ks0clvkbm7wxv3whk5"; depends=[doParallel foreach ggplot2 mgcv sfsmisc shiny shinyjs wesanderson]; };
   nprobust = derive2 { name="nprobust"; version="0.1.1"; sha256="0aynp42y0qn0jl9f26rk358hjdswkz6anwvni7frxnkb7l1vyrd5"; depends=[ggplot2 Rcpp RcppArmadillo]; };
-  nproc = derive2 { name="nproc"; version="2.0.9"; sha256="0n2jjizwdrdf9jq409lv7z0bxvy7dk7lki6xfp5fmsdcd2dmshly"; depends=[ada e1071 glmnet MASS randomForest ROCR tree]; };
-  npsf = derive2 { name="npsf"; version="0.2.0"; sha256="0cww1fi0amgc9n1hbfy3z7xgwrbcdwvsr2d6l8lpsr1bdcpgbjzv"; depends=[Formula]; };
+  nproc = derive2 { name="nproc"; version="2.1.1"; sha256="0wpny7c1n9mmv1yywlws8gjbidkrikvcqcckrxpba9avjw2c5df8"; depends=[ada e1071 glmnet MASS naivebayes randomForest ROCR tree]; };
+  npsf = derive2 { name="npsf"; version="0.3.1"; sha256="1mv2dzn3gc7b9ynpw8dv22xd31igg4hmkgrds12n9920pghkya44"; depends=[Formula Rcpp]; };
   npsm = derive2 { name="npsm"; version="0.5"; sha256="12jq6ygp3di5rknh7izrr3bxvpn6bqnj3jhfxzf29yf0bd86hzqk"; depends=[plyr Rfit]; };
   npsp = derive2 { name="npsp"; version="0.5-3"; sha256="0ck6iymfc73bzrifdc2sagcliz1yakqk1yv67a3ykha996jsrx99"; depends=[quadprog]; };
   npst = derive2 { name="npst"; version="2.0"; sha256="1y5ij3nmh9pj6p97jpx75g26sk508mznr0l67cwj381zfb77hj1n"; depends=[]; };
@@ -8593,7 +8774,7 @@ in with self; {
   nricens = derive2 { name="nricens"; version="1.5"; sha256="0a7b4kw91qkr9vrm8swflby06a78d059im54zxxgvy42qjsijwqx"; depends=[survival]; };
   nsRFA = derive2 { name="nsRFA"; version="0.7-12"; sha256="182zshwyg0l6shb5wcwibqygxs8qmgma9c4s683za8q3f9l94aqj"; depends=[]; };
   nsROC = derive2 { name="nsROC"; version="1.0"; sha256="0c99z8kknbrnbyyv7p79sj848aq7b5n4m4r7v1yrcs61ackrdn2n"; depends=[sde survival]; };
-  nscancor = derive2 { name="nscancor"; version="0.6"; sha256="1wkk08h8yz2mzgvmq0vr30iiczpbp0304vjwxqgsa3h240m4awsm"; depends=[]; };
+  nscancor = derive2 { name="nscancor"; version="0.6.1-25"; sha256="183kvzlln5lhmi51dm0skq1165c3hhy1yz5h2g7nxwqk2b4p23xj"; depends=[]; };
   nscprepr = derive2 { name="nscprepr"; version="0.1.1"; sha256="1rd32zywrzyxz6hpn9s6cwjlg8q8rz3cc0p3b5gan8bicx0ilwjc"; depends=[dplyr lubridate stringr]; };
   nse = derive2 { name="nse"; version="1-00.17"; sha256="16zam539ir29m9ixyim9bqnf3sdy8aaaaly3wf96i3csgysf8pjc"; depends=[coda mcmc mcmcse np Rcpp sandwich sapa]; };
   nsga2R = derive2 { name="nsga2R"; version="1.0"; sha256="04jj0a3isfc348vg46il5x9l33cr7xawz5w0mm4pwr6djhd8nfhx"; depends=[mco]; };
@@ -8607,7 +8788,7 @@ in with self; {
   numKM = derive2 { name="numKM"; version="0.1.0"; sha256="0pnwb7skp5jx5ibgfkympq59m9sf71gvk5zc0fwik539vrzfykdf"; depends=[survival]; };
   numOSL = derive2 { name="numOSL"; version="2.3"; sha256="1bcj1qk3nx1jqhldx9rcwphvlxspz3bj4vb891hkw2fa2i4559c5"; depends=[]; };
   numbers = derive2 { name="numbers"; version="0.6-6"; sha256="05qmv12b90vkzf2b50qjnp8hja6rms91jj97knx70n2yhpb2lnd9"; depends=[]; };
-  numform = derive2 { name="numform"; version="0.3.0"; sha256="1lxb4gqa5z3ncrh95i10cnv3kxnvc4lqs7yypdhqn5yidddvcydj"; depends=[]; };
+  numform = derive2 { name="numform"; version="0.4.0"; sha256="09vim4ajnnkdf27ag5j8pj7p8qyfakfh3ar1dki8bqzms2d7bkcm"; depends=[]; };
   nutshell = derive2 { name="nutshell"; version="2.0"; sha256="1v11g5wqyxnj29b7akl0cwa34hcqs79ijbiv735pg3df4ggyrzvm"; depends=[nutshell_audioscrobbler nutshell_bbdb]; };
   nutshell_audioscrobbler = derive2 { name="nutshell.audioscrobbler"; version="1.0"; sha256="10fvc5d22gnfb0bkgbww48f0vvcaja96g5gfv85kap939j11172j"; depends=[]; };
   nutshell_bbdb = derive2 { name="nutshell.bbdb"; version="1.0"; sha256="19c4047rjahyh6wa6kcf82pj09smskskvhka9lnpchj13br8rizw"; depends=[]; };
@@ -8620,10 +8801,8 @@ in with self; {
   oaColors = derive2 { name="oaColors"; version="0.0.4"; sha256="040sdqrk9dciylnnrrshlj06s9qhvngii9shx1p8412ip7mk8r1m"; depends=[MASS RColorBrewer]; };
   oaPlots = derive2 { name="oaPlots"; version="0.0.25"; sha256="0c5ig1ar02vg38pjjmp3gd53ij1j7pzajs0zrlfajz141qkv2ysr"; depends=[ggplot2 oaColors]; };
   oai = derive2 { name="oai"; version="0.2.2"; sha256="0q1w29wrppi5sfabdw8px7zr92bgri3jhy0y7dhi46xggxfg9vm1"; depends=[httr plyr stringr tibble xml2]; };
-  oapackage = derive2 { name="oapackage"; version="2.0.23"; sha256="1kkwxwgb23i4m8dlh1ybskardwf8ql0m18cv9c5zi1qd2vkk5dx0"; depends=[RcppEigen]; };
   oaqc = derive2 { name="oaqc"; version="1.0"; sha256="1rc0l79xygmr2rp5sjadzigbj65a13z5xlvrxzy26cl0wsxwhmjf"; depends=[]; };
-  oasis = derive2 { name="oasis"; version="2.1"; sha256="0yh54vip2bx1ifpc3d7acr9488i3w9iyh3gl209fivnrn555plqf"; depends=[fslr mmand neurobase oro_nifti]; };
-  oaxaca = derive2 { name="oaxaca"; version="0.1.3"; sha256="0pi3lrvx5cjl35hww9w8bwh0720zibph636c2ay38k83lzf3kcb8"; depends=[Formula ggplot2 reshape2]; };
+  oaxaca = derive2 { name="oaxaca"; version="0.1.4"; sha256="12w5l2a8i2964rxy9km2srlycx35y7ia8p07ra7gsxr4h8156z3c"; depends=[Formula ggplot2 reshape2]; };
   obAnalytics = derive2 { name="obAnalytics"; version="0.1.1"; sha256="1l4ld120qk0adycmvqrkzada10kb7z03lj2njzqagmacl1z8598f"; depends=[ggplot2 reshape2 zoo]; };
   objectProperties = derive2 { name="objectProperties"; version="0.6.5"; sha256="0wn19byb1ia5gsfmdi6cj05pnlxbr3zcrjabjg3g1d7b58nz7wlh"; depends=[objectSignals]; };
   objectSignals = derive2 { name="objectSignals"; version="0.10.2"; sha256="1rcgfq1i3nz2q93vv4l069f3mli1c6fd5dhhhw1p7cc4sy81008w"; depends=[]; };
@@ -8632,31 +8811,31 @@ in with self; {
   obs_agree = derive2 { name="obs.agree"; version="1.0"; sha256="191xshnrncjqzwd2rdq334vsx0338q3y3k1nbm04hdaysbnla9jv"; depends=[]; };
   obsSens = derive2 { name="obsSens"; version="1.3"; sha256="1vfm1mzsycwkqa39vf3fcdv1s6adps9hw1rxlvl8v9kq746hcabw"; depends=[]; };
   observer = derive2 { name="observer"; version="0.1.2"; sha256="1027827k57qb4xppx0xxxffd1s3n7pz754irdx3v1v3piix8xi8m"; depends=[bazar bit dplyr lazyeval magrittr tibble]; };
-  oc = derive2 { name="oc"; version="0.98"; sha256="17xhclysp91mqcg4bckd9yz7d69znyvmjrqxvpzayf9mm5h875vg"; depends=[pscl]; };
+  oc = derive2 { name="oc"; version="1.01"; sha256="12idrh4jxxq28lgqzr6jzgrvmmwysh5amzhmmaqn3yz49i17gcaf"; depends=[pscl]; };
   occ = derive2 { name="occ"; version="1.0"; sha256="1rpgq6mqrdzz52ln897f5k8yyz5i14s3lxqmy3nwsxf3q2bdf3yh"; depends=[]; };
-  oce = derive2 { name="oce"; version="0.9-22"; sha256="0wxgk4hr5s0kz3qby7zwrp8pdpcwb4p67mrza5gh90kv0hfirnjh"; depends=[gsw testthat]; };
-  oceanmap = derive2 { name="oceanmap"; version="0.0.9"; sha256="07awxbj0gc1k8f6myqk5g54qk1n3bammrpfqi0rbfambgzrw3n5c"; depends=[abind extrafont fields mapdata maps maptools marmap ncdf4 plotrix raster sp]; };
+  oce = derive2 { name="oce"; version="0.9-23"; sha256="0k5h6k4y9bas2aqwkh1dkxmwgx4d41hxy87zfih5iq8ff61d03rr"; depends=[gsw testthat]; };
   ocedata = derive2 { name="ocedata"; version="0.1.3"; sha256="0lzsyaz8zb6kiw86fnaav2g2wfdhyicxvm81ly5a9z4mjch3qj02"; depends=[]; };
   ockc = derive2 { name="ockc"; version="1.0"; sha256="0chzrs3ipa2518r4d35z4fxffgq12p1mwj0hzkxw19gdgq6aa8s7"; depends=[flexclust modeltools]; };
   ocomposition = derive2 { name="ocomposition"; version="1.1"; sha256="0fk8ia95yjlvyvmjw7qg72piqa40kcqq9wlb3flc6a81pys1ycb5"; depends=[bayesm coda]; };
-  odbc = derive2 { name="odbc"; version="1.1.3"; sha256="117qj3bjfrnq58nlzq48128zk18xmnixl20b83cqrf1gqa12svg1"; depends=[BH bit64 blob DBI hms Rcpp]; };
+  odbc = derive2 { name="odbc"; version="1.1.5"; sha256="0wsi2sv51v4ij3b72lzn8jlsc5d45hyj4qmr4iygpimflqsibjqm"; depends=[BH bit64 blob DBI hms Rcpp]; };
   odds_converter = derive2 { name="odds.converter"; version="1.4"; sha256="13y3s04l2jvjhn1i4syz4y3q42ba8br0sp3mks5f5h4cp8w4j3wy"; depends=[]; };
-  oddsratio = derive2 { name="oddsratio"; version="1.0.0"; sha256="19xihbdcyx19lbvylpzqwgdf7ij043zfn7cz5v7ax5byhhz26vdk"; depends=[cowplot ggplot2 MASS mgcv]; };
+  oddsratio = derive2 { name="oddsratio"; version="1.0.2"; sha256="0s9w5iqcabkc7lqdh27nmg7xnw2jpwik5djjlqxb6xgabzls97d6"; depends=[cowplot ggplot2 MASS mgcv]; };
   odeintr = derive2 { name="odeintr"; version="1.7.1"; sha256="0wfb5lgv10p0qyfbn9hdg14bda37v43lpgbwv6nbw63zzbsbazqi"; depends=[BH Rcpp]; };
   odfWeave = derive2 { name="odfWeave"; version="0.8.4"; sha256="1rp9j3snkkp0fqmkr6h6pxqd4cxkdfajgh4vlhpz56gr2l9j48q5"; depends=[lattice XML]; };
   odfWeave_survey = derive2 { name="odfWeave.survey"; version="1.0"; sha256="0cz7dxh1x4aflvfrdzhi5j64ma5s19ma8fk9q2m086j11a1dw3jn"; depends=[odfWeave survey]; };
   odk = derive2 { name="odk"; version="1.5"; sha256="0fcnr4c1clwx1sk6fgg4cx506gdi90n2h05g0i47p4s5bra0qwwl"; depends=[gsheet openxlsx]; };
+  odkr = derive2 { name="odkr"; version="0.1.3"; sha256="0vcpsykr4sq4rq721vyd3wbm4jzlldvvxqh75q7x7wwhjhrnr3qn"; depends=[Hmisc stringr]; };
   odpc = derive2 { name="odpc"; version="1.0.0"; sha256="1mhak9drp0a7h1yrbk08cs00hbvkfkj8r1y6klhr40sdych4q506"; depends=[forecast gdpc Rcpp RcppArmadillo]; };
-  odr = derive2 { name="odr"; version="0.3.2"; sha256="0bp6aw0mv649clrm84firm4wdrxardpzgwaqddkzi222czgba7is"; depends=[]; };
-  oec = derive2 { name="oec"; version="2.5"; sha256="0dg74nwiyfag70dg37xivm3s042jfip259c001c3nlwi3ajcfsb9"; depends=[curl dplyr jsonlite readr servr]; };
-  oem = derive2 { name="oem"; version="2.0.6"; sha256="1q8nwxmf9gizwsn2795qah7f4fb8zhygqxj6kwdy5j7afr1h3zjz"; depends=[BH bigmemory foreach Matrix Rcpp RcppArmadillo RcppEigen]; };
-  officer = derive2 { name="officer"; version="0.1.8"; sha256="1qq74qsrq078hnq3m6phq0xmblq8yzzwf6qpdbd3vmjgjg55nbgc"; depends=[base64enc digest dplyr ggplot2 htmltools magrittr purrr R_utils R6 Rcpp tibble uuid xml2 zip]; };
+  odr = derive2 { name="odr"; version="0.7.3"; sha256="07jfd809wv92ijgw1r1nq9516zi2rkf3ik243br42glf6lszn19p"; depends=[]; };
+  oec = derive2 { name="oec"; version="2.5.2"; sha256="17np562cv6ln3j4b9iawyhbz8kfd5cy1ifj96kzyhv082jgpsk1s"; depends=[dplyr jsonlite magrittr readr servr]; };
+  oem = derive2 { name="oem"; version="2.0.7"; sha256="12z6cgkm8yyk9dz3s1bswccn7vrvca2wiqz0ylr65q88ws828snz"; depends=[BH bigmemory foreach Matrix Rcpp RcppArmadillo RcppEigen]; };
+  officer = derive2 { name="officer"; version="0.2.1"; sha256="0l8xj6zsklh2dyl6kn4piv5wjalqm1ifakxh31zfz714s9w0y8qj"; depends=[base64enc digest htmltools magrittr R_utils R6 Rcpp uuid xml2 zip]; };
   oglmx = derive2 { name="oglmx"; version="2.0.0.3"; sha256="02skdnf89ryl4d8ja1a9mj1jzzmjqjgfdcsf6v5dpjn1z9aycc6c"; depends=[maxLik]; };
   oii = derive2 { name="oii"; version="1.0.2.1"; sha256="1n41hikn53ikyynsravg127cw5csa8s0s1l63w5hym7c6j625ya5"; depends=[Deducer gmodels rapportools]; };
   okcupiddata = derive2 { name="okcupiddata"; version="0.1.0"; sha256="1l04rr4yr73a6q2am9ylyr5prf347hkf2jx735w78rsb6472kbaq"; depends=[]; };
   okmesonet = derive2 { name="okmesonet"; version="0.1.5"; sha256="1kzyzmg702ayzphn9jsk64m51mlnz37ylxiwq5gsr23vaiida680"; depends=[plyr]; };
   olctools = derive2 { name="olctools"; version="0.3.0"; sha256="1gbchwynvmryarz32f24v56kj57h7x6nrrm878fkjkpq140cqwzz"; depends=[Rcpp]; };
-  olsrr = derive2 { name="olsrr"; version="0.3.0"; sha256="0y5s11bqkir4wllk2aigll8791hw5pxn9qk9i32n9d8h5s88spdg"; depends=[dplyr ggplot2 goftest gridExtra magrittr nortest purrr Rcpp tibble tidyr]; };
+  olsrr = derive2 { name="olsrr"; version="0.4.0"; sha256="0ka8a6gm4ynbr2ss4syw2znnqcjly209sh992shyzp01yp5vy7bm"; depends=[dplyr ggplot2 glue goftest gridExtra magrittr nortest purrr Rcpp recipes rlang shiny stringr tibble tidyr]; };
   omd = derive2 { name="omd"; version="1.0"; sha256="0s1wcgivqapbkzjammga8m12gqgw113729kzfzgn02nsfzmsxspv"; depends=[]; };
   omics = derive2 { name="omics"; version="0.1-5"; sha256="1y2x33mfgq98nglhvpr1wq1v6nfiq4njy2yac47x72rpwxsj9vb1"; depends=[lme4 pheatmap]; };
   ompr = derive2 { name="ompr"; version="0.7.0"; sha256="06zhmddg19sjnl18zmjjswggjg58rjgarqj2wqf5jf0g0qz3my2n"; depends=[dplyr lazyeval Matrix progress Rcpp]; };
@@ -8664,7 +8843,7 @@ in with self; {
   oncomodel = derive2 { name="oncomodel"; version="1.0"; sha256="1jyyq9znffiv7rg26mjldbwc5yi2f4f8npsd2ykhxyacb3g96fp1"; depends=[ade4]; };
   onehot = derive2 { name="onehot"; version="0.1.1"; sha256="1cdsz007wr054k5phvihhg4qx0fc039k2s6484m92kws8mb2ziix"; depends=[]; };
   onemap = derive2 { name="onemap"; version="2.1.1"; sha256="0j9c0ynwpzyr548n72wzmmk8gi52qvxlxgzqzn8g6n4v5zmzlkhy"; depends=[fields ggplot2 maps Rcpp reshape2 tkrplot]; };
-  onewaytests = derive2 { name="onewaytests"; version="1.5"; sha256="0v975sjh4x9n0796547l84mdvjj9a0jqy8gdpfb7970v2m8srb5q"; depends=[car ggplot2 moments nortest]; };
+  onewaytests = derive2 { name="onewaytests"; version="1.6"; sha256="0xxqsqnk0s9w0xjj3ixghm9d1yg9fhq5lc5xyicfimnigb13hddl"; depends=[car ggplot2 moments nortest]; };
   onion = derive2 { name="onion"; version="1.2-7"; sha256="17jx7saxcsahyyivln4v9fzzcmidy6ygjd9n81skv5jpr491zkgk"; depends=[]; };
   onlinePCA = derive2 { name="onlinePCA"; version="1.3.1"; sha256="08qivsfnwz5vp089lv9czsaz3nfi42kn9yhgzf27dji18y2xscic"; depends=[Rcpp RcppArmadillo RSpectra]; };
   onls = derive2 { name="onls"; version="0.1-1"; sha256="0m7pnlzkqwzi6jncjzxzfvznipd4wg03zd9fc0ymwm9jvhm4p14g"; depends=[minpack_lm]; };
@@ -8673,7 +8852,6 @@ in with self; {
   ontologySimilarity = derive2 { name="ontologySimilarity"; version="2.2"; sha256="1g1ag2bnfczdx2xyswrc9xbl9krnyibb4639wynm7c0lf2876964"; depends=[ontologyIndex Rcpp]; };
   oompaBase = derive2 { name="oompaBase"; version="3.2.5"; sha256="0269jmdw236jy008ic6iwg9y2fq674alqvd5zdvy1k2grxm72hvw"; depends=[cluster]; };
   oompaData = derive2 { name="oompaData"; version="3.1.1"; sha256="0by9qfxlx6fdmp12qnphlli5hdn5balvx4ckg64fw6vwa291g7b0"; depends=[]; };
-  opefimor = derive2 { name="opefimor"; version="1.2"; sha256="06j5diwp42x7yrhclwyiimfwmx66y23dkwlnkd2lj2zcsgam9s8w"; depends=[]; };
   openEBGM = derive2 { name="openEBGM"; version="0.3.0"; sha256="04wj9z3w7dvdk818iv0xdqlkrc83frsf5sh1xs8bnbp6g0781jqn"; depends=[data_table ggplot2]; };
   openNLP = derive2 { name="openNLP"; version="0.2-6"; sha256="1173cng877sg6ynbs3csfnn956wwrq3yldhhzfbqdsz35draganj"; depends=[NLP openNLPdata rJava]; };
   openNLPdata = derive2 { name="openNLPdata"; version="1.5.3-4"; sha256="0j45rh9qki8r5wavaysrfsvb3wc3x8jjicqff2yi0r34j58xvlv8"; depends=[rJava]; };
@@ -8681,13 +8859,12 @@ in with self; {
   openVA = derive2 { name="openVA"; version="1.0.3"; sha256="09wbhl0g6q1rhi6yr3wpbns4ik7jalpagacn6am09i6zvmz8745j"; depends=[ggplot2 InSilicoVA InterVA4 nbc4va Tariff]; };
   openadds = derive2 { name="openadds"; version="0.2.0"; sha256="1jb8zd3rpxfkjkg895iab6m4cfi53p5vy3nnpjkgq7ym6499qjcv"; depends=[crul dplyr jsonlite maptools rappdirs readr tibble xml2]; };
   openair = derive2 { name="openair"; version="2.1-5"; sha256="19fqg05swsxqs19gi125h9xq43s44fxg51q05y4fhgsvxbvd7aj9"; depends=[cluster dplyr hexbin lattice latticeExtra lazyeval lubridate mapproj MASS mgcv plyr RColorBrewer Rcpp reshape2]; };
-  opencage = derive2 { name="opencage"; version="0.1.2"; sha256="1wnv5mgapdnkpg62sv0375jac2rdnchggjfjnr07bziwpf3xj74d"; depends=[dplyr httr jsonlite memoise]; };
+  opencage = derive2 { name="opencage"; version="0.1.4"; sha256="1lqs38lml73axsjlsjkmcsb2irgs40mjrx2cn3k0bjb63qyb9hf5"; depends=[dplyr httr jsonlite memoise]; };
   opencpu = derive2 { name="opencpu"; version="2.0.5"; sha256="1bs2z3y2zc3aqzfjh6bq3qrpzm106f5xhw7lbyng1bpcp4rch6y3"; depends=[brew curl devtools evaluate httpuv jsonlite knitr mime openssl protolite rappdirs sendmailR sys webutils zip]; };
   opendotaR = derive2 { name="opendotaR"; version="0.1.4"; sha256="17cygsw3nkg6zincfrcdh1509rlz3n5zrv9wvv7mjngm61sn79nf"; depends=[dplyr jsonlite lubridate]; };
   openintro = derive2 { name="openintro"; version="1.7.1"; sha256="059azlasdkmp8f54qpjf3mq5dyqakw0dgx0kx85wfdmhq38zal5n"; depends=[]; };
-  openssl = derive2 { name="openssl"; version="0.9.9"; sha256="1ir7ggs0rxgn83h40r6jg9dzhb7hbcwhkcj5nsdzj7jz61sfgv77"; depends=[]; };
+  openssl = derive2 { name="openssl"; version="1.0"; sha256="1j8smqrb79lnaf2n9icksjiy641fcazsbkhmgg916s3nnyjngjz3"; depends=[]; };
   opentraj = derive2 { name="opentraj"; version="1.0"; sha256="13nqal96199l8vkgmkvl542ksnappkscb6rbdmdapxyi977qrgxk"; depends=[doParallel foreach maptools openair plyr raster reshape rgdal sp]; };
-  openwindfarm = derive2 { name="openwindfarm"; version="0.1.0"; sha256="1f1pmp1h283ypyl0bz54ps0b6hwax59mmlfl0qzickmq4wjdn0qz"; depends=[anytime dplyr foreach httr leaflet magrittr readr]; };
   openxlsx = derive2 { name="openxlsx"; version="4.0.17"; sha256="1mq4lasp12kc30sxcsmz9gskd114l8s7z7wd6svv2nm8qllrhsqi"; depends=[Rcpp]; };
   opera = derive2 { name="opera"; version="1.0"; sha256="0p2wg3srg088l420ykrq0wqvzh1mp6l753rdw35f7kdmaj08mqfq"; depends=[quadprog quantreg RColorBrewer]; };
   operator_tools = derive2 { name="operator.tools"; version="1.6.3"; sha256="1v4dg7xhz24dnp0zxn815x1405ig64ibii6y40la1gvmzcc41dz5"; depends=[]; };
@@ -8702,26 +8879,26 @@ in with self; {
   optbdmaeAT = derive2 { name="optbdmaeAT"; version="1.0.1"; sha256="1y1mvcyjihpj1wgjmifhmd10717wr1srp7h87azs4gfypgsiqchn"; depends=[igraph MASS Matrix]; };
   optextras = derive2 { name="optextras"; version="2016-8.8"; sha256="03wqz16q8kn0ndk241h541fa0g5y0nrfg17vph85cm5xvzdd14cc"; depends=[numDeriv]; };
   optiRum = derive2 { name="optiRum"; version="0.37.3"; sha256="1g3kgfwa7ckh45v14qdi3gq9vy0zfpjaffcgpfapyylrsrnspy3f"; depends=[AUC data_table ggplot2 knitr plyr scales stringr XML]; };
-  optiSel = derive2 { name="optiSel"; version="1.0.0"; sha256="01ia01byp4fnclafr727bjiww8k8cygzbjlrk4i2qpbd0jp2hm6w"; depends=[data_table doParallel ECOSolveR foreach kinship2 magic MASS Matrix nadiv optiSolve pedigree plyr pspline quadprog Rcpp RcppArmadillo stringr]; };
+  optiSel = derive2 { name="optiSel"; version="2.0"; sha256="1k8xbxabbzrlyqb12zdd3jyd8i1cfppah8m8sdkc40y02llgzgyv"; depends=[data_table doParallel ECOSolveR foreach kinship2 magic MASS Matrix nadiv optiSolve pedigree plyr pspline purrr quadprog Rcpp RcppArmadillo reshape2 stringr]; };
   optiSolve = derive2 { name="optiSolve"; version="0.1"; sha256="1wnpj7z0vqf91gzgz6r2ympnljq4mczxnnyk3sq7gvf6df4ic2m1"; depends=[alabama cccp MASS Matrix nloptr plyr Rcpp Rcsdp shapes stringr]; };
-  opticut = derive2 { name="opticut"; version="0.1-0"; sha256="0dh7zw8yrzxw3vfzfm776rdhfczmlwfs3fw568s5cc60xsn8fa93"; depends=[betareg MASS mefa4 pbapply pscl ResourceSelection]; };
+  opticut = derive2 { name="opticut"; version="0.1-2"; sha256="1j479wa7mlp62c2y7shha1w7ybhfy8wvjfaz27kmwd1f61ma1g0l"; depends=[betareg MASS mefa4 pbapply pscl ResourceSelection]; };
   optifunset = derive2 { name="optifunset"; version="1.0"; sha256="18pvdl04ln1i0w30ljdb3k86j27zg2nvrn3ws54c1g6zg9haqhbg"; depends=[]; };
   optigrab = derive2 { name="optigrab"; version="0.7.3"; sha256="1vd4b6mh4a137nvsbpx71jibfd67va1m8iya1gasqiflm6qzszcx"; depends=[magrittr stringi]; };
   optim_functions = derive2 { name="optim.functions"; version="0.1"; sha256="1la3v8yd9cdichp3mka4x86hr9lynh6qfg7h9ab6cwijw6kzkn6g"; depends=[lhs randtoolbox stringr]; };
   optimbase = derive2 { name="optimbase"; version="1.0-9"; sha256="0ivz24kf3yacgq5bl3s3az1pcyhsz0cza5f8vdksy5gchwqplm8n"; depends=[Matrix]; };
   optimization = derive2 { name="optimization"; version="1.0-7"; sha256="09s62ax3w8zijfp2cmh2lvdqbl3nijbjkwq4n3icasi53lzg2179"; depends=[colorspace Rcpp]; };
   optimr = derive2 { name="optimr"; version="2016-8.16"; sha256="02dgwkcjhf6ciwb6x6gyk7nn4v2jras7l1icfd4pjbypiapwnck9"; depends=[numDeriv optextras Rcgmin Rvmmin setRNG]; };
-  optimsimplex = derive2 { name="optimsimplex"; version="1.0-6"; sha256="1hbcd2pq8hlr9vh5k1hh8icr0zyri9ar4k8iq93kpfqpfif9vppp"; depends=[optimbase]; };
-  optimus = derive2 { name="optimus"; version="0.1.0"; sha256="1dz0wczyl1awv3s01malmyrzwijxdywh0xhpfh1i0pncbb4rq3vc"; depends=[mvabund ordinal]; };
+  optimsimplex = derive2 { name="optimsimplex"; version="1.0-7"; sha256="1if32133556zwmijlz6085fg1h65442hy03lzia0ahap3yndqfqy"; depends=[optimbase]; };
+  optimus = derive2 { name="optimus"; version="0.2.0"; sha256="01njyjfrm6kjwx2qq41c0hsgxzydnrmr3538cpbfdn5i0z5blgyx"; depends=[mvabund ordinal]; };
   optimx = derive2 { name="optimx"; version="2013.8.7"; sha256="0pbd7s02isj24npi4m1m1f008xqwzvwp3kn472wz8nmy4zrid30s"; depends=[BB dfoptim minqa numDeriv Rcgmin Rvmmin setRNG svUnit ucminf]; };
   optional = derive2 { name="optional"; version="1.0"; sha256="1bh3w5mcv3rhlpklncwgjr0lmjhv164q17zls0xm00qr8knzm9kp"; depends=[magrittr]; };
   optiscale = derive2 { name="optiscale"; version="1.1"; sha256="1c263w9df66m7lgvzpdfm2zwx9nj8wcdpgh5gijachr2dzffmrp2"; depends=[lattice]; };
   optismixture = derive2 { name="optismixture"; version="0.1"; sha256="0nacfbqlnzajp1hfhf0yzm2d86fxpp4kw2zy33q8k2d4sr56bird"; depends=[Matrix mvtnorm]; };
-  optmatch = derive2 { name="optmatch"; version="0.9-7"; sha256="1ps3qd7kidi0n1m9nxspz03sdw7p3lcg31q3p7c13l3vb226i5yj"; depends=[digest Rcpp RItools survival]; };
+  optmatch = derive2 { name="optmatch"; version="0.9-8"; sha256="1fmk60yyrxgzi24f7a1r7vsbny8064ibm8dmx2h4xvslc1ynxa4c"; depends=[digest Rcpp RItools survival]; };
   optparse = derive2 { name="optparse"; version="1.4.4"; sha256="1ff4wmsszrb3spwfp7ynfs8w11qpy1sdzfxm1wk8dqqvdwris7qb"; depends=[getopt]; };
   optpart = derive2 { name="optpart"; version="2.3-0"; sha256="125b9sfdk4bdcj1vq5rxlrskv1zra31x8d96pdxnqvcnkmwxm4zh"; depends=[cluster labdsv MASS plotrix]; };
   optrcdmaeAT = derive2 { name="optrcdmaeAT"; version="1.0.0"; sha256="16g4612mwyfsckn6l71fbrjnnjv4yvnac1cccbrn3k8jh07qgb1h"; depends=[igraph MASS Matrix]; };
-  optrdd = derive2 { name="optrdd"; version="0.9"; sha256="1l27rs4ry8qsak7fbdnx06bwhzyp432d4slj4bb18agm192j1rq3"; depends=[Matrix quadprog]; };
+  optrdd = derive2 { name="optrdd"; version="1.0"; sha256="0261dwx7g8vxpnwgr53g1qhlwf12sjrb3zb7d02viaxg8fpk61k7"; depends=[CVXR Matrix quadprog]; };
   optrees = derive2 { name="optrees"; version="1.0"; sha256="1zqpjii8dsfs98n58qpif81ckvyxkr0661svhlbgzi19xb2vszqs"; depends=[igraph]; };
   opusminer = derive2 { name="opusminer"; version="0.1-0"; sha256="1m4gsjylz58pbmhgcy4l9hqdsgy8ra1zg0d3rb6h2qiwfyfm0yh4"; depends=[arules Matrix Rcpp]; };
   orQA = derive2 { name="orQA"; version="0.2.1"; sha256="0vivjrpcbql42y078gi91kfpfdpv73j23jkiv8fpazzwzdi8ydqq"; depends=[genefilter gtools nlme Rcpp]; };
@@ -8739,10 +8916,10 @@ in with self; {
   orderstats = derive2 { name="orderstats"; version="0.1.0"; sha256="0a3ga0cjryvbininspsx5wzc96s3fza06s3d5fhbllbixz0rap4a"; depends=[]; };
   ordiBreadth = derive2 { name="ordiBreadth"; version="1.0"; sha256="04faqhas1p9lxhghd4xq07yq1nxv7ns18avhvkql7sy5a9g7bfs1"; depends=[vegan]; };
   ordinal = derive2 { name="ordinal"; version="2015.6-28"; sha256="0lckjzjq2k8rlibrjf5s0ccf17vcvns5pgzvjjnl3wibr2ff4czs"; depends=[MASS Matrix ucminf]; };
-  ordinalClust = derive2 { name="ordinalClust"; version="1.2"; sha256="1h31wd6sd73aaf2zphjcqna89dfkg0wh15nzj8pxbvdk8q8nrd37"; depends=[progress Rcpp RcppArmadillo]; };
-  ordinalCont = derive2 { name="ordinalCont"; version="1.2"; sha256="0a30yba3gmhrl4ln47kk046fk9wqn32hjkqwmrhzjyzl3w4jq8jz"; depends=[boot]; };
+  ordinalClust = derive2 { name="ordinalClust"; version="1.2.1"; sha256="1035471ni5f8129w23kkj7263p5pa9jlihqdq2skda410lj50vnk"; depends=[progress Rcpp RcppArmadillo]; };
+  ordinalCont = derive2 { name="ordinalCont"; version="1.3.0"; sha256="0zi9cfvkb811hhcplp159zpnmmk4rs0nid19gi4g9g3dgn9pa296"; depends=[boot]; };
   ordinalForest = derive2 { name="ordinalForest"; version="2.1"; sha256="1ancr7xdwhbqq3rj5hijrkjbrcaih8rqcx5r41mykrrp1k1s55dd"; depends=[combinat ggplot2 Rcpp]; };
-  ordinalNet = derive2 { name="ordinalNet"; version="2.3"; sha256="1a7bl5478s6vdaav480rrlw5ksdx3bgjibafag66w2v6hrx42acl"; depends=[]; };
+  ordinalNet = derive2 { name="ordinalNet"; version="2.4"; sha256="0c9k3p62d482sl0vg94xm6hllk2mic2nd1c5m4vhci5ycavqzdd3"; depends=[]; };
   ordinalgmifs = derive2 { name="ordinalgmifs"; version="1.0.3"; sha256="0ki91l6vvfxpzq7zgl3d08r5pzx47jxkgf7g0g95580xx2q7n7zx"; depends=[survival]; };
   ore = derive2 { name="ore"; version="1.6.0"; sha256="115s3wq7rrpmx65k9jlpf2x1d218gnl7vsc8zsvmjbsi4gfyliwf"; depends=[]; };
   ores = derive2 { name="ores"; version="0.3.1"; sha256="12war455cfcn2llig7pkx05b70dp5y7warjq03ayqq6i7c945mhb"; depends=[httr]; };
@@ -8768,6 +8945,7 @@ in with self; {
   osi = derive2 { name="osi"; version="0.1.0"; sha256="1wzkvsqifk0g29jnpvykn26myq27pxll3glqlp74djkz0rbpv7aa"; depends=[httr]; };
   osmar = derive2 { name="osmar"; version="1.1-7"; sha256="0q6d8nw7d580bnx66mjc282dx45zw9srczz90b520hjcli4w3i3r"; depends=[geosphere RCurl XML]; };
   osmdata = derive2 { name="osmdata"; version="0.0.5"; sha256="12zfpgp4x5akh25w1f01g5rv4nqqzn2wwysak4vvwh8h7iha0ajc"; depends=[curl httr jsonlite lubridate magrittr Rcpp rvest sp xml2]; };
+  osmose = derive2 { name="osmose"; version="0.1.1"; sha256="0fiijnrvvydhj6j9yb02rn5sg8arcpj3jz977m2zwjgqy878cffg"; depends=[rlist stringr]; };
   osmplotr = derive2 { name="osmplotr"; version="0.3.0"; sha256="0w45riwwjigh1bxf9gx0wdj2yhdizwi6ydprp83pss2z9wph66yb"; depends=[curl e1071 ggm ggplot2 httr osmdata rgeos sp spatstat]; };
   osrm = derive2 { name="osrm"; version="3.1.0"; sha256="12gbgjp3hq0vg0wf6xq0l9wgq0h6w4l0bfwmlnyhq26z9n08a1lq"; depends=[gepaf jsonlite raster RCurl rgeos sp]; };
   otinference = derive2 { name="otinference"; version="0.1.0"; sha256="1l75jjnkyk8yzaw9zyk45jq9ys304i6pzm2xd5apxrb1jk75a3li"; depends=[MASS Rglpk sm transport]; };
@@ -8782,15 +8960,16 @@ in with self; {
   overlap = derive2 { name="overlap"; version="0.3.0"; sha256="09xa4v0g97rn7xjf6m8fb53h2cna5l1p20b72v0hgrhawvxbjmry"; depends=[]; };
   overlapping = derive2 { name="overlapping"; version="1.5.0"; sha256="1xqpkyxpdzcvq7s2hzkbnfddffjfs1xrxhrkvl5i4qv1czdsphjn"; depends=[ggplot2]; };
   owmr = derive2 { name="owmr"; version="0.7.2"; sha256="0206i5zzmfjdd43qziis6kqc0zsvn0l7v5sspjrywjxw2gyjfmwb"; depends=[httr jsonlite magrittr]; };
+  oxcAAR = derive2 { name="oxcAAR"; version="1.0.0"; sha256="19inf2bcpfj4jzfym1v5f1w5fkmcycz5jrfc2hf0wsvixy53lfxa"; depends=[jsonlite stringr]; };
   oz = derive2 { name="oz"; version="1.0-21"; sha256="0p4r8qbpv7q6vad940540pd3lk79pyfj41h2cn22hsy1j0va1qbv"; depends=[]; };
   p2distance = derive2 { name="p2distance"; version="1.0.1"; sha256="1ims8i5z5k97kjpdysgx8g7lgvnvf7amahcrssw7bk38bvbxawni"; depends=[]; };
   p3state_msm = derive2 { name="p3state.msm"; version="1.3"; sha256="0gbrka62ylxx64r3abpk60y92k2lk5smlf8na68qazph8llsl2rv"; depends=[survival]; };
   pAnalysis = derive2 { name="pAnalysis"; version="2.0"; sha256="0pykdlbynzgcbnjs8xs8frgncf53l8qgf6na34adq7da76n570hi"; depends=[coin ggplot2]; };
   pBrackets = derive2 { name="pBrackets"; version="1.0"; sha256="0cwv609hzp8anfv3cgfbspz8w0g1ljfz05wm4xfhwy15v32fckrj"; depends=[]; };
   pCalibrate = derive2 { name="pCalibrate"; version="0.1-1"; sha256="04a7dmf9sjw44y53i469f8fjm8as2vwr0pgk4s91l63pxdqnjvfl"; depends=[epitools exact2x2 MCMCpack]; };
-  pETM = derive2 { name="pETM"; version="0.1.5"; sha256="0a677jbaxhvcjz6846cd1y867srgrmxm78k06xva3hds7hbycm3w"; depends=[Matrix]; };
   pGLS = derive2 { name="pGLS"; version="0.0-1"; sha256="1rlk8q09sikf4vpzsx0c7s6qqh2hxf8dy2bgcm4nnkbv2nfjz438"; depends=[MASS]; };
   pGMGM = derive2 { name="pGMGM"; version="1.0"; sha256="1hkczz38g8a8253jm8vhm8948fs91g6b2rfzkz47srkkby9ksa4x"; depends=[JGL MASS mvtnorm]; };
+  pKSEA = derive2 { name="pKSEA"; version="0.0.1"; sha256="1k9javxbhx28hf5k3i66ggqwlws2w9qwp01g8f7jmyp92pxr3qqd"; depends=[]; };
   pMineR = derive2 { name="pMineR"; version="0.31"; sha256="1j71dcldzmk4kzspx4v5s3vqqkllgwkckfm1g145qgg26c1gyc6l"; depends=[cluster DiagrammeR stringr XML]; };
   pRF = derive2 { name="pRF"; version="1.2"; sha256="17srabk7mam16rdzc5g9ggdrhjjk8wibny40gxvgzkv7qgq7m80x"; depends=[dplyr ggplot2 multtest permute randomForest reshape2]; };
   pROC = derive2 { name="pROC"; version="1.10.0"; sha256="0rm08hf2gxqn5b83ara733w5nihkg1jmdilz67zzrc9iwmqznfa0"; depends=[ggplot2 plyr Rcpp]; };
@@ -8804,7 +8983,7 @@ in with self; {
   packS4 = derive2 { name="packS4"; version="0.9.3"; sha256="0kkh4lfdbr2ydyfpymwrdkms1d4mj8430p6vxvj5wrgl4vh85gwd"; depends=[codetools]; };
   packagedocs = derive2 { name="packagedocs"; version="0.4.0"; sha256="0zw9ana7s42ardphhdaklba02yjj1v8gliq4l98397mjmzc6f4xd"; depends=[crayon devtools digest evaluate highlight htmltools lazyrmd magrittr rmarkdown stringr whisker yaml]; };
   packagetrackr = derive2 { name="packagetrackr"; version="0.1.1"; sha256="0xjq27j7bd7lps0vp9gdinxn19wl10k2cp9wb2xjih7p6l0wd57g"; depends=[dplyr httr magrittr rappdirs]; };
-  packcircles = derive2 { name="packcircles"; version="0.3.0"; sha256="1v95rr3rz54fsi9br4h95xwh5sf9nb8y8zmj0074bp6h24rss3j5"; depends=[Rcpp]; };
+  packcircles = derive2 { name="packcircles"; version="0.3.1"; sha256="0f2y651i96sa7b7mfxg5kinmhhzvcv18lia74fdpdnmc6fxlxg17"; depends=[Rcpp]; };
   packrat = derive2 { name="packrat"; version="0.4.8-1"; sha256="1wvjyvb7yy6hq188msqzf8qa00lhll865jp939byc6d4zpscm0x2"; depends=[]; };
   pacman = derive2 { name="pacman"; version="0.4.6"; sha256="1vdak1hv3j44dsj6cckzc1a86dg933jqhxdys8fyxacmk101l388"; depends=[devtools]; };
   paco = derive2 { name="paco"; version="0.3.2"; sha256="0qf692fqlq0d7hh9yllywaswmj5spy6q1r67nzkhgyh311nhjh6c"; depends=[plyr vegan]; };
@@ -8831,8 +9010,9 @@ in with self; {
   palettetown = derive2 { name="palettetown"; version="0.1.1"; sha256="1kjj1sqib1ns7895plp8c7h317pxwbyxi2shjkcgadkcsv2yjsxn"; depends=[]; };
   palinsol = derive2 { name="palinsol"; version="0.93"; sha256="0k29sl2j7yf4yc0dhb047rxwg9np9l6pdwv6wyb4j80yc07vc9am"; depends=[gsl]; };
   palm = derive2 { name="palm"; version="1.1.0"; sha256="05r6hwkvsd30f5frqxh6k2f1p291s78kfh492lvdmcg8jwrnrvll"; depends=[gsl mvtnorm R6 Rcpp spatstat]; };
+  palmtree = derive2 { name="palmtree"; version="0.9-0"; sha256="0cd5p82gp2g1zq8kf9ybi4wa1r2jg4dbxbp5n01qs4apmyyncl4d"; depends=[Formula partykit]; };
   palr = derive2 { name="palr"; version="0.0.6"; sha256="163c0kcsl0k3fp5q9afv3pb8246j2b3jzmd6g2vcgxb8nhs8wr2f"; depends=[]; };
-  pals = derive2 { name="pals"; version="1.4"; sha256="1dbg5rvagmbxa0kbyp1c9sv6w7r8yc6zn6gqpy2yh6j2h1hiblll"; depends=[colorspace dichromat mapproj maps rgl]; };
+  pals = derive2 { name="pals"; version="1.5"; sha256="0zc4dw8ipvhdm2qvy71k16vf8fmjs08nqbvvdi1k8h4fs648ddhi"; depends=[colorspace dichromat mapproj maps rgl]; };
   pamctdp = derive2 { name="pamctdp"; version="0.3.2"; sha256="0qs8lj5g2fx5rfd0afv76x9x7wqm333qmjv6zzip6pf11dzkghyj"; depends=[ade4 FactoClass xtable]; };
   pamm = derive2 { name="pamm"; version="0.9"; sha256="01dv70ca3zif2b2fkx4xjl24x9p9kc63wf0dj5agdjp5qgbkp1p5"; depends=[gmodels lattice lme4 lmerTest mvtnorm]; };
   pampe = derive2 { name="pampe"; version="1.1.2"; sha256="092n04nrp886kd163v32f5vhp9r7gnayxzqb6pj57ilm5w1yrcsk"; depends=[leaps]; };
@@ -8842,19 +9022,19 @@ in with self; {
   pandocfilters = derive2 { name="pandocfilters"; version="0.1-1"; sha256="18n155rkbr3gq5lsb0bh1v1v0z0r6xr2ald3nh7xh3v9qwxpmsz1"; depends=[jsonlite]; };
   panelAR = derive2 { name="panelAR"; version="0.1"; sha256="1ka2rbl9gs65xh2y2m4aqwh5qj4szibjy101hqfmza9wmdh25gpq"; depends=[car]; };
   panelaggregation = derive2 { name="panelaggregation"; version="0.1.1"; sha256="0x8ldqb9216pclfvs4ymdpian43v2ydkyflpf0k6lcn35r04xfr6"; depends=[data_table]; };
-  pangaear = derive2 { name="pangaear"; version="0.3.0"; sha256="1kkjvcwdnak5rxdz5q066b1q7yx75djm5q0gbx6iqcgvvhly1kpp"; depends=[httr jsonlite oai rappdirs tibble xml2]; };
+  pangaear = derive2 { name="pangaear"; version="0.6.0"; sha256="0dykacf5ckhck08rbk6l5kyw51i2p1ncy44agcxj79cr290cd5ck"; depends=[crul jsonlite oai png rappdirs tibble xml2]; };
   papayar = derive2 { name="papayar"; version="1.0"; sha256="11vkjhazfwfixsr6dba5jrcsr3r3mqgvj5s070b4gp70d6k1z8s5"; depends=[htmltools neurobase oro_nifti servr]; };
   papeR = derive2 { name="papeR"; version="1.0-2"; sha256="1pp6zzdqg9lj61f8p90sxl30vp9knmis7154fmfpm6pynbgr46ms"; depends=[car gmodels xtable]; };
   paperplanes = derive2 { name="paperplanes"; version="0.0.1.9"; sha256="1d9grc95xqxn91lvk8v7w3z90bhl8savkhihwshyjp8ij2xpzfkl"; depends=[]; };
   parSim = derive2 { name="parSim"; version="0.1"; sha256="15d3k91mvbv2hmq0l1jfr0hsv2zkz3cr6axg85kf9bd9q79b85qp"; depends=[dplyr]; };
-  parallelDist = derive2 { name="parallelDist"; version="0.2.0"; sha256="133xcfw34j9virkv1y2r2bdrrhl9csxppd870xn2bl28hhrs8d8j"; depends=[Rcpp RcppArmadillo RcppParallel]; };
+  parallelDist = derive2 { name="parallelDist"; version="0.2.1"; sha256="1w6c5ijnynqq7q15f5mflmxcad6yblpdaflh378lf9vm2xdq0yjp"; depends=[Rcpp RcppArmadillo RcppParallel]; };
   parallelMCMCcombine = derive2 { name="parallelMCMCcombine"; version="1.0"; sha256="05krkd643awqhfrylq9lxr2cmgvnm1msn2x8p1l1483n2gzyklz7"; depends=[mvtnorm]; };
   parallelML = derive2 { name="parallelML"; version="1.2"; sha256="05j0rb81i8342m8drwgmgi1w30q96yf501d83cdq4zhjbchphbl1"; depends=[doParallel foreach]; };
   parallelMap = derive2 { name="parallelMap"; version="1.3"; sha256="026d018fr2a43cbh8bi2dklzr9fxjzdw5qyq84g2i18v5ibr6bd5"; depends=[BBmisc checkmate]; };
   parallelSVM = derive2 { name="parallelSVM"; version="0.1-9"; sha256="0nhxkllpjc3775gpivj8c5a9ssl42zgvswwaw1sdhwg3cxcib99h"; depends=[doParallel e1071 foreach]; };
   parallelize_dynamic = derive2 { name="parallelize.dynamic"; version="0.9-1"; sha256="03zypcvk1iwkgy6dmd5bxg3h2bqvjikxrbzw676804zi6y49mhln"; depends=[]; };
   paramGUI = derive2 { name="paramGUI"; version="2.1.2"; sha256="054l9hqsvgnwipzqrapkhsk67afz93zv1cligqhjl2wggzn9a8sc"; depends=[colorspace fields shiny shinydashboard TIMP]; };
-  paramlink = derive2 { name="paramlink"; version="1.1-1"; sha256="1v2nmigvgc6n33dh2rhn984kxkplc7v5gz72b47zvgxnkcpkrab9"; depends=[assertthat kinship2 maxLik]; };
+  paramlink = derive2 { name="paramlink"; version="1.1-2"; sha256="0y6wsrxwyavipmrjjznr2n920w0p6qlwapxc9mnkh9c6w3yznka2"; depends=[assertthat kinship2 maxLik]; };
   params = derive2 { name="params"; version="0.6.1"; sha256="0w7k8k7z8p1y2w0dhpfssa868xaikfzfdjw2vlj1yl299k5yisax"; depends=[whisker]; };
   paramtest = derive2 { name="paramtest"; version="0.1.0"; sha256="0yn1s1qkgby8x0qn7cy1zhxzc0wyi7bm30pkvijhn5h5afjpylsy"; depends=[boot]; };
   paran = derive2 { name="paran"; version="1.5.1"; sha256="0nvgk01z2vypk5bawkd6pp0pnbgb54ljy0p8sc47c8ibk242ljqk"; depends=[MASS]; };
@@ -8867,31 +9047,30 @@ in with self; {
   parmigene = derive2 { name="parmigene"; version="1.0.2"; sha256="1fsm6pkr17jcbzkj1hbn91jf890fviqk1lq6ls8pihsdgah1zb4d"; depends=[]; };
   parsec = derive2 { name="parsec"; version="1.1.2"; sha256="1hf3c23rnxckw4s2vqzbhkjgiir1nv1811saximj0mbih9w2vqpf"; depends=[]; };
   parsedate = derive2 { name="parsedate"; version="1.1.3"; sha256="0mg7hbm3903iwvmpn51gjpaaq03rsp72hjb1g8h5g84r81iha002"; depends=[]; };
-  parsemsf = derive2 { name="parsemsf"; version="0.1.0"; sha256="0ijnnajcr7zyh0c1k6bz9qa4fkcly1fd44x3qj7mhlx58gnq4sa4"; depends=[dplyr lazyeval RSQLite stringr tidyr]; };
+  parsemsf = derive2 { name="parsemsf"; version="0.1.1"; sha256="0ks4503k06ib5lq4ar2rg0sdni99rjcqxj76b0mclasxbi07kjsa"; depends=[DBI dbplyr dplyr lazyeval RSQLite stringr tidyr]; };
   partDSA = derive2 { name="partDSA"; version="0.9.14"; sha256="1kp0cdsdjiay349jz22iqfzvspny8s343cfan8xahgf931k9h8p6"; depends=[survival]; };
   partialAR = derive2 { name="partialAR"; version="1.0.10"; sha256="18hw0azhvd3737wi5cy8ympwfrj6ag01w1a4csy6kl2kifldg6b7"; depends=[data_table FKF ggplot2 MASS plot3D Rcpp tseries urca zoo]; };
   partialCI = derive2 { name="partialCI"; version="1.1.0"; sha256="00gdr25zz327iscasm74bxj0k6h94m59qwaf9vf8xcqfpp0n22wa"; depends=[data_table FKF ggplot2 glmnet MASS partialAR Rcpp TTR zoo]; };
   partialOR = derive2 { name="partialOR"; version="0.9"; sha256="02vbvln8lswysaafpxq5rxb6crp7yhlc13i42kybv8fr10jaagjj"; depends=[nnet]; };
-  partitionComparison = derive2 { name="partitionComparison"; version="0.2.2"; sha256="1dhwwifq1f4i1qi2sdnhiampbj6bpwc65j3qnbiikzcchs1mb6nd"; depends=[lpSolve Rdpack]; };
+  partitionComparison = derive2 { name="partitionComparison"; version="0.2.3"; sha256="1p0f08za30kpmj9ky4jw6i3nl38i7xrslwsj60ih7gvph2jd39ix"; depends=[lpSolve Rdpack]; };
   partitionMap = derive2 { name="partitionMap"; version="0.5"; sha256="0pi066xaaq0iqr0d7cncdzjd7bacmgrivc4qvhqx0y7q1vifrdjm"; depends=[randomForest]; };
   partitionMetric = derive2 { name="partitionMetric"; version="1.1"; sha256="1wry9d3s814yp79ayab7rzf8z5l2mwpgnrc5j7d2sac24vp4pd48"; depends=[]; };
   partitions = derive2 { name="partitions"; version="1.9-19"; sha256="1pklfnjdc094c8nzkqcdvqzdh8v3p5n8jbg4pf9678iw648saiyx"; depends=[gmp polynom]; };
   partools = derive2 { name="partools"; version="1.1.6"; sha256="0w7p88y4ab4v14k16k95cyb5f3yl2g6ban11775rmi2h9xqkfxk8"; depends=[data_table pdist regtools]; };
   partsm = derive2 { name="partsm"; version="1.1-2"; sha256="0cv3lgkdkn97bc85iwlv9w5pmqwwwsgb717zxnbgb5mzf4xn3f3g"; depends=[]; };
-  party = derive2 { name="party"; version="1.2-3"; sha256="1rpp4qfb7igpqlz0jw12ykd7p3ri8miby6nlvyzbblz3h67lplkb"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; };
-  partykit = derive2 { name="partykit"; version="1.1-1"; sha256="0cl3ir54pafjhk1cvyzx1a8a244x0qa5lky47m7fx1fdj0k7dx6r"; depends=[Formula survival]; };
+  party = derive2 { name="party"; version="1.2-4"; sha256="10i1zxk93c5asinxmi6af1jbw1j4a25d5hzg7viyh73grvlkw7bc"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; };
+  partykit = derive2 { name="partykit"; version="1.2-0"; sha256="1zxgx0wrvn4fj2l6pjwmczj7n4232szm1kzfzaq5cn13qzndnk66"; depends=[Formula inum libcoin mvtnorm rpart survival]; };
   parviol = derive2 { name="parviol"; version="1.1"; sha256="1sfgic86ssd5wjf9ydss9kjd3m4jmm2d1v896sjsv8bydwymbpx3"; depends=[vioplot]; };
   pass = derive2 { name="pass"; version="1.0"; sha256="00dzwg2lnzmrrmzq3fyrs4axswgnsn7f62l2f2a8d8gyf8qzz3nf"; depends=[lars MASS ncvreg]; };
-  passport = derive2 { name="passport"; version="0.1.1"; sha256="0mbkiq9qxlflhyii31phva67q89zm7klpj8f2jwhdagjgy48mflx"; depends=[]; };
+  passport = derive2 { name="passport"; version="0.2.0"; sha256="1jiwivrz7781zmwxmw13rxl80cr9r5pinnk5bvqz8nhfmlx0zmgd"; depends=[]; };
   password = derive2 { name="password"; version="1.0-0"; sha256="1ijzqdw54l8wvpy6ys28njvhplzjxzzi5i9y41vjnrr88n13977v"; depends=[]; };
-  pasta = derive2 { name="pasta"; version="0.1.0"; sha256="12ps5bhyk3hllfa9smyw8vxglr45xz9kvhkx2v65pb86iqm0r0kg"; depends=[]; };
   pastecs = derive2 { name="pastecs"; version="1.3-18"; sha256="0ixlnc1psgqgm71bsf5z5j65lvr92ghpsk9f1ifm94dzjhi6d22i"; depends=[boot]; };
   pastis = derive2 { name="pastis"; version="0.1-2"; sha256="0211pzj3xrmqgxjpspij95kmlpa2klpicw49n6pnz2g1fapjy2bd"; depends=[ape caper]; };
   patPRO = derive2 { name="patPRO"; version="1.1.0"; sha256="1l6q6glklmfgivs4gw0v8q4qa57wr2bna477sn2v401hcwmgnfyn"; depends=[ggplot2 gridExtra plyr RColorBrewer reshape2]; };
   patchDVI = derive2 { name="patchDVI"; version="1.9.1616"; sha256="1akdlzw8v2p1zz09bm88d63jyxj7fv5h50p459p9ml4yc816xvji"; depends=[]; };
   patchPlot = derive2 { name="patchPlot"; version="0.1.5"; sha256="1b4k0dvvj6qwyxbqb36knyrawvy5qq8hl45pz896c9rkqhlg02bx"; depends=[datautils]; };
   patchSynctex = derive2 { name="patchSynctex"; version="0.1-4"; sha256="1li3kw7a77sx6dss8pnxzb0p0sdy1kfm1zdnmhhj043zihrryd5p"; depends=[stringr]; };
-  patentsview = derive2 { name="patentsview"; version="0.1.0"; sha256="01x1k24xz6315j44jshinp6snxmrfsmnqh61hm5rzb3i10wvwlmi"; depends=[httr jsonlite]; };
+  patentsview = derive2 { name="patentsview"; version="0.2.0"; sha256="1n599ksd4vdpfxdlq8bfc0h94v76qbsrrpd5p0q1c6cl083fvvzq"; depends=[httr jsonlite]; };
   pathClass = derive2 { name="pathClass"; version="0.9.4"; sha256="1vzmz3bml37wfxsjhkw9fip90sr1iv521ccr7nlf6xd30wavqywk"; depends=[affy Biobase igraph kernlab lpSolve ROCR svmpath]; };
   pathdiagram = derive2 { name="pathdiagram"; version="0.1.9"; sha256="1j2h9mmwfi95nwhk9214kcfpb1qrmw249mjaza7i9gijmlicraxz"; depends=[shape]; };
   pathmapping = derive2 { name="pathmapping"; version="1.0.2"; sha256="0kx4wxf6lhi58sif8fzr5w4wa0i5253fq4v0ynp721fv1hkvmhvz"; depends=[]; };
@@ -8904,17 +9083,17 @@ in with self; {
   pavo = derive2 { name="pavo"; version="1.3.1"; sha256="1vr3crp71dibm3jn88wh4gdia2l3z4aqmfns7v5pllqadk9s1064"; depends=[geometry mapproj pbmcapply rcdd]; };
   pawacc = derive2 { name="pawacc"; version="1.2.2"; sha256="0d5k0bq8zmb7sjvba3ljp97mba2iycnw44rnsnn2aajs02l1c2xg"; depends=[SparseM]; };
   pawls = derive2 { name="pawls"; version="1.0.0"; sha256="01sf1cmd216ca5iwmw4hfnxi9lvh16r441cfcaa3n77zhq0i4w7n"; depends=[]; };
-  pbapply = derive2 { name="pbapply"; version="1.3-3"; sha256="0iqhymf65jffh00qf056h1p76xf92bfmij6aymlmgnvn24fv4ybk"; depends=[]; };
+  pbapply = derive2 { name="pbapply"; version="1.3-4"; sha256="0lk5kxac09xzdv6vf7ix6r5bfrm7cnpyr2l5mkd4igpciadszzfd"; depends=[]; };
   pbatR = derive2 { name="pbatR"; version="2.2-9"; sha256="1p8rj0lzm4pp1svgy7xia2sclkngzfjbgbikq94s6v92d582wncw"; depends=[rootSolve survival]; };
-  pbdBASE = derive2 { name="pbdBASE"; version="0.4-5"; sha256="0i7rav197787snhw2l5pyb2x0i9d1gl9d7lks2bk0dcxr0ndy9gm"; depends=[pbdMPI pbdSLAP]; };
+  pbdBASE = derive2 { name="pbdBASE"; version="0.4-5.1"; sha256="0ghdq8ry6fiq8qj3plq2n8isjx6iacnhqd1z73bjckmvp99g221n"; depends=[pbdMPI pbdSLAP]; };
   pbdDEMO = derive2 { name="pbdDEMO"; version="0.3-1"; sha256="0vr3dvvhr8j6xvdf308nn37y0lkl2ysm93yf0h7rclvqvsk1pf66"; depends=[pbdBASE pbdDMAT pbdMPI]; };
   pbdDMAT = derive2 { name="pbdDMAT"; version="0.4-2"; sha256="1xiwfpi8r0l8jlfrc35aknm09y4qbn0hvvkscdpcxv9q7zifvl3v"; depends=[pbdBASE pbdMPI]; };
-  pbdMPI = derive2 { name="pbdMPI"; version="0.3-3"; sha256="0bgnx2d7ykfzq85jkiggwakqz2ngmvf7d4lx8qp95w272bkpm779"; depends=[rlecuyer]; };
+  pbdMPI = derive2 { name="pbdMPI"; version="0.3-4"; sha256="05b0f8hqnn5wrmxg1yjd60h5v0hys7bvzb9brgbsxp1nbsashqq9"; depends=[rlecuyer]; };
   pbdNCDF4 = derive2 { name="pbdNCDF4"; version="0.1-4"; sha256="0fd29mnbns30ck09kkh53dgj24ddrqzks4xrrk2hh1wiy7ap1h95"; depends=[]; };
   pbdPROF = derive2 { name="pbdPROF"; version="0.3-1"; sha256="0a7c31605si062vbwcwngv770axlwyhh00cvdfqw3hv421p61sj8"; depends=[]; };
-  pbdRPC = derive2 { name="pbdRPC"; version="0.1-1"; sha256="0ddn6ba9nvrh90jii2z9jx4graqaa985ja2q4h3q5q2d6dpm7j7r"; depends=[]; };
-  pbdSLAP = derive2 { name="pbdSLAP"; version="0.2-2"; sha256="0d7hj1rq4vmp9i4v7d3pjivqpw0pv06xjl4wlnjj42jfxdg70yvh"; depends=[pbdMPI rlecuyer]; };
-  pbdZMQ = derive2 { name="pbdZMQ"; version="0.2-6"; sha256="1kqpl8y55a9m2qkh56wb9qgxxwckwwjabj2m519nvwv55avkgy61"; depends=[R6]; };
+  pbdRPC = derive2 { name="pbdRPC"; version="0.2-0"; sha256="0qndlgv6r9k17mz75g7d2k5alg0qp5h7scpnz2zl6kqlpr8z6l2p"; depends=[]; };
+  pbdSLAP = derive2 { name="pbdSLAP"; version="0.2-3"; sha256="1famaxkm385ka7kgk997lvkb68cpch0vb26l94vzkhxwfxl0fyjp"; depends=[pbdMPI rlecuyer]; };
+  pbdZMQ = derive2 { name="pbdZMQ"; version="0.3-2"; sha256="0dzwwffinn9bbb73dmmh88c374f9057bl0a8dq97fbv63j4a5qpc"; depends=[]; };
   pbivnorm = derive2 { name="pbivnorm"; version="0.6.0"; sha256="05jzrjqxzbcf6z245hlk7sjxiszv9paadaaimvcx5y5qgi87vhq7"; depends=[]; };
   pbkrtest = derive2 { name="pbkrtest"; version="0.4-7"; sha256="1si3bhi59xc51a0pgjjglccq3h4aljyhw2k1b8574s145fnh7fsw"; depends=[lme4 MASS Matrix]; };
   pbmcapply = derive2 { name="pbmcapply"; version="1.2.4"; sha256="0wh0ljy9nbb7ifh06bf79hwc2ci9482hdppgpa1zpz8x2mgyvy04"; depends=[future]; };
@@ -8925,12 +9104,13 @@ in with self; {
   pcaBootPlot = derive2 { name="pcaBootPlot"; version="0.2.0"; sha256="1320d969znk9xvm1ylhc3a31nynhzyjpbg1fsryq72nhf8jxijaa"; depends=[FactoMineR RColorBrewer]; };
   pcaL1 = derive2 { name="pcaL1"; version="1.5.2"; sha256="1f7481wn2c935llb9visfdlv958ixxqybp5r2dy7nm18jacf2a0l"; depends=[]; };
   pcaPA = derive2 { name="pcaPA"; version="2.0.2"; sha256="14hi09qksr1z54l268yv4g2x5hlikir7zir4ccd9yi5z1918ksj5"; depends=[ggplot2 ltm mc2d polycor sfsmisc]; };
-  pcaPP = derive2 { name="pcaPP"; version="1.9-72"; sha256="0i2822bv86dpqmk3q17x61nsp3gjjnn4nr8191rwvbiib7xhpgaq"; depends=[mvtnorm]; };
+  pcaPP = derive2 { name="pcaPP"; version="1.9-73"; sha256="1z2kdf9gfp965xbcd4rg6vf20d1bl443na0qjkpq7gmzpaq6cifa"; depends=[mvtnorm]; };
   pcadapt = derive2 { name="pcadapt"; version="3.0.4"; sha256="031ql3xppjkqrm17bvccj61hyf38skjb4qv6rs0l1h2ib8jql8ka"; depends=[ggplot2 MASS robust vcfR]; };
   pcalg = derive2 { name="pcalg"; version="2.5-0"; sha256="002y7b0r750nbnrg8w53q2fyvk13jk4jrqlf3f2777qw7si5vmz3"; depends=[abind bdsmatrix BH clue corpcor dagitty fastICA ggm gmp graph igraph RBGL Rcpp RcppArmadillo robustbase sfsmisc vcd]; };
+  pccc = derive2 { name="pccc"; version="1.0.0"; sha256="1z9vr6r5mnk73gk5p4qk7mnmn065b55kbsgr414nrkii0in6g0sp"; depends=[dplyr Rcpp]; };
   pcdpca = derive2 { name="pcdpca"; version="0.4"; sha256="0ys4hrin0w3f87d1d986wvrfkfwapzj9hz7d7v92r60ns74g7r5m"; depends=[fda freqdom]; };
   pcensmix = derive2 { name="pcensmix"; version="1.2-1"; sha256="1yrz4hdj52in8z65qyl18kh7frv75rb8ss5ljv3vbm6yhxi32jnd"; depends=[]; };
-  pcev = derive2 { name="pcev"; version="2.2.1"; sha256="0n8gjfgxbmapakkcpklj2kzyhx4gf914hqv2hrvbvvz0f6f6vv4c"; depends=[corpcor RMTstat]; };
+  pcev = derive2 { name="pcev"; version="2.2.2"; sha256="1l0afcdzkxzkhkc8ln2fzi50hc7nfq46lg6hhx6rrzkb41w82iqw"; depends=[corpcor RMTstat]; };
   pcg = derive2 { name="pcg"; version="1.1"; sha256="194j72hcp7ywq1q3dd493pwkn1fmdg647gmhxcd1jm6xgijhvv87"; depends=[]; };
   pch = derive2 { name="pch"; version="1.3"; sha256="13pfrvp539fz4hxp08yil93caw3cjdna7xnky5fqd0lhc84fwq76"; depends=[survival]; };
   pcnetmeta = derive2 { name="pcnetmeta"; version="2.6"; sha256="0rpd1bgg932xhj03fnskhbg7ni9nfd8qrvxvix8qmbgw8bwdsbgd"; depends=[coda rjags]; };
@@ -8940,7 +9120,7 @@ in with self; {
   pcrsim = derive2 { name="pcrsim"; version="1.0.2"; sha256="04177xl513k01prmf93kha91dyxmb9v80d1y4lz73fxsifj6bhar"; depends=[data_table ggplot2 gWidgets mc2d plyr strvalidator]; };
   pcse = derive2 { name="pcse"; version="1.9"; sha256="04vprsvcmv1ivxqrrvd1f8ifg493byncqvmr84fmc0jw5m9jrk3j"; depends=[]; };
   pdR = derive2 { name="pdR"; version="1.5"; sha256="072ra8czfvgcgkbdfkjhbpk7f23zh717f9sh84vls9j0wyrai6hn"; depends=[boot car coefplot lmtest papeR plm sandwich]; };
-  pdSpecEst = derive2 { name="pdSpecEst"; version="1.1.1"; sha256="1984gxyp9y8hnc3cqdr51bk2l85qpqrkrlslw38q2dmsq40v26rz"; depends=[astsa ddalpha multitaper Rcpp RcppArmadillo]; };
+  pdSpecEst = derive2 { name="pdSpecEst"; version="1.2.1"; sha256="0j68jmsm6c9pan195k0l0nm1ldbipl5ywlbwkz61dblspizh04iw"; depends=[ddalpha multitaper Rcpp RcppArmadillo]; };
   pdc = derive2 { name="pdc"; version="1.0.3"; sha256="0503n7aiy0qrl790yfjvpm7bbyz1i4818rlg96q0fvzb58zqmyvc"; depends=[]; };
   pder = derive2 { name="pder"; version="1.0-0"; sha256="097klk334bjhlss8x73f27l7jcp7d7vh10jr5sazm5kcvi95619i"; depends=[]; };
   pdfCluster = derive2 { name="pdfCluster"; version="1.0-2"; sha256="0kbci54dlzn736835fh18xnf2pmzqrdmwa3jim29xcnwa1r2gklb"; depends=[geometry]; };
@@ -8949,7 +9129,7 @@ in with self; {
   pdftables = derive2 { name="pdftables"; version="0.1"; sha256="1gnwjijr89cczchc7yi4w5xiw0dalbymvj23rymm8cfra34iwn5p"; depends=[httr]; };
   pdftools = derive2 { name="pdftools"; version="1.5"; sha256="09z4174zbp0nzdkpwx5yxxlmzskqg48gc6n5qpmx0hkanfz8g7ls"; depends=[Rcpp]; };
   pdist = derive2 { name="pdist"; version="1.2"; sha256="18nd3mgad11f2zmwcp0w3sxlch4a9y6wp8dfdyzvjn7y4b4bq0dd"; depends=[]; };
-  pdmod = derive2 { name="pdmod"; version="1.0"; sha256="1czpaghp2lcad4j6wxswdfw0n9m0phngy966zr4fr3ciqpx3q129"; depends=[mco]; };
+  pdmod = derive2 { name="pdmod"; version="1.0.1"; sha256="04bk9gjg2c55hk6k1hy0m29927s8a5ig6mr4xb89npam68g0pcms"; depends=[mco]; };
   pdolsms = derive2 { name="pdolsms"; version="0.2"; sha256="18gwr1xnm7jbqna911b7haa9sv1i2qvq18w00dkbnj796rh0h78f"; depends=[reshape2]; };
   pdp = derive2 { name="pdp"; version="0.6.0"; sha256="12x9j3lwnss45wlafd5kc4nw293vhffijmgyafahqwz9if829m10"; depends=[ggplot2 gridExtra lattice magrittr mgcv plyr viridis]; };
   peacots = derive2 { name="peacots"; version="1.3"; sha256="128qpz06b0giz80lp9yq9l6pxcjglfr97yickg7z64vzzl2jilmq"; depends=[]; };
@@ -8971,7 +9151,7 @@ in with self; {
   penalized = derive2 { name="penalized"; version="0.9-50"; sha256="0q60pgmx2wbnc7i1zf1i0sxn1zy257hl73ii0abx83zpcywq9vb6"; depends=[Rcpp RcppArmadillo survival]; };
   penalizedLDA = derive2 { name="penalizedLDA"; version="1.1"; sha256="1bw5wiixmmg1vr3v0d59vh67f0gy2rvr30bi58skvrkb25qcjq6l"; depends=[flsa]; };
   penalizedSVM = derive2 { name="penalizedSVM"; version="1.1"; sha256="0zc36cgcrdy4rwhg4hhhahymqfalvc5v2zmqq56ikz5blln82qvq"; depends=[corpcor e1071 lhs MASS mlegp statmod tgp]; };
-  penaltyLearning = derive2 { name="penaltyLearning"; version="2017.07.11"; sha256="0ab1dy0kh3fmbcdg29qhvrjnaxpk7lqcnsz4bwplq0ia3assc8sl"; depends=[data_table geometry ggplot2]; };
+  penaltyLearning = derive2 { name="penaltyLearning"; version="2017.12.08"; sha256="0pkd853dq7frp0f9aii99qpnx9mk4gzb73iykfa5q9bnp45z8qd0"; depends=[data_table geometry ggplot2]; };
   pencopula = derive2 { name="pencopula"; version="0.3.5"; sha256="1cy36pprbrfabk9n3x4d1xbj1vd2dda7xq3ihj2hzniwn77j63wi"; depends=[fda lattice latticeExtra quadprog]; };
   pencopulaCond = derive2 { name="pencopulaCond"; version="0.2"; sha256="18hjjxnd0l2ms20ddqkghfbd4as5kq2rgwqzpz4y38k6nw76x511"; depends=[doParallel fda foreach igraph lattice latticeExtra pacotest quadprog TSP]; };
   pendensity = derive2 { name="pendensity"; version="0.2.10"; sha256="023gl993jniv5r8l9nkaha7v6k2rb1hxm7z543dpr4186kjbi7zl"; depends=[fda lattice]; };
@@ -8991,25 +9171,26 @@ in with self; {
   permGS = derive2 { name="permGS"; version="0.2.5"; sha256="0d2kp3c1fmnjjmsvc2qwh6m66yqvy2vrrxgv1fj2i4clsbavfa0y"; depends=[coin survival]; };
   permPATH = derive2 { name="permPATH"; version="1.1"; sha256="06h1lqpmkg4ajjh4r837qp094h105n4mpvafnp2nsbv9yyayd4h8"; depends=[R2HTML xtable]; };
   permubiome = derive2 { name="permubiome"; version="1.1"; sha256="02fg1g96pg6a87n8mhrls54xp0vnqqsgg39nnjirxr7hd74l71x9"; depends=[ggplot2]; };
+  permuco = derive2 { name="permuco"; version="1.0.1"; sha256="19spn5ra41v7s4ixdg5pbksfi8linhvhvfmllz72iw6wbzsw8m0m"; depends=[MASS Matrix permute]; };
   permutations = derive2 { name="permutations"; version="1.0-2"; sha256="04lak21x0z1cskgm5w4xdyq59kmyrz64bwfpf332vfka54aiv8lk"; depends=[magic numbers partitions]; };
   permute = derive2 { name="permute"; version="0.9-4"; sha256="1w8wzk1fg9q7wvisnfp2js70dg0m9wi12gkdhpyngpbdcgssahd5"; depends=[]; };
   perry = derive2 { name="perry"; version="0.2.0"; sha256="1lfmcq2xsxmfs7cxvhgxcsggslgjicbaks4wcjw1yjh67n559j46"; depends=[ggplot2 robustbase]; };
   persiandictionary = derive2 { name="persiandictionary"; version="1.0"; sha256="0rgi36ngpiax3p5zk4cdgf3463vgx7zg5wxscs2j7834yh37jwax"; depends=[]; };
-  personalized = derive2 { name="personalized"; version="0.1.2"; sha256="189hqji0bjknkj64x23888ybl0ckyw3xk59mkw60r3m25ssajbm6"; depends=[foreach gbm ggplot2 glmnet kernlab mgcv plotly survival]; };
+  personalized = derive2 { name="personalized"; version="0.1.3"; sha256="0xi13mcwr9h0fxb4ihfvjp7xvakskfvlcbbcfk4bvxfwp6yv7vv7"; depends=[foreach gbm ggplot2 glmnet kernlab mgcv plotly survival]; };
   personograph = derive2 { name="personograph"; version="0.1.3"; sha256="07lrlbw4222l1d5rwn0hfqliyk8sqjf6ipz4n2zwcbk113bb8sy7"; depends=[grImport]; };
   perspectev = derive2 { name="perspectev"; version="1.1"; sha256="175s1nq5z4gfs5qb39lq230g6n0v8fxzs5hr9j2rgx0knpbjfq03"; depends=[ape boot doParallel foreach ggplot2 mapproj sp]; };
   perturb = derive2 { name="perturb"; version="2.05"; sha256="18ydmmp8aq4rf9834dmsr4fr9r07zyn97v8a1jqz3g9njza983la"; depends=[]; };
+  perturbR = derive2 { name="perturbR"; version="0.1.0"; sha256="0zn10xm39sbv9g8mvp582c6bwpdk6ss1b50pdk7nkdmih3g6cxqb"; depends=[dils ggplot2 igraph mcclust]; };
   pesticides = derive2 { name="pesticides"; version="0.1"; sha256="1w180hqqav0mh9sr9djj94sf55fzh4r373a7h08a2nz9nyjpq09w"; depends=[]; };
   petrinetR = derive2 { name="petrinetR"; version="0.1.0"; sha256="0na8srzwi933bva9j3hrn4ji8s58dm28jpxw9q13mpahzch4r454"; depends=[dplyr visNetwork]; };
-  petro_One = derive2 { name="petro.One"; version="0.1.1"; sha256="0x2zdjb3bb8k3cnkxrq5kikcik1ibiiizss8fkd48w9kw8wia688"; depends=[cluster dplyr ggplot2 graph magrittr RColorBrewer Rgraphviz rvest RWeka tibble tm urltools wordcloud xml2]; };
+  petro_One = derive2 { name="petro.One"; version="0.1.3"; sha256="13bxd011lprimy5m3z08l4yng2fkp28b1ad1bqs0piffx5bxw13n"; depends=[cluster data_table dplyr ggplot2 graph magrittr RColorBrewer Rgraphviz rvest RWeka tibble tm urltools wordcloud xml2]; };
   pewdata = derive2 { name="pewdata"; version="0.2.0"; sha256="17j8fdn9x6hannr91zyccya523z3zm03gr517xfcyrd0m486xnqb"; depends=[httr magrittr purrr rvest]; };
   pez = derive2 { name="pez"; version="1.1-1"; sha256="14n9s604wwh07kjir5kw6sra6bbmnpg00h3zvli3zqd8lx892hm8"; depends=[ade4 ape apTreeshape caper FD Matrix mvtnorm picante quantreg vegan]; };
   pfa = derive2 { name="pfa"; version="1.1"; sha256="0ikdd7ps8wnjp9nm66w447m06hqxnnk553jglxikl2w5d9vk6b31"; depends=[lars POET quantreg]; };
-  pgam = derive2 { name="pgam"; version="0.4.12"; sha256="0vhac2mysd053bswy3xwpiz0q0qh260hziw6bygpf83vkj94qf2v"; depends=[]; };
+  pgam = derive2 { name="pgam"; version="0.4.15"; sha256="12llflsb32dfvxl3nbyb9bsl9bmd35g5g163hd3axzmg1bgi21ls"; depends=[]; };
   pgee_mixed = derive2 { name="pgee.mixed"; version="0.1.0"; sha256="115vvpv54q80486i3xs2yhmfyx476cf4g1v43q6l7wj3jwzcrvbg"; depends=[copula mvtnorm Rcpp RcppArmadillo]; };
   pgirmess = derive2 { name="pgirmess"; version="1.6.7"; sha256="1an7isajb4h04i2sfnssnxfi61v17fh803ddf8hmcfqkpig4yi6p"; depends=[boot maptools rgdal rgeos sp spdep splancs]; };
   pglm = derive2 { name="pglm"; version="0.2-1"; sha256="14hnlidf62kzcf83jc7k17n4hjjaj82scdwh8a7qxd056vygkqx2"; depends=[maxLik plm statmod]; };
-  pgmm = derive2 { name="pgmm"; version="1.2"; sha256="0f0wdcirjyxzg2139c055i035qzmhm01yvf97nrhp69h4hpynb2n"; depends=[]; };
   pgnorm = derive2 { name="pgnorm"; version="2.0"; sha256="1k9z7pvmranr8m62v7amc0pj6lwzh3wqi79gg3mflifn1mr6c057"; depends=[]; };
   pgraph = derive2 { name="pgraph"; version="0.8"; sha256="1r784snci5m81qljfh1r3w8qzszmy0476zvsd1alh43afzg9zpr5"; depends=[energy glasso glmnet SAM]; };
   pgs = derive2 { name="pgs"; version="0.4-0"; sha256="1zf5sjn662sds3h06zk5p4g71qnpwp5yhw1dkjzs1rs48pxmagrx"; depends=[gsl R2Cuba]; };
@@ -9017,7 +9198,7 @@ in with self; {
   ph2bye = derive2 { name="ph2bye"; version="0.1.4"; sha256="0h5d8d4bagkp6g0nb67cb225ki5p1amnclnfj6afgdcsli5clr67"; depends=[animation nleqslv Rcpp VGAM]; };
   ph2mult = derive2 { name="ph2mult"; version="0.1.1"; sha256="0w3w18fkr9xzv6mpb00cz5id33zgsnl6s8zgjpchzvrhmpjpp437"; depends=[clinfun]; };
   phalen = derive2 { name="phalen"; version="1.0"; sha256="0awj9a48dy0azkhqkkzf82q75hrsb2yw6dgbsvlsb0a71g4wyhlr"; depends=[sqldf]; };
-  phangorn = derive2 { name="phangorn"; version="2.3.1"; sha256="1sv3g2yhbmgkcffizhyzjhkymjih1jq72g1as1asdw65nbsk332i"; depends=[ape fastmatch igraph magrittr Matrix quadprog Rcpp]; };
+  phangorn = derive2 { name="phangorn"; version="2.4.0"; sha256="0xc8k552nxczy19jr0xjjagrzc8x6lafasgk2c099ls8bc1yml1i"; depends=[ape fastmatch igraph magrittr Matrix quadprog Rcpp]; };
   phantom = derive2 { name="phantom"; version="0.1.2"; sha256="15b770awvzjp8x44psifngnvsn2fs8s43v2lxj336r6k2iswpc9x"; depends=[gplots MASS NMF RColorBrewer Rcpp RcppArmadillo]; };
   phase1RMD = derive2 { name="phase1RMD"; version="1.0.8"; sha256="1wvlajsqb8y8f30asq1lyk87kmakh2risnky98g5gday765y90qa"; depends=[arrayhelpers boot coda ggplot2 mvtnorm rjags]; };
   phaseR = derive2 { name="phaseR"; version="1.3"; sha256="1hwclb7lys00vc260y3z9428b5dgm7zq474i8yg0w07rxqriaq2h"; depends=[deSolve]; };
@@ -9027,20 +9208,22 @@ in with self; {
   phenex = derive2 { name="phenex"; version="1.4-5"; sha256="00lsymflbmlxzxz8rxcpc94pc9zmhybial9f2xkz98h6h45zgrjl"; depends=[DEoptim foreach]; };
   phenmod = derive2 { name="phenmod"; version="1.2-3"; sha256="0dxwx8c7zka29fq7svrvn8bghj8jh8grbrgsw4pvavx2439cldak"; depends=[gstat lattice pheno RColorBrewer]; };
   pheno = derive2 { name="pheno"; version="1.6"; sha256="0xdya1g1ap7h12c6zn3apbkxr725rjhcp4gbdchkvcnwz4y9vw8c"; depends=[nlme quantreg SparseM]; };
-  pheno2geno = derive2 { name="pheno2geno"; version="1.3.1"; sha256="1k1hw5qxrwxy502zkcfcz0nxjqmvdk1fgghjc512vq7x5znblz3v"; depends=[mixtools qtl VGAM]; };
+  pheno2geno = derive2 { name="pheno2geno"; version="1.4.0"; sha256="0fy8z6x1y0sakp07jb6zs0w0f86pbbllicj4qylxzfd5rpn1rqr0"; depends=[mixtools qtl VGAM]; };
+  phenoCDM = derive2 { name="phenoCDM"; version="0.0.2"; sha256="07fmljdn5dg9v2mv0k7hjk7xlldhvzvcxia8vda0xkpn3hlrriid"; depends=[rjags]; };
   phenology = derive2 { name="phenology"; version="6.0.3"; sha256="17idd9znwmgsa6wzijc4ahvlld4qp6sihyg3cdv91gfl0yjd51w1"; depends=[HelpersMG lmf numDeriv optimx]; };
   phenomap = derive2 { name="phenomap"; version="1.0.1"; sha256="1v25aga9lnph3z8pn887a5phl720a3mpk96bmxvjy89633rvjxk4"; depends=[dplyr phenex plyr raster rgdal stringr]; };
   phenopix = derive2 { name="phenopix"; version="2.3.1"; sha256="1yy163nh2b74m0v7f2gkgxaplvw4whs2h30bkw4chl0zyrcrci86"; depends=[bcp doParallel foreach gtools iterators jpeg plyr raster SDMTools sp stringr strucchange zoo]; };
   phia = derive2 { name="phia"; version="0.2-1"; sha256="0rv2akl5a488vax4sd9wnx765mch4vvcmg3iyxyljzl5kpqh5r00"; depends=[car Matrix]; };
   philentropy = derive2 { name="philentropy"; version="0.0.3"; sha256="00fpbmxg8m8apjb6cdrhh9rw3vp1j65ccvsqj1xlfcn1x5l1h3h8"; depends=[dplyr KernSmooth Rcpp]; };
-  phmm = derive2 { name="phmm"; version="0.7-5"; sha256="0dil0ha199yh85j1skwfdl0v02vxdmb0xcc1jdbayjr5jrn9m1zk"; depends=[lattice Matrix survival]; };
+  phmm = derive2 { name="phmm"; version="0.7-10"; sha256="1ra5qf24qmwjf8cra9yh20i2s8jv0kzb1gyw96il8r5cdl20gbcz"; depends=[lattice Matrix survival]; };
   phonR = derive2 { name="phonR"; version="1.0-7"; sha256="0al2cbynnbvmd90lk1w1g1ppslqq0ng8vbb6bl7m4kqwd2lgv056"; depends=[deldir plotrix splancs]; };
   phonTools = derive2 { name="phonTools"; version="0.2-2.1"; sha256="01i481mhswsys3gpasw9gn6nxkfmi7bz46g5c84m13pg0cv8hxc7"; depends=[]; };
   phonenumber = derive2 { name="phonenumber"; version="0.2.2"; sha256="1m5idp538lvynmfp8m7l89js6hk5lpp26k419bdvj3hd3ap0n9lg"; depends=[]; };
-  phonics = derive2 { name="phonics"; version="0.7.5"; sha256="0llwn0ws5g0ri6bywj5jkx67954xil8w666nhy9jwnx0jzpa0cf2"; depends=[BH Rcpp]; };
-  photobiology = derive2 { name="photobiology"; version="0.9.17"; sha256="02xk0vpcfmwsr8h2yjgp5lh6rlzv26yz14r78z686g02hpzcf0d8"; depends=[caTools dplyr lubridate plyr polynom rlang splus2R tibble]; };
+  phonics = derive2 { name="phonics"; version="1.0.0"; sha256="02bkw589iijlzbw0cbg9qhq99jij2p92cqrxa77chkly4naqkqds"; depends=[BH Rcpp]; };
+  photobiology = derive2 { name="photobiology"; version="0.9.18-1"; sha256="0sn6avmic8vad6xs84hbw4scmrififn398gz0qmnbgbld3qqbxjq"; depends=[caTools dplyr lubridate plyr polynom rlang splus2R tibble]; };
+  photobiologyFilters = derive2 { name="photobiologyFilters"; version="0.4.4"; sha256="14aiw5jxd6wnngy1rbbm85l0yx64nxrancal017wvr5n867c32d6"; depends=[photobiology]; };
   photobiologyInOut = derive2 { name="photobiologyInOut"; version="0.4.13"; sha256="1zagvdaiv8d5frwki20wwvbyw4a9in3k8560janbmd161xh13ii0"; depends=[colorSpec dplyr hyperSpec lazyeval lubridate pavo photobiology readr readxl reshape2 tibble]; };
-  photobiologyLEDs = derive2 { name="photobiologyLEDs"; version="0.4.2"; sha256="0m8bwpvr3g0xdcpjg0pm5qp7b941y85gdzw24vc1nhfmzwd0lxn0"; depends=[photobiology]; };
+  photobiologyLEDs = derive2 { name="photobiologyLEDs"; version="0.4.3-1"; sha256="0inhl6ba1fzkak4752m60hkm6fzapzyz5kchvz18yv33dmm13v1c"; depends=[photobiology]; };
   photobiologyLamps = derive2 { name="photobiologyLamps"; version="0.4.1"; sha256="19pzb12qisv5hy7rps0dp9bq8zanpyr2yn41i6rd8hk80fknjha6"; depends=[photobiology]; };
   photobiologyPlants = derive2 { name="photobiologyPlants"; version="0.4.1"; sha256="0mpb5sv4wkvqzbhf193zkhap44yzlhxrnjx1p3j9iyjdg4bb1kka"; depends=[photobiology photobiologyWavebands]; };
   photobiologyWavebands = derive2 { name="photobiologyWavebands"; version="0.4.2"; sha256="0l1784xi9hzsxmiqipv0zkb4lq1xd9f890rzsgsjb0km6js5x3q7"; depends=[photobiology]; };
@@ -9048,8 +9231,9 @@ in with self; {
   phreeqc = derive2 { name="phreeqc"; version="3.3.10"; sha256="0hcdjj1wgfknqf5yx50b9vz5f72siw4dslyvk2xbrfnwbzzz4qib"; depends=[]; };
   phtt = derive2 { name="phtt"; version="3.1.2"; sha256="1fvvx5jilq5dlgh3qlfsjxr8jizy4k34a1g3lknfkmvn713ycp7v"; depends=[pspline]; };
   phuassess = derive2 { name="phuassess"; version="1.1"; sha256="0jplj9gih32dllx2hw5aqvc9b94sbrbv66s3a5r8mdbpjh93rhng"; depends=[]; };
+  phuse = derive2 { name="phuse"; version="0.1.5"; sha256="0cl36yxxhadg5rwdz3pxzqly52bv5510rr5ijyzb0x24l7zx6pjk"; depends=[git2r RCurl rlist shiny yaml]; };
   phybreak = derive2 { name="phybreak"; version="0.2.0"; sha256="0vapc0w308wv1cd72p2xbj3q7jfnxwp08g5g8855a38pcn3njbfg"; depends=[ape phangorn Rcpp stringr]; };
-  phyclust = derive2 { name="phyclust"; version="0.1-21"; sha256="14zv9m47af4fvl8fiadzmj01b2498jqchy3xc2aqvicz7friqzyi"; depends=[ape]; };
+  phyclust = derive2 { name="phyclust"; version="0.1-22"; sha256="0c3w1vafhcshnh5lkb6bykk6w7w91qigz3sf215zqmrra1acri0d"; depends=[ape]; };
   phyext2 = derive2 { name="phyext2"; version="0.0.4"; sha256="0j871kgqm9fll0vdgh071z77ib51y8pxxm0ssjszljvvpx1mb8rb"; depends=[ape phylobase]; };
   phylin = derive2 { name="phylin"; version="1.1.1"; sha256="1hxmh5jgcz41bhmi8kvimw0b6m4p3yq85bh79hl7xbx2kshxmvzq"; depends=[]; };
   phyloTop = derive2 { name="phyloTop"; version="2.1.0"; sha256="1a6r4fd2zv5napvdj2lqljccwsnd5mjkd1wzl18hvx7qzxvrna8c"; depends=[ape igraph NHPoisson phylobase]; };
@@ -9062,38 +9246,37 @@ in with self; {
   phylolm = derive2 { name="phylolm"; version="2.5"; sha256="0bffqzba6kcv8jyya7pja10mjnklhihczljhmj8q0pdrmd6qgqp8"; depends=[ape]; };
   phylometrics = derive2 { name="phylometrics"; version="0.0.1"; sha256="1pmr6l3wmaf91wdlsc5m63l07fibngnly2qzkma0rdi463ii03il"; depends=[mvtnorm]; };
   phylopath = derive2 { name="phylopath"; version="1.0.0"; sha256="1n6f7piygps3pwqapsvqpz764995kxhdqz1hc5n6znvl01ykdqx5"; depends=[ape dplyr ggm ggplot2 ggraph igraph MuMIn pbapply phylolm purrr tibble tidyr]; };
-  phylosignal = derive2 { name="phylosignal"; version="1.1"; sha256="039sdb5cyijsrvj13xznr0j7vcp780lif62xk5x5hpzxvpg1wwgk"; depends=[adephylo ape boot igraph phylobase Rcpp RcppArmadillo RCurl]; };
+  phylosignal = derive2 { name="phylosignal"; version="1.2"; sha256="0apsg4v1n58wn8y8wnl6x1ahl903i29hh8bs2dw6ky2jafkjj4jb"; depends=[adephylo ape boot DBI igraph phylobase Rcpp RcppArmadillo]; };
   phylosim = derive2 { name="phylosim"; version="3.0.2"; sha256="148zm43cgdhr264ffcabjx4abykks07jix6lypqysqy25fbmdngk"; depends=[ape compoisson ggplot2 R_methodsS3 R_oo]; };
-  phylotate = derive2 { name="phylotate"; version="1.1"; sha256="1lj7v05iblac2y9xggzbdm6hy99jzf60src5h3dwx3s8lm3490qm"; depends=[]; };
-  phylotools = derive2 { name="phylotools"; version="0.1.2"; sha256="19w7xzk6sk1g9br7vwv338nvszzh0lk5rdzf0khiywka31bbsjyb"; depends=[ape fields picante seqRFLP spaa]; };
+  phylotate = derive2 { name="phylotate"; version="1.2"; sha256="19nssrdax5w5a50159j39jgs7305s48k3h56ivyzs5di6l7x1yxj"; depends=[]; };
+  phylotools = derive2 { name="phylotools"; version="0.2.2"; sha256="1dhk1ncp5zi4zl1xfnjz64v983dm7bq7iimfjin80j0bdcpps44w"; depends=[ape]; };
   phyndr = derive2 { name="phyndr"; version="0.1.0"; sha256="03y3j4ik6flrksqm2dwh2cihn12hzfdik0fsak4zbxjdzaqn5gim"; depends=[ape]; };
   phyreg = derive2 { name="phyreg"; version="0.7"; sha256="0saynhq4yvd4x2xaljcsfmqk7da2jq3jqk26fm9qivg900z4kf35"; depends=[]; };
   physiology = derive2 { name="physiology"; version="0.2.2"; sha256="0z394smbnmlrnp9ms5vjczc3avrcn5nxm8np5y58k86x470w6npz"; depends=[]; };
   phytools = derive2 { name="phytools"; version="0.6-44"; sha256="1y815pv1cksj244vcb7q4qr45gzr4cb1qwi166h65ryggywcj48w"; depends=[animation ape clusterGeneration coda combinat maps MASS mnormt msm nlme numDeriv phangorn plotrix scatterplot3d]; };
   phytotools = derive2 { name="phytotools"; version="1.0"; sha256="049znviv2vvzv23biy1l28axm7bc7biwmq4bnn0cnjqgkk48ysz3"; depends=[FME insol]; };
-  pi0 = derive2 { name="pi0"; version="1.4-1"; sha256="09sjcmc6d45b7c7zfq150ncpyqsy3qkq2g88kv52csi7kwl7828n"; depends=[Iso kernlab limSolve LowRankQP Matrix numDeriv quadprog qvalue scatterplot3d]; };
   picante = derive2 { name="picante"; version="1.6-2"; sha256="1zxpd8kh3ay6f3gdqkij1a6vnkr98dc1jib2r6br2kjyzshabcsd"; depends=[ape nlme vegan]; };
-  picasso = derive2 { name="picasso"; version="1.0.1"; sha256="03108gga5a5r6cqi1c8l6n2bj81rg32277pdg6ja6d2n2c7pyah6"; depends=[MASS Matrix]; };
+  picasso = derive2 { name="picasso"; version="1.2.0"; sha256="1bclrv0g2frdw6bfqacjbbzn9vg3354i2bh5zn6hkix7r8rqymzg"; depends=[MASS Matrix]; };
   pid = derive2 { name="pid"; version="0.36"; sha256="1w6h09ddq8rv7k5xl4v6nhlkm0vnmim57mg0dzk2dv9dc4v8i141"; depends=[DoE_base FrF2 ggplot2 png]; };
   piecewiseSEM = derive2 { name="piecewiseSEM"; version="1.2.1"; sha256="0c705ngyj2pf24vvqdld5rnf875pw64gs64l9f7nylbfrax39kbv"; depends=[lavaan lme4 nlme pbkrtest]; };
   pifpaf = derive2 { name="pifpaf"; version="1.0.1"; sha256="0wj1fbhd871fnw7fjlbh0gdjz848mbwl1bzjp3cgmh9s7jnd2kci"; depends=[ggplot2 gridExtra MASS matrixcalc numDeriv sfsmisc]; };
-  pillar = derive2 { name="pillar"; version="1.0.1"; sha256="0z972rvlasrjnni3wg4xfc01bcxcg3kdbsa9dwpby2xbp6d1hdvv"; depends=[cli crayon rlang utf8]; };
+  pillar = derive2 { name="pillar"; version="1.1.0"; sha256="1gh3j2pbbf5y4d5nyqnlr0x27jjyvjjspcccmw61airs1n6rx8jq"; depends=[cli crayon rlang utf8]; };
   pim = derive2 { name="pim"; version="2.0.1"; sha256="1m804clxc8m4nyzi4hhfy118527lgf2sb7589qd61fb83yh6hi8p"; depends=[BB nleqslv]; };
-  pinbasic = derive2 { name="pinbasic"; version="1.1.0"; sha256="0ncbgkpgzp6w856y7ab0drci92rc9mx0j900vxd8ir69c00cm348"; depends=[fastcluster ggplot2 lubridate Rcpp reshape2 scales]; };
+  pinbasic = derive2 { name="pinbasic"; version="1.2.0"; sha256="1sn4q9g2pw8z6gyxi302bd7p578ldy1g6419w56z7jgv7m8n7g73"; depends=[fastcluster ggplot2 lubridate Rcpp reshape2 scales]; };
   pinfsc50 = derive2 { name="pinfsc50"; version="1.1.0"; sha256="1fja8xdqwsm4g223wmb2yg5fqmsg94hchzjd4qrqah1zb8vbdfdn"; depends=[]; };
   pingr = derive2 { name="pingr"; version="1.1.2"; sha256="17fh2gjlmwy6wy8i24q76fivjig8jm05g9kvfz81q0h6b5zxnpmg"; depends=[]; };
-  pinnacle_API = derive2 { name="pinnacle.API"; version="2.0.9"; sha256="1pq7q2wa4g8gxbyiascygnng53ihwmf5hsazwbyzjqgyyhi0hd9m"; depends=[data_table httr jsonlite magrittr openssl purrr rjson uuid]; };
+  pinnacle_API = derive2 { name="pinnacle.API"; version="2.3.3"; sha256="1b6adns1xr3cgcj2mdjvl16cm2vjjgsj2l8m2c47plyc5jh05qmb"; depends=[data_table httr jsonlite magrittr openssl purrr rjson uuid]; };
   pinnacle_data = derive2 { name="pinnacle.data"; version="0.1.4"; sha256="1sl36i2857b3xwx7iwgy8mkgjvz7nfa74ch1n8kcxbj59ib7mp8p"; depends=[tibble]; };
   pinp = derive2 { name="pinp"; version="0.0.4"; sha256="1bjvhq9glrahknh46irfpg83wilpws923mm5l4aldb75xrbpliyw"; depends=[knitr rmarkdown]; };
-  pinyin = derive2 { name="pinyin"; version="1.1.0"; sha256="15zv8rqz61a52pv47b0cdmmnm8ynb30ypyki7dprpdidrz3mhk8m"; depends=[]; };
   pipe_design = derive2 { name="pipe.design"; version="0.5.1"; sha256="0r0szkdzifxmnnbr6675w8ij4zwqgxj3gwahc7a74mxr51f7qh8j"; depends=[ggplot2 gtools xtable]; };
-  pipeGS = derive2 { name="pipeGS"; version="0.3"; sha256="0azbxhnxnj3ljndyd58qrh4rvvrgg77npy6l8fjbbjd92yfnrvd2"; depends=[]; };
+  pipeGS = derive2 { name="pipeGS"; version="0.4"; sha256="0ki4i70r5f195b4jfv3hxlxz3zj57mhy2yf4984bwr11impilz5w"; depends=[]; };
   pipeR = derive2 { name="pipeR"; version="0.6.1.3"; sha256="16lj227x24pviqb4dcrj7a55l31p5mm0cbwsb6m3y3n6k5wcd2nh"; depends=[]; };
   pipefittr = derive2 { name="pipefittr"; version="0.1.2"; sha256="0pzd7f0rhn0rydncki666zlajdwyiay3apa17cb0xy5454d99mvh"; depends=[magrittr miniUI rstudioapi shiny stringr]; };
   pipeliner = derive2 { name="pipeliner"; version="0.1.1"; sha256="1cyyd1bin89dh0zrhic3i541bj8nnaphg6jq2jqkhnxn2nvax11g"; depends=[]; };
   pirate = derive2 { name="pirate"; version="1.0.0"; sha256="160mmyqdwbc4g7n7q9i4xcqp6h9bcpcz7vavsgdcpvs2mjfhfpjx"; depends=[ggplot2 MASS plyr Rcpp RcppArmadillo]; };
   pitchRx = derive2 { name="pitchRx"; version="1.8.2"; sha256="0lg0xab40r8wzrww986l5q9jkg1m83g4bhsbh0kr7f2rv90av662"; depends=[ggplot2 hexbin MASS mgcv plyr XML2R]; };
   piton = derive2 { name="piton"; version="0.1.1"; sha256="1265y4lv2m5nwrh25sahjkxwmivpxgh9shrdidlmaman7zs6cclr"; depends=[Rcpp]; };
+  pivotaltrackR = derive2 { name="pivotaltrackR"; version="0.1.0"; sha256="024srncm288mn3bz6hv7ljzkchmnljk4yc2d4z7i05vsn7dzd2c6"; depends=[curl httr]; };
   pivottabler = derive2 { name="pivottabler"; version="0.4.0"; sha256="1q7gmfrqx3sn32q9rrr0y3hywq0fvm5gs5d3jj6mqcbs53jqvzqc"; depends=[data_table dplyr htmltools htmlwidgets jsonlite R6]; };
   pixels = derive2 { name="pixels"; version="0.1.0"; sha256="0lna0z2shs49kh48ipjnyigaa22wb9gm4mq970ldhh9msb7wcv55"; depends=[htmlwidgets miniUI shiny]; };
   pixiedust = derive2 { name="pixiedust"; version="0.8.1"; sha256="1cpxsh3y9k66mkmks7mn3q4zjix1i8jc0dl62wrwwsp379vxcc3r"; depends=[broom checkmate dplyr Hmisc htmltools knitr magrittr scales stringr tidyr]; };
@@ -9112,7 +9295,6 @@ in with self; {
   placement = derive2 { name="placement"; version="0.1.1"; sha256="1narjb90sb5prvzfv2x30bz8y9aq8hqggza91ghwi47m99vm1dg6"; depends=[base64enc digest jsonlite RCurl stringi urltools]; };
   plan = derive2 { name="plan"; version="0.4-2"; sha256="0vwiv8gcjdbnsxd8zqf0j1yh6gvbzm0b5kr7m47ha9z64d7wxch6"; depends=[]; };
   planar = derive2 { name="planar"; version="1.6"; sha256="0x5xdb2afpc1w8s217hy765mz938kg5b5j7vzqzhlsh2dzdjccpj"; depends=[cubature dielectric ggplot2 plyr Rcpp RcppArmadillo reshape2 statmod]; };
-  planor = derive2 { name="planor"; version="1.3-7"; sha256="01qlfv33adf3qyg6yzpigr4mm891xix39z8nkfz5d9q9iyx6fmx6"; depends=[bit64 conf_design Rcpp RcppArmadillo]; };
   plantecophys = derive2 { name="plantecophys"; version="1.3-2"; sha256="1jj9rkhdmcnmp6fzbxmkfwmsdx2w7v923rv0xn5c5iv7wys7vwfm"; depends=[]; };
   plaqr = derive2 { name="plaqr"; version="2.0"; sha256="15pdb57123m3cahvcsyrrvxjwxvs2f389yxip91gjxn68jf6cx1l"; depends=[quantreg]; };
   plater = derive2 { name="plater"; version="1.0.1"; sha256="0v5b9r6iha18qvrjpbr1p8fy06nf31x63ch5cnb4axyqa0x5skpp"; depends=[dplyr]; };
@@ -9143,14 +9325,14 @@ in with self; {
   plotmo = derive2 { name="plotmo"; version="3.3.4"; sha256="1j2nc6n5kv6zvxwlr1cr1shxdcihw7d5k7z0a90phmdp834x8agy"; depends=[plotrix TeachingDemos]; };
   plotpc = derive2 { name="plotpc"; version="1.0.4"; sha256="1sf7n7mfyaijldm24bc8r8pfm8pp9cyaja7am14z2wpj2j9f9vyq"; depends=[]; };
   plotprotein = derive2 { name="plotprotein"; version="1.0"; sha256="14kfb4xxpfp8klz31kb7cpc39636ax2cx2483vqqkciccb28f0ks"; depends=[ade4 plotrix plyr seqinr XML]; };
-  plotrix = derive2 { name="plotrix"; version="3.6-6"; sha256="07hywp3ym0gbpqdj3f4vhr0bhmynhby8vh6p1b9cm2hv26pzs9q4"; depends=[]; };
-  plotrr = derive2 { name="plotrr"; version="0.2.0"; sha256="12kab7w32hcdqmwh3nfpk1zqkgnvpx3p0292w47643ahl26s9whj"; depends=[dplyr ggplot2]; };
+  plotrix = derive2 { name="plotrix"; version="3.7"; sha256="0rw81n9p3d2i03b4pgcfj5blryc94f29bm9a4j9bnp5h8qjj6pry"; depends=[]; };
+  plotrr = derive2 { name="plotrr"; version="1.0.0"; sha256="07ilqpa3ypqb2gpnq23r9v4kkfxz06mcak9si9adr9sf6c7gqwxz"; depends=[dplyr ggplot2]; };
   plotwidgets = derive2 { name="plotwidgets"; version="0.4"; sha256="1w7c9grw4pyyra230196yq32snr4wdg6xi8vh4dx5df2v500wz22"; depends=[]; };
   pls = derive2 { name="pls"; version="2.6-0"; sha256="15j59p5x0rkdrk7iqzkipsy50rsyjl31w8zxc4w3v1j5gzxhi1rx"; depends=[]; };
   plsRbeta = derive2 { name="plsRbeta"; version="0.2.0"; sha256="1b8yldz5nzw3gilv9wk79bxcqb0hrgsxi2cn6qlby5nf9b4zmzv8"; depends=[betareg boot Formula MASS mvtnorm plsdof plsRglm]; };
   plsRcox = derive2 { name="plsRcox"; version="1.7.2"; sha256="1c3ll13m27ndwlc9r79ilzl0i6cyp870x66swlbg6387whf7wn2r"; depends=[kernlab lars mixOmics pls plsRglm risksetROC rms survAUC survcomp survival]; };
   plsRglm = derive2 { name="plsRglm"; version="1.1.1"; sha256="1bx1pl1pv47z3yj3ngkd97j10v2h8jqiybcqbm3kvqhgqydm07rp"; depends=[bipartite boot car mvtnorm]; };
-  plsVarSel = derive2 { name="plsVarSel"; version="0.9.3"; sha256="1albqmyr3pb808rlwrfyqm79flc2lliwy7ni67wakrdgdfmpxfdl"; depends=[bdsmatrix genalg MASS mvtnorm pls progress]; };
+  plsVarSel = derive2 { name="plsVarSel"; version="0.9.4"; sha256="19xz7ds4jx5ql999mwn9zs983rlshf14y4nlah8cfy9gpi0vl1g1"; depends=[bdsmatrix genalg MASS mvtnorm pls progress]; };
   plsdepot = derive2 { name="plsdepot"; version="0.1.17"; sha256="1i00wxr451xpfy6dnvcm11aqf9106jsh5hj7gpds22ysgm4iq5w4"; depends=[]; };
   plsdof = derive2 { name="plsdof"; version="0.2-7"; sha256="1z8z9m0nsnyy1fipzvm1srpxn3q6wjrlivmmki1f8plwkixkyc5y"; depends=[MASS]; };
   plsgenomics = derive2 { name="plsgenomics"; version="1.5-1"; sha256="0d2k3h2cwwhcv7mbxqypd7g6yp1l6j32n3wslm348zmcx50j9pn4"; depends=[boot fields MASS plyr reshape2 RhpcBLASctl]; };
@@ -9159,17 +9341,19 @@ in with self; {
   plspolychaos = derive2 { name="plspolychaos"; version="1.1-1"; sha256="078arfv8z5nfrmsfi0n7hskmv394ysi6nhlskpy5cg37lqiwh0r1"; depends=[lhs MASS]; };
   pltesim = derive2 { name="pltesim"; version="1.0"; sha256="0mvqp8di2gwhd9wc9kvnnpxd3hkr9b9lj6g5qlkqcbrgkq6fjahs"; depends=[coreSim ggplot2]; };
   plugdensity = derive2 { name="plugdensity"; version="0.8-3"; sha256="1jdmq4kbs8yzgkf9f5dc7c8c52ia68fgavw7nsnc2hnz5ylw1qy9"; depends=[]; };
-  plumber = derive2 { name="plumber"; version="0.4.2"; sha256="0ralab3hqz22hcd4rvi82dshsvic1qfnl631s2fcr8saddw8ki8n"; depends=[crayon httpuv jsonlite R6 stringi]; };
+  plumber = derive2 { name="plumber"; version="0.4.4"; sha256="0fxbqp7x74x21dkkxklg7j0020pmvl9byfs9lgp1bxrnli84h6ik"; depends=[crayon httpuv jsonlite R6 stringi]; };
   plumbr = derive2 { name="plumbr"; version="0.6.9"; sha256="1avbclblqfy57pd72ximvj3zq92q1w8vszvyf6fw75j5rfwdaibk"; depends=[objectSignals]; };
   plus = derive2 { name="plus"; version="1.0"; sha256="1l7lvnq7vahj8m7knmr4q3wj00ar7iq89j45a2dqn2bh0qyj68ls"; depends=[]; };
   plusser = derive2 { name="plusser"; version="0.4-0"; sha256="1g100dh8cvn9q09j0jbkw4xmwjdp1lm4651369975fm99nrlp1j9"; depends=[lubridate plyr RCurl RJSONIO]; };
   plyr = derive2 { name="plyr"; version="1.8.4"; sha256="1igar5pcjqh0jyxv0z3jah8rz617vfa86vw0r5c7c031b7bj5db0"; depends=[Rcpp]; };
+  pmap = derive2 { name="pmap"; version="0.3.2"; sha256="0mg3h4j0icnl58844b04vgl3yi18j92457da7s7cx79w0a2zpcsq"; depends=[data_table DiagrammeR dplyr stringr]; };
+  pmatch = derive2 { name="pmatch"; version="0.1.1"; sha256="1vksygllism4dbdds3r5gikxjrq4mg9s21k3srpq05jk4s3j2xgh"; depends=[dplyr glue purrr rlang tibble]; };
   pmc = derive2 { name="pmc"; version="1.0.2"; sha256="1pamxg2cwyg36w0xnggrv5w03lb12l25z2da7xm1jvr17h0ipqmh"; depends=[dplyr geiger ggplot2 ouch tidyr]; };
   pmcgd = derive2 { name="pmcgd"; version="1.1"; sha256="1pybzvyjmzpcnxrjsas06diy3x83i1r5491s6ccyr63l56hs55d5"; depends=[mixture mnormt]; };
-  pmclust = derive2 { name="pmclust"; version="0.1-9"; sha256="1p506d3gs0i46zjdia0pc71wwfv6nrfkmk5qaan5sdz6vn24zjhj"; depends=[MASS pbdBASE pbdDMAT pbdMPI]; };
+  pmclust = derive2 { name="pmclust"; version="0.2-0"; sha256="1bpfix76ylmn5ds6y0v40mfad7znaa6dj5ngr4mzv96yy6mg13ns"; depends=[MASS pbdBASE pbdDMAT pbdMPI]; };
   pmhtutorial = derive2 { name="pmhtutorial"; version="1.2"; sha256="1dviqazdk3ggxwwyv20409w3qadka0gbcgviwyywssn2x4cg0vih"; depends=[mvtnorm Quandl]; };
   pmlr = derive2 { name="pmlr"; version="1.0"; sha256="1z3hbw4wabpai1q8kbn77nzxqziag8y04cidlfiw7z969s4pkmgl"; depends=[]; };
-  pmml = derive2 { name="pmml"; version="1.5.3"; sha256="0hgmayydfcnw6w8jmcmx35y306s3s8ggnzcxpb1svkax0zr8h4d1"; depends=[stringr XML]; };
+  pmml = derive2 { name="pmml"; version="1.5.4"; sha256="1acld1x0z5rgyxb5id071s3zvf2vbv4b9nngvxrb63ay3yyy124b"; depends=[stringr XML]; };
   pmmlTransformations = derive2 { name="pmmlTransformations"; version="1.3.1"; sha256="1cxmp3fgsf3z71v6qpd9l9ilgda5knan7vqifxpgm8m7a30sp3f3"; depends=[]; };
   pmr = derive2 { name="pmr"; version="1.2.5"; sha256="0dq97dfjmgxlhr3a2n20vyyzfmamcicw878hdxpw31lw02xs6yls"; depends=[]; };
   png = derive2 { name="png"; version="0.1-7"; sha256="0g2mcp55lvvpx4kd3mn225mpbxqcq73wy5qx8b4lyf04iybgysg2"; depends=[]; };
@@ -9177,12 +9361,11 @@ in with self; {
   pnn = derive2 { name="pnn"; version="1.0.1"; sha256="1s6ib60sbdas4720hrsr5lsszsa474kfblqcalsb56c84gkl42ka"; depends=[]; };
   poLCA = derive2 { name="poLCA"; version="1.4.1"; sha256="0bknnndcxsnlq6z9k1vbhqiib1mlzlx4badz85kc7a3xbrdrfs9f"; depends=[MASS scatterplot3d]; };
   pocrm = derive2 { name="pocrm"; version="0.9"; sha256="0p7a7xm1iyyjgzyi7ik2n34gqc3lsnallrijzdakghb8k5cybm4m"; depends=[dfcrm nnet]; };
-  pogit = derive2 { name="pogit"; version="1.1.0"; sha256="145dh48scxx4wcdr2g7548vg4g03w1ji7hz91752im9a27v7s4pa"; depends=[BayesLogit ggplot2 logistf plyr]; };
   poibin = derive2 { name="poibin"; version="1.2"; sha256="12dm1kdalbqy8k7dfldf89v6zw6nd0f73gcdx32xbmry2l2976sa"; depends=[]; };
   poilog = derive2 { name="poilog"; version="0.4"; sha256="0bg03rd5rn4rbdpiv87i8lamhs5m7n7cj8qf48wpnirg6jpdxggs"; depends=[]; };
   pointRes = derive2 { name="pointRes"; version="1.1.3"; sha256="0yfzidc93ghpf116lxbx4fr0d71wl79y3nz6mkirx4pli6gb8x8d"; depends=[ggplot2 gridExtra plyr TripleR]; };
   pointblank = derive2 { name="pointblank"; version="0.1"; sha256="11v0x264065iljhv77m4yc44zqd0i9bg95c6qiv8d85nf97201hh"; depends=[digest dplyr Hmisc htmltools knitr lazyWeave lubridate magrittr mailR pixiedust purrr readr rJava rlang rmarkdown stringr tibble tidyr]; };
-  pointdensityP = derive2 { name="pointdensityP"; version="0.2.1"; sha256="013vamdh987w56bmz0m6j2xas4ycv1zwxs860rs5z4i55dhgf9kh"; depends=[]; };
+  pointdensityP = derive2 { name="pointdensityP"; version="0.3.2"; sha256="1wi1lv5y589vmibvzigpqk0m9k5m265brhnz520g7wa4h3wpsdq3"; depends=[data_table]; };
   poio = derive2 { name="poio"; version="0.0-3"; sha256="1smbnqjlicaqq2hswl910yiirzb9zikbk4pqxm9pwpixywj0nkys"; depends=[assertive_base assertive_files assertive_properties assertive_sets assertive_strings assertive_types devtools digest dplyr magrittr R6 stringi tibble whoami]; };
   poisDoubleSamp = derive2 { name="poisDoubleSamp"; version="1.1"; sha256="13wyj9jf161218y4zjv2haavlmanihp9l59cvh7x8pfr9dh2dwr8"; depends=[Rcpp]; };
   poisbinom = derive2 { name="poisbinom"; version="1.0.1"; sha256="0mjxg0s3nck7qrmq4bbrhwxfwr6fqml54s9k8q1mkfzlifa7qyf7"; depends=[Rcpp]; };
@@ -9192,13 +9375,13 @@ in with self; {
   poker = derive2 { name="poker"; version="0.8.8"; sha256="14ik77440z22k4kwq0p1fn7adzi0p8mh8j8hd7ayinvrab4b5r85"; depends=[]; };
   polidata = derive2 { name="polidata"; version="0.1.0"; sha256="07641v0dnn161kyxx7viplkf8c3r51hd4hd5pzmcph4y4387r01i"; depends=[jsonlite RCurl]; };
   poliscidata = derive2 { name="poliscidata"; version="1.2.0"; sha256="0vn9wdlh3bi24mcq0r4ani2b0hhlg1za1z6fw8ikz7952gpacqk8"; depends=[abind car descr ENmisc gplots Hmisc plotrix plyr survey weights xtable]; };
-  politeness = derive2 { name="politeness"; version="0.1.1"; sha256="1pfl8x23zwbaqpy687f3xjmvdpgvggm6ylajyarfirh2v8jzj7ga"; depends=[data_table ggplot2 glmnet quanteda ROCR spacyr stringr textir tm]; };
+  politeness = derive2 { name="politeness"; version="0.2.2"; sha256="06h4g9xbk5dbaqzhybqc0mppa61ypb7ryi6hghqnqyj32y8r6dbr"; depends=[data_table ggplot2 glmnet quanteda spacyr stringr textir tm]; };
   pollen = derive2 { name="pollen"; version="0.53.00"; sha256="0gkmy5g16794zrr21g6yap0k4xl1bvsq5npyivsdflvvrg985nzw"; depends=[dplyr lubridate purrr]; };
   pollstR = derive2 { name="pollstR"; version="2.0.0"; sha256="0lcxhi1mazs8nh9hbbqyqx4axn5lji5fnp0kxrjwjxmzf59nksj8"; depends=[httr lubridate purrr stringr]; };
   polmineR = derive2 { name="polmineR"; version="0.7.5"; sha256="0yz2c915jrf3dqadi6px9jidfwr4jd23rjrpas4xg4m6dx0f70jm"; depends=[data_table DT jsonlite Matrix pbapply R6 slam tm]; };
   polspline = derive2 { name="polspline"; version="1.1.12"; sha256="0chg5f6fq5ngjp1kkm4kjyxjc3kk83ky2ky5k7q3rhd8rkhd4szw"; depends=[]; };
   polyCub = derive2 { name="polyCub"; version="0.6.1"; sha256="16nr83gmv6pnk89nqxh8ihzacb0y8l4lz05c8sp6whmr26ja9vnf"; depends=[sp]; };
-  polyPK = derive2 { name="polyPK"; version="2.0.0"; sha256="0fkhqib036w2ycskbwv669r7fy82gnn0b99ww0w5kx3d9b2xvzfl"; depends=[circlize corrplot gplots Hmisc impute imputeLCMD missForest mixOmics pcaMethods PKNCA plyr ropls samr sqldf xlsx]; };
+  polyPK = derive2 { name="polyPK"; version="3.0.0"; sha256="1vdfsad2b9habvm2ikjgn7ihnm851q9lqmgqjlsl737ka1vsgisf"; depends=[circlize corrplot gplots Hmisc impute imputeLCMD mixOmics pcaMethods pkr plyr ropls samr sqldf xlsx]; };
   polySegratio = derive2 { name="polySegratio"; version="0.2-4"; sha256="05kvj475zhlrmp7rm691cfs28igp4ac2cn2xxf7axx09v1nq33db"; depends=[gdata]; };
   polySegratioMM = derive2 { name="polySegratioMM"; version="0.6-3"; sha256="1y4kzb1p3aw7ng8mv1hszpvb5hwwxy4vg34mhhk705ki4jy8jgvp"; depends=[coda gtools lattice polySegratio]; };
   polyaAeppli = derive2 { name="polyaAeppli"; version="2.0"; sha256="0kyz3ap92xz7aqyviyrpggfmicy1gybrx7y19djsmixcwz53zqch"; depends=[]; };
@@ -9207,12 +9390,14 @@ in with self; {
   polyclip = derive2 { name="polyclip"; version="1.6-1"; sha256="07xxw5ik30ds18kv808hynzmz3w351k6lj4ifz9kak0s7xsaqfn3"; depends=[]; };
   polycor = derive2 { name="polycor"; version="0.7-9"; sha256="0d0756faksviic5jrc47fg6l3wsm9r2wlbnxiw08563rv7shbvb7"; depends=[Matrix mvtnorm]; };
   polyfreqs = derive2 { name="polyfreqs"; version="1.0.2"; sha256="13859vbpys5yj1qiapyzv9wlvi6x6k0rm335bsi1v07ch3x2bh3b"; depends=[Rcpp]; };
+  polymapR = derive2 { name="polymapR"; version="1.0.13"; sha256="18bwi149y2622bdcyb5gcq0mxwalg6dsv3dgsnx2km4kd5x1a4ck"; depends=[combinat doParallel foreach igraph knitr Matrix MDSMap]; };
   polynom = derive2 { name="polynom"; version="1.3-9"; sha256="1s4xxv5rvpigawknvq27v9vzvs83phfsj5h8mim2lmf5bj950nnk"; depends=[]; };
   polypoly = derive2 { name="polypoly"; version="0.0.2"; sha256="00c1hrnf575awvh0rlsnf6nkgi9p3fnqhd1knamkgb4icwi5s46d"; depends=[ggplot2 reshape2 rlang tibble]; };
   polysat = derive2 { name="polysat"; version="1.7-2"; sha256="0ahx2pvlv2vdfiskwgawcrp447249ha0dq4qkhav3hpyvdg3in38"; depends=[]; };
   polywog = derive2 { name="polywog"; version="0.4-0"; sha256="0wl9br0g4kgi3nz2fq28nsk6fw0ll0y715v4vz8lv3pvfwc7518j"; depends=[foreach Formula glmnet iterators Matrix miscTools ncvreg Rcpp stringr]; };
   pom = derive2 { name="pom"; version="1.1"; sha256="02jv19apn0kmp1ric2cxajlaad2fmsz4nm4izd2c3691vzas7l83"; depends=[matrixcalc]; };
-  pomp = derive2 { name="pomp"; version="1.15"; sha256="1cba1wj1af7rb3ng8lm1m7zbvcjspak4ppz36ix5hbs956mxi8ss"; depends=[coda deSolve digest mvtnorm nloptr subplex]; };
+  pomp = derive2 { name="pomp"; version="1.16"; sha256="1ns1ygza76dqrrscm7ajv3pbf5wgvcfsfbjxc20b50z30zjm7712"; depends=[coda deSolve digest mvtnorm nloptr subplex]; };
+  pompom = derive2 { name="pompom"; version="0.1.4"; sha256="0j37gq6lfccypclhrp7w3yfgsjbhfgqwg7x87r6rgywz6b3fnsgh"; depends=[ggplot2 lavaan qgraph reshape2]; };
   pooh = derive2 { name="pooh"; version="0.3-2"; sha256="0qwa5j91aypasvsf4xcfbl6lz7llawdr38jiflzmfak2ad72rv7j"; depends=[]; };
   pool = derive2 { name="pool"; version="0.1.3"; sha256="0ca51zi6nx62dlrg0156a6iilrfmvq6hz6hx83qrd5g7wmjmpkrp"; depends=[DBI dbplyr dplyr later R6]; };
   pop = derive2 { name="pop"; version="0.1"; sha256="0hbxdrkasb69x7ipddvyrzl5vvc7dd6rzj1vy7v3chg3rzgq89cj"; depends=[igraph MASS]; };
@@ -9223,12 +9408,13 @@ in with self; {
   popReconstruct = derive2 { name="popReconstruct"; version="1.0-4"; sha256="14lp0hfnzbiw81fnq7gzpr4lxyfh3g0428rm9jwjh631irz3fcc9"; depends=[coda]; };
   popbio = derive2 { name="popbio"; version="2.4.3"; sha256="1c34izyp6gpic3yv1rhg1snv2irw0bj9r1w9b892l7x0mxxmn2bl"; depends=[]; };
   popdemo = derive2 { name="popdemo"; version="0.2-3"; sha256="0r3qdvwjwqzqxk3zp9vfzxwmc5fhjzn0ka91b37g62nanwxiyayw"; depends=[expm]; };
+  popkin = derive2 { name="popkin"; version="1.0.5"; sha256="147ic0d7cgs4x9vz4jm4wd6ckikn0s8a0q1mknmcrcfisq8zim75"; depends=[RColorBrewer Rcpp RcppEigen]; };
   poplite = derive2 { name="poplite"; version="0.99.19"; sha256="0y1l21clp9b5m50chqnqmvyd6rsk6xgn2bqf1877gx3h1qidh5fm"; depends=[DBI dbplyr dplyr igraph lazyeval RSQLite]; };
-  poppr = derive2 { name="poppr"; version="2.5.0"; sha256="18r89wdad8yja8jgdvispwx67ssj26yf2rdd1j4x0w9r3cpxxkmm"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas phangorn rlang shiny vegan]; };
+  poppr = derive2 { name="poppr"; version="2.6.1"; sha256="1ib6z5rpx8xr5wfvjiy56fn9vgjda4d7x16n6wn4377b5fi4l3zp"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas phangorn rlang shiny vegan]; };
   popprxl = derive2 { name="popprxl"; version="0.1.3"; sha256="1l842zgn04s8ghbcp8s2lzg7lgc809xd7hg9crnyp23c2cr0jlvi"; depends=[poppr readxl]; };
   popsom = derive2 { name="popsom"; version="4.2"; sha256="11d6z3qsq94k0557pnwa0h4pc718360lvg9jkblp8abnj52lcvvv"; depends=[class fields ggplot2 som]; };
   poptrend = derive2 { name="poptrend"; version="0.1.0"; sha256="0hypxpb18azg6q1mqrphbx3x262h9ybwhlkb8fyd6vr7jjb5wn3h"; depends=[mgcv]; };
-  population = derive2 { name="population"; version="0.1"; sha256="1xcm38hipasf6x5grsn7dqayy2g5mwppx2dvi5lwax5a6dqjk792"; depends=[abind]; };
+  population = derive2 { name="population"; version="0.2"; sha256="1k0hwh17dyfbbyw8gprsz1klx6l2ncq5mxkmnjmknlnrkpah0bbl"; depends=[abind]; };
   portes = derive2 { name="portes"; version="2.1-4"; sha256="09liy2bia76h5dh21s8skq9pj8k4wpq5agwrmr1pnvlpgc8m2b60"; depends=[]; };
   portfolio = derive2 { name="portfolio"; version="0.4-7"; sha256="0gs1a4qh68xsvl7yi6mz67lamwlqyqjbljpyax795piv46kkm06p"; depends=[lattice nlme]; };
   portfolioSim = derive2 { name="portfolioSim"; version="0.2-7"; sha256="1vf46882ys06ia6gfiibxx1b1g81xrg0zzman9hvsj4iky3pwbar"; depends=[lattice portfolio]; };
@@ -9242,13 +9428,15 @@ in with self; {
   powerCompRisk = derive2 { name="powerCompRisk"; version="0.1.1"; sha256="0qsgibjzf6qx778s126c2k7nbf8f10gsh4cfkkhkxcv344rqxg10"; depends=[MASS mvtnorm]; };
   powerEQTL = derive2 { name="powerEQTL"; version="0.1.3"; sha256="1045vkzl5p20mqlsm0j6vnyyvfz5v6jyy443c38sw1cps0a09i1n"; depends=[powerMediation]; };
   powerGWASinteraction = derive2 { name="powerGWASinteraction"; version="1.1.3"; sha256="1i8gfsk9qzx54yn661i4x9k7n7b6r1jd808wv1hcq7870mzyb27k"; depends=[mvtnorm pwr]; };
-  powerMediation = derive2 { name="powerMediation"; version="0.2.8"; sha256="1mfsap5li6limmr9pfv98wgsnx7a23abjx067vrvg0s5m03v52yi"; depends=[]; };
-  powerSurvEpi = derive2 { name="powerSurvEpi"; version="0.0.9"; sha256="0f8i867zc1yjdp66rjb1cp92fcfrlq167z3d0c4iv355wv4s35az"; depends=[survival]; };
+  powerMediation = derive2 { name="powerMediation"; version="0.2.9"; sha256="1rk8h8qn4b68ra5h5hiy9fvvbpskj9y806rwrvl1l7gs7xlmji7l"; depends=[]; };
+  powerSurvEpi = derive2 { name="powerSurvEpi"; version="0.1.0"; sha256="1xxicvw113mc2y889rklws3xml5z64sgjpn4wg95gbw6nadch7zz"; depends=[survival]; };
   powerbydesign = derive2 { name="powerbydesign"; version="1.0.3"; sha256="0dv4j0kwdzvxnq587vs1dsy2yci3v3q2smncpscpcsalp38rvx4i"; depends=[gdata ggplot2 lme4 MASS plyr reshape2 stringr]; };
   powerlmm = derive2 { name="powerlmm"; version="0.1.0"; sha256="0fsd3h94va5hn0nqxdalchw02s4daxq8dlgdxb5a4nigg64lfkm2"; depends=[ggplot2 ggsci gridExtra lme4 lmerTest MASS Matrix pbmcapply scales testthat]; };
   powerpkg = derive2 { name="powerpkg"; version="1.5"; sha256="0mbk2fda2fvyp1h5lk5b1fg398xybbjv0z6kdx7w7xj345misf7l"; depends=[]; };
   powerplus = derive2 { name="powerplus"; version="3.1"; sha256="0ayp6x34hkzgris4j3zbbs0r23n81bhww3wgfyy630ri4sk6brrn"; depends=[complexplus expm MASS Matrix phonTools]; };
+  ppcSpatial = derive2 { name="ppcSpatial"; version="0.1.0"; sha256="0dcp94g5b2wcw388z100kaz8m48xxzi9rjaypj9pdjx3mwh0bxmj"; depends=[dplyr ggplot2 htmltools htmlwidgets leaflet magrittr PakPC2017 rgdal scales shiny tidyr tmap]; };
   ppcc = derive2 { name="ppcc"; version="1.0"; sha256="022c8w7ws7fw6yy572rn6m8ki14d2ph7nd2hk2c6mmx2c4lbc20v"; depends=[]; };
+  ppclust = derive2 { name="ppclust"; version="0.1.1"; sha256="10fcyayda634lg5g992g21casqx5k0jni9r30km5rczzib7cz9gg"; depends=[inaparc MASS]; };
   ppcor = derive2 { name="ppcor"; version="1.1"; sha256="1x9b2kb8s0bp92b17gby0jwzzr3i4cf3ap9c4nq7m8fav72g0y3a"; depends=[MASS]; };
   ppiPre = derive2 { name="ppiPre"; version="1.9"; sha256="07k2mriyz1wmxb5gka0637q4pmvnmd1j16mnkkdrsx252klgjsdw"; depends=[AnnotationDbi e1071 GO_db GOSemSim igraph]; };
   ppls = derive2 { name="ppls"; version="1.6-1"; sha256="1r3h4pf79bkzpqdvyg33nwjabsqfv7r8a4ziq2zwx5vvm7mdy7pd"; depends=[MASS]; };
@@ -9257,18 +9445,18 @@ in with self; {
   pqantimalarials = derive2 { name="pqantimalarials"; version="0.2"; sha256="0azxkf1rvk9cyzr4gbp4y2vcxrxw3d4f002d5gjkvv1f4kx8faw1"; depends=[plyr RColorBrewer reshape2 shiny]; };
   prLogistic = derive2 { name="prLogistic"; version="1.2"; sha256="1abwz7nqkz2qbyqyr603kl9a3rkad3f4vxhck6a9kl80xrmfrj9s"; depends=[boot Hmisc lme4]; };
   prabclus = derive2 { name="prabclus"; version="2.2-6"; sha256="0qjsxrx6yv338bxm4ki0w9h8hind1l98abdrz828588bwj02jya1"; depends=[MASS mclust]; };
-  pracma = derive2 { name="pracma"; version="2.1.1"; sha256="1mylrrkyycaw9m01mmg6xkn5wgdlabs5l0qyws60r0n2ycblp897"; depends=[]; };
+  pracma = derive2 { name="pracma"; version="2.1.4"; sha256="1ygm81i7mqvh229dp9935djjyb120p3bqvaf4k572sa4q63fzjhc"; depends=[]; };
   pragma = derive2 { name="pragma"; version="0.1.3"; sha256="1n30a346pph4d8cj4p4qx2l6fnwhkxa8yxdisx47pix376ljpjfx"; depends=[]; };
   prais = derive2 { name="prais"; version="0.1.1"; sha256="0vv6h12gsbipi0gnq0w6xh6qvnvc0ydn341g1gnn3zc2n7cx8zcn"; depends=[]; };
   praise = derive2 { name="praise"; version="1.0.0"; sha256="1gfyypnvmih97p2r0php9qa39grzqpsdbq5g0fdsbpq5zms5w0sw"; depends=[]; };
   praktikum = derive2 { name="praktikum"; version="0.1"; sha256="0kkydgglvqw371fxh46fi86fmdndhwq1n8qj0ynbh2gz1cn86aw1"; depends=[]; };
-  praznik = derive2 { name="praznik"; version="1.0.0"; sha256="0n8bjar7s5d6ylw78nyf2p41wz57mh43mq2zscajqzpcw5z0nmvc"; depends=[]; };
-  prc = derive2 { name="prc"; version="2015.6-24"; sha256="0sf664zqcq6xylhd7rvm2l2xj3f4j6llaj7j4b4847wfxnas2j02"; depends=[kyotil nlme]; };
+  praznik = derive2 { name="praznik"; version="3.0.0"; sha256="0fxs7nvpg8vifc5x48g1lr7cpi0v24rnl28fjiwq5730hypmm8nj"; depends=[]; };
+  prc = derive2 { name="prc"; version="2018.1-31"; sha256="0xvf1f202qwpjb1kh469jk45l592q7bfzngyi8ifry94bi7mphp7"; depends=[kyotil nlme]; };
   prcbench = derive2 { name="prcbench"; version="0.7.3"; sha256="0xdmwjhxpcdaiqawhmlpr4ddlx22xk3rywa70jpm1vk5hc9pwivk"; depends=[assertthat ggplot2 gridExtra memoise precrec PRROC R6 rJava ROCR]; };
   prclust = derive2 { name="prclust"; version="1.3"; sha256="0p0sf8248aigs99py8mpzz743jnrf7n1nv5shag15arxz9yx7zn3"; depends=[Rcpp]; };
   prcr = derive2 { name="prcr"; version="0.1.5"; sha256="1hfr0jijnj5nd25rh16i81bsz8kwz0q9vmn7bqgy467cwvypg9k2"; depends=[class dplyr ggplot2 irr lpSolve purrr tibble tidyr]; };
-  pre = derive2 { name="pre"; version="0.4"; sha256="0az0dfmzfzin7zbbgqzg8y6f6dajj2y88dddlzy3rav580n3dvwg"; depends=[earth Formula glmnet MatrixModels partykit stringr]; };
-  preText = derive2 { name="preText"; version="0.6.1"; sha256="0lh67rpjx8v36kis22yp22c79kgzqv0lan6cpzdj53m625zmdbaj"; depends=[cowplot ecodist ggplot2 proxy quanteda reshape2 topicmodels vegan]; };
+  pre = derive2 { name="pre"; version="0.4-1"; sha256="1pcc8njy43pfpszrgs782fgwsnh8h990giq8q7ra6vvwyhgza8m3"; depends=[earth Formula glmnet MatrixModels partykit stringr]; };
+  preText = derive2 { name="preText"; version="0.6.2"; sha256="0pcnqssv542cfajzrqfsbq0jf628nnmcb3nryvd7d5wk4wdkji4q"; depends=[cowplot ecodist ggplot2 proxy quanteda reshape2 topicmodels vegan]; };
   precintcon = derive2 { name="precintcon"; version="2.3.0"; sha256="1sf0mfqa77aqhbx3hg8pv582ibmfnv6vigqcd3xqsbq7nigy2ms9"; depends=[ggplot2 scales]; };
   precrec = derive2 { name="precrec"; version="0.9.1"; sha256="0kppl4x8ji8hzll5wss1nzlk8qvf4g78f14x4c2b8dcxjikgl939"; depends=[assertthat data_table ggplot2 gridExtra Rcpp]; };
   predatory = derive2 { name="predatory"; version="1.2"; sha256="1qbkifx16ixzimshm8lsg3d1y7cj453ksn8cpwy03xql6b19r8x4"; depends=[readr stringr]; };
@@ -9290,8 +9478,8 @@ in with self; {
   preseqR = derive2 { name="preseqR"; version="3.1.2"; sha256="0xafl51yc0y8rxwz3cc0a6mjv7ajgn8bzpynxgmkb3gjx0jla5kp"; depends=[polynom]; };
   prettyGraphs = derive2 { name="prettyGraphs"; version="2.1.5"; sha256="19jag5cymancxy5lvkj5mkhdbxr37pciqj4vdvmxr82mvw3d75m4"; depends=[]; };
   prettyR = derive2 { name="prettyR"; version="2.2"; sha256="026cgbrqs799lg06qlwx1r9ramil790qxrb1cyl4w7mzf8sfpgn9"; depends=[]; };
-  prettycode = derive2 { name="prettycode"; version="1.0.0"; sha256="1zba83b5sk8jyag8jz8gipn6qpxwfsfg1xcxamfvpmzjicajzhbx"; depends=[crayon withr]; };
-  prettydoc = derive2 { name="prettydoc"; version="0.2.0"; sha256="1zpvi4lyjazhj2h6m3j46x93s9c2300xqylaqy6gp1yjn9im36dp"; depends=[rmarkdown]; };
+  prettycode = derive2 { name="prettycode"; version="1.0.1"; sha256="0iw38q5yx92m71wrbp52d14bl3nqwpjrd57l2w9chasmlrjnl2aw"; depends=[crayon withr]; };
+  prettydoc = derive2 { name="prettydoc"; version="0.2.1"; sha256="00amqn0izg2jrn96pmm5papqmp0chn25msjk94nim3avqg9x4x92"; depends=[rmarkdown]; };
   prettymapr = derive2 { name="prettymapr"; version="0.2.2"; sha256="151jp0l728krmxcyzwjh01mvd1zhqijq0nsgjaqsh0q8n3jmndi0"; depends=[digest httr plyr rjson]; };
   prettyunits = derive2 { name="prettyunits"; version="1.0.2"; sha256="0p3z42hnk53x7ky4d1dr2brf7p8gv3agxr71i99m01n2hq2ri91m"; depends=[assertthat magrittr]; };
   prevR = derive2 { name="prevR"; version="3.3"; sha256="11syifnv0mgbybsphgaj3a2j29p2q0l4y4w008n2r9s359arjj8m"; depends=[directlabels fields foreign GenKern ggplot2 gstat maptools rgdal sp]; };
@@ -9313,11 +9501,11 @@ in with self; {
   proPubBills = derive2 { name="proPubBills"; version="0.1"; sha256="1fpn9x31jjahdyk0f30mbb3ijj4dsghrq9q94r04pjsgr2jw23zx"; depends=[dplyr httr stringr]; };
   probFDA = derive2 { name="probFDA"; version="1.0.1"; sha256="093k50kyady54rkrz0n9x9z98z5ws36phlj42j25yip7pzhfd6sv"; depends=[MASS]; };
   probemod = derive2 { name="probemod"; version="0.2.1"; sha256="1cgjr03amssc9rng8ky4w3abhhijj0d2byzm118dfdjzrgmnrf9g"; depends=[]; };
-  probout = derive2 { name="probout"; version="1.0"; sha256="05mmy4cy8a7v5j3adbsy8qyzgy6nqkv5mp577071wavp7889kmc6"; depends=[FNN MASS mclust]; };
+  probout = derive2 { name="probout"; version="1.1.1"; sha256="1hasrvxdig8n3fhzsbmq27050dyanzp1j0qlybnrkb41k9gyljda"; depends=[FNN MASS mclust]; };
   probsvm = derive2 { name="probsvm"; version="1.00"; sha256="1k0zysym7ncmjy9h7whwi49qsfkpxfk7chfdjrydl6hn6pscis37"; depends=[kernlab]; };
   proccalibrad = derive2 { name="proccalibrad"; version="0.14"; sha256="0vr55rpcqh9wvy3bklssrimp42x85w3sanjgshfij657v68vmx46"; depends=[]; };
   processcontrol = derive2 { name="processcontrol"; version="0.1.0"; sha256="0c0bksgq24blfkdgp5bn49sjnaajrg5bag8qzb5zffxbhnm4s30x"; depends=[plyr]; };
-  processmapR = derive2 { name="processmapR"; version="0.2.0"; sha256="02gj8h30bmz02qhr2xw6b72sa872cn57blszhw1llfmk7ml1zys2"; depends=[bupaR data_table DiagrammeR dplyr edeaR ggplot2 ggthemes glue miniUI purrr shiny stringr]; };
+  processmapR = derive2 { name="processmapR"; version="0.2.1"; sha256="0qlz6av6f0ik62md0wa5il3id55rnbwc6i34sxjhv9awwvm2ygrv"; depends=[bupaR data_table DiagrammeR dplyr edeaR forcats ggplot2 ggthemes glue hms miniUI plotly purrr RColorBrewer rlang scales shiny stringr]; };
   processmonitR = derive2 { name="processmonitR"; version="0.1.0"; sha256="1ckr438yifpsh095j6bb65dq3rdm7cfm8k7qsjmcqwjkww4j74z8"; depends=[bupaR dplyr edeaR ggplot2 magrittr miniUI shiny]; };
   processx = derive2 { name="processx"; version="2.0.0.1"; sha256="0yw23lp9xjvbpswzghkmjiayw7p19hbvmgv58k3i6b8g5nav4qcg"; depends=[assertthat crayon debugme R6]; };
   prodest = derive2 { name="prodest"; version="0.1.1"; sha256="1j8gqxswwvnd45givadlvblnsc3qli228gz77d7alc19qf1wrrvz"; depends=[DEoptim dplyr Matrix Rsolnp]; };
@@ -9327,27 +9515,30 @@ in with self; {
   productplots = derive2 { name="productplots"; version="0.1.1"; sha256="1igs6d0qwgsfk0z3vxabgv5kva9w2kpzi535gjfdrbx34j4pf3gx"; depends=[ggplot2 plyr]; };
   prof_tree = derive2 { name="prof.tree"; version="0.1.0"; sha256="0mjvxaacrgkzl0f1wn3fpgah4jh720safni66ri0dnriwcxis6rz"; depends=[data_tree]; };
   profdpm = derive2 { name="profdpm"; version="3.3"; sha256="07lhjavrx4fa5950w928mfpddmmnmvdapl5n6mv49m8h3bxs4nmy"; depends=[]; };
+  profile = derive2 { name="profile"; version="1.0"; sha256="0m7fm490gqkbmnbdq3lac87zqb9qyx6546rlpa130rq1jnlgxfp6"; depends=[rlang tibble withr]; };
   profileModel = derive2 { name="profileModel"; version="0.5-9"; sha256="1p9b9jr5842im195d60ja82pp7vbk85vs8b0r3fnf62j4b92aky9"; depends=[]; };
   profileR = derive2 { name="profileR"; version="0.3-4"; sha256="1vinqddhd4jbncn37rbypja7ili3kwmj2sacgf491s94zil4ijik"; depends=[ggplot2 lavaan RColorBrewer reshape]; };
   profilr = derive2 { name="profilr"; version="0.1.0"; sha256="0rw5cjvvrgsdmhgrsaw4skfdk8h488b6mkmibgjj3dd3x0j3caq6"; depends=[]; };
-  profmem = derive2 { name="profmem"; version="0.4.0"; sha256="1nnk145hzr447z9frk3c58xks3jp0cdl7cv8schqnyjxqlv967g9"; depends=[]; };
+  profmem = derive2 { name="profmem"; version="0.5.0"; sha256="152dka39p9i17ydlhc92y6x6i8girn3wab1ycbqb9kva07j9d2h8"; depends=[]; };
   profr = derive2 { name="profr"; version="0.3.1"; sha256="1w06mm89apggy6wc273b2nsp95smajr8sf3dwshykivv7mhkxs5d"; depends=[plyr stringr]; };
   proftools = derive2 { name="proftools"; version="0.99-2"; sha256="1vx0270sgx15dl6x3nnx13v5y4c0m18yvrhiycl429zky0jzxfr0"; depends=[]; };
-  profvis = derive2 { name="profvis"; version="0.3.3"; sha256="0lj4cr9jkbnvb4876kzkwy8gzrw2flbbwb0gw744f4q0240zybs6"; depends=[htmlwidgets stringr]; };
+  profvis = derive2 { name="profvis"; version="0.3.4"; sha256="0kx184gxhacnhk6kfj650v4a5bzlgfwls7y9rn813diyg60xbmzh"; depends=[htmlwidgets stringr]; };
   progenyClust = derive2 { name="progenyClust"; version="1.2"; sha256="0azp5pvk316s8xbawcqwqfd80fxb4xn8hc6aq87xwksc6fhwp94l"; depends=[Hmisc]; };
   prognosticROC = derive2 { name="prognosticROC"; version="0.7"; sha256="0lscsyll41hpfzihdavygdzqw9xxjp48dmy4i17qsx5h01jl1h4i"; depends=[survival]; };
   progress = derive2 { name="progress"; version="1.1.2"; sha256="1fxakchfjr5vj59s9sxynd7crpz97xj42438rmkhkf3rjpyspx59"; depends=[prettyunits R6]; };
   proj4 = derive2 { name="proj4"; version="1.0-8"; sha256="06r3lavgixrsa52d1v31laqcbw6fb9xn23akv39hvaib78diglv9"; depends=[]; };
+  projections = derive2 { name="projections"; version="0.0.1"; sha256="1qrgazxdihzp1i4aghkwkh6q5g1all39bvd83gwh4hj9pxm2w5zy"; depends=[distcrete ggplot2 incidence]; };
   projector = derive2 { name="projector"; version="0.0.1"; sha256="0l3nfy5s3xj4cl96h74ss6ndpir33kk3gj4q1fjd5invx6f75spx"; depends=[assertthat dbscan plotly RColorBrewer RcppAnnoy Rtsne shiny shinyjs shinythemes]; };
   projmanr = derive2 { name="projmanr"; version="0.1.0"; sha256="0mfp1b00a5ndw7011q3jivxm8bsykm6q7pm7dplmqffgs0p3drvv"; depends=[ggplot2 igraph R6 tidyr]; };
-  promote = derive2 { name="promote"; version="1.0.0"; sha256="0jqb314c5a1j2784k0i9dgblr1zp11bqk4l6play5nlp47nb0sli"; depends=[httr jsonlite stringr]; };
+  projpred = derive2 { name="projpred"; version="0.7.0"; sha256="1n2lwzc3hvjr4d6csc2nqlxqcrr979h52lfvbr81alybkg1nbqch"; depends=[ggplot2 loo Rcpp RcppArmadillo rstan rstanarm]; };
+  promote = derive2 { name="promote"; version="1.0.1"; sha256="1f8f5rm25fx4146hf3rds2lb7qpfz17fa5r2a1f4s3q5p86svgqn"; depends=[httr jsonlite stringr]; };
   prop_comb_RR = derive2 { name="prop.comb.RR"; version="1.2"; sha256="10s52fkq7rv6v4gw1yd46f0fbg89ksim0qhgb5jbglzrqh585ny5"; depends=[rootSolve]; };
   propOverlap = derive2 { name="propOverlap"; version="1.0"; sha256="0q72z9vbkpll4i3wy3fq06rz97in2cm3jjnvl6p9w8qc44zjlcyl"; depends=[Biobase]; };
-  propagate = derive2 { name="propagate"; version="1.0-4"; sha256="18vyh4i4zlsmggfyd4w0zrznk75m84k08p1qa9crind04n5581j1"; depends=[ff MASS minpack_lm Rcpp tmvtnorm]; };
+  propagate = derive2 { name="propagate"; version="1.0-5"; sha256="168ya3a74fjqwl9bzsb3ywzypb90h8snymgvxryrx7plrfcmwlav"; depends=[ff MASS minpack_lm Rcpp tmvtnorm]; };
   properties = derive2 { name="properties"; version="0.0-8"; sha256="1x7zln1indckl090p9kv40snamkac3b8q45387jdqxajmsallxmb"; depends=[]; };
   prophet = derive2 { name="prophet"; version="0.2.1"; sha256="10qd3w9jgk3d53465005b0di2lxa6cg67lj81fzmf2h919ai9i5m"; depends=[dplyr extraDistr ggplot2 Rcpp rstan scales tidyr]; };
   proportion = derive2 { name="proportion"; version="2.0.0"; sha256="0a71f6hz6blb7550m9x0di84vp51yjhnn952301rwlrh3axf6dbr"; depends=[ggplot2 TeachingDemos]; };
-  propr = derive2 { name="propr"; version="3.1.1"; sha256="09dqq93k4xnp4mv6j5vrn1w4z38bc73q082hhkifipn17q415dbx"; depends=[fastcluster ggplot2 igraph Rcpp]; };
+  propr = derive2 { name="propr"; version="3.1.4"; sha256="1hggj926zphhg6v09bbrv77rp11bg6vciy3xfnkqi2hakjw3ak59"; depends=[fastcluster ggplot2 igraph Rcpp]; };
   prospectr = derive2 { name="prospectr"; version="0.1.3"; sha256="18lh03xg6bgzsdsl56bjd63xdp16sqgr3s326sgifkkak8ffbv7q"; depends=[foreach iterators Rcpp RcppArmadillo]; };
   protViz = derive2 { name="protViz"; version="0.2.45"; sha256="0mvq0p0lnxwpia1znyizha5gdj6f9i07nghp3gv9kfficlq3fw03"; depends=[Rcpp]; };
   proteomicdesign = derive2 { name="proteomicdesign"; version="2.0"; sha256="01s47pgwxy4xx10f3qmbfv59gbaj0qw017kpkpsn33s8w7ad63r0"; depends=[MASS]; };
@@ -9361,10 +9552,11 @@ in with self; {
   prototest = derive2 { name="prototest"; version="1.1"; sha256="0v65abrn73wgwnrrf6gv9f7p0qy12xlk9ishq9lq4qal1wlsrrjs"; depends=[glmnet intervals MASS Rcpp RcppArmadillo]; };
   protr = derive2 { name="protr"; version="1.5-0"; sha256="1mi14hph6cqdsgjw4p00miaa4bh2axkwfcmxaiv7f7v4dk8i52y1"; depends=[]; };
   proustr = derive2 { name="proustr"; version="0.2.1"; sha256="17syaxfrwm9kh5q825hj7bsrvi4h9avpdabw9y0vq20y87w8cq1s"; depends=[assertthat dplyr magrittr purrr rlang SnowballC stringr tidyr tokenizers]; };
-  provenance = derive2 { name="provenance"; version="1.8"; sha256="0mf1bdpi6hp4djy63zknnnz68g50sr68p40yzz3q3lqvjgj2akqj"; depends=[MASS]; };
-  proxy = derive2 { name="proxy"; version="0.4-19"; sha256="0ladwgi70jw2a3adgg2xadw8hz3mm6llsw428c1fcrl305sy49vb"; depends=[]; };
+  provenance = derive2 { name="provenance"; version="1.9"; sha256="1d40k85cxnnxy480ylvy6wwswgf8hbxgcbansx90hyg9cb3rvhil"; depends=[MASS]; };
+  proxy = derive2 { name="proxy"; version="0.4-21"; sha256="1vih8gsfzv97h5c8ixd1qjnn02i7fzla2p9fdj2wpisqhx0p0xv0"; depends=[]; };
   prozor = derive2 { name="prozor"; version="0.2.3"; sha256="1686lfmzmzl1488xnppv95hfr83gf67xfzqsw49gdas0aba3plhh"; depends=[AhoCorasickTrie doParallel foreach Matrix plyr seqinr stringr]; };
-  pryr = derive2 { name="pryr"; version="0.1.3"; sha256="1b1rcywq9sqzgjsnh3ynnx16gp41n94kkzfalm3y4kyy3ls8ikba"; depends=[codetools Rcpp stringr]; };
+  prrd = derive2 { name="prrd"; version="0.0.2"; sha256="0ifs55yqvwbcs3xyc90yi763fgavdhajk1ba73g1kchn2ak39qhb"; depends=[config crayon data_table DBI liteq RSQLite]; };
+  pryr = derive2 { name="pryr"; version="0.1.4"; sha256="06vj5xl9x37kbd3l5bw7sbgfdnp37spvrjrn976rxi04clqk966k"; depends=[codetools Rcpp stringr]; };
   psData = derive2 { name="psData"; version="0.2.2"; sha256="013hb6lk9rm2w08m5jbw90ndrcd4wyy2h125jx07c9bs60wh4mp4"; depends=[countrycode DataCombine reshape2 rio xlsx]; };
   psbcGroup = derive2 { name="psbcGroup"; version="1.4"; sha256="0l1hmgw4sislryws8hv7r2nglhcs6g9khg0372a70djvhz2l6gfi"; depends=[LearnBayes mvtnorm SuppDists]; };
   pscl = derive2 { name="pscl"; version="1.5.2"; sha256="1phf3awsfr4ncqfqzin5m1pz0g7y1zhbcm2sz7358ssw914fd7rc"; depends=[MASS]; };
@@ -9374,7 +9566,6 @@ in with self; {
   pse = derive2 { name="pse"; version="0.4.7"; sha256="0kigfzsvx3gw7jwym4f19dydwwarwxgmha7hpy54gg0zzi4k9icl"; depends=[boot Hmisc]; };
   pseudo = derive2 { name="pseudo"; version="1.4.3"; sha256="0ccf3gz2g7g5y4acpj2qnb39hrghhdganizlddg6rx7al869fffs"; depends=[geepack KMsurv]; };
   pseval = derive2 { name="pseval"; version="1.3.0"; sha256="1iv3fa7ar9i7v9j5axbasmn8l8nvry4zvmb7fd8aql82f22szmbj"; depends=[survival]; };
-  psgp = derive2 { name="psgp"; version="0.3-6"; sha256="0h9gyadfy0djj32pgwhg8vy2gfn7i7yj5nnsm6pvfypc3k71s2wf"; depends=[automap gstat intamap Rcpp RcppArmadillo]; };
   psidR = derive2 { name="psidR"; version="1.4"; sha256="1whdjsab5cihlq4gp06xafl3zg7z0cjb4622d23v24igz7kr0ic2"; depends=[data_table foreign RCurl SAScii]; };
   pso = derive2 { name="pso"; version="1.0.3"; sha256="0alar695c6kc1rsvwipsrvlxc93f3sy9l0yhp0mggyqgxkkvy406"; depends=[]; };
   psoptim = derive2 { name="psoptim"; version="1.0"; sha256="1yziabkd3h05cfl5jy5l8ji2y3w21acvxsq3inxyh0iwyr8qdkkl"; depends=[]; };
@@ -9384,8 +9575,8 @@ in with self; {
   pstest = derive2 { name="pstest"; version="0.1.1"; sha256="0k8413ilpbz23v210wz80mli7ajpc8p7y4pbn1za371qw04b81c5"; depends=[harvestr]; };
   psy = derive2 { name="psy"; version="1.1"; sha256="027whr670w65pf8f7x0vfk9wmadl6nn2idyi6z971069lf01wdlk"; depends=[]; };
   psych = derive2 { name="psych"; version="1.7.8"; sha256="0daismb8pdk392vdy304hqx0m3jx62gx3a0hygjygc125rhfla7k"; depends=[foreign lattice mnormt nlme]; };
-  psychmeta = derive2 { name="psychmeta"; version="0.1.2"; sha256="117qw86iz3k3vpxvmsabw3m0y53rpbl9xxr0qwl7zlqfylyf0mhz"; depends=[boot dplyr ggplot2 MASS metafor nor1mix reshape2 tibble tmvtnorm]; };
-  psycho = derive2 { name="psycho"; version="0.0.2"; sha256="0673zfscqfkj1pjhnibmp1wgpigw6vd4zva5vmsgix62wk9456f4"; depends=[corrplot dplyr ggplot2 lmerTest MuMIn ppcor psych purrr rstanarm rtf tidyr tidyverse]; };
+  psychmeta = derive2 { name="psychmeta"; version="0.2.3"; sha256="0lfgsbvb1dplwbxfqim3q7lnf4sclngdik1l5cxl9rkdwb54lcy6"; depends=[boot dplyr fungible ggplot2 MASS metafor nor1mix progress reshape2 rtf tibble tidyr tmvtnorm]; };
+  psycho = derive2 { name="psycho"; version="0.1.0"; sha256="0qfgq5sivr01jiglaykh3jqjz11zag8si1nmw0ffr28bp94gibrg"; depends=[dplyr ggcorrplot ggplot2 lmerTest MASS MuMIn nFactors ppcor psych purrr qgraph rstanarm stringr tidyr]; };
   psychometric = derive2 { name="psychometric"; version="2.2"; sha256="1b7cx6icixh8k3bv60fqxjjks23qn09vlcimqfv2x3m3nkf8p1s9"; depends=[multilevel nlme]; };
   psychomix = derive2 { name="psychomix"; version="1.1-4"; sha256="15yk3z11w4bzk6vljr13bkfhzycypww6blc1djb5iwl635xq1c49"; depends=[flexmix Formula lattice modeltools psychotools]; };
   psychotools = derive2 { name="psychotools"; version="0.4-2"; sha256="04p5yb39c8j28q6brqsrw0dr1zvgpyzb7008v2kk3d5sncgl4dd0"; depends=[]; };
@@ -9398,10 +9589,9 @@ in with self; {
   ptw = derive2 { name="ptw"; version="1.9-12"; sha256="111b0s66p7fk6z6bnm3wckpfjxr1gshv0rqqy5wy6qg60hp7bcfd"; depends=[nloptr]; };
   ptwikiwords = derive2 { name="ptwikiwords"; version="0.0.3"; sha256="129dad1vy52sf97dqrkwa49vjhv2kvs4pmd5zvq8pxd51hqm6wy9"; depends=[]; };
   ptycho = derive2 { name="ptycho"; version="1.1-4"; sha256="1llk3rpk0lf80vwvs23d6dqhgyic3a6sfjc393csj69hh01nrdvc"; depends=[coda plyr reshape2]; };
+  pubh = derive2 { name="pubh"; version="0.1.7"; sha256="0dha3adlbrxgkamlb5i2lcnqcsspqb30fmj0f2zhz0bh4i83lznb"; depends=[bookdown car descr Epi epiR epitools gee lattice latticeExtra lme4 lmtest MASS multcomp nlme nnet ordinal pander papeR rmdformats sandwich survival visreg]; };
   pubmed_mineR = derive2 { name="pubmed.mineR"; version="1.0.11"; sha256="01b4dd28x3a25d0s8k0dwbcr6asaqh2b9c4fddg683i54q483lkd"; depends=[boot R2HTML RCurl XML]; };
-  pubprint = derive2 { name="pubprint"; version="0.2.1"; sha256="0lcav93i4lw0j491q8ga47iyski2kvmqvppq0jwa3144zfb3hnic"; depends=[stringr]; };
   pullword = derive2 { name="pullword"; version="0.2"; sha256="14rln0nbd4k2cvf18iwvc56776b9g3m3cs67i7fgzabfrgj8y6db"; depends=[RCurl]; };
-  pulsar = derive2 { name="pulsar"; version="0.2.5"; sha256="1qmyhj32dygnvqvjysvlhlxv9y8lyfnm8hzaycmh8g3lhymk2k9c"; depends=[Matrix]; };
   pulver = derive2 { name="pulver"; version="0.1.1"; sha256="0zj3a66hjing4a87lvhxlvdp72kpn0s2d6r5kc0pi06ls04r8sax"; depends=[DatABEL Rcpp]; };
   pumilioR = derive2 { name="pumilioR"; version="1.3.1"; sha256="1791r5lkr6hafd2rz9f9nfy5vc03c4833f292khvd2cg43sb0bfc"; depends=[RCurl XML]; };
   purge = derive2 { name="purge"; version="0.2.1"; sha256="1faf8mkaxsnj63wnig5rs50hd3j6vzaj0xkdz8kn0j7y2vvshp9p"; depends=[]; };
@@ -9416,6 +9606,7 @@ in with self; {
   pwr = derive2 { name="pwr"; version="1.2-1"; sha256="0k3jzx7jjgzha3vkpknj9nvx4yqlc9rq0mw25shvzi0xbr1y2cdb"; depends=[]; };
   pwr2 = derive2 { name="pwr2"; version="1.0"; sha256="0zfv7z5yymw310r1sqm8ivsc2pv6dgk2k4b1axmm92gsaj53cn7p"; depends=[]; };
   pwrAB = derive2 { name="pwrAB"; version="0.1.0"; sha256="0ifyw40m9gsijw3vm9qb8qk4yydmdixfdpdp45x2hk93j8v61jm1"; depends=[]; };
+  pwrFDR = derive2 { name="pwrFDR"; version="1.85"; sha256="1al8dh5h32lipnqfa823wwx7nsrz8z3fadl7hz4qvj8vpfijpz1i"; depends=[]; };
   pwrRasch = derive2 { name="pwrRasch"; version="0.1-2"; sha256="13fr4yfk8aky1vv36pllx673l4lg9q7i661vbyn2zabyizd2rw3b"; depends=[]; };
   pwt = derive2 { name="pwt"; version="7.1-1"; sha256="0926viwmwldmzlzbnjfijh00wrhgb0h4h0mlrls71pi5pjfldifa"; depends=[]; };
   pwt8 = derive2 { name="pwt8"; version="8.1-1"; sha256="1iig0x90ilzh3hdki0h33qgrra8r94rw4bk1x8y7i6c1may8y0v6"; depends=[]; };
@@ -9424,6 +9615,7 @@ in with self; {
   pxweb = derive2 { name="pxweb"; version="0.6.3"; sha256="106nb0a3v295cam8ixhdwpgjhwq8p71c2z5c49s6xnqwmf6rbd0h"; depends=[data_table httr plyr RJSONIO stringr]; };
   pycno = derive2 { name="pycno"; version="1.2"; sha256="0ha5css95xb98dq6qk98gnp1al32gy6w5fkz74255vs4hmkwfzw2"; depends=[maptools rgeos sp]; };
   pyramid = derive2 { name="pyramid"; version="1.4"; sha256="0hh0hmckicl0r2r9zlf693j65jr9jgmiz643j2asp57nbs99lgxz"; depends=[]; };
+  qCBA = derive2 { name="qCBA"; version="0.3.1"; sha256="0lr97hig9c4l9k7vjalvgar4f1dic1lqf91li4q63j07lgdyvh4c"; depends=[arc arules rJava]; };
   qGaussian = derive2 { name="qGaussian"; version="0.1.6"; sha256="0j8n4y4yzidkp52db73zv2snx0kwpg3aiz7vr82ybq3x9scy8c4n"; depends=[Rcpp robustbase zipfR]; };
   qLearn = derive2 { name="qLearn"; version="1.0"; sha256="1ilxmgazm8gjz8c1hhbp4fccibnvnalxrag8b0rn081zsqmhf094"; depends=[]; };
   qPCR_CT = derive2 { name="qPCR.CT"; version="1.1"; sha256="19j41fsd2m7p2nxi2h2mj43rjxx6sz2jpf4sk0bfvl1gyj0iz3hi"; depends=[RColorBrewer]; };
@@ -9431,6 +9623,7 @@ in with self; {
   qap = derive2 { name="qap"; version="0.1-1"; sha256="0d2d1ni1camixyi45lfy00f4pn3p063k7bsi8gj5scp6n15mdgb0"; depends=[]; };
   qat = derive2 { name="qat"; version="0.74"; sha256="04n1jnbkf9dzafjh1n5d4q9p7hvyhnr63nmgl51jqxcf3nan5rlx"; depends=[boot fields gdata gplots moments ncdf4 XML]; };
   qboxplot = derive2 { name="qboxplot"; version="0.2"; sha256="07f05n7zxgwyxg2r5fz691ra64m218w9v874xfzjx6671c40y1q2"; depends=[]; };
+  qcQpcr = derive2 { name="qcQpcr"; version="1.5"; sha256="1298zla8z5w9z4idc07v3ca9rc1afx853y7iz3jmqnqnv8mr0s48"; depends=[ggplot2]; };
   qcc = derive2 { name="qcc"; version="2.7"; sha256="0lc26w7p3d023lfr8v6v75m2vwqg9vi9pdipap19l4vbdq29l4zz"; depends=[MASS]; };
   qclust = derive2 { name="qclust"; version="1.0"; sha256="0cxkk4lybpawyqmy5j6kkpgm0zy0gyn3brc1mf9jv8gmkl941cp3"; depends=[mclust mvtnorm]; };
   qcr = derive2 { name="qcr"; version="1.0"; sha256="1251naica44kccmikyzdi3ncxfmvyqbc4qspfqnc0w54cqpsy5rw"; depends=[fda_usc MASS mvtnorm qcc qualityTools]; };
@@ -9445,10 +9638,10 @@ in with self; {
   qgtools = derive2 { name="qgtools"; version="1.0"; sha256="0irqfaj2qqx7n1jfc0kmfpgzqrhwwlj0qizsmya94zk9d27bcpn5"; depends=[MASS Matrix]; };
   qha = derive2 { name="qha"; version="0.0.8"; sha256="0sdf6g6884wn73i237xkwszg2mq8xddhvyy225qzpplh5za4pnhl"; depends=[ade4 FactoClass FactoMineR]; };
   qicharts = derive2 { name="qicharts"; version="0.5.5"; sha256="0bl1f64b5n8q9jhzh3rqfyh9613qiy9mhcy2xsn16jyrj4hmj0jd"; depends=[ggplot2 lattice latticeExtra scales]; };
-  qicharts2 = derive2 { name="qicharts2"; version="0.2.0"; sha256="0z0qw62zqaarmf19yx1h9knlgkh7n8qa913fwns7s62izy944rph"; depends=[dplyr ggplot2 scales]; };
+  qicharts2 = derive2 { name="qicharts2"; version="0.3.0"; sha256="0z9ym2pzl1psqp67hd69vmq729xzdhr9lcrxk2dv387547xhf3h1"; depends=[dplyr ggplot2 scales]; };
   qiimer = derive2 { name="qiimer"; version="0.9.4"; sha256="0argspi9pin2gjsg0qkl28hj3bw8svfab1cy410zlq76qdnmg7df"; depends=[pheatmap]; };
   qiitr = derive2 { name="qiitr"; version="0.1.0"; sha256="1p0mcwgzvbib20l05wrnshkqx99vwr69dgy15dfwp75skyy5l797"; depends=[httr jsonlite purrr rstudioapi]; };
-  qlcData = derive2 { name="qlcData"; version="0.1.0"; sha256="00xfr7dywvadyhs2z32za06fzdzmm20sn31grin0b3xw5qndai0f"; depends=[stringi yaml]; };
+  qlcData = derive2 { name="qlcData"; version="0.2.1"; sha256="0n1r7462zmyzkyi7mp3hf7pn7bgw1m1zs9flm3n199kjm8f6yyzy"; depends=[ape data_tree docopt phytools shiny stringi yaml]; };
   qlcMatrix = derive2 { name="qlcMatrix"; version="0.9.5"; sha256="0fm49iydbjp264h9mkk8qfblbvg4l3bfcnphxyhcv3n27m0w44sf"; depends=[Matrix slam]; };
   qlcVisualize = derive2 { name="qlcVisualize"; version="0.1.0"; sha256="13rc4z7rz7vngrkxq09flhszvcbg6i7drdkdp8kmvgcxf0im6lv0"; depends=[alphahull fields mapdata mapplots maps maptools MASS qlcMatrix raster seriation sp spatstat]; };
   qle = derive2 { name="qle"; version="0.16-6"; sha256="1gah72vv7zfaxl2i9r58qzpkml7pkspxffd7jaf9z93izrzcsp74"; depends=[digest expm lhs mvtnorm nloptr]; };
@@ -9457,7 +9650,7 @@ in with self; {
   qmrparser = derive2 { name="qmrparser"; version="0.1.5"; sha256="0sl9n42j0dx9jqz5vv029ra6dyrg9v7mvdlya8ps3vyd6fjhwh0z"; depends=[]; };
   qpcR = derive2 { name="qpcR"; version="1.4-0"; sha256="029qhncfiicb3picay5yd42g6qi0x981r6mgd67vdx71cac9fp59"; depends=[MASS Matrix minpack_lm rgl robustbase]; };
   qqman = derive2 { name="qqman"; version="0.1.4"; sha256="1v9s9ag1hfb47py87wb2nad4mbsfx35832hdmrh5kxrb2f11zl1s"; depends=[calibrate]; };
-  qqplotr = derive2 { name="qqplotr"; version="0.0.1"; sha256="0npvl90gqw1graa8bvn0nijvj1klcr7vnsl8d8samanj3af8z7vb"; depends=[dplyr ggplot2 robustbase]; };
+  qqplotr = derive2 { name="qqplotr"; version="0.0.2"; sha256="1cfzs77labxsfqq3flqz40gihyaz4bsi9vhsx6qqgpl6v4iz0a2h"; depends=[dplyr ggplot2 knitr MASS robustbase]; };
   qqtest = derive2 { name="qqtest"; version="1.1.1"; sha256="08vfpbrgvyhv1w0gqmys9zkhfxh85sk74ig5fn12ma2p87zv7r5l"; depends=[robust]; };
   qqvases = derive2 { name="qqvases"; version="1.0.0"; sha256="1fli4v1slmnwcmzmmfw84sa4mx3xzv3im1q0plb8811sbsgmwdvl"; depends=[shiny shinythemes]; };
   qrLMM = derive2 { name="qrLMM"; version="1.3"; sha256="1k85d09yvhx3pgmvqrsmhd14hqaah4pdr87vp4kg60dp9w5sydjz"; depends=[ald ghyp matrixcalc mvtnorm psych quantreg]; };
@@ -9471,13 +9664,13 @@ in with self; {
   qrjoint = derive2 { name="qrjoint"; version="1.0-0"; sha256="18jmxb5wv16gy4vf0cgp4x885s53i3z3qmc46bdr4md513mc980w"; depends=[coda kernlab Matrix quantreg]; };
   qrmdata = derive2 { name="qrmdata"; version="2016-01-03-1"; sha256="192dcsmvl3xbzlk658cfp2sk5fkgbjhjd4g1mrcs8s63hmzbwdzc"; depends=[xts]; };
   qrmix = derive2 { name="qrmix"; version="0.9.0"; sha256="1r695d9bmmngvblh9jj0rnjymdaln9w0jywz51wla0bdssssf845"; depends=[MASS quantreg]; };
-  qrmtools = derive2 { name="qrmtools"; version="0.0-7"; sha256="0c624jsdf6ypnip8z0hsdvrby29cdd9gpyp19asprdwsrmymmy6h"; depends=[lattice Quandl quantmod rugarch xts zoo]; };
+  qrmtools = derive2 { name="qrmtools"; version="0.0-8"; sha256="111rhfaj2hwh2267y3y20wh9dxp0fj2m68j0hv4rmdslm2xwfjzq"; depends=[lattice Quandl quantmod rugarch xts zoo]; };
   qrng = derive2 { name="qrng"; version="0.0-3"; sha256="0xdhmcqvgjmrf4c72x76yz5kp0jiysy8q6f67lix1h4mvzr4q2qd"; depends=[]; };
-  qrnn = derive2 { name="qrnn"; version="1.1.3"; sha256="0phbazi47pzhvg7k3az958rk5dv7nk2wvbxqsanppxsvyxl0ykwf"; depends=[]; };
+  qrnn = derive2 { name="qrnn"; version="2.0.2"; sha256="0w4gzignkfrx220fk9j4by0ibr4r9s66il0f43k6abf0czvqdxx4"; depends=[]; };
   qrsvm = derive2 { name="qrsvm"; version="0.2.1"; sha256="0qpj3c8qwrwr2asvp921av0mbdba1ayz0pdq4a52i1waqng4fgis"; depends=[doParallel foreach kernlab Matrix quadprog]; };
   qtbase = derive2 { name="qtbase"; version="1.0.12"; sha256="0j3nzmh4xj0mzwlh9dsc3296yqbkhzn6qhzb8ismhi0bmx5hjydj"; depends=[]; };
   qte = derive2 { name="qte"; version="1.2.0"; sha256="1l911z52v3jp0b2agvwfny8d4yq0llrdp873j4mw696x50awj8py"; depends=[BMisc formula_tools ggplot2 Hmisc quantreg texreg]; };
-  qtl = derive2 { name="qtl"; version="1.41-6"; sha256="067az4v432zxp6lxck8d7vlh9w4r13r0mvw5zsglyaqwsh3d9sad"; depends=[]; };
+  qtl = derive2 { name="qtl"; version="1.42-8"; sha256="1l528dwvfpdlr05imrrm4rq32axp6hld9nqm6mm43kn5n7z2f5k6"; depends=[]; };
   qtlDesign = derive2 { name="qtlDesign"; version="0.941"; sha256="138yi85i5xiaqrns4v2hw46b731bdgnb301wg2h4cfrxvrw4l0d5"; depends=[]; };
   qtlbook = derive2 { name="qtlbook"; version="0.18-6"; sha256="0kbz7icp6fzl2bgk50fcg8x704aijpz3xbqrzraj7qa3z8gakaj6"; depends=[qtl]; };
   qtlc = derive2 { name="qtlc"; version="1.0"; sha256="17ij4alx4qg556b5kq7qsjygj5jf8iyx1f0v52pvx1z2sm6nppww"; depends=[plot3D rgl tiff]; };
@@ -9486,36 +9679,36 @@ in with self; {
   qtlmt = derive2 { name="qtlmt"; version="0.1-6"; sha256="023h60z8d05832l2g7mg776hfjb0i7xpvhz3i899rc3h5pgjd94c"; depends=[]; };
   qtlnet = derive2 { name="qtlnet"; version="1.3.6"; sha256="044a2p3mpp203kb85s2fr3qiyypm461lrzxkfi0hnzq44qqba169"; depends=[graph igraph pcalg qtl sem]; };
   qtpaint = derive2 { name="qtpaint"; version="0.9.1"; sha256="08x7qcxwkaclwv1p4s9a5k95x35hzp69whiihkakjv5blm83m3g9"; depends=[qtbase]; };
-  qtutils = derive2 { name="qtutils"; version="0.1-3"; sha256="018k9v3mab1mfcjh4mv1a1iish50fwdhb51mqn17k6fyrrrv7vs5"; depends=[qtbase]; };
   quad = derive2 { name="quad"; version="1.0"; sha256="0fak12l19f260k0ygh6zimx8dabzsv7a9i2njw8hnfcs3ndffhv5"; depends=[PearsonDS]; };
   quadmesh = derive2 { name="quadmesh"; version="0.1.0"; sha256="1k1midhszmi843krv9sdwbyhjmffgps0xx9aigkp7yw7mpif07vx"; depends=[dplyr raster]; };
   quadprog = derive2 { name="quadprog"; version="1.5-5"; sha256="0jg3r6abmhp8r9vkbhpx9ldjfw6vyl1m4c5vwlyjhk1mi03656fr"; depends=[]; };
-  quadprogXT = derive2 { name="quadprogXT"; version="0.0.1"; sha256="0q1yph4hri04i4k8rw5zpm60yc0irrb8nvxf0vipzd2chn4d9k6f"; depends=[quadprog]; };
+  quadprogXT = derive2 { name="quadprogXT"; version="0.0.2"; sha256="1yqcxpzahrmlyz1rsp3fgs1dsjf7y7lhp98ybpmlgpj6c9z2abcl"; depends=[quadprog]; };
   quadrupen = derive2 { name="quadrupen"; version="0.2-5"; sha256="193hn3yf6c5i3p4n8gpg78nvsf2jdlcw40mm4p2ffxk7xzmv8xvl"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2 scales]; };
   qualCI = derive2 { name="qualCI"; version="0.1"; sha256="09mzsy5ryyrn1gz9ahrh95cpfk7g09pmjjy0m82fh4xc7j5w6kpf"; depends=[combinat]; };
   qualV = derive2 { name="qualV"; version="0.3-3"; sha256="1yyqk223ydcc0125gsn33a4mcdp8bd76fpn8kj9bfz9g78b8dqmx"; depends=[KernSmooth]; };
   qualityTools = derive2 { name="qualityTools"; version="1.55"; sha256="1c2p78dhwqvzb2k01dvwb41a6hlr2iwpw6fv91036x30rphjzb88"; depends=[MASS Rsolnp]; };
   qualpalr = derive2 { name="qualpalr"; version="0.4.2"; sha256="0lgg8r7w2fwd2nw8x3k876pyc9r3igqri57akc5fwi92gb8grj5b"; depends=[assertthat randtoolbox Rcpp RcppArmadillo RcppParallel]; };
-  qualtRics = derive2 { name="qualtRics"; version="2.2"; sha256="186x27qf5gic2qz9rrg550h6a8gb89hq4qqsjmc2zz73zsga4xsi"; depends=[assertthat httr jsonlite lubridate sjlabelled stringr yaml]; };
-  qualvar = derive2 { name="qualvar"; version="0.1.0"; sha256="07vpq5nyh40y1sq1fsg97z7bbardqakq6bx635v42pv00480h9sh"; depends=[]; };
+  qualtRics = derive2 { name="qualtRics"; version="3.0"; sha256="1cd49jvk04gx278v74yc93f4jni7k30v0anz95mz98x4y3xr45nd"; depends=[assertthat dplyr httr jsonlite readr rlang sjlabelled stringr yaml]; };
+  qualvar = derive2 { name="qualvar"; version="0.2.0"; sha256="1c7b7lcyq2l46sslk185r6xfh5fb35z9qihrhnh294sw1k52bffa"; depends=[]; };
   quantable = derive2 { name="quantable"; version="0.2.2"; sha256="179bqqrga8mpigchfmhf11sc75frhd9nd6yqclz85lnd6gl16yd7"; depends=[caret e1071 gplots Matrix pROC RColorBrewer scales]; };
   quantchem = derive2 { name="quantchem"; version="0.13"; sha256="1ga5xa7lsk04flfp1syjzpnvj3i2ypzh1m49vq1xkdwpm6axdy8n"; depends=[MASS outliers]; };
-  quanteda = derive2 { name="quanteda"; version="0.99.22"; sha256="0dwrhw7j0nc25jidn62ihs01nqg5190msa9qpwvphfbmanfk36n6"; depends=[data_table fastmatch ggplot2 lubridate magrittr Matrix Rcpp RcppArmadillo RcppParallel RSpectra SnowballC spacyr stringi wordcloud XML yaml]; };
+  quanteda = derive2 { name="quanteda"; version="1.0.0"; sha256="099bwlfz3g7nyn59js9bkmvxq7yl13i8p89a54piz4xzqasy7xx3"; depends=[data_table digest extrafont fastmatch ggplot2 ggrepel lubridate magrittr Matrix network Rcpp RcppArmadillo RcppParallel RSpectra sna SnowballC spacyr stopwords stringi wordcloud XML yaml]; };
   quantification = derive2 { name="quantification"; version="0.2.0"; sha256="116cp88q9cmizxc2a8lsysa1vwyp1y86457fx5qkq5dcm4g721g8"; depends=[car]; };
   quantileDA = derive2 { name="quantileDA"; version="1.1"; sha256="0jbklxsy33j7clcw97qq4ijwkrb94v2m11gjcfa38vplfxm9913q"; depends=[]; };
-  quantmod = derive2 { name="quantmod"; version="0.4-11"; sha256="0h4w94xdzfvh0rrgsiqj2q9wa7pw9sspn3dbbwvir94lc6b74dn7"; depends=[curl TTR xts zoo]; };
-  quantoptr = derive2 { name="quantoptr"; version="0.1.2"; sha256="1hvr69ng8z7qhw3w0by95v6sckcismx8d5s69k2949rfg79z3dmh"; depends=[quantreg Rdpack rgenoud stringr]; };
-  quantreg = derive2 { name="quantreg"; version="5.34"; sha256="0bmgfgnmzqwmwwaraliry682yb8kcr396q3rlzrd2qzaa9sgxxh4"; depends=[Matrix MatrixModels SparseM]; };
+  quantmod = derive2 { name="quantmod"; version="0.4-12"; sha256="0y7gh0k1s10vdsfch8777avbhf99mc9crikvx7ahqrw0j631vmhq"; depends=[curl TTR xts zoo]; };
+  quantoptr = derive2 { name="quantoptr"; version="0.1.3"; sha256="0f9vy9yhya4wpya8n345s6n7a5sb29chdkl5fz6dwa31lp1mvvj3"; depends=[quantreg Rdpack rgenoud stringr]; };
+  quantreg = derive2 { name="quantreg"; version="5.35"; sha256="18f3qxv1j1bqmq55hzssz8mnp5ww4flhy80rm2v1rk0mmg9paz7m"; depends=[Matrix MatrixModels SparseM]; };
   quantreg_nonpar = derive2 { name="quantreg.nonpar"; version="1.0"; sha256="1f9120awnkwsgdiqg98lg7xs5l4y80930869x6k9q76595r5m92k"; depends=[fda mnormt quantreg Rearrangement]; };
-  quantregForest = derive2 { name="quantregForest"; version="1.3-6"; sha256="0s24pic04pjd0093w4d3ijjbmhhxbd0m3vl139jwqq4hfslz1hws"; depends=[randomForest RColorBrewer]; };
+  quantregForest = derive2 { name="quantregForest"; version="1.3-7"; sha256="0lk7r02i6zpx9sdl2rp0r7fc3a84s8qhg49nh2x7k3vxwa095pjz"; depends=[randomForest RColorBrewer]; };
   quantregGrowth = derive2 { name="quantregGrowth"; version="0.3-2"; sha256="1ga3qn8g7r465dlxl8wmvz1vlpq5639kmawancsgkm77f316wpzf"; depends=[quantreg]; };
+  quantregRanger = derive2 { name="quantregRanger"; version="1.0"; sha256="1a9q2prr790bpw6s0y5ni5ppd3vqkjr0v4nqp6ywcj5n3sk69pvx"; depends=[ranger Rcpp]; };
   quantspec = derive2 { name="quantspec"; version="1.2-1"; sha256="0kvwifdwy3big0lls5h3wcb48v3jvlfp1l0zjd07jnvj43zj3ysd"; depends=[abind quantreg Rcpp snowfall zoo]; };
   quarrint = derive2 { name="quarrint"; version="1.0.0"; sha256="13fdmmrgn23xd9vpywmcl7pf729gmcxjfl1wxs30axsbp4h1s6rk"; depends=[neuralnet]; };
   questionr = derive2 { name="questionr"; version="0.6.2"; sha256="0mjgwm6xm753r6bjlz79c9vp7xxkb69hiv3mlzrm50slh34x7jhx"; depends=[classInt highr htmltools labelled miniUI rstudioapi shiny]; };
   queuecomputer = derive2 { name="queuecomputer"; version="0.8.2"; sha256="0zpyi4hqhsy2jlbf2ygfl25wh3m166ifp9yw4h4ycd1pga9bj43n"; depends=[dplyr Rcpp RcppArmadillo tidyr]; };
   queueing = derive2 { name="queueing"; version="0.2.11"; sha256="1rgavpivvxwww1qiphbjm25d1avhjcjv31imsrzrkwh1d12b2k7x"; depends=[]; };
   quhomology = derive2 { name="quhomology"; version="1.1.0"; sha256="0acglmjp4x8f81iysxp8x7v5279p8gdidj308b9spn6xbmqgbr8z"; depends=[MASS numbers]; };
-  quickPlot = derive2 { name="quickPlot"; version="0.1.2"; sha256="0wxab03y5dydcrsr0pr7zkfv5aa7yl7v6bin9977iakbnzjqlscd"; depends=[data_table ggplot2 gridBase igraph raster RColorBrewer rgdal sp]; };
+  quickPlot = derive2 { name="quickPlot"; version="0.1.3"; sha256="091d81x5kbjs4hawrdlvkp6ylmcsjg4xqs47hk2nrv5im2nl8i7z"; depends=[data_table ggplot2 gridBase igraph raster RColorBrewer rgdal sp]; };
   quickReg = derive2 { name="quickReg"; version="1.5.0"; sha256="1l1v3k8albxlaz18l2b2x2ryifq4pbdq6n4q7555hnfcik9rqmw5"; depends=[dplyr ggplot2 nortest psych rlang survival]; };
   quickblock = derive2 { name="quickblock"; version="0.1.0"; sha256="15zv7znhq3rl5jkdy0jyxr0h2mkpxir04vvl2hw57c5mn79izcpr"; depends=[distances scclust]; };
   quickmapr = derive2 { name="quickmapr"; version="0.2.0"; sha256="1hxcq4h1rgdmypn3kgmwppzhacyspcj7iv2sy7s2xx5y69x62hf1"; depends=[httr raster rgdal rgeos sp]; };
@@ -9525,26 +9718,26 @@ in with self; {
   quint = derive2 { name="quint"; version="1.2.1"; sha256="1d9dnrjnl9cg2yn5snr6x9qr6lf74639j3ymsxpw0wn5c4fm8z46"; depends=[Formula partykit rpart]; };
   quipu = derive2 { name="quipu"; version="1.9.0"; sha256="1py1qpbwp2smr5di8b3zmzxxhchfmr5qfhqkdiqig28mcnqcmp5n"; depends=[agricolae pixmap shiny stringr xtable]; };
   quokar = derive2 { name="quokar"; version="0.1.0"; sha256="1qnl3x1aa665xpyb3ac07xrnnjdwbmj645p103144k5is5b8likc"; depends=[ald ALDqr bayesQR dplyr ggplot2 GIGrvg gridExtra knitr magrittr MCMCpack purrr quantreg robustbase tidyr]; };
-  quotedargs = derive2 { name="quotedargs"; version="0.1.0"; sha256="1wnzcywrahcf2wwxnwqfxbfmrhzlq2ghfzbhs10gj9nsbbp1l0ch"; depends=[]; };
-  qut = derive2 { name="qut"; version="1.2"; sha256="1w6zsjphzfb1gby21cq20j8cclj15xklwga821sj07x3nchgn421"; depends=[flare glmnet lars Matrix]; };
+  quotedargs = derive2 { name="quotedargs"; version="0.1.1"; sha256="05y3jgix3aix3d4nazd7h9c27mfcl52xl6fdpfpi7zyd4iznpv9g"; depends=[]; };
+  qut = derive2 { name="qut"; version="2.0"; sha256="1r0yg99p88ar1d9qhayzpplssjpsy901b7n6yr7r4n9nldh8p7xz"; depends=[flare glmnet lars Matrix]; };
   qvcalc = derive2 { name="qvcalc"; version="0.9-1"; sha256="1ll71yww8rsbp0qa60w7vdna8yk60cq66cjn5cdk3bkdwyni28yy"; depends=[]; };
   qwraps2 = derive2 { name="qwraps2"; version="0.2.4"; sha256="18ail1y3kpiiwgkf7zn1acfz1ipz7wbk8pcmlganayr8p9yv7sh2"; depends=[dplyr ggplot2 knitr Rcpp tidyr]; };
   r_jive = derive2 { name="r.jive"; version="2.1"; sha256="0l0bhhp6bdc84pzxi7gnsxx3scycw0zahrnc496wx3j43np9hlsg"; depends=[abind gplots SpatioTemporal]; };
   r2d2 = derive2 { name="r2d2"; version="1.0-0"; sha256="1zl0b36kx49ymfks8rm33hh0z460y3cz6189zqaf0kblg3a32nsi"; depends=[KernSmooth MASS sp]; };
   r2dRue = derive2 { name="r2dRue"; version="1.0.4"; sha256="1apdq7zj5fhs349wm9g6y06nn33x24pg3gdp4z1frd18qlacf8z5"; depends=[matrixStats rgdal sp]; };
   r2glmm = derive2 { name="r2glmm"; version="0.1.2"; sha256="0iim92blpa59vgz97c2pi05yhbjjmaffdbkbmk5kplfb2vmazgiy"; depends=[afex data_table dplyr ggplot2 gridExtra lmerTest MASS Matrix mgcv pbkrtest]; };
-  r2lh = derive2 { name="r2lh"; version="0.7"; sha256="1kkyjv9x2klrjnaaw4a16sxdfqmpp9s5mlclzlczlqjypbf2aa6d"; depends=[]; };
   r2stl = derive2 { name="r2stl"; version="1.0.0"; sha256="18lvnxr40cm450s8qh09c3cnkl1hg83jhmv1gzsv6nkjrq4mj5wh"; depends=[]; };
   r4ss = derive2 { name="r4ss"; version="1.24.0"; sha256="1kifzfg2zx6lq2c8qqbhb096z1wgdayhg5qzx5hnkwpn05w5cma3"; depends=[coda corpcor gplots gtools maps pso truncnorm]; };
+  r6extended = derive2 { name="r6extended"; version="0.1.1"; sha256="184c3jh84vihbwg81c2wv3ndaddki8cpas3wgvqk2akyq168rnfc"; depends=[digest hellno magrittr R6]; };
   rARPACK = derive2 { name="rARPACK"; version="0.11-0"; sha256="12h2y46xcfldhjdmm960swgn9b23zvkj5vg2bi42s9qxwgi02d63"; depends=[RSpectra]; };
   rAltmetric = derive2 { name="rAltmetric"; version="0.7.0"; sha256="1vbvjv273vg3pi30vxxa2bivlajfsbqrzflk3payp6ym9myi27mg"; depends=[httr jsonlite rlist]; };
-  rAmCharts = derive2 { name="rAmCharts"; version="2.1.5"; sha256="1lvcws288dxw6j3xjxd3rfr4k1izvnq8ykpmh02v4fqh4hzhqgwn"; depends=[data_table htmltools htmlwidgets knitr pipeR yaml zoo]; };
+  rAmCharts = derive2 { name="rAmCharts"; version="2.1.6"; sha256="00bc05jjyaky71pdic455cs6anqf0gm7563vwwxxzqnrm8lknrag"; depends=[data_table htmltools htmlwidgets knitr pipeR yaml zoo]; };
   rAverage = derive2 { name="rAverage"; version="0.5-8"; sha256="09yap3qv02k5nidi6a4png9xa5yy7cb8hg8s2dq99wnc88s42d26"; depends=[]; };
   rAvis = derive2 { name="rAvis"; version="0.1.4"; sha256="0svplnrn8rrr59v04nr1pz7d5r4dr1kdl0bd3kg8c3azxv47mxbp"; depends=[gdata maptools raster RCurl rgdal scales scrapeR sp stringr XML]; };
   rBayesianOptimization = derive2 { name="rBayesianOptimization"; version="1.1.0"; sha256="194j445nirvvkz880ax0zw2q1mkiy0khdfjl7bwiwj8knhhvkrhw"; depends=[data_table foreach GPfit magrittr]; };
   rBeta2009 = derive2 { name="rBeta2009"; version="1.0"; sha256="0ljzxlndn9ba36lh7s3k4biim2qkh2mw9c0kj22a507qbzw1vgnq"; depends=[]; };
   rCAT = derive2 { name="rCAT"; version="0.1.5"; sha256="03nbhcfgawz0a8h5fr51aqn1n9v7kprwvafxzjb2pb8751rica2d"; depends=[pracma rgdal sp]; };
-  rCBA = derive2 { name="rCBA"; version="0.0.1"; sha256="0mfd4jn5bcn4kqnfmycm5x7kcvll60dp1nma3l1bfj0v2hybxm5d"; depends=[arules rJava]; };
+  rCBA = derive2 { name="rCBA"; version="0.3.0"; sha256="1jsykb747clzd5j78h50gclf7171hk015yssi02lbai79q359r56"; depends=[arules R_utils rJava TunePareto]; };
   rCMA = derive2 { name="rCMA"; version="1.1"; sha256="0dswshg80hbgcib5x9w791sh71q5s4435q8sm9dh170v4ngbax0w"; depends=[]; };
   rCUR = derive2 { name="rCUR"; version="1.3"; sha256="1f38xbc5n91k2y88cg0sv1z2p4g5vl7v2k1024f42f7526g2p2lx"; depends=[lattice MASS Matrix]; };
   rCarto = derive2 { name="rCarto"; version="0.8"; sha256="08813l4xfahjyn0jv48q8f6sy402n78dqsg01192pxl2dfc2i9ry"; depends=[classInt maptools RColorBrewer]; };
@@ -9554,21 +9747,20 @@ in with self; {
   rDNAse = derive2 { name="rDNAse"; version="1.1-1"; sha256="0cl51q61kwvdsm5f49cjjbzggqam1fnr6gp15cmy6m2yahyxg1lk"; depends=[]; };
   rDVR = derive2 { name="rDVR"; version="0.1.1"; sha256="19a4f9k65bd49vkn3sxkjdmcpwyawk7gwmvancvqr745gfgs0wzg"; depends=[RCurl]; };
   rDotNet = derive2 { name="rDotNet"; version="0.9.1"; sha256="18cd5373pdfi1x958llb4cgjqdi1fb7h7m5nkdwcd4xw9hxhinzd"; depends=[Rcpp testthat]; };
-  rEDM = derive2 { name="rEDM"; version="0.6.5"; sha256="19ci7kqqpf2b206kmyaq1rxs8qd39svd2ckdf2gfgm26183zxl0k"; depends=[Rcpp RcppEigen]; };
+  rEDM = derive2 { name="rEDM"; version="0.6.9"; sha256="0825yh82vlkmjkrwbk7xfhdq4c7yq7n4bmmw6x7ywmhbnayqj6b3"; depends=[Rcpp RcppEigen]; };
   rEMM = derive2 { name="rEMM"; version="1.0-11"; sha256="0ynjn10gcmxs8qnh6idb34ppmki91l8sl720x70xkzcqpahy0nic"; depends=[cluster clusterGeneration igraph MASS proxy]; };
-  rENA = derive2 { name="rENA"; version="0.1.0"; sha256="0zipfsalfdp4ldnn8ivgxlfbdg9k3577lplqc42wy9w2bclfrixp"; depends=[data_table data_tree doParallel foreach magrittr plotly R6 Rcpp RcppArmadillo RcppEigen RcppParallel RcppRoll scales]; };
+  rENA = derive2 { name="rENA"; version="0.1.3"; sha256="03sb6fb6d41nf4qd7ifsbr3gqgdk9g5lvjcxvdqhldxrhwn4b1ji"; depends=[data_table data_tree doParallel foreach magrittr plotly R6 Rcpp RcppArmadillo RcppEigen RcppParallel RcppRoll scales]; };
   rFDSN = derive2 { name="rFDSN"; version="0.0.0"; sha256="1ffiqpdzy4ipy2aci22zkih4373ifkjkpvsrza8awhyf9fwqwdsl"; depends=[XML]; };
-  rFSA = derive2 { name="rFSA"; version="0.1.0"; sha256="14drlivamb818dgh808h6j81ww1zlwil42whpclz7ayfddna5rg4"; depends=[]; };
+  rFSA = derive2 { name="rFSA"; version="0.9.1"; sha256="14qpxmzy4vy1fydn8yqh1001mqrgv1i67ai42w61dkk0d4m75z60"; depends=[hashmap tibble]; };
   rFTRLProximal = derive2 { name="rFTRLProximal"; version="1.0.0"; sha256="1458gqy2zbaa62vaimawdr1nk0lsgwz1j4pgw21fkw7bskcszz0f"; depends=[data_table FeatureHashing foreach magrittr Matrix Rcpp RcppArmadillo RcppProgress]; };
   rFerns = derive2 { name="rFerns"; version="2.0.3"; sha256="02lq43mgcz8n21hwb0pjqi0aq5dacnaakpx336q1xzw1kwlvfkhv"; depends=[]; };
-  rForest = derive2 { name="rForest"; version="0.1"; sha256="1y7gqa1333nvllngy821k655glxkb9p6rbnx9cns7dy0qdqjzx50"; depends=[alphashape3d geometry rgl sp]; };
   rGammaGamma = derive2 { name="rGammaGamma"; version="1.0.12"; sha256="1051ah6q11qkxj1my4xybbzc8xcqkxfmps8mv2his5cyfllwidbs"; depends=[gsl]; };
   rGoodData = derive2 { name="rGoodData"; version="0.1.1"; sha256="092sgy6y3dkyr32hrir4jvjwh7n6gfvv9z7i631fipg59255g0zy"; depends=[data_table httr jsonlite]; };
-  rGroovy = derive2 { name="rGroovy"; version="1.0"; sha256="03kyw1hv1xmv580cf47gb3fzvjp27j0a93604h5hap981pzibdpy"; depends=[rJava]; };
+  rGroovy = derive2 { name="rGroovy"; version="1.2"; sha256="0wx17d4c7202dbmgw4nvnvw42fiwlzsl151idrmm4fzfff8y1vdi"; depends=[rJava]; };
   rHealthDataGov = derive2 { name="rHealthDataGov"; version="1.0.1"; sha256="0lkjprss15yl6n9wgh79r4clip3jndly2ab1lv4iijzxnxay099d"; depends=[bit64 httr jsonlite]; };
   rHpcc = derive2 { name="rHpcc"; version="1.0"; sha256="0096z90mmf1j2xpb9034a5ph52m8z6n6xjh3km2vrhw63g3cpwap"; depends=[RCurl XML]; };
   rIsing = derive2 { name="rIsing"; version="0.1.0"; sha256="1208lwfk9j8gghj8xf6i8v6s18h89ydqsd4jq3r88n403yzbzzck"; depends=[data_table Rcpp RcppEigen]; };
-  rJPSGCS = derive2 { name="rJPSGCS"; version="0.2-7"; sha256="1j8lc56q20b0qkl20r8mqa6q822rpfphj00dlmj50rgwk02pfc69"; depends=[chopsticks rJava]; };
+  rJPSGCS = derive2 { name="rJPSGCS"; version="0.2-8"; sha256="0maws52n4lj2byfyv8fj8npk2qyd3dzy83x5h2s1nmgbjm2m36kj"; depends=[chopsticks rJava]; };
   rJava = derive2 { name="rJava"; version="0.9-9"; sha256="0ilibvhxydnh9yhhi9h9isgkq41xvwj43b5m9dhnsm2w5cziaawk"; depends=[]; };
   rJython = derive2 { name="rJython"; version="0.0-4"; sha256="13fpcw37cca738v9idqgi3gv9avfkfwfacxj54p2c4wyg46ghnah"; depends=[rJava rjson]; };
   rKIN = derive2 { name="rKIN"; version="0.1"; sha256="1j6fdi5h869q4d1hq6ha6qyhisa0zk2qmhjrc4ahl9991d680dyn"; depends=[ggplot2 maptools MASS rgeos sp]; };
@@ -9577,23 +9769,23 @@ in with self; {
   rLakeAnalyzer = derive2 { name="rLakeAnalyzer"; version="1.11.0"; sha256="0y6ir41yl8xj19lbwlvzcrfcrdk9cn9i4q4z1pg7mwj4cq6bc6gd"; depends=[plyr]; };
   rLiDAR = derive2 { name="rLiDAR"; version="0.1.1"; sha256="1w0yi4ygw0l9ydbllqjylp30d401bsf7b6fng6qg3pssbi9v3kln"; depends=[bitops deldir geometry plyr raster rgl sp spatstat]; };
   rLindo = derive2 { name="rLindo"; version="8.0.1"; sha256="05qyc4wvpjgw8jxmwn2nwybi695fjn0cdilkprwmjg07c82f0q5n"; depends=[]; };
-  rMR = derive2 { name="rMR"; version="1.0.5"; sha256="18p2z2njb6j8pj7i1mdwl91qynwqmszy8pck02bdynzdag47wl6r"; depends=[biglm]; };
+  rMR = derive2 { name="rMR"; version="1.1.0"; sha256="0da1hclfnnlkp9by6zf2p079643p8nimplr9p3ipbjdy739j344z"; depends=[biglm]; };
   rMouse = derive2 { name="rMouse"; version="0.1"; sha256="0pzxasap5kwxqq36mb4zi139jllsl4vk06dw2pv9xnwdxiszr3gp"; depends=[rJava]; };
   rNMF = derive2 { name="rNMF"; version="0.5.0"; sha256="1nz6h0j5ywdh48m0swmhp34hbkycd7n13rclrxaw85qi9wc42597"; depends=[knitr nnls]; };
-  rNOMADS = derive2 { name="rNOMADS"; version="2.3.8"; sha256="0qgw839ivxaznyjbd1v3w9jfrcx3srs4jp04lq9v82ibvr859a2v"; depends=[fields GEOmap MBA RCurl rvest scrapeR stringr XML xml2]; };
+  rNOMADS = derive2 { name="rNOMADS"; version="2.3.9"; sha256="15l6150vsaa7y2wv896mhdbakxdsg87fx74bbj0rsn0757jss525"; depends=[fields GEOmap MBA RCurl rvest scrapeR stringr XML xml2]; };
   rODE = derive2 { name="rODE"; version="0.99.6"; sha256="0l518ghfw6283kckqcbh45a35vd73njy05v3dwghhhjdj7v3km8b"; depends=[data_table]; };
+  rPackedBar = derive2 { name="rPackedBar"; version="0.1.0"; sha256="12jwkch3264m6ksl8rdjirwdzm1g8b4050mm6rysw9v57k3v57ji"; depends=[data_table plotly scales]; };
   rPowerSampleSize = derive2 { name="rPowerSampleSize"; version="1.0.1"; sha256="0yk61ck2br81cd40yvqxrzi9s680ii26wbl0wjdam04dyf0vh1cv"; depends=[mvtnorm ssanv]; };
   rPraat = derive2 { name="rPraat"; version="1.0.8"; sha256="06f97sa43i0b4x8j48higgx5jyj5q73j6mf2730yfm4db6ahz94m"; depends=[dplyr dygraphs readr stringr]; };
   rPref = derive2 { name="rPref"; version="1.2"; sha256="19b6rycz73rz3nxymb52gfddqsxprkxazwa8pb75vckk13q1cmj0"; depends=[dplyr igraph lazyeval Rcpp RcppParallel]; };
   rPython = derive2 { name="rPython"; version="0.0-6"; sha256="1aw9jn45mw891cskr51yil60i55xv5x6akjvfdsbb9nwgdwwrqdp"; depends=[RJSONIO]; };
   rRAP = derive2 { name="rRAP"; version="1.1"; sha256="1nzvs8bjkbjraa33azxf9mrxsxh87qhh3qlldrcs5y4fq4ancyqb"; depends=[lars lassoshooting MASS]; };
   rSARP = derive2 { name="rSARP"; version="1.0.0"; sha256="0gg6qs7jgn2qvzdwbz0xyfpfzjwa2dwi0j0hal7glc5qlhrrynwl"; depends=[ggplot2 lattice qcc]; };
-  rSCA = derive2 { name="rSCA"; version="2.1"; sha256="1lpix8xsjzyhgksmigvqxpv2bvaka0b1q2kcvdyfrfcw713n19rw"; depends=[]; };
+  rSCA = derive2 { name="rSCA"; version="3.0"; sha256="1ka8p1slqb3a9hfc8z4j7v90k0wn6y35vmwxqaf8jlgwfhhc1v9f"; depends=[]; };
   rSFA = derive2 { name="rSFA"; version="1.04"; sha256="0gd6ji1ynbb04rfv8jfdmp7dqnyz8pxcl5636fypd9a81fggl0gs"; depends=[MASS]; };
-  rSPACE = derive2 { name="rSPACE"; version="1.2.0"; sha256="1nmv8niqc34mipzhny1mlwc9v4kck02ixmm1i25cqdfhsng03dma"; depends=[ggplot2 plyr raster RMark sp tcltk2]; };
-  rSQM = derive2 { name="rSQM"; version="1.2.42"; sha256="0s4ncvrhxnpnxmrilsx6y57s00nc859b9czh08i6na1z31354cpj"; depends=[dplyr EcoHydRology ggplot2 gsubfn mise ncdf4 qmap reshape2 stringr yaml zoo]; };
+  rSQM = derive2 { name="rSQM"; version="1.3.14"; sha256="0m69n2pnfv2085dln6p149a5gw0gif9xk00xmad5s9j68hwjdmym"; depends=[dplyr EcoHydRology ggplot2 gsubfn mise ncdf4 qmap reshape2 stringr yaml zoo]; };
   rSymPy = derive2 { name="rSymPy"; version="0.2-1.1"; sha256="1mrfpyalrq8b6yicy28jsj0xy7hlawa72imsfhabwd3hrx6ld150"; depends=[rJython]; };
-  rTableICC = derive2 { name="rTableICC"; version="1.0.4"; sha256="0if18is64m3ka2dxfbj7vb1lbwwhn2hgfh3kdh7d47nr3z4ak7p0"; depends=[aster partitions]; };
+  rTableICC = derive2 { name="rTableICC"; version="1.0.6"; sha256="1wasfkcnbd2azv2v0n02932zxa86lxrvndny2821lvf7xrc9yy55"; depends=[aster partitions]; };
   rTensor = derive2 { name="rTensor"; version="1.3"; sha256="0ra34sn4g92r6asrn4la2wbsi2y0hnyx163wwi4v0j6f57bslhdw"; depends=[]; };
   rUnemploymentData = derive2 { name="rUnemploymentData"; version="1.1.0"; sha256="0p5hba8iv060szp23s05hvpmwan518ykakm6vqzdcki0inxw0hyv"; depends=[choroplethr rvest stringr]; };
   rWBclimate = derive2 { name="rWBclimate"; version="0.1.3"; sha256="0vs56hx7a85pw4jx8nb8bdlr9dbkl4zdhzhqsm0505xc3qz18vxh"; depends=[ggplot2 httr jsonlite plyr reshape2 rgdal sp]; };
@@ -9610,19 +9802,18 @@ in with self; {
   radiant_design = derive2 { name="radiant.design"; version="0.8.0"; sha256="0n2a0jpjcxxmmr9sbky7v2cnzil3hv6b20yzkyc9lf4a48pqlm4l"; depends=[AlgDesign dplyr mvtnorm polycor r_import radiant_data shiny]; };
   radiant_model = derive2 { name="radiant.model"; version="0.8.0"; sha256="0zlb5ny3s15d1ngdhszkn5wzij4y5fz7c2lwkb9g619pr0ngrwr8"; depends=[car data_tree DiagrammeR dplyr e1071 ggplot2 gridExtra lubridate magrittr NeuralNetTools nnet pryr psych r_import radiant_basics radiant_data rpart sandwich shiny stringr tidyr yaml]; };
   radiant_multivariate = derive2 { name="radiant.multivariate"; version="0.8.0"; sha256="0l3rk5045apjb2jx04jf3mwjixg8cjwrgmz83km9627n93cabs2l"; depends=[car dplyr ggplot2 Gmedian GPArotation gridExtra magrittr MASS pryr psych r_import radiant_data radiant_model scales shiny wordcloud]; };
-  radiomics = derive2 { name="radiomics"; version="0.1.2"; sha256="1l9ribgyk0wgr7cy4fh7qp0hwzxcmkir9r2zwb0ha3rqqggd3xj7"; depends=[Rcpp reshape2 spatstat]; };
   radir = derive2 { name="radir"; version="1.0.2"; sha256="09lcq8ax5x5yk3sqx15rvw3vyi8fyfzgs76kxjhf7hcw4qnib46d"; depends=[hermite]; };
   radmixture = derive2 { name="radmixture"; version="0.0.1"; sha256="0rs60xjd43lg5c9972qhpg6bsqfg2578qvrz7gz3bdip10jb1ryj"; depends=[magrittr MCMCpack plyr quadprog]; };
   rafalib = derive2 { name="rafalib"; version="1.0.0"; sha256="1dmxjl66bfdgrybhwyaa8d4i460liqcdw8b29a6w7shgksh29m0k"; depends=[RColorBrewer]; };
   rags2ridges = derive2 { name="rags2ridges"; version="2.2"; sha256="04f9gvwpgrx54dgbjjixlxa2056aqcz2kryn4jplwf5fc0vj1lyn"; depends=[expm fdrtool ggplot2 graph gRbase Hmisc igraph RBGL Rcpp RcppArmadillo reshape sfsmisc snowfall]; };
   ragt2ridges = derive2 { name="ragt2ridges"; version="0.3.1"; sha256="0zjqrvy1k1lz4caakcj3c6l2j637wp6nxbzfj0gvcn2c4pjcrdyp"; depends=[abind expm fdrtool igraph MASS Matrix mvtnorm rags2ridges Rcpp RcppArmadillo]; };
   ragtop = derive2 { name="ragtop"; version="0.5"; sha256="0h09h9ws9c2d9xc00w4hl000h0kbvq16lz4vgv1w93am8zmsp4wm"; depends=[futile_logger limSolve]; };
-  railtrails = derive2 { name="railtrails"; version="0.0.1"; sha256="1vfpl1cjscgyq1ip6s8f3bsvijnrc8gqzkckb3229d0bya8swc9f"; depends=[tibble]; };
+  railtrails = derive2 { name="railtrails"; version="0.0.3"; sha256="0dbyqviig0sadialqr66x93v3xn8y4qgdb323mji7rasdp5w8ws4"; depends=[tibble]; };
   rainbow = derive2 { name="rainbow"; version="3.4"; sha256="09vxdb4j099grnlx10995b74r3h9g1vs8div3nywgnslaj8x7pay"; depends=[cluster colorspace hdrcde ks MASS pcaPP]; };
   raincpc = derive2 { name="raincpc"; version="0.4"; sha256="0yzpyidvf24frf82pj7rarjh0ncm5dhm0mmpsf2ycqlvp0qld10i"; depends=[SDMTools]; };
   rainfreq = derive2 { name="rainfreq"; version="0.3"; sha256="0985ck2bglg22gfj7m0hc7kpk0apljsbssf1ci99mgk47yi8fk9v"; depends=[RCurl SDMTools]; };
   rakeR = derive2 { name="rakeR"; version="0.2.1"; sha256="0cd89q6k0y9z1qk9k06iw56lhj4c52ckr0g4qv6q95lkyrbi3qg8"; depends=[ipfp wrswoR]; };
-  ramchoice = derive2 { name="ramchoice"; version="0.1"; sha256="1iagimgwjh8ksf6ssjrhnnm0dkn23xqdzzjavzyx5jm4xj1307h1"; depends=[MASS]; };
+  ramchoice = derive2 { name="ramchoice"; version="0.2"; sha256="0br6n6mxcz099rj3dh1sp28wy9g5rqwh0arg0s968pc5h0jfbai5"; depends=[MASS]; };
   ramcmc = derive2 { name="ramcmc"; version="0.1.0"; sha256="0s5jgjqkschr64srblppv9lbvhynlpfiy8cy12fywpmnbv8viazq"; depends=[Rcpp RcppArmadillo]; };
   ramidst = derive2 { name="ramidst"; version="0.1.0"; sha256="1q4lvq2c2vj9xrm2p2w2qjsl4qvwcl6y54y68mmbd6cw7wqpffjj"; depends=[rJava]; };
   ramify = derive2 { name="ramify"; version="0.3.3"; sha256="0cxmkxhshg0vrcxai2gbm4iih04f44liv5nh5jiq85hjz8qbhdi2"; depends=[]; };
@@ -9639,25 +9830,26 @@ in with self; {
   randomForestExplainer = derive2 { name="randomForestExplainer"; version="0.9"; sha256="0gqqm3784krl6xdx7j6xvvyi2rjbyi6c8shm44yvq59is5i7fypc"; depends=[data_table dplyr DT dtplyr GGally ggplot2 ggrepel MASS randomForest reshape2 rmarkdown]; };
   randomForestSRC = derive2 { name="randomForestSRC"; version="2.5.1"; sha256="1p5a5z7ddhnsrln8vpdrwvxbgknwdigczjw8vpxzbkckmf6qfidd"; depends=[]; };
   randomGLM = derive2 { name="randomGLM"; version="1.02-1"; sha256="031338zxy6vqak8ibl2as0l37pa6qndln0g3i9gi4s6cvbdw3xrv"; depends=[doParallel foreach MASS]; };
-  randomLCA = derive2 { name="randomLCA"; version="1.0-13"; sha256="09pnpzf6zgqbjklyc3w1ff0k6vy8gjl42gdd1xb63rv2kqw1yvgk"; depends=[boot fastGHQuad lattice Matrix]; };
+  randomLCA = derive2 { name="randomLCA"; version="1.0-15"; sha256="10rx2ah50dcjxz5y492c59d3pn0dvlgjaxfdf8sknkf6s4pmwkis"; depends=[boot fastGHQuad lattice Matrix]; };
   randomNames = derive2 { name="randomNames"; version="1.0-0.0"; sha256="12q5bs65qivddiaxbsp128j94h2vyrgjvmm80d52r36ffbaigl09"; depends=[data_table]; };
   randomUniformForest = derive2 { name="randomUniformForest"; version="1.1.5"; sha256="1amr3m7h5xcb8gahrr58233chsnx1naf9x5vpjy9p5ivh71xcxf7"; depends=[cluster doParallel foreach ggplot2 gtools iterators MASS pROC Rcpp]; };
-  randomcoloR = derive2 { name="randomcoloR"; version="1.0.0"; sha256="15qgfzwc2cli2gjwzj1pf4h16qciiinihd9ib6ph74jbkpimyh11"; depends=[colorspace stringr V8]; };
+  randomcoloR = derive2 { name="randomcoloR"; version="1.1.0"; sha256="0sirxgrf7xf470d7lls45c698l6c078hqjkjcswmwz6kphykrzhg"; depends=[cluster colorspace Rtsne scales stringr V8]; };
   randomizationInference = derive2 { name="randomizationInference"; version="1.0.3"; sha256="0x36r9bjmpx90fz47cha4hbas4b31mpnbd8ziw2wld4580jkd6mk"; depends=[matrixStats permute]; };
   randomizeBE = derive2 { name="randomizeBE"; version="0.3-3"; sha256="0vdvgk2b1h1lsj0ka01lwldfxanngir91axc8ywa6pg12hrdkkb0"; depends=[]; };
   randomizeR = derive2 { name="randomizeR"; version="1.4"; sha256="0l7gvpm52fwbz79vgy7vn4z2n4gqigimdj6r9drm3lfzbylmx3js"; depends=[ggplot2 plotrix]; };
-  randomizr = derive2 { name="randomizr"; version="0.6.0"; sha256="1hkazj25ipvrdcy9845lgqvnncw3ilrxrhzvh5lm865rk8z0i2cg"; depends=[]; };
+  randomizr = derive2 { name="randomizr"; version="0.8.0"; sha256="0yrjw3q8ivimbir6m3adw22mwq2ka0vpyrsrkvvn05bm5x5mffvs"; depends=[]; };
   randstr = derive2 { name="randstr"; version="0.2.0"; sha256="17593lbk6r089yasafd21i3v90ya9n92rflpzl0qicd2kqqk2gdh"; depends=[random stringi truncnorm]; };
   randtests = derive2 { name="randtests"; version="1.0"; sha256="03z3kxl4x0l91dsv65ld9kgc58z82ld1f4lk18i18dpvwcgkqk82"; depends=[]; };
-  randtoolbox = derive2 { name="randtoolbox"; version="1.17"; sha256="107kckva43xpqncak8ll4h0mjm8lcks4jpf7dffgw5ggcc77ycrb"; depends=[rngWELL]; };
+  randtoolbox = derive2 { name="randtoolbox"; version="1.17.1"; sha256="13akf13qi4yhj9gapym05074b1qzk03vgysy81qsd73pd8r107ls"; depends=[rngWELL]; };
   rangeBuilder = derive2 { name="rangeBuilder"; version="1.4"; sha256="1jjy1d3kljysm3mqgdszdi6incbmg2di63akxswfaiqcp1m68a6y"; depends=[alphahull cleangeo pbapply raster Rcpp rgdal rgeos sp stringi]; };
   rangeMapper = derive2 { name="rangeMapper"; version="0.3-1"; sha256="005r97zwz0czsp543h1g3zrys00s6wdyk0ji9pk7jn625i02cbdk"; depends=[classInt data_table foreach ggplot2 gridExtra lattice magrittr maptools raster RColorBrewer rgdal rgeos RSQLite sp]; };
   rangemodelR = derive2 { name="rangemodelR"; version="1.0.1"; sha256="04zv8a4nhin9masvbw1cmbwdkls4wgq81xfw6kg0wdh1hpqjz1z0"; depends=[]; };
-  ranger = derive2 { name="ranger"; version="0.8.0"; sha256="1fdbm879wx3hlng8s4c4f8f2x5yxz57llakcqnpa0lymybidw3vz"; depends=[Matrix Rcpp RcppEigen]; };
+  ranger = derive2 { name="ranger"; version="0.9.0"; sha256="1pilj5pxl8jl0gsy9vsyqxqdqfcxzvphbgvrlp4hf7r9mrfw9v0p"; depends=[Matrix Rcpp RcppEigen]; };
   rankFD = derive2 { name="rankFD"; version="0.0.1"; sha256="1zb9gxvsmv46mpw5znskhfjxnwkr59hdixcly6i3r78yaqgca0dz"; depends=[coin lattice MASS Matrix]; };
   rankdist = derive2 { name="rankdist"; version="1.1.2"; sha256="1nr9nr5nfziia6jykk598hm5ngkfr6yx5mypq34iyfm24877gd3q"; depends=[hash optimx permute Rcpp]; };
   rankhazard = derive2 { name="rankhazard"; version="1.1.0"; sha256="0kljn9b74alrd22b5pwfnamdbaqi2wa2z6yzpmgpfs3x0hv72fw7"; depends=[survival]; };
   rapiclient = derive2 { name="rapiclient"; version="0.1.2"; sha256="072rlr7z9rj4agkzmy12cz4axh4pajavfd83lpcx2b1lgxpj6ck4"; depends=[httr jsonlite]; };
+  rapidraker = derive2 { name="rapidraker"; version="0.1.0"; sha256="17jzkzm5hvd8vcqql40bwl89sfgz8yicvi0753nzgkmbvanzjhjx"; depends=[openNLPdata rJava slowraker]; };
   rappdirs = derive2 { name="rappdirs"; version="0.3.1"; sha256="0ji6sg3bdn5gazkq14xmmcq7jnbsyxw4lzmmbgv6526j2vn93n1g"; depends=[]; };
   rapport = derive2 { name="rapport"; version="1.0"; sha256="1i1zawar5yxw23km74mrvaxnc9hr06kqjvbm046c09cqi6pw0hjh"; depends=[pander rapportools stringr yaml]; };
   rapportools = derive2 { name="rapportools"; version="1.0"; sha256="1sgv4sc737i12arh5dc3263kjsz3dzg06qihfmrqyax94mv2d01b"; depends=[pander plyr reshape]; };
@@ -9671,16 +9863,17 @@ in with self; {
   rasterImage = derive2 { name="rasterImage"; version="0.3.0"; sha256="0csx7wqwxdsddypd1c9wv74gcyymasn9n6pn05a35j6xhqbk2zp3"; depends=[plotrix]; };
   rasterKernelEstimates = derive2 { name="rasterKernelEstimates"; version="1.0.1"; sha256="1733ic1hxym3gyibk2ysy5zzq7s9rbf6jx63x7irnrcavq151f8s"; depends=[raster]; };
   rasterList = derive2 { name="rasterList"; version="0.5.8"; sha256="0q7apglxzpah04463z07cpkzyd6l6dbbdhm601brzh6yk75z20vh"; depends=[raster]; };
-  rasterVis = derive2 { name="rasterVis"; version="0.41"; sha256="0dsg8ypsxxa7qagy5yjcyqyjqqyy7xgfbmiijr3xbn2n1wp090n9"; depends=[hexbin lattice latticeExtra raster RColorBrewer sp viridisLite zoo]; };
+  rasterVis = derive2 { name="rasterVis"; version="0.43"; sha256="0g6ij4h5di4c0pzv7ghc63jfl3j3rm1g541apbjr6n4k9ci12k4l"; depends=[hexbin lattice latticeExtra raster RColorBrewer sp viridisLite zoo]; };
   ratelimitr = derive2 { name="ratelimitr"; version="0.3.9"; sha256="0w6i9czcbj8ipd9nn4w4h4pqk6xd8anh00cn60hss9hs18fcb21d"; depends=[assertthat]; };
   rateratio_test = derive2 { name="rateratio.test"; version="1.0-2"; sha256="1a2v12z2dr893ha80fhada1820z5ih53w4pnsss9r9xw3hi0m6k5"; depends=[]; };
   raters = derive2 { name="raters"; version="2.0.1"; sha256="16jnx6vv39k4niqkdlj4yhqx8qbrdi99bwzxjahsxr12ab5npbp1"; depends=[]; };
-  ratesci = derive2 { name="ratesci"; version="0.2-0"; sha256="0gviaiia2jih6xx1maf9ajizmgh4vdbca4r17h9m817v3xn21y7b"; depends=[]; };
+  ratesci = derive2 { name="ratesci"; version="0.3-0"; sha256="1mdx47xpgjrjbb3lybajdmxb87dqr6cvv3fsvwfx0n629mjbih4z"; depends=[]; };
   rationalfun = derive2 { name="rationalfun"; version="0.1-0"; sha256="15949vs9pdjz7426zhgqn7y87xzn79ikrpa2vyjnsid1igpyh0mp"; depends=[polynom]; };
-  ratios = derive2 { name="ratios"; version="1.1.0"; sha256="1nss6xfkm5axp8mld1aiqaygrmrwl2jn9k2476la2j3pla047xgm"; depends=[data_table stringr]; };
+  ratios = derive2 { name="ratios"; version="1.2.0"; sha256="16q9v2lhgklvdp3hi9x3afdldznfpwg775p80m2g5074q2dzjpgg"; depends=[data_table stringr]; };
   rattle = derive2 { name="rattle"; version="5.1.0"; sha256="0xxf2wpazsk29y2byyk010n59vmzmhm4phpsqvklmsr1v3m10pvp"; depends=[cairoDevice dplyr ggplot2 magrittr RGtk2 rpart_plot stringi stringr tidyr XML]; };
   rattle_data = derive2 { name="rattle.data"; version="1.0.2"; sha256="0cnmyzvy23jc4vz521c3jg0w4165waycvy5014l5773fy19zq75c"; depends=[]; };
   raw = derive2 { name="raw"; version="0.1.5"; sha256="0w0k35izvsi8vwp38har4ygh1zxnz7hfla8d8fcbvckpfbkwpggp"; depends=[]; };
+  rbacon = derive2 { name="rbacon"; version="2.3.2"; sha256="1bzqrgqw3dbkyz7pl3lk2g83w31i09msqd063b411y9c61cx98ik"; depends=[coda Rcpp]; };
   rbamtools = derive2 { name="rbamtools"; version="2.16.6"; sha256="1sb18qx68fnj1d598lw8fkqnxp3c5s704g6cnhwy299gppj3xg1d"; depends=[refGenome]; };
   rbcb = derive2 { name="rbcb"; version="0.1.2"; sha256="01jbjjnkic8jiy0361b1pnin9d5ssxfnf33k8fc95fw8k02j300k"; depends=[httr jsonlite tibble xml2 xts]; };
   rbefdata = derive2 { name="rbefdata"; version="0.3.5"; sha256="12mcqz0pqgwfw5fmma0gwddj4zk0hpwmrsb74dvzqvgcvpfjnv98"; depends=[RColorBrewer RCurl rjson rtematres wordcloud XML]; };
@@ -9700,7 +9893,7 @@ in with self; {
   rbvs = derive2 { name="rbvs"; version="1.0.2"; sha256="1wzxz2ca8f1phhbqr9p7c8sk09cyrdq5jc45g4ddrqvi2q29k28y"; depends=[]; };
   rcanvec = derive2 { name="rcanvec"; version="0.2.1"; sha256="0gsk2cfiysxjw2lrnpl2l524lvhh9nhnyyh79n8p7vykyqj711yn"; depends=[rgdal sp]; };
   rcarbon = derive2 { name="rcarbon"; version="1.0.0"; sha256="0xgf26m8cw3g4nc4s413xgplxv8a6s2m4m7g3zavsjl3517b86bc"; depends=[doParallel foreach sp]; };
-  rcartocolor = derive2 { name="rcartocolor"; version="0.0.21"; sha256="0a01cxn5vk6a1bqpyhahyf3m7f51p62cm4xgah78km51cywx8d2v"; depends=[ggplot2 scales]; };
+  rcartocolor = derive2 { name="rcartocolor"; version="0.0.22"; sha256="1dh1n01v70sfmymg1w0f272j6nwnrzawqx5x4ljgh46pzqprx56r"; depends=[ggplot2 scales]; };
   rcbalance = derive2 { name="rcbalance"; version="1.8.5"; sha256="15qlk3cqwsvixl17l1fxcajrabmz4y7q5gz0a1pd66f6i1xskcqq"; depends=[MASS plyr]; };
   rcbsubset = derive2 { name="rcbsubset"; version="1.1.3"; sha256="16wd0j0z2ll8hqrk27fss4k9fyjw6xwx30xkrphx9jj2ws08wibl"; depends=[MASS plyr]; };
   rcc = derive2 { name="rcc"; version="1.0.0"; sha256="0a77d54c9qahhsjzpa0436ddsj4j44013r7rbxm0fjz04c0d2921"; depends=[]; };
@@ -9712,16 +9905,16 @@ in with self; {
   rchallenge = derive2 { name="rchallenge"; version="1.3.0"; sha256="1qn2pzch5yk771jsjcsmfsi5vddfb2w50vfqlkmsl6nf5z6sdq9k"; depends=[knitr rmarkdown]; };
   rchess = derive2 { name="rchess"; version="0.1"; sha256="0qnvvvwcl02rmqra9m7qnhy40cbavswbq6i0jm47x6njmr1gpfhy"; depends=[assertthat dplyr ggplot2 htmlwidgets plyr R6 V8]; };
   rcicr = derive2 { name="rcicr"; version="0.3.4.1"; sha256="1sa13sbhx64cf8szr2811iq4a1asb8d3k0igxw6fbssij2lwbxzp"; depends=[aspace dplyr jpeg matlab scales]; };
-  rclimateca = derive2 { name="rclimateca"; version="0.4"; sha256="15jn5dsxznibnxlbz6422vfsb2hc17b90xkifx1imd30h6b8b0gc"; depends=[digest httr lubridate prettymapr reshape2]; };
+  rclimateca = derive2 { name="rclimateca"; version="1.0.0"; sha256="1wydh7k7yyi56l3xdprzx4s7425k68a7f53hx9pvr0xmn501l67z"; depends=[digest dplyr hms httr lubridate magrittr mudata2 prettymapr purrr readr reshape2 rlang stringr tibble tidyr]; };
   rclipboard = derive2 { name="rclipboard"; version="0.1"; sha256="0qphr3qrp0k2gnzk27bgfiq3ff6b8564gmkrjw1kri1p7ilf71wx"; depends=[shiny]; };
   rcmdcheck = derive2 { name="rcmdcheck"; version="1.2.1"; sha256="04gh0drvkikn91i5zmpixhrhyjnsyxwz8k8bx4kgwwrmh1dc7f2s"; depends=[callr clisymbols crayon digest withr]; };
-  rcompanion = derive2 { name="rcompanion"; version="1.11.1"; sha256="0k2xbyfxnh7srkpqk6izp8amv5crrycjwm9w5g13jmy9iyb5x6zc"; depends=[boot BSDA coin DescTools EMT hermite lattice lmtest multcompView nortest ordinal plyr RVAideMemoire WRS2]; };
-  rcongresso = derive2 { name="rcongresso"; version="0.2.1"; sha256="0vk5af679av5702hv6hxlbm10r79jc9y24sx74hf8z5pp2yh2yhw"; depends=[dplyr httr jsonlite magrittr tibble tidyr]; };
+  rcompanion = derive2 { name="rcompanion"; version="1.11.3"; sha256="1wzqqss86z2qggyjwpc41wblw9kkca20mbh6q4dwl4yc7gb4ggaf"; depends=[boot BSDA coin DescTools EMT hermite lattice lmtest multcompView nortest ordinal plyr RVAideMemoire WRS2]; };
+  rcongresso = derive2 { name="rcongresso"; version="0.3.2"; sha256="15b7m1z5lr66kwhl8v8k2car4id9ssd0ypz75z259v8c1w0k7xkl"; depends=[dplyr httr jsonlite magrittr tibble tidyr]; };
   rcoreoa = derive2 { name="rcoreoa"; version="0.1.0"; sha256="13nfziqxxljnczn3idq3zlc9xkklalfnxbakvhs5bw19jmbd11ba"; depends=[crul jsonlite pdftools]; };
   rcorpora = derive2 { name="rcorpora"; version="1.2.0"; sha256="0nxd2arzz2617xxcngvcrrrsky9f1b9zdmpv81zr89y08b3xh9f1"; depends=[jsonlite]; };
   rcqp = derive2 { name="rcqp"; version="0.4"; sha256="1jpzp3cs17bwfabzg7jffa3hni867mjw8yxi0igxicrbz56j33jb"; depends=[plyr]; };
   rcreds = derive2 { name="rcreds"; version="0.6.6"; sha256="1sdrdgn53kgcdnxfjs8jh0h538vb3b9ixz74lbnp54yp09jpqsri"; depends=[collectArgs digest jsonlite magrittr]; };
-  rcrossref = derive2 { name="rcrossref"; version="0.7.0"; sha256="09br2nmb1cz4x57w5vj0ggxyqna5898zxnyrjj4nafkqkwblycl5"; depends=[bibtex crul dplyr jsonlite miniUI plyr R6 shiny stringr xml2]; };
+  rcrossref = derive2 { name="rcrossref"; version="0.8.0"; sha256="01k3jpd6awan8r4kc5wjw0did30i2bafzjr8mwaaqv87gni2yiyf"; depends=[bibtex crul dplyr jsonlite miniUI plyr R6 shiny stringr xml2]; };
   rcrypt = derive2 { name="rcrypt"; version="0.1.1"; sha256="002r5wr0bmqbj014iz8wacj883j6gqcxc786m6p9a7zdrjpx2pqi"; depends=[]; };
   rcss = derive2 { name="rcss"; version="1.2"; sha256="08hiprjcjvc138laqrvlvrmn664b63x829ammzgrwjqcsj4kpmds"; depends=[Rcpp RcppArmadillo rflann]; };
   rcure = derive2 { name="rcure"; version="0.1.0"; sha256="1pcdc168bwn0b90xy8sdwrm2yvhj26xj11wm8z84m48sxy56j4v8"; depends=[arm MASS plyr smcure survival]; };
@@ -9731,6 +9924,7 @@ in with self; {
   rdatamarket = derive2 { name="rdatamarket"; version="0.6.5"; sha256="1y4493cvhcgyg2j5hadx1fzmv2lzwan78jighi2dzyxxzv6pxccn"; depends=[RCurl RJSONIO zoo]; };
   rdataretriever = derive2 { name="rdataretriever"; version="1.0.0"; sha256="1a1dbzs1jravbhidv9wcs52qbd6zf7wf26hixpqjwiq8gsq9l5gh"; depends=[]; };
   rdd = derive2 { name="rdd"; version="0.57"; sha256="1lpkzcjd18x51wzr4d1prdjfsw5978z6zap65psfs02nszy69nqp"; depends=[AER Formula lmtest sandwich]; };
+  rddapp = derive2 { name="rddapp"; version="1.0.0"; sha256="0js2y34k971ydv4nx2g4lr3mnpr3pagdiwqfi9l5431fxxr0pf0n"; depends=[AER Formula lmtest sandwich shiny]; };
   rddensity = derive2 { name="rddensity"; version="0.2.2"; sha256="10530il8fxpgcads6yvj09jwanldlpvjgjqcknl2wly4gmwcwjq9"; depends=[ggplot2 lpdensity]; };
   rddtools = derive2 { name="rddtools"; version="0.4.0"; sha256="1z9sl9fwsq8zs1ygmnjnh3p6h9hjkikbm4z7cdkxw66y0hxgn96s"; depends=[AER Formula ggplot2 KernSmooth lmtest locpol np rdd sandwich]; };
   rdefra = derive2 { name="rdefra"; version="0.3.4"; sha256="05fskap0vvrq08m4gql9gczy04lc3dgxgjcsb57dgp3nng358sf6"; depends=[dplyr httr lubridate rgdal sp tibble xml2]; };
@@ -9740,16 +9934,16 @@ in with self; {
   rdiversity = derive2 { name="rdiversity"; version="1.0"; sha256="0x6s9028v4xcc54yy4977yqw5mrsbqlrm5b9drj05c64mavhm4sq"; depends=[ape ggplot2 ggthemes phangorn phytools plyr reshape2 tibble tidyr]; };
   rdlocrand = derive2 { name="rdlocrand"; version="0.2"; sha256="1jad0b9qqlc88knd92yvjqklilbybp9zpkdq7jx1251m6hivs9sw"; depends=[AER sandwich]; };
   rdnb = derive2 { name="rdnb"; version="0.1-1"; sha256="1mg40jad79mk95ndnljvfvyh9rhbxkw7inpg2vbsixf1ywdljri3"; depends=[brew httr xml2]; };
-  rdomains = derive2 { name="rdomains"; version="0.1.5"; sha256="0xz6vdci2yxmc2850jlgj7c27cndwvk645kwky0whisg6cbv8wdg"; depends=[aws_alexa curl glmnet Matrix RSelenium urltools virustotal XML]; };
+  rdomains = derive2 { name="rdomains"; version="0.1.7"; sha256="1w6jvwzd9lwha4qkf8rhd1g3cpr79fsl4rrmh5chdnbahqg60gh9"; depends=[aws_alexa curl glmnet httr Matrix rlang RSelenium urltools virustotal XML xml2]; };
   rdoxygen = derive2 { name="rdoxygen"; version="1.0.0"; sha256="16907969w66xvy62k45rw10qfv4x8z6jkkc6i97vppkgnlvf4d4b"; depends=[devtools]; };
   rdpla = derive2 { name="rdpla"; version="0.2.0"; sha256="0d32bp68z1agymcmjwnds4fkblhjrcx8i2q6f5b7sl4kdfdbjchf"; depends=[crul data_table hoardr jsonlite tibble]; };
-  rdrobust = derive2 { name="rdrobust"; version="0.98"; sha256="0yyb1mr8hn8ssp8h1ypylyd00mcxkdhxp64kp11hi0j2mzpp5pcy"; depends=[]; };
+  rdrobust = derive2 { name="rdrobust"; version="0.99"; sha256="1c9issw0mssswln2mdirwjlaps4ps8q9z1wr4ailr4c2z9klla9p"; depends=[]; };
   rdrop2 = derive2 { name="rdrop2"; version="0.8.1"; sha256="1f4ysck58dm40k4wn9nfjaxym0mbgfkm146iidfkz7agmd1x0xyl"; depends=[assertive digest dplyr httr jsonlite magrittr purrr]; };
   rdryad = derive2 { name="rdryad"; version="0.3.0"; sha256="18vjq5amaian174ywymsx1px7ckirk36386h66lsq0h87qwnrwj7"; depends=[crul curl oai solrium xml2]; };
   rdwd = derive2 { name="rdwd"; version="0.9.0"; sha256="1zqmfrxjrkp0f8d943wlzvr7g0rrnbp3x9klx3syrbkn7jqxz49i"; depends=[berryFunctions pbapply]; };
   re2r = derive2 { name="re2r"; version="0.2.0"; sha256="0xv355h4bps4a0picxmi6i15niq4knlail80fp9xvszyn72pm8gq"; depends=[htmlwidgets Rcpp RcppParallel stringi]; };
   reGenotyper = derive2 { name="reGenotyper"; version="1.2.0"; sha256="13g4fhj25kdk6wbl1hcabcaxcpv0dj0hj2l502wl1aywk1fvmy8m"; depends=[gplots MatrixEQTL zoo]; };
-  reReg = derive2 { name="reReg"; version="1.0-0"; sha256="0xd78frrzykdrdwj39vv5m11s5v3xg9fym200gz7sffw8vjv3z96"; depends=[aftgee BB MASS SQUAREM survival]; };
+  reReg = derive2 { name="reReg"; version="1.1-1"; sha256="1pjzh9r7488d39a5s0hkymzxh79zc1kp2ag2cp037v3j65mifbin"; depends=[aftgee BB ggplot2 MASS nleqslv plyr SQUAREM survival]; };
   reactR = derive2 { name="reactR"; version="0.1.4"; sha256="12ixd0i9yamvgn5y11vyq627nmr83s3q5xaa9l7sj3mns8x657ap"; depends=[htmltools]; };
   read_dbc = derive2 { name="read.dbc"; version="1.0.5"; sha256="1vrvxkcrk3iw5am9rsadxzf0wsr7z2mdpa5wb0v9jbhda710b4yf"; depends=[foreign]; };
   readBrukerFlexData = derive2 { name="readBrukerFlexData"; version="1.8.5"; sha256="1qmimfxwh6d7s5qrnnk20i2f9l5j1ci3wpfs3qlmggz69jzf589m"; depends=[]; };
@@ -9779,7 +9973,7 @@ in with self; {
   rebus_unicode = derive2 { name="rebus.unicode"; version="0.0-2"; sha256="185313wh4zpp6addfdr78pjhxzazlfwgsddwk02zrzblf4iwzjdm"; depends=[rebus_base]; };
   recexcavAAR = derive2 { name="recexcavAAR"; version="0.3.0"; sha256="0b91jbgqzkgzvk658ckk639yyz1daa0xql3qgl0kzgqg68d53x20"; depends=[kriging Rcpp]; };
   rechonest = derive2 { name="rechonest"; version="1.2"; sha256="0vpff8q5p6in7vjyl62bx3wmksravcg4mpx20qlgy5ia47vyhqp2"; depends=[httr jsonlite RCurl]; };
-  recipes = derive2 { name="recipes"; version="0.1.1"; sha256="0id46c7iaf49miw4kxpidsbg3hdywav43n1lh2zd1vg5946bzg04"; depends=[broom ddalpha dimRed dplyr gower ipred lubridate magrittr Matrix purrr RcppRoll rlang tibble tidyselect timeDate]; };
+  recipes = derive2 { name="recipes"; version="0.1.2"; sha256="1car3a3mqn87pz049cbgkaayz86970mvkapk6al2k7jjw76306l9"; depends=[broom ddalpha dimRed dplyr gower ipred lubridate magrittr Matrix purrr RcppRoll rlang tibble tidyselect timeDate]; };
   recluster = derive2 { name="recluster"; version="2.8"; sha256="05g8k10813zbkgja6gvgscdsjd99q124jx31whncc4awdsgk69s4"; depends=[ape cluster phangorn phytools picante vegan]; };
   recmap = derive2 { name="recmap"; version="0.5.24"; sha256="0ijs331f9x6r2qamx5b47x4wblz2pg7k5b7593hdwhiiwzh5c0ly"; depends=[GA Rcpp sp]; };
   recoder = derive2 { name="recoder"; version="0.1"; sha256="0wh0lqp7hfd4lx2xnmszv1m932ax87k810aqxdb6liwbmvwqnfgd"; depends=[stringr]; };
@@ -9789,10 +9983,11 @@ in with self; {
   recommenderlabJester = derive2 { name="recommenderlabJester"; version="0.1-2"; sha256="0kr9xc2gih2myn1a8h8dxxmdhibv1sjwjsvlrj9d5hvd1mgfhks5"; depends=[recommenderlab]; };
   reconstructr = derive2 { name="reconstructr"; version="2.0.0"; sha256="1pa6b8zns9495f1bdifvx19hsy5808hqbxb2bn1srwnr4s3ma1zi"; depends=[openssl Rcpp]; };
   recosystem = derive2 { name="recosystem"; version="0.4.2"; sha256="1bn6l23gqmfpr6w60ph7zgv53vy3vnq9zdy5x0a8n1yp6b0lw48x"; depends=[Rcpp RcppProgress]; };
-  red = derive2 { name="red"; version="1.3.0"; sha256="183d3r4ifzpyy5iarqrzsspvibfclhlmdp5rca93cj0dxg4hjih6"; depends=[BAT dismo geosphere jsonlite maptools raster rgdal rgeos sp]; };
+  recurse = derive2 { name="recurse"; version="1.1.0"; sha256="1zgzzhbvdzqgmgzj43yvpyc7ahbkn96l5wyr1iqpnn3ha78fy0p3"; depends=[Rcpp]; };
+  red = derive2 { name="red"; version="1.3.1"; sha256="1m8jk3k0g17dlqbws74wi1lsa11v26si2857sxgzv659f46ybmq3"; depends=[BAT dismo geosphere jsonlite maptools raster rgdal rgeos sp]; };
   redR = derive2 { name="redR"; version="1.0.0"; sha256="01safawd9ai34fqxjpc161yzpsk31hfyl8ybcfvdj7a9vdbvcb5i"; depends=[imager]; };
-  reda = derive2 { name="reda"; version="0.3.1"; sha256="0313x4vm0jm0lgzspv0ldsblmjgy13dqbsafpikkh603k5pkq1js"; depends=[ggplot2 splines2]; };
-  redcapAPI = derive2 { name="redcapAPI"; version="1.3"; sha256="08js2lvrdl9ig0pq1wf7cwkmvaah6xs65bgfysdhsyayx0lz5rii"; depends=[chron DBI Hmisc httr stringr]; };
+  reda = derive2 { name="reda"; version="0.4.1"; sha256="0aq6c2h694kdmjis12g4nxq5hdlzsi42nbnpzq7wic305l5r7nxl"; depends=[ggplot2 Rcpp RcppArmadillo splines2]; };
+  redcapAPI = derive2 { name="redcapAPI"; version="2.0"; sha256="1n4kwmd0kgmnx2zcgvrz2dlkxmv6wflyj4pll00qvpb1njgnq1xv"; depends=[checkmate chron DBI httr labelVector lubridate stringr tidyr]; };
   reddPrec = derive2 { name="reddPrec"; version="0.4.0"; sha256="0zmkaiivvjq8mcaz310zgjjc7y0wgsqv29bf8nhli5qawaczvb9a"; depends=[fields snowfall]; };
   redist = derive2 { name="redist"; version="1.3-1"; sha256="0rivfi3jpjvhd36rkhlazx4vr7wsig9lf3im1masjmzd4s00zrd8"; depends=[coda doParallel foreach Rcpp RcppArmadillo sp spdep]; };
   redland = derive2 { name="redland"; version="1.0.17-9"; sha256="01jx6r7zznb6cpi2bx36fpsgig3bkc1nv9afz5s2nfqisxiq48w5"; depends=[roxygen2]; };
@@ -9802,8 +9997,9 @@ in with self; {
   refGenome = derive2 { name="refGenome"; version="1.7.3"; sha256="15p0ra2p1pwhy5ixbhsz1g79c5sc2aap4i4c8kil0m2syg9y45sn"; depends=[DBI doBy RSQLite]; };
   referenceIntervals = derive2 { name="referenceIntervals"; version="1.1.1"; sha256="04199nxh216msaghkp66zsi96h76a7c42ldml0fm66v2vamcslg8"; depends=[boot car extremevalues outliers]; };
   refimpact = derive2 { name="refimpact"; version="1.0.0"; sha256="0qifqhar2pv81npsxl2pj713vgldyap7y79fq20jpk7qigzf9573"; depends=[checkmate curl httr jsonlite tibble xml2]; };
+  refinr = derive2 { name="refinr"; version="0.2.0"; sha256="0dwmqq0wigbzk7vv0ddd066pmwf1sd7rid4nhmsxajv21aghqc3i"; depends=[Rcpp stringdist]; };
   refnr = derive2 { name="refnr"; version="0.1.0"; sha256="1gjjzxpyxm1kf1pqk99bd7f2j85rzmww3r1268bccivf19rs881i"; depends=[]; };
-  refset = derive2 { name="refset"; version="0.1.0"; sha256="0yj87sp6ghxv20hz5knmw3d7way1hsggk759wqxsbfprd38y6khd"; depends=[]; };
+  refset = derive2 { name="refset"; version="0.1.1"; sha256="1xbwvm9066g3f7pd34z5jh04vph4ddy2lkcgmf4kiwa1k5czpwg1"; depends=[]; };
   refund = derive2 { name="refund"; version="0.1-16"; sha256="0npq12bf3qmcbgwdxilwvzvf5x2m3qrxljlsx1sz9xczms2dz7kg"; depends=[boot fda gamm4 ggplot2 grpreg lattice lme4 magic MASS Matrix mgcv nlme pbs RLRsim]; };
   refund_shiny = derive2 { name="refund.shiny"; version="0.3.0"; sha256="0r2xrm4wz35wn9zg4vvw2ysl7zzbz9i080vnbrlp4yrhhlkhpkm1"; depends=[dplyr ggplot2 gridExtra lme4 plotly refund reshape2 shiny tidyr]; };
   refund_wave = derive2 { name="refund.wave"; version="0.1"; sha256="1vnhg7gi5r8scwivqjwhrv72sq8asnm4whx3jk39saphdxpk5hxv"; depends=[glmnet wavethresh]; };
@@ -9813,27 +10009,29 @@ in with self; {
   regexSelect = derive2 { name="regexSelect"; version="1.0.0"; sha256="0xnb9qa8l63ang4r40ky4qhlrs5mbzvmj98dgij26j3mq1ys1pa7"; depends=[shiny shinyjs]; };
   regexr = derive2 { name="regexr"; version="1.1.0"; sha256="1gjv4wl4gjsh5rr0kz057x9j4dhikrm3zzlmxlhd1f9srjdmcdzy"; depends=[]; };
   reghelper = derive2 { name="reghelper"; version="0.3.3"; sha256="0lsdsxi3nawqdzs7k1xma95mmywl86k517cihiv8q2s4maihsja3"; depends=[ggplot2 lme4 nlme]; };
-  registry = derive2 { name="registry"; version="0.3"; sha256="0c7lscfxncwwd8zp46h2xfw9gw14dypqv6m2kx85xjhjh0xw99aq"; depends=[]; };
+  registry = derive2 { name="registry"; version="0.5"; sha256="1yqfl1g6vsl28zn8brzc39659k8lqsmfms7900j7p64ilydyb2sx"; depends=[]; };
   reglogit = derive2 { name="reglogit"; version="1.2-5"; sha256="123l9n3m2v16skhj0rf77swlhy0ii6ridz13pp68hrxb72sr243c"; depends=[boot Matrix mvtnorm]; };
   regnet = derive2 { name="regnet"; version="0.2.0"; sha256="1c7l2wmb5143ly53griy87c40xr8shxfk54kvf36grjxs7grl7pd"; depends=[glmnet Rcpp RcppArmadillo]; };
   regplot = derive2 { name="regplot"; version="0.1"; sha256="1jw93pplg6qdrfv9jhnifkhclxzrhg84zs8gkfl0nb40jxb6pc34"; depends=[beanplot sm survival vioplot]; };
   regpro = derive2 { name="regpro"; version="0.1.1"; sha256="02axbq63hsqwg3q2ixr0lpsdai9q6wj57s5k1343q9m0pw90vr73"; depends=[denpro]; };
   regress = derive2 { name="regress"; version="1.3-15"; sha256="1cgr0r49cmr8nzs2lr2cm8lli1i8azyas0lbnf1681kyab15c0r7"; depends=[]; };
   regsel = derive2 { name="regsel"; version="0.2"; sha256="0wwwpawqsqimaldy0zxnqsy23nwp30ypa5dnrnndwhbs4qz99c9w"; depends=[elasticnet glmnet]; };
-  regsem = derive2 { name="regsem"; version="0.9.2"; sha256="1xbqmsgw98hwwyx4cf9qsjhkwkzhv14fsnwb3jrmqmmcg97w4rwp"; depends=[lavaan Rcpp RcppArmadillo]; };
+  regsem = derive2 { name="regsem"; version="1.0.6"; sha256="1r5arckzx5a307vn8l4z8npzymw8cyzpj40dpnm5pmcc5ihidl4a"; depends=[lavaan Rcpp RcppArmadillo]; };
   regspec = derive2 { name="regspec"; version="2.4"; sha256="18i6k2wqaddrc0dz7v8x3s9205dcfwanqhpnxa9hkpyqzbb17pd3"; depends=[]; };
   regsubseq = derive2 { name="regsubseq"; version="0.12"; sha256="0879r4r8kpr8jd6a3fa9cifm7cv0sqzz8z1alkm1b2fr1625md3g"; depends=[]; };
   regtest = derive2 { name="regtest"; version="0.05"; sha256="1wrrpp2hvkas0yc512gya3pvd0v97pn4v51k5jxkwyd1pp68zd1q"; depends=[]; };
   regtools = derive2 { name="regtools"; version="1.0.1"; sha256="0807r8721qmdl8ahvlzcvqaq2rfvlvhblwbwdpi79fm7dk8vvq1i"; depends=[car dummies FNN mvtnorm]; };
   rehh = derive2 { name="rehh"; version="2.0.2"; sha256="00wxx6w9ahddrg3lz14cqyg3dn0rfcxwy1z8arhdp1pn8d48pahw"; depends=[gplots rehh_data]; };
   rehh_data = derive2 { name="rehh.data"; version="1.0.0"; sha256="1jkvwmnnmfa7iyvrabgcfzw3vfzx0dlgq47s6yf4zayi437v4di0"; depends=[]; };
+  reinforcelearn = derive2 { name="reinforcelearn"; version="0.1.0"; sha256="025v8flr8q2p473kz760vywczhvx8b4lakm6rasr9ijgxpbd2jpn"; depends=[checkmate nnet purrr R6]; };
   reinstallr = derive2 { name="reinstallr"; version="0.1.4"; sha256="1fcmy2cyqy4zwh815j2jbmziaiq6kypwsnj5bx0f10dlq3522m5q"; depends=[]; };
   rel = derive2 { name="rel"; version="1.3.1"; sha256="1a3gffa9jgfm92q0ba9slwdp8r1n5kycywxp0jbjkpvkdpmacnd4"; depends=[]; };
   relMix = derive2 { name="relMix"; version="1.2.3"; sha256="07fcbvhxdfa94ixxvnrkhlm0xxz7wa1lv7xdjp97ajxxp9fy69yl"; depends=[Familias gWidgets paramlink tkrplot]; };
-  relSim = derive2 { name="relSim"; version="0.2-0"; sha256="0cqcp7r263sk874l17wz84mzm4b1dxbfbsk74937rcz1wfc623k5"; depends=[Rcpp]; };
+  relSim = derive2 { name="relSim"; version="0.2-9"; sha256="0qy1fy7xclzaqwhxpclllpypac41s406jc413cgd4jss5c87k4c4"; depends=[multicool Rcpp xtable]; };
   rela = derive2 { name="rela"; version="4.1"; sha256="00ksm7zh1mpd2d5c5d823id3sxj0h3x0ccg6a40fadibvr1ay3ny"; depends=[]; };
   relabeLoadings = derive2 { name="relabeLoadings"; version="1.0"; sha256="16gxdrhkaaa33hypnsacn4vd1g3lbqdl3j8p8va54v777c561g81"; depends=[]; };
   relaimpo = derive2 { name="relaimpo"; version="2.2-2"; sha256="1rxjg2yw2gyshaij98w83cshxwscnq3ql7bg13n7v4nbjsi1l6zh"; depends=[boot corpcor MASS mitools survey]; };
+  relatable = derive2 { name="relatable"; version="1.0.0"; sha256="0147gin6dn76gg7gassar64f0w2gny1sh0k60v7914qhb4sj4s7i"; depends=[compare]; };
   relations = derive2 { name="relations"; version="0.6-7"; sha256="1c16sb4v5n44nichwizilqs491rddn8kpf8qrqw54khj5zzg6w52"; depends=[cluster sets slam]; };
   relax = derive2 { name="relax"; version="1.3.15"; sha256="0cgvxw3pmy9kx8p81bb5n5nnbn6l9hm07k6hdy7p2j2gl15xxnpq"; depends=[]; };
   relaxnet = derive2 { name="relaxnet"; version="0.3-2"; sha256="1l83rk7r4vkcxbfljmibzm8lzpx0vf406hv4h5cy9x0k3rz2bfh0"; depends=[glmnet]; };
@@ -9849,17 +10047,16 @@ in with self; {
   rematch = derive2 { name="rematch"; version="1.0.1"; sha256="0y3mshvpvz9csmq8hk8jbabx4nxlv5sckvfzvm6920ndg34xw2d4"; depends=[]; };
   rematch2 = derive2 { name="rematch2"; version="2.0.1"; sha256="16k0i5p7fa3qfxv59ijyn638wpz8n4jrkrnilqmh5g9l8f8bn4h6"; depends=[tibble]; };
   remindR = derive2 { name="remindR"; version="0.0.1"; sha256="0b27v2qm3z8l9vcng8f0rkphjidxkw5n017ysflx180qjizqq632"; depends=[assertthat]; };
-  remix = derive2 { name="remix"; version="2.1"; sha256="0s1gaf7vj08xd4m7lc9qpwvk0mpamabbxk71970mfazx6hk24dr0"; depends=[ascii Hmisc plyr survival]; };
   remote = derive2 { name="remote"; version="1.2.1"; sha256="1ihzjxbvas7396cwsi9am4pl94naxa9dnhbnh8k0l5p4a50mk33w"; depends=[gridExtra latticeExtra mapdata raster Rcpp scales]; };
-  remoter = derive2 { name="remoter"; version="0.3-2"; sha256="0r7hm5cdbmkfn8lv07mn0lb1qq1g92l0hznjih1ykymjm3h6qyh0"; depends=[assertthat getPass pbdZMQ]; };
-  remotes = derive2 { name="remotes"; version="1.1.0"; sha256="15q2gr4a2gk5zprs9a0bn21fi2ijayk1s5dibrn7zc0g1mwhk2wc"; depends=[]; };
-  rentrez = derive2 { name="rentrez"; version="1.1.0"; sha256="0mlxrbds8bjgi91yxxgsn0dxzjwghnhwjzvvg0z4lpdhrc1nrm4d"; depends=[httr jsonlite XML]; };
+  remoter = derive2 { name="remoter"; version="0.4-0"; sha256="1a7m63l8phv5jnazvdqdrqkaqjwqzaac5y4jm2jn0ypy4n8jvkfl"; depends=[argon2 getPass pbdZMQ png]; };
+  remotes = derive2 { name="remotes"; version="1.1.1"; sha256="07sxlwd09jzlfn7xakw9hwkr9k970lw2mnl0l3rpb5w71968km98"; depends=[]; };
+  rentrez = derive2 { name="rentrez"; version="1.2.0"; sha256="0kqfwz3mx9j9g966nmndlckk30dir1w4kkqblc3qa4f6mzifbrzv"; depends=[httr jsonlite XML]; };
   repeated = derive2 { name="repeated"; version="1.1.0"; sha256="0cdyzhhv89186q5nwablcjbqvm7ncq2w5d09iidbajrac9wd1y60"; depends=[rmutil]; };
   repfdr = derive2 { name="repfdr"; version="1.2.3"; sha256="0jpk44arg1jib0h2w90h851bs5cd1ss32fab9bfvf9iir2jk8985"; depends=[Rcpp]; };
   repijson = derive2 { name="repijson"; version="0.1.0"; sha256="16iypvsmh5r9pk2k6npp17ya5dgkxihsj29pppd3zvdpm3vvd8k1"; depends=[geojsonio ggplot2 jsonlite OutbreakTools plyr sp]; };
   replicatedpp2w = derive2 { name="replicatedpp2w"; version="0.1-2"; sha256="0nskwkqm9z2aphpim6pvykhc3fphlsbap3r49nghkwjpngd0qzj8"; depends=[spatstat spatstat_utils]; };
   replicationInterval = derive2 { name="replicationInterval"; version="2.0.1"; sha256="1jyvyqr8r2fs1cmbz7zjcc8p116bnkslvx27pqi92y5pxgqvsqvr"; depends=[ggplot2 MASS MBESS pbapply]; };
-  replyr = derive2 { name="replyr"; version="0.9.0"; sha256="0f4pf2grbh2rdpxfzxj63jagb1zc049bl8dvhq1hjy4nr12vnphf"; depends=[cdata DBI dbplyr dplyr RSQLite seplyr wrapr]; };
+  replyr = derive2 { name="replyr"; version="0.9.1"; sha256="0vxxmnin8a9mrak33cm01wndbc333dyjh83iyn633yc6ll092klr"; depends=[cdata DBI dbplyr dplyr RSQLite seplyr wrapr]; };
   repmis = derive2 { name="repmis"; version="0.5"; sha256="0z5mjbsl24yjbl0aawr35grcal44rf2xbwv1hy7bdkms94ix79b5"; depends=[data_table digest httr plyr R_cache]; };
   repo = derive2 { name="repo"; version="2.1.2"; sha256="14a7lw1rvn7n7caz3p3y69n9wqw48qsxsjs5kwvpbwsmap7bjj7l"; depends=[digest]; };
   repolr = derive2 { name="repolr"; version="3.4"; sha256="13kmy09c7lk8p1mkdss0krcsfb6d7zcnqpwnl38zkanvh8q3fqhm"; depends=[Matrix Rcpp RcppArmadillo]; };
@@ -9872,9 +10069,9 @@ in with self; {
   repr = derive2 { name="repr"; version="0.12.0"; sha256="1p6a2ryb5iaf4i6nn1iav26bh83wmvncwpk25hyrzd5rxich1bq3"; depends=[]; };
   represent = derive2 { name="represent"; version="1.0"; sha256="0jvb40i6r1bh9ysfqwsj7s1g933d7z5fq9d618yjrqr6hbbqsvac"; depends=[]; };
   represtools = derive2 { name="represtools"; version="0.1.2"; sha256="1zkabch49q23kd1786km5cb9wcaccbxds11v9hwjzsgrs15g5w35"; depends=[whisker]; };
-  reprex = derive2 { name="reprex"; version="0.1.1"; sha256="0jxsnlspy12dnbpkghkmkr6p6783dhvsk3g9mj7gpn5j74qfk6li"; depends=[callr clipr knitr rmarkdown whisker]; };
+  reprex = derive2 { name="reprex"; version="0.1.2"; sha256="105d9vsmqfilgpw8psfb2wyiz1hvcycvh4cqhb3ab37lm3rcavvs"; depends=[callr knitr rmarkdown whisker]; };
   reproducer = derive2 { name="reproducer"; version="0.1.9"; sha256="092gz58sanpawgg0jk1634x9ki0jw460csbb6cywp0ndghswfgwh"; depends=[ggplot2 gridExtra lme4 MASS metafor openxlsx xtable]; };
-  reproducible = derive2 { name="reproducible"; version="0.1.3"; sha256="0a5czpvydy5z98yh6dbhwfya5jix630g0zh3yf1xja069fj6bgav"; depends=[archivist data_table devtools digest fastdigest git2r magrittr raster sp]; };
+  reproducible = derive2 { name="reproducible"; version="0.1.4"; sha256="1z14hpinlykj1y1xf2qhfdabyfvfywrkzbyfjv3vhw8lvvkwajlw"; depends=[archivist crayon data_table devtools digest fastdigest git2r magrittr memoise raster Rcpp RCurl sp versions]; };
   repurrrsive = derive2 { name="repurrrsive"; version="0.1.0"; sha256="1ffldcs30xa4wcd825bgpcmqsndfyxx70dfmbb3c86ic9kq17p01"; depends=[tibble]; };
   reqres = derive2 { name="reqres"; version="0.2.1"; sha256="056cjdx0nmf32vma2jkpbaznbaf76kc4jn0w6nv7blq33qlvx37z"; depends=[assertthat brotli jsonlite R6 stringi urltools webutils xml2]; };
   request = derive2 { name="request"; version="0.1.0"; sha256="1q7zd6q00gdqmgq7s7nq1ixmns8zn2amr5zah9rwnsn8dkllj9yh"; depends=[curl httr jsonlite lazyeval magrittr R6 whisker]; };
@@ -9886,29 +10083,30 @@ in with self; {
   resemble = derive2 { name="resemble"; version="1.2.2"; sha256="189a6b1y720w9ff8cyqazd2d3v1msbfw8zdqr5rmilxvxmnspccs"; depends=[foreach iterators Rcpp RcppArmadillo]; };
   reservoir = derive2 { name="reservoir"; version="1.1.5"; sha256="1qvjq8j2gxp6b8m3k3822f9na8a1kbwzzsmq70m763dcq293rgiz"; depends=[gtools]; };
   reshape = derive2 { name="reshape"; version="0.8.7"; sha256="14ir3w4bb3bsz8jsak27nj7kpn227pdgr9653gjq5wc93rywi9ig"; depends=[plyr]; };
-  reshape2 = derive2 { name="reshape2"; version="1.4.2"; sha256="0swvjmc9f8cvkrsz463cp6snd8bncbv6q8yrfrb4rgkr0dhq6dvd"; depends=[plyr Rcpp stringr]; };
+  reshape2 = derive2 { name="reshape2"; version="1.4.3"; sha256="03ki5ka1dj208fc0dclbm0b4xp9d769pah2j9cs34l776p4r9zwa"; depends=[plyr Rcpp stringr]; };
   reshapeGUI = derive2 { name="reshapeGUI"; version="0.1.0"; sha256="0kb57isws8gw0nlr6v9lg06c8000hqw0fvhfjsjyf8w6zwbbq3zs"; depends=[gWidgets gWidgetsRGtk2 plyr reshape2]; };
-  respirometry = derive2 { name="respirometry"; version="0.5.0"; sha256="0g1azcbp388hp2c0s1qx3l3v8nh88lbslgd6fdi2dn6xfa77sl5i"; depends=[birk lubridate marelac measurements seacarb]; };
+  respirometry = derive2 { name="respirometry"; version="0.6.0"; sha256="0dglmf3m8wpqs3jlza6lj8hamb1j1h8b85a4bfrcwkyap7pggcc5"; depends=[birk lubridate marelac measurements seacarb]; };
   restfulr = derive2 { name="restfulr"; version="0.0.13"; sha256="1dk45mzrr6ka92yjz7hfhkj12kpx1wg4szv1h1mg80mgga4ganbv"; depends=[RCurl rjson S4Vectors XML yaml]; };
   restimizeapi = derive2 { name="restimizeapi"; version="1.0.0"; sha256="1ss6fng5pmqg6cafc256g9ddz8f660c68ysxfan6mn4gdaigz7lb"; depends=[RCurl RJSONIO]; };
   restlos = derive2 { name="restlos"; version="0.2-2"; sha256="083w1ldax8bnf3w4119damma2nz75c3ki187b0275i1mqxqrixp7"; depends=[geometry igraph limSolve rgl som]; };
   restrictedMVN = derive2 { name="restrictedMVN"; version="1.0"; sha256="0qynkg244gzq0yjb0716w7g1sxdq66i11ss8jij86h2mz3ykj137"; depends=[MASS]; };
-  restriktor = derive2 { name="restriktor"; version="0.1-70"; sha256="07j6ypd5jms7kfk0fnlncvwdbmjbfpq3j1fb5j6s2kqn8d21wqy7"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; };
+  restriktor = derive2 { name="restriktor"; version="0.1-80.711"; sha256="10kbfr7gzah119xm4cnx7br9i9fcga38kymjajw7m2571f4jsji9"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; };
   resumer = derive2 { name="resumer"; version="0.0.3"; sha256="0ilya3v75989zqm16x69w4599ax2s5j2n6f16bmhwydrmzxs1g48"; depends=[dplyr rmarkdown useful]; };
   rethinker = derive2 { name="rethinker"; version="1.1.0"; sha256="02zfx08s5xisv1v4y16iqbddi9kb3fcr249b3414fzvs4nm5as94"; depends=[rjson]; };
-  reticulate = derive2 { name="reticulate"; version="1.3.1"; sha256="10ziingkzzhd0775bmwm336khg0grnywj4m1dp34d5ddxja7249f"; depends=[jsonlite Rcpp]; };
+  reticulate = derive2 { name="reticulate"; version="1.5"; sha256="0bbsd87ajw9s37g0m8gpv0rws4jfiic9q31fn5a3lb06r2i4wl53"; depends=[jsonlite Rcpp]; };
   retimes = derive2 { name="retimes"; version="0.1-2"; sha256="019sllyfahlqnqry2gqw4w5cy4cavrqnwpwrbb25cgjpdb19raja"; depends=[]; };
   retistruct = derive2 { name="retistruct"; version="0.5.12"; sha256="11m4i29i3zqh9chyjgdhzqj4yqlslfm8y4q0x14xxc2r9lqbkj9l"; depends=[foreign geometry png R_matlab rgl RImageJROI RTriangle sp ttutils]; };
   reutils = derive2 { name="reutils"; version="0.2.3"; sha256="09dhf4s7wz3anrkzqi16abx64gk8ck2142kfd8pv71mjy3x548l7"; depends=[assertthat jsonlite RCurl tibble XML]; };
   reval = derive2 { name="reval"; version="2.0.0"; sha256="1yxkyc6wdp5h3cp8i42a9cf0b1cwr4nmpd7svlp7bpfxlcnqqa0d"; depends=[doParallel foreach]; };
-  revdbayes = derive2 { name="revdbayes"; version="1.3.1"; sha256="1bd2y3bmd9gd6ih12iy39276pm01d18slhz1k38b8d1nm3bcd2w7"; depends=[bayesplot Rcpp RcppArmadillo rust]; };
+  revdbayes = derive2 { name="revdbayes"; version="1.3.2"; sha256="09xxy3yk2fwd0113dgsz0kd2k1k1ghjv9ay2n03b5cnxqaksa99s"; depends=[bayesplot Rcpp RcppArmadillo rust zoo]; };
   revealedPrefs = derive2 { name="revealedPrefs"; version="0.2"; sha256="1f871y4wkjznzgwxfbnmrfiafq43cyf0i5hjy68ybxc7bbvfryxc"; depends=[Rcpp RcppArmadillo]; };
   revealjs = derive2 { name="revealjs"; version="0.9"; sha256="0h4csxrcl1rzmj3g01nf0mr990zc8swrf4jvmxwqsyzx9v2cqbnc"; depends=[rmarkdown]; };
   revengc = derive2 { name="revengc"; version="1.0.0"; sha256="0ccbw61xqjf9y15ghhzx57q3l48xpw9pq2nb11nrqapp5w3f9vzy"; depends=[stringr]; };
   revgeo = derive2 { name="revgeo"; version="0.15"; sha256="1ns7d1817475lriss6wwgvdm6lj760p40yxqaifla13c2xb73a55"; depends=[RCurl RJSONIO]; };
+  revtools = derive2 { name="revtools"; version="0.2.1"; sha256="0awyyc9f1yvf9yz5slffgm1r2jrnx14ldcqxa32lhj3ig95dm6p9"; depends=[ade4 modeltools plotly shiny shinycssloaders shinydashboard SnowballC stringdist tm topicmodels viridisLite]; };
   reweight = derive2 { name="reweight"; version="1.2.1"; sha256="0fv7q1zb3f4vplg3b5ykb1ydwbzmiajgd1ihrxl732ll8rkkfa4v"; depends=[]; };
   rex = derive2 { name="rex"; version="1.1.2"; sha256="0alsadgjgass3wr8y5d247j12qqzg454sc84vpskclrkmz778g5x"; depends=[lazyeval magrittr]; };
-  rexpokit = derive2 { name="rexpokit"; version="0.26.1"; sha256="12zg56gv9miqlhyi4c61nk2fpgz40xi1kd2wzgs4sjwxn5g8cgvk"; depends=[Rcpp]; };
+  rexpokit = derive2 { name="rexpokit"; version="0.26.2"; sha256="0jydx3rlsbdn74gx2is1x6gsb4b64wqbc5jw2sb4xflvvhxfci67"; depends=[Rcpp]; };
   rfPermute = derive2 { name="rfPermute"; version="2.1.5"; sha256="0c7yi395j640mvnr1qlm9hy1w6vva33fa2lqb3amzkafy4j1cs63"; depends=[abind ggplot2 gridExtra randomForest reshape2 swfscMisc]; };
   rfUtilities = derive2 { name="rfUtilities"; version="2.1-2"; sha256="06vad0m83586dnh7c6qjpi1rsifd67zb2zzdjxcj0bdpvwbaqapd"; depends=[randomForest]; };
   rfigshare = derive2 { name="rfigshare"; version="0.3.7"; sha256="1qgzn0mpjy4czy0pnbi395fxxx84arkg8r7rk8aidmd34584gjiq"; depends=[ggplot2 httpuv httr plyr RJSONIO XML yaml]; };
@@ -9924,29 +10122,31 @@ in with self; {
   rgbif = derive2 { name="rgbif"; version="0.9.9"; sha256="11gji0b1gzh3zpmaff7ly9pvv6jdig5d1277hrss8x4zj7r34iap"; depends=[crul data_table geoaxe ggplot2 jsonlite magrittr oai tibble whisker wicket xml2]; };
   rgcvpack = derive2 { name="rgcvpack"; version="0.1-4"; sha256="1vlvw9slrra18qaizqk2xglzky0i6z3bsan85x908wrg8drss4h5"; depends=[]; };
   rgdal = derive2 { name="rgdal"; version="1.2-16"; sha256="1j83bc16ndk561vgr67z99gba9bhgcchgir8s504avcs9zmfyzq1"; depends=[sp]; };
+  rgdax = derive2 { name="rgdax"; version="0.4.0"; sha256="0f8n016p9y62rpxmqrycmbdb7b3h7vnsyd9qcicqs19yvpm91im2"; depends=[digest httr jsonlite RCurl]; };
   rgen = derive2 { name="rgen"; version="0.0.1"; sha256="0gl82v09q1ha58wd1014s46wzkx1yf348bc7jkl6s4qdc6c4vsb8"; depends=[]; };
   rgenoud = derive2 { name="rgenoud"; version="5.8-1.0"; sha256="12n34r0p00bmflxrmbj927jm0q19j5r9mjplz5mzb1v8praa7v4x"; depends=[]; };
   rgeoapi = derive2 { name="rgeoapi"; version="1.1.0"; sha256="0k8p1l0vrgx0bifbc2i9gxxwih513vbqhjh7fiifyfq3r74i4j7k"; depends=[httr magrittr rjson]; };
   rgeolocate = derive2 { name="rgeolocate"; version="1.0.1"; sha256="1v9kd71wpxna1war0rbp91pc5wdqlganmj2c2fc5m5176dnxd2v3"; depends=[httr Rcpp]; };
-  rgeopat2 = derive2 { name="rgeopat2"; version="0.1.2"; sha256="17rw2m4cs6adjlvrn9l36flncpn8i9j4qgh0cwwyahrrk8qqk4p7"; depends=[readr sf stringr]; };
+  rgeopat2 = derive2 { name="rgeopat2"; version="0.2.0"; sha256="12n5zgx8svcrgsihvhw0drd0l3r48clshs2b36p0md111a2b1gh3"; depends=[readr sf stringr]; };
   rgeos = derive2 { name="rgeos"; version="0.3-26"; sha256="0czlwfqilzh1zj61axisg06d9dksdvvg5hgcs31ydaqkh45llllq"; depends=[sp]; };
   rgexf = derive2 { name="rgexf"; version="0.15.3"; sha256="0iw1vk32ad623aasf6f8hl0qkj59f1dsc2riwqc775zvs5w7k2if"; depends=[igraph Rook XML]; };
   rggobi = derive2 { name="rggobi"; version="2.1.21"; sha256="0zi4rhggngm0y8dsjxqlr2mmfc5wzi7l1qcp5gin4bjlbyf8yb3z"; depends=[RGtk2]; };
   rgho = derive2 { name="rgho"; version="1.0.1"; sha256="0jkfmyn3i50vsqciy96wd2fpik6yfg0sz6rrhwb04jv1dmyz2nfa"; depends=[curl dplyr httr jsonlite lazyeval magrittr memoise readr tibble tidyr]; };
-  rgl = derive2 { name="rgl"; version="0.98.1"; sha256="11k93b3wkfasx63w0niin1ns1kgzrmjm66la7kvp5rljw3cvwjaz"; depends=[htmltools htmlwidgets jsonlite knitr magrittr shiny]; };
-  rglobi = derive2 { name="rglobi"; version="0.2.11"; sha256="0044d5pwjvzjzkia3m1cwkm67376aj8qkpdv51sl0phqcd6d8dv2"; depends=[RCurl rjson]; };
+  rgl = derive2 { name="rgl"; version="0.99.9"; sha256="1rv4gq03mbx62v4kyj83y5kh1f77d68aqwmdb00r8szqlx5w5gdm"; depends=[crosstalk htmltools htmlwidgets jsonlite knitr magrittr shiny]; };
+  rglobi = derive2 { name="rglobi"; version="0.2.12"; sha256="0gfq9nrv381m3lfmfy57ib58y6kv5vicgrypr8jvrghwyfcdqppg"; depends=[RCurl rjson]; };
   rglwidget = derive2 { name="rglwidget"; version="0.2.1"; sha256="0siqxn3gyl98i84p0yha821b4rdrp2i0942mkx819wnf7qwrpqcv"; depends=[rgl]; };
-  rgp = derive2 { name="rgp"; version="0.4-1"; sha256="1p5qa46v0sli7ccyp39iysn04yvq80dy2w1hk4c80pfwrxc6n03g"; depends=[emoa]; };
-  rgpui = derive2 { name="rgpui"; version="0.1-2"; sha256="0sh5wj4f2wj6g3r7xaq95q89n0qjavchi5kfi6sj1j34ykybbs3g"; depends=[emoa rgp shiny]; };
   rgr = derive2 { name="rgr"; version="1.1.14"; sha256="1g5ssxfamghl7d8smlb9zwk31zf5m090y9f88nripad4k9l58fkl"; depends=[fastICA MASS]; };
   rgrass7 = derive2 { name="rgrass7"; version="0.1-10"; sha256="0w5vy8163xlfmdrpyp00x25wwq4jnaspzggpvj160azigndsc1kr"; depends=[sp XML]; };
   rgw = derive2 { name="rgw"; version="0.1.0"; sha256="12f7bsfg24cld9y47jyqxswgc1bk4adbhhdpycapinbcfhyzc91p"; depends=[]; };
-  rhandsontable = derive2 { name="rhandsontable"; version="0.3.4"; sha256="1ng97l2x9hyqv3cckis81p5bxm4wndv6sipyxy26x9pnyw9lq3kp"; depends=[htmlwidgets jsonlite magrittr]; };
+  rhandsontable = derive2 { name="rhandsontable"; version="0.3.6"; sha256="1n631vffbfi8mgbcjgav1209ryj88igb17h73xvjdmglh5f0s6dz"; depends=[htmlwidgets jsonlite magrittr]; };
+  rhmmer = derive2 { name="rhmmer"; version="0.1.0"; sha256="0875b29i8rl9iypxp7vw514avq0ac4abdlfq3861cdd3kgycw8jh"; depends=[dplyr magrittr readr rlang tidyr]; };
   rhnerm = derive2 { name="rhnerm"; version="1.1"; sha256="1fkh2pr4kzvqvagdyjlyab7p591s913104gyq05q170gmvlpmiww"; depends=[]; };
   rhoR = derive2 { name="rhoR"; version="1.1.0.0"; sha256="00djh16s144a9cl2z8zm3za1bsnpzd3i5b9nyqad10xlkgll36li"; depends=[]; };
   rhosp = derive2 { name="rhosp"; version="1.07"; sha256="09wq96micv9wpr3sx8ir7frkanpy3zi3mwn6rbixw2kxvn5wkkfn"; depends=[]; };
   rhub = derive2 { name="rhub"; version="1.0.2"; sha256="18aq28q4vggbp19l9wcw3dylnyv7sd26wg0i5w8jrva5cq1v2n5j"; depends=[assertthat callr clisymbols crayon desc httr jsonlite parsedate prettyunits R6 rappdirs rcmdcheck rematch whoami withr]; };
+  rhymer = derive2 { name="rhymer"; version="1.0.0"; sha256="1k15sd5q6a1ijayl585vc54d1zs4nyrxsfck9bn4nlfdiwc5arwf"; depends=[httr jsonlite]; };
   ri = derive2 { name="ri"; version="0.9"; sha256="00y01n9cx95bjhdpnh7vi0xd5p6al3sxbjszbyxafn7m9mygmnhv"; depends=[]; };
+  ri2 = derive2 { name="ri2"; version="0.1.0"; sha256="02rlczjpfy1q5i7lq4ypindhc65cnryryvbklqjh5dh2xzwjkain"; depends=[estimatr ggplot2 pbapply randomizr]; };
   riceware = derive2 { name="riceware"; version="0.4"; sha256="0pky0bwf10qcdgg9fgysafr35xbmnr9q0jbh56fawj99nbyj3m70"; depends=[random]; };
   rich = derive2 { name="rich"; version="1.0.1"; sha256="0kasr9gb85qhngfayqy3fvrsr0a066krwxsx21nsxcnss0mrqygr"; depends=[boot vegan]; };
   ridge = derive2 { name="ridge"; version="2.2"; sha256="01yldzzlqg0xqha31l3py62lyq7fw5xfsbmz6ifzff24gqsf029x"; depends=[]; };
@@ -9957,13 +10157,14 @@ in with self; {
   rindex = derive2 { name="rindex"; version="0.12"; sha256="1k9zihvrp955c4lh70zjlsssviy2app8w6mv5ln4nawackbz0six"; depends=[regtest]; };
   ring = derive2 { name="ring"; version="1.0.0"; sha256="03sbgxwzms20gp0hkm5s0dihqkx3qf6bw0jrays7jjzrrwzl5657"; depends=[R6]; };
   rintrojs = derive2 { name="rintrojs"; version="0.2.0"; sha256="0qdry88f6ci5g6k0i8mycm9k5ibnmb9zjppjvqqaflw3g3nsnli2"; depends=[jsonlite shiny]; };
-  rio = derive2 { name="rio"; version="0.5.5"; sha256="1wh2lq2zvfhilhy70g9n5lih0yjdgl7vzb7a3bl34vk67w0xzmf3"; depends=[curl data_table foreign haven openxlsx readxl tibble]; };
-  rioja = derive2 { name="rioja"; version="0.9-15"; sha256="1yd0vcis1wsjk2cqkkd07xs0vmkxjw2yz4nnv08gf2cy5hvfsqas"; depends=[mgcv vegan]; };
+  rio = derive2 { name="rio"; version="0.5.9"; sha256="1cb7p0kgas3y84sc1p59zcsp0c4qhg01cs9s7kl927qhral778kd"; depends=[curl data_table foreign haven openxlsx readxl tibble]; };
+  rioja = derive2 { name="rioja"; version="0.9-15.1"; sha256="18fyqcykg12mf4ap0a2la30656xq32immqz11ddmrfrb0vpd2h7h"; depends=[mgcv vegan]; };
   ripa = derive2 { name="ripa"; version="2.0-2"; sha256="0n1gaga0d4bb9qdlm7gksa1nwi4y28kbgwr3icwqgihf1bfb9m81"; depends=[Rcpp]; };
   riskR = derive2 { name="riskR"; version="1.1"; sha256="1qadfyb07idfw0bs006kb3917rzda83di6jmsr22941gv78z1wyv"; depends=[]; };
   riskRegression = derive2 { name="riskRegression"; version="1.4.3"; sha256="1r9habv47wwhnbvcjl6yin4i415ayhisg67rzggv899nqcyqpm80"; depends=[abind cmprsk data_table doParallel foreach ggplot2 lava prodlim Rcpp RcppArmadillo rms survival]; };
   riskSimul = derive2 { name="riskSimul"; version="0.1"; sha256="0s2a1mn6g11m96gqscb916caj2aykcs3rkacpqcdnlyzryk1gsnb"; depends=[Runuran]; };
   risksetROC = derive2 { name="risksetROC"; version="1.0.4"; sha256="1fh0jf8v536qzf1v3awx3f73wykzicli4r54yg1z926ccqb4h80l"; depends=[MASS survival]; };
+  riskyr = derive2 { name="riskyr"; version="0.1.0"; sha256="1s6yrij5d1vhvzc7nnajjnjmxnhrs0r1psppcvwb0qg3ff181y22"; depends=[diagram vcd]; };
   rite = derive2 { name="rite"; version="0.3.4"; sha256="196ashcfj5p52qpnpnrkg7vxq87v7vhf1d7z40mk134gmxk2784j"; depends=[knitr markdown RCurl tcltk2]; };
   ritis = derive2 { name="ritis"; version="0.7.0"; sha256="0f2xhxz8aqq1bhz6pwcdlfpchlvrnpgyh926hzfyg0rhz11k4fmv"; depends=[crul data_table jsonlite solrium tibble]; };
   riv = derive2 { name="riv"; version="2.0-4"; sha256="1c9k62plqgxcgcm2j1s26hqvgww96n6bfjz2yk7m3p2wf8gkkyam"; depends=[MASS quantreg rrcov]; };
@@ -9975,7 +10176,6 @@ in with self; {
   rjade = derive2 { name="rjade"; version="0.1"; sha256="0f1jljj6m1almz0na984n0g314y0rl6a0mx04rbrpipgfgz1h37c"; depends=[V8]; };
   rjags = derive2 { name="rjags"; version="4-6"; sha256="1bc9bzq31liawg3nzwfczf75vgg56fnqjw0997xvlic4ghgbn96g"; depends=[coda]; };
   rje = derive2 { name="rje"; version="1.9"; sha256="1dyd34z6lb0p6zmyax5dpzflgc9a4saka33mvdfcxi5pj0rnygaz"; depends=[]; };
-  rjmcmc = derive2 { name="rjmcmc"; version="0.4.0"; sha256="14zil27bs3a657md1fb57layqg7xw7akip710w3ynlih63nb5pn5"; depends=[coda madness mvtnorm]; };
   rjson = derive2 { name="rjson"; version="0.2.15"; sha256="1vzjyvf57k1fjizlk28rby65y5lsww5qnfvgnhln74qwda7hvl3p"; depends=[]; };
   rjsonapi = derive2 { name="rjsonapi"; version="0.1.0"; sha256="0qshll0y8b6lbfrqmp69w9kc9hgfrz94dk68nddshk9ilg14lx4d"; depends=[crul jsonlite plumber R6]; };
   rjstat = derive2 { name="rjstat"; version="0.3.0"; sha256="0r772p0a0x6g96k6r26vb6vjxa68mzjslwg71r0wysa9kqhvypm4"; depends=[checkmate jsonlite]; };
@@ -9984,13 +10184,14 @@ in with self; {
   rknn = derive2 { name="rknn"; version="1.2-1"; sha256="1x9r01314q0wgqwqzd7d13ycjzb4jzghzd3whgjvm2rsmnabai95"; depends=[gmp]; };
   rkt = derive2 { name="rkt"; version="1.5"; sha256="1rgf7dnk4d1b46rns2mb2s1ilxq7hqrh057vrrl00324r4h8bs1k"; depends=[]; };
   rkvo = derive2 { name="rkvo"; version="0.1"; sha256="0ci8jqf9nc8hb063nckxdnp0nlyr4ghby356lxm00anw44jlmw8v"; depends=[Rcpp]; };
-  rlang = derive2 { name="rlang"; version="0.1.4"; sha256="1x5rwwsx7xrlyspy41yl5nhyvfgzl73195nsdb4rc6z85ab6r6wd"; depends=[]; };
-  rlas = derive2 { name="rlas"; version="1.1.5"; sha256="04s71d724yjwdlh5906l6c4dra3q6pqvvqimlx51jjb75yf761pv"; depends=[data_table Rcpp]; };
+  rlang = derive2 { name="rlang"; version="0.1.6"; sha256="1x62assn8m7cd0q75r809gxsdqmxmd2br1xz53ykzhrfz3j768kp"; depends=[]; };
+  rlas = derive2 { name="rlas"; version="1.1.9"; sha256="1c8sc277jiij1j5sb3wsjdm1pxlp0ia3a39xqzglvmlcnlvcygbq"; depends=[data_table Rcpp]; };
   rld = derive2 { name="rld"; version="1.0"; sha256="1glv4q25z14hcwifwg623h77p4awpsn3nk843pnph4sb3p5qbmn3"; depends=[emdbook MASS survival]; };
   rleafmap = derive2 { name="rleafmap"; version="0.2"; sha256="1i2qczipg7lr6fl35lcl896r54jia7libxx83darrfzc1hd9sdcq"; depends=[knitr raster sp]; };
   rlecuyer = derive2 { name="rlecuyer"; version="0.3-4"; sha256="0d5mcdzn6f5nhwzs165a24z36d0b8gd0cyfyzffvr6p96h8qydy7"; depends=[]; };
   rlist = derive2 { name="rlist"; version="0.4.6.1"; sha256="08awy2p7rykc272wvvya4ddszbr7b7s7qv4wr3hs8ylr4jqlh0dv"; depends=[data_table jsonlite XML yaml]; };
   rlm = derive2 { name="rlm"; version="1.2"; sha256="18y735z05k9pms6iv1739qg3q12w099qhs42icxhqs5gcdhz92fm"; depends=[]; };
+  rlme = derive2 { name="rlme"; version="0.5"; sha256="0p26mw4g12l279lh80vqcjs3pvjr759ap2m622490k1i2ralxzif"; depends=[magic MASS mgcv nlme quantreg Rcpp robustbase stringr]; };
   rlo = derive2 { name="rlo"; version="0.3.2"; sha256="0abq42dhapzmh6hvmildbn8zya29c6p1aqbv8avc03g014dwbrd0"; depends=[PythonInR]; };
   rly = derive2 { name="rly"; version="1.4.2"; sha256="0mppl3y808k9ydn1lwng2bqmdzbbsla2p9p8qk73mp0xyq8iq9sm"; depends=[futile_logger R6]; };
   rma_exact = derive2 { name="rma.exact"; version="0.1.0"; sha256="1igs92la79akyqj84ah23lpcay7i33k7zgzcwm7sii782fhirivx"; depends=[abind metafor]; };
@@ -9999,25 +10200,25 @@ in with self; {
   rmapzen = derive2 { name="rmapzen"; version="0.3.3"; sha256="0rz3wwy8dbb2620gy07aib2aad6ds001vf47bxrj3vzrxp5h448i"; depends=[assertthat digest dplyr geojsonio httr jsonlite maps maptools purrr rgdal sf sp tibble tidyr]; };
   rmarkdown = derive2 { name="rmarkdown"; version="1.8"; sha256="0q1y1qx87xp6vf9h7mfl77rqhmd01xl53l9ap9qj99bfvpabb572"; depends=[base64enc evaluate htmltools jsonlite knitr mime rprojroot stringr yaml]; };
   rmatio = derive2 { name="rmatio"; version="0.12.0"; sha256="1cw7j44rgjgbw2xln7lh29ln53lwfadr8rx0sffkjwc7lbh1r6wa"; depends=[Matrix]; };
-  rmcfs = derive2 { name="rmcfs"; version="1.2.7"; sha256="1ghl013g8vbnsrhn0vwadxvxd2nzab4g341szvzbdj504bxisl92"; depends=[dplyr ggplot2 igraph reshape2 rJava yaml]; };
+  rmcfs = derive2 { name="rmcfs"; version="1.2.9"; sha256="1ar2dsxjf0a6ij91d380arlh9wlywqpfaii80bk6mrq4xg6qy4b0"; depends=[dplyr ggplot2 igraph reshape2 rJava yaml]; };
   rmcorr = derive2 { name="rmcorr"; version="0.2.0"; sha256="0s356ly6d46fv28q176ahz2y0w8igmgcy2li0mi4wkj5gnc0yxx4"; depends=[psych RColorBrewer]; };
   rmdHelpers = derive2 { name="rmdHelpers"; version="1.2"; sha256="1ahzbs8z7wvh1dwbq1kq8wrjrknxi2gck63k70gj0swjvgk0ih5r"; depends=[dplyr knitr]; };
   rmda = derive2 { name="rmda"; version="1.4"; sha256="0agh4mrs8mjjb7hc41r59mbnq0h873fmykljla1cbf4ikhxwjihf"; depends=[caret MASS pander reshape]; };
   rmdformats = derive2 { name="rmdformats"; version="0.3.3"; sha256="06nyrdhy26mvgfb1bnlbd8hslybpc01a30a40wwlc3ay7yp0nzrj"; depends=[bookdown htmltools knitr questionr rmarkdown]; };
-  rmdshower = derive2 { name="rmdshower"; version="2.0.0"; sha256="0prxq0zakcm5lh1ki15d1d267yxr43295zcxigpy011lawccaglm"; depends=[rmarkdown]; };
+  rmdshower = derive2 { name="rmdshower"; version="2.1.1"; sha256="1sjpi5ils31adii51gaa8ly7x93l9ganp6in8rsln6si4jc2ppg9"; depends=[rmarkdown]; };
   rmeta = derive2 { name="rmeta"; version="2.16"; sha256="1s3n185kk0ddv8v6c7mbc7cpj6yg532r7is6pjf9vda7317rxywy"; depends=[]; };
-  rmetasim = derive2 { name="rmetasim"; version="3.1.5"; sha256="1p1wh4wab1pm9dn5nidnj2294svvdg6w4yiwsjm1bqgi2zpcdjln"; depends=[ade4 adegenet gtools pegas]; };
+  rmetasim = derive2 { name="rmetasim"; version="3.1.7"; sha256="0sz4mdprdi6sgkfwfdvh2hr9nxiwq17sw0vggq3cvs7lzb0i6m9r"; depends=[ade4 adegenet gtools pegas]; };
   rmgarch = derive2 { name="rmgarch"; version="1.3-0"; sha256="0brqjhplvzl0bgsi6x057rb2cg5x372i746dhddr013p1mx0rlcx"; depends=[Bessel ff MASS Matrix pcaPP Rcpp RcppArmadillo Rsolnp rugarch shape spd xts zoo]; };
   rminer = derive2 { name="rminer"; version="1.4.2"; sha256="1hjgcawjrwsf0nv2hlznr1cvpm445yyxc6cq28k2yzyivk74si34"; depends=[adabag Cubist e1071 glmnet kernlab kknn lattice MASS mda nnet party plotrix pls randomForest rpart xgboost]; };
   rmngb = derive2 { name="rmngb"; version="0.6-1"; sha256="1wyq8jvzqpy1s6w0j77ngh5x2q7mpj0ib01m8mla20w6yr6xbqjk"; depends=[Hmisc]; };
-  rmonad = derive2 { name="rmonad"; version="0.3.0"; sha256="1jbwy8qwj5cqqzgkd5sxan2npa739bdx478gy7n9mcpzmldlkg2i"; depends=[DiagrammeR magrittr pryr R6]; };
+  rmonad = derive2 { name="rmonad"; version="0.4.0"; sha256="060hw8ijwnmizzma3q4jy5knif2djzc4x4aahbrv2kaqz157mva2"; depends=[glue igraph magrittr pryr uuid]; };
   rmp = derive2 { name="rmp"; version="2.0"; sha256="1cs5ylh5z9mfj3r0yvxxd38ksna2dxk9nnfgqkry1kxibnd1b4ff"; depends=[]; };
-  rmpw = derive2 { name="rmpw"; version="0.0.1"; sha256="0h5h77hh6v6nfhivmrs5dyks9krwqyh32kmp0mlwialrpshs0hp3"; depends=[]; };
-  rms = derive2 { name="rms"; version="5.1-1"; sha256="1qxzs640yq61629d0fb9ydbx222fbd7q922jrw5v8d64yn6r92f4"; depends=[ggplot2 Hmisc htmlTable htmltools lattice multcomp nlme polspline quantreg rpart SparseM survival]; };
+  rmpw = derive2 { name="rmpw"; version="0.0.3"; sha256="1iidiq0pz88wgh155hfy8mw0cwwwcl77zshcjrbw11zpx6p8qy94"; depends=[gtools MASS]; };
+  rms = derive2 { name="rms"; version="5.1-2"; sha256="01wjxlqfz6l1bdsvxqq0lsbps0k86hx3ayb6fl2n2hxccvsfxkzi"; depends=[ggplot2 Hmisc htmlTable htmltools lattice multcomp nlme polspline quantreg rpart SparseM survival]; };
   rms_gof = derive2 { name="rms.gof"; version="1.0"; sha256="1n0h3nrp11f2x70mfjxpk2f3g4vwjaf4476pjjwy49smxxlxwz82"; depends=[]; };
   rmsfact = derive2 { name="rmsfact"; version="0.0.3"; sha256="05s23rfs9prr2ia3h4h9y614xhv91lbgppgf3mrrssxkwz220kd5"; depends=[]; };
   rmsfuns = derive2 { name="rmsfuns"; version="0.0.0.2"; sha256="0by2d6l25lf5vidxbkcxghpxycffyldzzbxcw6h4rm86zmkkv1m0"; depends=[magrittr purrr readr tidyverse xts zoo]; };
-  rmumps = derive2 { name="rmumps"; version="5.1.1-3"; sha256="1bkz6kdyjrz88f0awp9zx0kv3jx2fqpnf8ip2vhrpwcgrbv6d0d8"; depends=[Rcpp]; };
+  rmumps = derive2 { name="rmumps"; version="5.1.2-4"; sha256="1qdpvyxwb18dapa8xqj8kjjmrnrqixkn29qn6q4cnwdwi1zcbdx6"; depends=[Rcpp]; };
   rmutil = derive2 { name="rmutil"; version="1.1.0"; sha256="0f30afqbzrsgbnfpniwhbw4b8hlzc5zyaixvn9giggzwczfnf29k"; depends=[]; };
   rnaseqWrapper = derive2 { name="rnaseqWrapper"; version="1.0-1"; sha256="1fa3hmwrpccf09dlpginl31lcxpj5ypxspa0mlraynlfl5jrivch"; depends=[ecodist gplots gtools]; };
   rnaturalearth = derive2 { name="rnaturalearth"; version="0.1.0"; sha256="193b31a7n9jhc607mhwxbpx5gr0fpj3qasm9dbi6kcc7vac3ilgm"; depends=[sf sp]; };
@@ -10040,12 +10241,13 @@ in with self; {
   robeth = derive2 { name="robeth"; version="2.7"; sha256="03pnwd3xjb9yv8jfav0s4l9k5pgpampp15ak7z0yvkjs20rvfq3d"; depends=[]; };
   robets = derive2 { name="robets"; version="1.3"; sha256="123f08h763ifd2ydh1hp3jp6gqnc12cia9ndlp8jxkck8l3pnwkh"; depends=[forecast Rcpp]; };
   robfilter = derive2 { name="robfilter"; version="4.1"; sha256="161rsqyy2gq1n6ysz0l4d4gqvxhs72hznc2d5hljxdaz3sbdzzig"; depends=[lattice MASS robustbase]; };
+  robis = derive2 { name="robis"; version="1.0.0"; sha256="02spxy33vh675dvhx2v6f06hxzcwfrsmkzb6yk5h30xp21blqv4g"; depends=[dplyr httr jsonlite leaflet]; };
   robmed = derive2 { name="robmed"; version="0.1.1"; sha256="1716vzci0lmim4n28bc2pjky1shjxqrclgllj3hc4dzf8j22dxbz"; depends=[boot ggplot2]; };
-  robotstxt = derive2 { name="robotstxt"; version="0.5.2"; sha256="1bgc6avwzfssmshkmg2vxsyhj4sq9hmyxwfyv5yfy883h2an4x2q"; depends=[future httr magrittr spiderbar stringr]; };
+  robotstxt = derive2 { name="robotstxt"; version="0.6.0"; sha256="1xia7xivqnqj0xis6i4qzm3v414ga1m7lmv1piz1b431faq9s1ai"; depends=[future httr magrittr spiderbar stringr]; };
   robreg3S = derive2 { name="robreg3S"; version="0.3"; sha256="0rv8qh98wws1f40d1kmysyy9qin0ngsvwq63cnxbwi290wsnrvls"; depends=[GSE MASS robustbase]; };
   robumeta = derive2 { name="robumeta"; version="2.0"; sha256="1ynlfxlzh442jd1cf02j0f948m16d536a30gb4bf7208baqri1vg"; depends=[]; };
   robust = derive2 { name="robust"; version="0.4-18"; sha256="1b7qh1aff500nd6dh4y2ipmjgdiq8991shflb63pc39vpc0ny6g4"; depends=[fit_models lattice MASS robustbase rrcov]; };
-  robustBLME = derive2 { name="robustBLME"; version="0.1.2"; sha256="02wlycmq86sl4r9880z2845rmkn6ayq9l7y7a5whzhb0s3r2dpji"; depends=[doParallel foreach iterators lme4 mvtnorm numDeriv Rcpp RcppArmadillo]; };
+  robustBLME = derive2 { name="robustBLME"; version="0.1.3"; sha256="18wx116l1riy4wn4083kxl637mkyyi9wbwnmvhkgqw3vb36s4vxd"; depends=[doParallel foreach iterators lme4 mvtnorm numDeriv Rcpp RcppArmadillo]; };
   robustDA = derive2 { name="robustDA"; version="1.1"; sha256="1yys6adkyms5r4sw887y78gnh97qqr7sbi5lxv5l9bnc4ggcfiz6"; depends=[MASS mclust Rsolnp]; };
   robustETM = derive2 { name="robustETM"; version="1.0"; sha256="1dlj79v08bls500lb81rya6vwx58h97rpq1sy9zwd3mfl9b6awp9"; depends=[]; };
   robustHD = derive2 { name="robustHD"; version="0.5.1"; sha256="14v6l0appy206zx1jcv7m14r2z9g12dpkm6zxzv756rca2yj8fp5"; depends=[ggplot2 MASS perry Rcpp RcppArmadillo robustbase]; };
@@ -10056,7 +10258,7 @@ in with self; {
   robustgam = derive2 { name="robustgam"; version="0.1.7"; sha256="0s1z7jylj757g91najbyi1aiqnssd207jfm9yhias746540qp3kw"; depends=[mgcv Rcpp RcppArmadillo robustbase]; };
   robustlmm = derive2 { name="robustlmm"; version="2.1-4"; sha256="0qli04ylw25vc35k1maaddkn7rh8y5p7ggla1qvi8b1sglg43xhh"; depends=[ggplot2 lattice lme4 Matrix nlme Rcpp RcppEigen robustbase xtable]; };
   robustloggamma = derive2 { name="robustloggamma"; version="1.0-2"; sha256="1cifyasrik010zs8jsz0kzzmwm3qmc0y7h2dahg2ibpwxfcqfcpq"; depends=[numDeriv RobustAFT robustbase survival]; };
-  robustrank = derive2 { name="robustrank"; version="2016.11-9"; sha256="11x9smfkbq4f0p2n3gxhwzs2xsd019pilxrds601yshz754ccj98"; depends=[]; };
+  robustrank = derive2 { name="robustrank"; version="2017.12-2"; sha256="0lcjn77lsdfbcby89hfcz2h049v2fndw7rankdcdgnl6lw2bdpvr"; depends=[kyotil]; };
   robustrao = derive2 { name="robustrao"; version="1.0-3"; sha256="0gcxxizsg380blrv55vl9f3az8gnr274c6idi0pimhh5c26h7ma6"; depends=[doParallel foreach gmp igraph iterpc quadprog]; };
   robustreg = derive2 { name="robustreg"; version="0.1-10"; sha256="1zwfgmla6wna48vq5hbz7c7fvmb29y949790w2j6x8pkjzr781sz"; depends=[Matrix Rcpp RcppArmadillo]; };
   robustsae = derive2 { name="robustsae"; version="0.1.0"; sha256="0fi1fpqnfj6vkmidlr90kqbn1bxxxqb5qpqqrz9rrimlsvrc4ddl"; depends=[coda lattice MCMCpack mvtnorm pscl]; };
@@ -10079,14 +10281,15 @@ in with self; {
   rootWishart = derive2 { name="rootWishart"; version="0.4.0"; sha256="028k1h6vibbcnmh35kg0z388c991k8v78ac0fbrv1k2ajqrrl4lg"; depends=[BH Rcpp RcppEigen]; };
   roots = derive2 { name="roots"; version="1.0"; sha256="1ssmmmrg18xmqxs6f7dqv07357iwcvk21j1gxsl8s9njbj2plxai"; depends=[animation igraph rARPACK]; };
   rope = derive2 { name="rope"; version="1.0"; sha256="06qp6h8cjnz0yacm4r39k99hrw74iyq16h5mqfcki7sf3zqbfm7r"; depends=[]; };
-  ropenaq = derive2 { name="ropenaq"; version="0.2.4"; sha256="08kwk6zacmmi9vq0fwq1jvb2d5k4gh041brhrqzwkyhj4i1crlp2"; depends=[crul dplyr jsonlite lazyeval lubridate tidyr]; };
+  ropenaq = derive2 { name="ropenaq"; version="0.2.5"; sha256="0rvp41c4px773w29m9483rbkv3y365n8n6gf969mzbdpvx90pyql"; depends=[crul dplyr jsonlite lazyeval lubridate tidyr]; };
   ropensecretsapi = derive2 { name="ropensecretsapi"; version="1.0.1"; sha256="0d4yl0h4am3blskdnzk119hk374c3vx0cg99r20w07yh8jfafrw7"; depends=[RCurl RJSONIO]; };
   ropercenter = derive2 { name="ropercenter"; version="0.1.0"; sha256="0rp2dwdkl3qlwm8di0q184ppr77zs6i7njyr305pnxmbad119w9d"; depends=[dplyr foreign haven httr rvest stringr xml2]; };
-  rorcid = derive2 { name="rorcid"; version="0.3.0"; sha256="1c4di3cgx9b86v5fnsahf7gd1shb6klrg4mfyhf4irndn7b1r562"; depends=[httr jsonlite tibble]; };
+  rorcid = derive2 { name="rorcid"; version="0.4.0"; sha256="1diz14b5jzs9i4khyykq58cbgz87qraivv9lhq5nrrrfi2gryl9r"; depends=[crul data_table fauxpas httr jsonlite tibble xml2]; };
   rorutadis = derive2 { name="rorutadis"; version="0.4.2"; sha256="13a7xj4qw1nd8xgrqhrki3php960lgy9gy38sg4kpvs4j2rwijzc"; depends=[ggplot2 gridExtra hitandrun Rglpk]; };
-  rosetteApi = derive2 { name="rosetteApi"; version="1.8.0"; sha256="0d5pxffax9g3i61rl3nbbn55ig2xypbbqjqv1v40iwnn9c83mksi"; depends=[httr jsonlite]; };
+  rosetteApi = derive2 { name="rosetteApi"; version="1.9.0"; sha256="0pnrfc0dcbh5r3qwfwyb0q063bzwpw4ga60965y5qyxz64cyx74r"; depends=[httr jsonlite]; };
   rosm = derive2 { name="rosm"; version="0.2.2"; sha256="0carzc8rn8997vdqgcf7a6lcpmw7dldhnh6n0rjyb09and8yca7r"; depends=[abind curl jpeg plyr png prettymapr rgdal rjson sp]; };
   rospca = derive2 { name="rospca"; version="1.0.3"; sha256="0nnqwvjsavxp7ci8xpvkri8ff9xwlcdvx33k32vf1sywr86mr1xs"; depends=[elasticnet mrfDepth mvtnorm pcaPP pracma robustbase rrcov rrcovHD]; };
+  rosqp = derive2 { name="rosqp"; version="0.1.0"; sha256="0975g7p75bq238g7lr200svsqm9i11z7l331r0igm5ycahljrlsm"; depends=[Matrix R6 Rcpp]; };
   rotationForest = derive2 { name="rotationForest"; version="0.1.3"; sha256="1z2wk3mcs5hrahsxralidbc0dd8gxdbwjpr2f71g4g3isfx1ic8d"; depends=[rpart]; };
   rotations = derive2 { name="rotations"; version="1.5"; sha256="1zksh6hyxdkm0lvvrld6dgkmhszn6wsjrjzr2xbn3af3gsvsydaa"; depends=[ggplot2 Rcpp RcppArmadillo rgl sphereplot]; };
   rotl = derive2 { name="rotl"; version="3.0.3"; sha256="0pfpgynvdi011m6j6gs98irldpjrdc8rgza36ndk60q2w5z436h4"; depends=[ape assertthat httr jsonlite rentrez rncl]; };
@@ -10096,7 +10299,7 @@ in with self; {
   roxygen2 = derive2 { name="roxygen2"; version="6.0.1"; sha256="0xpzziminf225kjwhyl51kgkzhplyzhk5farhf5s822krl2xqbfj"; depends=[brew commonmark desc digest R6 Rcpp stringi stringr xml2]; };
   royston = derive2 { name="royston"; version="1.2"; sha256="1rywc89qzx0hldbq10201bjdhz60pq2gmgd9b9j52mza3w4canjz"; depends=[moments nortest]; };
   rpanel = derive2 { name="rpanel"; version="1.1-3"; sha256="1wm0dcbyvxz4ily8skz2yda44n74x2nmc4pg11ja0yvk038gjfns"; depends=[]; };
-  rpart = derive2 { name="rpart"; version="4.1-11"; sha256="165djqj7lk81jr7z5fwccq3h7ayys26hx1kj9hndvg2rkyaq1arq"; depends=[]; };
+  rpart = derive2 { name="rpart"; version="4.1-12"; sha256="177p03w4m0qshb3sqkdyixim3f44g2an31v3vlbjmpzjvd5ff6yq"; depends=[]; };
   rpart_plot = derive2 { name="rpart.plot"; version="2.1.2"; sha256="1hn8s0fawwsr6j4m7wf38q7a608bjf9v1w706p49a08189baqdxz"; depends=[rpart]; };
   rpart_utils = derive2 { name="rpart.utils"; version="0.5"; sha256="00ahvmly6cdf7qhhcic0dbjlljqq8kbhx15rc7vrkd3hzd55c0im"; depends=[rpart]; };
   rpartScore = derive2 { name="rpartScore"; version="1.0-1"; sha256="15zamlzbf6avir8zfw88531zg5c0a6sc5r9v5cy9h08ypf34xf4y"; depends=[rpart]; };
@@ -10104,84 +10307,85 @@ in with self; {
   rpatrec = derive2 { name="rpatrec"; version="1.0.1"; sha256="0zj461frf6n5s97zq7r52q0blsn2xq2759impgz6v4pr87gmq0si"; depends=[np]; };
   rpca = derive2 { name="rpca"; version="0.2.3"; sha256="135q3g8jmn9rwamrc9ss45cnbfyw8kxcbrf0kinw8asz70fihj9z"; depends=[]; };
   rpcdsearch = derive2 { name="rpcdsearch"; version="1.0"; sha256="17g3x15qgv2hamlj451sb88i83n8svw5vnmjpijp5cnn5d1jx0d6"; depends=[assertthat combinat dplyr stringr xlsx]; };
-  rpdo = derive2 { name="rpdo"; version="0.2.2"; sha256="1yzvi4givrwpbs56p2vf0gciaigq50qq0r0n5lyaqk73azzhnhxc"; depends=[curl datacheckr dplyr lubridate magrittr readr stringr tidyr]; };
-  rpf = derive2 { name="rpf"; version="0.55"; sha256="1l451qvbfhl6lxm9cd997vxy8lcv7r936vzagf3lablnra5spwcb"; depends=[mvtnorm RcppEigen]; };
+  rpdo = derive2 { name="rpdo"; version="0.2.3"; sha256="150kd9pvfr7msrh55vsqcj8lv994izlvhxf4g5n1qbzdcaqsdjzp"; depends=[checkr]; };
+  rpf = derive2 { name="rpf"; version="0.56"; sha256="089n2mmczvvwga8ak3l0p326qsp83d0cz03lc6fhx6a9w5vhl67i"; depends=[mvtnorm RcppEigen]; };
   rpg = derive2 { name="rpg"; version="1.6"; sha256="1vn5cswrkmw98z1dr0f0yjkz3n8kwvjb4zknqg81fzqsagfc89yx"; depends=[getPass RApiSerialize Rcpp uuid]; };
   rpgm = derive2 { name="rpgm"; version="1.1.1"; sha256="07zynn6rzpi651i3nyfgyv4wbxkmxhr1cjhmqn7i0zcb11yv20dc"; depends=[]; };
-  rphast = derive2 { name="rphast"; version="1.6.5"; sha256="1jff94hx7skvd6icbrcyabsvz80sgqqv28vz91mcz5jh6v6afhl3"; depends=[]; };
+  rphast = derive2 { name="rphast"; version="1.6.9"; sha256="111m824z7z0lqdj4kk4cp1yfjhx7d5d9463k892dyvgjvkagvi9g"; depends=[]; };
   rpicosat = derive2 { name="rpicosat"; version="1.0.1"; sha256="1zj2d6jairmvya91vhv9kpkf34zmzl9vlha5yvfjj0j0apmqc0li"; depends=[]; };
   rpinterest = derive2 { name="rpinterest"; version="0.3.1"; sha256="0kkf73byhgzqxw85wda3nh7qsq81pc035vi6z3fhnvb9ssszwakc"; depends=[httr magrittr rjson]; };
-  rpivotTable = derive2 { name="rpivotTable"; version="0.2.0"; sha256="0h7za8bmyg7b150l7a2jz6czxdh4gi0q0gv6ddpdlgk86slw9nmh"; depends=[htmlwidgets]; };
+  rpivotTable = derive2 { name="rpivotTable"; version="0.3.0"; sha256="0ndhsw4nnz6wf0v8dh4sz8867m01jjkzw6aq7f490z1ypa3d9fv5"; depends=[htmlwidgets]; };
   rplos = derive2 { name="rplos"; version="0.8.0"; sha256="0l38zllzklsy6q2l2r0v2x8wcsldnxjhilcsq5ykl1k35gbva19y"; depends=[crul dplyr ggplot2 jsonlite lubridate plyr reshape2 solrium whisker]; };
   rplotengine = derive2 { name="rplotengine"; version="1.0-6"; sha256="1x9lf5h6cmjyi5xyvmk2ii2dwkwmjqbg0m1fhfabay0flqc7qdm0"; depends=[xtable]; };
   rpms = derive2 { name="rpms"; version="0.2.1"; sha256="14fljzxpxbsx5x06aq39rdq8h25n0z6bq7g7ncgjp1lgk9ml6gdq"; depends=[Rcpp RcppArmadillo]; };
   rpn = derive2 { name="rpn"; version="1.0"; sha256="0wk8y4yk6wqzbq5bqv6zncfp9az5vn8xgwh426pk3bxm3v4xi16i"; depends=[BBmisc checkmate]; };
   rpnf = derive2 { name="rpnf"; version="1.0.5"; sha256="07byg0ym4d2cr6fp74z379jhsaw4c0xrwf622dvhwa4frn4anl60"; depends=[]; };
   rportfolios = derive2 { name="rportfolios"; version="1.0-1"; sha256="00xxh85jpl0rw8fv84i7zmq0psc92pq7hharnr4szbmhgz8kbc35"; depends=[truncdist]; };
-  rpostgis = derive2 { name="rpostgis"; version="1.3.0"; sha256="09q54si187wv2bh2akrdan3d1klx9jczi6bllpl5iwjp1wasxiys"; depends=[DBI raster rgeos RPostgreSQL sp]; };
+  rpostgis = derive2 { name="rpostgis"; version="1.4.0"; sha256="0rgi7ax2n2fln12501zshwaz23nns9qk4vy1ylnaqb4bg0x30gn4"; depends=[DBI raster rgeos RPostgreSQL sp]; };
   rpostgisLT = derive2 { name="rpostgisLT"; version="0.5.0"; sha256="0dvzprhwdqm763b0n82vzj4blns9chlcpp7wkrsm1w67zakn02mk"; depends=[adehabitatLT DBI rpostgis RPostgreSQL sp testthat]; };
   rpql = derive2 { name="rpql"; version="0.5"; sha256="1d5mr04jk08l617zkqn13njglwj0w9an1rix937bcxw69blshahi"; depends=[gamlss_dist lme4 MASS Matrix mvtnorm]; };
   rprev = derive2 { name="rprev"; version="0.2.4"; sha256="1krrplgi2qfcm5kdz2am8fq8kjx67gjwxyd4ylf406r18xbvjd1d"; depends=[doParallel dplyr foreach ggplot2 lazyeval magrittr rms survival tidyr]; };
   rprime = derive2 { name="rprime"; version="0.1.0"; sha256="1v6n1qi0i7x8xgizbyvp1mnwc316lsan4rvam44fgjj45fcd79gd"; depends=[assertthat plyr stringi stringr]; };
   rprintf = derive2 { name="rprintf"; version="0.2.1"; sha256="0rwqpln0igxb4m6d6jyp7h3shfb8sbp0kj7cgkffjp88hn9qm4h3"; depends=[stringi]; };
-  rprojroot = derive2 { name="rprojroot"; version="1.2"; sha256="1fgyxv1zv04sllcclzz089xl6hpdzac7xk61l0l4acb7rqsx5d18"; depends=[backports]; };
-  rpsftm = derive2 { name="rpsftm"; version="1.2.1"; sha256="0i7m405gi8h1pmxhqm3xxy3i322hp6al898sgxhlsy4rqb8pmljj"; depends=[ggplot2 rootSolve survival]; };
+  rprojroot = derive2 { name="rprojroot"; version="1.3-2"; sha256="12r3fdxmi2pmwn6ic3rhg0b20ll5z420m0d8fziv1n21961namnz"; depends=[backports]; };
+  rpsftm = derive2 { name="rpsftm"; version="1.2.2"; sha256="0xfw2rc8k9nnwzmzf803w5aarhm09hvi8ry5gi21d9n8fxsj1q97"; depends=[ggplot2 rootSolve survival]; };
   rpst = derive2 { name="rpst"; version="1.0.0"; sha256="10cbgj67lqgh5bawwa0nwj9kfl3jg4vdm121kc61q199v8dw7nrz"; depends=[plotrix survival]; };
   rpsychi = derive2 { name="rpsychi"; version="0.8"; sha256="1h40kbqvvwwjkz5hrclj6j22zhav3yyfbbhqahs1whwjkksnam4w"; depends=[gtools]; };
-  rptR = derive2 { name="rptR"; version="0.9.2"; sha256="0qa9ml4kmmm0r06akf9azra0z3903w1qfi2zkvzhxahp508l20gs"; depends=[lme4 pbapply]; };
+  rptR = derive2 { name="rptR"; version="0.9.21"; sha256="0wqh9d372s2222qm5w0wx77l2sj7zvdnl7zvxcn5wfs3cz84fj15"; depends=[lme4 pbapply]; };
   rpubchem = derive2 { name="rpubchem"; version="1.5.10"; sha256="06j9ir65ykky5hdbyv74fnddwqd39jxvr6jig0kjqisc75k4spjz"; depends=[base64enc car data_table fingerprint iterators itertools RCurl RJSONIO stringr XML]; };
   rqPen = derive2 { name="rqPen"; version="2.0"; sha256="13m21v753njaramgpbhn0lb793b6946crv5v8vl127w38q0z3wyd"; depends=[quantreg regpro]; };
+  rquery = derive2 { name="rquery"; version="0.3.1"; sha256="1lgcky7rh7awabp4rfmn55c3dhfpkxqhnz2phq1ph727x5kldw22"; depends=[DBI RSQLite wrapr]; };
   rr = derive2 { name="rr"; version="1.4"; sha256="1c2h6ibjfwrjfqh1if3c90pdh0g2rf3p71j4p9w23xbbrx2l80pl"; depends=[arm coda magic MASS]; };
-  rrBLUP = derive2 { name="rrBLUP"; version="4.5"; sha256="19xzlmbi43nywyxcydcjzbs9a175fcwps5ndnvkz7xp2g3lnpcdq"; depends=[]; };
+  rrBLUP = derive2 { name="rrBLUP"; version="4.6"; sha256="1bw4pjj9hm9ik5bvvklnlkykhlqm6k7pbkma1iwc3kbg8shpbd18"; depends=[]; };
   rrBlupMethod6 = derive2 { name="rrBlupMethod6"; version="1.3"; sha256="1qwv954mhry46ff2ax48xcmnasygi5alv8d413g3qbk2da6i0d8l"; depends=[]; };
   rrcov = derive2 { name="rrcov"; version="1.4-3"; sha256="0kagqggi634mvrhd67ia7mpjrj5v6w2wq0z3kyppg5xkvzh335nq"; depends=[cluster lattice mvtnorm pcaPP robustbase]; };
   rrcov3way = derive2 { name="rrcov3way"; version="0.1-10"; sha256="0ybl759mfva185z2mjs5s8cjim9h8dk4gkqnva2rj9kxp7i45srd"; depends=[robustbase rrcov ThreeWay]; };
   rrcovHD = derive2 { name="rrcovHD"; version="0.2-5"; sha256="1wv50lcjf0fsxb1zagxbrcx68ilfmnmkc8ccpy9hw3qql5p368ij"; depends=[pcaPP pls robustbase robustHD rrcov spls]; };
   rrcovNA = derive2 { name="rrcovNA"; version="0.4-9"; sha256="1qc9xqm5x55dqjx1y7s4a2nwc07v32rygicbb8469knxasf92cs3"; depends=[cluster lattice norm robustbase rrcov]; };
-  rrecsys = derive2 { name="rrecsys"; version="0.9.7.2"; sha256="0mvvqfl1vlsgm8k2mdk00vnv1bjh25gpfv9nk8ysxl3znn10xyhy"; depends=[ggplot2 knitr MASS Rcpp registry]; };
+  rrecsys = derive2 { name="rrecsys"; version="0.9.7.3"; sha256="034p7ncnzlkniicl5nd58m9wjy7mc00f027zpg5das226svhfywf"; depends=[ggplot2 knitr MASS Rcpp registry]; };
   rredis = derive2 { name="rredis"; version="1.7.0"; sha256="0wzamwpmx20did8xj8x9dllri2ps83viyqjic18ari7i4h1bpixv"; depends=[]; };
   rredlist = derive2 { name="rredlist"; version="0.4.0"; sha256="0j2hab26zs9dyg9fggza7yffbvwvnmrk5frbfs2ys8h3hg2x6ncy"; depends=[crul jsonlite]; };
   rrefine = derive2 { name="rrefine"; version="1.0"; sha256="1lh3vddrp5k9bhz5spv93w0qm9z5lskpdgxfksys0l3275hzx1lm"; depends=[httr readr rlist]; };
-  rreg = derive2 { name="rreg"; version="0.1.1"; sha256="1hh7r7cn2b3r5iaz7j9z2v8lhncijfw479ggy368fxi0vm5mdqq0"; depends=[directlabels ggplot2]; };
+  rreg = derive2 { name="rreg"; version="0.1.2"; sha256="06zang5m39bla4c5wxb9p4fgrn66a69l190z5gnsyp8r6b166x3p"; depends=[directlabels ggplot2]; };
   rrepast = derive2 { name="rrepast"; version="0.6.0"; sha256="1d6nk6437c4bxbyvpzdlgd1kxh651979m0k7aadi9fl77i5k2x3w"; depends=[digest ggplot2 gridExtra lhs rJava sensitivity xlsx]; };
   rriskDistributions = derive2 { name="rriskDistributions"; version="2.1.2"; sha256="1d9dwgw8la8wwq9cdnl7qibkzbdl4cj0qvf05x7w13ip973dwpaq"; depends=[eha mc2d msm tkrplot]; };
   rrlda = derive2 { name="rrlda"; version="1.1"; sha256="06n9jah190cz25n93jlb5zb0xrx91bjvxgswwdx9hdf0fmwrpkvz"; depends=[glasso matrixcalc mvoutlier pcaPP]; };
   rroad = derive2 { name="rroad"; version="0.0.4"; sha256="1zs21j6rhdab8qrw2ybxnj8lyvbzmxs4zzfskh4npd22w5yy597c"; depends=[]; };
-  rrpack = derive2 { name="rrpack"; version="0.1-6"; sha256="0x18z97spg6k29b39k283lp7k2ipfa4gwqrzdxpljgkkdicjs4fv"; depends=[ggplot2 glmnet lassoshooting MASS Rcpp RcppArmadillo]; };
+  rrpack = derive2 { name="rrpack"; version="0.1-7"; sha256="0svrw2ik59hjyfb0kag4nv8ilcaz7irmkp7ndbxxn0jg7dacb411"; depends=[ggplot2 glmnet lassoshooting MASS Rcpp RcppArmadillo]; };
   rrr = derive2 { name="rrr"; version="1.0.0"; sha256="0sv6k70mv325yjm8yjy4dw8cqc0xc071iiv94fk1l1yfz0n67prz"; depends=[dplyr GGally ggplot2 magrittr MASS plotly Rcpp]; };
-  rsMove = derive2 { name="rsMove"; version="0.2.1"; sha256="1vi4gb30sibmyvng56r0m4fl256ql5838nnarc9mjfm8hiq67rdy"; depends=[caret gdalUtils ggplot2 httr ncdf4 raster RCurl rgdal sp XML]; };
+  rsMove = derive2 { name="rsMove"; version="0.2.3"; sha256="0s256ifiq76rakabw2jn5jslsdd0r55cy7hm55214pgjfq8fiqpi"; depends=[caret gdalUtils ggplot2 raster RCurl rgdal sp]; };
   rsae = derive2 { name="rsae"; version="0.1-5"; sha256="1f3ry3jwa6vg2vq2npx2pzzvfwadz8m48hjrqjk860nfjrymwgx5"; depends=[]; };
   rsample = derive2 { name="rsample"; version="0.0.2"; sha256="10lmpy4ca045j2fxbz5xzl1w9242dkp6sc8hhrk0fxs0dkfb7amf"; depends=[broom dplyr purrr recipes rlang tibble tidyr]; };
   rsatscan = derive2 { name="rsatscan"; version="0.3.9200"; sha256="00vgby24jknq8nl7rnqcwg7gawcxhwq8b7m98vjx2hkqx39n4g21"; depends=[foreign]; };
-  rscala = derive2 { name="rscala"; version="2.5.0"; sha256="1mbjq9smx0wxpwb47n4ak8yxf1zrq45ndg8gy1lcygbrnlcfa488"; depends=[]; };
+  rscala = derive2 { name="rscala"; version="2.5.1"; sha256="0az638dlg7nqhj7xf1bwcpv9anqqcif8ni4a8q68lcn2sxb4wamp"; depends=[]; };
   rscimark = derive2 { name="rscimark"; version="1.0"; sha256="1jsjz4d5bnxb90qqzz42m4nyvm8d8w8bs0m1r5g2n78zmckqb8vy"; depends=[checkmate]; };
   rsconnect = derive2 { name="rsconnect"; version="0.8.5"; sha256="0y2sajcw1yngig06l7bxzcw993jbx13fl47fag9fa4f70qpnnwmq"; depends=[digest packrat PKI RCurl RJSONIO rstudioapi yaml]; };
   rscopus = derive2 { name="rscopus"; version="0.5.3"; sha256="1d6265ffmhd6ajlp607y5jy77nqgcrdym6w1j8vnil0705z3swzb"; depends=[httr plyr tidyr]; };
-  rscorecard = derive2 { name="rscorecard"; version="0.5.0"; sha256="0kgdv64vqbd6ik7mxf7awfk6bgvd0ng3ngz2alhg1v4gwhpj10dp"; depends=[dplyr httr jsonlite lazyeval magrittr]; };
+  rscorecard = derive2 { name="rscorecard"; version="0.6.0"; sha256="142i64faqindaqd14yylbs2ynxg8n5rzl4w0ya0lxv8kwkj0fg75"; depends=[dplyr httr jsonlite lazyeval magrittr]; };
   rsdepth = derive2 { name="rsdepth"; version="0.1-5"; sha256="064jbb6gnx0sm41w3sbi6mvsbzsfkjqfici6frk8sfm9ybvm591j"; depends=[]; };
-  rsdmx = derive2 { name="rsdmx"; version="0.5-10"; sha256="0vr86n22c7nxdgg3zgm2gwngm036kdv9b56cj35a5zvn0gb3xysq"; depends=[plyr RCurl XML]; };
+  rsdmx = derive2 { name="rsdmx"; version="0.5-11"; sha256="06sjkjl9y2fg2yz740a1z5zn4afnjfv1nsykszxsnwn7s23rxi31"; depends=[plyr RCurl XML]; };
   rsed = derive2 { name="rsed"; version="0.1.2"; sha256="1rk7wkidvdn1d39a11cbgglz2dg74bbv3v1ijjdx903kgwg3nnrc"; depends=[Smisc]; };
   rseedcalc = derive2 { name="rseedcalc"; version="1.3"; sha256="18zmpjv6g8f7pmvqlp6khxyys9kdnq5x4zxwb6gwybsh4jxrymkp"; depends=[]; };
   rsem = derive2 { name="rsem"; version="0.4.6"; sha256="16nsbp4s20396h2in0zymbpmsn24gqlbik0vgv86zhy1yg1rz9ia"; depends=[lavaan MASS]; };
   rsgcc = derive2 { name="rsgcc"; version="1.0.6"; sha256="12f8xsg6abmhdgkrrc8sfzmv4i1pycq1g0jfad664d17yciw7rhh"; depends=[biwt cairoDevice fBasics gplots gWidgets gWidgetsRGtk2 minerva parmigene snowfall stringr]; };
   rsggm = derive2 { name="rsggm"; version="0.3"; sha256="17yzvd5vs2avp0nzk7x9bi4d7p6n9nv7675qpgfpwkfqp25lax73"; depends=[glasso MASS Matrix QUIC]; };
   rsig = derive2 { name="rsig"; version="1.0"; sha256="129k78i8kc30bzlphdb68vv3sw2k6xyiwrhw08vhzz6mf3jxlqsh"; depends=[BBmisc glmnet Matrix superpc survcomp survival]; };
+  rsimsum = derive2 { name="rsimsum"; version="0.2.0"; sha256="14vx8h404sbdplqd71jawh82r937y9hap7dc2xpc246qnqd03i9f"; depends=[checkmate ggplot2]; };
   rslp = derive2 { name="rslp"; version="0.1.0"; sha256="06glpdsd309058kxww114j9sshvj6gw9g5sdm4zkmzq3cl91fa6h"; depends=[magrittr plyr stringi stringr]; };
   rslurm = derive2 { name="rslurm"; version="0.4.0"; sha256="1ck4ky5d0pf8hnxz1ijbjk0nfyj1hfnhf9la5qrqw2spa09z82ki"; depends=[whisker]; };
   rsm = derive2 { name="rsm"; version="2.9"; sha256="1rj2qdlv44hbv1ipv7hdpssn90ypp6bfc7nqdaf9dak0bd6khwni"; depends=[estimability]; };
-  rsml = derive2 { name="rsml"; version="1.3"; sha256="0a1y41jq0yzr19mb2scwhlp9gx5vngm4q12yxp1fcwk2cqhnsda6"; depends=[rgl XML]; };
   rsnps = derive2 { name="rsnps"; version="0.2.0"; sha256="10g1b2i2mp0b4p78iiy83sz2jwz73xfjkhc6ih4ag2wmbdmwf9pb"; depends=[httr jsonlite plyr stringr XML]; };
   rsoi = derive2 { name="rsoi"; version="0.3.0"; sha256="0syl90akbbg50pyhsa4nyq2r4psi2n6qg48a4nxprgz412n8rjbv"; depends=[dplyr lubridate readr]; };
   rsolr = derive2 { name="rsolr"; version="0.0.8"; sha256="1swhg7hnkdphnw0d9jrzn18nk2v5a6ny7n652fh8d0k88a27xx4d"; depends=[BiocGenerics graph RCurl restfulr rjson S4Vectors XML]; };
   rspa = derive2 { name="rspa"; version="0.2.1"; sha256="0m3h25jxfccdqy4gf3cls4wcdpw580yfmb3lvw4ndfva8lj2q6sy"; depends=[lintools validate]; };
   rsparkling = derive2 { name="rsparkling"; version="0.2.2"; sha256="0ji7890ba6ry553kgffsgsqmk5lawg3jyd4y6y59a2a4ysvvwq8z"; depends=[h2o sparklyr]; };
-  rsq = derive2 { name="rsq"; version="1.0"; sha256="151f7pngx54wpawb5hchacj0rbymdzyki16fkj9291cfz1cqbcx9"; depends=[MASS]; };
+  rsq = derive2 { name="rsq"; version="1.0.1"; sha256="1c7604g48rcsbfk66xfwia1jaxlqsjiw19zx9pg51n8d6c0l17zb"; depends=[MASS]; };
   rstack = derive2 { name="rstack"; version="1.0.0"; sha256="19vbfmkd6ymadah1y1w5rn52f4hviddccyc6qj2cv5viqwbwws2z"; depends=[R6]; };
   rstackdeque = derive2 { name="rstackdeque"; version="1.1.1"; sha256="0i1qqbfj0yrqbkad8bqc1qlxmyxpn7zycbnq83cdmfbilcmi87ql"; depends=[]; };
-  rstan = derive2 { name="rstan"; version="2.16.2"; sha256="0irqh4ggk23s3c0ipihwv8m0qmkxh5j7vdxgnsarhqca6254r2vb"; depends=[BH ggplot2 gridExtra inline Rcpp RcppEigen StanHeaders]; };
-  rstanarm = derive2 { name="rstanarm"; version="2.15.3"; sha256="00x4ayqp31sypzhbdg6pv627w1p134qlgn7jvgxszihc7dcfb7fg"; depends=[bayesplot BH ggplot2 lme4 loo Matrix nlme Rcpp RcppEigen rstan rstantools shinystan StanHeaders]; };
+  rstan = derive2 { name="rstan"; version="2.17.3"; sha256="10fdasqbdwlisnm7hjmgl5f027ypfhni86d1c5fykb09g1pvkjz3"; depends=[BH ggplot2 gridExtra inline Rcpp RcppEigen StanHeaders]; };
+  rstanarm = derive2 { name="rstanarm"; version="2.17.3"; sha256="196fi09fpxf3v0kbdf6ci6f8c0mw1vx3g30cmkvl5rm17abhwifs"; depends=[bayesplot BH ggplot2 lme4 loo Matrix nlme Rcpp RcppEigen rstan rstantools shinystan StanHeaders survival]; };
   rstansim = derive2 { name="rstansim"; version="0.1.1"; sha256="09hg4ishzp6q90nrl94h21al0ad0jn7fr8brp8f0xa9cvkwlzjpg"; depends=[doRNG doSNOW foreach loo Rcpp rstan]; };
-  rstantools = derive2 { name="rstantools"; version="1.3.0"; sha256="080mn4yh7fhd5qww1zr6l14gfsk5d6fakm8x2lmsqkn42j2i6cw9"; depends=[]; };
+  rstantools = derive2 { name="rstantools"; version="1.4.0"; sha256="1k1nhcy0d2lcnllrdslk4p2d6cp12s5v2vzl5j7l9c7l24syq2ar"; depends=[]; };
   rstatscn = derive2 { name="rstatscn"; version="1.1.1"; sha256="0aj4x3lyrldpgh90v90qbxylndacn5ri5yqff3qy53q45ar7yji3"; depends=[httr jsonlite]; };
   rstiefel = derive2 { name="rstiefel"; version="0.10"; sha256="0b2sdgpb3hzal34gd9ldd7aihlhl3wndg4i4b3wy6rrrjkficrl1"; depends=[]; };
   rstpm2 = derive2 { name="rstpm2"; version="1.4.1"; sha256="0pgy9a8llj0zzzc06afzd0w11mdbx3xvmjf0qpzvsid1zqdbcqxr"; depends=[bbmle fastGHQuad mgcv numDeriv Rcpp RcppArmadillo survival]; };
@@ -10191,53 +10395,52 @@ in with self; {
   rsunlight = derive2 { name="rsunlight"; version="0.4.2"; sha256="1m4ya960zjqxbjcjj42gjmdy40ac7m471fkfsd0r6w675qbiiw87"; depends=[httr jsonlite plyr stringr]; };
   rsurface = derive2 { name="rsurface"; version="1.0.2"; sha256="0lmwk8gk9h9np5fp652zvlapfdwgifarmib23dnifn5d904ia2sl"; depends=[plotly rsm]; };
   rsurfer = derive2 { name="rsurfer"; version="0.2"; sha256="14zd8fhak12yha6miwb84085722v5ipk8lagijhc6af291kp70i9"; depends=[gdata stringr]; };
-  rsvd = derive2 { name="rsvd"; version="0.6"; sha256="0vrsgxbbk5n51i1s80bixcxph2ws86zpbdqs81yfvnzghrc99nas"; depends=[]; };
+  rsvd = derive2 { name="rsvd"; version="0.9"; sha256="1d71y4r27gpwsaq195yys301va8wdc2bvwxjk6501f7ma2yhl7y9"; depends=[]; };
   rsvg = derive2 { name="rsvg"; version="1.1"; sha256="17jfspbvlfp2cdw9s4m128rqw5kvb7i5h335569n3518spqmgi4f"; depends=[]; };
   rt3 = derive2 { name="rt3"; version="0.1.2"; sha256="1fqbymkz4csavkxrs26glzrh0kw3qy9x5smgddgda9a1dxh9ljkm"; depends=[]; };
   rtable = derive2 { name="rtable"; version="0.1.5"; sha256="1a9x0qcbp96wg86nbvx25yh5viwvf5sqb41z3cvr5i7br2ji8n5i"; depends=[knitr ReporteRs shiny tidyr xtable]; };
   rtape = derive2 { name="rtape"; version="2.2"; sha256="0q7rs7pc1k1kayr734lvh367j5qig2nnq5mgak1wbpimhl7z3wm7"; depends=[]; };
-  rtdists = derive2 { name="rtdists"; version="0.7-3"; sha256="13fd49c92yh5pb3lnqf7abikp1jzzainqpbs555dg532i7f2j9zx"; depends=[evd gsl msm Rcpp]; };
+  rtdists = derive2 { name="rtdists"; version="0.8-1"; sha256="0chhlnx3zppsxxwnq3h2aykdpm6zcg2nmrdgxfy14yw133fnbykf"; depends=[evd gsl msm Rcpp]; };
   rtematres = derive2 { name="rtematres"; version="0.2"; sha256="1d0vrprvnlk4hl2dbc6px9xn9kx9d1qvlqxd798hzda6qg5wwvf2"; depends=[gdata plyr RCurl XML]; };
   rtext = derive2 { name="rtext"; version="0.1.20"; sha256="0455rwfxmpgb4qb925ildqr4km4ndgqjxgvk90x2dhfivgmmn60k"; depends=[digest hellno magrittr R6 Rcpp RSQLite stringb]; };
   rtf = derive2 { name="rtf"; version="0.4-11"; sha256="04z0s5l9qjlbqahmqdaqv7mkqavsz4yz25swahh99xfwp9plknfl"; depends=[R_methodsS3 R_oo]; };
-  rtfbs = derive2 { name="rtfbs"; version="0.3.5"; sha256="0sdxlw1pkwwlzz2zcw4v8zhlm97lw2j5hbkqssialpa53jwyibyc"; depends=[rphast]; };
+  rtfbs = derive2 { name="rtfbs"; version="0.3.9"; sha256="02irj6c7nfgp42yb5zdmhbr5pi09xgx0z76d1ccfczjf0r1cyvfz"; depends=[rphast]; };
   rticles = derive2 { name="rticles"; version="0.4.1"; sha256="1f2a60jmlsiga377ihhy8sm9amqn7fd91sd4vx682b97hfh3zn39"; depends=[knitr rmarkdown yaml]; };
   rtide = derive2 { name="rtide"; version="0.0.4"; sha256="0i3mf3818s62mmn315brv2axpwiiz646k5hv8z26z7s4ahxavrc0"; depends=[abind datacheckr lubridate magrittr plyr stringr tibble tidyr]; };
   rtiff = derive2 { name="rtiff"; version="1.4.5"; sha256="0wpjp8qwfiv1yyirf2zj0696zb7m7fpzn953ii8vbmgzhakgr8kw"; depends=[pixmap]; };
   rtimes = derive2 { name="rtimes"; version="0.5.0"; sha256="1z8iaxkvd99fnk46vzbw6lax2qayng6s5n1sxn78kvp8py552f61"; depends=[crul data_table dplyr jsonlite tibble]; };
   rtimicropem = derive2 { name="rtimicropem"; version="1.3"; sha256="1z7nrmzwdgz7fy2i23rl07jd39sdxqsdmmmkaaxzagj7whd58inj"; depends=[changepoint dplyr ggplot2 knitr lazyeval lubridate pathological R6 rbokeh readr stringr tibble tidyr]; };
   rtip = derive2 { name="rtip"; version="1.0.0"; sha256="1xkw0m4fnwbsqqyhvxhsia3hlpjb2qhs6y0c4g7f7qa7f0ibcbja"; depends=[boot ggplot2 mvtnorm plyr]; };
-  rtk = derive2 { name="rtk"; version="0.2.5.3"; sha256="1jislv9kw858rv9wkj1ff6d8bfrw0h779d5yhfxw4kgb48jci6rn"; depends=[Rcpp]; };
-  rtkore = derive2 { name="rtkore"; version="1.3.1"; sha256="01jxw1lhnzm25xgm90677gv247ps6x9ky2mcllnj54lsbk8j7gqj"; depends=[Rcpp]; };
-  rtop = derive2 { name="rtop"; version="0.5-10"; sha256="0h35f3wpvsdvvymb2sl8g2wljzqzgis66bkf42njhxry7wavqf17"; depends=[gstat rgdal sp]; };
+  rtk = derive2 { name="rtk"; version="0.2.5.4"; sha256="1nh757l4ih5pmmh7b84ca1f5wpz9mcksdb0a4rvs2hhgap38ihg9"; depends=[Rcpp]; };
+  rtkore = derive2 { name="rtkore"; version="1.5.0"; sha256="15hz9cmc1i9lnifh8bbgr5r8dacn0l38zhn3ldc6wxphn7j8h075"; depends=[Rcpp]; };
+  rtop = derive2 { name="rtop"; version="0.5-13"; sha256="1md9sgsmbc3jv1lc4l6r26830k9vjljjqpzzna4s23bn6ky7glgp"; depends=[gstat rgdal sp]; };
   rtrends = derive2 { name="rtrends"; version="0.1.0"; sha256="04xdggf36m294drb9z8khdjr6fgsg4bwkb4mmbbvqfzjpq4mq4y1"; depends=[dplyr lubridate tidyr]; };
-  rtrie = derive2 { name="rtrie"; version="0.1.1"; sha256="092ir1bm193x8ah2zbyik6vfavdqwzkda5kx4m7mv1gxcy4s64vr"; depends=[]; };
   rtrim = derive2 { name="rtrim"; version="1.0.1"; sha256="134j5sv9dvcq1n37rry7615nr3pa54by6r7ss7fagcmy4lnma2ps"; depends=[]; };
   rts = derive2 { name="rts"; version="1.0-38"; sha256="1m9kir2snfhxyagsflp4cyii33ycw4fr0f8bn7r92757l92i7vr7"; depends=[raster RCurl sp xts zoo]; };
   rtson = derive2 { name="rtson"; version="1.3"; sha256="1gwvk7nmq9bz90jy1zh7lhr735iw804pmwxykdpaigcsnxk7zx03"; depends=[R6]; };
   rtweet = derive2 { name="rtweet"; version="0.6.0"; sha256="0bh483wfl4f8xscdyv3ys5hhdabc91dynlbqlxxv8mil7pgg3chg"; depends=[bit64 httr jsonlite magrittr openssl readr tibble]; };
   rtype = derive2 { name="rtype"; version="0.1-1"; sha256="0wjf359w7gb1nrhbxknzg7qdys0hdn6alv07rd9wm6zynnn1vwxy"; depends=[]; };
-  rtypeform = derive2 { name="rtypeform"; version="0.3.2"; sha256="01kasx18f98gl4jsgha9w369wwq5akr99p5pk9jcpw34iwjmaxl3"; depends=[httr jsonlite purrr tibble]; };
+  rtypeform = derive2 { name="rtypeform"; version="0.3.3"; sha256="13nqlgi4wwby8ka014ggilnh2m4qr940zbsks27zfd7q56ng7sbq"; depends=[httr jsonlite purrr tibble]; };
+  rubias = derive2 { name="rubias"; version="0.1.0"; sha256="0k8f1aaj3zpxqkhzjfl7iyyx7pjssp5lldajjsghw110j75qksh4"; depends=[dplyr ggplot2 gtools magrittr Rcpp readr rlang stringr tibble tidyr]; };
   rucm = derive2 { name="rucm"; version="0.6"; sha256="1n6axmxss08f2jf5impvyamyhpbha13lvrk7pplxl0mrrrl5g0n8"; depends=[KFAS]; };
   rucrdtw = derive2 { name="rucrdtw"; version="0.1.3"; sha256="0wbh9zbgqf5bk1ix5qry18lhgdqk90pn5xnv401268gldjy4z777"; depends=[Rcpp]; };
-  rugarch = derive2 { name="rugarch"; version="1.3-8"; sha256="07gynjn8lswhj6cngas864ymfkm9pj8qxia4cci3adlv9i1i6bng"; depends=[chron expm ks nloptr numDeriv Rcpp RcppArmadillo Rsolnp SkewHyperbolic spd xts zoo]; };
-  ruler = derive2 { name="ruler"; version="0.1.0"; sha256="1fm82c9lxx0bifqywr4zilzagmnpghh0zg9bnkjyd5m0zm21lx14"; depends=[dplyr keyholder rlang tidyr]; };
+  rugarch = derive2 { name="rugarch"; version="1.4-0"; sha256="0b0rq88v93945g7pr6xin7wfdm8zl2vw8hxwa2kfak4xnrrprsyy"; depends=[chron expm ks nloptr numDeriv Rcpp RcppArmadillo Rsolnp SkewHyperbolic spd xts zoo]; };
+  ruler = derive2 { name="ruler"; version="0.1.1"; sha256="02h931ycsblwxjss9zwim4bxpqfgnyac1sblplcai085nq7fd30h"; depends=[dplyr keyholder rlang tidyr]; };
   runittotestthat = derive2 { name="runittotestthat"; version="0.0-2"; sha256="15zdcvqkr5ivq6wk6dw8k6diginc6z7mdc18pswim90d99j2g9sm"; depends=[assertive RUnit]; };
   runjags = derive2 { name="runjags"; version="2.0.4-2"; sha256="035sxmh0b0m6dwz8qbpsmw2p7ihkx3cxgkhj27i0j6dsjryl3x4p"; depends=[coda lattice]; };
   rusda = derive2 { name="rusda"; version="1.0.8"; sha256="0xx72jjf1pyixwpnvvgx5n2vc5gl46bam1caav043iqki68wb338"; depends=[foreach httr plyr RCurl stringr taxize testthat XML]; };
-  rust = derive2 { name="rust"; version="1.2.3"; sha256="13aa8hq2zzzm1ydcva1067shxasqwhyfc4mxyvp4gsspgbpf8q2n"; depends=[Rcpp RcppArmadillo spatstat]; };
+  rust = derive2 { name="rust"; version="1.3.4"; sha256="1jb970kskl2wdhqcjbxl8gh986abdy96jbipnsdi3656ic5dxivn"; depends=[Rcpp RcppArmadillo spatstat]; };
   ruv = derive2 { name="ruv"; version="0.9.6"; sha256="12zi775nx6k1j9sz691x6r9r0arfnhwddf5nxbr1xk25dj9qa210"; depends=[]; };
   rv = derive2 { name="rv"; version="2.3.2"; sha256="108s9q19h5ypxb9w4a8nk97js261izag1sf75g4xfqblwxxrbflc"; depends=[]; };
   rvHPDT = derive2 { name="rvHPDT"; version="3.0"; sha256="05nrfnyvb8ar7k2bmn227rn20w1yzkp1smwi4sysc00hyjrlyg8s"; depends=[gtools]; };
   rvTDT = derive2 { name="rvTDT"; version="1.0"; sha256="09c2fbqnlwkhaxfmgpsdprl0bb447ajk9xl7qdlda201fvxkdc8v"; depends=[CompQuadForm]; };
-  rvalues = derive2 { name="rvalues"; version="0.6"; sha256="075lfbqjzi103wh87i78x914iyrvrmmdz8z9f6391rbpip6bjpr3"; depends=[]; };
   rvcheck = derive2 { name="rvcheck"; version="0.0.9"; sha256="14pa7fa7yyhmk0v5md7x5xr5jd4gjwjlvgbynnhq30fj56qffyvf"; depends=[]; };
   rversions = derive2 { name="rversions"; version="1.0.3"; sha256="0i2gi05nrvknr7g89rbppkswyfcwwd4r9gp75fdfhpah8sgq1l11"; depends=[curl xml2]; };
   rvertnet = derive2 { name="rvertnet"; version="0.6.2"; sha256="12qffkkl3yqiqh0zi4zrj6irv7jnylja7fv21h3fnjpvqwkazv8a"; depends=[crul dplyr ggplot2 jsonlite maps]; };
   rvest = derive2 { name="rvest"; version="0.3.2"; sha256="04mv99z8dixywx96kfy4215g6ib23s7qvd77hcf9pxqxzcvqhvhd"; depends=[httr magrittr selectr xml2]; };
-  rvg = derive2 { name="rvg"; version="0.1.6"; sha256="1cbzb4m2nj51xlfgv5wm3skwkgjmzikjnbak8dh0bmybk1i6ywmx"; depends=[gdtools officer Rcpp xml2]; };
+  rvg = derive2 { name="rvg"; version="0.1.8"; sha256="03hank94b5d1spig9jzrm5h2xbipi8skwqjg8sfwxwy5sjyrbaam"; depends=[gdtools officer Rcpp xml2]; };
   rvgtest = derive2 { name="rvgtest"; version="0.7.4"; sha256="1lhha5nh8fk42pckg4ziha8sa6g20m0l4p078pjj51kz0k8929ng"; depends=[]; };
-  rvinecopulib = derive2 { name="rvinecopulib"; version="0.2.3.1.0"; sha256="1pwpx1byfmldgzmgqr684rbbm77sirdj8l0fqr4a02prnp8wggaz"; depends=[BH lattice Rcpp RcppEigen RcppThread]; };
+  rvinecopulib = derive2 { name="rvinecopulib"; version="0.2.5.1.0"; sha256="122h7nncgkgq0qchb5apiicwx94zr40i7fwm7x1718qxi7npz8wh"; depends=[BH lattice Rcpp RcppEigen RcppThread]; };
   rwalkr = derive2 { name="rwalkr"; version="0.3.2"; sha256="0vp7iizc6bn3y30vcrvksy91aiid52q01vgzjphc5m5sy99gsxj2"; depends=[dplyr httr tibble tidyr]; };
   rwars = derive2 { name="rwars"; version="1.0.0"; sha256="0kmwpr6gn3xsf0pqx153vblpjbhc34mzlgyv8xb2nw78nf8znfij"; depends=[httr]; };
   rwc = derive2 { name="rwc"; version="1.1"; sha256="0gdpskj87wjnpas90i3iqn1qv6frrki2xqiyyakg3zpaviw1imag"; depends=[MASS Matrix mvtnorm raster]; };
@@ -10248,12 +10451,12 @@ in with self; {
   rwty = derive2 { name="rwty"; version="1.0.1"; sha256="1w66jlcbn8javlr2l0qinah3cxxadpjzvbz088saysyg277ikfxm"; depends=[ape coda GGally ggdendro ggplot2 phangorn plyr reshape2 viridis]; };
   rwunderground = derive2 { name="rwunderground"; version="0.1.7"; sha256="1mdqlijjximfxqd9bx4hnsayq9h3ss7fp3hr2vxx2qb60b0fjx67"; depends=[countrycode dplyr httr lubridate]; };
   rxSeq = derive2 { name="rxSeq"; version="0.99.3"; sha256="0g0n2pzbssz61psghjp1vrlspgph4s39x1k1zhcz7ivdn5pjb2nx"; depends=[MASS numDeriv VGAM]; };
-  rxylib = derive2 { name="rxylib"; version="0.2.0"; sha256="0x02mapz5ym9sd5cq4c077sa39ykdgn0rzmj43ws0mm9fs9li8w9"; depends=[BH Rcpp]; };
+  rxylib = derive2 { name="rxylib"; version="0.2.1"; sha256="0qfdd7z9as6igc82i8dbvjz03jk8scxz599jw8xm69y5qs5zf104"; depends=[BH Rcpp]; };
   ryouready = derive2 { name="ryouready"; version="0.4"; sha256="1d9z3paxcrkwsgn5g83x57jwz2iqarks30x0bwg48i5ispw6xbr3"; depends=[car ggplot2 stringr]; };
   rysgran = derive2 { name="rysgran"; version="2.1.0"; sha256="1l2mx297iyipap8cw2wcw5gm7jq4076bf4gvgvij4q35vp62m85z"; depends=[lattice soiltexture]; };
   rzmq = derive2 { name="rzmq"; version="0.9.3"; sha256="04rb54gr1wr0nczxnhk5jbk9ar65yn2vs8bsa41i1hfhzjhnsvxb"; depends=[]; };
-  s2 = derive2 { name="s2"; version="0.1-1"; sha256="1k6329ra119ygb0z496894s4yra7f4dsg1ghpdk8k3ashd9yh6gd"; depends=[Rcpp]; };
-  s20x = derive2 { name="s20x"; version="3.1-25"; sha256="1nl3cqxyx6fc0wrgnl6786qdalf637mz6fdi4m2m323j72zk67x7"; depends=[]; };
+  s2 = derive2 { name="s2"; version="0.3-0"; sha256="16258mmp4rkfpqa6255s7fdd44why0vky2rxb52440fgpwic5zdq"; depends=[Rcpp]; };
+  s20x = derive2 { name="s20x"; version="3.1-26"; sha256="1p931r8y4c9fac8x29sxw33q1knfjf78saj348mxddaaqrf90v1n"; depends=[]; };
   s2dverification = derive2 { name="s2dverification"; version="2.8.0"; sha256="13cjzxrjwahjhdw5q8lpbwgywgswqrcnj7rkff9kraan9lj83bkk"; depends=[abind bigmemory GEOmap geomapdata mapproj maps NbClust ncdf4 plyr SpecsVerification]; };
   s4vd = derive2 { name="s4vd"; version="1.1-1"; sha256="1rp3z42nxmrvb942h3c5cl544lngzx7nrnnr4zjw7dq495bym7yp"; depends=[biclust foreach irlba]; };
   sAIC = derive2 { name="sAIC"; version="1.0"; sha256="1ih63cfs98kb61gwbmrx2yq7iacb5qa1qrh1a264041qd27r5pj5"; depends=[]; };
@@ -10262,8 +10465,8 @@ in with self; {
   sEparaTe = derive2 { name="sEparaTe"; version="0.2.1"; sha256="0k1c0wa052f1fprc9jn0i3g2cawxfhkan998jlhkr4iy986jynw9"; depends=[]; };
   sExtinct = derive2 { name="sExtinct"; version="1.1"; sha256="1l6232z6c4z3cfl1da94wa6hlv9hj5mcb85fj1y0yparkvvl8249"; depends=[lattice]; };
   sFFLHD = derive2 { name="sFFLHD"; version="0.1.1"; sha256="19zhx0rc6h44301a5q68r9jbxzh12ci3387d1c319vdiw05nschy"; depends=[conf_design DoE_base]; };
-  sGPCA = derive2 { name="sGPCA"; version="1.0"; sha256="16aa5jgvkabrlxaf1p7ngrls79mksarh6di3vp26kb3d3wx087dx"; depends=[fields Matrix]; };
   sNPLS = derive2 { name="sNPLS"; version="0.3.0"; sha256="0qb7l42hxi3sgdmc52j5hr9gz7fv5jx9qrwcyspzq671s4d1zsq1"; depends=[car ggplot2 ks MASS Matrix pbapply plotrix rgl]; };
+  sRDA = derive2 { name="sRDA"; version="1.0.0"; sha256="0g11smn4adm3b79m9w7wzcragxggkf8rrrsgj2yzdhm1d7zzjwbk"; depends=[doParallel elasticnet foreach Matrix mvtnorm]; };
   sROC = derive2 { name="sROC"; version="0.1-2"; sha256="0cp6frhk9ndffb454dqp8fzjrla76dbz0mn4y8zz1nbq1jzmz0d3"; depends=[]; };
   sSDR = derive2 { name="sSDR"; version="1.2.0"; sha256="1fqsglqzsbzdvcdnwwf7mg6x20zfpw66x63r6avac3w1pz3n7kvx"; depends=[MASS Matrix]; };
   sValues = derive2 { name="sValues"; version="0.1.4"; sha256="0y2cv3wls2y3zpbm2d098xj5n098yjl32yi7mwha6mhfwfa4y99l"; depends=[caTools ggplot2 reshape2]; };
@@ -10283,9 +10486,10 @@ in with self; {
   safi = derive2 { name="safi"; version="1.0"; sha256="1km58w57kdmyfj4a97zhnjcka4q4pxm8r2br01qq2niaihpbzp98"; depends=[]; };
   samon = derive2 { name="samon"; version="4.0.0"; sha256="0pvv93ahh0i69ncc3sic9481wd5rv5dfxysxyzkl61ds3yvrr09v"; depends=[]; };
   sampSurf = derive2 { name="sampSurf"; version="0.7-4"; sha256="0azs8d1d4cp5vzrlzpn2lbqmbha6rxq109apg6hr2hf7i81g19d7"; depends=[boot lattice latticeExtra raster rasterVis sp]; };
-  sampleSelection = derive2 { name="sampleSelection"; version="1.0-4"; sha256="0by6l20hsaqvkcxpvn7lr6p2g78lb1464dygp7x4h8sq1fc4j4av"; depends=[Formula maxLik miscTools mvtnorm systemfit VGAM]; };
+  sampleSelection = derive2 { name="sampleSelection"; version="1.2-0"; sha256="1s3p5fvvxkjkm6vjpxi3rw8ncbmyvqpfb0gghcvf2sspdyzam1s2"; depends=[Formula maxLik miscTools mvtnorm systemfit VGAM]; };
   samplesize = derive2 { name="samplesize"; version="0.2-4"; sha256="0n6z7jmf665lbj3g1mjy87a9fh53z85546bhrkmkgsysb0r9q6iq"; depends=[]; };
   samplesize4surveys = derive2 { name="samplesize4surveys"; version="3.1.2.400"; sha256="16q8pird6ic7001i3gkwqb2rlak9l853bf2m1y9njmdprsjs82yl"; depends=[TeachingSampling timeDate]; };
+  samplesizeCMH = derive2 { name="samplesizeCMH"; version="0.0.0"; sha256="0gdywqmylid4fkz5syzf1wgcan71whhm9gjylmsg4p05hlwvpv1d"; depends=[]; };
   samplesizelogisticcasecontrol = derive2 { name="samplesizelogisticcasecontrol"; version="0.0.6"; sha256="1xznql86r6snkkmk9g05jhdam06pr0qmg40mdzasl291nc50v5aa"; depends=[mvtnorm]; };
   sampling = derive2 { name="sampling"; version="2.8"; sha256="06pj7dan0mknpsblmlnk7am78qrnwgnql5vvx7vmbfvib7rj6s9m"; depends=[lpSolve MASS]; };
   samplingDataCRT = derive2 { name="samplingDataCRT"; version="1.0"; sha256="0ah3fi2sn642c8nicikhjhl1hdsjzshrf1j02swq0jaqggcqjdvk"; depends=[mvtnorm]; };
@@ -10298,6 +10502,7 @@ in with self; {
   sanitizers = derive2 { name="sanitizers"; version="0.1.0"; sha256="1c1831fnv1nzpq8nw9krgf9fm8v54w0gvcn4443b6jghnnbhn2n6"; depends=[]; };
   sankey = derive2 { name="sankey"; version="1.0.2"; sha256="0jvcr2bn69aklfbgj4hbsrc047mymrx0jmsg26m0g6w7n1igqvcw"; depends=[simplegraph]; };
   sanon = derive2 { name="sanon"; version="1.5"; sha256="1iikm7ivlz87kbq0ax9r1dz29zdq1kmhxd2imzc4hkvr1rwgciv6"; depends=[]; };
+  santaR = derive2 { name="santaR"; version="1.0"; sha256="10g4z951mpxw9d21s5f6zwfch5xs9vx812fb0wyrbw9s8drmlbkh"; depends=[doParallel foreach ggplot2 gridExtra iterators pcaMethods plyr reshape2 shiny shinythemes]; };
   sapa = derive2 { name="sapa"; version="2.0-2"; sha256="056xlh14dnzq4x7sbp7ff2k61jxy7110a742b502vz549qfrr5ds"; depends=[ifultools splus2R]; };
   sarima = derive2 { name="sarima"; version="0.5-2"; sha256="00xlfd8hrplxn66k2nfc7ivyacrr6rqgsv9ylsjynibpidvkkn17"; depends=[FitAR FitARMA lagged ltsa PolynomF portes Rdpack]; };
   sas7bdat = derive2 { name="sas7bdat"; version="0.5"; sha256="0qxlapb6wdhzpwlmzlhscy3av7va3h6gkzsppn4sx5q960310an3"; depends=[]; };
@@ -10314,7 +10519,6 @@ in with self; {
   sbmSDP = derive2 { name="sbmSDP"; version="0.2"; sha256="1sl46lqi6w0s7ghv4bywhic56cm2vib3kawprga760m6igargx4y"; depends=[Rcpp RcppArmadillo]; };
   sbrl = derive2 { name="sbrl"; version="1.2"; sha256="1d0f2mlzzcghhvqagrr954qa69b5v47milw3iazxihh8q1qlird2"; depends=[arules Rcpp]; };
   sbtools = derive2 { name="sbtools"; version="1.1.6"; sha256="1wvd7xbkfyx88bi1vz30c6jb20fgsrcgpvkw4g4ym0966vhv1ca1"; depends=[curl httr jsonlite stringr]; };
-  sca = derive2 { name="sca"; version="0.9-0"; sha256="1xqdcxxsrsl8v2i8ifqcgb38vayz8ymay2sw4m9hmpma54a6r9j5"; depends=[]; };
   scaRabee = derive2 { name="scaRabee"; version="1.1-3"; sha256="1yap3hi36f8hk93jn59nxrbgq8iw0xwkkm3pc2gb50cpcpaq41pd"; depends=[deSolve lattice neldermead]; };
   scagnostics = derive2 { name="scagnostics"; version="0.2-4"; sha256="0fhc7d2nfhm8w6s6z1ls6i8d7c90h4q7rb92rz8pgq3xh031hpcf"; depends=[rJava]; };
   scaleboot = derive2 { name="scaleboot"; version="0.3-4"; sha256="16shdj4b8pbdbphqzw7r5xzx6k2qfkr729inv21gkp9qcp4h0vrm"; depends=[mvtnorm pvclust]; };
@@ -10323,20 +10527,21 @@ in with self; {
   scalreg = derive2 { name="scalreg"; version="1.0"; sha256="06iqij1cyiw55ijzk2byrwh3m5iwsra7clx8l4v69rc236q8zbdi"; depends=[lars MASS]; };
   scam = derive2 { name="scam"; version="1.2-2"; sha256="04w0y2l4h3xddb6mzyhf0mcx6kbphrmjyfc59cqw9z88sssfrmm7"; depends=[Matrix mgcv]; };
   scan = derive2 { name="scan"; version="0.20"; sha256="1xyng9dlfmp7n2h91n4xy9lx3jm205gjiizdqk1yj1qw8mmahvqc"; depends=[nlme]; };
-  scanstatistics = derive2 { name="scanstatistics"; version="1.0.0"; sha256="0mgrjkn4yhpyjv313d4arnaipv107nlcbkqzvkv6b2c97z57mpds"; depends=[dplyr emdbook gamlss_dist ismev magrittr plyr purrr Rcpp RcppArmadillo reliaR sets tibble tidyr]; };
+  scanstatistics = derive2 { name="scanstatistics"; version="1.0.1"; sha256="147fhq34vqkq50bw0g3a112048s5jaxxcwm3iv5wykp8zl45msmz"; depends=[dplyr emdbook ismev magrittr plyr purrr Rcpp RcppArmadillo reliaR sets tibble tidyr]; };
   scape = derive2 { name="scape"; version="2.3-1"; sha256="0maccnkhn7wf6brwnb5b7nh2yx3afx0h7kji2475mvg19909mddq"; depends=[coda Hmisc lattice]; };
   scar = derive2 { name="scar"; version="0.2-1"; sha256="04x42414qxrz8c7xrnmpr00r46png2jy5giwicdx6gx8jwrkzhzs"; depends=[]; };
+  scatr = derive2 { name="scatr"; version="1.0.1"; sha256="1c2z722i7d7qflh4mzb8kkix5i22wph98kwz2p98x2mhaml8802d"; depends=[cowplot ggplot2 ggridges ggstance jmvcore R6]; };
   scatterD3 = derive2 { name="scatterD3"; version="0.8.1"; sha256="1fyk2z8ari73nbah2r4c677nm3v0whfia6sh39gr674cczp6vc8q"; depends=[digest ellipse htmlwidgets]; };
-  scatterpie = derive2 { name="scatterpie"; version="0.0.7"; sha256="0bfzhpakdwlps900dnsp6b5hrrmi02jcmk31afp4pixyj3r7h3c8"; depends=[ggforce ggplot2 tidyr]; };
+  scatterpie = derive2 { name="scatterpie"; version="0.0.8"; sha256="1dfwz83hxdms7qglsz540wszzcd5hfmjzw440c93jgi18n6kx9s4"; depends=[ggforce ggplot2 tidyr]; };
   scatterplot3d = derive2 { name="scatterplot3d"; version="0.3-40"; sha256="0ababcj87kx7860mica9y2ydlhskxmgj9n46crx036cila512jc2"; depends=[]; };
   scclust = derive2 { name="scclust"; version="0.1.1"; sha256="1bml4qyyspwaqxzwjhqy8i450614p3f3dj0s0qdkv6psa60h0w5z"; depends=[distances]; };
+  scdensity = derive2 { name="scdensity"; version="1.0.2"; sha256="173xm3bf8vxl30zk4n451al7m003byg9q4d1l1pfyfa4xnv8qdg9"; depends=[lpSolve quadprog]; };
   scdhlm = derive2 { name="scdhlm"; version="0.3.1"; sha256="1b5x4kqvmkpb8wbgfhnwqakisw6hfnvama2bsnd8kvw4alfanxhm"; depends=[nlme]; };
   scenario = derive2 { name="scenario"; version="1.0"; sha256="0v1b00kiny21yx4qkk2x51cy1zqibdnd68z76qia7h5py28yhxsi"; depends=[]; };
   schoRsch = derive2 { name="schoRsch"; version="1.4"; sha256="19k34i74ira71v0r5gz9rfnbadnjzi0wpxcm4zqqn7y6jpmfbd11"; depends=[]; };
   scholar = derive2 { name="scholar"; version="0.1.4"; sha256="088clkpllpjv9rjb45v46dga4ig11ifvfyclgfgcgqvxy5cn92jr"; depends=[dplyr httr R_cache rvest stringr xml2]; };
   schoolmath = derive2 { name="schoolmath"; version="0.4"; sha256="06gcmm294d0bs5whvknrq48sk7li961lzy4bcncjg052zbbpn67x"; depends=[]; };
   schumaker = derive2 { name="schumaker"; version="1.0"; sha256="0qsbpza1x6kjs4jizg9fvhg0q5s05b5s6jv7r4fjajq9552dc83c"; depends=[]; };
-  schwartz97 = derive2 { name="schwartz97"; version="0.0.6"; sha256="0l34f30l75zrg3n377jp0cw7m88cqkgzy6ql78mrx8ra88aspfzn"; depends=[FKF mvtnorm RUnit]; };
   scidb = derive2 { name="scidb"; version="2.0.0"; sha256="079akdsxxjnca5jsv0grw1c2nd3dl368xhy4mzm94mh5j6ghi57l"; depends=[bit64 curl data_table digest openssl]; };
   scientoText = derive2 { name="scientoText"; version="0.1"; sha256="0f18hg9s50lbbgl0fqjv45yhynpnsxj8wwm07g126snzr68gbd21"; depends=[stringr tm]; };
   scifigure = derive2 { name="scifigure"; version="0.1.1"; sha256="0wfvg0c9hbdc3ipsnq6nkf7k9hf8yl27aqg012nqk9ynlwp9qa56"; depends=[]; };
@@ -10345,9 +10550,9 @@ in with self; {
   sclero = derive2 { name="sclero"; version="0.2"; sha256="1vqysby822s958msnwcqmz78193vrgmpf6si1jnfb9cj90hh7wgg"; depends=[plyr RImageJROI spatstat]; };
   scmamp = derive2 { name="scmamp"; version="0.2.55"; sha256="17qhj9l1akxachaimy9d5rls8adph8aalj3qr6ckip29a8ma9gf7"; depends=[ggplot2 graph reshape2 Rgraphviz]; };
   score = derive2 { name="score"; version="1.0.2"; sha256="1p289k1vmc7qg70rv15x05dyb92r7s6315whr1ibi40sqln62a5s"; depends=[msm]; };
-  scorecard = derive2 { name="scorecard"; version="0.1.3"; sha256="144laryxla6v8w6lxyrcy0fk4jmmzw5wdjr2v7ckaykzkii3gsni"; depends=[data_table ggplot2 gridExtra]; };
+  scorecard = derive2 { name="scorecard"; version="0.1.5"; sha256="1cf4cmn3csbv1l3nnr3873vszp7xb5v4864g072mwzg7xr1maj4w"; depends=[data_table ggplot2 gridExtra]; };
   scorer = derive2 { name="scorer"; version="0.2.0"; sha256="1mc4hxcrqzh4dmz5fy40740bnrp4fxia81fj3cdw9382p67ivhim"; depends=[Rcpp]; };
-  scoring = derive2 { name="scoring"; version="0.5-1"; sha256="0vxjcbp43h2ipc428qc0gx7nh6my7202hixwhnmspl4f3kai3wkp"; depends=[]; };
+  scoring = derive2 { name="scoring"; version="0.6"; sha256="114jlpbnm15fdan5lr40adxdzwajy3yhdw6dm4kvkvky6qhcx7q5"; depends=[]; };
   scoringRules = derive2 { name="scoringRules"; version="0.9.4"; sha256="0m8050qqb3j0miwfbadp6lmd2q5vicsqn4waw4jszz52fhb8mv27"; depends=[MASS Rcpp RcppArmadillo]; };
   scout = derive2 { name="scout"; version="1.0.4"; sha256="0vr497g7g1xhf75cwjbjsns2fvdzy86iibbf5w0g2xylw82s4lh2"; depends=[glasso]; };
   scpm = derive2 { name="scpm"; version="1.0-2"; sha256="0jrr90lcalchfqmq5c8ja7ws88rpri3gjdc5z4jfpazn2vznx26n"; depends=[geoR interp lattice MASS Matrix mvtnorm RandomFields rgl]; };
@@ -10356,41 +10561,42 @@ in with self; {
   scrime = derive2 { name="scrime"; version="1.3.3"; sha256="1vp7ai10m0f3s0hywyqh0yllxj6z6p795zqpr6vp58fh6yq20x73"; depends=[]; };
   scriptests = derive2 { name="scriptests"; version="1.0-16"; sha256="11l145gvzkxqwbzw976rq94krly1p4lahqw051dwaacarq4hnrdg"; depends=[]; };
   scriptexec = derive2 { name="scriptexec"; version="0.2.1"; sha256="09gaccqadb51ia66xk9vi3p9472s82bg6v8i6ba390g04yipbipi"; depends=[]; };
-  scrm = derive2 { name="scrm"; version="1.7.2-0"; sha256="1i4mdymds8xmxcxzc7a9lcmy2q11gmdgnfbm2hircf07j5pbb2d8"; depends=[Rcpp]; };
+  scrm = derive2 { name="scrm"; version="1.7.2-1"; sha256="123rxx1a13fbv975hp9f9rjcigp8vfai7679wbn9dlyvph5nivaz"; depends=[Rcpp]; };
   scrubr = derive2 { name="scrubr"; version="0.1.1"; sha256="0dqsk6vvc79qmjcr1gdksqzbd064nkyqfj2mxg6z7aifqgxs8zzz"; depends=[lazyeval magrittr Matrix qlcMatrix]; };
-  scrypt = derive2 { name="scrypt"; version="0.1.1"; sha256="0lgnmag2yr5r67kqni2mpbvflqzaq8icilcxqja7c8fzw6xxzjrx"; depends=[Rcpp]; };
   scs = derive2 { name="scs"; version="1.1-1"; sha256="1qx8b73g5v7mjx85lx5bln6j6i9r7m238i7hm8adr2jrbl33532y"; depends=[Matrix]; };
   scuba = derive2 { name="scuba"; version="1.9-1"; sha256="1b92b6p9dn54rmcaw2ng41pvvvkmrzgg12d6zcr3yh8qgi89pvdi"; depends=[]; };
   sdPrior = derive2 { name="sdPrior"; version="0.3"; sha256="0d3w75p3r2h07xhp7fj4si1y4sav8vs0lq6h2h4fn4f2inn3l0vl"; depends=[caTools GB2 MASS]; };
   sda = derive2 { name="sda"; version="1.3.7"; sha256="1v0kp6pnjhazr8brz1k9lypchz8k8gdaby8sqpqzjsj8klghlcjp"; depends=[corpcor entropy fdrtool]; };
   sdat = derive2 { name="sdat"; version="1.0"; sha256="1rp2s3y44f3vj0p16j1k2rrs44kmnzy9k0lpcm9ga801nbv93saz"; depends=[]; };
-  sdcMicro = derive2 { name="sdcMicro"; version="5.0.4"; sha256="169b75i7mapjb90slkx88vwxy39mw4gjsngccly3hhcs08y2vqz2"; depends=[car cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase sets shiny shinyBS VIM xtable]; };
+  sdcMicro = derive2 { name="sdcMicro"; version="5.1.0"; sha256="06rnnm5g7rpbbxgdb9sl7gkcimdbx1qmgzg5d2n0jl4b81jac2n2"; depends=[car cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase sets shiny shinyBS VIM xtable]; };
   sdcTable = derive2 { name="sdcTable"; version="0.22.8"; sha256="134a0g1v5w9airckn1bqp4k7hv2dcl5kmb1hx78nw5s8h92y3gkc"; depends=[data_table lpSolveAPI Rcpp Rglpk slam stringr]; };
   sdcTarget = derive2 { name="sdcTarget"; version="0.9-11"; sha256="18cf276mh1sv16xn0dn8par4zg8k7y8710byxiih6db4i616fjpi"; depends=[doParallel foreach magic tuple]; };
   sddpack = derive2 { name="sddpack"; version="0.9"; sha256="1963l8jbfwrqhqcpif73di9i5mb996r4f8smjyil6l7sdir7cg9l"; depends=[]; };
   sde = derive2 { name="sde"; version="2.0.15"; sha256="0gxyhq9lafd62y68h7fd746a3jz3jdsm0shgwm2ylmp4a2f5cdmm"; depends=[fda MASS zoo]; };
   sdef = derive2 { name="sdef"; version="1.6"; sha256="1y1l5fl7lh636kyvc2hwssdnifl055nrz3riplj4qqw88lkm1mk8"; depends=[]; };
-  sdm = derive2 { name="sdm"; version="1.0-41"; sha256="083agia8091k0c44alrpxm9qqz74f1i9xycaxkfj7f626p8f6qjj"; depends=[raster sp]; };
   sdmpredictors = derive2 { name="sdmpredictors"; version="0.2.6"; sha256="1kbgv5x5ilzccafl20x86fi9f7jqxnccvb8k7dy8q41s9n36qwfs"; depends=[R_utils raster rgdal]; };
   sdmvspecies = derive2 { name="sdmvspecies"; version="0.3.2"; sha256="19avkag13ij1k65vqhmvcy8j50j8vrgw4mjc49x8i63w3d4z1wxh"; depends=[psych raster]; };
   sdnet = derive2 { name="sdnet"; version="2.3.8"; sha256="10c962wbzgl2zpz7yx5kpryldbbq76qrd5pnz4rlmbaa9kfg08s5"; depends=[]; };
+  sdols = derive2 { name="sdols"; version="1.4"; sha256="1wamzpw8q55a5zkvk21c3hilr97lxz1yq3b0dcfgcdvcqap2i14w"; depends=[commonsMath rscala]; };
   sdprisk = derive2 { name="sdprisk"; version="1.1-5"; sha256="1c6mipq8sh8347i7m7dh47f69fr21xkrsk8yjgsdvcy41h8zijmf"; depends=[numDeriv PolynomF rootSolve]; };
   sdpt3r = derive2 { name="sdpt3r"; version="0.1"; sha256="06mw1h6c8gkhi3vhal17h7px3bb277xz15k2ryqjwc7agzwhmv8c"; depends=[Matrix]; };
   sdtoolkit = derive2 { name="sdtoolkit"; version="2.33-1"; sha256="0pirgzcn8b87hjb35bmg082qp14idc5pfvm6dikpgkswag23hwh8"; depends=[]; };
   sdwd = derive2 { name="sdwd"; version="1.0.2"; sha256="0l0w4jn2p9b7acp8gmlv4w8n662l397kbrm4glslik0vnmjv151w"; depends=[Matrix]; };
-  seacarb = derive2 { name="seacarb"; version="3.2.2"; sha256="1y2mkkxc8135h2i0jbc46gs4bgj1nvnmw2si1h14npp4z3wa2qml"; depends=[gsw oce]; };
+  seaaroundus = derive2 { name="seaaroundus"; version="1.2.0"; sha256="09nyypzylb0y04ssd9ak2cw8wpy6a3nmabg9p7jrc8qz54wl6z4q"; depends=[crul ggplot2 jsonlite maps rgdal scales sp wicket]; };
+  seacarb = derive2 { name="seacarb"; version="3.2.4"; sha256="06r4grcdvm252nnln03pzqll9xqx1r3piaaxi81vfzs4w6gq1c94"; depends=[gsw oce]; };
   sealasso = derive2 { name="sealasso"; version="0.1-2"; sha256="0cjy3fj170p5wa41c2hwscmhqxwkjq22vhg9kbajnq7df2s20jcp"; depends=[lars]; };
-  searchConsoleR = derive2 { name="searchConsoleR"; version="0.2.1"; sha256="1hf87x3jfwl12d1gspnrgpzh90hpci5gh54hasi6bx6z8xw44ssb"; depends=[googleAuthR stringr]; };
+  searchConsoleR = derive2 { name="searchConsoleR"; version="0.3.0"; sha256="1z8bdlxq2sk8bcg164wy0yrmsx0inf0aj5ya2pybvadss8wr0qlr"; depends=[googleAuthR stringr]; };
   searchable = derive2 { name="searchable"; version="0.3.3.1"; sha256="0xc87i2q42j7dviv9nj4hkgjvpfiprkkjpgzwsy47vp7q8024dv0"; depends=[magrittr stringi]; };
+  searcher = derive2 { name="searcher"; version="0.0.2"; sha256="0lj7zyqldr8m7ky20frzaxmf9by2h3p89ibwsa7dyrf378swkwwj"; depends=[]; };
   seas = derive2 { name="seas"; version="0.4-3"; sha256="1n0acg6fvaym4nx1ihw0vmb79csds0k4x9427qmcyxbl9hxxmllp"; depends=[]; };
   season = derive2 { name="season"; version="0.3-5"; sha256="08f382kq51r5g9p5hsnjf17dwivhx1vfgmmwp1vzmbqx1drlqkzx"; depends=[coda ggplot2 MASS mgcv survival]; };
   seasonal = derive2 { name="seasonal"; version="1.6.1"; sha256="1nvavn84f2zb0f6n352br52wcrcmnxv6vprzcpymrnzik7pyp8y6"; depends=[x13binary]; };
   seasonalview = derive2 { name="seasonalview"; version="0.3"; sha256="1l705yc7ssldsfckbgnvd95sh3zzhpkmf1rr6ar2s60s3wsyly4n"; depends=[dygraphs htmlwidgets openxlsx seasonal shiny shinydashboard xtable xts zoo]; };
   seawaveQ = derive2 { name="seawaveQ"; version="1.0.0"; sha256="19vm1f0qkmkkbnfy1hkqnfz6x2a7g9902ka76bhpcscynl69iy56"; depends=[lubridate NADA survival]; };
-  secr = derive2 { name="secr"; version="3.1.0"; sha256="0g2fmfbxf69jy2r8adw0hpwhb3a3s9ya9vzjw91l84rid50l4900"; depends=[abind MASS mgcv nlme raster sp]; };
-  secrdesign = derive2 { name="secrdesign"; version="2.5.2"; sha256="0c2lgmc4gcjys9q130p30sj1r0k6xa4g8wsm6nj53fhlp1yb2xfl"; depends=[abind secr]; };
+  secr = derive2 { name="secr"; version="3.1.3"; sha256="0py8qk141q0h8pkw40w3l4pjhwpn8pa8k2s8qgligvnnmyzp7z00"; depends=[abind MASS mgcv nlme raster sp stringr]; };
+  secrdesign = derive2 { name="secrdesign"; version="2.5.4"; sha256="1kbqgdjpyns11ag16rgw9n6mvmjgdypk9lv3yzwf4kynds46wbbk"; depends=[abind secr]; };
   secret = derive2 { name="secret"; version="1.0.0"; sha256="09b28f7ndc167bbanbdydralykq718fixnrgs5xr9d3fbdhz1vdl"; depends=[assertthat curl jsonlite openssl rprojroot]; };
-  secrlinear = derive2 { name="secrlinear"; version="1.1.0"; sha256="0crzpsm8c42v8r0xf9rnrxcinjh22sywgv7cc3pq5s5l2526d5dj"; depends=[igraph maptools MASS rgdal secr sp]; };
+  secrlinear = derive2 { name="secrlinear"; version="1.1.1"; sha256="0jcvraypkss1gphh4cjb0b4v9460fj4dw80yd057ah11p9942ggs"; depends=[igraph maptools MASS rgdal secr sp]; };
   secure = derive2 { name="secure"; version="0.5"; sha256="16pv5m7rrcs8hcjj3kylq7smyzf2qk8rkg9m1b421w0ac7lg04x1"; depends=[MASS Rcpp RcppArmadillo]; };
   securitytxt = derive2 { name="securitytxt"; version="0.1.0"; sha256="117xmhclv219ci8vki8ni8yqvlnwgj0pd8n0r752wd8333y130wr"; depends=[Rcpp]; };
   seeclickfixr = derive2 { name="seeclickfixr"; version="1.1.0"; sha256="1agsqq2msrqrssffc6liyjjs6nqm90xy2inlcjbkdac5dhinjc4n"; depends=[jsonlite RCurl]; };
@@ -10399,7 +10605,7 @@ in with self; {
   seewave = derive2 { name="seewave"; version="2.0.5"; sha256="1ml0jcqb6i6v0xgarvzg51rgax6lsf6y2255jq1kfz4v8n39vnh0"; depends=[tuneR]; };
   seg = derive2 { name="seg"; version="0.5-1"; sha256="0gsdbq7b5wpknhlilrw771japr63snvx4vpirvzph4fjyby1c7rg"; depends=[sp splancs]; };
   segmag = derive2 { name="segmag"; version="1.2.4"; sha256="1i717xg1z7s35pkwzywgjf9wx7zj9xksv0k87h7p1q62y073qbqm"; depends=[plyr Rcpp]; };
-  segmented = derive2 { name="segmented"; version="0.5-2.2"; sha256="1wdjxkgqjqw5q2nywmgkf6y21lb0alhvaqg0m0dr2xyxf1ii79rs"; depends=[]; };
+  segmented = derive2 { name="segmented"; version="0.5-3.0"; sha256="0nrik5fyq59hwiwjcpbi4p5yfavgfjq6wyrynhkrbm4k6v1g1wlq"; depends=[]; };
   seismic = derive2 { name="seismic"; version="1.0"; sha256="02d11c3filzghi8cvryikaidmk40d4z3qxsqs7bjdhxyf814caw8"; depends=[]; };
   seismicRoll = derive2 { name="seismicRoll"; version="1.1.2"; sha256="183lx9lgmi06lv1l4gbmlmblfgjzhph4aavdnxrykpp6122hsq61"; depends=[Rcpp]; };
   sejmRP = derive2 { name="sejmRP"; version="1.3.4"; sha256="1j3sadbp12fip3n96s0hx1sg4kzwx8z01p1c905kv8gffhkz9bh0"; depends=[cluster DBI dplyr factoextra RPostgreSQL rvest stringi tidyr XML xml2]; };
@@ -10421,14 +10627,15 @@ in with self; {
   semdiag = derive2 { name="semdiag"; version="0.1.2"; sha256="0kjcflw7dn907zx6790w7hnf5db6bf549whfsc0c2r173kf13irp"; depends=[sem]; };
   semds = derive2 { name="semds"; version="0.9-2"; sha256="0ig8b7ii1c8av0il904b71lzr8lqdiibwf16yj5dp8n4xc80bryh"; depends=[minpack_lm pracma]; };
   semiArtificial = derive2 { name="semiArtificial"; version="2.2.5"; sha256="1m8kwjhqjpqjzz22caiwpb4nb70d8y0ssf9j4rfyyh530x2q2k1m"; depends=[cluster CORElearn flexclust fpc ks logspline MASS mcclust nnet robustbase RSNNS StatMatch timeDate]; };
+  seminr = derive2 { name="seminr"; version="0.4.0"; sha256="1vgmakj94s0l400wmk31hq8xl75dnhpbmdn85px6lsm1jhp6l8i5"; depends=[]; };
   semisupKernelPCA = derive2 { name="semisupKernelPCA"; version="0.1.5"; sha256="1v8wdq63b1gqicj8c9a24k0w7cc0bkg0mnc9z5mklsfcl7g0g6k9"; depends=[datautils irlba]; };
   semsfa = derive2 { name="semsfa"; version="1.0"; sha256="1x227rigjk9glq5x9lp6xxcf3y9i73rv3mrj7lkr2ycnsx8zz57h"; depends=[doParallel foreach iterators mgcv moments np]; };
-  semtree = derive2 { name="semtree"; version="0.9.10"; sha256="1xx86pqzilxpd6zki7zd846vf13dcphn9d478hjjn2zlvzlxhfkz"; depends=[bitops digest OpenMx rpart rpart_plot sets]; };
+  semtree = derive2 { name="semtree"; version="0.9.12"; sha256="07i82f3bnn9x7gy8gsjyd99mzcq9pk3xqb3479d338vpky2afv43"; depends=[bitops cluster digest OpenMx plotrix rpart rpart_plot sets]; };
   semver = derive2 { name="semver"; version="0.2.0"; sha256="10wpkyms2cix3bsin2q0qhkbl445pwwpa5gm2s4jjw1989namkxy"; depends=[assertthat Rcpp]; };
   sendmailR = derive2 { name="sendmailR"; version="1.2-1"; sha256="0z7ipywnzgkhfvl4zb2fjwl1xq7b5wib296vn9c9qgbndj6b1zh4"; depends=[base64enc]; };
   sendplot = derive2 { name="sendplot"; version="4.0.0"; sha256="0ia2xck94nwirwxi38nv0viz5wb8291yiak6f0wgwh84irsrfp1h"; depends=[rtiff]; };
   sensR = derive2 { name="sensR"; version="1.5-0"; sha256="01rs0kiv73rqrlgzwf7hnprb029i5sq1h1qjb9q3879jxj4823pf"; depends=[MASS multcomp numDeriv]; };
-  sensiPhy = derive2 { name="sensiPhy"; version="0.7.0"; sha256="18sps4nqr38bc2bsy8zq6yq45asd3s88daal7j2lz2ca6wxn5hgp"; depends=[ape caper ggplot2 phylolm phytools]; };
+  sensiPhy = derive2 { name="sensiPhy"; version="0.8.1"; sha256="0pqwxs36g31qvy8ygx5grsx782magwsmh3v2qkv3rn2ycwy3brgp"; depends=[ape caper geiger ggplot2 phylolm phytools]; };
   sensitivity = derive2 { name="sensitivity"; version="1.15.0"; sha256="02vqs1pqzivxpg2ql3wi0530cshdkz7hxvablpd1dzhvjnindknm"; depends=[boot]; };
   sensitivity2x2xk = derive2 { name="sensitivity2x2xk"; version="1.01"; sha256="1r829k939zzmi0j4chdaniajchcflmmjrl3a9hwnkg0wkfnjbvdl"; depends=[BiasedUrn mvtnorm]; };
   sensitivityPStrat = derive2 { name="sensitivityPStrat"; version="1.0-6"; sha256="0rfzvkpz7dll3173gll6np65dyb40zms63fkvaiwn0lk4aryinlh"; depends=[survival]; };
@@ -10439,16 +10646,16 @@ in with self; {
   sensors4plumes = derive2 { name="sensors4plumes"; version="0.9"; sha256="1fyf020bl6p9wdvnsfkmdlllhdwj3l4h9h2paq9dwd7hsr7av48p"; depends=[automap conf_design emdist FNN genalg gstat lattice raster rgdal sp]; };
   sensory = derive2 { name="sensory"; version="1.1"; sha256="1zd0ajrymxi6gygcq9fqgwgy0g6c3cqz53x0k5m0ihbmh11rc7s7"; depends=[gtools MASS Matrix]; };
   senstrat = derive2 { name="senstrat"; version="1.0.3"; sha256="0j6mb55v5ivqvk8nn8fjlzrbdgj6csa58yc6gy1g07m7gk2qz2np"; depends=[BiasedUrn MASS]; };
-  sentimentr = derive2 { name="sentimentr"; version="2.0.1"; sha256="09sjd1fyls6yzb7sd6sz0cr9qjzyxgssnsb3b3wrvm5k4mgpsvlw"; depends=[data_table ggplot2 lexicon stringi syuzhet textclean textshape]; };
+  sentimentr = derive2 { name="sentimentr"; version="2.2.3"; sha256="0f9hwiyja9cgig0ja9miqzsfwpn25bfa8xrwfm34v1n2l3v2gbxv"; depends=[data_table ggplot2 lexicon stringi syuzhet textclean textshape]; };
   sentometrics = derive2 { name="sentometrics"; version="0.2"; sha256="0pndbas1xya2pnriil94r0pp6zjd44flhsqimdgmi7w5k87wlabf"; depends=[abind caret data_table foreach ggplot2 ggthemes glmnet ISOweek MCS quanteda Rcpp RcppArmadillo RcppRoll sentimentr stringi zoo]; };
+  seoR = derive2 { name="seoR"; version="0.1.0"; sha256="0aa74a9vi176ap4ap44sjm8lm3025dss067sm5lgc4b73a6ph75p"; depends=[digest dplyr httr igraph jsonlite RCurl readr robotstxt rvest stringr XML xml2]; };
   separationplot = derive2 { name="separationplot"; version="1.1"; sha256="0qfkrk8n6jj8l7ywngwsaikfwmd9hbrpr43x0l9wkjjp1asgs5l6"; depends=[]; };
-  seplyr = derive2 { name="seplyr"; version="0.5.0"; sha256="0883lfkkqxdli6caz2i757sdflpjbdmpb683ykpfrw5yn8cclbns"; depends=[dplyr rlang wrapr]; };
+  seplyr = derive2 { name="seplyr"; version="0.5.3"; sha256="0xk3pqirgz49y94nk5karb939xbg7zxfalm1pkaj603arpi8y6am"; depends=[DBI dbplyr dplyr rlang RSQLite wrapr]; };
   seqCBS = derive2 { name="seqCBS"; version="1.2"; sha256="1kywi3kvvl9y6nm7cwf6fj8gz9gzznp5va336g1akzgy77k82d8v"; depends=[clue]; };
   seqDesign = derive2 { name="seqDesign"; version="1.1"; sha256="1694swd8ik9fbiflmnw4xpq82kq18rqzkw0dv5pvq30c47xjgamv"; depends=[survival xtable]; };
   seqHMM = derive2 { name="seqHMM"; version="1.0.8"; sha256="1zr70ym32isav13wsb7zv4gv3bn04qi0dn5k0fqjbdcw36m5hfi8"; depends=[gridBase igraph Matrix nloptr numDeriv Rcpp RcppArmadillo TraMineR]; };
   seqICP = derive2 { name="seqICP"; version="1.1"; sha256="1dfhl7g47icjw38p9c0hyvnn3pwzw7pndywk22vgcyfhiz23xjcp"; depends=[dHSIC mgcv]; };
   seqMeta = derive2 { name="seqMeta"; version="1.6.7"; sha256="11dscdrlnk5jzg0q2g59qis4xjr4xs86bi463jmhq53n9gsb4i1l"; depends=[CompQuadForm coxme Matrix survival]; };
-  seqPERM = derive2 { name="seqPERM"; version="1.0"; sha256="1i8ai4gxybh08wxjh96m6xlqxhh7ch0xihjs879snmy4zqfi0pap"; depends=[]; };
   seqRFLP = derive2 { name="seqRFLP"; version="1.0.1"; sha256="1i98hm8wgwr8b6hd237y2i9i0xgn35w4n2rxy4lqc5zq71gkwkvk"; depends=[]; };
   seqinr = derive2 { name="seqinr"; version="3.4-5"; sha256="17zv0n5cji17izwmwg0jcbxbjl3w5rls91w15svcnlpxjms38ahn"; depends=[ade4 segmented]; };
   seqminer = derive2 { name="seqminer"; version="6.0"; sha256="057j1l6dip35l1aivilapl2zv9db677b3di2pb3sfgq2sxg0ps3l"; depends=[]; };
@@ -10459,43 +10666,43 @@ in with self; {
   sequoia = derive2 { name="sequoia"; version="0.9.3"; sha256="1lxq88bw5fbm2afdh79fs363dvb1c2jsz02dc6c0ndwkwch04igc"; depends=[plyr]; };
   sergeant = derive2 { name="sergeant"; version="0.5.2"; sha256="02chkyvmwd4nimw62v82rfbid1xqw5b1335na44pdi675g904250"; depends=[DBI dbplyr dplyr htmltools httr jsonlite purrr readr scales]; };
   serial = derive2 { name="serial"; version="1.3"; sha256="1ibwd8xmkd0pwdhivm6h3yd3rsi28mai5n7qcs1bq2mx8hb5lg7f"; depends=[]; };
-  seriation = derive2 { name="seriation"; version="1.2-2"; sha256="1b6glraxi5zrqzihnh39bbdnzsbd925r9hjpi020d470266g2c8f"; depends=[cluster colorspace dendextend gclus gplots MASS qap registry TSP]; };
+  seriation = derive2 { name="seriation"; version="1.2-3"; sha256="1q6hw4hjw224b4y0dc0j630v2pgj6sn455nwkilb70w8k31hpk92"; depends=[cluster colorspace dendextend gclus gplots MASS qap registry TSP]; };
   seroincidence = derive2 { name="seroincidence"; version="1.0.5"; sha256="07lphrp7r3i87633q8g6svk2mxbsvq4blrf8gnm0p99hkmz8wgg9"; depends=[]; };
+  serrsBayes = derive2 { name="serrsBayes"; version="0.3-12"; sha256="137pm5s7w6fxaalyc7hzvdkg7rayjhqw2dnb2q8q9ijp0v9wx7mr"; depends=[MASS Matrix Rcpp RcppEigen truncnorm]; };
   servr = derive2 { name="servr"; version="0.8"; sha256="05pz4ychqp4cqywcdavdi8jj3y09gmam097d2idjnlcg9x61h2s9"; depends=[httpuv jsonlite mime]; };
   sesem = derive2 { name="sesem"; version="1.0.2"; sha256="0b1xzv38wpkhhlq87xrvlh45b8ksbi8bg4ar5hrf8gxa19r9rmi5"; depends=[gplots lavaan mgcv]; };
   session = derive2 { name="session"; version="1.0.3"; sha256="04mcy1ac75fd33bg70c47nxqxrmqh665m9r8b1zsz5jij1sbl8q5"; depends=[]; };
   sessioninfo = derive2 { name="sessioninfo"; version="1.0.0"; sha256="00g3lbvk1cjjzckl70fn5n3579qb301im4lbm3cip5c2v8k283dk"; depends=[clisymbols withr]; };
   setRNG = derive2 { name="setRNG"; version="2013.9-1"; sha256="02198cikj769yc32v8m2qrv5c01l2fxmx61l77m5ysm0hab3j6hs"; depends=[]; };
-  sets = derive2 { name="sets"; version="1.0-17"; sha256="1ib7wyzrdadxz7d29prr0k0dpx8yqgj9b1rnjn6lankjdlw7m08p"; depends=[]; };
+  sets = derive2 { name="sets"; version="1.0-18"; sha256="16v7650p47khqrbbw0z98llmwmmhswqmhri0n7nrfhdqwmby1lbl"; depends=[]; };
   setter = derive2 { name="setter"; version="0.0-1"; sha256="10fwrx8yysp99rrkbnn3rbz79vyzr2h3p7zxxlqapw1k2lllp0r5"; depends=[assertive_base]; };
   settings = derive2 { name="settings"; version="0.2.4"; sha256="092sv6nccm6p2d695l9w0zfi2xgymk12c8p8lhl9nb86mxrb3nry"; depends=[]; };
   severity = derive2 { name="severity"; version="2.0"; sha256="1mp19y2pn7nl9m8xfljc515kk5dirv0r2kypazpmd956lcivziqq"; depends=[]; };
-  sf = derive2 { name="sf"; version="0.5-5"; sha256="0a92qvz5s0n31v0cq4zjbxp59l6qw3k5w97y08iridj3hbwk3bc2"; depends=[classInt DBI magrittr Rcpp units]; };
+  sf = derive2 { name="sf"; version="0.6-0"; sha256="0g6ghmjpxvlpi2sgvcxb6dx74pl7nc70cr8lgslrnv0fhnjr49jk"; depends=[classInt DBI magrittr pillar Rcpp units]; };
   sfa = derive2 { name="sfa"; version="1.0-1"; sha256="1acqxgydf8j5csdkx0yf169x3yaa31r0ccdrqarh6vj1hacm89ad"; depends=[]; };
   sfadv = derive2 { name="sfadv"; version="1.0.1"; sha256="1rfpm6km5pckwhqgpvidm6qsj5sjdaqqj5b0sgvpslivfa4c80cr"; depends=[gmm minpack_lm]; };
   sfc = derive2 { name="sfc"; version="0.1.0"; sha256="0cm4mfcfd9bhf2j5fppsihzrfipnldb6q3xradd88z9pwgrkfx2a"; depends=[dplyr sna tidyr triangle zoo]; };
-  sfdct = derive2 { name="sfdct"; version="0.0.4"; sha256="0q392wgdlv2fdksk2rwqjqddxrzgkr3pg1czzqywr3l07pl7gxbj"; depends=[dplyr RTriangle sf sp tibble]; };
+  sfdct = derive2 { name="sfdct"; version="0.0.5"; sha256="02di504pcv423wk40ap8k18b2q759x8f5wsp8kkbwks54j42s69a"; depends=[dplyr RTriangle sf sp tibble]; };
   sfinx = derive2 { name="sfinx"; version="1.7.99"; sha256="14v47y00qwvc2s0vzjw19hwn85nzj8lna539c75qq6zkn6kir6va"; depends=[]; };
   sfsmisc = derive2 { name="sfsmisc"; version="1.1-1"; sha256="0jzmbywlyzfxs7hlmyd0iynghfc9qp5sa5lnhr73y8r360yv1ahf"; depends=[]; };
-  sft = derive2 { name="sft"; version="2.0-7"; sha256="1fq1b32f08i4k9bv4hh7rhk1jj7kgans6dwh1bmawaqkchyab3jr"; depends=[fda]; };
+  sft = derive2 { name="sft"; version="2.2-0"; sha256="0d1yiimc899i09yyrv1x40ixqss87xjpy08ab16h9faxd4bsk3y2"; depends=[fda SuppDists]; };
   sgPLS = derive2 { name="sgPLS"; version="1.7"; sha256="1jk2j1zn5vq82rcjflnk7g6y2q0v5jl14k804dmigqg013gbykql"; depends=[mixOmics mvtnorm]; };
   sgRSEA = derive2 { name="sgRSEA"; version="0.1"; sha256="0vyypnq81l36x0j44q2l9wbf3x4krz4fzypi7vyqhaq97mkzaw5j"; depends=[]; };
-  sgd = derive2 { name="sgd"; version="1.1"; sha256="1kqpaxyacaq1fkmy4hsj62167gcmqng4pmafpdjdpqxwdqxz9xxf"; depends=[BH bigmemory ggplot2 MASS Rcpp RcppArmadillo]; };
-  sgee = derive2 { name="sgee"; version="0.5-0"; sha256="040llsmgwdvq8qr02zh4vnpvyqs8zsbla4qrdrjpcmv9ja52ppb9"; depends=[copula mvtnorm]; };
+  sgee = derive2 { name="sgee"; version="0.6-0"; sha256="055iydainzywb1s5id5rl9i94dj5arr9b6qz15p8wps49vm2mlp3"; depends=[copula mvtnorm]; };
   sgeostat = derive2 { name="sgeostat"; version="1.0-27"; sha256="1iq9p2jk8bpv1h853a1l91d5c5dxnhkk3cmkd01siqqvj04hv4vb"; depends=[]; };
   sglOptim = derive2 { name="sglOptim"; version="1.3.6"; sha256="0gzhzfi5q9hgqgzagfdzi4cswpmwic9ggf72qi6axl1hixgmgp0w"; depends=[BH doParallel foreach Matrix Rcpp RcppArmadillo RcppProgress]; };
   sglasso = derive2 { name="sglasso"; version="1.2.2"; sha256="1yk9wvg98a2l9kdaksy75av9z9iz27v5d2zpsqhabqwkwfh6wkad"; depends=[igraph Matrix]; };
-  sglg = derive2 { name="sglg"; version="0.1.1"; sha256="110w4n3imx9ar9g57ckbbb6hm5sqyg2syh7g2d4nyzijh2pmcyd4"; depends=[Formula robustloggamma ssym survival]; };
+  sglg = derive2 { name="sglg"; version="0.1.2"; sha256="0wqjw466j3j5ipjgp18978g7fwb2fvzxhfv2bp4dqdazmxrjyyqm"; depends=[Formula robustloggamma ssym survival]; };
   sglr = derive2 { name="sglr"; version="0.7"; sha256="11gjbvq51xq7xbmpziyzwqfzf4avyxj2wpiz0kp4vfdj3v7p4fp9"; depends=[ggplot2 shiny]; };
   sgmcmc = derive2 { name="sgmcmc"; version="0.2.0"; sha256="1jqk6bic8g5zsdxa9f6w6j6ha6dnghfdi61cyy9vi94xsmkbkv66"; depends=[tensorflow]; };
   sgof = derive2 { name="sgof"; version="2.3"; sha256="12bpyvg5df1m2ar6frpi10zlj3dk9h61r13rzn3w5a3nyk8gljsg"; depends=[poibin]; };
   sgr = derive2 { name="sgr"; version="1.3"; sha256="0zxmrbv3fyb686hcgfy2w1w2jffxf41ab8yc90dsgf931s9c55wn"; depends=[MASS]; };
   sgt = derive2 { name="sgt"; version="2.0"; sha256="0qb3maj5idwafs40fpdfrwzkadnh5yg8fvfzfs51p9yy69kbmlkx"; depends=[numDeriv optimx]; };
-  shades = derive2 { name="shades"; version="0.2.0"; sha256="1r2xbz1h144pg53g3ayy7n08091gv5zj52p02gv7kihir2kzxj0w"; depends=[]; };
-  shadow = derive2 { name="shadow"; version="0.4.0"; sha256="14alr3sn4w8r2cqf22k6kqr84yj5vjmjm4cw4rz9zzx9s5182i51"; depends=[raster rgeos sp]; };
+  shades = derive2 { name="shades"; version="1.1.0"; sha256="0ajdpwisfax96mc3w1akjlkk36b6gni1aprxqvqlwlw8bmgsmj4p"; depends=[]; };
+  shadow = derive2 { name="shadow"; version="0.4.5"; sha256="00g82dwzmawb6v7x9sphs7vmmpjmzb4mvhw76x96wnasskqlrcpc"; depends=[raster rgeos sp]; };
   shadowtext = derive2 { name="shadowtext"; version="0.0.2"; sha256="17ccylxnl6837cf81fwkgywjmqizmcm6mhqak10sl5apnqm5n1nl"; depends=[ggplot2]; };
   shallot = derive2 { name="shallot"; version="0.4.3"; sha256="1rxx15qma6sbi4h2iv90ym4r22lwh64z495psrxv624w1zjypbvf"; depends=[commonsMath rscala]; };
-  shape = derive2 { name="shape"; version="1.4.3"; sha256="1v9xp60p813rnx41vchkh32qmcb4z2zp9l7r1a8a6f8aqylnq3vj"; depends=[]; };
+  shape = derive2 { name="shape"; version="1.4.4"; sha256="0hadk3mapkhbh8xjkiz52vxdagmmgvm15xwpzb90ikw4giyipjzl"; depends=[]; };
   shapeR = derive2 { name="shapeR"; version="0.1-5"; sha256="17fq4gsdvyniq7n4x1xdvb5kk50184i7why3pdf1djjhknym087j"; depends=[gplots jpeg MASS pixmap vegan wavethresh]; };
   shapefiles = derive2 { name="shapefiles"; version="0.7"; sha256="08ghndihs45kylbzd9wnxffn8ixvxjhjnjldjyd526ai2sj8xcgf"; depends=[foreign]; };
   shapes = derive2 { name="shapes"; version="1.2.3"; sha256="1fzwpqa0paql4n652diqsqylz5r5crblfip6g6c0vszrvy7avi4q"; depends=[MASS rgl scatterplot3d]; };
@@ -10505,6 +10712,7 @@ in with self; {
   sharx = derive2 { name="sharx"; version="1.0-5"; sha256="10sfjg6946jfk4051da0w1v89503av40wckqaabr12syf8kn0aw8"; depends=[dclone dcmle Formula]; };
   shazam = derive2 { name="shazam"; version="0.1.8"; sha256="0j953zf0wigr645a52088ajrchhr7xlf891hybbx8pvspj240f3y"; depends=[alakazam ape diptest doParallel dplyr foreach ggplot2 igraph iterators kedd KernSmooth lazyeval MASS progress scales SDMTools seqinr stringi tidyr]; };
   shelltrace = derive2 { name="shelltrace"; version="3.5.1"; sha256="1xgbavaa26185i6q3907ds3bzq4xrw027x1sw5vsybqrxdz04jiz"; depends=[bmp tiff xlsx]; };
+  shiftR = derive2 { name="shiftR"; version="1.2"; sha256="02aa7lpw050rraiajlmyzhmnrz0m3nlc9j5y4rw0k2whglk23j2j"; depends=[]; };
   shiny = derive2 { name="shiny"; version="1.0.5"; sha256="0hps6nlyffh685smsm9sd0rdmip0y8v7hgv6a4hqlq7kf8zmzqi0"; depends=[digest htmltools httpuv jsonlite mime R6 sourcetools xtable]; };
   shiny_semantic = derive2 { name="shiny.semantic"; version="0.1.1"; sha256="0jd00z817cccz3wfhcmz61wsy5fjw6yyan2ywkf06xqcdpnr8iwh"; depends=[htmltools htmlwidgets purrr shiny]; };
   shinyAce = derive2 { name="shinyAce"; version="0.2.1"; sha256="0ycka8rsw0178q9klfid97vdn5cbyx3r778nis5s3dqipdyazdm9"; depends=[shiny]; };
@@ -10513,27 +10721,29 @@ in with self; {
   shinyFeedback = derive2 { name="shinyFeedback"; version="0.0.3"; sha256="1ikxwa02jpkir1xxx4lvz995ggx8032vl0zknmhccb2mn1k98b4i"; depends=[digest shiny]; };
   shinyFiles = derive2 { name="shinyFiles"; version="0.6.2"; sha256="1lphzqbzg482lv0xiamfv28n5nyjppss9zzcpx1cd5fsz0xg1282"; depends=[htmltools RJSONIO shiny]; };
   shinyHeatmaply = derive2 { name="shinyHeatmaply"; version="0.1.0"; sha256="1vl80vp7yslnh0dvcrpysfn5rndjavphy31y15546q7ax7d0fn6v"; depends=[dplyr DT heatmaply htmltools htmlwidgets jsonlite plotly RColorBrewer readxl shiny viridis xtable]; };
-  shinyKGode = derive2 { name="shinyKGode"; version="1.0.1"; sha256="0454j8dpihnw7hiq9bfss2g6pifa678m7gzgh082b09sjgpfh1mr"; depends=[ggplot2 gridExtra KGode mvtnorm pracma pspline reshape2 shiny shinyjs XML]; };
+  shinyKGode = derive2 { name="shinyKGode"; version="1.0.5"; sha256="004zwz4kqfijzvvwkq8v1gi25w1wrdlg8230g93w36gbi6cl2vk1"; depends=[ggplot2 gridExtra KGode mvtnorm pracma pspline reshape2 shiny shinyjs XML]; };
   shinyLP = derive2 { name="shinyLP"; version="1.1.0"; sha256="08vc35988pv0kx0kvdl26nkdzcgmi6w4xffmyylan7x59519imkk"; depends=[shiny shinyBS shinythemes]; };
   shinyRGL = derive2 { name="shinyRGL"; version="0.1.0"; sha256="07llg1yg5vmsp89jk60ly695zvxky6n06ar77mjxzlyc294akwmy"; depends=[rgl shiny]; };
   shinyShortcut = derive2 { name="shinyShortcut"; version="0.1.0"; sha256="101wz9s4rk7fbaqgm0r2v3v8za20vdxwq4vhkz8xr7y5pr65sxiq"; depends=[]; };
   shinyTime = derive2 { name="shinyTime"; version="0.2.1"; sha256="0gpa6kypchvvlq71nnlilciclcrhaa488prjz46sddrsxjy09mp7"; depends=[htmltools shiny]; };
   shinyTree = derive2 { name="shinyTree"; version="0.2.2"; sha256="08n2s6pppbxn23ijp6vms609p4qwlmfh9g0k5hdfqsqxjrz1nndi"; depends=[shiny]; };
-  shinyWidgets = derive2 { name="shinyWidgets"; version="0.4.0"; sha256="0nicn4vjqxfbf8s6kq6xxfjh041n5ssl3cwbllylcvwvy16qxzpw"; depends=[htmltools jsonlite shiny]; };
+  shinyWidgets = derive2 { name="shinyWidgets"; version="0.4.1"; sha256="11qwwz4il4n8ha587bc32n1z5pnhw4vv2ffxl9cc1i431k01p7yc"; depends=[htmltools jsonlite shiny]; };
   shinyaframe = derive2 { name="shinyaframe"; version="1.0.1"; sha256="1flhgsm4q7p5acb41v73pf8ni92y9dwdppxjb9czlz1sxwf03p1s"; depends=[htmltools htmlwidgets shiny]; };
+  shinyalert = derive2 { name="shinyalert"; version="1.0"; sha256="0ngmpbzw6fw1gs6sv9m3xv2c9bmrxg0bs6lnvxn8hm8cwr4440xi"; depends=[digest shiny]; };
   shinybootstrap2 = derive2 { name="shinybootstrap2"; version="0.2.1"; sha256="17634l3swlvgj1sv56nvrpgd6rqv7y7qjq0gygljbrgpwmfj198c"; depends=[htmltools jsonlite shiny]; };
   shinycssloaders = derive2 { name="shinycssloaders"; version="0.2.0"; sha256="1bpzsm7m7c366sjl1qndp4m5dg2vlm68rjgdy9n1ija9xbp0r2g4"; depends=[digest glue shiny]; };
   shinydashboard = derive2 { name="shinydashboard"; version="0.6.1"; sha256="14zi7g5wrngy6lwi9xpvaid7727m6rfdijbb89al9likfhjqzqqy"; depends=[htmltools shiny]; };
   shinyjqui = derive2 { name="shinyjqui"; version="0.2.0"; sha256="07ijd5psywlkfrz54d4q68bwij1as4ai0360fya8ikngkwg393mj"; depends=[htmlwidgets jsonlite shiny]; };
-  shinyjs = derive2 { name="shinyjs"; version="0.9.1"; sha256="0h90k4f93lbfraldjxlbhjyjr54c3hiv7gyrbqz70j08s0bhyama"; depends=[digest htmltools jsonlite miniUI shiny]; };
-  shinymaterial = derive2 { name="shinymaterial"; version="0.4.1"; sha256="1p0493agnhnqgkf7ln4m5d5gqz4aazmcxsbnwarr5nh4si5q5pvl"; depends=[shiny]; };
+  shinyjs = derive2 { name="shinyjs"; version="1.0"; sha256="113zpijri0l80rlgrvqn6bxk0sdqgl79h7yhja2p76f9dc9i2sr8"; depends=[digest htmltools jsonlite shiny]; };
+  shinymaterial = derive2 { name="shinymaterial"; version="0.5.1"; sha256="1bk4n2zzhiziwfqzpl3b9ybm52mfv1z2f00kyy6d6qvpjwr9qzy2"; depends=[shiny]; };
   shinystan = derive2 { name="shinystan"; version="2.4.0"; sha256="18bdh2h6grlwfx6p00214p7cgzg7zfhbvnkd1dmxihp9wf4l80af"; depends=[bayesplot colourpicker DT dygraphs ggplot2 gridExtra gtools markdown reshape2 rsconnect rstan shiny shinyjs shinythemes threejs xtable xts]; };
   shinythemes = derive2 { name="shinythemes"; version="1.1.1"; sha256="0i220y051dq763idh1j5zhpb5cpv3jr11jd9akmry9aadyys5pz6"; depends=[shiny]; };
   shinytoastr = derive2 { name="shinytoastr"; version="2.1.1"; sha256="01j2z4gf1wxblrjayykwxdr2s8394i7k930x8g4hmrj7c9pv264n"; depends=[shiny]; };
   shock = derive2 { name="shock"; version="1.0"; sha256="11m52al591xjznl62q1waxsg5m1a1afmd0yqcc5zsjlrplykg4lp"; depends=[capushe GGMselect glasso igraph mvtnorm]; };
   shopifyr = derive2 { name="shopifyr"; version="0.28"; sha256="1ypqgiqimdwj9fjy9ykk42rnkipb4cvdxy5m9z9jklvk5a7cgrml"; depends=[R6 RCurl RJSONIO]; };
   shotGroups = derive2 { name="shotGroups"; version="0.7.3"; sha256="0h6c4fz2b4gpbfqykic6apflvp11bcafqm87gzl0zv8b03ydylxk"; depends=[boot coin CompQuadForm KernSmooth robustbase]; };
-  showtext = derive2 { name="showtext"; version="0.5"; sha256="1fn3467n3lgl55dh62y7aq5mg3paf6faxp5kp4s04bn33g87zxgx"; depends=[showtextdb sysfonts]; };
+  showimage = derive2 { name="showimage"; version="1.0.0"; sha256="1c0x3iqjdjsz3cdhc02b3qm2pwxjr1q2k87jwvxj9lnzzw81f1pl"; depends=[png]; };
+  showtext = derive2 { name="showtext"; version="0.5-1"; sha256="0zb9h6frw580cql0nbkvfb0jajq6k4yhqaifvz8cpysd32dk35wm"; depends=[showtextdb sysfonts]; };
   showtextdb = derive2 { name="showtextdb"; version="2.0"; sha256="1qwwj9x2jvadvwn60h75k99c9xi7yhqjsgaakahz5paxgj583bsh"; depends=[sysfonts]; };
   shp2graph = derive2 { name="shp2graph"; version="0-3"; sha256="0mfb3f64kpd23qa1yb19j7j234snls7yvszp2yxnv9yahk0blifw"; depends=[igraph maptools sp]; };
   shrink = derive2 { name="shrink"; version="1.2.1"; sha256="0pd967wsys8fd7gyvr9y08km118yamfk5c1a1i2k8nr2ifpqmy0w"; depends=[MASS mfp rms survival]; };
@@ -10549,14 +10759,15 @@ in with self; {
   sigQC = derive2 { name="sigQC"; version="0.1.11"; sha256="1mnvpkak37br406ixsn65g0snimf3iiql5yfbwflazw3sz5q11kz"; depends=[biclust class cluster ComplexHeatmap fmsb gplots gridGraphics KernSmooth lattice MASS moments nnet RankProd]; };
   sigclust = derive2 { name="sigclust"; version="1.1.0"; sha256="0151v7lr4n4yyn93j0s06gzc9jh9xhdgvfw6kvpfy24jl6wdii7g"; depends=[]; };
   sigloc = derive2 { name="sigloc"; version="0.0.4"; sha256="13v2dlgsbcsqqm8yxls62i7r3sk8m3c78jv8f9lgdihq5pjnd9zp"; depends=[ellipse nleqslv]; };
+  sigmaNet = derive2 { name="sigmaNet"; version="1.0.3"; sha256="0b9p5kgcbpzb83s0vgmfwmh15lvsfz5q0yk5wl16rxyiqqg2nxag"; depends=[htmlwidgets igraph jsonlite RColorBrewer]; };
   sigmoid = derive2 { name="sigmoid"; version="0.2.1"; sha256="1myphx64irwllf3p9aifmg37mg4jg58ik7f42zilg5qsjfhj37zf"; depends=[]; };
   signal = derive2 { name="signal"; version="0.7-6"; sha256="1vsxramz5qd9q9s3vlqzmfdpmwl2rhlb2n904zw6f0fg0xxjfq3b"; depends=[MASS]; };
   signalHsmm = derive2 { name="signalHsmm"; version="1.4"; sha256="1plyvx0pdid4zydxjwph6v96c8ilzgn55vcdszkslp3a4s2sns65"; depends=[Rcpp seqinr shiny]; };
   signmedian_test = derive2 { name="signmedian.test"; version="1.5.1"; sha256="05n7a4h2bibv2r64cqschzhjnm204m2lm1yrwxvx17cwdp847hkm"; depends=[]; };
   sigora = derive2 { name="sigora"; version="2.0.1"; sha256="1sgjafr2f7carwnvp0vsvp80jn2bzwlkay38ch63qk9gapsh4imh"; depends=[]; };
-  sigr = derive2 { name="sigr"; version="0.2.2"; sha256="1ijj7krszl97x0zk0bi1a77rv1lmzkp70bylgsyqcadqqh8prci3"; depends=[pwr]; };
+  sigr = derive2 { name="sigr"; version="0.2.3"; sha256="1kyj8xizswwg5agv4ac296pqvxxq3kla537z10qvg16ilskbqny5"; depends=[pwr]; };
   siland = derive2 { name="siland"; version="1.0"; sha256="0zqwslg0vak22q475azwank81wr4kfx33h21w84lsg7iihrb08nv"; depends=[lme4 raster rgdal sp]; };
-  sim1000G = derive2 { name="sim1000G"; version="1.32"; sha256="1x0dzg58wb1kzn1j3ad44v3x4lyy7vwsx1hj1klyk7dgnmhlniym"; depends=[hapsim MASS stringr]; };
+  sim1000G = derive2 { name="sim1000G"; version="1.38"; sha256="0sc5gsbcvj9vv0sysg9pg0lkh9f8w8mdxpxaf2a1h9x7c9wrx2m7"; depends=[hapsim MASS readr stringr]; };
   simEd = derive2 { name="simEd"; version="1.0.3"; sha256="1yq0qblrz0zddx682rzwdaa0k0r223i123la7wbp73spnn38g4br"; depends=[rstream]; };
   simFrame = derive2 { name="simFrame"; version="0.5.3"; sha256="154d4k6x074ib813dp42l5l8v81x9bq2c8q0p5mwm63pj0rgf5f3"; depends=[lattice Rcpp]; };
   simLife = derive2 { name="simLife"; version="0.3"; sha256="0bqhixr4zg7mwgxdsjk0h5a82dyfkhiv9xafw43w2bpnmyxywdia"; depends=[splancs unfoldr]; };
@@ -10576,10 +10787,10 @@ in with self; {
   simex = derive2 { name="simex"; version="1.7"; sha256="0dmyxhg3bk23y08xbgwlg791pcl3131im3jkh9x5pjqczfjvim0a"; depends=[]; };
   simexaft = derive2 { name="simexaft"; version="1.0.7"; sha256="13w9m35qrrp8kkz4gqp7fg9jv8fs99y19n21bdxsd3f5mlkbvqgl"; depends=[mvtnorm survival]; };
   simglm = derive2 { name="simglm"; version="0.6.0"; sha256="1kmi5lpx8m14iz0i9z8811cp6fq2x700qsxn6rxrkxbq88a5mdss"; depends=[dplyr Matrix purrr tibble tidyr]; };
-  simmer = derive2 { name="simmer"; version="3.6.4"; sha256="0x5xb1fnkyx1dyvxpwb5i2q7p1xnfcyz6dy1d7c07gvp3444dvbk"; depends=[BH codetools magrittr R6 Rcpp]; };
-  simmer_plot = derive2 { name="simmer.plot"; version="0.1.11"; sha256="1vwf9dxyg777ll6h5xcym1c0z75am9gaar1gxvli7d3vxlibpsyc"; depends=[DiagrammeR dplyr ggplot2 scales simmer tidyr]; };
+  simmer = derive2 { name="simmer"; version="3.6.5"; sha256="1vkicav2642il5php26qdji8kji0jrg42x9p5gyzy6fnih6jimnz"; depends=[BH codetools magrittr R6 Rcpp]; };
+  simmer_bricks = derive2 { name="simmer.bricks"; version="0.1.0"; sha256="1sb1ayh56sbgs4p0r3frjjfn4vcdr43xm85lvb9aqk3wmj2lddqy"; depends=[simmer]; };
+  simmer_plot = derive2 { name="simmer.plot"; version="0.1.12"; sha256="1519l3zj7jmjr8yv12ah61r6m7vyjxbnyajqdhvl388bix30dn6w"; depends=[DiagrammeR dplyr ggplot2 scales simmer tidyr]; };
   simmr = derive2 { name="simmr"; version="0.3"; sha256="18ycrd7qbz7frvd3bgbqaaapslw1jw89fy3np5qyb9sswyk08w9m"; depends=[boot coda compositions ggplot2 MASS reshape2 rjags viridis]; };
-  simone = derive2 { name="simone"; version="1.0-3"; sha256="1l38xbcf50kjh0k4dc4xsxkjr54jz4s98az99mzcsdarqd6kz9kg"; depends=[mixer]; };
   simpleCache = derive2 { name="simpleCache"; version="0.3.1"; sha256="14jrsfxcrndfgi7yl5frfsyixxkhagc7cfav8h6mf6apfxx0v1ls"; depends=[]; };
   simpleNeural = derive2 { name="simpleNeural"; version="0.1.1"; sha256="0rm6kvz1mppvgcvwsgg3nz6ci37l95ins64g0jh4rw6lfmy0grjc"; depends=[]; };
   simpleRCache = derive2 { name="simpleRCache"; version="0.3.2"; sha256="0ldmxa5rw1kcb24swnk8s471ww11jfbscynaahnnsi0zzqmhwirk"; depends=[digest]; };
@@ -10587,14 +10798,14 @@ in with self; {
   simpleboot = derive2 { name="simpleboot"; version="1.1-3"; sha256="1qprjisfflhzg8ll12p3q1zcfdiyc45glic2j9cw9nhx5rb065fk"; depends=[boot]; };
   simplegraph = derive2 { name="simplegraph"; version="1.0.0"; sha256="1gcpbljp1fgaprxnmq23izf1h2x3p5dnxlylwqsnlcj50bvm46gq"; depends=[]; };
   simplexreg = derive2 { name="simplexreg"; version="1.3"; sha256="1zkh00xbddhgz0qn0a5pj12n0hpx4f5kihpfj71x92pmxpzglcxh"; depends=[Formula plotrix]; };
-  simplr = derive2 { name="simplr"; version="0.1-1"; sha256="14gv2cwygjjfc9yjdrcn68scgyh469kypmf4mqy5p18gsxfj3h1c"; depends=[]; };
   simputation = derive2 { name="simputation"; version="0.2.2"; sha256="0bn5pq3gbsjc7sdivki98k9cb0sp5wkpm0bwi4mdnvpd7r2psb1n"; depends=[gower MASS rpart]; };
   simr = derive2 { name="simr"; version="1.0.3"; sha256="0kp1x2bxr0ck49y9pn44jr7pp3ji1cqi48dr5z600mzacx6l95xp"; depends=[binom car iterators lme4 pbkrtest plotrix plyr RLRsim stringr]; };
   simrel = derive2 { name="simrel"; version="1.0-1"; sha256="0905rjqh8c08vyg090h0i7sx89vdryignslldzfz2r5yrszl4ga8"; depends=[FrF2 sfsmisc]; };
   simsalapar = derive2 { name="simsalapar"; version="1.0-9"; sha256="0h46acf797lp1hvs8x91nzll3zxiiczfl6vdxxrwizr109jzggcj"; depends=[colorspace gridBase sfsmisc]; };
   simsem = derive2 { name="simsem"; version="0.5-13"; sha256="0v6gbfp4659gbpzc1vffg687c8bcd45ddb7jhd0bgx66m28853kk"; depends=[lavaan]; };
-  simstudy = derive2 { name="simstudy"; version="0.1.7"; sha256="17bs1j6admf897rvxx3bcrg50nfwv5fwj4y72wkczy21d856s1x4"; depends=[data_table mvnfast Rcpp]; };
+  simstudy = derive2 { name="simstudy"; version="0.1.8"; sha256="0n8wq8xw4vlpcz6qlqkza9zwd3nkbmhs8nw2gzz64q9blzcp69mw"; depends=[data_table mvnfast Rcpp]; };
   simsurv = derive2 { name="simsurv"; version="0.1.0"; sha256="08w5kbzx3wlksl17kjg9j4dj1f40ddm32mafi75y5c8bwgcfzqzy"; depends=[]; };
+  simtimer = derive2 { name="simtimer"; version="3.0.0"; sha256="0hfp652s97dz07fs92gfsaiwd6pwg95qsvr6qjwj1k5d3h6hzf8y"; depends=[]; };
   simulator = derive2 { name="simulator"; version="0.2.0"; sha256="18x0c9bf9anbykq9f46fxnnx7g36bh01s4cdmrn7mdygs6ac9c8z"; depends=[magrittr]; };
   simule = derive2 { name="simule"; version="1.2.0"; sha256="09lhd0q0xn15v0j172749rih3p2qgn3sbprhj2az9s4fm9752az3"; depends=[igraph lpSolve pcaPP]; };
   sinaplot = derive2 { name="sinaplot"; version="1.1.0"; sha256="0zfq6l8wjvdj7rndsfyh0a2xjlxmn2ij1q50hg3xjfpwrjxcsck8"; depends=[plyr]; };
@@ -10602,7 +10813,7 @@ in with self; {
   sinib = derive2 { name="sinib"; version="1.0.0"; sha256="08x2a5hn41vcsai3r36w1kgzka4ks53pkp6dxn90bsqh40ydb0db"; depends=[]; };
   siplab = derive2 { name="siplab"; version="1.2"; sha256="0r7gk9qsmbc3ln67cb8p87bq3s2rx6fbavlly1fpzqqv2isf5pq9"; depends=[spatstat]; };
   sirad = derive2 { name="sirad"; version="2.3-3"; sha256="0vhmk2fmq4797gj6c8803zw1ipmdxfvdfgi2bygzxbn5bqd4da2n"; depends=[raster zoo]; };
-  sirt = derive2 { name="sirt"; version="2.3-57"; sha256="1ciyr75hgs3ag14gsmcilr8gpnyaa1drsxiqmjfaj5gr2sgm2107"; depends=[CDM coda lavaan lavaan_survey mirt mvtnorm Rcpp RcppArmadillo sfsmisc survey TAM]; };
+  sirt = derive2 { name="sirt"; version="2.4-20"; sha256="0kgy5jv6yz6hlx4c8mbb4fgqfb8ihslmaxqxlr8qpqh79fvgv2q6"; depends=[CDM coda lavaan lavaan_survey mirt mvtnorm Rcpp RcppArmadillo sfsmisc survey TAM]; };
   sisVIVE = derive2 { name="sisVIVE"; version="1.4"; sha256="1vh53irxgk8ahw52cdqbbm89dvmzyf54izg4lm8a3v92k5p6nzwz"; depends=[lars]; };
   sisal = derive2 { name="sisal"; version="0.46"; sha256="00szc3l69i0cksxmd0lyrs4p6plf05sl4vxs3nl4gkbja5y4lvpc"; depends=[boot digest lattice mgcv R_matlab R_methodsS3]; };
   sisus = derive2 { name="sisus"; version="3.9-13"; sha256="0lz9ww07dvdx6l3k5san8gwq09hycc3mqwpgzmr2ya9z8y27zadr"; depends=[coda gdata gtools MASS moments polyapost rcdd RColorBrewer]; };
@@ -10613,23 +10824,25 @@ in with self; {
   sitreeE = derive2 { name="sitreeE"; version="0.0-1"; sha256="1gb0n5gis4ac0fdjcc496fwpvwmw5iwafpsjy3i1mpkjkxpn7za9"; depends=[sitree]; };
   sivipm = derive2 { name="sivipm"; version="1.1-3"; sha256="1l0j1bi38s09ax4kwikk615lyd074gzg1aa1j2jfmhr3igannm3z"; depends=[seqinr]; };
   sizeMat = derive2 { name="sizeMat"; version="0.3.0"; sha256="0766wxcc1980ivlib2saagl20y9dm0ar7i43qcqk2jpdbbaky33z"; depends=[MASS matrixStats mcmc MCMCpack]; };
-  sjPlot = derive2 { name="sjPlot"; version="2.4.0"; sha256="0ikp9s5fyxjfyblyy8szzcgw10xjxzbcjh618xazv6kb1vs58mfl"; depends=[arm broom dplyr effects forcats ggeffects ggplot2 glmmTMB knitr lme4 magrittr MASS merTools modelr nlme prediction psych purrr rlang scales sjlabelled sjmisc sjstats tibble tidyr tidyselect]; };
+  sjPlot = derive2 { name="sjPlot"; version="2.4.1"; sha256="0aazxrqsbp5jsd5yfm6hrx17rmlqbh5vs314xms7g620aj383zrh"; depends=[arm broom dplyr effects forcats ggeffects ggplot2 glmmTMB knitr lme4 magrittr MASS merTools modelr nlme psych purrr rlang scales sjlabelled sjmisc sjstats tibble tidyr tidyselect]; };
   sjdbc = derive2 { name="sjdbc"; version="1.6.0"; sha256="17ncgj2s2pjn3w3c1dgxv8g7y17h4p78iic86gsj2ahn0xpsmkcc"; depends=[rJava]; };
-  sjlabelled = derive2 { name="sjlabelled"; version="1.0.5"; sha256="1v7pgba03ip9qib0mgja73nfbbk8x109vmpig1rz3zpbnfnkipcn"; depends=[broom dplyr haven magrittr prediction purrr snakecase tibble]; };
-  sjmisc = derive2 { name="sjmisc"; version="2.6.3"; sha256="0x1ij1ff3475s04y0wk9bnqfvclpnz084sk6wh06hndi7vvm0n2f"; depends=[broom cli crayon dplyr haven magrittr psych purrr rlang sjlabelled stringdist stringr tibble tidyr tidyselect]; };
-  sjstats = derive2 { name="sjstats"; version="0.13.0"; sha256="0z4623q1n3ymc98q8klljqh8b45c8gnl7ibh0lz8wla6w1lrykcx"; depends=[bayesplot broom coin dplyr glmmTMB lme4 lmtest magrittr MASS Matrix modelr nlme prediction purrr pwr rlang sandwich sjlabelled sjmisc tibble tidyr tidyselect]; };
+  sjlabelled = derive2 { name="sjlabelled"; version="1.0.7"; sha256="1c2xk4ykf88h601c9ka8mjmk5fn91z2gcl2wx78492npipdxifmw"; depends=[broom dplyr haven magrittr prediction purrr rlang snakecase tibble]; };
+  sjmisc = derive2 { name="sjmisc"; version="2.7.0"; sha256="1bni8ppvabzjx94hd8ygp14n2g6a8qhjvnimm0v7pqbf7czmpapy"; depends=[broom cli crayon dplyr haven magrittr pillar psych purrr rlang sjlabelled stringdist stringr tibble tidyr tidyselect]; };
+  sjstats = derive2 { name="sjstats"; version="0.14.1"; sha256="10siniyy1nqsacayyl7p35yc9gmdh5rjlwzv8aywid2a1ld13lfs"; depends=[bayesplot broom cli coin crayon dplyr emmeans glmmTMB lme4 lmtest magrittr MASS Matrix modelr nlme prediction purrr pwr rlang sandwich sjlabelled sjmisc tibble tidyr tidyselect]; };
   skda = derive2 { name="skda"; version="0.1"; sha256="0a6mksr1d0j3pd0kz4jb6yh466gvl4fkrvgvnlmvivpv6b2gqs3q"; depends=[]; };
   skeleSim = derive2 { name="skeleSim"; version="0.9.8"; sha256="1wxdl30cy8vr1cd0wcjxyklp6crw4bv8r77ma2dkzmxm2ma5jw92"; depends=[adegenet ape hierfstat igraph markdown pegas reshape2 rmetasim shiny shinyFiles strataG swfscMisc]; };
   skeletor = derive2 { name="skeletor"; version="1.0.4"; sha256="1jfbfbkjx8mdwamsrkhvcnyn470in702vgcyw3g2dbgs84gl29q8"; depends=[]; };
   skellam = derive2 { name="skellam"; version="0.2.0"; sha256="0r5wbs5h7xc3k2vjxd4axwnxr9cmwm008fcyj1vyixkg8fa680gx"; depends=[]; };
   skewt = derive2 { name="skewt"; version="0.1"; sha256="1xm00zfzjv53cq9drfcx7w2ri5dwsq7kajrk2hc1mvw0b6s4x2ix"; depends=[]; };
+  skimr = derive2 { name="skimr"; version="1.0.1"; sha256="173ymwkx7n24xj70azdwlpiyswdfy17mw2dhpqcm6ssv0crnjjcc"; depends=[dplyr knitr magrittr pander purrr rlang stringr tibble tidyr tidyselect]; };
   skm = derive2 { name="skm"; version="0.1.5.4"; sha256="06g3bdncq2r56d8k3dr87gqnibypbsps0gj4jxkw9q1sq1yaff3v"; depends=[data_table magrittr plyr Rcpp RcppArmadillo RcppParallel]; };
   skmeans = derive2 { name="skmeans"; version="0.2-11"; sha256="1a8nwlym6pf0z13nnw1id2wls9lq788860yhjaqd56c3slzfsymn"; depends=[clue cluster slam]; };
-  skpr = derive2 { name="skpr"; version="0.40.1"; sha256="1sg2qw9k0sndsnva9kbz6iasjnjcc6g91kglic64rdanrvh0xvaw"; depends=[doParallel foreach iterators lme4 nlme Rcpp RcppArmadillo rintrojs shiny shinythemes survival]; };
+  skpr = derive2 { name="skpr"; version="0.45.2"; sha256="1wi19rz9mhim91pqdzljjscpsv2dbm838jjbv9ynmscjnfcbbfl6"; depends=[doParallel foreach iterators kableExtra knitr lme4 nlme Rcpp RcppArmadillo rintrojs shiny shinythemes survival]; };
+  skynet = derive2 { name="skynet"; version="1.0"; sha256="00i3gvl9hz72id449wph8f0gncps6gzj0yz4n34ys8ih0j8n8b81"; depends=[data_table dplyr ggplot2 ggrepel igraph maps stringr]; };
   skyscapeR = derive2 { name="skyscapeR"; version="0.2.2"; sha256="08h3vvn9zglw3xrl0xpyj95r1n3v6lk835a4nbanxdvi21mgpi77"; depends=[astrolibR doParallel foreach MESS numDeriv oce plotrix png pracma RColorBrewer rootSolve]; };
   sla = derive2 { name="sla"; version="0.1"; sha256="0fr5n65ppwsh9z7a6rma9ak0bl8x3nz7v25lij7wb5nrf3sl74yb"; depends=[]; };
   slackr = derive2 { name="slackr"; version="1.4.2"; sha256="1vm2h5fzcss3xx1annx68wrvv6c0s6h2ci0bipxmdl9amdaqw85w"; depends=[dplyr ggplot2 httr jsonlite]; };
-  slam = derive2 { name="slam"; version="0.1-40"; sha256="1di5qs8sz4bh47653kmjcdbdxir03k3nin8mh817ga9af7aa3b5g"; depends=[]; };
+  slam = derive2 { name="slam"; version="0.1-42"; sha256="1pvmfvqa2gcwmap41rp3rx9jrk16jvw80pq0hf5qgja4jlcb01kj"; depends=[]; };
   sld = derive2 { name="sld"; version="0.3.2"; sha256="0za5pw7ki419ni9pqqzddb10d16nvv5rh5jrkl4f77j0ps2ajylp"; depends=[lmom]; };
   sleekts = derive2 { name="sleekts"; version="1.0.2"; sha256="0syk244xrsv8hz5sxm7wizk0kyn1nc6z4c63c8xn57fz130zj75k"; depends=[]; };
   slfm = derive2 { name="slfm"; version="0.2.2"; sha256="01n9y6kyl7z1ynckp2hkrv2yl9jf30zcbbi3sx9jrcha557fg1cf"; depends=[coda lattice Rcpp RcppArmadillo]; };
@@ -10642,13 +10855,13 @@ in with self; {
   smaa = derive2 { name="smaa"; version="0.2-5"; sha256="1mwahjgslk82f8bl6qcjs1yadhbnqrxxhvkffkgc2fv3s6lh5d9m"; depends=[]; };
   smac = derive2 { name="smac"; version="1.0"; sha256="1inn7i5k0q5vln24kazh3gl3szf6lxwnjr2rw70jcyn9dr9iy952"; depends=[]; };
   smacof = derive2 { name="smacof"; version="1.9-6"; sha256="19x11011w8kwdbd0jp7y7zqhmn0a5bhc9gh7jkcpxij8ppiigh8y"; depends=[candisc colorspace ellipse Hmisc MASS nnls plotrix polynom weights wordcloud]; };
-  smacpod = derive2 { name="smacpod"; version="1.4.1"; sha256="17f28nax92nkfgs972gqcjnnz6sw4p8n36rrhx00dy19vr569kp5"; depends=[plotrix SpatialTools spatstat]; };
+  smacpod = derive2 { name="smacpod"; version="2.0"; sha256="05bylhh98qlnq4gn0wwg3wb3pwa1q2kh06v2skj2fgbjgr03fhkn"; depends=[abind pbapply plotrix sp SpatialTools spatstat]; };
   smallarea = derive2 { name="smallarea"; version="0.1"; sha256="0jcv0xbh8v4g6zxxs4yyd0divwzk9d2w7g01r4s65khxvy3av7yx"; depends=[MASS]; };
   smam = derive2 { name="smam"; version="0.3-0"; sha256="1sdr0ki2y9smiwfglgh97kj6y0n1z3blyyxk823xp3467byk1rnb"; depends=[Matrix numDeriv Rcpp]; };
   smapr = derive2 { name="smapr"; version="0.1.1"; sha256="0ci0j26nsgl4yi0b0bhxqgpn281ml5clhih2nl7hm5l8nybdyp3q"; depends=[httr rappdirs raster rhdf5 rvest xml2]; };
   smart = derive2 { name="smart"; version="1.0.1"; sha256="0ki3qn71zrw0nyv395qijcwahnxyv1p21j8x6cxr9spah2wzz8lb"; depends=[elasticnet gplots gtools igraph Matrix pcaPP PMA]; };
   smatr = derive2 { name="smatr"; version="3.4-3"; sha256="0iiazln4albj7k5w67slvyn98cqg4f6k409mml0n1pvlkki0h7gy"; depends=[plyr]; };
-  smbinning = derive2 { name="smbinning"; version="0.4"; sha256="13n3vc83rk6nicid41z47srwy5lfaa7kral2iphpb5ngji00gq1i"; depends=[Formula gsubfn partykit sqldf]; };
+  smbinning = derive2 { name="smbinning"; version="0.5"; sha256="1ac3apbkmhwvm0fds92j82r63krj94m69g0sid2v9mimdq30k25i"; depends=[Formula gsubfn partykit sqldf]; };
   smcUtils = derive2 { name="smcUtils"; version="0.2.2"; sha256="0d1kmg386j0zrpp8vgxjwvpf1i25l86xrh82767xkp0n9qj8srwq"; depends=[]; };
   smcfcs = derive2 { name="smcfcs"; version="1.3.0"; sha256="1860qzhfpdr78a8ha8537izbkm0dx9j63l9fv6mswcs5sjl25i09"; depends=[MASS survival VGAM]; };
   smco = derive2 { name="smco"; version="0.1"; sha256="1sj3y1x6pc32cwzyhn9gaxs964xh5xl4vw08hsa8kfcxhh2r0s99"; depends=[]; };
@@ -10656,13 +10869,13 @@ in with self; {
   smdata = derive2 { name="smdata"; version="1.1"; sha256="1hcr093xfkp88fn75imjkmfnp9cfsng5ndxpa8m2g0l29qhpxfvk"; depends=[]; };
   smdc = derive2 { name="smdc"; version="0.0.2"; sha256="1j6xnzjbmmakbmk3lyjck3bsy8w8hyd9d8h04s4gbddhci283mqm"; depends=[proxy tm]; };
   smds = derive2 { name="smds"; version="1.0"; sha256="0aqf3wfn6mlsl8a32gaf9qdpyxwsx19g6mma8qzgaysdmk6vhbpd"; depends=[MASS]; };
-  sme = derive2 { name="sme"; version="0.8"; sha256="1djrs3z699p6q2y1hfywh27csqc9cp1cfm3lxkigmmvxqjhyshz6"; depends=[lattice]; };
+  sme = derive2 { name="sme"; version="1.0.2"; sha256="0gszpy1sx2qsypps3iza79sab475wcrscl7wnbbrv97a3ry0ybp6"; depends=[lattice]; };
   smerc = derive2 { name="smerc"; version="0.2.2"; sha256="0x1n1plnq63grs09cijhy265xqrfg9az1pp9n5dg5wqlj6gf9rzi"; depends=[fields igraph maps smacpod SpatialTools spdep]; };
   smfsb = derive2 { name="smfsb"; version="1.1"; sha256="0khd23b6k9zgxz2x6g6c6k2g32mbpli32izdq6fgk1a990kdsp6j"; depends=[]; };
   smirnov = derive2 { name="smirnov"; version="1.0-1"; sha256="09mpb45wj8rfi6n6822h4c335xp2pl0xsyxgin1bkfw97yjcvrgk"; depends=[]; };
   smnet = derive2 { name="smnet"; version="2.1.1"; sha256="0fa47zgm7jxvs3jfai54wsc6qa9ycqw4f3yr941fvkczwzh4ch02"; depends=[DBI RSQLite spam SSN]; };
   smoof = derive2 { name="smoof"; version="1.5.1"; sha256="01jkldmxn86vmcmmz81mdlhpm1m3bddj4sv550a3b4wm1r3gddng"; depends=[BBmisc checkmate ggplot2 mco ParamHelpers plot3D plotly RColorBrewer Rcpp RcppArmadillo RJSONIO]; };
-  smooth = derive2 { name="smooth"; version="2.2.1"; sha256="1616rxpmzmjy44a2i463zlv6ldwda7f4ly7dffj5dk7rrsh46k0w"; depends=[forecast nloptr Rcpp RcppArmadillo zoo]; };
+  smooth = derive2 { name="smooth"; version="2.4.0"; sha256="1492zbfhpijpdikb260m02rv876gc4xr3py645x760icyz7h9fpx"; depends=[forecast nloptr Rcpp RcppArmadillo zoo]; };
   smoothAPC = derive2 { name="smoothAPC"; version="0.2"; sha256="06f0d4bjygpgcayzg9cxcb5plhsls0ljla2mrmjnjxpq8g3c3cl8"; depends=[colorspace lmtest quantreg rgl SparseM]; };
   smoothHR = derive2 { name="smoothHR"; version="1.0.2"; sha256="0l33xg3p9pyfrp4rhavz8m1jakk4wr8i14g6jjiizb03rpxdpzqy"; depends=[survival]; };
   smoothSurv = derive2 { name="smoothSurv"; version="2.0"; sha256="0ypgmqf7mj0x0ibid9qx6cbqn4cpig8333g095b64297bf0syvjc"; depends=[survival]; };
@@ -10670,13 +10883,14 @@ in with self; {
   smoothie = derive2 { name="smoothie"; version="1.0-1"; sha256="12p4ig8fbmlsby5jjd3d27njv8j7aiwx0m2n1nmgvjj0n330s1kj"; depends=[]; };
   smoothmest = derive2 { name="smoothmest"; version="0.1-2"; sha256="14cri1b6ha8w4h8m26b3d7qip211wfv1sywgdxw3a6vqgc65hmk5"; depends=[MASS]; };
   smoothtail = derive2 { name="smoothtail"; version="2.0.5"; sha256="1sqkwniz9m03k23nba9ndmdm0g03mdshzm8risr6wz98jcqjilrk"; depends=[logcondens]; };
-  smotefamily = derive2 { name="smotefamily"; version="1.1"; sha256="1qriyvfa6vgs7i8al7sipz0a887jzbw725kxsfa9mw22h6wm1ld8"; depends=[]; };
+  smotefamily = derive2 { name="smotefamily"; version="1.2"; sha256="166gqwqljips2r0030m3q44zmxlnxcpb9hmwbg1bk3dqk9gfl8ra"; depends=[]; };
   smpic = derive2 { name="smpic"; version="0.1.0"; sha256="0ff2146gjcrc6nvrbf4779jh076abhb843zzlk2zvqir13qfap61"; depends=[ggplot2 imager stringr]; };
   sms = derive2 { name="sms"; version="2.3.1"; sha256="0vr5jy8bxbczaqr9kg0fnanxhv9nj51yzgacrb63k33cs85p981m"; depends=[doParallel foreach iterators]; };
   smss = derive2 { name="smss"; version="1.0-2"; sha256="04lgfdcvnzpnpplyl62fy7slyiy8wkqpjjrzmclgqis3c9zkkncp"; depends=[]; };
   sn = derive2 { name="sn"; version="1.5-1"; sha256="0l7qlah6dwkp8jswnr2mn3phlm15naba5zkmv0g5pcqy5ix0gz7w"; depends=[mnormt numDeriv]; };
   sna = derive2 { name="sna"; version="2.4"; sha256="1ks8819qvpdfansfqj9p32s1rhvl26frvbi78m4rx1wd1qcv74i2"; depends=[network statnet_common]; };
-  snakecase = derive2 { name="snakecase"; version="0.5.1"; sha256="0mgnmdjrg3xkhfq5mc29ixpaw12fm4052i5733xc2ch6793ikmpm"; depends=[magrittr purrr stringi stringr]; };
+  snakecase = derive2 { name="snakecase"; version="0.8.1"; sha256="0vpzvdb1acph9xs52lw7hhd3a58lm5k9fmgkw70fijsrciihz6ns"; depends=[magrittr purrr stringi stringr]; };
+  snappier = derive2 { name="snappier"; version="0.1.0"; sha256="0334zwhqdl3lfw7rg8ql7z10qj8jjrm17yi9mgdcxnzaf3f1p859"; depends=[]; };
   snapshot = derive2 { name="snapshot"; version="0.1.2"; sha256="0cif1ybxxjpyp3spnh98qpyw1i5sgi1jlafcbcldbqhsdzfz4q10"; depends=[]; };
   snht = derive2 { name="snht"; version="1.0.5"; sha256="0k8w1118b2qrf5zfi902gm6zf7b1mwv7py7wg57vsibh2r2ra8ah"; depends=[ggplot2 gridExtra mgcv plyr reshape2 zoo]; };
   snipEM = derive2 { name="snipEM"; version="1.0"; sha256="0f98c3ycl0g0l3sgjgk7xrjp6ss7n8zzlyzvpcb6agc60cnw3w03"; depends=[GSE MASS mvtnorm Rcpp RcppArmadillo]; };
@@ -10686,44 +10900,45 @@ in with self; {
   snowFT = derive2 { name="snowFT"; version="1.6-0"; sha256="00rq2xibzhx7441v9jg138a4fkmx28hifs4yyj3pwi8najf0df4n"; depends=[rlecuyer snow]; };
   snowboot = derive2 { name="snowboot"; version="0.5.2"; sha256="07mly89x9mj5cvpmi45xmlr4d1l1d2fdcagmniviqqqhmllc50pi"; depends=[igraph Rcpp VGAM]; };
   snowfall = derive2 { name="snowfall"; version="1.84-6.1"; sha256="13941rlw1jsdjsndp1plzj1cq5aqravizkrqn6l25r9im7rnsi2w"; depends=[snow]; };
+  snowflakes = derive2 { name="snowflakes"; version="1.0.0"; sha256="0adna9jfs0wv4dhyjczxhq7c0ldjfai07p1q9119avxyilv9x0vi"; depends=[]; };
   snp_plotter = derive2 { name="snp.plotter"; version="0.5.1"; sha256="16apsqvkah5l0d5qcwp3lq2jspkb6n62wzr0wskmj84jblx483vv"; depends=[genetics]; };
   snpEnrichment = derive2 { name="snpEnrichment"; version="1.7.0"; sha256="1lja1n26nr8lgbca2kraryv933jwa2w3h41appzylflf0w3liz9y"; depends=[ggplot2 snpStats]; };
   snpRF = derive2 { name="snpRF"; version="0.4"; sha256="1amxc4jprrc6n5w5h9jm2as025gqdqkla2asz7x97sjdnnj9kzzn"; depends=[]; };
   snpReady = derive2 { name="snpReady"; version="0.9.4"; sha256="16nfwjda15gjk0y1rvvnlbx350rgdvpk397glp7yl2ji0amwv20r"; depends=[Matrix matrixcalc stringr]; };
   snpStatsWriter = derive2 { name="snpStatsWriter"; version="1.5-6"; sha256="04qhng888yih8gc7yd6rrxvvqf98x3c2xxz22gkwqx59waqd4jlq"; depends=[colorspace snpStats]; };
   snpar = derive2 { name="snpar"; version="1.0"; sha256="0c9myg748jm7khqs8yhg2glxgar1wcf6gyg0xwbmw0qc41myzfnq"; depends=[]; };
-  snplist = derive2 { name="snplist"; version="0.18"; sha256="1x1l6z34b6k6325rjjmfa5nkbf5j472hrn9lyiw8s7h1wvf4gc1v"; depends=[biomaRt DBI R_utils Rcpp RSQLite]; };
+  snplist = derive2 { name="snplist"; version="0.18.1"; sha256="14x31h8h3lx25rm30vhp89byrzy3qrmawi07pmzy4xpxdf0rxm4s"; depends=[biomaRt DBI R_utils Rcpp RSQLite]; };
   sns = derive2 { name="sns"; version="1.1.2"; sha256="132zd57xb2y0nshw4lakf49r2mvvkv7j32f7l7hqrh91mw7wyqpr"; depends=[coda mvtnorm numDeriv]; };
   soc_ca = derive2 { name="soc.ca"; version="0.7.3"; sha256="0z3phmvgwd3s6swfaywq851my12a2n48i6k26vhggc6pf9d28phl"; depends=[ellipse ggplot2 ggrepel gridExtra reshape2 shiny]; };
   social = derive2 { name="social"; version="1.0"; sha256="0ny81bhj80rlwwa6cgbkdz2rxz6bp0f3nvjr1sqxr4s8l8rnf4ic"; depends=[Rcpp]; };
+  socialmixr = derive2 { name="socialmixr"; version="0.1.1"; sha256="1immpjc4p7xjc4ghhb3l4wilacg6h0gpihmhx60309gi1snz23ai"; depends=[countrycode curl data_table httr jsonlite oai stringr wpp2015]; };
   sodavis = derive2 { name="sodavis"; version="1.0"; sha256="1mhmrg7c0chwjw117pzjya5y0ml8mm9ps5b64q5cjchlxr8900nx"; depends=[MASS mvtnorm nnet]; };
   sodium = derive2 { name="sodium"; version="1.1"; sha256="1zxzi8xvxnhgcd5qrylf08nz1cdq3aslrswjas440qg63ypmbf6w"; depends=[]; };
-  sofa = derive2 { name="sofa"; version="0.2.0"; sha256="0jjc3r25qprxrhwwzx4b70i51v8gygxwx3x9d1zydx9hw1plk0mb"; depends=[httr jsonlite mime R6]; };
+  sofa = derive2 { name="sofa"; version="0.3.0"; sha256="10f01a23bq6a30f95cilfan588dg0bg36y7g14q46rmcz15cqbrx"; depends=[crul jsonlite mime R6]; };
   softImpute = derive2 { name="softImpute"; version="1.4"; sha256="07cxbzkl08q58m1455i139952rmryjlic4s2f2hscl5zxxmfdxcq"; depends=[Matrix]; };
   softclassval = derive2 { name="softclassval"; version="1.0-20160527"; sha256="1f5qj5sajy3dg0mgss6f9w6v5a2prcypld9jcv457bd4n4a409kr"; depends=[arrayhelpers svUnit]; };
   softermax = derive2 { name="softermax"; version="0.3.0"; sha256="0shsd7cbj8j8z65flyddkjdpigyyqpw4j6ljl9pl9hwasksi05gk"; depends=[readr xml2]; };
   softmaxreg = derive2 { name="softmaxreg"; version="1.2"; sha256="0y1r4n83sv2744lpli65aip0c0cq823asb8gw9yy9yjjc9sbyr9s"; depends=[]; };
   soil_spec = derive2 { name="soil.spec"; version="2.1.4"; sha256="129iqr6fdvlchq56jmy34s6qc2j5fcfir6pa5as5prw0djyvbdv0"; depends=[GSIF hexView KernSmooth pls sp wavelets]; };
-  soilDB = derive2 { name="soilDB"; version="1.8.14"; sha256="1q7sfn9dbiq5as3ls4n35s9c6cabsg7dz30rl63w5mqxp0m5k3c3"; depends=[aqp curl Hmisc plyr raster reshape2 sp xml2]; };
+  soilDB = derive2 { name="soilDB"; version="2.0-1"; sha256="0nzi0fss77x0bjdzslhy0flwvhap0i0cq3xw82x7sggnbmc3ya72"; depends=[aqp curl Hmisc plyr raster reshape2 sp xml2]; };
   soilcarbon = derive2 { name="soilcarbon"; version="1.2.0"; sha256="1gxq7np5xh3jcqbsf8xva4b82rv6rab2j23mbkc4pjs6nbnzvzba"; depends=[devtools ggplot2 openxlsx shiny]; };
   soilphysics = derive2 { name="soilphysics"; version="3.1"; sha256="11c094bqbwhggh0n3hdva1321gqzz2k1b7v3767wyyk1xpgzg98r"; depends=[boot MASS rpanel tkrplot]; };
   soilprofile = derive2 { name="soilprofile"; version="1.0"; sha256="0sdfg6m2m6rb11hj017jx2lzcgk6llb01994x749s0qhzxmvx9mb"; depends=[aqp lattice munsell splancs]; };
-  soiltexture = derive2 { name="soiltexture"; version="1.4.1"; sha256="1rvrji3xrs6smxcgggl6phnbx595wl1s2d8djnvzfca20k9q6a1q"; depends=[MASS sp]; };
+  soiltexture = derive2 { name="soiltexture"; version="1.4.5"; sha256="0a9n89ygfqpm6sir76ginri1l6gmw3gfd58szl4ikzaz8fk5hxqh"; depends=[MASS sp]; };
   soilwater = derive2 { name="soilwater"; version="1.0.5"; sha256="11gal7hj73j82qx65krmzpmf0gpm41ph8hw70df46dbf4w23vvjn"; depends=[]; };
   solaR = derive2 { name="solaR"; version="0.44"; sha256="1waxi2zfns4dh1vpsl3khbgaw07icp4f1ax9l0pry9qipmk0nk3k"; depends=[lattice latticeExtra RColorBrewer zoo]; };
   solarPos = derive2 { name="solarPos"; version="1.0"; sha256="0004da7vqpq14q5lhs8vyvjl99j8gzxd5wrlw5d1vwfns3ica0q5"; depends=[]; };
   solarius = derive2 { name="solarius"; version="0.3.0.2"; sha256="17c765nxq81xshyyl4lfhqjmgvmhn9xyzc6x4qd33wvhh4148f38"; depends=[data_table ggplot2 plyr]; };
-  solidearthtide = derive2 { name="solidearthtide"; version="1.0.2"; sha256="0274f7vyjymx6hd7ik68hznip57ni4cxp1bw7z91v1jzp3ch17rv"; depends=[]; };
   solr = derive2 { name="solr"; version="0.1.6"; sha256="0hlysi1yw4l98dcb1shznzrgia9pqzfj0p1hmnfz5gz2j64lf4h4"; depends=[assertthat httr plyr rjson XML]; };
   solrium = derive2 { name="solrium"; version="1.0.0"; sha256="1rlf60kynqb8pvzllfdkiabxgnqx60hwm8vy86y9f2bh7d7jsdhf"; depends=[crul dplyr jsonlite plyr R6 tibble xml2]; };
-  solvebio = derive2 { name="solvebio"; version="2.2.0"; sha256="0va59rfjpa6x5v3xzrhmrb882gf04sd9nilnlpvjhnfjj3xaavcq"; depends=[dplyr httr jsonlite mime]; };
+  solvebio = derive2 { name="solvebio"; version="2.3.1"; sha256="0mbb7ri8shknlw1m7985as84i0m837awpsd89yxc5gr1hvzgdvlh"; depends=[dplyr httr jsonlite mime]; };
   som = derive2 { name="som"; version="0.3-5.1"; sha256="1fbza1jxvwrkf5x3inkj36vshhkn7mz0ajqlxalbfmk6ngjw1x56"; depends=[]; };
   som_nn = derive2 { name="som.nn"; version="1.1.0"; sha256="0mw2c2lqvdq9bhndpjyawjy43l4x7clcsx2350j45g7fnchhy602"; depends=[class hexbin kohonen som]; };
   soma = derive2 { name="soma"; version="1.1.1"; sha256="1mc1yr9sq9h2z60v40aqmil0xswj5hgxfdh4racq297qw3a97my4"; depends=[reportr]; };
   someKfwer = derive2 { name="someKfwer"; version="1.2"; sha256="0widny5l04ja91fy16x4giwrabwqhx0fs3yl48pv9xh4zj6sx563"; depends=[]; };
   someMTP = derive2 { name="someMTP"; version="1.4.1"; sha256="19bsn8rny1vv9343bvk8xzhh82sskl0zg0f5r59g9k812q5llchn"; depends=[]; };
   somebm = derive2 { name="somebm"; version="0.1"; sha256="1iwwc94k6znh4d3bbjnvwp4chc4wg0iy4v2f99cs4jasrsimb4p8"; depends=[]; };
-  sommer = derive2 { name="sommer"; version="3.1"; sha256="0b10hfny4xl00n16fj7mzm6qsd0548q02sir3sskqr13zhzqwr77"; depends=[MASS Matrix]; };
+  sommer = derive2 { name="sommer"; version="3.2"; sha256="0kqk04db3s3c9ba1gy4k2gj4s6lzyns3lmj463d9v9gpk5wwq77m"; depends=[data_table lattice MASS Matrix]; };
   somplot = derive2 { name="somplot"; version="1.6.4"; sha256="06c8p2lqz3yxmxdl7ji8a3czvxnsbl7bwyiig76pkwc3a5qqfbb9"; depends=[hexbin]; };
   sonar = derive2 { name="sonar"; version="1.0.2"; sha256="1f0f5iqi3y9vnxyym14nm8dqxw0vcpnxmvvkx4sm612i4fclg1f9"; depends=[]; };
   sonicLength = derive2 { name="sonicLength"; version="1.4.4"; sha256="1v46xzx3jxxxs2biyrq6xbv2lhpz1i95la93hj6dl4jfyikmx0im"; depends=[]; };
@@ -10740,25 +10955,25 @@ in with self; {
   sotu = derive2 { name="sotu"; version="1.0.2"; sha256="0aqwkawaydsm91hz13msjg1a5llg7xmv6hxmfmsaganrl7iaym3c"; depends=[]; };
   sound = derive2 { name="sound"; version="1.4.5"; sha256="1kbbb614d0fmj9l0yjiwf5yqnl7sby4xklp7qwp6rwjvq9bnm0ab"; depends=[]; };
   soundecology = derive2 { name="soundecology"; version="1.3.2"; sha256="1ig04hdxwailsp4lv5y9q73x7vb6hl4dw9zlb05gbccvid5vmdsh"; depends=[ineq oce pracma seewave tuneR vegan]; };
-  soundgen = derive2 { name="soundgen"; version="1.1.0"; sha256="0fqdxbjjn1mz4g4yq1mwfjghyfnlzrdbcpnkas4rasyg8npmm54s"; depends=[dtw mvtnorm phonTools plyr reshape2 seewave shiny tuneR zoo]; };
+  soundgen = derive2 { name="soundgen"; version="1.1.2"; sha256="13n3gr3hwy3ph9kb4fmx87qwndijxf04nvy13sjaazmvq9q9dfbg"; depends=[dtw mvtnorm phonTools plyr reshape2 seewave shiny tuneR zoo]; };
   source_gist = derive2 { name="source.gist"; version="1.0.0"; sha256="03bv0l4ccz9p41cjw18wlz081vbjxzfgq3imlhq3pgy9jdwcd8fp"; depends=[RCurl rjson]; };
   sourceR = derive2 { name="sourceR"; version="1.0.1"; sha256="01qxa44s9szaxl0rdcx4p0wn4vby17hdzdjzpsbls3prsnr0jaad"; depends=[assertthat cluster dplyr gplots gtools hashmap R6 reshape2 SPIn tensorA]; };
   sourcetools = derive2 { name="sourcetools"; version="0.1.6"; sha256="0l8c6fql82cb246qh7hfgxb4s35qn0qfgy6dzvkx0zkz1cpqvx69"; depends=[]; };
-  sp = derive2 { name="sp"; version="1.2-5"; sha256="09yydnacp33yx0kn537k96fjlbf75fjafqfknpa5gvci4l888bqd"; depends=[lattice]; };
+  sp = derive2 { name="sp"; version="1.2-7"; sha256="0q04yfgyjannsrzl0ppwcv0simrxrrbx2iz5mzaafc5x38zf0q3d"; depends=[lattice]; };
   sp23design = derive2 { name="sp23design"; version="0.9"; sha256="1ihvcld19cxflq2h93m9k9yaidhwixvbn46fqqc1p3wxzplmh8bs"; depends=[mvtnorm survival]; };
-  spAddins = derive2 { name="spAddins"; version="0.1.7"; sha256="1ci246770j40zzmsjwjqwkwi6b2w5qwb0n4f4wah5rjf6zjwkd5r"; depends=[rstudioapi]; };
+  spAddins = derive2 { name="spAddins"; version="0.2.0"; sha256="19wbcghcf0f9qvqy92jhsdcpmd9b4lkhxndvr71cyhzga539lh1n"; depends=[magrittr purrr rstudioapi stringr]; };
   spBayes = derive2 { name="spBayes"; version="0.4-1"; sha256="1cypl3kvcr7nwdkq59zpdhkasz0z5r2gk8hr6wf1a1992k8c33ag"; depends=[abind coda Formula magic]; };
-  spBayesSurv = derive2 { name="spBayesSurv"; version="1.1.1"; sha256="0pcfy3w2aqld10w9jdcizcy0rdpmdaj8z7qwpam4s2f6sap1q26b"; depends=[coda fields MASS Rcpp RcppArmadillo survival]; };
-  spData = derive2 { name="spData"; version="0.2.6.7"; sha256="0yyg9lfi2xxpqsdbd4ci26ifmm4s4510wj5r09j403l2inyz4gbp"; depends=[]; };
-  spMC = derive2 { name="spMC"; version="0.3.8"; sha256="1glkyv6wmh766ssdlm4z7dck32r0284kwah0ksmmkwxkfw1qx7xb"; depends=[]; };
-  spMaps = derive2 { name="spMaps"; version="0.1"; sha256="0cmz87cd95c04qw8czlf9a0ds48nwa1z8iqq330y1lmakp24kwij"; depends=[sp]; };
+  spBayesSurv = derive2 { name="spBayesSurv"; version="1.1.2"; sha256="0m1432gkjkkqmzhksv19yca1wyvp5vjwcmpavhiik4ghfx72rgrr"; depends=[coda fields MASS Rcpp RcppArmadillo survival]; };
+  spData = derive2 { name="spData"; version="0.2.7.4"; sha256="1gkzcd9sy7ca2s8xa45vn0j4ismb28i8vjskw2fldfl3aglss4qp"; depends=[]; };
+  spMC = derive2 { name="spMC"; version="0.3.9"; sha256="10cvha5j2pi3b2qiq3jbrc10yi84a595zlg0wshx3wrzxb1rim85"; depends=[]; };
+  spMaps = derive2 { name="spMaps"; version="0.2"; sha256="1rrrkbj9bvs217dgvwm686zczcwjqcbq0x268cwl6qnsm39mxzzf"; depends=[raster rgeos sp]; };
   spNNGP = derive2 { name="spNNGP"; version="0.1.1"; sha256="0b55arvy5xr592bs2082djyzaa48jbv0y85h7nnj479f8c31grqp"; depends=[coda Formula RANN]; };
   spTDyn = derive2 { name="spTDyn"; version="2.0"; sha256="0wandd5iqyqb474096lky04rrgj31gnyqnlmgw8ypxsypd0gqdy0"; depends=[coda sp spacetime spTimer]; };
-  spTest = derive2 { name="spTest"; version="0.2.4"; sha256="1pfyrim6m0pcwsxpin9z09569yzil49hsz5mndp723c9wkk8vn5h"; depends=[geoR sp]; };
+  spTest = derive2 { name="spTest"; version="0.2.5"; sha256="11x2wq3031mqbj4n6hvb4l3sp4382qankdl1v1qh7ab2xa0h6xw8"; depends=[geoR sp]; };
   spThin = derive2 { name="spThin"; version="0.1.0"; sha256="06qbk0qiaw7ly1ywbr4cnkmqfasymr7gbhvq8jjbljm0l69fgjpp"; depends=[fields knitr spam]; };
   spTimer = derive2 { name="spTimer"; version="3.0-1"; sha256="1vl26d248642grca63kv1rsghqscchkhbybby0fgfg58v042qbs5"; depends=[coda sp spacetime]; };
   spa = derive2 { name="spa"; version="2.0"; sha256="1np50qiiy3481xs8w0xfmyfl3aypikl1i1w8aa5n2qr16ksxrnq3"; depends=[cluster MASS]; };
-  spaMM = derive2 { name="spaMM"; version="2.2.0"; sha256="1yrzcr6s2ajan5y2kb5c3llfvy0m26a3cgx149zbn51xivwjg5dn"; depends=[MASS Matrix nlme nloptr proxy Rcpp RcppEigen]; };
+  spaMM = derive2 { name="spaMM"; version="2.3.0"; sha256="1625nplyxklviifhalfwylc0cr2qlhrr57zhm3dj3n2daxjhid87"; depends=[MASS Matrix nlme nloptr proxy Rcpp RcppEigen]; };
   spaa = derive2 { name="spaa"; version="0.2.2"; sha256="163iipz1knxx1lzby9a3n1f014yqkf25z1wpwwy4gbx7sia499d5"; depends=[]; };
   space = derive2 { name="space"; version="0.1-1"; sha256="1qigfz62xz47hqi43aii3yr4h7ddvaf11a5nil7rqprgkd0k6mv3"; depends=[]; };
   spaceExt = derive2 { name="spaceExt"; version="1.0"; sha256="0lp8qmb7vcgxqqpsi89zjy7kxpibg3x2mq205pjmsrbbh7saqzr4"; depends=[glasso limSolve]; };
@@ -10766,12 +10981,13 @@ in with self; {
   spacetime = derive2 { name="spacetime"; version="1.2-1"; sha256="1i6yrmyr9vc5lr99w7qhr0jqdx97ckjqay5g0lqdrk98sygpfl4g"; depends=[intervals lattice sp xts zoo]; };
   spacodiR = derive2 { name="spacodiR"; version="0.13.0115"; sha256="0c0grrvillpwjzv6fixviizq9l33y7486ypxniwg7i5j6k36nkpl"; depends=[colorspace picante Rcpp]; };
   spacom = derive2 { name="spacom"; version="1.0-5"; sha256="0b6yh4q9f0ibwlwyckwaya9m645j22x6bdz9mz3chass8qza6bls"; depends=[foreach iterators lme4 Matrix nlme spdep]; };
-  spacyr = derive2 { name="spacyr"; version="0.9.3"; sha256="1fbb7sdcq97jmhknv430awcsq0dqwzmpw7w7ackg0frdjcwv7rk0"; depends=[data_table reticulate]; };
+  spacyr = derive2 { name="spacyr"; version="0.9.6"; sha256="0s4gn2nfd2bamvpzk68n4ym1nylzay8hrgkax6c9ghhvi3p7rch7"; depends=[data_table reticulate]; };
   spaero = derive2 { name="spaero"; version="0.2.0"; sha256="0srkah89z23j30y2smlnyhf97mm123apma8vgmgfarbx188bkwpn"; depends=[]; };
-  spam = derive2 { name="spam"; version="2.1-1"; sha256="1j6yppyf3sngpmq99w0d3j8wlrmjsfsixw902rl6339w985b1lxc"; depends=[dotCall64]; };
-  spam64 = derive2 { name="spam64"; version="2.1-1"; sha256="0l34z630q749b27w033n504x6lspgz1d8jrw4cnzs6jkrlz6paw7"; depends=[]; };
+  spam = derive2 { name="spam"; version="2.1-2"; sha256="06c2bal2hj4qjb65qagfq6icy52cjn8sn8yl0c0dbzcz4gmidvy2"; depends=[dotCall64]; };
+  spam64 = derive2 { name="spam64"; version="2.1-2"; sha256="15cjdz71fh04hcqjn93lnnqbmyfgm67p1x5lyiiq3wz7k1fk5a0h"; depends=[]; };
   spanel = derive2 { name="spanel"; version="0.1"; sha256="1riyvvfij277mclgik41gyi01qv0k466wyk2wbqqhlvrlj79yzsc"; depends=[]; };
-  spant = derive2 { name="spant"; version="0.6.0"; sha256="16gpaga9zppc9jz9wy3jp8r944q477yx56mlyrb19ngiy2qsx0vw"; depends=[abind complexplus foreach matrixcalc minpack_lm nnls plyr pracma signal smoother stringr svd tkrplot]; };
+  spanish = derive2 { name="spanish"; version="0.3.2"; sha256="1dg4wnvxhybhagag9xx27af6760dlclaivx27mfxywfha312xfpn"; depends=[magrittr xml2]; };
+  spant = derive2 { name="spant"; version="0.7.0"; sha256="1lcv8lblc6arbmjxy6mskr2iprxij7b4sgn7xm9imvcqx5jibzjq"; depends=[abind complexplus foreach matrixcalc minpack_lm nnls plyr pracma signal smoother stringr svd tkrplot]; };
   sparc = derive2 { name="sparc"; version="0.9.0"; sha256="0jsirrkmvrfxav9sphk8a4n52fg0d1vnk3i8m804i4xl0s7lrg8s"; depends=[]; };
   sparcl = derive2 { name="sparcl"; version="1.0.3"; sha256="1348pi8akx1k6b7cf4bhpm4jqr5v8l5k086c7s6rbi5p6qlpsrvz"; depends=[]; };
   spareserver = derive2 { name="spareserver"; version="1.0.1"; sha256="094q5i6v4v37hzfdyps8zni394z312r802hl04jw0xzzps922rq4"; depends=[assertthat httr pingr]; };
@@ -10780,11 +10996,12 @@ in with self; {
   sparkTable = derive2 { name="sparkTable"; version="1.3.0"; sha256="1fc2nihxfrjpmxm9g9296mz5czd3ydvi1v37g8qgb20j7b73c64h"; depends=[boot Cairo ggplot2 gridExtra pixmap Rglpk RGraphics shiny StatMatch xtable]; };
   sparkavro = derive2 { name="sparkavro"; version="0.1.0"; sha256="0jihqvjs7dgyxhyzhsbki7khy7fjniwf9xwlangzqfi4rcan8g7x"; depends=[DBI dplyr sparklyr]; };
   sparkline = derive2 { name="sparkline"; version="2.0"; sha256="0lrr1lm7603di7x3mf53cp13d9ssjh9gmb43wa6z9yqapis2djm2"; depends=[htmltools htmlwidgets]; };
-  sparklyr = derive2 { name="sparklyr"; version="0.6.4"; sha256="1gsjr49dr70mhbx8znql85sp08m9cabik13gs8kg0hb0zm9hmr11"; depends=[assertthat base64enc broom config DBI dbplyr digest dplyr httr jsonlite lazyeval openssl rappdirs readr rlang rprojroot rstudioapi shiny withr xml2]; };
+  sparklyr = derive2 { name="sparklyr"; version="0.7.0"; sha256="0lyn5xlz7a826dmlihn6jp2kq72abr3jy0ylsa4lvk9sj3acy988"; depends=[assertthat base64enc broom config DBI dbplyr digest dplyr httr jsonlite lazyeval openssl rappdirs readr rlang rprojroot rstudioapi shiny withr xml2]; };
   sparktex = derive2 { name="sparktex"; version="0.1"; sha256="0r6jnn9fj166pdhnjbsaqmfmnkq0qr1cjprihlnln9jad05mrkjx"; depends=[]; };
   sparkwarc = derive2 { name="sparkwarc"; version="0.1.1"; sha256="07b66f12fz19042kj7d9p32j9sy3103zvil36xkf21hm9iyg6xph"; depends=[DBI sparklyr]; };
   sparr = derive2 { name="sparr"; version="2.1-14"; sha256="1zj94csfb59sk1klc6j34sfj5a9khm62qbpk33jwlkb9slvm5fcx"; depends=[doParallel foreach misc3d spatstat spatstat_utils]; };
   sparseBC = derive2 { name="sparseBC"; version="1.1"; sha256="1w60n2875n809lbrn0hd4kdmsyfd64aikgzxchza8b59x77l0psy"; depends=[fields glasso]; };
+  sparseEigen = derive2 { name="sparseEigen"; version="0.1.0"; sha256="0vqcy61rarmp3liz8fr3vs3y40hkb3wfw89b5xsj1byaiap4772s"; depends=[]; };
   sparseFLMM = derive2 { name="sparseFLMM"; version="0.2.0"; sha256="0r7080d2s5vrcwi4h11iiapmdl0l59kd0j8r1avmw9x0d0qw6lh8"; depends=[data_table MASS Matrix mgcv refund]; };
   sparseHessianFD = derive2 { name="sparseHessianFD"; version="0.3.3.2"; sha256="0475zyij6h19diaalnkj39j4n0lx6mgfq3sl479mlngf9fhr9zvx"; depends=[Matrix Rcpp RcppEigen]; };
   sparseLDA = derive2 { name="sparseLDA"; version="0.1-9"; sha256="1k3sw9kc40yxnfss4vrsx34qxmv8ssddyhbfjhxrdldvblhbwchb"; depends=[elasticnet MASS mda]; };
@@ -10795,24 +11012,24 @@ in with self; {
   sparsebn = derive2 { name="sparsebn"; version="0.0.5"; sha256="19315nzj9pz98498amlhas6ii3vwvn3qxz5a6136nh2xfwfg2bhc"; depends=[ccdrAlgorithm discretecdAlgorithm sparsebnUtils]; };
   sparsebnUtils = derive2 { name="sparsebnUtils"; version="0.0.5"; sha256="0hdzrp2wcjl849v7np7ybmyp15zjfqr8gkwhij2qjrpprf7z8s57"; depends=[Matrix nnet]; };
   sparsediscrim = derive2 { name="sparsediscrim"; version="0.2.4"; sha256="1sa3yssncbpx8yid5wrnxdq7jl3hy5rskyh60v5x592ijcb2mif0"; depends=[bdsmatrix corpcor dplyr ggplot2 mvtnorm]; };
-  sparsenet = derive2 { name="sparsenet"; version="1.2"; sha256="106a2q4syrcnmicrx92gnbsf2i5ml7pidwghrpl6926glj59j248"; depends=[glmnet shape]; };
+  sparseinv = derive2 { name="sparseinv"; version="0.1.1"; sha256="1c0vkfq4kh78rs8x484jyi29rcswq9slljxvvc7km6qlz1mnrzlm"; depends=[Matrix spam]; };
   sparsepp = derive2 { name="sparsepp"; version="0.2.0"; sha256="0ibadyv7lchxw3y1dspjnbhc4pin4dxwqj9rdrdxfbvlx0i3jgxr"; depends=[]; };
   sparsereg = derive2 { name="sparsereg"; version="1.2"; sha256="1ipsang2fppmjx4h5ljgzx3c44z3lggc376ghrqqgmxb5ql8bcp3"; depends=[coda ggplot2 GIGrvg glmnet gridExtra MASS MCMCpack msm Rcpp RcppArmadillo VGAM]; };
   sparsestep = derive2 { name="sparsestep"; version="1.0.0"; sha256="0f3wrwiyn990sn3x9r50zgs8cr76nmyisdc7qismgx1nn5yx5z0g"; depends=[Matrix]; };
-  sparsesvd = derive2 { name="sparsesvd"; version="0.1-1"; sha256="09qpky8vxkpycj6c4vn3nqlidhblgksh3n6w8sww4yhn0pm3rzn5"; depends=[Matrix]; };
+  sparsesvd = derive2 { name="sparsesvd"; version="0.1-4"; sha256="1yf373552wvdnd65r7hfcqa3v29dqn7jd4cn431mqd2acnqjrsam"; depends=[Matrix]; };
   sparsevar = derive2 { name="sparsevar"; version="0.0.10"; sha256="069r0kbypmx7pw3z2v9l17qidw3d73rzf5zs6yn1adyvpsddjxi8"; depends=[doParallel flare ggplot2 glmnet Matrix mvtnorm ncvreg picasso reshape2]; };
   sparsio = derive2 { name="sparsio"; version="1.0.0"; sha256="12nbydgzl3qlanlsfdy8bvg6rxa439lv0z0vbyqssqwky3mmg5c3"; depends=[Matrix Rcpp]; };
   spartan = derive2 { name="spartan"; version="3.0.0"; sha256="1q78l04nbrllrsk14haln5s829rkkhkhmb34xzfgyd8glbi7z4ay"; depends=[e1071 ggplot2 gplots lhs mco mlegp neuralnet plotrix psych randomForest XML]; };
   spass = derive2 { name="spass"; version="1.1"; sha256="1kr2ixyvsm82h2brdm51bzll69632mkj9f88a2ny0pcyqrbggg83"; depends=[geepack MASS multcomp mvtnorm Rcpp]; };
   spatcounts = derive2 { name="spatcounts"; version="1.1"; sha256="0rp8054aiwc62r1m3l4v5dh3cavbs5h2yb01453bw9rwis1pj2qm"; depends=[]; };
   spate = derive2 { name="spate"; version="1.5"; sha256="1hlh4iwx1lrl8r2gag33z2xdv6k4hg86ch4f0jlqnqkhm9hapshf"; depends=[mvtnorm truncnorm]; };
-  spatgraphs = derive2 { name="spatgraphs"; version="3.1-3"; sha256="0lbxc4zj7yamcr8jak51a2alcjqlk7sca8p3z3ysp3a8f3srqwkj"; depends=[Matrix Rcpp]; };
+  spatgraphs = derive2 { name="spatgraphs"; version="3.2-1"; sha256="0n7f3r4ahv1w5mwx5mnib3g4263kz73rh1fcfk5wb12y52x8n1iz"; depends=[Matrix Rcpp]; };
   spatial = derive2 { name="spatial"; version="7.3-11"; sha256="04aw8j533sn63ybyrf4hyhrqm4058vfcb7yhjy07kq92mk94hi32"; depends=[]; };
   spatial_gev_bma = derive2 { name="spatial.gev.bma"; version="1.0"; sha256="1rjn0gsbgiv69brhnm0zj25ya3nyfh4yf6jizng85mvss3viv3hj"; depends=[coda msm SpatialExtremes]; };
   spatial_tools = derive2 { name="spatial.tools"; version="1.4.8"; sha256="0qnsjfx974na87p3n7sp711sc13v6dmpvb2kjpvscixs8rsy03y1"; depends=[abind doParallel foreach iterators mmap raster rgdal]; };
   spatialClust = derive2 { name="spatialClust"; version="1.1.1"; sha256="042yrmh1rb0hxynxlbdpcissgy9zazs5aqx7vj388ibynzijck3r"; depends=[ggplot2 maptools rgeos sp]; };
   spatialCovariance = derive2 { name="spatialCovariance"; version="0.6-9"; sha256="1m86s9a059spp97y37dcirrgjshcqzpdj11cq92vji624w4nrhlb"; depends=[]; };
-  spatialEco = derive2 { name="spatialEco"; version="0.1-7"; sha256="0l8nshsapbgfzli1rpls3j3s8gyqy2nzsgqf2x4v1r699r419i5k"; depends=[cluster MASS RANN raster RCurl rgdal rgeos rms SDMTools sp SpatialPack spatstat spdep yaImpute]; };
+  spatialEco = derive2 { name="spatialEco"; version="1.0-0"; sha256="0q65gcrbd62bbxlqr7338jm9ra6iq1b5gccb221w98860d2wjz9x"; depends=[cluster MASS RANN raster RCurl readr rgdal rgeos rms SDMTools sp SpatialPack spatstat spdep yaImpute]; };
   spatialTailDep = derive2 { name="spatialTailDep"; version="1.0.2"; sha256="107yldc43pgbadxdisnc7vq8vyvcps1b1isyvxd0kyf59xldiq47"; depends=[cubature mvtnorm SpatialExtremes]; };
   spatialfil = derive2 { name="spatialfil"; version="0.15"; sha256="01fbn9zblz7rjsgqy3ikdqpf0p0idvb6m96mf7m7qi2ps5f48vzj"; depends=[abind fields]; };
   spatialkernel = derive2 { name="spatialkernel"; version="0.4-23"; sha256="0kvhirh7afk2gfy21pa6117yk6kzbaf2dxfkr1ax3b554rnrv4p0"; depends=[spatstat]; };
@@ -10820,16 +11037,16 @@ in with self; {
   spatialprobit = derive2 { name="spatialprobit"; version="0.9-11"; sha256="1cpxxylc0pm7h9m83m2cklrh4jni5x79r5m5gibxi6viahwxn9kc"; depends=[Matrix mvtnorm spdep tmvtnorm]; };
   spatialsegregation = derive2 { name="spatialsegregation"; version="2.44"; sha256="02s75q6ylzm6xzr1q23fhps3svlb0ix86dzgr23wf42369gs7h0g"; depends=[spatstat]; };
   spatialwarnings = derive2 { name="spatialwarnings"; version="1.0"; sha256="1j8zr9pv769ji9ynzrhah3nd56mjjap450c28g26ff00l3kr9l03"; depends=[ggplot2 moments plyr poweRlaw Rcpp RcppArmadillo reshape2 tidyr VGAM]; };
-  spatstat = derive2 { name="spatstat"; version="1.54-0"; sha256="1v9zmi6z2x4yzxmnpn0nbxxfxmzp0d6fjyd3wbl3jzads5bq8q2l"; depends=[abind deldir goftest Matrix mgcv nlme polyclip rpart spatstat_data spatstat_utils tensor]; };
+  spatstat = derive2 { name="spatstat"; version="1.55-0"; sha256="05mpw0zdw4mdlkcf8q9h0nmviq37ihwpgl472wyxqw69l93vk4k3"; depends=[abind deldir goftest Matrix mgcv nlme polyclip rpart spatstat_data spatstat_utils tensor]; };
   spatstat_data = derive2 { name="spatstat.data"; version="1.2-0"; sha256="0nzw5y1in36mib5g4v076b9jii71jjidxajn3n8v67lvl48dmwgm"; depends=[spatstat_utils]; };
-  spatstat_local = derive2 { name="spatstat.local"; version="3.5-6"; sha256="0yb3k2szk2z61h2scyj4h78y13qvbd9b1hvwp9n2983w77y0k5dz"; depends=[spatstat spatstat_utils tensor]; };
+  spatstat_local = derive2 { name="spatstat.local"; version="3.5-7"; sha256="1sdcx4qxv0z5q97rljn34mssbs4w6qbqxhn71xmkns01xypl1wr2"; depends=[spatstat spatstat_utils tensor]; };
   spatstat_utils = derive2 { name="spatstat.utils"; version="1.8-0"; sha256="053j67mrnjcw1mdbm3qjvf67hrfnhsma4770r7l67bs4xys2qhfg"; depends=[]; };
   spatsurv = derive2 { name="spatsurv"; version="1.1"; sha256="0fakhz2qc5vb7ym2ik7hilv8g5fn3z7s16hzngq1n591xza5b74g"; depends=[fields geostatsp iterators lubridate Matrix OpenStreetMap RandomFields raster RColorBrewer rgeos rgl sp spatstat stringr survival]; };
   spbabel = derive2 { name="spbabel"; version="0.4.8"; sha256="1f0lradf7a3fjkdhbviw24awpqj1pzw1wfvigrqhnmf0jjw3nng3"; depends=[dplyr sp tibble]; };
   spc = derive2 { name="spc"; version="0.5.4"; sha256="1ii848jcpsg5jij1i17flhz4v5vgsb8j6iijgpha7sigmj7gynk3"; depends=[]; };
   spc4sts = derive2 { name="spc4sts"; version="0.2.1"; sha256="1mwgqj9gph3fzvmqp03khi541g13ljx8xn09ji9qcjl6j032rk2p"; depends=[gridExtra rpart]; };
   spcadjust = derive2 { name="spcadjust"; version="1.1"; sha256="016i3zaaq800x4niz4fixa57nfj1m10sz5xskff4vq4v9fjn2sl0"; depends=[]; };
-  spcosa = derive2 { name="spcosa"; version="0.3-6"; sha256="0zj5yr0by1pbixs4z6w3c6yr1k55k5gqmvjkwiq2gsgq00vs7q94"; depends=[ggplot2 rJava sp]; };
+  spcosa = derive2 { name="spcosa"; version="0.3-7"; sha256="11q6zr4y0hv1vnhl45g38f1906pq9a695ynn6yfkzlpz1kbf2jma"; depends=[ggplot2 rJava sp]; };
   spcov = derive2 { name="spcov"; version="1.01"; sha256="1brmy64wbk56bwz9va7mc86a0ajbfy09qpjafyq2jv7gm7a35ph5"; depends=[]; };
   spcr = derive2 { name="spcr"; version="2.0"; sha256="1n0lva9brpzxysw6p7l88cj8d46jng2zd7zvr5brqldzd3yl63l9"; depends=[]; };
   spd = derive2 { name="spd"; version="2.0-1"; sha256="00zxh4ri47b61jkcjf5idl9hhlfld6rhczsnhmjsax59884f2i8m"; depends=[KernSmooth]; };
@@ -10844,16 +11061,17 @@ in with self; {
   speccalt = derive2 { name="speccalt"; version="0.1.1"; sha256="0j7rbidmmx78vgwsqvqjbjjh92fnkf2sdx0q79xlpjl2dph7d6l6"; depends=[]; };
   speciesgeocodeR = derive2 { name="speciesgeocodeR"; version="1.0-4"; sha256="033877l9sxcvvzpyf9aw19sj8qfscim663j2y2az8bl9c79xw4ph"; depends=[maps raster sp]; };
   specificity = derive2 { name="specificity"; version="0.1.1"; sha256="1gvlyx9crkzm3yyp1ln5j9czcg83k7grm6ijabhl919gjjr1p60n"; depends=[car]; };
-  specmine = derive2 { name="specmine"; version="1.0"; sha256="1dd8ymyq3894br2fv54r1z93aifh2iiz94a3r4xj1qq07005hr29"; depends=[baseline caret ChemoSpec compare ellipse genefilter GGally ggdendro ggplot2 hyperSpec impute MAIT MASS Metrics pcaPP pls qdap RColorBrewer rgl scatterplot3d xcms]; };
+  specklestar = derive2 { name="specklestar"; version="0.0.1.7"; sha256="04vm989yi31vqnf5rs6cdyikm4jzfd9njxh0ls3dvjrg19ipsnmn"; depends=[Rcpp]; };
+  spectacles = derive2 { name="spectacles"; version="0.5-0"; sha256="0i1kzp0fpljcvkws15w3iwgpjig2llhlrfs5blk562kgb7vwshqm"; depends=[baseline epiR ggplot2 plyr reshape2 signal stringr]; };
   spectral = derive2 { name="spectral"; version="1.0.1"; sha256="0mawgxz1gbzgb3lxm6gfbv3wan0ykziprqym8ajvdjsdq4fwkk2m"; depends=[rasterImage Rcpp]; };
   spectral_methods = derive2 { name="spectral.methods"; version="0.7.2.133"; sha256="0k8kpk94d2qzqdk3fnf6h9jmwdyp8h3klr0ilm5siwq5wkcz339l"; depends=[abind DistributionUtils foreach JBTools ncdf_tools nnet raster RColorBrewer RNetCDF Rssa]; };
   spectralGP = derive2 { name="spectralGP"; version="1.3.3"; sha256="1jf09nsil4r90vdj7n1k6ma9dzzx3bwv0fa7svil9pxrd2zlbkbs"; depends=[]; };
-  spectrolab = derive2 { name="spectrolab"; version="0.0.3"; sha256="0ki6z6ns2q698if58xhhsa5zlvmrgiprzyn2ass06lpjwza1inj4"; depends=[devtools prospectr RColorBrewer shiny shinyjs]; };
+  spectrolab = derive2 { name="spectrolab"; version="0.0.4"; sha256="1vmrpszjwl9iq8z6p8rhh560l79iya6rah7jld8ykvm9irwdf15h"; depends=[devtools prospectr RColorBrewer shiny shinyjs]; };
   speedglm = derive2 { name="speedglm"; version="0.3-2"; sha256="1b25zimk0z7ad62yacqdg0zk0qs0jja4i918ym942xfw4j1z3jjz"; depends=[MASS Matrix]; };
-  spef = derive2 { name="spef"; version="1.0-5"; sha256="0hbb2vmgx5x135kvb5c525q78m8ccpv4j6hv16v31zka2fjwcj8z"; depends=[BB ggplot2 nleqslv plyr sm SQUAREM survival]; };
+  spef = derive2 { name="spef"; version="1.0-6"; sha256="1an9p914p457bm4wl82bpqa8jq9ibyrrc1jnm5ppr5ww5qp6yifq"; depends=[BB ggplot2 nleqslv plyr sm SQUAREM survival]; };
   speff2trial = derive2 { name="speff2trial"; version="1.0.4"; sha256="0dj5mh2sdp6j4ijgv14hjr39rasab8g83lx1d9y50av11yhbf2pw"; depends=[leaps survival]; };
   spellcheckr = derive2 { name="spellcheckr"; version="0.1.2"; sha256="09snc1ymzr4njnr3w502b84dqwjjd414higjxqi48jvh27br5k1l"; depends=[data_table dplyr stringr]; };
-  spelling = derive2 { name="spelling"; version="1.0"; sha256="0r293l451b0fxs6yf5ygak6s9m3alsc1cnpwhzf091blhi76s2jr"; depends=[commonmark hunspell knitr xml2]; };
+  spelling = derive2 { name="spelling"; version="1.1"; sha256="10zhzbpyjw5lkg4iyjwgs5xp2c8bgwyzjg146fcml6cjs6xhl8ni"; depends=[commonmark hunspell knitr xml2]; };
   sperich = derive2 { name="sperich"; version="1.5-7"; sha256="1apgq5nsl6nw674dy7bc7r7z962wcmqsia5n67a8n6c5lcgcif3f"; depends=[foreach rgdal SDMTools sp]; };
   sperrorest = derive2 { name="sperrorest"; version="2.1.1"; sha256="0rbfr6dg8dx6lm3npsrinr2vxxsq0f3xwprzl0fyzabdhd82na4y"; depends=[doFuture foreach future gdata magrittr pbapply pbmcapply purrr ROCR rpart stringr]; };
   spew = derive2 { name="spew"; version="1.3.0"; sha256="09g8j5v5k455c3kqm1fn09ql3x34xy22igicakwl99s8gsln7v3p"; depends=[maptools plyr sp]; };
@@ -10866,16 +11084,17 @@ in with self; {
   sphereplot = derive2 { name="sphereplot"; version="1.5"; sha256="1i1p20h95cgw5wqp9bwfs9nygm4dxzsggz08ncjs1xrsvhhq9air"; depends=[rgl]; };
   sphet = derive2 { name="sphet"; version="1.6"; sha256="0149wkak7lp2hj69d83rn05fzh9bsvyc1kyg0d3b69sx92kqlwr0"; depends=[Matrix nlme sp spdep]; };
   spi = derive2 { name="spi"; version="1.1"; sha256="0gc504f7sji5x0kmsidnwfm7l5g4b1asl3jkn2jzsf2nvjnplx1z"; depends=[]; };
+  spider = derive2 { name="spider"; version="1.5.0"; sha256="1y034v42jxjl3vj87iz5kaizq7fwppmn56z7yyvrrmk5ps4nqr1j"; depends=[ape pegas]; };
   spiderbar = derive2 { name="spiderbar"; version="0.2.1"; sha256="1mm9g58riyjxpfwjj28shlw9zlycsgcxl6xw8im0gm815v2plyhv"; depends=[Rcpp]; };
   spiders = derive2 { name="spiders"; version="1.2"; sha256="1qklm178bgkgpvrjf024jphsdh9can8300sf0702l4h0rk2daqbq"; depends=[plyr]; };
   spikeSlabGAM = derive2 { name="spikeSlabGAM"; version="1.1-11"; sha256="1f16jvdj6kbiiypnbbj10nj7l88kkrxasrribqpjv7ai62dlximn"; depends=[akima cluster coda ggplot2 gridExtra MASS MCMCpack mvtnorm R2WinBUGS reshape scales]; };
   spikes = derive2 { name="spikes"; version="1.1"; sha256="080sna0sgii61kai5sirs6cijnvk1012djwfw705di9y2lvk1hqk"; depends=[emdbook]; };
   spikeslab = derive2 { name="spikeslab"; version="1.1.5"; sha256="0dzkipbrpwki6fyk4hqlql3yhadwmclgbrx00bxahrmlaz1vjzh2"; depends=[lars randomForest]; };
-  spind = derive2 { name="spind"; version="2.1.1"; sha256="0d0pjjipnn1jkdi70npfqssz7m72h68dshg7gzpch8ycq8iqz9sz"; depends=[gee geepack ggplot2 lattice MASS RColorBrewer rje sp splancs stringr waveslim]; };
+  spind = derive2 { name="spind"; version="2.1.2"; sha256="0z00fc9r6aycv5v9ms7v64xszfc58wvy6y7bd2z0xima1gpppq2r"; depends=[gee geepack ggplot2 lattice MASS RColorBrewer rje splancs stringr waveslim]; };
   spinyReg = derive2 { name="spinyReg"; version="0.1-0"; sha256="0kbg7rncrrl5xdsaw9vj909x97mfp77mjnvghczplmnwmmanyn72"; depends=[]; };
   splancs = derive2 { name="splancs"; version="2.01-40"; sha256="0qs3lwyllrkahnvqbm8bzrf03bm9zk4s7p1n19s638y4xf0l6x3r"; depends=[sp]; };
-  splashr = derive2 { name="splashr"; version="0.4.0"; sha256="0k6ylq4vrs4ymr8cjvwm4id1kkng76hlg4bzxak4sd9sjk914xp2"; depends=[clipr curl docker formatR HARtools httr jsonlite lubridate magick openssl purrr scales stringi xml2]; };
-  splines2 = derive2 { name="splines2"; version="0.2.6"; sha256="1a58pl1a0lc7ljs9q9p3licpzzfr75lcahfzc3hdzhg3zn6m56cx"; depends=[]; };
+  splashr = derive2 { name="splashr"; version="0.4.1"; sha256="1gydnl6qdkqxvgzy3j6n8y4nan4wz6p7wybcgnm5p37n7q6m2rhk"; depends=[curl docker formatR HARtools httr jsonlite lubridate magick openssl purrr scales stringi xml2]; };
+  splines2 = derive2 { name="splines2"; version="0.2.7"; sha256="1hh7zd2gqmfc5xx91kjwi465yvq6lwrhgjdim1b40g6canh0ixlb"; depends=[]; };
   splitfngr = derive2 { name="splitfngr"; version="0.1.1"; sha256="0gz65acnkil9xjspl2kzpzyhj7lslga9g3p0k79xh25ia6qal5ws"; depends=[lbfgs]; };
   splithalf = derive2 { name="splithalf"; version="0.2.0"; sha256="1bpw8mw88aryk4n0bdm4f356wsix6npdpl91qfbwayhdh0g5302f"; depends=[plyr]; };
   splitstackshape = derive2 { name="splitstackshape"; version="1.4.2"; sha256="0m9karfh0pcy0jj3dzq87vybxv9gmcrq5m2k7byxpki95apbrsmg"; depends=[data_table]; };
@@ -10886,7 +11105,7 @@ in with self; {
   splusTimeDate = derive2 { name="splusTimeDate"; version="2.5.0-137"; sha256="0bpzv6a05hnqnnz2znnkb3f34r56krhc595zjnn82azxj4a53njh"; depends=[]; };
   splusTimeSeries = derive2 { name="splusTimeSeries"; version="1.5.0-74"; sha256="0aikw6ckc0a7lrgjlcdmqspgrx0fc4iysd7jynd2lsf1hxy4pz35"; depends=[splusTimeDate]; };
   spm = derive2 { name="spm"; version="1.0.0"; sha256="0q87sbp39axmlnj15srnsysm7d9rpm5q6zic0h6hc1xwp205v0sf"; depends=[gbm gstat psy randomForest sp]; };
-  spm12r = derive2 { name="spm12r"; version="2.3.1"; sha256="1fkm961phkxy5rmv2vav0a7vy9j89i0gwgfi2rjg682xl473j3gk"; depends=[git2r matlabr neurobase oro_nifti R_utils]; };
+  spm12r = derive2 { name="spm12r"; version="2.7.4"; sha256="0v0zmsbzk6446n1yipz3w99n0n4yya6idff3gfyj7fgq10pcalgz"; depends=[git2r matlabr neurobase oro_nifti R_utils]; };
   spmoran = derive2 { name="spmoran"; version="0.1.2"; sha256="19rl14w0zry649c3kgvrmb7bsw3dxsprf52naiqfxxs7qy3pxcm2"; depends=[doParallel fields foreach ggplot2 Matrix vegan]; };
   spnet = derive2 { name="spnet"; version="0.9.1-0"; sha256="1fy0fpgz2k985brfqyza1l49y0w2j9z308n542pgmkzqsnsdscpw"; depends=[shape sp]; };
   spocc = derive2 { name="spocc"; version="0.7.0"; sha256="0ar107c7snbh1iaib3xddng88861h3gc56whicx5krl3zf2xgjqa"; depends=[crul data_table jsonlite lubridate rbison rebird rgbif ridigbio rvertnet tibble whisker wicket]; };
@@ -10896,7 +11115,6 @@ in with self; {
   sppmix = derive2 { name="sppmix"; version="1.0.2"; sha256="1924lrxjlijlbvjbkkwb3pfa4klg49ph6hz66b7kyy1371wa2b9y"; depends=[fields ggplot2 mvtnorm Rcpp RcppArmadillo rgl spatstat]; };
   spray = derive2 { name="spray"; version="1.0-3"; sha256="0zy2dwzk33cwch0pdhhsyiy169z39iij3zvvjg81gxa29pq0h1ab"; depends=[magic partitions Rcpp]; };
   sprex = derive2 { name="sprex"; version="1.4.1"; sha256="14idml4mipd4wyza7hqf49ww4dparmwaps35hxm8jg5h0w1pgh7j"; depends=[swfscMisc]; };
-  sprint = derive2 { name="sprint"; version="1.0.7"; sha256="1yzx1qjpxx9yc0hbm1mmha5b7aq13iflq66af597b7yj6abm7zjp"; depends=[boot e1071 ff randomForest rlecuyer]; };
   sprinter = derive2 { name="sprinter"; version="1.1.0"; sha256="12v4l4fxijh2d46yzs0w4235a8raip5rfbxskl0dw7701ryh7n8g"; depends=[CoxBoost GAMBoost LogicReg randomForestSRC survival]; };
   sprm = derive2 { name="sprm"; version="1.2.2"; sha256="0iyijkjnyz4yx2cmazlnhkk0f5ls0c2q2aikwlzl13w6zbj040a8"; depends=[cvTools ggplot2 pcaPP reshape2 robustbase]; };
   sprsmdl = derive2 { name="sprsmdl"; version="0.1-0"; sha256="09klwsjp5w6p7dkn5ddmqp7m9a3zcmpr9vhcf00ynwyp1w7d26gi"; depends=[]; };
@@ -10906,7 +11124,7 @@ in with self; {
   spsurvey = derive2 { name="spsurvey"; version="3.3"; sha256="1xpjimqkrwm77amqza4713psmg86bvz08gxdi35advq4w614f2w1"; depends=[deldir foreign Hmisc MASS rgeos sp]; };
   spt = derive2 { name="spt"; version="1.13-8-8"; sha256="18s74pxfmsjaj92z2a34nq90caf61s84c616yv33a0xvfvp32qr5"; depends=[]; };
   sptemExp = derive2 { name="sptemExp"; version="0.1.1"; sha256="0a4y355j24sll8jmm17lh4j13k21b3nlalsxzpzx2gp5xw1x7jr6"; depends=[automap BayesX BayesXsrc bcv deldir doParallel foreach limSolve ncdf4 plyr R2BayesX raster Rcpp RcppEigen rgdal rgeos sp SpatioTemporal]; };
-  sptm = derive2 { name="sptm"; version="16.7-9"; sha256="0x8824zccrwdl38jbhq8skzcvxb7a3b1zggkd7gmyjd94xvxll9k"; depends=[kyotil survey survival]; };
+  sptm = derive2 { name="sptm"; version="17.12-7"; sha256="1l5in0jkqg44rr2id3h25jrfbn7x855p31z338hnmdpfwkpm2b1a"; depends=[kyotil survey survival]; };
   spuRs = derive2 { name="spuRs"; version="2.0.0"; sha256="0lbc3nny6idijdaxrxfkfrn40bxfyp9z3yl9mwb1k6cyd10v5mfj"; depends=[lattice MASS]; };
   spup = derive2 { name="spup"; version="0.1-1"; sha256="0iwmydvd6bwpyr4q3hk2hlvgrvpzrdhnbq0frxadwcaaap75pfv0"; depends=[gstat magrittr mvtnorm purrr raster whisker]; };
   sqldf = derive2 { name="sqldf"; version="0.4-11"; sha256="0q12vsb53p2wchgp8wfz5bk08wfnm0jxjrakclj4jyy6x3a7ksff"; depends=[chron DBI gsubfn proto RSQLite]; };
@@ -10916,7 +11134,8 @@ in with self; {
   squash = derive2 { name="squash"; version="1.0.8"; sha256="1x1rw0ny2kas0x8y5vv9czyqmwml7s5d2c8a33vqap0x8q52r4z6"; depends=[]; };
   squid = derive2 { name="squid"; version="0.1.1"; sha256="0qv9lazgiqazhq096ybmllalm2l2h794ry4p1r93c10msxg37sdp"; depends=[arm data_table ggplot2 lme4 MASS shiny]; };
   sra = derive2 { name="sra"; version="0.1.1"; sha256="03nqjcydl58ld0wq1f9f5p666qnvdfxb5vhd584sdilw1b730ykd"; depends=[]; };
-  srvyr = derive2 { name="srvyr"; version="0.2.2"; sha256="0k8s96hldv9jya6v0l6xls3cxr7mzxk0nqjhwizsqbqb773x95j7"; depends=[dplyr lazyeval magrittr survey tibble]; };
+  srp = derive2 { name="srp"; version="1.0.0"; sha256="10mpyy8q419dw0zd96l0z8lkxpcyn1l5fvnyvr3n0lyl6jmf91sy"; depends=[fda mgcv]; };
+  srvyr = derive2 { name="srvyr"; version="0.3.0"; sha256="1xxkrr15ihybgr2kv93p1plf6g8bpc2d227bwskxqx9pg7ga3cxf"; depends=[dplyr magrittr rlang survey tibble]; };
   ss3sim = derive2 { name="ss3sim"; version="0.9.5"; sha256="0rdb49bfxvyh0jrqycrv1hxvh7y4kvw81jccjg5ma734x44q0vm5"; depends=[bbmle dplyr foreach ggplot2 gtools lubridate magrittr plyr r4ss]; };
   ssa = derive2 { name="ssa"; version="1.2.1"; sha256="10x58c57pa9x6svm4h4xrss72ikin9lpf3ihjwmnkgnaicvsd0bx"; depends=[iterators]; };
   ssanv = derive2 { name="ssanv"; version="1.1"; sha256="17a4a5azxm5h2vxia16frcwdyd36phpfm7fi40q6mnnrwbpkzsjd"; depends=[]; };
@@ -10934,29 +11153,31 @@ in with self; {
   ssmsn = derive2 { name="ssmsn"; version="0.2.0"; sha256="0fzqdkqhj5hh8pzcwh7i0rglgdq22a5mriyis8r1vhlkdc7n5m39"; depends=[MCMCpack]; };
   sspline = derive2 { name="sspline"; version="0.1-6"; sha256="0d6ms8szyn39c7v0397d5ar2hrl8v1l2b7m8hlj37hgp70b9s55h"; depends=[]; };
   sspse = derive2 { name="sspse"; version="0.5-5"; sha256="07656miqrv9g5nn3ahyfj7wb010cwkr3qjhysbsih0p43dwczq0y"; depends=[coda]; };
+  ssrm_logmer = derive2 { name="ssrm.logmer"; version="0.1"; sha256="1i9rrsixl3swd04w1gf9gf1r2wb9nkvwhc8ld4bx4zxzm1031f67"; depends=[sfsmisc statmod]; };
   sss = derive2 { name="sss"; version="0.1-0"; sha256="1qg56g60h8c52l8lpxihxsdgnqkxiag1mzh3p388r9hhff7g3g0k"; depends=[assertthat xml2]; };
   ssvd = derive2 { name="ssvd"; version="1.0"; sha256="1fdpr38qi59ijrz16jixn6ii1hvmxfjirjqfcp7dxrqz9nx8x0sk"; depends=[]; };
   ssym = derive2 { name="ssym"; version="1.5.7"; sha256="0l5d921vlhd4qwddllrgcxpq3bhivvy5ikh3ixdy3s140rzpgwrv"; depends=[Formula GIGrvg normalp numDeriv sandwich survival]; };
   st = derive2 { name="st"; version="1.2.5"; sha256="0dnyfjcz37gjjv87nrabb11gw2dlkqhq3mrxdpkzahx0w0g0q0pb"; depends=[corpcor fdrtool sda]; };
   stR = derive2 { name="stR"; version="0.3"; sha256="0zad25s9wp4lapkww3rdbqsd4y7p8xhz9is7avq400srxakinx7n"; depends=[foreach forecast Matrix quantreg rgl SparseM]; };
   staTools = derive2 { name="staTools"; version="0.1.0"; sha256="1ksr0sjkhlwh0fkwcxjcxzbyxs1g78m4spkhrmgdpfzmk5zskqf9"; depends=[magicaxis Rcpp VGAM]; };
+  stability = derive2 { name="stability"; version="0.1.0"; sha256="1hknyxzl376pvjvmbbv5fszqq2xrg154c3y5j9hy31a9402yb8xi"; depends=[dplyr lme4 magrittr matrixStats reshape2]; };
   stable = derive2 { name="stable"; version="1.1.2"; sha256="11irpn0qfblzskdr71991jlmdrbqqqpszppn5pii3lr5hflqqr1d"; depends=[rmutil]; };
   stabledist = derive2 { name="stabledist"; version="0.7-1"; sha256="0scar396wiq6wkbkvwp4qrxqc1m075y56p37i6iry5rw796p1i86"; depends=[]; };
   stablespec = derive2 { name="stablespec"; version="0.3.0"; sha256="0m143cq0baj2lyakhr31mqk2lg78jzpdlpv2bhwz6bzzip7mqi22"; depends=[foreach ggm graph matrixcalc nsga2R polycor Rgraphviz sem]; };
   stabs = derive2 { name="stabs"; version="0.6-3"; sha256="17sa0sjxf6h7gx1ga1pxhv17yrz3qisaivbf5cbc3asvshhswqg9"; depends=[]; };
   stackoverflow = derive2 { name="stackoverflow"; version="0.1.2"; sha256="1psw96iscgsx11drmcnh0yjg2jjcaa4akmywh337i6gbgam8kj61"; depends=[]; };
-  stacomiR = derive2 { name="stacomiR"; version="0.5.3"; sha256="0jlpg2i304xzfg418x5x9kwm2iawp2jc0q5iahmmy0kiz7283zjr"; depends=[dplyr ggplot2 gWidgets gWidgetsRGtk2 Hmisc intervals lattice lubridate magrittr mgcv RColorBrewer reshape2 RGtk2 RODBC RPostgreSQL sqldf stacomirtools stringr xtable]; };
+  stacomiR = derive2 { name="stacomiR"; version="0.5.3.1"; sha256="1d05k8s8239d615vqjs6r6rx7r3vqc5gmms8iqds6lhr59bxv83g"; depends=[dplyr ggplot2 gWidgets gWidgetsRGtk2 Hmisc intervals lattice lubridate magrittr mgcv RColorBrewer reshape2 RGtk2 RODBC RPostgreSQL sqldf stacomirtools stringr xtable]; };
   stacomirtools = derive2 { name="stacomirtools"; version="0.5.2"; sha256="1a33yy594699b05lb32zwx6yhmvxzwly6vvf8xzqg6lac64p26r5"; depends=[RODBC xtable]; };
   stagePop = derive2 { name="stagePop"; version="1.1-1"; sha256="0949r5ibl3sb10sr5xsswxap3wd824riglrylk7fx43ynsv5hzpy"; depends=[deSolve PBSddesolve]; };
   stam = derive2 { name="stam"; version="0.0-1"; sha256="1x1j45fir64kffny0nssb2hwn4rcp8gd2cjv6fw4yy0l4d0xi5iv"; depends=[np sp]; };
   stampr = derive2 { name="stampr"; version="0.1"; sha256="1w7zp5n41gzahv4psdgw5a5mylcxlf12931fnjz0q2cwqj9cwql5"; depends=[deldir maptools raster rgdal rgeos sp spdep]; };
   standardize = derive2 { name="standardize"; version="0.2.1"; sha256="0ijyqy09fl478cvqnqwv7fpdmf2yvihw18abkkmgwdnm2v3xqphp"; depends=[lme4 MASS stringr]; };
-  stapler = derive2 { name="stapler"; version="0.6.3"; sha256="003khr7kg4mzk7s64m29snybkfr9z717nar7905w0q7vm8z6c06x"; depends=[matrixStats RNifti]; };
-  stargazer = derive2 { name="stargazer"; version="5.2"; sha256="0nikfkzjr44piv8hng5ak4f8d7q78f2znw2df0gy223kis8q2hsd"; depends=[]; };
+  stapler = derive2 { name="stapler"; version="0.6.5"; sha256="0xhwlm3iyxxmaaf0smj8g5zdawb51d7dc636czbvk5g551g7wfdb"; depends=[matrixStats RNifti]; };
+  stargazer = derive2 { name="stargazer"; version="5.2.1"; sha256="1nfmb8qka6qxhjagk1a9am43dgnp39fy4cjbygivzp2hlzy22f46"; depends=[]; };
   starma = derive2 { name="starma"; version="1.3"; sha256="07r0kyabhgbm2v39fcrw0qhxcxj9a9cb45g9chzcnn9qmvramcwx"; depends=[ggplot2 Rcpp RcppArmadillo scales]; };
   starmie = derive2 { name="starmie"; version="0.1.2"; sha256="06cvl8gk78c55kcf4rd27d4gfzh2lcg7ldynvx4hclvbw7ak9zdq"; depends=[combinat data_table ggdendro ggplot2 ggrepel gridExtra iterpc label_switching MCL MCMCpack proxy purrr readr stringr tidyr]; };
   startR = derive2 { name="startR"; version="0.0.1"; sha256="12y57n3yip5rz4rln41896a15zv5b4c67k164282fh1p6ww9gr3r"; depends=[abind bigmemory future]; };
-  startup = derive2 { name="startup"; version="0.8.0"; sha256="09xqypignny764n9yvgqm9zy1bqc0d088m1b0lcbdgnlrrr3h4xn"; depends=[]; };
+  startup = derive2 { name="startup"; version="0.9.0"; sha256="0cr3lp5aq93d8mk55nhfpszjkr4iv5ysm7jj7igj7yy3ag93snm0"; depends=[]; };
   startupmsg = derive2 { name="startupmsg"; version="0.9.4"; sha256="1r9dqrfznsrj7s11m56hkzgfnw3qcgzh07pqipl007zr2av9xwqw"; depends=[]; };
   statGraph = derive2 { name="statGraph"; version="0.1.0"; sha256="13wfylb92lzw08fn3p000v87abs7ij2rb82np1rkgsl8w2kica73"; depends=[igraph MASS]; };
   statar = derive2 { name="statar"; version="0.6.5"; sha256="0vmdrdq6db16vfl0rb39x8yfnbdzpcrvywfgp4lss6jby3nvjwd9"; depends=[data_table dplyr ggplot2 lazyeval matrixStats rlang stringr tidyr]; };
@@ -10966,7 +11187,6 @@ in with self; {
   statesRcontiguous = derive2 { name="statesRcontiguous"; version="0.1.0"; sha256="0yzi6ycfj4cc4q0zzzckdz65wp9m4yx6fi7kp9nssj9pj6a8xlrp"; depends=[dplyr magrittr sf]; };
   stationaRy = derive2 { name="stationaRy"; version="0.4.1"; sha256="1iyzg40vi1l4s68kh50in1p97pcb28z6n932cgrx5k1rv3api13g"; depends=[downloader dplyr leaflet lubridate plyr progress readr stringr]; };
   statip = derive2 { name="statip"; version="0.1.5"; sha256="1gyn86kg96yrs9drc23xabf4s8ii32hgjla310sy6pd7c97bwqgf"; depends=[bazar dplyr]; };
-  statisticalModeling = derive2 { name="statisticalModeling"; version="0.3.0"; sha256="018ap1hbv4m6y0c71f807apbb9bhr64kcfrn4w8ahhb2520l4mf8"; depends=[ggplot2 lazyeval magrittr mosaic rpart]; };
   statmod = derive2 { name="statmod"; version="1.4.30"; sha256="07v4x8af60alcw6vbiwf5fp25bhra61kvxz9kqx64lszm0i1fb4x"; depends=[]; };
   statnet = derive2 { name="statnet"; version="2016.9"; sha256="1j5z7awvac3sb66ma1lrc9j23m6hmzqfnqxc0znsm36h324y3y6s"; depends=[ergm ergm_count network networkDynamic sna statnet_common tergm]; };
   statnet_common = derive2 { name="statnet.common"; version="4.0.0"; sha256="0yw6l5b4qv0jqlg4zyczas7m12a5pyqghs6ydxy2f6v6vxkijvi0"; depends=[]; };
@@ -10982,7 +11202,7 @@ in with self; {
   steepness = derive2 { name="steepness"; version="0.2-2"; sha256="0bw7wm7n2xspkmj90qsjfssnig683s3qwg1ndkq2aw3f6clh4ilm"; depends=[]; };
   stellaR = derive2 { name="stellaR"; version="0.3-3"; sha256="098sz6b8pl3fyca3g6myp97nna368xhxf8krmibadnnsr49q5zs9"; depends=[]; };
   stepPenal = derive2 { name="stepPenal"; version="0.1"; sha256="09viapb4846g91jzf9364rdyd865b19v83pwcdm3p3xsjry9ffxk"; depends=[caret dfoptim glmnet mvtnorm pROC]; };
-  stepPlr = derive2 { name="stepPlr"; version="0.92"; sha256="16j32sk7ri4jdgss7vw5zz7s42rxk7rs376iyxzzpy1zcc9b64rv"; depends=[]; };
+  stepPlr = derive2 { name="stepPlr"; version="0.93"; sha256="1i54nyz8z5vq3mzfh6h2vd1q0hsdazc4mhrj9ad0zdvn0qnz61lv"; depends=[]; };
   stepR = derive2 { name="stepR"; version="2.0-1"; sha256="1r45wxw9kvzyybkl4f1r9c2d7wmi0k4ji39w3nxqrf7n5kp2cnj4"; depends=[digest R_cache Rcpp]; };
   stepp = derive2 { name="stepp"; version="3.0-11"; sha256="0jrwfvcgh3sjm3zag93kjyny2qqsyiw988vnx6jw7s31bv9g0d6s"; depends=[car survival]; };
   stepwise = derive2 { name="stepwise"; version="0.3"; sha256="1lbx1bxwkf9dw6q46w40pp7h5nkxgghmx8rkpaymm6iybc7gyir2"; depends=[]; };
@@ -10991,8 +11211,7 @@ in with self; {
   stilt = derive2 { name="stilt"; version="1.2.0"; sha256="1b9z64g1v5764h3y75xk1zkcv3imskvd44nqjp5m2dzmsw33nzji"; depends=[fields]; };
   stinepack = derive2 { name="stinepack"; version="1.3"; sha256="0kjpcjqkwndqs7cyc6w62z1nnkqmhkifz2w0bi341jh0ybmak4fq"; depends=[]; };
   stlplus = derive2 { name="stlplus"; version="0.5.1"; sha256="14728xsm982z9sg4rbqg307pbwqlsiyzj8z3sr9wr6fi0dayf6z5"; depends=[lattice Rcpp yaImpute]; };
-  stm = derive2 { name="stm"; version="1.3.0"; sha256="07q8kgw46rhj2lgfcxjz2z7b65z1syh5q94lfzp3zqd7lcbfp5yy"; depends=[data_table glmnet lda Matrix matrixStats quadprog quanteda Rcpp RcppArmadillo slam stringr]; };
-  stmBrowser = derive2 { name="stmBrowser"; version="1.0"; sha256="0jfh0c835a2sxn2cqlmwdlzj2g2dmkfl2z3pkv4fc1ajggw2n7g2"; depends=[httr jsonlite rjson stm]; };
+  stm = derive2 { name="stm"; version="1.3.3"; sha256="1b1i4r161i92f5q63zjfghzg39bw9d2rqdxx0y6zjd8n2p0ni3wv"; depends=[data_table glmnet lda Matrix matrixStats quadprog quanteda Rcpp RcppArmadillo slam stringr]; };
   stmCorrViz = derive2 { name="stmCorrViz"; version="1.3"; sha256="1a4pckrbzsihyf1bqvw3cl0hxrc4yq1pnkgxgf4b8jday6zkxwcv"; depends=[jsonlite SnowballC stm tm]; };
   stmgp = derive2 { name="stmgp"; version="1.0"; sha256="1v6ahg4icyrz8p0lfiyi2x90allhjvcq8rycinas5mffg7xgpv7d"; depends=[MASS]; };
   stmgui = derive2 { name="stmgui"; version="0.1.6"; sha256="1fn2m5l7y3p1riw39g6r3hpjxdccygih7yipp7dvc4msl9fm4h5c"; depends=[markdown shiny shinyBS shinyjs shinythemes stm tm]; };
@@ -11002,14 +11221,16 @@ in with self; {
   stochvol = derive2 { name="stochvol"; version="1.3.3"; sha256="0cg61djjfw4jmq71g8kddrihdy9n2vlpzlf7kl2f3p8njc1f8kk2"; depends=[coda Rcpp RcppArmadillo]; };
   stocks = derive2 { name="stocks"; version="1.1.1"; sha256="1qwd16bw40w2ns7b0n9wm8l344r4vyk27rmg0vr5512zsrcjkcfb"; depends=[rbenchmark Rcpp]; };
   stoichcalc = derive2 { name="stoichcalc"; version="1.1-3"; sha256="0z9fnapibfp070jxg27k74fdxpgszl07xiqfj448dkydpg8ydkrb"; depends=[]; };
-  stopwords = derive2 { name="stopwords"; version="0.1.0"; sha256="15y0wak2gys78zd73p0chzqfx3zh2i9x4nff95apvrmrh2cfav8a"; depends=[]; };
+  stopwords = derive2 { name="stopwords"; version="0.9.0"; sha256="050v3hq1wd3w83zrp76nv6n67qsf5fss2cbihb6waijancm7zfzh"; depends=[ISOcodes]; };
   stormwindmodel = derive2 { name="stormwindmodel"; version="0.1.0"; sha256="1pxkb0ijx04c4bk6szxhj8lxq6x76m8pyhxpf8xq63h4gh57fxh3"; depends=[dplyr ggplot2 lubridate maps plyr stringr tidyr weathermetrics]; };
-  storr = derive2 { name="storr"; version="1.1.2"; sha256="1bv5qriqh1w8rishwxkm9xzz30ildrpcvnh4g3d8khh5r8dlz5lg"; depends=[digest R6]; };
+  storr = derive2 { name="storr"; version="1.1.3"; sha256="0rmljnlnbi5jdxbh5mzxgkq9aa3mm46kl04jlasyng8pv3prxj1v"; depends=[digest R6]; };
   stosim = derive2 { name="stosim"; version="0.0.12"; sha256="0c4sj5iirm542hx782izfdmy2m3kl5q28l10xjj0ib4xn5y6yx3c"; depends=[Rcpp tcltk2]; };
-  stplanr = derive2 { name="stplanr"; version="0.2.1"; sha256="0bf5k6irq1gwxk5vdl68bii1f8qd2gprzl8vmbnk98lccmvwna8d"; depends=[curl dplyr geosphere httr igraph jsonlite lubridate maptools nabor openxlsx R_utils raster Rcpp RcppArmadillo readr rgdal rgeos rlang sf sp stringi stringr]; };
+  stplanr = derive2 { name="stplanr"; version="0.2.2"; sha256="1yl2x73y39d4405qis22bhqb1afiwdra8h034k6y2jjgwi3l34yy"; depends=[curl dplyr geosphere httr igraph jsonlite lubridate maptools nabor openxlsx R_utils raster Rcpp RcppArmadillo readr rgdal rgeos rlang sf sp stringi stringr]; };
   stpm = derive2 { name="stpm"; version="1.6.8"; sha256="0gifkrpp8n4r31i4dfvjfq7w0l6jfid43i94ygqwwv0ca583aw4y"; depends=[mice nloptr Rcpp RcppArmadillo sas7bdat survival]; };
-  stpp = derive2 { name="stpp"; version="2.0-1"; sha256="0a4qpby9z8jcm3z7xcw71h4avqchjr867dwx1c0198hpjz8bm5kp"; depends=[ggplot2 gridExtra KernSmooth plot3D rgl rpanel spatstat splancs]; };
+  stpp = derive2 { name="stpp"; version="2.0-3"; sha256="18icnfrlrcibrpw7vqkrhzfx880ak24xk6llwgiqw18r929mq1hw"; depends=[ggplot2 gridExtra KernSmooth plot3D rgl rpanel spatstat splancs]; };
   stppResid = derive2 { name="stppResid"; version="1.1"; sha256="0hgzsyy5y0sqd4d2agdr7p2kq0w51vs8f63dvj6j49h8cvgiws2x"; depends=[cubature deldir splancs]; };
+  strandCet = derive2 { name="strandCet"; version="1.0"; sha256="019cacj0g9f6i8v03rq7qyph7f14d8n0qw0axvczijvnk99q602a"; depends=[boot corpcor MASS minpack_lm mvtnorm numDeriv]; };
+  stranger = derive2 { name="stranger"; version="0.3.2"; sha256="05s4dv9w8dxy2x63ai8vyh3rwphr4h59axjsh7lqa05ja06pai5z"; depends=[assertthat data_table dplyr ggplot2 tidyr]; };
   strap = derive2 { name="strap"; version="1.4"; sha256="0gdvx02w0dv1cq9bb2yvap00lsssklfnqw0mwsgblcy2j6fln7b0"; depends=[ape geoscale]; };
   strat = derive2 { name="strat"; version="0.1"; sha256="1axxrp750kjzcgxjdqfscjmryv1mkv4l23zk8k23z8l4ymhd2f5w"; depends=[Hmisc Rcpp RcppArmadillo]; };
   strataG = derive2 { name="strataG"; version="2.0.2"; sha256="1rf1xf07yb0dzasgig9sfm4i9ggdkjgy5iiysqgdapk3sxs26c8r"; depends=[adegenet ape apex copula data_table DT ggplot2 gridExtra Hmisc pegas phangorn RColorBrewer Rcpp shiny shinyFiles survival swfscMisc]; };
@@ -11019,20 +11240,20 @@ in with self; {
   stratvns = derive2 { name="stratvns"; version="1.0"; sha256="1bw9l389lxiji4h7hrsshf24v135h6la9dg3xxjly53d4fi56ifh"; depends=[MultAlloc Rglpk sampling snowfall stratification]; };
   straweib = derive2 { name="straweib"; version="1.0"; sha256="0bh2f4n4i7fiki52sa57v96757qw1gn1lcn7vgxmc5hk5rzp2mi8"; depends=[]; };
   stream = derive2 { name="stream"; version="1.2-4"; sha256="1xk9lnvf9xld74z4sxbwpgxl7cbni88cjyxqzxr0r9pn9vcpwima"; depends=[animation clue cluster clusterGeneration dbscan fpc MASS mlbench proxy Rcpp]; };
-  streamMOA = derive2 { name="streamMOA"; version="1.1-2"; sha256="0mg113v8zy6kh67hm91xfd9kd1x8vvvx03svhz70nz9npw00pvlz"; depends=[rJava stream]; };
+  streamMOA = derive2 { name="streamMOA"; version="1.1-3"; sha256="0vgnd27xl7lgir0ps3zsz7ca2vvjg8yp28zbfvdgvm3agk7dpra7"; depends=[rJava stream]; };
   streamR = derive2 { name="streamR"; version="0.2.1"; sha256="1ml33mj7zqlzfyyam23xk5d25jkm3qr7rfj2kc5j5vgsih6kr0gl"; depends=[RCurl rjson]; };
+  streambugs = derive2 { name="streambugs"; version="1.0"; sha256="1dyh5rwi47dn584nyy7f7vg5j5nlpz7ygcl8lwkj7prahplmzg5d"; depends=[deSolve]; };
   stremr = derive2 { name="stremr"; version="0.4"; sha256="0n8ickmzjqlxwrz8dsphh1nsbnsgp4mnwm52i5ji099ps5292f65"; depends=[assertthat data_table pander R6 Rcpp rmarkdown speedglm stringr zoo]; };
   stressr = derive2 { name="stressr"; version="1.0.0"; sha256="00b93gfh1jd5r7i3dhsfqjidrczf693kyqlsa1krdndg8f0jkyj7"; depends=[lattice latticeExtra XML xts]; };
-  strider = derive2 { name="strider"; version="1.0"; sha256="0qr2zgcnrxqmjqxxgd0kwby9ws8zhaw7iwdsspn1yznanr2g6b51"; depends=[BH Rcpp]; };
+  strider = derive2 { name="strider"; version="1.1"; sha256="00r6gbvwmla5h27iyi7rdfd0kr4alxz19fd7g2ba0in3779za3sw"; depends=[BH Rcpp]; };
   stringb = derive2 { name="stringb"; version="0.1.13"; sha256="004bp75yhrgr480v9774kfq7z5l9z0761cnrwj4yk7fxygk89a1x"; depends=[backports]; };
   stringdist = derive2 { name="stringdist"; version="0.9.4.6"; sha256="0j5b7hr53nr9xq44famkpwzi4khix93ffani5pwldqkf8bpdvhci"; depends=[]; };
-  stringformattr = derive2 { name="stringformattr"; version="0.1.1"; sha256="16kkmb933v8pzc4gwz4x2nm51sj82slwpxmmn6p6p8dq5nfzmx5q"; depends=[stringr]; };
-  stringgaussnet = derive2 { name="stringgaussnet"; version="1.1"; sha256="161fi78cd7yddbcq71z3fgx1q2sacg1n1ggrkrqz17icwzviqrh5"; depends=[AnnotationDbi biomaRt GO_db httr igraph limma org_Hs_eg_db pspearman RCurl RJSONIO simone VennDiagram]; };
+  stringformattr = derive2 { name="stringformattr"; version="0.1.2"; sha256="0x56k30clj5ajk0qg5sr8b9l0asz6ldivwr1ddy1vp1djliih1fx"; depends=[stringr]; };
   stringi = derive2 { name="stringi"; version="1.1.6"; sha256="122im5m8x9bqpahc0hbxmvdq6hnsmgnxwwyjpvbihyv2jq5kd44m"; depends=[]; };
-  stringr = derive2 { name="stringr"; version="1.2.0"; sha256="16hj2rmv8x03lp6cp2jk0k2plibvbggf444kp05przdvd03v7l31"; depends=[magrittr stringi]; };
+  stringr = derive2 { name="stringr"; version="1.3.0"; sha256="07dvfbkhv8gk6l32j43jvxpmqlhqp0mdby406h5a3bsc6k94ic13"; depends=[glue magrittr stringi]; };
   strip = derive2 { name="strip"; version="0.1.1"; sha256="18pz6ix6d661fvg1k1yyyiiwa1gdixynmpxl725ffd9lpykmfqbw"; depends=[rlist]; };
   stripless = derive2 { name="stripless"; version="1.0-3"; sha256="08mdp7kq6r5bk77j09477d1dnn7iwa346pr24b5bqsxwnbknyrsr"; depends=[lattice]; };
-  striprtf = derive2 { name="striprtf"; version="0.4.5"; sha256="002whpmzhqw8bhqbdilfmlz0q4hgh9yy4ad1kly6lngx2n3p7db0"; depends=[magrittr Rcpp stringr]; };
+  striprtf = derive2 { name="striprtf"; version="0.5.1"; sha256="1pv67grm8fb1plsfxrfrmv0yk6cjnf44ssawddlcxy9mvg3ka5mm"; depends=[magrittr Rcpp stringr]; };
   strucchange = derive2 { name="strucchange"; version="1.5-1"; sha256="0cdgvl6kphm2i59bmnppn1y3kv65ml111bk7yzpcx7vv8wh2w3kl"; depends=[sandwich zoo]; };
   structSSI = derive2 { name="structSSI"; version="1.1.1"; sha256="06rwmrgqc4qy4x0bhlshjdsjxfmp5fr9d1wjglhlb1gbp72fmkdv"; depends=[ggplot2 igraph multtest reshape2 rjson]; };
   structree = derive2 { name="structree"; version="1.1.5"; sha256="0m14jzhmkfn8dpxjzj8xh9zf6cggqj3awnfz7zh1xlkkka91jz8d"; depends=[lme4 mgcv penalized]; };
@@ -11040,7 +11261,8 @@ in with self; {
   strvalidator = derive2 { name="strvalidator"; version="2.0.0"; sha256="03f7clhs1hda3lkard7lbx4pfyqvhwm35r3d9sz2yksp5s78wbjk"; depends=[data_table ggplot2 gridExtra gtable gWidgets2 gWidgets2RGtk2 MASS plyr RGtk2 scales]; };
   stsm = derive2 { name="stsm"; version="1.9"; sha256="18ypmkd7l7m7qkahb0nqf8f1m8g4irxlw48v2ms0dq1bsnhbzx7j"; depends=[KFKSDS]; };
   stsm_class = derive2 { name="stsm.class"; version="1.3"; sha256="19jrja5ff31gh5k2zqhqsyd7w2ivr4s6bkliash6x8fmd22h5zs8"; depends=[]; };
-  stubthat = derive2 { name="stubthat"; version="1.2.0"; sha256="0ib1jvrhxahlpaqai0zg49jr2iwn04c0iimfgvhvx3hyp9qhhbll"; depends=[testthat]; };
+  stubthat = derive2 { name="stubthat"; version="1.2.1"; sha256="130naxzvswcyadwcgldvwnxxdxbfwx5vljac7901vn3ahjp75d8z"; depends=[testthat]; };
+  styler = derive2 { name="styler"; version="1.0.0"; sha256="03wpxq3gxfid96n1q8rgpz4sfl4y2j7g7dbjvjxgj1nalsg9lav7"; depends=[backports cli enc magrittr purrr rematch2 rlang rprojroot tibble withr]; };
   stylo = derive2 { name="stylo"; version="0.6.5"; sha256="15y7iwk1w9kkdhpbgbvi1cqzza4jgw8zxsp3xbqzhm4qaf4kymia"; depends=[ape class e1071 lattice pamr tcltk2 tsne]; };
   suRtex = derive2 { name="suRtex"; version="0.9"; sha256="0xcy3x1079v10bn3n3y6lxignb9n3h57w4hhrvzi5y14x05jjyda"; depends=[]; };
   subcopem2D = derive2 { name="subcopem2D"; version="1.2"; sha256="1yrjqg3y6i5m6k0zljq1p1pciicmc1vig3qd0wxaicz708rbp3yq"; depends=[]; };
@@ -11048,14 +11270,15 @@ in with self; {
   subgroup = derive2 { name="subgroup"; version="1.1"; sha256="1n3qw7vih1rngmp4fwjbs050ngby840frj28i8x7d7aa52ha2syf"; depends=[]; };
   subgroup_discovery = derive2 { name="subgroup.discovery"; version="0.2.0"; sha256="17z49l26sfly3fln2z1x9vd6a6rsxn65z9lcb8kjylngm5s63rqj"; depends=[]; };
   sublime = derive2 { name="sublime"; version="1.3"; sha256="0455fppc68azxknxjvxci4kjpcj6c1jkp9adbxqrn3qnnywaj5v2"; depends=[AnalyzeFMRI downloader oro_nifti]; };
+  submax = derive2 { name="submax"; version="1.1.1"; sha256="0b9x55gqzw20smr3hx9izvyr0i8zv0h03hadn4c7ks7w8ga5i0kj"; depends=[mvtnorm sensitivityfull]; };
   subniche = derive2 { name="subniche"; version="0.9.7"; sha256="1jsdcaf6d38j7c0ppjyilj0jd2dbpdldw6w4prmsbmx8mh7lplww"; depends=[ade4]; };
-  subplex = derive2 { name="subplex"; version="1.4-1"; sha256="1imfdiw8r7kb2i0ir7z69cwz2ai7a3nr248m4pqacad2m9hvkdwl"; depends=[]; };
+  subplex = derive2 { name="subplex"; version="1.5-2"; sha256="1v9xrnkapnq7v1jbhlg32ignklzf2vn8rqpayc8pzk8wvz53r33g"; depends=[]; };
   subprocess = derive2 { name="subprocess"; version="0.8.2"; sha256="1qyl8726vq94vqd6iyh9kca6wwxi3g7yv4b784wn2ifrm4waixxd"; depends=[]; };
   subrank = derive2 { name="subrank"; version="0.9.9"; sha256="1z6sp9rfmpy28gpw13bh0c7y98lbbgv1cciavg3gix01whqa49n3"; depends=[]; };
   subsamp = derive2 { name="subsamp"; version="0.1.0"; sha256="1bfz2z2qy1war3id8qr1asygwvwxgf2hhlh075hr6bjdkxz0j0nd"; depends=[]; };
   subscore = derive2 { name="subscore"; version="2.0"; sha256="1vscmzw6ama2kc7ic6b2rfbbczcpyhp0m4dd5khg9vkyihww5b5h"; depends=[CTT irtoys]; };
   subscreen = derive2 { name="subscreen"; version="0.2.2"; sha256="08s8ys0ban80xbyfzjimbgld4622c5bn0qwjmsa7g0dn5ss3ccq9"; depends=[data_table plyr]; };
-  subselect = derive2 { name="subselect"; version="0.13"; sha256="1zvvh6xcvbb05hxmyjwg80j2zhmqrlsjbj396k5s0kazkyvrwdyg"; depends=[corpcor ISwR MASS]; };
+  subselect = derive2 { name="subselect"; version="0.14"; sha256="03sfnpj219a0ma92c2z953bh2y6s7w2c84lf2shnghmmxmg7jq9l"; depends=[corpcor ISwR MASS]; };
   subsemble = derive2 { name="subsemble"; version="0.0.9"; sha256="0vzjmxpdwagqb9p2r4f2xyghmrprx3nk58bd6zfskdgj0ymfgz5z"; depends=[SuperLearner]; };
   subspace = derive2 { name="subspace"; version="1.0.4"; sha256="0p2j0lnwj3ym1v4xla6r97zjikb8alnibdc690xn9c0z21hmv43v"; depends=[colorspace ggvis rJava stringr]; };
   subspaceMOA = derive2 { name="subspaceMOA"; version="0.6.0"; sha256="1q2n4q87zaxwaak77b6rff97n9sx6nflshqf73r2q8hflfs3sxv3"; depends=[fields ggplot2 gridExtra magrittr rJava shiny stream streamMOA]; };
@@ -11063,9 +11286,10 @@ in with self; {
   sudoku = derive2 { name="sudoku"; version="2.6"; sha256="13j7m06m38s654wn75kbbrin5nqda4faiawlsharxgrljcibcbrk"; depends=[]; };
   sudokuAlt = derive2 { name="sudokuAlt"; version="0.1-11"; sha256="1hv9d99ir1xz6p0arxr77dv5qb45sr8jhapm6wf755l7pxlqqklq"; depends=[magrittr]; };
   sugrrants = derive2 { name="sugrrants"; version="0.1.1"; sha256="08f5xdgimdvpivzrlwvdyrmy21nbh379pgfdrx4lxqcxd55y2hil"; depends=[dplyr ggplot2 lubridate purrr readr rlang tidyr timeDate]; };
+  sumFREGAT = derive2 { name="sumFREGAT"; version="1.0.0"; sha256="13g3px3c3dxacrvgwrvqdp8lm7k185npr0dlq3siq9x9mgjr7hsj"; depends=[Matrix]; };
   summariser = derive2 { name="summariser"; version="0.1.0"; sha256="0a6wyb0r1i0cynld002q96ylr58jz76n5jqjz8gm6a3csjn9qss7"; depends=[dplyr ggplot2 lazyeval plotrix]; };
-  summarytools = derive2 { name="summarytools"; version="0.6.5"; sha256="1ddvwn0rfyrlfar1kpwggxnpp9dpswdy8v5alcv3kanp540hnmb1"; depends=[Hmisc htmltools matrixStats pander pryr rapportools rstudioapi xtable]; };
-  sunburstR = derive2 { name="sunburstR"; version="1.0.2"; sha256="16z2c6xaf1mss5qygwpacn1slqzlkb502d1rw40m48v5akfg93sx"; depends=[d3r dplyr htmltools htmlwidgets]; };
+  summarytools = derive2 { name="summarytools"; version="0.8.2"; sha256="014hxyk0r87j5prqdckxy7h41agk2p1w1kxzl0a3pxwbj1j0r2fh"; depends=[htmltools matrixStats pander pryr rapportools RCurl]; };
+  sunburstR = derive2 { name="sunburstR"; version="1.0.3"; sha256="0xxxi01klrm7kspi588n4h5zdzhph5vihs26n2x8fdm2k82jyjp9"; depends=[d3r dplyr htmltools htmlwidgets]; };
   suncalc = derive2 { name="suncalc"; version="0.3"; sha256="1x7k4rpl6f1arq4z76zfx3nv0d0b4x3q6sk0jz5d4azq0i364nx9"; depends=[V8]; };
   supc = derive2 { name="supc"; version="0.1"; sha256="1cq0lr04m409xr3i1hphww4ldr8z3kqq2gmp7hm3yp0iz2gy3m9a"; depends=[BH Rcpp]; };
   supclust = derive2 { name="supclust"; version="1.0-7"; sha256="0437pccagvqv6ikdsgzpif9yyiv6p24lhn5frk6yqby2asj09727"; depends=[class rpart]; };
@@ -11076,7 +11300,7 @@ in with self; {
   superheat = derive2 { name="superheat"; version="0.1.0"; sha256="01v8s6px1k5fajlm6py3ksr1i853kwwlky1yryzhy3p1cxhwgg83"; depends=[dplyr ggdendro ggplot2 gtable magrittr plyr scales]; };
   superpc = derive2 { name="superpc"; version="1.09"; sha256="1p3xlg2n7p57n54g2w4frfrng5vjh97kp6ax4mrgvj3pqmd1m69z"; depends=[survival]; };
   supervisedPRIM = derive2 { name="supervisedPRIM"; version="2.0.0"; sha256="1j5gsy119pvrhkkg048lyk6hjvn9x1bhmfy5g824gj3k1w5slrib"; depends=[prim]; };
-  support_BWS = derive2 { name="support.BWS"; version="0.1-4"; sha256="1zg0wgqhcnk3sx87k3l9z4zf3ck3gk75rn37am1rq6wbzbfm96i4"; depends=[]; };
+  support_BWS = derive2 { name="support.BWS"; version="0.2-0"; sha256="1yfjpr9v9zsbkysm3r6zk9r0a072g038lmj9wk4014a3rk9kmm80"; depends=[]; };
   support_BWS2 = derive2 { name="support.BWS2"; version="0.1-1"; sha256="1jay1ak8242vn9a0ippfdd48vdxqqz9j8frbgf5ncffdmzzn1n21"; depends=[]; };
   support_CEs = derive2 { name="support.CEs"; version="0.4-1"; sha256="1rbyl7v6m07dsp08kkk9020bh39rhx89q7d05rc5kxb6f7y66jyz"; depends=[DoE_base MASS RCurl simex XML]; };
   supportInt = derive2 { name="supportInt"; version="1.1"; sha256="14fh75sds05c06xkcfbijd8my3sa9kpnczzh96xx0gwj1193yya9"; depends=[ProfileLikelihood]; };
@@ -11097,9 +11321,9 @@ in with self; {
   survPresmooth = derive2 { name="survPresmooth"; version="1.1-10"; sha256="0m1037v857g140lypck5zq2zf52rkdxzaqlj9kjn7h7lp6gif6ia"; depends=[]; };
   survRM2 = derive2 { name="survRM2"; version="1.0-2"; sha256="0pvp65c1kkbkcci4l3cvq4a5krmv58jwb9abz5225ql6jyawzlsw"; depends=[survival]; };
   survSNP = derive2 { name="survSNP"; version="0.24"; sha256="0mzwcp8zfqvsiapa446si9qb6wyymnw5zj6acj6f2cfjpyi76k4w"; depends=[foreach lattice Rcpp survival xtable]; };
-  surveillance = derive2 { name="surveillance"; version="1.15.0"; sha256="1s8gh0n0k7z1hd2l5rbqv9jbma9zgfsavkgfp148wzp67cyj5lkx"; depends=[MASS Matrix nlme polyCub Rcpp sp spatstat xtable]; };
+  surveillance = derive2 { name="surveillance"; version="1.16.0"; sha256="1nbskhbs8qfwnchig4rckbgy296ifl1hx0w3v71knj693x54r9cj"; depends=[MASS Matrix nlme polyCub Rcpp sp spatstat xtable]; };
   survexp_fr = derive2 { name="survexp.fr"; version="1.0"; sha256="12rjpnih0xld4dg5gl7gwxdxmrdmyzsymm7j05v98ynldd1jkjl8"; depends=[survival]; };
-  survey = derive2 { name="survey"; version="3.32-1"; sha256="0law5dw2kprbkclrq0xj5vy6qcbx4i0rmasmsawyl35q4y1v01ny"; depends=[lattice Matrix survival]; };
+  survey = derive2 { name="survey"; version="3.33"; sha256="11pmk26hirq5p7p4131crpb175hvgg4id5y5m14rskpx8nbp9l94"; depends=[lattice Matrix survival]; };
   surveybootstrap = derive2 { name="surveybootstrap"; version="0.0.1"; sha256="13rp6gj1dgdzcjbi2403pldygp1dyqx8zj0r1nvyghpi06x5gpb7"; depends=[dplyr functional plyr Rcpp RcppArmadillo stringr]; };
   surveydata = derive2 { name="surveydata"; version="0.2.0"; sha256="1iwhjhazfy38dbcj224kz3zbw2nvpq01ry54wmmkg9d0n6mb02h4"; depends=[dplyr magrittr plyr purrr stringr]; };
   surveyeditor = derive2 { name="surveyeditor"; version="1.0"; sha256="073219bcn1hlxl9ql6gncfvgn0m37pz5sb7h94nq6lf35dymq5zq"; depends=[]; };
@@ -11108,14 +11332,13 @@ in with self; {
   survidm = derive2 { name="survidm"; version="1.0.0"; sha256="13iwl687g4qps6s3d8x0xr916b2ja6487dwnyqwc3nwr6gadqicw"; depends=[doParallel doRNG foreach KernSmooth np survival TPmsm]; };
   survivALL = derive2 { name="survivALL"; version="0.9.1"; sha256="0l32p64a1izsrcplx09wlisca3daysl5cx2vhh4k08sxizyg90c1"; depends=[Biobase broom cowplot data_table desiR ggplot2 ggthemes magrittr pander png readr survcomp survival survsim testthat viridis]; };
   survival = derive2 { name="survival"; version="2.41-3"; sha256="07cnr0hnki6ybbjll54l4s5lllhk19vni5f8m0mvsfp99ls7qygk"; depends=[Matrix]; };
-  survivalMPL = derive2 { name="survivalMPL"; version="0.1.2"; sha256="19gp57c1cwcfvpvz5bxvcrg7l1nbdr1i42c80q51pyacq51ahxs5"; depends=[survival]; };
+  survivalMPL = derive2 { name="survivalMPL"; version="0.2"; sha256="05bfa9fx841kh9g2jcs1dimsxkjnf4bxgamcnjpisx3a644c1gkn"; depends=[MASS survival]; };
   survivalROC = derive2 { name="survivalROC"; version="1.0.3"; sha256="0wnd65ff5w679hxa1zrpfrx9qg47q21pjxppsga6m3h4iq1yfj8l"; depends=[]; };
-  survivalsvm = derive2 { name="survivalsvm"; version="0.0.3"; sha256="10a5qjhwbk41g33aa2rsgp86l8pks5bmn83z3906q39yk0x7xqrv"; depends=[Hmisc kernlab Matrix pracma quadprog survival]; };
-  survminer = derive2 { name="survminer"; version="0.4.1"; sha256="1ma1ajn2z57zfqdx5w330wagl3hrzzzj25fjpzrk8bkrcb4bxss9"; depends=[broom cmprsk dplyr ggplot2 ggpubr gridExtra magrittr maxstat purrr scales survival survMisc tibble tidyr]; };
-  survrec = derive2 { name="survrec"; version="1.2-2"; sha256="0b77ncr1wg2xqqg1bv1bvb48kmd9h3ja2dysiggvprzjrj7hdlmx"; depends=[boot]; };
+  survivalsvm = derive2 { name="survivalsvm"; version="0.0.5"; sha256="1b4hrdrqq1z0kfn8vpdwg54388m25df2s6w9i574x3mkxkmkjkga"; depends=[Hmisc kernlab Matrix pracma quadprog survival]; };
+  survminer = derive2 { name="survminer"; version="0.4.2"; sha256="15npx3q7xf7sl7pbb1476khgfpqrvidqcb101iim3iym125sl54r"; depends=[broom cmprsk dplyr ggplot2 ggpubr gridExtra magrittr maxstat purrr scales survival survMisc tibble tidyr]; };
   survsim = derive2 { name="survsim"; version="1.1.4"; sha256="16njbqlzmk34zrh485kc0a52yacdyj9z4z4a9zcq1z5psm87c58m"; depends=[eha statmod]; };
   survtmle = derive2 { name="survtmle"; version="1.0.0"; sha256="1sdp88br1ry6yzzav67787n0clpq6vjffxqpkvld93dyvmlb6zb1"; depends=[ggplot2 Matrix plyr stringr SuperLearner tidyr]; };
-  survutils = derive2 { name="survutils"; version="1.0.0"; sha256="1dha1i2k9dyc9m9awqiq2ypy617zmw9yflfzv182z5fpd491ghrv"; depends=[broom dplyr ggplot2 lazyeval magrittr purrr survC1 survival]; };
+  survutils = derive2 { name="survutils"; version="1.0.1"; sha256="09844i5nfyn0fm5i8ca96xz8dza21shh2f89w41zh17xaxvidjsw"; depends=[broom dplyr ggplot2 glue lazyeval magrittr purrr survC1 survival]; };
   sutteForecastR = derive2 { name="sutteForecastR"; version="0.1"; sha256="13dd0v3l3s7xb1wnpf6qvnvclzab87831z8bsxsq53vpb26xcw1b"; depends=[forecast forecastHybrid fracdiff robets]; };
   svDialogs = derive2 { name="svDialogs"; version="0.9-57"; sha256="1qwnimzqz7jam3jnhpr90bgwp9zlsswy2jl17brdpsrpiwcg6jlr"; depends=[svGUI]; };
   svDialogstcltk = derive2 { name="svDialogstcltk"; version="0.9-4"; sha256="16166f8i6nsg7palqmnlp5b9s91d6ja9n0zm6rcvd2fwnw2ljkr4"; depends=[svDialogs svGUI]; };
@@ -11123,36 +11346,37 @@ in with self; {
   svHttp = derive2 { name="svHttp"; version="0.9-55"; sha256="0qxsh6ifk3fszgzz497qwia4pxzplwraf2qnn5cqlv5l79nja5yq"; depends=[svMisc]; };
   svIDE = derive2 { name="svIDE"; version="0.9-52"; sha256="19wsmi1i7nlnqdah1h2pxzsy8m50bnb282fdbj4219p86bb92a86"; depends=[svMisc XML]; };
   svKomodo = derive2 { name="svKomodo"; version="0.9-63"; sha256="0x2774lhckhg8kw6plsn6dpks3b3fisb0psa03p7di7jx8vrkg5n"; depends=[svMisc]; };
-  svMisc = derive2 { name="svMisc"; version="0.9-70"; sha256="1xprymz5hblbc929kmbaz0lj633xvgz6mm4snhhjib47cz5anl1w"; depends=[]; };
+  svMisc = derive2 { name="svMisc"; version="1.0-1"; sha256="17prhh92zbibkkdqyqdg8bp4fvsmj6ziaii3fxq3z0vnl6gj9p86"; depends=[]; };
   svSocket = derive2 { name="svSocket"; version="0.9-57"; sha256="0id93b500iybza6sbn60ybm91mkh5cjpvhypqs4f3dv13m6blb9j"; depends=[svMisc]; };
   svSweave = derive2 { name="svSweave"; version="0.9-8"; sha256="0zkng8lwdpjdbic9f6jnk2ndxbch2kjyz71ds1bksvd3kmk03lks"; depends=[knitr]; };
   svTools = derive2 { name="svTools"; version="0.9-4"; sha256="0szr5dcxjsh5p1nkszvmj0vmi9x70d656hfvhmqf0wyjwv63vp90"; depends=[codetools svMisc]; };
   svUnit = derive2 { name="svUnit"; version="0.7-12"; sha256="16iiryj3v34zbnk1x05g30paza7al1frqx52fkw8ka61icizsrf5"; depends=[]; };
   svWidgets = derive2 { name="svWidgets"; version="0.9-44"; sha256="18k06wldcg6xpyf8nz9rdbig5nhvghn7zgf1316413kq3v90vz7b"; depends=[svMisc]; };
   svapls = derive2 { name="svapls"; version="1.4"; sha256="12gk8wrgp556phdv89jqza22zmsnachsydr5vlz38s664d2lplbg"; depends=[class pls]; };
-  svars = derive2 { name="svars"; version="1.0.0"; sha256="0aa96g28yd1dymyqdr4gwlgvpb0diybwbximfjqjxicrzik69aaf"; depends=[clue copula DEoptim expm ggplot2 pbapply reshape2 steadyICA tsDyn vars]; };
+  svars = derive2 { name="svars"; version="1.1.1"; sha256="1hd052xksciwqqviwr29ch8s85ci8j15c8dqrbdra803lllfkngf"; depends=[clue copula DEoptim expm ggplot2 pbapply reshape2 steadyICA tsDyn vars]; };
   svcm = derive2 { name="svcm"; version="0.1.2"; sha256="1lkik65md8xdxzkmi990dvmbkc6zwkyxv8maypv2vbi2x534jkhl"; depends=[Matrix]; };
   svd = derive2 { name="svd"; version="0.4.1"; sha256="00plnwrjnp3majssr3qbz2zp25z9cfivgpggyfvy4lnc4av5qn3g"; depends=[]; };
   svdvis = derive2 { name="svdvis"; version="0.1"; sha256="1z3z86izl2gpxllpx56vn6kkdg9cjjikfd90hdjnfi4bmmpx50dn"; depends=[GGally ggplot2 gridExtra RColorBrewer reshape2 scales]; };
   svdvisual = derive2 { name="svdvisual"; version="1.1"; sha256="02mzh2cy4jzb62fd4m1iyq499fzwar99p12pyanbdnmqlx206mc2"; depends=[lattice]; };
   svenssonm = derive2 { name="svenssonm"; version="0.1.0"; sha256="0pvay9vfrcafaq270pq6glp2b74zdfgldksl13cwdb0wk7qx7731"; depends=[]; };
   svgPanZoom = derive2 { name="svgPanZoom"; version="0.3.3"; sha256="09gfa2943bvmjpnhnc2nr85wddkv662k30pxsqvvvq1va64rzpkc"; depends=[htmlwidgets]; };
-  svgViewR = derive2 { name="svgViewR"; version="1.2"; sha256="0h3smaplnkkvbl9c6lwl67jbk34m6sygkh2d82xz66hbyw2i6q7k"; depends=[]; };
+  svgViewR = derive2 { name="svgViewR"; version="1.3"; sha256="0771k1v0aqlq8q9rvynb5dkwq0kmlsn8nh251lka98jwh36vhld0"; depends=[rjson Rook]; };
   svglite = derive2 { name="svglite"; version="1.2.1"; sha256="1bws3lc4hlhln11zd7lalhiyc43yk6c6vrzy41fkxk1dkjazfx51"; depends=[BH gdtools Rcpp]; };
   svmadmm = derive2 { name="svmadmm"; version="0.3"; sha256="15ccda1r9cc6v30j37i052rdwxgw0wg37hwyn2vp8c7bkr0ybgkm"; depends=[kernlab]; };
   svmpath = derive2 { name="svmpath"; version="0.955"; sha256="02j5xs4gg8k16imnwk6aram168cv1dqdrky3bszyc98l7xd0nlrj"; depends=[]; };
   svs = derive2 { name="svs"; version="1.1.0"; sha256="0575msaxg04ck76mbr815m29y895qvg8b9qg4y0ggv6b1lvwp5p6"; depends=[gtools]; };
   svyPVpack = derive2 { name="svyPVpack"; version="0.1-1"; sha256="15k5ziy2ng853jxl66wjr27lzc90l6i5qr08q8xgcs359vn02pmp"; depends=[survey]; };
-  swCRTdesign = derive2 { name="swCRTdesign"; version="2.1"; sha256="0c5pya5jgpj5ncrvpzahhrbhl7b39w19f3vl06r8q0nandbn7rwq"; depends=[]; };
+  swCRTdesign = derive2 { name="swCRTdesign"; version="2.2"; sha256="0kggniy5p900cj074swh7g47zf8bhwjmqph9b5frw86nycxwyn3v"; depends=[]; };
   swa = derive2 { name="swa"; version="0.8.1"; sha256="1zy1a6c17vmdkmkwp8vv3niww2zs1m0hylsa0b2cz68vfhnmpim4"; depends=[ggplot2 reshape ROCR]; };
   swagger = derive2 { name="swagger"; version="3.4.0"; sha256="1590335n9l1s65li5018m0r3ss67ccgy10lnywxi2ypya71c58zs"; depends=[]; };
   swamp = derive2 { name="swamp"; version="1.3.1"; sha256="1l4rk79hbggn31y5skslqsz9bv7lmya4q5ligki3x1677345hyhv"; depends=[amap gplots impute MASS]; };
   swapClass = derive2 { name="swapClass"; version="1.0.1"; sha256="0wg6km261xdywakxi64dw4wwprbrkw217q4c6622z0mgm9sjgpym"; depends=[inline]; };
+  swatches = derive2 { name="swatches"; version="0.5.0"; sha256="1kivscgka8gn44rjj0s5sjan1s04znnyn0nd37a74zaik0hm8zs0"; depends=[colorspace httr pack stringr xml2]; };
   sweep = derive2 { name="sweep"; version="0.2.0"; sha256="11hyv48hldacdbi7avvgmrqk9andjkabdswf1blfb4qyc2z0199v"; depends=[broom devtools dplyr forecast lazyeval lubridate tibble tidyr timetk]; };
   sweidnumbr = derive2 { name="sweidnumbr"; version="1.4.1"; sha256="014zbp6a66gv7b0f2gmzvifllz266zrc14ihawksvyp1mcxz2ipg"; depends=[lubridate stringr]; };
   swfscMisc = derive2 { name="swfscMisc"; version="1.2"; sha256="08p2crsx8zi6qprs14mhdyq9x5sjlp3a46c1zzvp6741an4fy640"; depends=[ggplot2 mapdata maps reshape2 spatstat]; };
   swirl = derive2 { name="swirl"; version="2.4.3"; sha256="1l7gwisk3sjslh6zh4cq3vxf5y84af2fr078cp4i86rw1w2j9d44"; depends=[digest httr RCurl stringr testthat yaml]; };
-  swirlify = derive2 { name="swirlify"; version="0.5.1"; sha256="1hj0y4qrzwr41gk79mxzgawincw0v86bc5735i6kbl0khz1i76z1"; depends=[base64enc readr rmarkdown shiny shinyAce stringr swirl whisker yaml]; };
+  swirlify = derive2 { name="swirlify"; version="0.5.2"; sha256="07r6rdj079ryafdgs0p8jhnk4h7iqm7agh9wjhvm12abbwjr9g1x"; depends=[base64enc readr rmarkdown shiny shinyAce stringr swirl whisker yaml]; };
   switchnpreg = derive2 { name="switchnpreg"; version="0.8-0"; sha256="1vaanz01vd62ds2g2xv4kjlnvp13h59n8yqikwx07293ixd4qhpw"; depends=[expm fda HiddenMarkov MASS]; };
   switchr = derive2 { name="switchr"; version="0.12.6"; sha256="0i5xcjhjnqk3qbmc8kr7q8khrjvqdp7yy8yydkz6pmjgzwkyw9hs"; depends=[RCurl RJSONIO]; };
   switchrGist = derive2 { name="switchrGist"; version="0.2.2"; sha256="1mzlwnldapzmykfmz51dwr258iizmrrzi5bj84gdjbbg80r3s5ds"; depends=[gistr httpuv RJSONIO switchr]; };
@@ -11165,26 +11389,26 @@ in with self; {
   sybilcycleFreeFlux = derive2 { name="sybilcycleFreeFlux"; version="2.0.0"; sha256="0p3w7ipyrqrh7nf52h8qmr4fikyinm8an7npmcb7kwjd59rcy554"; depends=[MASS Matrix sybil]; };
   sylcount = derive2 { name="sylcount"; version="0.1-0"; sha256="1dxbqbjyvkg7cx234icby9fjdjz1z4l4crqd7kv8m05fv69pg224"; depends=[]; };
   syllable = derive2 { name="syllable"; version="0.1.3"; sha256="1ymnczwx58h720hsm0s9zq3ddwg6gn6bgg0m8zw24i0nlivx0yjg"; depends=[data_table stringi textclean textshape]; };
-  sylly = derive2 { name="sylly"; version="0.1-3"; sha256="1zd3gwyzxnym232324zrn0696l47fmgvr2fdv91ssgr42pchsj60"; depends=[]; };
+  sylly = derive2 { name="sylly"; version="0.1-4"; sha256="14lw5sxrdvidk0465a7x0jz74cvqjbqv0wlqdy78qzbq4ilcmcaa"; depends=[]; };
   symDMatrix = derive2 { name="symDMatrix"; version="1.0.0"; sha256="0xss7f7hkrf2afchccfavymylfybnp9nxawqxd2vdjni95kbd595"; depends=[]; };
-  symbolicDA = derive2 { name="symbolicDA"; version="0.4-2"; sha256="1vn7r7b7yyn2kp8j3ghw50z49yzvwhm0izc6wgc7a99300xrr77s"; depends=[ade4 cluster clusterSim e1071 rgl shapes XML]; };
+  symbolicDA = derive2 { name="symbolicDA"; version="0.4-3"; sha256="012ha8m3137gns0q38lanpijdrqq6kcw934f2jgnxj6inl6drca0"; depends=[ade4 cluster clusterSim e1071 rgl shapes XML]; };
   symbols = derive2 { name="symbols"; version="1.1"; sha256="1234rx3divhg60p0h0zn11viqn51fm6b8876m6rip2i6z8vrg319"; depends=[shape]; };
   symmoments = derive2 { name="symmoments"; version="1.2"; sha256="074k0285c0yri39zags420kjls6kjlvlhymg3r7y24h42zdy82d4"; depends=[combinat cubature multipol mvtnorm]; };
   synRNASeqNet = derive2 { name="synRNASeqNet"; version="1.0"; sha256="05ncwbv8kvvhqqrxa8qq7s0jc6krs5a56ph04z50iwgd91rzyi7x"; depends=[GenKern igraph KernSmooth parmigene]; };
   synbreed = derive2 { name="synbreed"; version="0.12-6"; sha256="03h3j2g6ynnbmsc6yhbmmmrwj69jf3gjpp1wnsd02yc5kf4r1q57"; depends=[abind BGLR doBy doParallel foreach igraph lattice LDheatmap MASS qtl regress]; };
   synbreedData = derive2 { name="synbreedData"; version="1.5"; sha256="16wv9r7p0n8726qv0jlizmkvnrqwjj1q4xaxvfmj9611rm47vckx"; depends=[]; };
-  synchronicity = derive2 { name="synchronicity"; version="1.1.9.1"; sha256="0d9skpwmsnkn4xb3f2kgyyv8bhdi0r9p1kj3cvi0s92fjjnpi00c"; depends=[BH bigmemory_sri Rcpp]; };
+  synchronicity = derive2 { name="synchronicity"; version="1.3.2"; sha256="1idrjzl7nkamf1ip55s6qcf64s63xs9j8z9jv3r89p6r5lw7k5mv"; depends=[BH bigmemory_sri Rcpp uuid]; };
   synchrony = derive2 { name="synchrony"; version="0.2.3"; sha256="0fi9a3j8dfslf1nqx8d53fi635y3aq8isxw0dbjbpgk7rc71nzby"; depends=[]; };
   synlik = derive2 { name="synlik"; version="0.1.1"; sha256="0g4n78amydihsq4jg2i9barjm9g40zczasb31fj10yn6wir1dhv7"; depends=[Matrix Rcpp RcppArmadillo]; };
   synthACS = derive2 { name="synthACS"; version="1.0.1"; sha256="0jbhiadgc8f6h7ga685cm5i8y59lf76r8sgd629xfjj4jxn8ckdm"; depends=[acs data_table Rcpp]; };
-  synthpop = derive2 { name="synthpop"; version="1.4-0"; sha256="00xihkk9ybr9fmsxrx47n76nw64l4zjnjymxm609fyigc4cvlgzj"; depends=[classInt foreign ggplot2 lattice MASS nnet party plyr polspline proto randomForest rpart]; };
+  synthpop = derive2 { name="synthpop"; version="1.4-1"; sha256="0725gv7b7kj564rf0nz6djvk58i39d9vv4g12qmgnsipgjs9rsrw"; depends=[classInt foreign ggplot2 lattice MASS nnet party plyr polspline proto randomForest rpart]; };
   sys = derive2 { name="sys"; version="1.5"; sha256="0yskm5mzps4435yvld9nfp6i5lqdy5ckpdwydvvbyjznz5yv01x2"; depends=[]; };
-  sysfonts = derive2 { name="sysfonts"; version="0.7.1"; sha256="04kimfdp895c6839ss7lqahd77jx3lz2gd3i849c2vkwi89v6vs9"; depends=[]; };
+  sysfonts = derive2 { name="sysfonts"; version="0.7.2"; sha256="1jl66pyw9khi117523zanjjzdpnpgqdqx190w829xc4ljxzi8n55"; depends=[]; };
   sysid = derive2 { name="sysid"; version="1.0.4"; sha256="0fr9gf5yjin3zvz850z4r4pqc1r4mwx8d46sl64i4csdm9qnqagy"; depends=[bitops ggplot2 polynom reshape2 signal tframe zoo]; };
   systemfit = derive2 { name="systemfit"; version="1.1-20"; sha256="1qzgx4hn6f71hnk70ccf6inajprrb6my5af8q2manz41577z0ka7"; depends=[car lmtest MASS Matrix sandwich]; };
   systemicrisk = derive2 { name="systemicrisk"; version="0.4.1"; sha256="1zimkyj58lk3iq5x4g6a76dain65j36s8c8jhx25sqjr5z2zmfsr"; depends=[lpSolve Rcpp]; };
-  syuzhet = derive2 { name="syuzhet"; version="1.0.1"; sha256="0b0w98mx0zf28c55qmv93hfcfcjplrfk68qk2691fas23q14jn56"; depends=[dtt NLP openNLP zoo]; };
-  tRophicPosition = derive2 { name="tRophicPosition"; version="0.7.3"; sha256="1r7cn9cxncszykc6rajiv94a937qf4f0rmlhsjfgpshv2sn91cdx"; depends=[coda ggplot2 gridExtra hdrcde MCMCglmm plyr rjags SIBER]; };
+  syuzhet = derive2 { name="syuzhet"; version="1.0.4"; sha256="0wf4rls7v7h7zkq2k550d16aqvaij27iim85cwif7dkbinajfngi"; depends=[dplyr dtt NLP textshape tidyr zoo]; };
+  tRophicPosition = derive2 { name="tRophicPosition"; version="0.7.5"; sha256="0qmkdsl0b2aw485vpbdqxdlfwg5a3i5bj4l67xv6h51fnbyfqfiz"; depends=[ArgumentCheck coda data_table ggplot2 gridExtra hdrcde MCMCglmm plyr rjags]; };
   taRifx = derive2 { name="taRifx"; version="1.0.6"; sha256="10kp06hkdx1qrzh2zs9mkrgcnn6d31cldjczmk5h9n98r34hmirx"; depends=[plyr reshape2]; };
   tab = derive2 { name="tab"; version="3.1.2"; sha256="1vc5swfy9p3bsv5bqqgk4w81apzk6d0m1xz0cbhii7rpn7x6zh1h"; depends=[gee survey survival xtable]; };
   taber = derive2 { name="taber"; version="0.1.0"; sha256="07a18kn65b4cxxf1z568n7adp6y3qx96nrff3a3714x241sd5p6i"; depends=[dplyr magrittr]; };
@@ -11192,45 +11416,47 @@ in with self; {
   table1xls = derive2 { name="table1xls"; version="0.4.0"; sha256="0ixbshbp9hkcg12hj32vgb5bp0pj4rbc3i6g1xdg2zhqp7zanics"; depends=[XLConnect]; };
   tableHTML = derive2 { name="tableHTML"; version="1.1.0"; sha256="0j2dk11h0dvibppyxjix4pxr6i9ji9ipzaizsr1fadrpk5xzawd5"; depends=[htmltools magrittr shiny]; };
   tableMatrix = derive2 { name="tableMatrix"; version="0.8"; sha256="00l03blrrkwdrihqnwz8afx6s3d7a19laj44584546yd3prqx5dy"; depends=[data_table]; };
-  tableone = derive2 { name="tableone"; version="0.8.1"; sha256="1rzh59ij53wzhnsxib47pgqmcmk65h0s9i9ifmwcvgjmcx71mn86"; depends=[e1071 gmodels MASS nlme survey zoo]; };
+  tableone = derive2 { name="tableone"; version="0.9.2"; sha256="12lyyhfirj768fws1j93qhc6n8b89hrlafixiilsg7fy14w89620"; depends=[e1071 gmodels labelled lmerTest MASS nlme survey zoo]; };
   tableplot = derive2 { name="tableplot"; version="0.3-5"; sha256="1jkkl2jw7lwm5zkx2yaiwnq1s3li81vidjkyl393g1aqm9jf129l"; depends=[]; };
   tables = derive2 { name="tables"; version="0.8.3"; sha256="1n0kqsvwx2vg7nwyz7hi708xpf2jc9bz3y84aflnzcmbspj1wvf3"; depends=[Hmisc]; };
   tabplot = derive2 { name="tabplot"; version="1.3-1"; sha256="0yz3npn36q93gr0k9a4x5swap5fwxfc22b131kif3dfxkgklna06"; depends=[bit ff ffbase]; };
   tabplotd3 = derive2 { name="tabplotd3"; version="0.3.3"; sha256="0mbj45vb17wlnndpkhvq7xaawsb814x7zxa4rqbfgidvbm1p3abv"; depends=[brew httpuv RJSONIO Rook tabplot]; };
   tabuSearch = derive2 { name="tabuSearch"; version="1.1"; sha256="0bri03jksm314xy537dldbdvgyq6sywfmpmj2g2acdcli31kkpq0"; depends=[]; };
-  tabularaster = derive2 { name="tabularaster"; version="0.3.0"; sha256="1wym0m3i8k3vil8ylzn23jlzpaxjh3zndjiq3lwlz9xj8v96ni6n"; depends=[dplyr raster sp spbabel spex tibble viridis]; };
+  tabularaster = derive2 { name="tabularaster"; version="0.4.0"; sha256="1hgbynjp19xwpin31j0647ldbzxam2kmkqnvj6v8kd4svps0kr3g"; depends=[dplyr raster sp spbabel spex tibble viridis]; };
   tactile = derive2 { name="tactile"; version="0.1.0"; sha256="0ygray05jlxrg7mxg412s04jrxjyskxlrl0xgxir8s6mzjg79iqy"; depends=[gridExtra lattice latticeExtra MASS RColorBrewer]; };
-  tadaatoolbox = derive2 { name="tadaatoolbox"; version="0.14.0"; sha256="0rxkmzzmiz5q9chi13mn2l70z3kj8yjrj2hibq26vndxmpxchwz3"; depends=[broom car cowplot DescTools dplyr ggplot2 haven lazyeval lsr magrittr nortest pixiedust pwr ryouready sjlabelled sjmisc vcd viridis]; };
+  tadaatoolbox = derive2 { name="tadaatoolbox"; version="0.16.0"; sha256="0i69zyiqq8mc5wfc9r43dpcjhwmq4iwj605n4a6h4hma37jjnc2g"; depends=[broom car DescTools ggplot2 magrittr nortest pixiedust pwr viridis]; };
   tagcloud = derive2 { name="tagcloud"; version="0.6"; sha256="04zrh029n8pjlxlr6pdd7xhqqhavbrj3fhvhj6ygzlvi2jslxnwl"; depends=[RColorBrewer Rcpp]; };
   tailDepFun = derive2 { name="tailDepFun"; version="1.0.0"; sha256="1z2jrzly1adiwi8y0pndyfggpr0li6sjv9rkrc5mi47s0qjvr5qj"; depends=[copula cubature mvtnorm SpatialExtremes]; };
   tailloss = derive2 { name="tailloss"; version="1.0"; sha256="0lmjgjs6d94b70i10vx66fyvlxm5swwqbcjsnqa3lmldzz6m4jc1"; depends=[MASS]; };
   tangram = derive2 { name="tangram"; version="0.3.2"; sha256="1dyfyl608k6a7vx9w0s2r6jr0y430qvkqkrrv24wav7snza4d5q2"; depends=[base64enc digest htmltools magrittr R6 stringi stringr]; };
-  tatoo = derive2 { name="tatoo"; version="1.0.8"; sha256="1cvdjx0pvjcmhvsvh6c7xysx67bmzbyhr05w79jf0j9dngv3pndn"; depends=[assertthat colt crayon data_table magrittr openxlsx purrr rlang stringi]; };
+  tatoo = derive2 { name="tatoo"; version="1.1.0"; sha256="1dsycdp3vln1m1w3nhhrr60x8raw6gbihjpav0d4ad8qla2fq8nh"; depends=[assertthat colt crayon data_table magrittr openxlsx purrr rlang stringi withr]; };
   tau = derive2 { name="tau"; version="0.0-20"; sha256="1inpqc2cz1vvjkmp8h3jpjvnvj0y5cwbbj92jlq0322w5w45vip9"; depends=[]; };
   tawny = derive2 { name="tawny"; version="2.1.6"; sha256="0s6p0nnz1rpcnn2yfj1vvl54g57d8rv5s4y09azwz1z5ls7vnnlv"; depends=[futile_logger futile_matrix lambda_r lambda_tools PerformanceAnalytics quantmod tawny_types xts zoo]; };
   tawny_types = derive2 { name="tawny.types"; version="1.1.3"; sha256="1v0k6nn45rdczjn5ymsp2fqq0ijnlniyf3bc08ibd8yd1jcdyjnj"; depends=[futile_logger futile_options lambda_r lambda_tools quantmod xts zoo]; };
-  taxa = derive2 { name="taxa"; version="0.1.0"; sha256="1pfdh68q1x2n6x3idh1c5mbygqhsf2bkbg5c5bri0zj2pxmrmv0g"; depends=[dplyr jsonlite knitr lazyeval magrittr R6 rlang stringr tibble]; };
+  taxa = derive2 { name="taxa"; version="0.2.0"; sha256="16jif3s5xf4cawwkhpmjrwb0c4ycmwicrshd5m0arlkcfmq85623"; depends=[dplyr jsonlite knitr lazyeval magrittr R6 rlang stringr tibble]; };
   taxize = derive2 { name="taxize"; version="0.9.0"; sha256="07r56nhwqm3rny9d4g7h2azrxad6mg8dpfx9pxmyz5acl5g5xd32"; depends=[ape bold data_table foreach httr jsonlite natserv plyr reshape2 ritis rotl rredlist stringr tibble wikitaxa worrms xml2]; };
   taxizedb = derive2 { name="taxizedb"; version="0.1.4"; sha256="15gj9i18ysd83v9fidrrvw938dah04i10ahi3wh5dgjs5fd5ch2s"; depends=[curl DBI dbplyr dplyr hoardr magrittr RMySQL RPostgreSQL RSQLite]; };
-  taxlist = derive2 { name="taxlist"; version="0.1.2"; sha256="1cl97f8g92549y177b6888hfrmfvvhzx9gsqv6pbix2a67k8zvcz"; depends=[foreign taxize vegdata]; };
+  taxlist = derive2 { name="taxlist"; version="0.1.3"; sha256="0lsphap7brl67y458x29843wkxvvf2ppjn1crz4hby7wmn1psarx"; depends=[foreign taxize vegdata]; };
   taxonomizr = derive2 { name="taxonomizr"; version="0.2.2"; sha256="0drzsbr23kr3da6bawjrz8rl976mai0vcz19fr5aypsliqz32b41"; depends=[data_table R_utils RSQLite]; };
   tbart = derive2 { name="tbart"; version="1.0"; sha256="0m8l9ic7na70il6r9ha0pyrjwznbgjq7gk5xwa5k9px4ysws29k5"; depends=[Rcpp sp]; };
   tbdiag = derive2 { name="tbdiag"; version="0.1"; sha256="1wr2whgdk84426hb2pf8iiyradh9c61gyazvcrnbkgx2injkz65q"; depends=[]; };
   tbl2xts = derive2 { name="tbl2xts"; version="0.1.2"; sha256="1zz310253s6gz0hzzldil5r03mm7ngvvnba7hxm8fm9dhfmvkbj6"; depends=[dplyr lazyeval PerformanceAnalytics xts zoo]; };
   tcR = derive2 { name="tcR"; version="2.2.1.11"; sha256="1wyxjwyba08m80g2c40sdg3d5brs3qmq8azb6vzwh2wmgqlb5400"; depends=[data_table dplyr ggplot2 gridExtra gtable igraph Rcpp reshape2 scales stringdist]; };
-  tcgsaseq = derive2 { name="tcgsaseq"; version="1.6.3"; sha256="05dvbpfyrb3kl8shwr0rd433y0n6j94g5z9sraih2w43p58m01fn"; depends=[CompQuadForm ggplot2 GSA KernSmooth]; };
+  tccox = derive2 { name="tccox"; version="0.1.0"; sha256="0b7f8kfsh97viplkjiiy8xm5b94ijnb0m748wqrnxgrvy8ikiy5k"; depends=[survival]; };
+  tcgsaseq = derive2 { name="tcgsaseq"; version="1.6.6"; sha256="0sk8fydhfx1c3mrir3qx8bqcif220l6ggzmlw9yw8faha210ak2y"; depends=[CompQuadForm ggplot2 GSA KernSmooth]; };
   tcltk2 = derive2 { name="tcltk2"; version="1.2-11"; sha256="1ibxld379600xx7kiqq3fck083s8psry12859980218rnzikl65d"; depends=[]; };
   tclust = derive2 { name="tclust"; version="1.3-1"; sha256="1li62wynv81kb17fx7nk63a26qlb78l8fdf63in8yzcl7fkpji7y"; depends=[cluster mclust mvtnorm sn]; };
   tcpl = derive2 { name="tcpl"; version="1.2.2"; sha256="1f32qq5816qkyx3n16vgf13g2piv2pqn2nki3c91vg51bwfap7z1"; depends=[data_table DBI numDeriv RColorBrewer RMySQL RSQLite]; };
   tdROC = derive2 { name="tdROC"; version="1.0"; sha256="137j1m9pysjcz1gsfcym0438by3c7na21ccjlqf7xfccr1y8k2k6"; depends=[survival]; };
-  tdr = derive2 { name="tdr"; version="0.11"; sha256="1ga1lczqj5pka2yz7igxfm83xmkx7lla8pz6ryij0ybn284agszs"; depends=[ggplot2 lattice RColorBrewer]; };
+  tdr = derive2 { name="tdr"; version="0.13"; sha256="0i0hnb3fc4d1mbbxcpzmyfh1w2rahfjabg5iyxym3yjd6377al15"; depends=[ggplot2 lattice RColorBrewer]; };
   tdthap = derive2 { name="tdthap"; version="1.1-7"; sha256="0lqcw4bzjd995pwn2yrmzay82gnkxnmxxsqplpbn5gg8p6sf5qqk"; depends=[]; };
   tea = derive2 { name="tea"; version="1.0"; sha256="03wxhbgx17hl9bbzbfjmfa30q4fqszhs5y9imbp768fmzwbppn24"; depends=[eva]; };
   teachingApps = derive2 { name="teachingApps"; version="1.0.2"; sha256="0rdgylcjwgbsasvd2mvi4qp74c3n4vg8yr59a82c2sidfkllci36"; depends=[actuar d3heatmap d3Network data_table devtools diagram DiagrammeR dplyr DT dygraphs ggplot2 knitr leaflet magrittr markdown metricsgraphics miniUI needs networkD3 plotly radarchart Rcpp rprojroot scales shiny shinyAce shinydashboard shinythemes threejs tidyr visNetwork yaml]; };
   teamcolors = derive2 { name="teamcolors"; version="0.0.1"; sha256="07mqsbhrsy23qc4j1w1wji36cbh6dijkp6p7g3598nlzhw7ln3aj"; depends=[]; };
   teda = derive2 { name="teda"; version="0.1.1"; sha256="0yx469jbkw9cgx73zi5mkykrdn16kn01zh524x9411314aa32avx"; depends=[]; };
-  teigen = derive2 { name="teigen"; version="2.2.0"; sha256="0ljm8dz4hndnc37psr7mnl1gbxs1kghygz3cyqzld1xpjwsjc2cz"; depends=[]; };
+  teigen = derive2 { name="teigen"; version="2.2.2"; sha256="1k5k3lj6av5pyx130w1j7avd0jdmm12ryc71mi5mq49sp95ndl4v"; depends=[]; };
   telegram = derive2 { name="telegram"; version="0.6.0"; sha256="02wwa115f0vz2d9y4nf01397hjkpc3cv2gdl47snrajrm41gji7y"; depends=[curl httr jsonlite R6]; };
+  telegram_bot = derive2 { name="telegram.bot"; version="1.0.0"; sha256="10i126wa5dbpzxvr8f9zysfwg53051sk9cjdpdrjva1p3yvyn143"; depends=[httr R6 telegram]; };
   tempR = derive2 { name="tempR"; version="0.9.9.12"; sha256="1ipr9yb26f1mmyivbapbb83n1fxa4gpxqgb99p5nx6mzw71vyp4j"; depends=[]; };
   tempcyclesdata = derive2 { name="tempcyclesdata"; version="1.0.1"; sha256="0hciachv59kjpjs119r4z24jskzgnassi1yjg3cgl2r0hyglxxc3"; depends=[]; };
   tempdisagg = derive2 { name="tempdisagg"; version="0.25.0"; sha256="0zi11jqb3i5kd2z1bbkz8y7g16kmkcn3xpkwj2brv0s86wxwsny7"; depends=[]; };
@@ -11240,57 +11466,58 @@ in with self; {
   tensorA = derive2 { name="tensorA"; version="0.36"; sha256="1xpczn94a6vfkfibfvr71a7wccksg16pc22h0inpafna4qpygcwp"; depends=[]; };
   tensorBF = derive2 { name="tensorBF"; version="1.0.1"; sha256="1rnsff1ypwhn5z0xsxyk2z7jl6igscma1a0w613i81qf37iy81ba"; depends=[tensor]; };
   tensorBSS = derive2 { name="tensorBSS"; version="0.3.3"; sha256="1frda6k2jx6gjvnhkk7xjj8pbnc20jk0l8fzjsvgn40wf82xs3ff"; depends=[JADE Rcpp RcppArmadillo tensor tsBSS]; };
-  tensorflow = derive2 { name="tensorflow"; version="1.4.1"; sha256="02cadbnihkqinzvm3hgp5jg0k81xkynqihwz16c14qh76fx6ha9l"; depends=[config jsonlite processx reticulate rstudioapi tfruns yaml]; };
+  tensorflow = derive2 { name="tensorflow"; version="1.5"; sha256="00g5fdr0ij2ximmqgd7a1hz66462lkjf4q6pn0knkhxcgp7jv8nn"; depends=[config jsonlite processx reticulate rstudioapi tfruns yaml]; };
   tensorr = derive2 { name="tensorr"; version="0.1.0"; sha256="00zqklz3hqjv20giwqnd1d62x5hdm620hfdkn1x75i87dv92qn8m"; depends=[assertive_base assertive_properties assertive_types Matrix purrr]; };
   tensr = derive2 { name="tensr"; version="1.0.0"; sha256="05gclhljflkz98hgiq5bgbqjz8icxbdq6b84bn2995cx7v0x85ds"; depends=[]; };
   tergm = derive2 { name="tergm"; version="3.4.1"; sha256="10sanqbnqdyqafjjcwm99zfnpgrv18z4y2rgaq5wqq7nni184hfm"; depends=[coda ergm MASS network networkDynamic nlme robustbase statnet_common]; };
   termstrc = derive2 { name="termstrc"; version="1.3.7"; sha256="12bycwhjrhkadafcckc30jr0md0ssj21n4v75yjhy21yvqjx1d7a"; depends=[lmtest Rcpp rgl sandwich urca zoo]; };
   ternvis = derive2 { name="ternvis"; version="1.1"; sha256="16q1a1ns7q0d46js2m1hr6zm8msg3ncgp8w7yrwch11xq0759sb4"; depends=[dichromat mapdata maps maptools quadprog]; };
-  tesseract = derive2 { name="tesseract"; version="1.6"; sha256="1apcmbkrbyrcdjc39w46shbic404pnkmqqdr0bdp193svp5df8rb"; depends=[curl digest rappdirs Rcpp]; };
+  tesseract = derive2 { name="tesseract"; version="1.9"; sha256="0lrqh8s8xnz8yz52fjn9h8jv0xpf3nmkk7ic3zvlq96msa089szi"; depends=[curl digest rappdirs Rcpp stringr xml2]; };
   testassay = derive2 { name="testassay"; version="0.1.0"; sha256="06gks3k04m45kn946i525261v33ymwxpvgdy84kc7sp01xxx4rfv"; depends=[]; };
   tester = derive2 { name="tester"; version="0.1.7"; sha256="1x5m43abk3x3fvb2yrb1xwa7rb4jxl8wjrnkyd899ii1kh8lbimr"; depends=[]; };
   testforDEP = derive2 { name="testforDEP"; version="0.2.0"; sha256="1mgzhj8b35r5cm4bl0nnyxj0h7rwd28d17qvgvaky2kvm2r83cf9"; depends=[Hmisc minerva Rcpp]; };
   testit = derive2 { name="testit"; version="0.7"; sha256="07qsnhghdgyxdknzq7ngpkf3qw9939m3lvk9dv9nk2zypy4jhcq3"; depends=[]; };
-  testthat = derive2 { name="testthat"; version="1.0.2"; sha256="0pj1r01x4ny4capr83dfa19hi5i2sjjxky99schzip8zrq5dzxqf"; depends=[crayon digest magrittr praise R6]; };
-  testthis = derive2 { name="testthis"; version="1.0.2"; sha256="0h182lz4gp7ziq760lg0f9c8vv79d3kmf06pk7ry5zhhq8mmcib3"; depends=[assertthat devtools magrittr rprojroot stringi testthat usethis]; };
+  testthat = derive2 { name="testthat"; version="2.0.0"; sha256="155l53kb69jga5d8c5nvdwqlvlgfmk4vzyyl4d0108j53jnlgh1v"; depends=[cli crayon digest magrittr praise R6 rlang withr]; };
+  testthis = derive2 { name="testthis"; version="1.0.3"; sha256="1q42nhp4nsazn31lxymb3zfj928ygbiv6jy7f0j4m3p02w2hqz5n"; depends=[assertthat devtools magrittr rprojroot stringi testthat usethis]; };
   tetraclasse = derive2 { name="tetraclasse"; version="0.1.21"; sha256="1cl2cah0xi6x3rvvdy56iszai6rkbxc1w3x13v0l1z1nryff7c6a"; depends=[dplyr FactoMineR ggplot2 ggrepel magrittr reshape2 tibble tidyr]; };
   texPreview = derive2 { name="texPreview"; version="1.1.0"; sha256="085aa9qgnmf3mqan2pff0gcdrz7kxd84r12lz780r1mr05ckk8zk"; depends=[magick rstudioapi svgPanZoom xml2]; };
   texmex = derive2 { name="texmex"; version="2.4"; sha256="0s3x681f1qnbgmzi5iwqpmkfzpx9gsccd3q1vz1dppzq8fbid3c2"; depends=[ggplot2 mvtnorm]; };
-  texmexseq = derive2 { name="texmexseq"; version="0.3"; sha256="08zjsb541xqqs3lj7avx5147g2d0bh3v036x615srjx2pbxzhsvg"; depends=[dplyr ggplot2 testthat]; };
   texreg = derive2 { name="texreg"; version="1.36.23"; sha256="0yxaqimd7cyfrfpia6fnqm15lgs0bf5zyjzmnfm1v4qmf8kj8x6v"; depends=[]; };
-  text2vec = derive2 { name="text2vec"; version="0.5.0"; sha256="00bimgj82fbbicvbki22m3xvs42jqml3w3fmpw5rz743z2p8y34p"; depends=[data_table digest foreach futile_logger irlba magrittr Matrix R6 Rcpp RcppParallel sparsepp uuid]; };
-  textTinyR = derive2 { name="textTinyR"; version="1.0.8"; sha256="1z671yahpvw89gp23c5v0850672v4bd7yjg2z4lbsm7gj3lp87f4"; depends=[BH data_table Matrix R6 Rcpp RcppArmadillo]; };
+  text2vec = derive2 { name="text2vec"; version="0.5.1"; sha256="0vcp50mgpgxbf534vd8l56m8006i3sh8a4v9nrf9vxkq2pv7xygc"; depends=[data_table digest foreach futile_logger irlba Matrix mlapi R6 Rcpp RcppParallel sparsepp stringi]; };
+  textTinyR = derive2 { name="textTinyR"; version="1.0.9"; sha256="1spzmxywzx6xk9z8jwhyab1g96rjq979zkb4sabl0sp362ccalfy"; depends=[BH data_table Matrix R6 Rcpp RcppArmadillo]; };
   textcat = derive2 { name="textcat"; version="1.0-5"; sha256="039bzyz4jvh1hl2a2pfp328kr2mpb1a07j79yqf5cbqk3d5a197b"; depends=[slam tau]; };
-  textclean = derive2 { name="textclean"; version="0.3.1"; sha256="1k8wjzzh6nplrnyxq4cd7q4q0sn2fa5p5r2kaq2rd4j9sqrrypp0"; depends=[english qdapRegex stringi textshape]; };
+  textclean = derive2 { name="textclean"; version="0.6.3"; sha256="0i6linb782257clkdpl7rv354myl9wc1417ad2glhh53lgcprfk2"; depends=[data_table english lexicon qdapRegex stringi textshape]; };
   texteffect = derive2 { name="texteffect"; version="0.1"; sha256="0fwcbz7bpynvcivac16z77j8d398bf7vl4l8sppi9yvg72l0k94w"; depends=[boot ggplot2 MASS]; };
   textgRid = derive2 { name="textgRid"; version="1.0.1"; sha256="1wi5vq5f7ixhz39l5hqi2jlmjjacx4lyrs4h8xfbd47pj6g16lc6"; depends=[]; };
   textile = derive2 { name="textile"; version="0.1.2"; sha256="067zli6sl7bp9843spgx47hmw55aq61yinqw1lqifmrpk7b0ywk5"; depends=[]; };
-  textir = derive2 { name="textir"; version="2.0-4"; sha256="1ky22xar980afyydddahppad9m263mxnrdqpj1fcbmdhg8flwjgz"; depends=[distrom gamlr Matrix]; };
-  textmineR = derive2 { name="textmineR"; version="2.0.6"; sha256="1rmypjg4p1gazyi1jvxc145yha2dg2mkkm5hm6y37is2h62badx2"; depends=[lda Matrix Rcpp RcppArmadillo RcppProgress RSpectra SnowballC stringr text2vec tm topicmodels]; };
+  textir = derive2 { name="textir"; version="2.0-5"; sha256="0ban5qiinlxizqpcgafv4b5gwxlil6jdfarjd6l1m48awxh3mlnb"; depends=[distrom gamlr Matrix]; };
+  textmineR = derive2 { name="textmineR"; version="2.1"; sha256="1bnpnwpgnqcm22hhxmhqm445brry9cq3bzqkk51zj14q38sccx31"; depends=[lda Matrix Rcpp RcppArmadillo RcppProgress RSpectra SnowballC stringr text2vec tm topicmodels]; };
   textmining = derive2 { name="textmining"; version="0.0.1"; sha256="16wiykhrjs4djwa7q2wm4g8b3mrhh6hq9d9876w1j7c2s6zx69gd"; depends=[caret dplyr koRpus mallet networkD3 NLP rJava slam SnowballC stylo tm topicmodels wordcloud]; };
   textometry = derive2 { name="textometry"; version="0.1.4"; sha256="17k3v9r5d5yqgp25bz69pj6sw2j55dxdchq63wljxqkhcwxyy9lh"; depends=[]; };
-  textrank = derive2 { name="textrank"; version="0.1.0"; sha256="1hs7k3sgqb4k1w9m87wxw3n4mf9hk5xw654x759chi7jprisnbyr"; depends=[data_table digest igraph]; };
-  textreadr = derive2 { name="textreadr"; version="0.5.1"; sha256="03j69xn5ligqypkkhj4w0avl4nzn5c87hz3ycz7cwlm2symkwadw"; depends=[antiword curl pdftools readxl rvest textshape xml2]; };
+  textrank = derive2 { name="textrank"; version="0.2.0"; sha256="0s2mnid3dha3nyyc9abhb36vlij4bg0024i9ay4pvvy4l1x947gr"; depends=[data_table digest igraph]; };
+  textreadr = derive2 { name="textreadr"; version="0.7.0"; sha256="081lqqclx2dlrv341178dagd5zajndf27lbrkrv78668cdfk58xr"; depends=[antiword curl data_table pdftools readxl rvest striprtf textshape xml2]; };
   textreg = derive2 { name="textreg"; version="0.1.4"; sha256="0k7hpvvhacz29d3mvnygg6rqmh9f3ghkcp7kjmvv9jnr2ipw2j21"; depends=[NLP Rcpp tm]; };
   textreuse = derive2 { name="textreuse"; version="0.1.4"; sha256="0qfp7ffzb5p3k3wiw8i1zjskni8f38rzkjnss97j9f3vhhb8j4r7"; depends=[assertthat BH digest dplyr NLP Rcpp RcppProgress stringr tidyr]; };
   textshape = derive2 { name="textshape"; version="1.5.0"; sha256="0hvp3mz7j2qkw38jg9cj92ikhyic1c9w8jk07z3vh3f5cm1klvbm"; depends=[data_table slam stringi]; };
   textstem = derive2 { name="textstem"; version="0.1.2"; sha256="172y1hvxhb33syqj5y369aq7fvcyn659cx6abcz7i5na8q1v9v0l"; depends=[dplyr hunspell koRpus lexicon quanteda SnowballC stringi textclean textshape]; };
   textutils = derive2 { name="textutils"; version="0.1-6"; sha256="0xvsd6pfg4kv40l14xcvmirqiq8rmky4s8v8diagzri3a7i45nqn"; depends=[]; };
+  tfdatasets = derive2 { name="tfdatasets"; version="1.5"; sha256="1ik6rzfnjmm54m7s2rvp1bq5jk0k2vl631bz3db3dk639jndiz6a"; depends=[magrittr reticulate rlang tensorflow tidyselect]; };
   tfer = derive2 { name="tfer"; version="1.1"; sha256="19d31hkxs6dc4hvj5495a3kmydm29mhp9b2wp65mmig5c82cl9ck"; depends=[]; };
+  tfestimators = derive2 { name="tfestimators"; version="1.5"; sha256="069j6d5i19yc3nhxrrzwzassv4fv3bdhygxvqqc49nndyf5vwwbj"; depends=[magrittr progress purrr reticulate rlang tensorflow tfruns tibble tidyr tidyselect]; };
   tfplot = derive2 { name="tfplot"; version="2015.12-1"; sha256="1x007j6ibbzfr0kncvsr4c7295jv3c4amg2dpyjvdir9h665nc23"; depends=[tframe]; };
   tframe = derive2 { name="tframe"; version="2015.12-1"; sha256="0k0favda3z6zdg7ykc2nnl28gxz7sfzbyr5pcifiyi984pa2zgfx"; depends=[]; };
   tframePlus = derive2 { name="tframePlus"; version="2016.7-1"; sha256="12xi2xw4pr78n3cppfknpxmjp2263pb4kqj9v412yxwp82rgb6yk"; depends=[tframe timeSeries]; };
-  tfruns = derive2 { name="tfruns"; version="1.0"; sha256="1anizl9vricvhfi3mvr86v7ld8mnpiv9160ffa9cmh7p6g8crxsz"; depends=[base64enc config jsonlite magrittr reticulate rlang rstudioapi tibble tidyselect whisker yaml]; };
+  tfruns = derive2 { name="tfruns"; version="1.3"; sha256="02ib3k3jsmskk5cdxl2nyvnvpn7nlkgjb353z7qlwal0fgrssaln"; depends=[base64enc config jsonlite magrittr reticulate rlang rstudioapi tidyselect whisker yaml]; };
   tgcd = derive2 { name="tgcd"; version="2.0"; sha256="1553f464jpmngdj8fmbjn9cpmrcp4ysgsfx4w7q4pm4csslsqvlr"; depends=[]; };
   tggd = derive2 { name="tggd"; version="0.1.1"; sha256="1izar1b3w148vp2r8gv3vpwfndib8ilxcjxgbfzbxn7q5mr73mwa"; depends=[gsl]; };
-  tglm = derive2 { name="tglm"; version="1.0"; sha256="1gv33jq3bzd5wlrqjvcfb1ax258q9asawkdi64rbj18qp7fg2dbx"; depends=[BayesLogit coda mvtnorm truncnorm]; };
   tgp = derive2 { name="tgp"; version="2.4-14"; sha256="1l3kssjkh5sbrh75qdpmynjfnidgz8vmzq1jml1qm1yfwval8ak1"; depends=[maptree]; };
   tgram = derive2 { name="tgram"; version="0.2-3"; sha256="0vlnry8drq3fqfy8dk50pcwcx9dj657kx6s19fs2b6acigkr4g7w"; depends=[zoo]; };
   thankr = derive2 { name="thankr"; version="1.0.0"; sha256="089ikp85d5ia6a1qzmw8dkgcmz628cibmwfzcpk7m3ii8acxq91w"; depends=[]; };
   themetagenomics = derive2 { name="themetagenomics"; version="0.1.0"; sha256="1p8qyvll6a9yx2akny1087f73r6p5zi6cf1si7b8i786bcs9khwj"; depends=[ggplot2 lda lme4 Matrix plotly Rcpp rstan scales shiny stm]; };
   thermocouple = derive2 { name="thermocouple"; version="1.0.2"; sha256="1rlvhw3i83iq1vibli84gj67d98whvgkxafwpmisva1m4s1bmij4"; depends=[]; };
+  theseus = derive2 { name="theseus"; version="0.1.0"; sha256="1f6vl0m8fcchafn78vrfw610d0sp9rf8kd3q5n7b0zd2yby10dq0"; depends=[dplyr ggplot2 gridExtra magrittr phyloseq ShortRead splancs tidyr tidyverse vegan viridis]; };
   thgenetics = derive2 { name="thgenetics"; version="0.3-4.1"; sha256="05g5rwdpnd1b4h1lay2l1s0ns2q6a7sav8d4zrxaqgzhaafnpxyv"; depends=[]; };
-  thief = derive2 { name="thief"; version="0.2"; sha256="14xl5l7iw0nwbz5zzd00c8ihfclvhfcazvysr8rapsq1j2r5dfck"; depends=[forecast forecTheta ggplot2 hts]; };
+  thief = derive2 { name="thief"; version="0.3"; sha256="12ymkkisg5p0g1gmvlczhp4dc7mirjg55fqqmz2d90673vlg6rfq"; depends=[forecast ggplot2 hts]; };
   threeboost = derive2 { name="threeboost"; version="1.1"; sha256="033vwn42ys81w6z90w5ii41xfihjilk61vdnsgap269l9l0c8gmn"; depends=[Matrix]; };
   threejs = derive2 { name="threejs"; version="0.3.1"; sha256="1s3rdlzy7man6177ycayg6xsh6k8y1r9rdj9yzn3b93j2rs0nxbi"; depends=[base64enc crosstalk htmlwidgets igraph]; };
   threewords = derive2 { name="threewords"; version="0.1.0"; sha256="083y5i4qyl1wj017wy5ywl2yx9wvrpjl9g9k9clvnrbwzbycx2cg"; depends=[httr]; };
@@ -11298,23 +11525,28 @@ in with self; {
   thregI = derive2 { name="thregI"; version="1.0.4"; sha256="0zddd32fnfi98zwq08akkvhkg3c66sj3jii6ap8p1m9a0wg2k2k3"; depends=[Formula survival]; };
   threshr = derive2 { name="threshr"; version="1.0.0"; sha256="1zrhmqpz3k2gyddrzg96yyyc1jffj3aic2dmbidxxc97b9g5hi53"; depends=[revdbayes rust]; };
   thsls = derive2 { name="thsls"; version="0.1"; sha256="18z7apskydkg7iqrs2hgnzby578qsvyd73wx8v4z3aa338lssdi7"; depends=[Formula]; };
-  tibble = derive2 { name="tibble"; version="1.3.4"; sha256="02vn6yqzcvmazy5jaqar3wwbrmh83a1bfgsqgk0hgz38i80zgvm7"; depends=[Rcpp rlang]; };
-  tibbletime = derive2 { name="tibbletime"; version="0.0.2"; sha256="1wg0ysqm5ica34vq64dk496gnfwxcvn3pmfpynvrkykl4f6zx3ra"; depends=[assertthat dplyr lubridate magrittr purrr rlang stringr tibble tidyr]; };
+  tibble = derive2 { name="tibble"; version="1.4.2"; sha256="05svbjkm1xqv56ybjgsqqg2pp8nn6hams1yxcr8aanbhzx9h6rqi"; depends=[cli crayon pillar rlang]; };
+  tibbletime = derive2 { name="tibbletime"; version="0.1.1"; sha256="15rp66p4pgiv7fd0rx1pzqlpsg4i4j5j368cwqm1mf1m4xknz6yy"; depends=[assertthat dplyr glue hms lubridate purrr Rcpp rlang tibble zoo]; };
   tibbrConnector = derive2 { name="tibbrConnector"; version="1.5.1"; sha256="1r58myi7x4hqqvyrphxy4ppa1lnad6x2ginfq2j52ax53zr07ajp"; depends=[RCurl rjson]; };
   tictactoe = derive2 { name="tictactoe"; version="0.2.2"; sha256="1fx8plj5zr04xwk5hfj3zqhcknidxlzya2q14cf0m3y33a86lx42"; depends=[hash]; };
   tictoc = derive2 { name="tictoc"; version="1.0"; sha256="1zp2n8k2ax2jjw89dsri268asmm5ry3ijf32wbca5ji231y0knj7"; depends=[]; };
-  tidyRSS = derive2 { name="tidyRSS"; version="1.2.2"; sha256="1vyn6fr25b0216716sp26rg3gdklqz60m6hffd01m52pvwvhk9qx"; depends=[dplyr httr jsonlite lubridate magrittr purrr testthat tibble xml2]; };
+  tidyLPA = derive2 { name="tidyLPA"; version="0.1.2"; sha256="11xc8lnhs63ykaq2g3jzrp4kz48zz03cvw5s935fvhsp05drf6g5"; depends=[dplyr forcats ggplot2 magrittr mclust purrr readr rlang stringr tibble tidyr]; };
+  tidyRSS = derive2 { name="tidyRSS"; version="1.2.3"; sha256="1m21cwdbhial4h3084vqs0j6zwa267ia75gyjivprqjzcccjaqdp"; depends=[dplyr httr jsonlite lubridate magrittr purrr testthat tibble xml2]; };
   tidyboot = derive2 { name="tidyboot"; version="0.1.0"; sha256="1h997hrwacm91myhy93jrinx0h715da76wm9kwz9nwwzisv62m6k"; depends=[dplyr modelr purrr rlang tidyr]; };
-  tidycensus = derive2 { name="tidycensus"; version="0.3.1"; sha256="0y77g3zllv5am88ml2zk96slfg8lvmmp4jg6w96bp1xzmgkvwg6h"; depends=[dplyr httr jsonlite purrr rappdirs readr rvest sf stringr tidyr tigris units xml2]; };
+  tidycensus = derive2 { name="tidycensus"; version="0.4.1"; sha256="1ay6qw25r809fpgs0fsvblgsrpi91ph82mm2w21vj59gba1bkr71"; depends=[dplyr httr jsonlite purrr rappdirs readr rvest sf stringr tidyr tigris units xml2]; };
   tidygenomics = derive2 { name="tidygenomics"; version="0.1.0"; sha256="0n6km2zhdmbgacn6rzamrn506d9y3sl6yp2q6fd9x7kzgz09aq4n"; depends=[dplyr fuzzyjoin IRanges purrr Rcpp tidyr]; };
-  tidygraph = derive2 { name="tidygraph"; version="1.0.0"; sha256="1z0jmhwj3m1xk9zmds2riyqmq189716j5qi6ijgf3xni3n25c0m0"; depends=[dplyr igraph magrittr R6 Rcpp rlang tibble tidyr]; };
+  tidygraph = derive2 { name="tidygraph"; version="1.1.0"; sha256="1cqmii1pia5s8cj1hfm5jh4qgg9dn65dcb666bqfhq51nzgwy6b4"; depends=[dplyr igraph magrittr R6 Rcpp rlang tibble tidyr]; };
+  tidyhydat = derive2 { name="tidyhydat"; version="0.3.2"; sha256="0an22qpxz5sjg4grh54swp62px5428rk553flz73h0islp6wqnq6"; depends=[cli crayon DBI dbplyr dplyr httr lubridate rappdirs readr RSQLite tibble tidyr]; };
+  tidyinftheo = derive2 { name="tidyinftheo"; version="0.2.1"; sha256="1lh1smhnfg5x35ans3rlj6nvrqwkaiac3ycy7r8wz5h9fhlri3pg"; depends=[dplyr ggplot2 infotheo magrittr purrr rlang tibble tidyselect tidyverse]; };
   tidyposterior = derive2 { name="tidyposterior"; version="0.0.1"; sha256="09q2j6kjwqphdzi60w26mlax9fnmndw7s3fsxfcj0pjjl8688w52"; depends=[broom dplyr ggplot2 purrr rlang rsample rstanarm tibble tidyr]; };
-  tidyquant = derive2 { name="tidyquant"; version="0.5.3"; sha256="1vvmx0l5vd434gjsqd19vlnzk0hxgh82b1dsf2zwshc9hni1b75l"; depends=[broom curl devtools dplyr ggplot2 httr lazyeval lubridate magrittr PerformanceAnalytics purrr Quandl quantmod readr rvest scales stringr tibble tidyr tidyverse timeSeries timetk tseries TTR XLConnect xml2 xts zoo]; };
-  tidyr = derive2 { name="tidyr"; version="0.7.2"; sha256="1700fry2b3d3ksj7x2f09xl6agjrdnx1rqsc1r8gvzsp5cpflb06"; depends=[dplyr glue magrittr purrr Rcpp rlang stringi tibble tidyselect]; };
+  tidypredict = derive2 { name="tidypredict"; version="0.1.0"; sha256="1dvyzckndn3hjfylp38mi27lq4f9w87ra5rx5r177qni8ybifiyz"; depends=[dplyr purrr rlang tibble tidyr]; };
+  tidyquant = derive2 { name="tidyquant"; version="0.5.4"; sha256="1ip3vivn6x0ip2y4izq4cz5lh31ygsymkvbb4jqvb8dj5wywr2hq"; depends=[alphavantager broom curl devtools dplyr ggplot2 httr lazyeval lubridate magrittr PerformanceAnalytics purrr Quandl quantmod readr rvest scales stringr tibble tidyr tidyverse timeSeries timetk tseries TTR xml2 xts zoo]; };
+  tidyr = derive2 { name="tidyr"; version="0.8.0"; sha256="1qjpbj1a2vw6nw4hdb6fgassnrxrdpqwf9a8i6wqnv3wxvjb6zqb"; depends=[dplyr glue magrittr purrr Rcpp rlang stringi tibble tidyselect]; };
   tidyselect = derive2 { name="tidyselect"; version="0.2.3"; sha256="0b0w30yq30c7bwpaghp3hp0nncqwcmvrra9j58fhx9jihay3l68c"; depends=[glue purrr Rcpp rlang]; };
   tidystats = derive2 { name="tidystats"; version="0.1"; sha256="0dy4yqdc0y8pmix29100x80q828rapnq9y3qn2p6rs763c7canmr"; depends=[dplyr magrittr purrr readr tibble tidyr]; };
-  tidystringdist = derive2 { name="tidystringdist"; version="0.1.0"; sha256="0244xasr2jld6acfgayqj9ks366gdd8mk0hws6rm9w380ihzw408"; depends=[rlang stringdist]; };
-  tidytext = derive2 { name="tidytext"; version="0.1.5"; sha256="1973dawvjznn197hvf3malabp5gck6j4isbq0kzjajc3y0akfcvn"; depends=[broom dplyr hunspell janeaustenr Matrix purrr rlang stringr tokenizers]; };
+  tidystringdist = derive2 { name="tidystringdist"; version="0.1.2"; sha256="1jk5yqkjf33arbbfgfzk7ym943gy95n3yncybmvwbjsff07qpmaw"; depends=[attempt dplyr magrittr purrr rlang stringdist]; };
+  tidytext = derive2 { name="tidytext"; version="0.1.7"; sha256="1pvf46z1jiwi1j0z917mml1cg9527zkdckh8h3d1ks4wawz099a9"; depends=[broom dplyr hunspell janeaustenr Matrix purrr rlang stopwords stringr tokenizers]; };
+  tidytree = derive2 { name="tidytree"; version="0.1.6"; sha256="0x9lwgnsz7iz1xdaiz7q9cff1v7888fi5yb6d65lqcgzlc2ipxbz"; depends=[ape dplyr lazyeval magrittr tibble]; };
   tidyverse = derive2 { name="tidyverse"; version="1.2.1"; sha256="0yy3fkjksgcn6wkbgsb0pbnmsyqs4m01mziqafhig578nixs4rxd"; depends=[broom cli crayon dbplyr dplyr forcats ggplot2 haven hms httr jsonlite lubridate magrittr modelr purrr readr readxl reprex rlang rstudioapi rvest stringr tibble tidyr xml2]; };
   tidyxl = derive2 { name="tidyxl"; version="1.0.0"; sha256="1bsvxsz24qbk9wca8kh4qrb4fi22i49vpciq1pm5c48jb11bjb6b"; depends=[piton Rcpp]; };
   tiff = derive2 { name="tiff"; version="0.1-5"; sha256="0asf2bws3x3yd3g3ixvk0f86b0mdf882pl8xrqlxrkbgjalyc54m"; depends=[]; };
@@ -11324,8 +11556,8 @@ in with self; {
   tigger = derive2 { name="tigger"; version="0.2.11"; sha256="1kbqlfr3lsiiv0l7dzahna706zb4mx0gfx91220n2ckfc81pyrv5"; depends=[alakazam doParallel dplyr foreach ggplot2 iterators lazyeval tidyr]; };
   tightClust = derive2 { name="tightClust"; version="1.0"; sha256="0psyzk6d33qkql8v6hzkp8mfwb678r95vfycz2gh6fky7m5k3yyz"; depends=[]; };
   tigreBrowserWriter = derive2 { name="tigreBrowserWriter"; version="0.1.4"; sha256="0c733mb2fzskrfa4664w6psp80wdr5hc7f9rp516y59a8rr3xzr0"; depends=[DBI RSQLite]; };
-  tigris = derive2 { name="tigris"; version="0.5.3"; sha256="0ic4l91dd97gmbqm6jgwkx34gsna6asaq14prmjq8y8n4bw7dkvf"; depends=[dplyr httr magrittr maptools rappdirs rgdal rgeos sf sp stringr uuid]; };
-  tikzDevice = derive2 { name="tikzDevice"; version="0.10-1"; sha256="1fjxzmp9wrf9bigzb4hkp2cb64sd6x4yhrjd6gryw17cqrblhicg"; depends=[filehash png]; };
+  tigris = derive2 { name="tigris"; version="0.6.2"; sha256="0m4zramm38111rzifh0lqyly2dgdfgg5y39sns2rp8x1n0b69bc2"; depends=[dplyr httr magrittr maptools rappdirs rgdal sf sp stringr uuid]; };
+  tikzDevice = derive2 { name="tikzDevice"; version="0.10-1.2"; sha256="1rwxmjwmjr1dssg9dx7rc6nz11225pz2ac9rhp8581slwzw79icl"; depends=[filehash png]; };
   tileHMM = derive2 { name="tileHMM"; version="1.0-7"; sha256="1ks4b6h15982jh3ls9fz8hq9ac1wf5hfjsvdqcmnba8n3m5zm651"; depends=[corpcor st]; };
   tilegramsR = derive2 { name="tilegramsR"; version="0.2.0"; sha256="11cnyvlghg8z7lr9ahzsjpyjrqnxqs77wdcydqvavrsqj745xvi2"; depends=[sf sp]; };
   tilting = derive2 { name="tilting"; version="1.1.1"; sha256="0srvxjv3sg35n7f8pam45ny1z1dxwqjkrz9d91hf67a3fi34f5gk"; depends=[mvtnorm]; };
@@ -11339,21 +11571,22 @@ in with self; {
   timelineR = derive2 { name="timelineR"; version="0.1.0"; sha256="1a2pdy5b9nca66khydrb50yzjglr78lxrgzisw6bp2simk5cix51"; depends=[dplyr futile_logger ggplot2 gtable lubridate mtconnectR stringr]; };
   timelineS = derive2 { name="timelineS"; version="0.1.1"; sha256="076w8ckzzl59bc1gnwjgdwynnz86320hyfmzb0k26hl3k13jlmxs"; depends=[dplyr ggplot2 lubridate magrittr]; };
   timeordered = derive2 { name="timeordered"; version="0.9.8"; sha256="1j0x2v22ybyl3l9r3aaz5a3bxh0zq81rbga9gh63zads2xy5axmf"; depends=[igraph plyr]; };
-  timereg = derive2 { name="timereg"; version="1.9.1"; sha256="1rm3b8i3vrajd50rfm39hlyz1idxxwlj73zga2q8gm0md75034rv"; depends=[lava numDeriv survival]; };
+  timereg = derive2 { name="timereg"; version="1.9.2"; sha256="0ddckk8vrfkk4kwlrjms6niry6g6c8dz0yf96z2kq03jgs06kfdh"; depends=[lava numDeriv survival]; };
   timesboot = derive2 { name="timesboot"; version="1.0"; sha256="1ixmcigi1bf42np93md8d3w464papg9hp85v0c3hg3vl4nsm2bji"; depends=[boot]; };
   timeseriesdb = derive2 { name="timeseriesdb"; version="0.2.1"; sha256="0150zs8c8184jzry33aki21prmpnxp3rclp84q6igwxi4grdhlr0"; depends=[DBI reshape2 RJSONIO RPostgreSQL shiny xts zoo]; };
   timetk = derive2 { name="timetk"; version="0.1.0"; sha256="0z4zb00c4xbjn3ppz6ypcab2ahkr76mj6v68yfxkjb233cb18641"; depends=[devtools dplyr forecast lazyeval lubridate padr purrr readr stringi tibble tidyr xts zoo]; };
-  timetools = derive2 { name="timetools"; version="1.12.3"; sha256="03zppxz9ck5va3bxrszd1wfpbwxhyilbs592kkxxm4q819xgib5m"; depends=[]; };
+  timetools = derive2 { name="timetools"; version="1.14"; sha256="13jchgd9fc8hxj74wm1kg4rwcng4yxblkq04i33djsqghgb5f9mj"; depends=[]; };
   timetree = derive2 { name="timetree"; version="1.0"; sha256="1fpdp6mkwm67svqvkfflvqxn52y2041zl09rxrms28ybbd5f84c0"; depends=[phangorn XML]; };
   timevis = derive2 { name="timevis"; version="0.4"; sha256="08caa5gilh1c0z41lm3ghf6cpnlsdjfm1v7ha73jxv1655kznmpx"; depends=[htmltools htmlwidgets jsonlite magrittr rmarkdown shiny]; };
   timma = derive2 { name="timma"; version="1.2.1"; sha256="1pypk0pwkhyilh1hsn8hasia1hf6hbskj0xw6vas03k19b6fjnli"; depends=[QCA Rcpp RcppArmadillo reshape2]; };
   timsac = derive2 { name="timsac"; version="1.3.5"; sha256="1p2fwizq95fhbw0jk23sy0qgkkkab0iy37sw71krpm0dzrgi6lj0"; depends=[]; };
   tinsel = derive2 { name="tinsel"; version="0.0.1"; sha256="0n1x0cf4x6cq1yks0444nxd9snga4m6inc5lfvb7k96fzjb3xgbp"; depends=[]; };
-  tint = derive2 { name="tint"; version="0.0.4"; sha256="16648hqg5gqb57f6bz2yi0wicmw1cx5hk99ra17igjvf1bs77h7j"; depends=[htmltools knitr rmarkdown]; };
+  tint = derive2 { name="tint"; version="0.0.5"; sha256="1283rik1ynnhy40lm1dipmwzihsy0pdn383k9m1yczl2fqf1qcfi"; depends=[htmltools knitr rmarkdown]; };
   tinyProject = derive2 { name="tinyProject"; version="0.5"; sha256="10sllhjcla4pfgp5n1y5vi318q9bcy82j88rx3k1sgzmbq1nc1c2"; depends=[brew devtools]; };
+  tinytex = derive2 { name="tinytex"; version="0.3"; sha256="0mhxlr4709mca9jshnah5i7yjyy6k12s933619p7p9c8nbqj39cn"; depends=[]; };
   tipom = derive2 { name="tipom"; version="1.0.2-1"; sha256="1gdfv0g5dw742j6ycmi0baqh6xcchp3yf2n1g8vn7jmqgz5mlhdr"; depends=[]; };
   tipr = derive2 { name="tipr"; version="0.1.1"; sha256="138xmkfad0xjrmr9v3ladbwsyknyad27wxcav03n6f72plhxmxb6"; depends=[broom purrr tibble]; };
-  tis = derive2 { name="tis"; version="1.32"; sha256="1qiywhsqgshs5v7780wlyic9ykxdpf26rsywakmb4y6fc3pjrhi7"; depends=[]; };
+  tis = derive2 { name="tis"; version="1.34"; sha256="01bpl8q2n49wpr2gghkcv1zf16b3375xa71mv0q7wwn0da3n7m0n"; depends=[]; };
   titan = derive2 { name="titan"; version="1.0-16"; sha256="0x30a877vj99z3fh3cw9762j5ci56964j2466xfbwcywhn9njz5r"; depends=[boot lattice MASS]; };
   titanic = derive2 { name="titanic"; version="0.1.0"; sha256="0mdmh0ciwfig00847bmvp50cyvj8pra6q4i4vdg7md19z5rjlx3j"; depends=[]; };
   titrationCurves = derive2 { name="titrationCurves"; version="0.1.0"; sha256="0z127sihd262mdik46sq9vcf05s7jsqmkpm3p4d779viw74bl768"; depends=[]; };
@@ -11362,7 +11595,7 @@ in with self; {
   tlemix = derive2 { name="tlemix"; version="0.1.3"; sha256="0c4mvdxlhbmyxj070xyipx4c27hwxlb3c5ps65ipm6gi8v8r6spj"; depends=[]; };
   tlm = derive2 { name="tlm"; version="0.1.5"; sha256="1iw08pa70nb25fnv64834s5c8vl456a2rcng7x6v9vs5q37610g6"; depends=[boot]; };
   tlmec = derive2 { name="tlmec"; version="0.0-2"; sha256="1gak8vxmfjf05bhaj6lych7bm8hgav1x3h14k2ra7236v82rqbw7"; depends=[mvtnorm]; };
-  tm = derive2 { name="tm"; version="0.7-2"; sha256="01j3k9hkd7w8iy1i5k59gnr69h49zv933c7vd59xckjsnh756nz2"; depends=[BH NLP Rcpp slam xml2]; };
+  tm = derive2 { name="tm"; version="0.7-3"; sha256="048wrk1grd3r95a46aaxrwsgpj1l5afbzda8434b1zr1wr8y3hzk"; depends=[BH NLP Rcpp slam xml2]; };
   tm_plugin_alceste = derive2 { name="tm.plugin.alceste"; version="1.1"; sha256="0wid51bbbx01mjfhnaiv50vfyxxmjxw8alb73c1hq9wlsh3x3vjf"; depends=[NLP tm]; };
   tm_plugin_dc = derive2 { name="tm.plugin.dc"; version="0.2-8"; sha256="0z843i2wlmx75748p95jz3j45d9bzmlmqa3awgya24k7bdhpd6kd"; depends=[DSL NLP slam tm]; };
   tm_plugin_europresse = derive2 { name="tm.plugin.europresse"; version="1.4"; sha256="03qi9rkfwgjvir4cjpi9imc8zaldvan42v9lqfr5d6zhr0ajy6wx"; depends=[NLP tm XML]; };
@@ -11370,11 +11603,12 @@ in with self; {
   tm_plugin_lexisnexis = derive2 { name="tm.plugin.lexisnexis"; version="1.3.1"; sha256="15k4bzx1p271yzskkijlf2pm6m7pb5dqxmfab9rhwynllszv96if"; depends=[ISOcodes NLP tm XML]; };
   tm_plugin_mail = derive2 { name="tm.plugin.mail"; version="0.1"; sha256="0ca2w2p5zv3qr4zi0cj3lfz36g6xkgkbck8pdxq5k65kqi5ndzyp"; depends=[NLP tm]; };
   tm_plugin_webmining = derive2 { name="tm.plugin.webmining"; version="1.3"; sha256="1694jidf01ilyk286q43bjchh1gg2fk33a2cwsf5jxv7jky3gl7h"; depends=[boilerpipeR NLP RCurl RJSONIO tm XML]; };
-  tmap = derive2 { name="tmap"; version="1.11"; sha256="0z2nlhpn459srqpzchygc0sc9in5pr91v4l5x8ipyqd14y9ka1zw"; depends=[classInt htmltools htmlwidgets leaflet mapview raster RColorBrewer rgdal rgeos sp spdep tmaptools]; };
-  tmaptools = derive2 { name="tmaptools"; version="1.2-2"; sha256="0kp4d1hv3rk96lw8c5nflvkjp9874slrbfmlqg6ks0zk3c8wi93r"; depends=[classInt dichromat geosphere KernSmooth magrittr osmar raster RColorBrewer rgdal rgeos rmapshaper sp spdep XML]; };
+  tmap = derive2 { name="tmap"; version="1.11-1"; sha256="0day8hy210a2v2ps9pqcv4mnlx39h7dcj47hkyjsm76qlcdccv3l"; depends=[classInt htmltools htmlwidgets leaflet mapview raster RColorBrewer rgdal rgeos sp spdep tmaptools]; };
+  tmaptools = derive2 { name="tmaptools"; version="1.2-3"; sha256="08m8dir5k7da72fp3hcsb055alwzpbxr2f9lxmhdbk991bmwacjr"; depends=[classInt dichromat geosphere KernSmooth magrittr osmar raster RColorBrewer rgdal rgeos rmapshaper sp spdep XML]; };
+  tmbstan = derive2 { name="tmbstan"; version="1.0.0"; sha256="01x1nw0mlbpsldrd6hx2g040d9slrhk7hm2pm1v7pci3vxgbpgy9"; depends=[BH Rcpp RcppEigen rstan StanHeaders TMB]; };
   tmcn = derive2 { name="tmcn"; version="0.2-8"; sha256="0msgjz32yizl7kfy33mzxjgfj7q3pd0wdly0xzvcmkc254q41bq7"; depends=[]; };
   tmg = derive2 { name="tmg"; version="0.3"; sha256="0yqavibinzsdh85izzsx8b3bb9l36vzkp5a3bdwdbh410s62j68a"; depends=[Rcpp RcppEigen]; };
-  tmle = derive2 { name="tmle"; version="1.2.0-5"; sha256="06pan7kf1ffs587kayrscqcp4d613ismpzxp8fhfzga02vzvc3a2"; depends=[SuperLearner]; };
+  tmle = derive2 { name="tmle"; version="1.3.0"; sha256="0krnf2mzxmcb105gsx1b0gpc009lv27s0brh6sa1sm87a76p6dqd"; depends=[SuperLearner]; };
   tmle_npvi = derive2 { name="tmle.npvi"; version="0.10.0"; sha256="00jav1ql3lv18wh9msxnjvz36z2ds44fdi6lrp1pfphh1in4vdcl"; depends=[geometry MASS Matrix R_methodsS3 R_oo R_utils]; };
   tmlenet = derive2 { name="tmlenet"; version="0.1.0"; sha256="1pg9w7yci9j0m1cxi0nwdpp6jwap0b7ql4xkh25kjbq3w5r8w8pr"; depends=[assertthat data_table Matrix R6 Rcpp simcausal speedglm stringr]; };
   tmod = derive2 { name="tmod"; version="0.31"; sha256="1qqzngqnj4vk170ild34fpzsnpb1125zisf6xx5hp8q899z88q81"; depends=[beeswarm pca3d plotwidgets tagcloud XML]; };
@@ -11386,19 +11620,21 @@ in with self; {
   tnet = derive2 { name="tnet"; version="3.0.14"; sha256="05cc6jrkjbwxzmgzq30h63xzhlgq8f0l3wx2q54vrv0wpvlvfphn"; depends=[igraph survival]; };
   toOrdinal = derive2 { name="toOrdinal"; version="1.0-0.0"; sha256="1y46rcm6v2c5n71hdf5rgsgvy913wiazmml60mlxqb70dvz42649"; depends=[crayon testthat]; };
   toaster = derive2 { name="toaster"; version="0.5.5"; sha256="0ga4l3zp422scrgvz701rjznn013vhsbp4gh7v1inqp7kpxafky9"; depends=[foreach GGally ggmap ggplot2 ggthemes memoise network plyr RColorBrewer reshape2 RODBC scales slam wordcloud]; };
+  togglr = derive2 { name="togglr"; version="0.1.3"; sha256="033d4mcl2w7nbjmaa5bc28skd63x34k4k4ib94nf11iwdj7bipkw"; depends=[assertthat dplyr getPass glue httr jsonlite keyring lubridate magrittr prettyunits purrr rstudioapi]; };
   tokenizers = derive2 { name="tokenizers"; version="0.1.4"; sha256="1qcsmcd74i39wql9p49g3pzc4flpi8jq9sxia5mcdx054viijgk9"; depends=[Rcpp SnowballC stringi]; };
   tolBasis = derive2 { name="tolBasis"; version="1.0"; sha256="0g4jdwklx92dffrz38kpm1sjzmvhdqzv6mj6hslsjii6sawiyibh"; depends=[lubridate polynom]; };
   tolerance = derive2 { name="tolerance"; version="1.3.0"; sha256="17qh4ad1f3fbcpwlxxqh8qr9bnwjcl4yxk0l3fkbr6b2l4rc5p86"; depends=[rgl]; };
+  toolmaRk = derive2 { name="toolmaRk"; version="0.0.1"; sha256="0pdr8lq4c11ia03v68lbfq38p3qp770mbj0nsbjsgbqi0pv9i1vx"; depends=[dplyr ggplot2 plyr reshape2]; };
   topicmodels = derive2 { name="topicmodels"; version="0.2-7"; sha256="16qa27pw19an6snqsqmgx439jqjjm8fx2lva3pnz5rd33xf701yc"; depends=[modeltools slam tm]; };
-  topmodel = derive2 { name="topmodel"; version="0.7.2-2"; sha256="1nqa8fnpxcn373v6qcd9ma8qzcqwl2md347yql3c8bpqlm9ggz16"; depends=[]; };
+  topmodel = derive2 { name="topmodel"; version="0.7.3"; sha256="15w9id90d6l0i0ji3ln3sxnpispb6pgabk4waysqn0nh6y4lfdgb"; depends=[]; };
   topologyGSA = derive2 { name="topologyGSA"; version="1.4.6"; sha256="0vas7qab5a86jb277ql63qjvfvx7iqqbcrwky7iyr0s8p8p794ia"; depends=[fields graph gRbase qpgraph]; };
   topsis = derive2 { name="topsis"; version="1.0"; sha256="056cgi684qy2chh1rvhgkxwhfv9nnfd7dfzc05m24gy2wyypgxj3"; depends=[]; };
   tosls = derive2 { name="tosls"; version="1.0"; sha256="03nqwahap504yvcksvxdhykplbzmf5wdwgpzm7svn8bymdc472v2"; depends=[Formula]; };
+  totalcensus = derive2 { name="totalcensus"; version="0.3.0"; sha256="0i7srsfhskfcq7fdc3sq2rq2p6x508pwgbig86l92zki3ljm7qgs"; depends=[data_table magrittr purrr stringr]; };
   touch = derive2 { name="touch"; version="0.1-3"; sha256="1zzc4h6y0xmr3p7jl0vlvn4yswxz5akgvz8laxgmjgqzk926g9jl"; depends=[stringr]; };
   tourr = derive2 { name="tourr"; version="0.5.5"; sha256="12293kp36kz056zd3fnsaf2gy4g8mcs79ws0vgbs7b0hx09sy9vp"; depends=[]; };
   tourrGui = derive2 { name="tourrGui"; version="0.4"; sha256="1g9928q3x9rrd9k3k84r201wss3vjd2pngvbaflk5dqh9yf75jpq"; depends=[Cairo colorspace gWidgets RGtk2 tourr]; };
   toxboot = derive2 { name="toxboot"; version="0.1.1"; sha256="0sw0mxhcq5k11swlhfpn6xk0nfsambh2yx1721zx75lya27wkmq1"; depends=[data_table tcpl]; };
-  toxplot = derive2 { name="toxplot"; version="0.1.0"; sha256="0sl3ihagfxa7xl2l7xsrmvp6j1pxlrsqcljmwpwrn0sd5sdwyjm0"; depends=[dplyr ggplot2 ggthemes tcpl tidyr]; };
   toxtestD = derive2 { name="toxtestD"; version="2.0"; sha256="0b7hmpfhwg626r8il12shni0kw94cqnbj49y4vfh8gn98x1s6m48"; depends=[]; };
   tpAUC = derive2 { name="tpAUC"; version="2.1.1"; sha256="0wix9qwcidj7xfqhh7bmrpnadd9qlkvg3515gaamdxkjbz2kyydc"; depends=[pROC]; };
   tpe = derive2 { name="tpe"; version="1.0.1"; sha256="0zsa8vb4qmln3sb4lplv43lh50yys9vfd3rxfp6qxqqjxivd0xsh"; depends=[]; };
@@ -11406,13 +11642,14 @@ in with self; {
   tracer = derive2 { name="tracer"; version="1.0.0"; sha256="1jdh4ljcz7d0w2y5miggqkvv397jdx7fn108hbjw93af2gnh698q"; depends=[clisymbols crayon prettycode]; };
   tracheideR = derive2 { name="tracheideR"; version="0.1.1"; sha256="1x1jwzgs2aqb3k17mm9mhfhnbwcmilhkjaz9rl40rcg84xjqdrpl"; depends=[tgram]; };
   track = derive2 { name="track"; version="1.1.9"; sha256="1d0hab7xyayyhyyrbv8nvpka1kzry4yx10fg8aqwkca3nm7n2q3c"; depends=[]; };
-  trackdem = derive2 { name="trackdem"; version="0.2"; sha256="0gvra57bilx504lijp7gr7z6alkivsnpqi2lbbvcp1dchzaf4gwi"; depends=[MASS neuralnet png raster Rcpp RcppArmadillo SDMTools]; };
+  trackdem = derive2 { name="trackdem"; version="0.3.1"; sha256="10qq9217mpd4abhkwsh4yjzpi06qpqa5rnwhxls6yzmymf9apngl"; depends=[MASS neuralnet png raster Rcpp RcppArmadillo SDMTools shiny]; };
   trackeR = derive2 { name="trackeR"; version="1.0.0"; sha256="0z200jlkgcdxwss0ckbh3vqcfw56fi7pivr9vzf4rkwyf2n6v25s"; depends=[fda ggmap ggplot2 gridExtra gtable jsonlite leaflet raster RSQLite scam XML zoo]; };
   tractor_base = derive2 { name="tractor.base"; version="3.1.0"; sha256="0d3hkxqygyh02v63wny32zdxpsn6m6q8i1630zl1mhrbvq3kmqr5"; depends=[ore reportr]; };
   traitr = derive2 { name="traitr"; version="0.14"; sha256="1pkc8wcq55229wkwb54hg9ndbhlxziv51n8880z6yq73zac1hbmf"; depends=[digest gWidgets proto]; };
   traits = derive2 { name="traits"; version="0.3.0"; sha256="155y8j69214xxi1bfk07k30zlpm3q6fmz7ydhnkvw0kv4l0i5pc5"; depends=[crul data_table hoardr httr jsonlite readr rvest taxize tibble xml2]; };
   traj = derive2 { name="traj"; version="1.2"; sha256="0mq6xdbxjqjivxyy7cwaghwmnmb5pccrah44nmalssc6qfrgys4n"; depends=[cluster GPArotation NbClust pastecs psych]; };
   trajectories = derive2 { name="trajectories"; version="0.1-4"; sha256="0vwfbx5s8ywasxwv8cld4s6r96vlyknxipp49rsfpqn94nawhwnx"; depends=[lattice sp spacetime]; };
+  trajr = derive2 { name="trajr"; version="1.0.0"; sha256="1q17lgwgxn9j3ym1vikrnnyqf61ri3vl7jqq3f1fvy2280nac0s8"; depends=[plotrix signal]; };
   tranSurv = derive2 { name="tranSurv"; version="1.1-4"; sha256="1vsp12x4h0s1lba1kf7n0v71kgm1dz6cjfp8lffm4ps80nahs63l"; depends=[rootSolve SQUAREM survival]; };
   transcribeR = derive2 { name="transcribeR"; version="0.0.0"; sha256="0y2kxg2da71i962fhsjxsr2ic3b31fmffhj3gg97b0nykfpcviib"; depends=[httr]; };
   translate = derive2 { name="translate"; version="0.1.2"; sha256="1w0xrg1xxwfdanlammmixf06hwq700ssbjlc3cfigl50p87dbc5x"; depends=[functional lisp RCurl RJSONIO]; };
@@ -11425,7 +11662,6 @@ in with self; {
   tree = derive2 { name="tree"; version="1.0-37"; sha256="091297qhvqhgjmnyr96jkwaghz8dkbf03rnhwfhks8bsgax6jl13"; depends=[]; };
   treeClust = derive2 { name="treeClust"; version="1.1-6"; sha256="07cw8mnfrkw733ga3aq4am1pj50g8vk0rw6b3lflnb4wdhm2fgbi"; depends=[cluster rpart]; };
   treeDA = derive2 { name="treeDA"; version="0.0.2"; sha256="0ldk7g0bfs8y0znivhj8db5si7glxawicc5zvapbf8d9djlaxxga"; depends=[ggplot2 gtable Matrix mvtnorm phyloseq reshape2 sparseLDA]; };
-  treeHFM = derive2 { name="treeHFM"; version="1.0.3"; sha256="10pyvyyz9ia4dpj8zkil56ipbvbks5xh0n9hkdy0hcinsyq0ba29"; depends=[mclust]; };
   treebase = derive2 { name="treebase"; version="0.1.4"; sha256="1bx31jahb0wy2g8wl1z71vy659lfi8fq1sbbaxvyixzcwymix1wq"; depends=[ape httr RCurl XML]; };
   treeclim = derive2 { name="treeclim"; version="2.0.0"; sha256="0hiba5xc6rp5zzka31k5klmlllpgbnla4pm920zk12jxn796953l"; depends=[abind boot ggplot2 lmodel2 lmtest np plyr Rcpp RcppArmadillo]; };
   treecm = derive2 { name="treecm"; version="1.2.2"; sha256="0vrawg4vvy270dn20gb2k99xi4q89l4mjz0mm7ikpz8wxqypzq2l"; depends=[plyr]; };
@@ -11435,15 +11671,14 @@ in with self; {
   treemapify = derive2 { name="treemapify"; version="2.4.0"; sha256="1cg8jwlls3r3kjlmmxcm9id2spsn5ggsjrw0826ih2khdlnjc0jy"; depends=[ggfittext ggplot2 plyr]; };
   treeperm = derive2 { name="treeperm"; version="1.6"; sha256="0mz7p9khrsq4dbkijymfvlwr01y4fvs0x6si4x5xid16s2zsnmm4"; depends=[]; };
   treeplyr = derive2 { name="treeplyr"; version="0.1.3"; sha256="00fkmmzivwy603grfbwdabsik1swkyba7sbwcjzxbgsmx3s472g6"; depends=[ape dplyr geiger lazyeval phytools Rcpp]; };
-  treespace = derive2 { name="treespace"; version="1.0.0"; sha256="1dc98p5jf9qyr31xa7h7v2zrjmhd3jlzrh2cpmnmhbpfm1cviskj"; depends=[ade4 adegenet adegraphics adephylo ape combinat distory fields htmlwidgets MASS phangorn Rcpp RLumShiny scatterD3 shiny shinyBS]; };
+  treespace = derive2 { name="treespace"; version="1.1.1"; sha256="112qic2wxvkcd533hs6bvzzbb7abpylgm9m2bqp1mirrngz3gxp8"; depends=[ade4 adegenet adegraphics adephylo ape combinat distory fields htmlwidgets MASS phangorn phytools Rcpp RLumShiny scatterD3 shiny shinyBS]; };
   treethresh = derive2 { name="treethresh"; version="0.1-11"; sha256="1fksyn9mycr6dpw1yh5b3fa7fk7ndz7q39174daplm55jbrz1dr5"; depends=[EbayesThresh wavethresh]; };
   trelliscope = derive2 { name="trelliscope"; version="0.9.8"; sha256="1581ss5c3f7mnv6s3p9f8kfwnks0l80kxwpxv9mq61w3lf9fksm2"; depends=[base64enc curl data_table datadr digest DistributionUtils ggplot2 hexbin htmltools htmlwidgets jpeg jsonlite lattice png rsconnect shiny]; };
   trelloR = derive2 { name="trelloR"; version="0.1.0"; sha256="0d549yw9pfxs8a3q716z08fzg68bkm5l09cv5iqqkm4gyasrxsf4"; depends=[dplyr httr jsonlite]; };
-  trend = derive2 { name="trend"; version="1.0.1"; sha256="1phxl3d7swasgbr1k8w57lsgvqbl8ap4d351x8an2y904ii6gya9"; depends=[extraDistr]; };
+  trend = derive2 { name="trend"; version="1.1.0"; sha256="06yifqbsvxbmk5gld4z2nnyhf59v8ks5xjwacmb25mv9r6bn388b"; depends=[extraDistr]; };
   trialr = derive2 { name="trialr"; version="0.0.1"; sha256="0v274a4w9pamlp9y7xs8hw783ib7z3p19gx94dciyvgm2wj9h7di"; depends=[BH gtools Rcpp RcppEigen rstan rstantools StanHeaders]; };
   triangle = derive2 { name="triangle"; version="0.11"; sha256="0983bvywbyl0sms29j1hby2qy6p984vy4r0q1awh1f8gr01bbk5b"; depends=[]; };
   triangulation = derive2 { name="triangulation"; version="0.5.0"; sha256="1zp09g0s0qpqgz2k6jx32pswh2zqyyd0b62lf1dx1p46m28dafkn"; depends=[]; };
-  trib = derive2 { name="trib"; version="1.2.0"; sha256="0bvz1cvi2fx40b5rdv4gfama11dn20rz4506k4fjsny32yswpqyw"; depends=[zoo]; };
   tribe = derive2 { name="tribe"; version="0.1.6"; sha256="0sx6hyfyg8x0vxq4l4gvv5kb8afrbjp3qk3s48l85vf5v1chwnhf"; depends=[bazar dplyr lazyeval magrittr rlist rstudioapi]; };
   triebeard = derive2 { name="triebeard"; version="0.3.0"; sha256="1hqyz57gph02c9fdc07lxz113bbklif3g18sw8jan6pakhhdc7dz"; depends=[Rcpp]; };
   trifield = derive2 { name="trifield"; version="1.1"; sha256="0xk48fkd5xa3mfn3pwdya0ihpkwnh20sgj3rc7fmzjil47kqscvy"; depends=[]; };
@@ -11455,9 +11690,10 @@ in with self; {
   tripEstimation = derive2 { name="tripEstimation"; version="0.0-44"; sha256="1ylpyzlqr6l5haxq4icnlxw6vgvc2lsfz5sm2wqqm4m6h3p0i6s6"; depends=[lattice mgcv rgdal sp zoo]; };
   tripack = derive2 { name="tripack"; version="1.3-8"; sha256="0pf707z6xysxvcs508nadga3mglpvmfk6r061qda8acn58ll1cvb"; depends=[]; };
   triversity = derive2 { name="triversity"; version="1.0"; sha256="1bar2bpy8jvj91jmzzdwy6rlvirsbxrzqnx4r825irqhc69gc53r"; depends=[data_tree Matrix]; };
-  tropAlgebra = derive2 { name="tropAlgebra"; version="0.1.0"; sha256="1pimvcnmj9gg454vxgx0cp8lip89f704w5v6pmlpfj34s7h88474"; depends=[]; };
+  tropAlgebra = derive2 { name="tropAlgebra"; version="0.1.1"; sha256="1idvhxhw2f6z8iq0nfdj6jmzy8913vid84rvln6rx2dkzw3s9wnl"; depends=[]; };
   tropr = derive2 { name="tropr"; version="0.1.2"; sha256="1nm97sqmj4nfy7h8z58gmd9ipyrkw6skh2wx2g3ivm9pn3m50bwl"; depends=[digest httr magrittr rvest stringr xml2]; };
   trotter = derive2 { name="trotter"; version="0.6"; sha256="0i8r2f2klkkfnjm7jhvga3gx6m7r97pd73d88004jzlm9ficspgy"; depends=[]; };
+  trtf = derive2 { name="trtf"; version="0.3-0"; sha256="1fca08lkwaa9m7ac69i3k3d8dxn8fp231yh68gz3ym8ja9vhzd7w"; depends=[Formula libcoin mlt partykit sandwich variables]; };
   trueskill = derive2 { name="trueskill"; version="0.1"; sha256="0mqvm64fcsxjlh789lqdk6l28q31yhh6jjirwjlgbpxxb90c5107"; depends=[]; };
   truncSP = derive2 { name="truncSP"; version="1.2.2"; sha256="1hdi518j3sg9273g01l1jqlmqya3ppim82ma7zakwqpmsjmzw18q"; depends=[boot truncreg]; };
   truncdist = derive2 { name="truncdist"; version="1.0-2"; sha256="02ihw4ixhadwr3sqm6r264i8vpcaz8pn69vkzabd8fwqvn5vcj5q"; depends=[evd]; };
@@ -11467,7 +11703,7 @@ in with self; {
   trust = derive2 { name="trust"; version="0.1-7"; sha256="013gmiqb6frzsl6fsb5pqfdapwdxas0llg954hlcvgki9al5mlg3"; depends=[]; };
   trustOptim = derive2 { name="trustOptim"; version="0.8.6.1"; sha256="07xkif11s3mdp4fmhl6zks6p2kdy4fdys2wpa8ibqpc6gd50vhvn"; depends=[Matrix Rcpp RcppEigen]; };
   tsBSS = derive2 { name="tsBSS"; version="0.4"; sha256="0mli9y63bp7n21wzz5gga8i0c8f3db6cdcc5jp4zm529svilzkxm"; depends=[forecast ICtest JADE Rcpp RcppArmadillo]; };
-  tsDyn = derive2 { name="tsDyn"; version="0.9-44"; sha256="09vxp2zir0vidzfm57j4cgkigsiyqwvr6ssy15ydfjxha30523a7"; depends=[foreach forecast MASS Matrix mgcv mnormt nnet tseries tseriesChaos urca vars]; };
+  tsDyn = derive2 { name="tsDyn"; version="0.9-46"; sha256="1cq36qxpimiwlzjnnjqj5rjb3l1h684day4kch99vza1v62h1lkv"; depends=[foreach forecast MASS Matrix mgcv mnormt nnet tseries tseriesChaos urca vars]; };
   tsModel = derive2 { name="tsModel"; version="0.6"; sha256="0mkmhzj4g38ngzfcfx0zsiqpxs2qpw82kgmm1b8gl671s4rz00zs"; depends=[]; };
   tsPI = derive2 { name="tsPI"; version="1.0.2"; sha256="0lw4s7gxn4xldsk5f3dz27bb9jywa14195703b5q1497h9j966gk"; depends=[KFAS]; };
   tsSelect = derive2 { name="tsSelect"; version="0.1.8"; sha256="0ysijzhhwaj5n7h50jacshnla6d0h61q0f6lj19ic0lwvlz4yazy"; depends=[forecast]; };
@@ -11477,21 +11713,23 @@ in with self; {
   tsc = derive2 { name="tsc"; version="1.0-3"; sha256="1acsdkxizlkix1sskwqv2a80rshw6f14zvcsjhrmmdfd4bmwh36y"; depends=[]; };
   tscount = derive2 { name="tscount"; version="1.4.1"; sha256="0bnzv06wxc1kzjlysljndsjimjsn3g8v6s1vbics1cwcs5jkjwr4"; depends=[ltsa]; };
   tsdecomp = derive2 { name="tsdecomp"; version="0.2"; sha256="1wy37gjp49dr60s4zhwv19iv3mzr1fjz5yilqmqgy78j5d45ns15"; depends=[]; };
-  tsdf = derive2 { name="tsdf"; version="1.1-2"; sha256="11yapq3ml9clj0sqwibraj3wd7pikh2qrhq4df4m45ib6fiaa3jc"; depends=[gsDesign]; };
+  tsdf = derive2 { name="tsdf"; version="1.1-4"; sha256="0kjcfh7vrnyg2aqzr5kkzdccriy2h5x1byzhdhvyb68fi4fjf4dh"; depends=[gsDesign]; };
   tsdisagg2 = derive2 { name="tsdisagg2"; version="0.1.0"; sha256="1vjypf9d4rdprpgxfsgpccn412kvar59v341ridq2hcdp7hfb70s"; depends=[]; };
   tsensembler = derive2 { name="tsensembler"; version="0.0.2"; sha256="0yhm6vayh1yjrvki04f86xvxmrl9pcj92z0gzwyh0j1cqp48sh79"; depends=[Cubist earth gbm glmnet kernlab nnet pls ranger RcppRoll xts zoo]; };
-  tseries = derive2 { name="tseries"; version="0.10-42"; sha256="1i26ankmbc96w6abqhxhbvhd12m87f2jfb5xrbl01iqmhy2pjzw2"; depends=[quadprog quantmod zoo]; };
+  tseries = derive2 { name="tseries"; version="0.10-43"; sha256="1yjxhj7l1p2przczl6frggfcr5iwda9lbcsmh0y75gbbbps14yf2"; depends=[quadprog quantmod zoo]; };
   tseriesChaos = derive2 { name="tseriesChaos"; version="0.1-13"; sha256="0f2hycxyvcaj3s1lmva1qy46xr6qi43k8fvnm4md5qj8jp2zkazg"; depends=[deSolve]; };
   tseriesEntropy = derive2 { name="tseriesEntropy"; version="0.6-0"; sha256="04clfkpkiy5p5nxcq59c7f4v1llj1d95lvck23h1px50lvb993fv"; depends=[cubature ks]; };
   tsfa = derive2 { name="tsfa"; version="2014.10-1"; sha256="0gkgl55v08dr288nf8r769f96qri7qbi5src7y6azrykb37nz6iz"; depends=[dse EvalEst GPArotation setRNG tfplot tframe]; };
   tsgui = derive2 { name="tsgui"; version="0.0.3"; sha256="16cx68gq2f63wx7mhbv0aq6pr71wfbc035kjbjjsfrbagaq4ib13"; depends=[RandomFieldsUtils tcltk2 tkrplot]; };
   tsiR = derive2 { name="tsiR"; version="0.3.0"; sha256="1brlwsbs4rac8z6cf1q3xm1apdi4ban5hj7p3qvz2yx810gbxp1d"; depends=[ggplot2 kernlab reshape2]; };
+  tsibble = derive2 { name="tsibble"; version="0.1.2"; sha256="17khhah6vpb4ld3yvvbczx9vkdnilazgdifh0ldnbdw5131bsr34"; depends=[dplyr lubridate pillar purrr Rcpp rlang tibble tidyr tidyselect]; };
   tsintermittent = derive2 { name="tsintermittent"; version="1.9"; sha256="1mrb6yrsjwj6j40n97sgg42ddvwhjnaiq9k7ka249bbq01gf2975"; depends=[MAPA]; };
   tsna = derive2 { name="tsna"; version="0.2.0"; sha256="09q01jzj1rnv2f2jf7djnq5xrkp7lvykdbf4bfswsy0f95j0asx2"; depends=[network networkDynamic statnet_common]; };
   tsne = derive2 { name="tsne"; version="0.1-3"; sha256="0s8cv2pndkddq62rzlgzgfdjp1vjv5hz5i5957sllnb97vbzbzb6"; depends=[]; };
   tsoutliers = derive2 { name="tsoutliers"; version="0.6-6"; sha256="0q4lkqasnsps8lzpiyk074nfhv29sbma080729c8l3ba1sa9pmyn"; depends=[forecast KFKSDS stsm]; };
   tspmeta = derive2 { name="tspmeta"; version="1.2"; sha256="028jbbd0pwpbjq4r6jcc1h0p7c4djcb9d2mvgzw1rmpphaxjvrkd"; depends=[BBmisc checkmate fpc ggplot2 MASS splancs stringr TSP vegan]; };
   tsqn = derive2 { name="tsqn"; version="1.0.0"; sha256="1iv1wwa6a9824dbgfk5a609szppc3a8j250z74hb8csjvwwx9qq9"; depends=[fracdiff MASS robustbase]; };
+  tstools = derive2 { name="tstools"; version="0.3.5.1"; sha256="11n56jd4hap8bl8dicdy1zvf916jc66nkg9v2i31n6n42v5dw699"; depends=[data_table jsonlite xts zoo]; };
   tswge = derive2 { name="tswge"; version="1.0.0"; sha256="0wj0kyb1dcwfn8wjp7skgcflc48cr4va0i0jg8x970658if7z6fz"; depends=[astsa MASS PolynomF signal waveslim]; };
   tsxtreme = derive2 { name="tsxtreme"; version="0.3.1"; sha256="0cfska93ws5x11pslcdhf5rrshxzh6ddlgmfkl9zlci2rqdbwz35"; depends=[evd MASS mvtnorm]; };
   ttScreening = derive2 { name="ttScreening"; version="1.5"; sha256="0qn8lkvgvqpmm368fwpqkm09yaj9mw42mjlikyiwpv2wrgbpmg9n"; depends=[corpcor limma MASS matrixStats sva]; };
@@ -11500,10 +11738,10 @@ in with self; {
   tttplot = derive2 { name="tttplot"; version="1.1.1"; sha256="0rmgp1888y07w0h8kwq1azpr6bysjq4pyjf6ygpra75jj4563wx9"; depends=[]; };
   ttutils = derive2 { name="ttutils"; version="1.0-1"; sha256="18mk30070mcplybg320vjbk9v5flxnbqi5gx0yyr1z6ymjmnrxbc"; depends=[]; };
   ttwa = derive2 { name="ttwa"; version="0.8.5.1"; sha256="1lhypcwssq0dspizvln3w4dg16ad6mz8cj4w34c5vsrayqid7fyn"; depends=[data_table]; };
-  tuber = derive2 { name="tuber"; version="0.9.2"; sha256="1a26p0iqdpklda7w94nfisv75kniq3k10n8pfhfxd8jc7y09xcv6"; depends=[httr plyr]; };
+  tuber = derive2 { name="tuber"; version="0.9.4"; sha256="0fa4mpvm4mlscnhfbgrj6zxfjf26scv08nihnfi0k3f67jiwdlg5"; depends=[httr plyr]; };
   tubern = derive2 { name="tubern"; version="0.1.0"; sha256="0wpn4aig6r1kpncrgrqra4kr0f07rdq7z4p2k0h28f7kww6l52vv"; depends=[httr jsonlite]; };
   tuckerR_mmgg = derive2 { name="tuckerR.mmgg"; version="1.5.0"; sha256="0pxsnvzh5gy5dsdsqsmq8hkr597dnnv60b5dw7bqw493lavk2ccm"; depends=[]; };
-  tufte = derive2 { name="tufte"; version="0.2"; sha256="0yh5xdxapqpf5hgdn8c2jkk63817l2w6bxavw8457r89rnj1022p"; depends=[htmltools knitr rmarkdown]; };
+  tufte = derive2 { name="tufte"; version="0.3"; sha256="1fpv9ilf8ajynz38ny0abfnq20xzpgwbxaxj8ijwy8viki893bd0"; depends=[htmltools knitr rmarkdown xfun]; };
   tufterhandout = derive2 { name="tufterhandout"; version="1.2.1"; sha256="04fvvbx69a28nk7i4wz5ynamz1yvsa2ibz542r1xaq1ikk0ywqbw"; depends=[knitr rmarkdown]; };
   tukeytrend = derive2 { name="tukeytrend"; version="0.4"; sha256="14jyv8xb7ghbprn9gm5dlkry868i14ga63pfi78dhmq67i43s70x"; depends=[lme4 Matrix mgcv multcomp nlme pbkrtest]; };
   tumblR = derive2 { name="tumblR"; version="1.1"; sha256="0gl6q6rff9bp21gvi3bz8kmwbhimxqrv1mmzwshl1ys9r7d4dvps"; depends=[httr RCurl RJSONIO stringr]; };
@@ -11514,12 +11752,12 @@ in with self; {
   turfR = derive2 { name="turfR"; version="0.8-7"; sha256="007jmkppfv1x4zzvvd65fhg5k15ybjhsya2zfjgwm77wm34y81ca"; depends=[dplyr]; };
   turner = derive2 { name="turner"; version="0.1.7"; sha256="1xckb750hbfmzhvabj0lzrsscib7g187b44ag831z58zvawwh772"; depends=[tester]; };
   tutorial = derive2 { name="tutorial"; version="0.4.3"; sha256="0sxdlpw0w4azlaxdlk36ycrric6pbj2zi4nyv26pgsp0cr1hrx6r"; depends=[base64enc knitr markdown rjson]; };
-  tvR = derive2 { name="tvR"; version="0.1.0"; sha256="1r1mr7zbvv81rld43b1q8c7yaylqilny3fwsyykvcm1qjgg0myr2"; depends=[imager Matrix Rcpp RcppArmadillo]; };
+  tvR = derive2 { name="tvR"; version="0.1.1"; sha256="1amcaala3lqzj4cv51hdqd7xydvx4fjs7hprc0n0b1b6xv7md1v3"; depends=[imager Matrix Rcpp RcppArmadillo Rdpack]; };
   tvReg = derive2 { name="tvReg"; version="0.2.1"; sha256="10ad9475i6q1phrjc2hh1h9si14qv9z27yn0n31cnm9fqnprdqn8"; depends=[bvarsv MASS Matrix systemfit vars]; };
   tvd = derive2 { name="tvd"; version="0.1.0"; sha256="07al7gpm81a16q5nppsyc5rhv6zzkcvw72isx955b1q189v073aw"; depends=[Rcpp]; };
   tvm = derive2 { name="tvm"; version="0.3.0"; sha256="1iv0qrks1zdiq8jaqr1h46snq8wc3g3q017hxc8zc6fqnsz1whf6"; depends=[ggplot2 reshape2]; };
   twang = derive2 { name="twang"; version="1.5"; sha256="1sp1vb6l0mwpy9b9my5d3spc0q0zs7xg4dkmi4cl7hy7m9xy1dbk"; depends=[gbm lattice latticeExtra survey xtable]; };
-  tweedie = derive2 { name="tweedie"; version="2.3.1"; sha256="0jp2cm37xcclfy9b5h9qrz2g1636n1yb5flg89h6m6x2vamgx25a"; depends=[]; };
+  tweedie = derive2 { name="tweedie"; version="2.3.2"; sha256="10fv998qjxsyx0h94fi0xbh6xbf24nwgh254n9zfnmix9vk2cqls"; depends=[]; };
   tweenr = derive2 { name="tweenr"; version="0.1.5"; sha256="06h0vhxlljmvxg4a62sqrq53lpbvl5w19dqcpyw1jqvrb5agidnq"; depends=[Rcpp]; };
   tweet2r = derive2 { name="tweet2r"; version="1.0"; sha256="0v7xshk389k3aws72ww9kqc2ycw6l6q9xmhps47g3bdl64jy8bay"; depends=[ggmap ggplot2 maptools plyr rgdal ROAuth RPostgreSQL RSQLite sp spacetime spatstat splancs streamR]; };
   twfy = derive2 { name="twfy"; version="0.1.0"; sha256="14xxl9y8iagnn5jd06k6jyy4wk7crm64svz8h0zmzcvg47k8bwc7"; depends=[httr jsonlite]; };
@@ -11533,20 +11771,20 @@ in with self; {
   uGMAR = derive2 { name="uGMAR"; version="1.0.2"; sha256="09k3g0rnaf7gkczgak8biajnql5fjv32dv59y0ncd8zvv0d9i77q"; depends=[Brobdingnag]; };
   uHMM = derive2 { name="uHMM"; version="1.0"; sha256="1516ipadxi7rc1dbinr5rva2fbcr5i2zg3rlli5wy7r6naf8fzzl"; depends=[chron class cluster clValid corrplot FactoMineR HMM tcltk2 tkrplot]; };
   uaparserjs = derive2 { name="uaparserjs"; version="0.1.0"; sha256="1zhz39jrvi64sj0wvwkm4y8gakfp6kz1knw4wn08kk4fa9ymyjvq"; depends=[dplyr purrr V8]; };
-  uavRmp = derive2 { name="uavRmp"; version="0.5.1"; sha256="16a1azgva231rkq45xrgs6afa0yaxd0grcqs95phdji6fppkgc3l"; depends=[data_table devtools gdalUtils geosphere htmltools htmlwidgets log4r maptools raster rgdal rgeos roxygen2 sf sp spatial_tools stringr zoo]; };
+  uavRmp = derive2 { name="uavRmp"; version="0.5.3"; sha256="05annx1vzpssxf5ycrgk2dizgl83zbwvl2x3bj8r5d8w5lvlpwrb"; depends=[brew data_table devtools gdalUtils geosphere htmltools htmlwidgets log4r maptools raster rgdal rgeos roxygen2 sf sp spatial_tools stringr zoo]; };
   ubeR = derive2 { name="ubeR"; version="0.1.4"; sha256="1ilclna04hd1ykcp2b3gcj0v4qznwx0d24yavxnf2yh5d91wr6z2"; depends=[dplyr ggmap ggplot2 ggthemes googleway httpuv httr jsonlite]; };
   ucbthesis = derive2 { name="ucbthesis"; version="1.0"; sha256="0l855if3a7862lxlnkbx52qa617mby634sbb2gkprj21rwd7lcbp"; depends=[knitr stringr]; };
   ucminf = derive2 { name="ucminf"; version="1.1-4"; sha256="01vggwg1w71k98qs6fhb0x1843vi322mf4g3hbclks94kcpkisx2"; depends=[]; };
   udapi = derive2 { name="udapi"; version="0.1.0"; sha256="0hwnrx9qkazja288m6irmwwybiys9npk6sk60acjdczsfrn1hvl0"; depends=[curl httr]; };
-  udpipe = derive2 { name="udpipe"; version="0.2"; sha256="0qa8451x6918ihwz2bqqygq9dznm3ax1wgg655xg2pcg62kja91i"; depends=[data_table Matrix Rcpp]; };
+  udpipe = derive2 { name="udpipe"; version="0.4"; sha256="00n4779g7idc29m7j32plqc4cnhrhhh28zmhd3lp74sxzfhi2vkb"; depends=[data_table Matrix Rcpp]; };
   udunits2 = derive2 { name="udunits2"; version="0.13"; sha256="0yav7rm2afcx67xqrknybxgz7x63w78zyxa0xifvc0k2gz0d6mfi"; depends=[]; };
-  uiucthemes = derive2 { name="uiucthemes"; version="0.1.1"; sha256="0d1agg94z0qy6k4pbv01p1xb0zh42gkjl5i9kbqblplnk2swkzyi"; depends=[rmarkdown]; };
+  uiucthemes = derive2 { name="uiucthemes"; version="0.2.0"; sha256="1z1wx89b2d7z1a2zc4ai05v9slfpidja8f561jcsrcdi9hz2yp81"; depends=[rmarkdown]; };
   ukbabynames = derive2 { name="ukbabynames"; version="0.1.1"; sha256="0vrwcf3hixd40ag6kb289anq2ys2k6vdhhsrjbizvndkyn8sr0r0"; depends=[]; };
-  ukbtools = derive2 { name="ukbtools"; version="0.10.0"; sha256="1vlkciq3jip00ycnjqmdkbhi1wawjn7nnb10apkp5lga6xqvldca"; depends=[dplyr ggplot2 magrittr plyr purrr readr scales tibble tidyr XML]; };
+  ukbtools = derive2 { name="ukbtools"; version="0.10.1"; sha256="1q1pp15lmia1cadiyqpbk532yy8r8hfskglybpkrxrjq2i1sdm4j"; depends=[dplyr ggplot2 magrittr plyr purrr readr scales stringr tibble tidyr XML]; };
   ukds = derive2 { name="ukds"; version="0.1.0"; sha256="00lgr9jy57bwa8p38mqcf4fk29g2w2wqk3pwf9av6f5lapzzgc94"; depends=[magrittr rio RSelenium stringr]; };
   ukgasapi = derive2 { name="ukgasapi"; version="0.13"; sha256="0bnblha96ldbxj0nqhcj26d1dk2xm6nkjqqval1jlc2pki20mr9n"; depends=[RCurl XML]; };
   ump = derive2 { name="ump"; version="0.5-8"; sha256="1sg226caq9y41cwl7wr5s9z3bpq2j5p6rj6fy2pasbzimgzw0byx"; depends=[]; };
-  umx = derive2 { name="umx"; version="1.9.1"; sha256="0s1mma8y5h48lc1sg1iv0r667sf992nfcl88kv7ijmi5aqxgi2mm"; depends=[DiagrammeR knitr MASS Matrix mvtnorm nlme numDeriv OpenMx polycor R2HTML RCurl sfsmisc xtable]; };
+  umx = derive2 { name="umx"; version="2.0.2"; sha256="1665h1yjs28zfpy7ziy0qnv8chm5nb5fcca1jj0cfbsspzndm24p"; depends=[cowplot DiagrammeR ggplot2 knitr MASS Matrix mvtnorm nlme numDeriv OpenMx polycor R2HTML RCurl sfsmisc xtable]; };
   unbalanced = derive2 { name="unbalanced"; version="2.0"; sha256="18hy9nnq42s1viij0a5i9wzrrfmmbf7y3yzjzymz2wnrx4f2pqwv"; depends=[doParallel FNN foreach mlr RANN]; };
   unbalhaar = derive2 { name="unbalhaar"; version="2.0"; sha256="0v6bkin1cakwl9lmv49s0jnccl9d6vdslbi1a7kfvmr5dgy760hs"; depends=[]; };
   uncmbb = derive2 { name="uncmbb"; version="0.1.0"; sha256="0gkd475k4qbnfn3cgh8w4fq4g3i2fn3dlb8n89ih3xdk5ac4ns73"; depends=[]; };
@@ -11558,18 +11796,17 @@ in with self; {
   unifDAG = derive2 { name="unifDAG"; version="1.0.1"; sha256="1zf2pclddswrssil7ikq75449ks3070jxkzy2lmggq9gyipdypps"; depends=[gmp graph]; };
   uniftest = derive2 { name="uniftest"; version="1.1"; sha256="0a37m7l3lc6rznx10w9h9krnn5paim2i2wvw47ckwag7bv0d4pm4"; depends=[orthopolynom]; };
   uniqtag = derive2 { name="uniqtag"; version="1.0"; sha256="025q71mzdv3n1jw1fa37bbw8116msnfzcia01p1864si04ch5358"; depends=[]; };
-  uniqueAtomMat = derive2 { name="uniqueAtomMat"; version="0.1-3-2"; sha256="1msk9wzxhqdq6737b5xay1nqyvppb2yjcpnff2l7c7jf4xrlw0pp"; depends=[]; };
-  unitedR = derive2 { name="unitedR"; version="0.2"; sha256="0glcyji0cypb2687cvyra0zzlzbq0md7qb60abgi0199hf51q3dj"; depends=[plyr]; };
+  unitedR = derive2 { name="unitedR"; version="0.3.1"; sha256="06plbhjbn1gflpxarn21knhiwfr02vxprak9qcghl30fkkymd02r"; depends=[plyr]; };
   unitizer = derive2 { name="unitizer"; version="1.4.5"; sha256="1ml1x9jvwmh8mg2w2j2g8ffibw6a1ihj0aih11zzf4gjhs0w5p9d"; depends=[crayon diffobj]; };
-  units = derive2 { name="units"; version="0.4-6"; sha256="1vx11yrmpk61gkhafbhhl97c8r4h9zvz9pd257daa8f2gsdkqf6v"; depends=[udunits2]; };
+  units = derive2 { name="units"; version="0.5-1"; sha256="07hbhgk7vpfb94gyk028rrqy793aa8sgykkqm3k2fgb23nwcd6vl"; depends=[udunits2]; };
   unittest = derive2 { name="unittest"; version="1.3-0"; sha256="0haf3s3pc5bhsm6y5njghr9w8ifsjxczm5r7g0ynylwzvd019n8b"; depends=[]; };
-  univOutl = derive2 { name="univOutl"; version="0.1-3"; sha256="0p6x38szag3ngk48rz3vlsph5y6yd2vckpkqfd9h7yz2ziyyy5m6"; depends=[Hmisc robustbase]; };
+  univOutl = derive2 { name="univOutl"; version="0.1-4"; sha256="041cc1jn95zababc4i84c378i204zkn865k2vd7mk1piwm3qkrj5"; depends=[Hmisc robustbase]; };
   unix = derive2 { name="unix"; version="1.3"; sha256="1l5w22j0h3qzya13wx7y8lx2baw496vcmn39l2y8r1v38as9dybc"; depends=[]; };
   unjoin = derive2 { name="unjoin"; version="0.0.3"; sha256="08vjgl4dnh9kycrvdq5ngf57fy61n0nc582bi4znv06pq696rkwp"; depends=[dplyr rlang tibble]; };
   unmarked = derive2 { name="unmarked"; version="0.12-2"; sha256="1ql8l7kc8py7zand164w3yszqbmwyxvrkjvr10l4hx2mkcnvxzx0"; depends=[lattice plyr raster Rcpp RcppArmadillo reshape]; };
-  unpivotr = derive2 { name="unpivotr"; version="0.2.1"; sha256="0gijbx2ziyfh9wl0a8dxnmm31961sdd9hi0i09frkqhxmcch45fx"; depends=[data_table dplyr dtplyr lazyeval magrittr purrr tibble tidyr xml2]; };
+  unpivotr = derive2 { name="unpivotr"; version="0.3.1"; sha256="184xpnvcc8k0nxqad3q9qsj47g7icw98sm9bnx8fz4ga4zppxn4p"; depends=[data_table dplyr dtplyr magrittr purrr rlang tibble tidyr xml2]; };
   unrepx = derive2 { name="unrepx"; version="1.0"; sha256="1dzvwpza60y9p7kz1f0bm20wid5jyxx9pma4w41az9shq5kkr0aj"; depends=[]; };
-  unrtf = derive2 { name="unrtf"; version="1.1"; sha256="135ry73xdjwqibkj56j3js2pmjpdy8kk5xxs6ncs64yk733kz2jh"; depends=[sys]; };
+  unrtf = derive2 { name="unrtf"; version="1.2"; sha256="11q2p6cnf1pqsh8sys45gb4xf713bh693lm59d8nw09kcbm23210"; depends=[sys]; };
   unsystation = derive2 { name="unsystation"; version="0.1.1"; sha256="0w5llr2kyv7g5fx5yvlyqwj4da5k5fq1f2y70c9pjdzrny9lpz4q"; depends=[doParallel foreach iterators Rcpp RcppArmadillo]; };
   untb = derive2 { name="untb"; version="1.7-2"; sha256="1ha0xj94sz1r325qb4sb5hla9hw1gbqr76703vk792x9696skhji"; depends=[Brobdingnag partitions polynom]; };
   unvotes = derive2 { name="unvotes"; version="0.2.0"; sha256="0wanvivwm1nmqadq2vapg27kasnjnr0a4np2kw54wj9pg21izqic"; depends=[]; };
@@ -11578,21 +11815,22 @@ in with self; {
   upmfit = derive2 { name="upmfit"; version="0.1.0"; sha256="0f0rk606v17abgw3mwlwihl6fsxprp44h2xbhv1675i18i36vbgx"; depends=[mcmcplots R2jags]; };
   uptasticsearch = derive2 { name="uptasticsearch"; version="0.1.0"; sha256="0kr9lmfp5fa3rcmk0s56pgr4h2pabic17m9yv2sljg7cvx50iss6"; depends=[data_table futile_logger httr jsonlite purrr stringr uuid]; };
   uptimeRobot = derive2 { name="uptimeRobot"; version="1.0.0"; sha256="1sbr0vs6jqcyxjbs7q45bsfdnp3bc59phw0h3fwajqq1cxjgzdww"; depends=[plyr RCurl rjson]; };
+  upwaver = derive2 { name="upwaver"; version="1.0.1"; sha256="0pl5r1rh91s8i74zrsrblp6mjn371a2lp01f5d37d1vnjxc3dn9n"; depends=[assertthat httr rjson XLConnect]; };
   uqr = derive2 { name="uqr"; version="1.0.0"; sha256="0f7isjfb5almp1zypxzw3lfkygkcixmg0xdsw0zznf61r6qhbqyr"; depends=[gtools Hmisc]; };
   urca = derive2 { name="urca"; version="1.3-0"; sha256="1akaqwf3fvvvx4sgfn641fd4sj51s0701pvfl6s5hnz2k0iwh732"; depends=[nlme]; };
   urlshorteneR = derive2 { name="urlshorteneR"; version="0.9.2"; sha256="1y5n1rn2c7yj5ncxfnsrj9lvaam2j3vvx8ld1vqyjay1r8flzifd"; depends=[httr jsonlite stringr]; };
-  urltools = derive2 { name="urltools"; version="1.6.0"; sha256="1vyv88x5l0hr4jhn7sics11g8j6817gn4yjpk58b40ynija42kkb"; depends=[Rcpp triebeard]; };
+  urltools = derive2 { name="urltools"; version="1.7.0"; sha256="0kxv54j4rf8jwyfv3z3plyb9vycwi0m1jv7z2nxnm3729p72y9xl"; depends=[Rcpp triebeard]; };
   uroot = derive2 { name="uroot"; version="2.0-9"; sha256="0nxc8d4v9v5z3wbnj325iq2yrh0mipqgg2rn8pp2jyyq9vb1cxlv"; depends=[]; };
   usdm = derive2 { name="usdm"; version="1.1-18"; sha256="1sis47fri2lrbx2ll5ps7bvycjqhncnia800izf11szgayim5lrv"; depends=[raster sp]; };
   usedist = derive2 { name="usedist"; version="0.1.0"; sha256="17mldp0888ig2xc8cp1nhldj5g3srwmbx3mfcnzz21n1fz31jkmg"; depends=[]; };
   useful = derive2 { name="useful"; version="1.2.3"; sha256="016fwnjrnq44m71jmiy8cpzncja77pii2ag2ir85jdk4fzgckn7l"; depends=[dplyr ggplot2 magrittr Matrix plyr purrr scales]; };
   userfriendlyscience = derive2 { name="userfriendlyscience"; version="0.7.0"; sha256="14wdy74mj9rzlpmrsy3b4fda5f2sx078w1k1lgahz0yra3bypl3k"; depends=[BiasedUrn car data_tree DiagrammeR digest diptest fBasics GGally ggplot2 ggrepel ggridges GPArotation gridExtra gtable knitr lavaan lme4 MASS MBESS minpack_lm pander plyr psych pwr RColorBrewer rio scales SCRT SuppDists viridis XML xtable]; };
-  usethis = derive2 { name="usethis"; version="1.1.0"; sha256="1amx6qd8mksqr38y6j3aj1xck3kpq0fhc37w3ygyc19pasqfabpj"; depends=[clipr clisymbols crayon desc digest gh git2r rmarkdown rprojroot rstudioapi whisker withr]; };
+  usethis = derive2 { name="usethis"; version="1.2.0"; sha256="0y8nw2kcwnygkwxbdshf9czlf6064fs4h54hvr3j1nbv4a479i68"; depends=[backports clipr clisymbols crayon curl desc gh git2r httr rematch2 rmarkdown rprojroot rstudioapi styler whisker]; };
   uskewFactors = derive2 { name="uskewFactors"; version="2.0"; sha256="0ndi5987ak8sa7krgiglsibfg0k7z9j8fg47hg1m8ar0sq4r1yj6"; depends=[MASS MCMCpack mvtnorm tmvtnorm]; };
   usl = derive2 { name="usl"; version="1.8.0"; sha256="04w7p9i08a51smgg11kh4hablic5rjmr5hndrnlg49j5h20i7w1v"; depends=[nlsr]; };
   usmap = derive2 { name="usmap"; version="0.2.1"; sha256="0ilg8fzrxpljdly8xkniirqa3lw74kfark75pv071aa4l6xkiwlg"; depends=[]; };
   ustyc = derive2 { name="ustyc"; version="1.0.0"; sha256="1267bng2dz3229cbbq47w22i2yq2ydpw26ngqa1nbi3ma6hwqsv4"; depends=[plyr XML]; };
-  utf8 = derive2 { name="utf8"; version="1.1.0"; sha256="0kyw8irdjbhq7l7kd8cgvwszr215i5akm68jxz1h1645ab2f52ka"; depends=[]; };
+  utf8 = derive2 { name="utf8"; version="1.1.3"; sha256="03s4j6059q0nly68vpk6wy3p3f5ypakw93fj35kzd82b4z1r9cs3"; depends=[]; };
   utf8latex = derive2 { name="utf8latex"; version="1.0.4"; sha256="12isrl056h7y7nr7wk52dnvf3frcp66qqy7si869ark2aj81f959"; depends=[]; };
   utility = derive2 { name="utility"; version="1.4.2"; sha256="0q08yc0sxbcjhsr0nkgc2pyxkd93zwlbf0jyq21cf535mj4036gq"; depends=[]; };
   utilsIPEA = derive2 { name="utilsIPEA"; version="0.0.5"; sha256="1kllm94c23pb176nazcfgsv38aawbzdwqdhyxx1c1n1jlsls2zk6"; depends=[data_table dplyr RCurl stringdist stringr]; };
@@ -11603,7 +11841,7 @@ in with self; {
   vaersvax = derive2 { name="vaersvax"; version="1.0.4"; sha256="15znkwbhr624qgwlcrdhaxpdfl85ym845mr2sy8b016d3ngz7n94"; depends=[]; };
   vagalumeR = derive2 { name="vagalumeR"; version="0.1.1"; sha256="1l1p63yhwqvkh8kgqii9n96vdm86jfc64nrinjp5l7jhx99sn013"; depends=[httr jsonlite plyr stringr]; };
   valaddin = derive2 { name="valaddin"; version="0.1.2"; sha256="0j1c3g9gn2j0manz3jjh58cnl7b1rfwm9494xqrfqpia8948p9vq"; depends=[lazyeval purrr]; };
-  validaRA = derive2 { name="validaRA"; version="0.1.1"; sha256="02dm62fiyvy52asmfp0qjjnbr5xhsy8yx37sly1wb5w1bvgqkd1n"; depends=[BH bit64 data_table Rcpp rmarkdown stringr]; };
+  valection = derive2 { name="valection"; version="1.0.0"; sha256="0104zcg3cw57ksgmb321hnyv095mn3frxci9vikj1smwarpnrpzc"; depends=[testthat]; };
   validann = derive2 { name="validann"; version="1.2.1"; sha256="00c0hkjiv8n7mksx6sknb4xkkivxr1ml31k697csv4imwrk09dy5"; depends=[moments]; };
   validate = derive2 { name="validate"; version="0.2.0"; sha256="178paxywwiaa45pqhknpw2k6f08b35nlnhwvqv2d1d289fz4f6qh"; depends=[settings yaml]; };
   validateRS = derive2 { name="validateRS"; version="1.0.0"; sha256="1ivw9ddr6z2wrsqvhbn87p5pikhkxlz8p45pb5nq13dvs359vkww"; depends=[data_table reshape2 triangle truncnorm]; };
@@ -11611,10 +11849,9 @@ in with self; {
   validatetools = derive2 { name="validatetools"; version="0.4.1"; sha256="1ivwgva37j26csvp4w3w7d10yq6myqdg6gcgxrl9z8j3gldnzv7p"; depends=[lpSolveAPI validate]; };
   valorate = derive2 { name="valorate"; version="1.0-1"; sha256="06vczszpkipsxfs7h6ld33vvxb5ci62rwg3cglwy3lcfifhbnsfi"; depends=[survival]; };
   valottery = derive2 { name="valottery"; version="0.0.1"; sha256="0rlv8agm9ng4jcb9ixqifh7kjczvkx7047brq8yf9kg7rb8mzgpz"; depends=[]; };
-  valr = derive2 { name="valr"; version="0.3.1"; sha256="1f98qr204fv5dngm6qricx4mnrfds8nlpnszxidk4bnvhc23xq93"; depends=[BH broom dplyr ggplot2 Rcpp readr rlang stringr tibble]; };
-  valuer = derive2 { name="valuer"; version="1.1.1"; sha256="1pvzhx5irxww6vb8j4nsanlzgwaa4z96vw4l97h6l27h1403gdkb"; depends=[ggplot2 orthopolynom R6 Rcpp RcppEigen timeDate yuima]; };
+  valr = derive2 { name="valr"; version="0.4.0"; sha256="1km828lif5nh15fxc3kbk3xp14gmsd6f3n0g5ml9zbdimh9n990z"; depends=[BH bindrcpp broom dplyr ggplot2 plogr Rcpp readr rlang stringr tibble]; };
+  valuer = derive2 { name="valuer"; version="1.1.2"; sha256="0mbwzsvy34ppngyxdzpd9w1r4f00cik4maqab9kpiflrrv9xdp78"; depends=[ggplot2 orthopolynom R6 Rcpp RcppEigen timeDate yuima]; };
   vanddraabe = derive2 { name="vanddraabe"; version="1.0.0"; sha256="0hnfkwrrk50a5rica3lk2d52qi77xya3aspf13g0zygbyvv7ls72"; depends=[bio3d cowplot fastcluster ggplot2 openxlsx reshape2 scales]; };
-  varComp = derive2 { name="varComp"; version="0.2-0"; sha256="05a8f4r16ryy81has6k68p6bybg8khbqlbfm5b12ba8fdfy9lj87"; depends=[CompQuadForm MASS Matrix mvtnorm nlme quadprog RLRsim SPA3G]; };
   varSel = derive2 { name="varSel"; version="0.1"; sha256="0ddj3swfxzchs75kfi6h25h3c33hpapnd5kcwcijnqhlh902b1r0"; depends=[]; };
   varSelRF = derive2 { name="varSelRF"; version="0.7-8"; sha256="0h49rl1j13yfh97rsfsyh9s2c4wajny4rzms2qw77d0cavxqg53i"; depends=[randomForest]; };
   varband = derive2 { name="varband"; version="0.9.0"; sha256="16z66rx7xq5zan8pnw100c9r5syw1ml4hgzi9mch52aia23v21p9"; depends=[Rcpp RcppArmadillo]; };
@@ -11628,27 +11865,27 @@ in with self; {
   vars = derive2 { name="vars"; version="1.5-2"; sha256="1q45z5b07ww4nafrvjl48z0w1zpck3cd8fssgwgh4pw84id3dyjh"; depends=[lmtest MASS sandwich strucchange urca]; };
   vbdm = derive2 { name="vbdm"; version="0.0.4"; sha256="1rbff0whhbfcf6q5wpr3ws1n4n2kcr79yifcni12vxg69a3v6dd3"; depends=[]; };
   vbsr = derive2 { name="vbsr"; version="0.0.5"; sha256="1avskbxxyinjjdga4rnghcfvd4sypv4m39ysfaij5avvmi89bx3b"; depends=[]; };
-  vcd = derive2 { name="vcd"; version="1.4-3"; sha256="05azric2w8mrsdk7y0484cjygcgcmbp96q2v500wvn91fj98kkhp"; depends=[colorspace lmtest MASS]; };
+  vcd = derive2 { name="vcd"; version="1.4-4"; sha256="1lp99h0wvsc61l1dgcqjxdrcgpgw88ak430cdsv43kmm43qssqd5"; depends=[colorspace lmtest MASS]; };
   vcdExtra = derive2 { name="vcdExtra"; version="0.7-1"; sha256="163x9hhvhgdmrqbcig7b120lk63svy0y652scbrcb11f85zrgb0c"; depends=[ca gnm MASS vcd]; };
-  vcfR = derive2 { name="vcfR"; version="1.5.0"; sha256="08hsfk69j2xafmf98izhnimxcda12fsqdvy94xhwy811sx9d7mvw"; depends=[ape dplyr magrittr memuse pinfsc50 Rcpp stringr tidyr vegan viridisLite]; };
+  vcfR = derive2 { name="vcfR"; version="1.7.0"; sha256="1vx4s5z8h8mk8gqra2a5mkapz5xv1im76klq8qkpvj6ic4wcwsxs"; depends=[ape dplyr magrittr memuse pinfsc50 Rcpp stringr tibble tidyr vegan viridisLite]; };
   vcov = derive2 { name="vcov"; version="0.0.1"; sha256="1w89mr8dk6436bxap28rszajgm9k7sjfqsr1i4p68dlhw8zk4yq1"; depends=[]; };
-  vcrpart = derive2 { name="vcrpart"; version="1.0-1"; sha256="0bmr17f6h3hnis7qvssfcwf1m5x3d7piv98s82l5jp83jfpy6z1v"; depends=[formula_tools nlme numDeriv partykit rpart sandwich strucchange ucminf zoo]; };
+  vcrpart = derive2 { name="vcrpart"; version="1.0-2"; sha256="1xfvsxgyf39d2qxnm40nzkqp7q12y8nbpn9h154n876zxxfs7gh1"; depends=[formula_tools nlme numDeriv partykit rpart sandwich strucchange ucminf zoo]; };
   vdg = derive2 { name="vdg"; version="1.2.0"; sha256="1hi5d14nh9q784sbdk018awrawh9f1aix0wl26x7n0xb4707rcmy"; depends=[ggplot2 gridExtra proxy quantreg]; };
-  vdiffr = derive2 { name="vdiffr"; version="0.2.1"; sha256="0dkycszm61s2nqvxffsljykgwnvklj18kg8rp206v9gc0i3fd2wz"; depends=[devtools fontquiver gdtools glue htmlwidgets purrr R6 Rcpp rlang shiny svglite testthat xml2]; };
+  vdiffr = derive2 { name="vdiffr"; version="0.2.2"; sha256="11annh6dl4xyky4c6jx0jhvwpfmqfha57666qzs225sj30xq84dc"; depends=[devtools fontquiver gdtools glue htmlwidgets purrr R6 Rcpp rlang shiny svglite testthat xml2]; };
   vdmR = derive2 { name="vdmR"; version="0.2.5"; sha256="1v96khvg3k33kg3aavanl8g05n5mjkbqsbf8c4lya73f3rs4sfgb"; depends=[broom dplyr GGally ggplot2 gridSVG maptools plyr Rdpack rgdal rgeos rjson Rook sp]; };
   vec2dtransf = derive2 { name="vec2dtransf"; version="1.1"; sha256="029xynay9f9rn0syphh2rhd3szv50ib4r0h0xfhhvbbb37h5dc9s"; depends=[sp]; };
   veccompare = derive2 { name="veccompare"; version="0.1.0"; sha256="03nyyxvhhwfxxg5w6qflk7q234ipbhj9fd4abcp50sxz3diabch1"; depends=[corrplot gtools pander purrr qgraph reshape2 VennDiagram]; };
-  vecsets = derive2 { name="vecsets"; version="1.1"; sha256="0k27g3frc9y9z2qlm19kfpls6wl0422dilhdlk6096f1fp3mc6ij"; depends=[]; };
+  vecsets = derive2 { name="vecsets"; version="1.2.1"; sha256="086af6swjpbkd140yvb76affy5gn4p9xm41m3akm8axc3qk0hybg"; depends=[]; };
   vegalite = derive2 { name="vegalite"; version="0.6.1"; sha256="0dlzhvrg3nj6knyycdgg3d1vzq3dn9vxb34fjin9hzilszqmarbk"; depends=[base64 clipr digest htmltools htmlwidgets jsonlite magrittr webshot]; };
-  vegan = derive2 { name="vegan"; version="2.4-4"; sha256="1n57dzv2aid6iqd9fkqik401sidqanhzsawyak94qbiyh6dbd1x9"; depends=[cluster lattice MASS mgcv permute]; };
-  vegan3d = derive2 { name="vegan3d"; version="1.1-0"; sha256="1rhqk9sj71mrb53r2pgdy87bdq3drx5j4a9ilwvw23dlvjry889l"; depends=[cluster rgl scatterplot3d vegan]; };
+  vegan = derive2 { name="vegan"; version="2.4-6"; sha256="175mqr42mmxy98gpf3rky8alnkw3w1k90ggdw3cispl36841p76w"; depends=[cluster lattice MASS mgcv permute]; };
+  vegan3d = derive2 { name="vegan3d"; version="1.1-1"; sha256="1jd9m2immkhgb1zr39gsgl746y7qpi5fhj8awmqq5lyr5j6jp6jh"; depends=[cluster rgl scatterplot3d vegan]; };
   vegclust = derive2 { name="vegclust"; version="1.7.1"; sha256="1k1dcw424s19f8ngsksvdmsayahl1hkxd9v2irf8ljpp688l8idi"; depends=[Rcpp sp vegan]; };
   vegdata = derive2 { name="vegdata"; version="0.9.1"; sha256="0w4dk7qcl89w04qgnlna5lk5hxnyrvwmgjjxmnvb6r5dspq7qyad"; depends=[foreign httr jsonlite XML]; };
   vegetarian = derive2 { name="vegetarian"; version="1.2"; sha256="15ys1m8p3067dfsjwz6ds837n6rqd19my23yj8vw78xli3qmn445"; depends=[]; };
-  vegtable = derive2 { name="vegtable"; version="0.1.0"; sha256="12nfw0263vw9x74siqdfmlyf7dxi0kyjrla5wiwn9gfq9xbz1hrj"; depends=[foreign plotKML qdapRegex sp taxlist vegdata]; };
-  vein = derive2 { name="vein"; version="0.2.2-25"; sha256="048l32b47rqb1rjz5cay3izla4j5r8qpgyilym1m9dn7n6iay8ha"; depends=[raster rgdal rgeos sp units]; };
+  vegtable = derive2 { name="vegtable"; version="0.1.1"; sha256="0vpkfagkvwkij4kn4zxxiddbnw1qxv6dajjlis4byl766606xi1v"; depends=[foreign plotKML qdapRegex sp taxlist vegdata]; };
+  vein = derive2 { name="vein"; version="0.2.3"; sha256="0sidixipn8kc2i3n9qlgk76rqvxriz1z1ms2pmicv0qnj1a5pwgp"; depends=[raster rgdal rgeos sp units]; };
   velociraptr = derive2 { name="velociraptr"; version="1.0"; sha256="1n7q08i37qbbh5cjq6jb4gmpzzip3wx2wx8xx5wpkln8n3nyiqki"; depends=[RCurl rgdal]; };
-  velox = derive2 { name="velox"; version="0.1.0"; sha256="0jiza6myx4fj26agzbqjllr34f5kpmgcidrrv1r8jasljsbqf0n1"; depends=[raster Rcpp rgdal rgeos sp]; };
+  velox = derive2 { name="velox"; version="0.2.0"; sha256="1jrarfsfflvpc0dqh5gnw92fk8zic222n7pr7hd0lhr5d389k6d0"; depends=[BH raster Rcpp rgdal rgeos sf sp]; };
   vembedr = derive2 { name="vembedr"; version="0.1.3"; sha256="0zg6j0g9l7j36ifwabhxrin5z0dics66bqkc7x6rqijmizk1xpba"; depends=[htmltools httr magrittr stringr]; };
   venn = derive2 { name="venn"; version="1.5"; sha256="0mb8864kmn98184q007jnn7cydh02sx8bh1mhsskycmi70c8w8ai"; depends=[]; };
   vennLasso = derive2 { name="vennLasso"; version="0.1.1"; sha256="1xlf60xjvk0xq96mgzkj65q21mjk2k274xkcwsfmgir9xfdq60rd"; depends=[foreach igraph MASS Matrix Rcpp RcppEigen RcppNumerical survival VennDiagram visNetwork]; };
@@ -11668,16 +11905,17 @@ in with self; {
   vioplot = derive2 { name="vioplot"; version="0.2"; sha256="16wkb26kv6qr34hv5zgqmgq6zzgysg9i78pvy2c097lr60v087v0"; depends=[sm]; };
   viopoints = derive2 { name="viopoints"; version="0.2-1"; sha256="0cpbkkzm1rxch8gnvlmmzy8g521f5ang3nhlcnin419gha0w6avf"; depends=[]; };
   vipor = derive2 { name="vipor"; version="0.4.5"; sha256="112gc0d7f8iavgf56pnzfxb7hy75yhd0zlyjzshdcfbnqcd2a6bx"; depends=[]; };
-  viridis = derive2 { name="viridis"; version="0.4.0"; sha256="03mha2935k1mw7mjjkq7mrx185hl0m3vq3967iiwbknpivbdxllk"; depends=[ggplot2 gridExtra viridisLite]; };
-  viridisLite = derive2 { name="viridisLite"; version="0.2.0"; sha256="1546h44ng4dxs130jkh6lkh990hmp90m1w45sq5p47n546gr0k9d"; depends=[]; };
+  viridis = derive2 { name="viridis"; version="0.5.0"; sha256="1ka6amybgzqkg3cbwfxwwqzzzpfn6q5jcia5am0bw48y5hbpg97y"; depends=[ggplot2 gridExtra viridisLite]; };
+  viridisLite = derive2 { name="viridisLite"; version="0.3.0"; sha256="1by2l05f0yabwvv64lhnv7bbhx0w683s3wr9j2xda920ghpa23kq"; depends=[]; };
   virtualspecies = derive2 { name="virtualspecies"; version="1.4-2"; sha256="19qw8vqf08x6fgm8w159qabpgr2wv2cxishpj6888ihcaa9ykp8f"; depends=[ade4 dismo raster rworldmap]; };
   virustotal = derive2 { name="virustotal"; version="0.2.1"; sha256="0lky75al8zcvmfgx7a2s3bij8ya4avdsnv046lk7564zfd8rbymw"; depends=[httr plyr]; };
-  visNetwork = derive2 { name="visNetwork"; version="2.0.1"; sha256="1dvnr7zw1azggmdvr281q2kyy6b7gj36vcjp2xc1zblwiz2r35sq"; depends=[htmltools htmlwidgets jsonlite magrittr]; };
+  visNetwork = derive2 { name="visNetwork"; version="2.0.3"; sha256="0bs6war8m6vnzyhmzfmry5sfc5v1crq8i8r8nn70shf19k7pabmw"; depends=[htmltools htmlwidgets jsonlite magrittr]; };
   visdat = derive2 { name="visdat"; version="0.1.0"; sha256="1r009jlg3wwg06j5066c09567q24986c74f0cd68kcbmihaxngbx"; depends=[dplyr ggplot2 magrittr purrr tidyr]; };
   visreg = derive2 { name="visreg"; version="2.4-1"; sha256="1lkp668ni5p7k0vzcr75p1bsc1pyg0j0sghagdjb11abinmfzsm1"; depends=[lattice]; };
   vistime = derive2 { name="vistime"; version="0.4.0"; sha256="0fahih28q7lyywnm4mri9macdx4c5b3c5djmg557f7dxlyhhjw0l"; depends=[plotly RColorBrewer]; };
   visualFields = derive2 { name="visualFields"; version="0.4.3"; sha256="0ws3cz71hhhrf4xkdb644li04d31wf51xb2sq789bl2lf50q6a1a"; depends=[flip gridBase Hmisc matrixStats]; };
   visualize = derive2 { name="visualize"; version="4.3.0"; sha256="1s49sx828f25d4n93mn28xdbc81zflk2sr3h8ffs2mkjr888qd8y"; depends=[]; };
+  visvow = derive2 { name="visvow"; version="0.1.0"; sha256="0nb849m6dqfanqlaqcargw0rlf4ch9v09zmf0zqmxkwcil0w0dka"; depends=[Cairo DT ggplot2 plot3D plyr pracma psych Rdpack readxl shiny shinyBS svglite WriteXLS]; };
   vita = derive2 { name="vita"; version="1.0.0"; sha256="114p2lzcr8rn68f0z4kmjdnragqlmi18axda9ma4sbqh8mrmjs9v"; depends=[randomForest Rcpp]; };
   vitality = derive2 { name="vitality"; version="1.2"; sha256="0vjbf39i7qm3857gyidg2j5hfimpydav1sx2d07n12b8q1cs8k4p"; depends=[]; };
   vkR = derive2 { name="vkR"; version="0.1"; sha256="0rb66am3y009wli8ykl58i02kzm6cdqz5v5d4vvzlbngz8crdkyy"; depends=[httr jsonlite XML]; };
@@ -11686,19 +11924,19 @@ in with self; {
   vocaldia = derive2 { name="vocaldia"; version="0.8.2"; sha256="15314sq2gbi1z47ppvy8y3ljjk12jq4k5a1dfyi56h2lpzrc76ny"; depends=[]; };
   vortexR = derive2 { name="vortexR"; version="1.1.4"; sha256="1zjrywjh8nrzaqmrl2yym481j0y40126xz8lh52vc8pk041p3xdb"; depends=[betareg data_table GGally ggplot2 glmulti gtools irr plyr R_utils stringr vortexRdata]; };
   vortexRdata = derive2 { name="vortexRdata"; version="1.0.3"; sha256="1pq910xaqk6d5amg8hj7xagb5wn2ahfrmqairf3vhwqx55lhjbg1"; depends=[]; };
-  vote = derive2 { name="vote"; version="1.0-0"; sha256="1fx5x5248s48n86gdclv8pjnllly89rw0l6d2is263qqndn9fsk9"; depends=[formattable knitr]; };
+  vote = derive2 { name="vote"; version="1.1-0"; sha256="1kxbv4062g4x9vn4gh74c6zwdshysw5n7vx9qljhq2wrdnqzjpyg"; depends=[formattable knitr]; };
   voteogram = derive2 { name="voteogram"; version="0.2.0"; sha256="0m4j7iz7mc6z536vk0kmqfd8ank87ingv5vnjl7mn62r53c5fbsf"; depends=[dplyr ggplot2 jsonlite scales]; };
   vottrans = derive2 { name="vottrans"; version="1.0"; sha256="1fp7jrw072ws39bqsg88bm2qndcv68aa2vdqwgnza58p1dfq3x9f"; depends=[quadprog]; };
   vowels = derive2 { name="vowels"; version="1.2-1"; sha256="0177xysb5y8jzpxn9wdygq2f74gys67g29cd12zw77vlq3c3kkbr"; depends=[]; };
   vows = derive2 { name="vows"; version="0.5"; sha256="06akjdbab9v7r47di7syvcm7gf4k81djizg8maszs5l1ksyhmv6b"; depends=[fda gamm4 mgcv oro_nifti RLRsim shape stringr]; };
   voxel = derive2 { name="voxel"; version="1.3.2"; sha256="0sixcan3v5nczmrrxn56rw5dqjq8xx7z3cp18j23jq26mvq4nm34"; depends=[gamm4 ggplot2 lmerTest mgcv oro_nifti]; };
-  vpc = derive2 { name="vpc"; version="1.0.0"; sha256="1d8k7d016qzd6njqraacdzb91j6drm5985aj6bxhcyz499pg3gbi"; depends=[classInt dplyr ggplot2 MASS readr reshape2 survival]; };
-  vqtl = derive2 { name="vqtl"; version="1.2.0"; sha256="1l5b1bchl08z3bx5y6dbvbw4hnxzb6i5i6h7vv5kd8mbffkdspyb"; depends=[dglm doParallel dplyr evd foreach ggplot2 gtools iterators knitr lazyeval qtl stringr testthat tidyr]; };
+  vpc = derive2 { name="vpc"; version="1.0.1"; sha256="0zxiakls7wi0278f6v74xdcaw500am8gfs8lp7cciaxnw2clvsbv"; depends=[classInt dplyr ggplot2 MASS readr reshape2 survival]; };
+  vqtl = derive2 { name="vqtl"; version="2.0.0"; sha256="193jd5wcz8s3n2571jn5f6vz7kgf6l8a6w9anzd53pgc2644w3f9"; depends=[dglm doParallel dplyr evd foreach ggplot2 gtools hglm iterators knitr lazyeval purrr qtl stringr testthat tidyr]; };
   vrcp = derive2 { name="vrcp"; version="0.1.1"; sha256="1wrch1dqy752gkj24h1dgi2x3kf1797xj4pf1s9mszf3x3ic905d"; depends=[ggplot2]; };
   vrmlgen = derive2 { name="vrmlgen"; version="1.4.9"; sha256="0lifhhf41yml4k83wpkssl14jgn8jaw1lcknwbci1sd8s1c4478l"; depends=[]; };
   vrtest = derive2 { name="vrtest"; version="0.97"; sha256="00hdgb0r18nwv3qay97b09kqqw9xqsbya06rrjyddqh9r6ggx1y0"; depends=[]; };
   vscc = derive2 { name="vscc"; version="0.2"; sha256="1p14v8vd8kckd44g4dvzh51gdkd8jvsc4bkd2i4csx8vjiwrni5w"; depends=[mclust teigen]; };
-  vtreat = derive2 { name="vtreat"; version="1.0.1"; sha256="1pqx8c1cd0rxdcchyzgjk3kjjvq4y6x0pysxs2gg192ap4svxlw2"; depends=[]; };
+  vtreat = derive2 { name="vtreat"; version="1.0.2"; sha256="17w1iy0bypdyaci6yjfbqhdwvnbacn9kpb1i28k3664c96qm8gs7"; depends=[]; };
   vudc = derive2 { name="vudc"; version="1.1"; sha256="0zxz6n3ixa3xjzcinky8ymqjx9w8y8z65mz8d84dl00mxzkmkz4h"; depends=[]; };
   vwr = derive2 { name="vwr"; version="0.3.0"; sha256="1h790vjcdfngs1siwldvqz8jrxpkajl3266lzadfnmchfan1x7xv"; depends=[lattice latticeExtra stringdist]; };
   wBoot = derive2 { name="wBoot"; version="1.0.3"; sha256="08qgkkv6jvqmxq5gvfp7jbrc3k8mxajfww7k8a3p8888aq411p7q"; depends=[boot simpleboot]; };
@@ -11706,53 +11944,55 @@ in with self; {
   wNNSel = derive2 { name="wNNSel"; version="0.1"; sha256="19j2yz6lvkxpmjr0vv6pjc7j1c02y0hb3gay5sy1y0xk706aggb5"; depends=[]; };
   wPerm = derive2 { name="wPerm"; version="1.0.1"; sha256="0f3v0kba87wkwyii0pzvs6a8ja897aifpvwkvryl2hzxxxaml7z4"; depends=[]; };
   wSVM = derive2 { name="wSVM"; version="0.1-7"; sha256="0c7rblzgagwfb8mmddkc0nd0f9rv6kapw8znpwapv3fv0j2qzq7h"; depends=[MASS quadprog]; };
-  wTO = derive2 { name="wTO"; version="1.4.1"; sha256="0i1b82s05gh8vvh6dng37rgh35cq05v0hb3ip36svw5fyd9xpd4w"; depends=[data_table igraph magrittr plyr reshape2 som visNetwork]; };
+  wTO = derive2 { name="wTO"; version="1.4.2"; sha256="05mbf6dpl9p1b583kl9gfjqh8xlzdkyagdalhkh6jahcmg9f1fcy"; depends=[data_table igraph magrittr plyr reshape2 som visNetwork]; };
   waccR = derive2 { name="waccR"; version="0.1.0"; sha256="092p1bibyqx1gcrch68l9ilzilg5aqf46b6iagm562292cfi074l"; depends=[dplyr lubridate magrittr rvest tibble xml2]; };
   waffect = derive2 { name="waffect"; version="1.2"; sha256="0r5dvm0ggyxyv81hxdr1an658wkqkhqq2xaqzqpnh4sh4wbak35a"; depends=[Rcpp]; };
   waffle = derive2 { name="waffle"; version="0.7.0"; sha256="1qjmai33p96cyavi9lgi6k30h6fj7db5sr569v9jf4kwx92c61df"; depends=[extrafont ggplot2 gridExtra gtable RColorBrewer]; };
   wahc = derive2 { name="wahc"; version="1.0"; sha256="1324xhajgmxq6dxzpnkcvxdpm2m3g47drhyb2b3h227cn3aakxyg"; depends=[]; };
   wakefield = derive2 { name="wakefield"; version="0.3.0"; sha256="1f74503ar4hw48j13npgzybvwc631xndldidqnyfk72wb11fzi4z"; depends=[chron dplyr ggplot2 stringi]; };
-  walker = derive2 { name="walker"; version="0.2.0"; sha256="0mr4ihai82w217kmg60b910jk9pjmzysws8b2j91w5528yv618kv"; depends=[bayesplot BH dplyr ggplot2 KFAS Rcpp RcppArmadillo RcppEigen rstan StanHeaders]; };
+  walker = derive2 { name="walker"; version="0.2.1"; sha256="1q99nny7mdh7wc3yj4dz0s2454aqyxjcsp5hpjrha14h4p3fcirf"; depends=[bayesplot BH dplyr ggplot2 KFAS Rcpp RcppArmadillo RcppEigen rstan StanHeaders]; };
   walkr = derive2 { name="walkr"; version="0.3.4"; sha256="01278hfa9mppwqmr54826gb65pswhqbh7ai8ij6m4ncc0fk6pvvd"; depends=[ggplot2 hitandrun limSolve MASS Rcpp RcppEigen shinystan]; };
   walkscoreAPI = derive2 { name="walkscoreAPI"; version="1.2"; sha256="1c2gfkl5yl3mkviah8s8zjnqk6lnzma1yilxgfxckdh5wywi39fx"; depends=[]; };
-  wallace = derive2 { name="wallace"; version="1.0"; sha256="0bdc41l83l7607vx25frr6snhd8pqp9cq0qqpzcxf6nvx5grjni2"; depends=[dismo dplyr DT ENMeval leaflet leaflet_extras magrittr maptools raster RColorBrewer rgdal rgeos shiny shinyjs shinythemes spocc spThin]; };
+  wallace = derive2 { name="wallace"; version="1.0.4"; sha256="1adc070z94gwpfv4b1r0m2ylw9nzigzf412zlllbzlmn3pz42076"; depends=[dismo dplyr DT ENMeval leaflet leaflet_extras magrittr maptools raster RColorBrewer rgdal rgeos shiny shinyjs shinythemes spocc spThin]; };
   wally = derive2 { name="wally"; version="1.0.9"; sha256="1g6dywny8s8fpdnfvrlbzsp9d9dhxdxrm1j4dd3b9r6rpiajf964"; depends=[data_table prodlim riskRegression]; };
+  walmartAPI = derive2 { name="walmartAPI"; version="0.1.5"; sha256="1nng8izncj2nmmpywn1ggpzvjh8q7y3q6260qhy9kbmvrrl26spf"; depends=[dplyr glue httr magrittr purrr stringr tibble]; };
   walrus = derive2 { name="walrus"; version="1.0.1"; sha256="032s2k122z5cqkcjvh9gva4vvmj5prn6z3rs8j5y16d98kgambpy"; depends=[ggplot2 jmvcore R6 WRS2]; };
   wand = derive2 { name="wand"; version="0.2.0"; sha256="1p2r96nyr36jv418xi4j2ldarymb4xmpis6d2iz7mq9755kb4fnh"; depends=[dplyr purrr rappdirs Rcpp stringi tibble tidyr]; };
-  warbleR = derive2 { name="warbleR"; version="1.1.9"; sha256="1ppp654n8kdrgg6swz460vrn8f3x829nlds51xqc2x2bk084v9cf"; depends=[bitops doParallel dtw fftw foreach iterators jpeg maps monitoR pbapply pbmcapply proxy RCurl rjson seewave signal tuneR]; };
+  warbleR = derive2 { name="warbleR"; version="1.1.10"; sha256="0xwzrl08zvq4r280adz50rvr304i391l0g8m90dd5cdwxmfn071x"; depends=[bitops doParallel dtw fftw foreach iterators jpeg maps monitoR NatureSounds pbapply pbmcapply proxy RCurl rjson seewave signal tuneR]; };
   warpMix = derive2 { name="warpMix"; version="0.1.0"; sha256="13zbl4aifhg7j5b3vpwgzgs09hr7yblz0rckmj5qh40s78j8cpfn"; depends=[fda fields lme4 MASS nlme reshape2]; };
+  washdata = derive2 { name="washdata"; version="0.1.2"; sha256="01cnlhymh3qg9c7fda8s6lvm4j2vklmb72dfk17sn4p0kkikf9m8"; depends=[]; };
   wasim = derive2 { name="wasim"; version="1.1.2"; sha256="1zydzw7cihhdwv0474fnc4lgaq5fwrv8jinz79vkbidbgcy7i2fd"; depends=[fast MASS qualV tiger]; };
   water = derive2 { name="water"; version="0.7"; sha256="1rdwmld4xxaxx003cjj67jylgg507r2jjqvncbp539q7c2z5b201"; depends=[raster rgdal sp]; };
   waterData = derive2 { name="waterData"; version="1.0.8"; sha256="0884agh876wf3qlbc75fbaa47x2iwvncz7r2l25qw34n8lxq1yr6"; depends=[dataRetrieval lattice latticeExtra lubridate xml2]; };
   waterfall = derive2 { name="waterfall"; version="1.0.2"; sha256="0jy6l9mx0dixwnkychdl18sf4xh73pm0qd1jyxp9rlnv1vcragjp"; depends=[lattice]; };
-  waterfalls = derive2 { name="waterfalls"; version="0.1.1"; sha256="0x3f6phlrismivbaf37vqnz30wvz8xzj33qwl2wyg6lijxbmg551"; depends=[ggplot2]; };
+  waterfalls = derive2 { name="waterfalls"; version="0.1.2"; sha256="01gby1mlhrwcalizpywxcakkx2zifswb0188nrl6z9dkkd1866lm"; depends=[ggplot2]; };
   waveband = derive2 { name="waveband"; version="4.6"; sha256="1y2qi2zb8l2ap6f8ihnpq2yavic464bl5mp5yv1dscbk0nmfn966"; depends=[wavethresh]; };
   waved = derive2 { name="waved"; version="1.1-2"; sha256="17pr9qhz0dbbcr78vwm964d9zd7yrfrqvadr1lwf756bsrscmlg3"; depends=[]; };
+  wavefunction = derive2 { name="wavefunction"; version="1.0.0"; sha256="1g0g9i0s93lcpcx7icqn15bvkmd79slkgimspvvwp2bxdsc5nnf2"; depends=[]; };
   wavelets = derive2 { name="wavelets"; version="0.3-0"; sha256="141s7z7wxl5plxp7xp7wczswlcvb18a4h3n881l9qc4ny9p7gfpa"; depends=[]; };
   wavemulcor = derive2 { name="wavemulcor"; version="2.1.0"; sha256="0z2vyb3rsxxh7k9fgaxi0xa6rwrw3pka1h4xkfrb9xydsacwbvx2"; depends=[waveslim]; };
-  waver = derive2 { name="waver"; version="0.2.0"; sha256="0zxhnrxc68i5jvkc0k2gk11wf0hj92slhb40qiddryx3i7m2yrli"; depends=[geosphere rgdal rgeos sp]; };
+  waver = derive2 { name="waver"; version="0.2.1"; sha256="1kl14cd96fwrqvk35sqbgi8bf31gc2ccxxy5d1v46scwyqkb0g5l"; depends=[geosphere rgdal rgeos sp]; };
   waveslim = derive2 { name="waveslim"; version="1.7.5"; sha256="0lqslkihgrd7rbihqhhk57m9vkbnfsznkvk8430cvbcsn7vridii"; depends=[]; };
   wavethresh = derive2 { name="wavethresh"; version="4.6.8"; sha256="1nz74bm7pgck1i9c28svxnic8wkwkm5dhc8bhrxiih5wxb36kcwk"; depends=[MASS]; };
   wbs = derive2 { name="wbs"; version="1.3"; sha256="1fdf3dj23n63nfnzafq88sxqvi15cbrzsvc8wrljw1raq5z012yv"; depends=[]; };
-  wbstats = derive2 { name="wbstats"; version="0.1.1"; sha256="18yws6zgvs773mhml5hn6aqyc2xyas10cg5jvnk4l50wir2qknxq"; depends=[httr jsonlite]; };
-  wbsts = derive2 { name="wbsts"; version="0.3"; sha256="1h749j20q30lrn3b4ffcap3mvxjpih1gchvv8yag0gbzcs0wc1fm"; depends=[mvtnorm wmtsa]; };
+  wbstats = derive2 { name="wbstats"; version="0.2"; sha256="0rfc9c6892jq7y17dwp6vsn62ggnac964xndmxq3mip6k2pk8yi0"; depends=[httr jsonlite tidyr]; };
   wdman = derive2 { name="wdman"; version="0.2.2"; sha256="1a6zav82w0krk0ncm5b79ahy2hc0xakg9i1m2143ih5p6zvcm5m0"; depends=[assertthat binman semver subprocess yaml]; };
-  weatherData = derive2 { name="weatherData"; version="0.5.0"; sha256="1l207m506wj0jk3skpwhwq66ci4v2jjaz7sbw30ywgpicw9mizs9"; depends=[curl plyr]; };
   weathermetrics = derive2 { name="weathermetrics"; version="1.2.2"; sha256="1hjhgsy3v8328hv4czxxz7kp68sxc10sy10f3dv5j8f6pka6qlsp"; depends=[]; };
   weatherr = derive2 { name="weatherr"; version="0.1.2"; sha256="11sb5bmqccqkvlabsw4siy9n6ivsrvxavywvaffgrs3blmnygql9"; depends=[ggmap lubridate RJSONIO XML]; };
   webTRISr = derive2 { name="webTRISr"; version="0.1.0"; sha256="19xal5zg9mg25vzvkz55zm6gkd8b0y3sw3zbbrxn73a1jg8x5v0l"; depends=[dplyr httr jsonlite lubridate magrittr purrr readr stringr]; };
   webchem = derive2 { name="webchem"; version="0.3.0"; sha256="11ryyniqcf6pa5avc5qks0hpksmapk3564bjva86626vml0mixby"; depends=[httr jsonlite RCurl rvest stringr xml2]; };
+  webdriver = derive2 { name="webdriver"; version="1.0.4"; sha256="0k031f26iihk2dxypqvfi60bhpj78yhwvhbmxqv7yrpa8s6j5flm"; depends=[base64enc callr curl debugme httr jsonlite R6 showimage]; };
   webglobe = derive2 { name="webglobe"; version="1.0.2"; sha256="1277d6fkgrgixlhikfwf0r6z8g5b7mah905xi219qsfycxmifgn9"; depends=[geojsonio httpuv jsonlite]; };
   webmockr = derive2 { name="webmockr"; version="0.1.0"; sha256="0jfjn0y62rrwx88vhx4xfgsf36f147b3yzwvpyshxwvxn9khza5i"; depends=[curl jsonlite lazyeval magrittr R6 urltools]; };
   webp = derive2 { name="webp"; version="0.4"; sha256="0jsyjynrsrqpbg93rn48xrjclkvwmz2c2lhcfli5djny122ymh6r"; depends=[]; };
   webreadr = derive2 { name="webreadr"; version="0.4.0"; sha256="0l3l5g4zj5faxqi1kqwx9lq91gbj40z2q3csrsmpal08qnwkxs90"; depends=[Rcpp readr]; };
   websearchr = derive2 { name="websearchr"; version="0.0.2"; sha256="1yf8ch86khg5syppcxs94mxgc3i5623qyhzh174nssw1wzyqb9ba"; depends=[]; };
-  webshot = derive2 { name="webshot"; version="0.4.2"; sha256="1ljp2c7yj21smr8ihzvmcs29z5gjr9wwfqfp33zrqc8xd8599iq9"; depends=[jsonlite magrittr]; };
+  webshot = derive2 { name="webshot"; version="0.5.0"; sha256="07r71zzmggp4jf92x4ws4wg6v1x98vaj01lsar85bnb30n5vx8gh"; depends=[jsonlite magrittr processx withr]; };
   webuse = derive2 { name="webuse"; version="0.1.2"; sha256="0ks3pb9ir778j9x4l0s4ly2xa1jc9syddqm65wkck52q3lrarg3l"; depends=[haven]; };
   webutils = derive2 { name="webutils"; version="0.6"; sha256="1basl7q2m8y9nw5ksi1kdz6an9pybvsmdd4snrm7a37041xymnps"; depends=[curl jsonlite]; };
   webvis = derive2 { name="webvis"; version="0.0.2"; sha256="1cdn9jrpg2sbx4dsj0xf7m0daqr7fqiw3xy1lg0i0qn9cpvi348f"; depends=[]; };
   wec = derive2 { name="wec"; version="0.4-1"; sha256="10lqh43536d44d6082rpp11q1323pmjbmgrgb8v9mrk9c1ysf50w"; depends=[dplyr]; };
-  weco = derive2 { name="weco"; version="1.0"; sha256="1akn85igd6k5cfj9hzn3g8a77qzhlzwyc2p4l6y8wigyncg7wyqi"; depends=[]; };
+  weco = derive2 { name="weco"; version="1.1"; sha256="1xnhbm499vypn8iwm33h1hv0wih1lj3bglm1rlgxaypbwj1acg53"; depends=[]; };
   weightTAPSPACK = derive2 { name="weightTAPSPACK"; version="0.1"; sha256="0kpfw477qka5qrc6sh73had38xbrwrqp1yv0dj2qiihkiyrp67ks"; depends=[HotDeckImputation mice plyr survey]; };
   weightedScores = derive2 { name="weightedScores"; version="0.9.5.1"; sha256="118hzwaarcb8pk2zz83m6zzzndlpbbzb7gz87vc7zggpa998k1gr"; depends=[mvtnorm rootSolve]; };
   weightr = derive2 { name="weightr"; version="1.1.2"; sha256="13wy7ygx7khbmymg2r0rr6mrl4lbapf5bnnq1rq8izl38sjk7csx"; depends=[]; };
@@ -11767,18 +12007,19 @@ in with self; {
   wgaim = derive2 { name="wgaim"; version="1.4-11"; sha256="1jjyp100dcjjczp61xlvhmy48ynniqcys535vzbgswhr7fvijymg"; depends=[lattice qtl]; };
   wgeesel = derive2 { name="wgeesel"; version="1.4"; sha256="0d49j24jmk6n7fzzdvhc9fxi8yb1shghf7fc7jvm3cahhjffxay2"; depends=[bindata geepack MASS PoisNor]; };
   wgsea = derive2 { name="wgsea"; version="1.8"; sha256="1114wik011sm2n12bwm2bhqvdxagbhbscif45k4pgxdkahy2abpi"; depends=[snpStats]; };
+  whereport = derive2 { name="whereport"; version="0.1"; sha256="1gdqzr2hrnpxbwl7cfps4m3xja8wkgwfs50i2nailybympvdnxm4"; depends=[dplyr]; };
   whisker = derive2 { name="whisker"; version="0.3-2"; sha256="0z4cn115gxcl086d6bnqr8afi67b6a7xqg6ivmk3l4ng1x8kcj28"; depends=[]; };
   whoami = derive2 { name="whoami"; version="1.1.2"; sha256="1wkgh8mxm2ci5ylwppbh38sx5fm5rsm06bimdpc07z35bz4825xg"; depends=[httr jsonlite]; };
   whoapi = derive2 { name="whoapi"; version="0.1.2"; sha256="0ib0an08xsxan24q8mb5ai375njmkdc61lh4321rzgr25iqvi682"; depends=[httr]; };
   wicket = derive2 { name="wicket"; version="0.4.0"; sha256="1lizzmj69bswzlk18fv2v4yxxc6dynvmkymdiafznzcyyz4a8xnf"; depends=[BH Rcpp]; };
   widals = derive2 { name="widals"; version="0.5.4"; sha256="1bl59s1r4gkvq4nkf94fk7m0zvhbrszkgmig66lfxhyvk9r84fvb"; depends=[snowfall]; };
   widenet = derive2 { name="widenet"; version="0.1-2"; sha256="1nimm8szbg82vg00f5c7b3f3sk0gplssbl4ggasjnh7dl621vfny"; depends=[glmnet relaxnet]; };
-  widgetframe = derive2 { name="widgetframe"; version="0.3.0"; sha256="1yza8wylfrs3lfrc1hlhjga0j94m7ngq9ikkia1f87wmc3w59sjh"; depends=[htmltools htmlwidgets magrittr purrr]; };
+  widgetframe = derive2 { name="widgetframe"; version="0.3.1"; sha256="0j0d73m72nzfc1wyrgsqr99ldx72adis6pd57mpim55hz0n9l224"; depends=[htmltools htmlwidgets magrittr purrr]; };
   widyr = derive2 { name="widyr"; version="0.1.0"; sha256="0vy34phli9jynjdwss8cpadaaizh9bhc1h0amsblc0il6xanviqm"; depends=[broom dplyr Matrix purrr reshape2 tidyr tidytext]; };
   wikibooks = derive2 { name="wikibooks"; version="0.2"; sha256="178lhri1b8if2j7y7l9kqgyvmkn4z0bxp5l4dmm97x3pav98c7ks"; depends=[]; };
   wikilake = derive2 { name="wikilake"; version="0.3"; sha256="1y4vinm8gxyj6x36nb4xzhx1yf96x1nwlzzhvj4g36rbcix7dn6q"; depends=[maps rvest selectr sp stringi stringr WikipediR xml2]; };
   wikipediatrend = derive2 { name="wikipediatrend"; version="1.1.14"; sha256="00i38py9n4l0iqkn3257a3jbiwh3hrmx1p9x6rfh9sgfcch8yyj5"; depends=[hellno httr jsonlite RColorBrewer rvest stringr xml2]; };
-  wikitaxa = derive2 { name="wikitaxa"; version="0.1.4"; sha256="0d6ycn8j40lcc4plv7z34h14icaljywbl7b91gd803wxln4nhr6f"; depends=[crul curl data_table jsonlite tibble WikidataR xml2]; };
+  wikitaxa = derive2 { name="wikitaxa"; version="0.2.0"; sha256="06ccb1ix5lsz3jgr3aq2ywq9bdnz020sa5dzlq1ayw95gdqj6icl"; depends=[crul curl data_table jsonlite tibble WikidataR xml2]; };
   wildcard = derive2 { name="wildcard"; version="1.1.0"; sha256="0qkzab84z95g5f4fv3v4wisccgd7k9m3210pz4nvm1x8rfaqfjf1"; depends=[magrittr stringi]; };
   wildlifeDI = derive2 { name="wildlifeDI"; version="0.2"; sha256="0z8zyrl3d73x2j32l6xqz5nwhygzy7c9sjfp6bql5acyfvn7ngjv"; depends=[adehabitatLT rgeos sp]; };
   wildpoker = derive2 { name="wildpoker"; version="1.1"; sha256="1302ain55spz34irmq49sp9b1pvrn2nxmzmqs8m9wdk6g82h3s27"; depends=[]; };
@@ -11787,65 +12028,68 @@ in with self; {
   wingui = derive2 { name="wingui"; version="0.2"; sha256="0yf6k33qpcjzyb7ckwsxpdw3pcsja2wsf08vaca7qw27yxrbmaa3"; depends=[Rcpp]; };
   wiod = derive2 { name="wiod"; version="0.3.0"; sha256="1f151xmc6bm5d28w5123nm0hv7j1v8hay4jk5fk8pwn6yljl1pah"; depends=[decompr gvc]; };
   wiqid = derive2 { name="wiqid"; version="0.1.3"; sha256="06six8w77lf9rc49hnr42xgn2jvhb84wvqgi08ns22yn4z2iz9pz"; depends=[coda HDInterval MASS truncnorm]; };
-  withr = derive2 { name="withr"; version="2.1.0"; sha256="12v263fj6l3ds9nrsj6q7h6zhbivp3w2jk7w9dpk1610d3nx9gf8"; depends=[lattice]; };
+  withr = derive2 { name="withr"; version="2.1.1"; sha256="17pbllxv18gf1mli9mm5px4wzp364907a4wrl20r1y5q8qwawpxx"; depends=[]; };
   wkb = derive2 { name="wkb"; version="0.3-0"; sha256="0s7libkg27jdmcw5qmk5j0cmz3nqq7ny4q8gy4vhbgsgj4gbbdn9"; depends=[sp]; };
   wktmo = derive2 { name="wktmo"; version="1.0.5"; sha256="05pjyk0xsdazbi1x7xfmg097ybybd60zmzzm7sch1ikp05hzn0wb"; depends=[]; };
   wle = derive2 { name="wle"; version="0.9-91"; sha256="18gqwrrw618f1xx93n0lk95gpi3lxvfkr6fmlb82v2wiibb7k7ak"; depends=[circular]; };
   wmlf = derive2 { name="wmlf"; version="0.1.2"; sha256="0zxw84l5v12r15hpyd1kbajjz3cbkn5g884kmj72y7yi0yi1b6d6"; depends=[waveslim]; };
-  wmtsa = derive2 { name="wmtsa"; version="2.0-2"; sha256="14znrylyazsj3d8nxgh3nvr94ifckan6gwy12b43zsyskzqp9zbg"; depends=[ifultools MASS splus2R]; };
-  wnl = derive2 { name="wnl"; version="0.3.1"; sha256="1sk99w3qqswzvkh0nx8na2rc5v7c9rj4iigs606sywjqffisss9y"; depends=[numDeriv]; };
-  wnominate = derive2 { name="wnominate"; version="1.2"; sha256="0kkdlhliihv45hc0fd25kairxd9r71hcx04ri9l0iy8cyhjs2n12"; depends=[pscl]; };
+  wmtsa = derive2 { name="wmtsa"; version="2.0-3"; sha256="1q436krz5p1f4a7a7sya6a9rh9x9mi8zzcgq66gbk9w9w4hcqcj6"; depends=[ifultools MASS splus2R]; };
+  wnl = derive2 { name="wnl"; version="0.3.2"; sha256="1gqp2rrfn4971f12fbf90habk2zqb0hw92nf5c6vvvyx1zad7m81"; depends=[numDeriv]; };
+  wnominate = derive2 { name="wnominate"; version="1.2.5"; sha256="0pvw36jzx90z7ah4f7cyf95csdn5x7n9rh3ddsppa61y1dmjsn5k"; depends=[pscl]; };
   woe = derive2 { name="woe"; version="0.2"; sha256="15mvcmwnrqxpzn054lq85vyzq5rgxkiwbd40gnn4s3ny1xdrwgsm"; depends=[]; };
-  woeBinning = derive2 { name="woeBinning"; version="0.1.4"; sha256="0fjflnhyya93xns2mcklq8vw5zwwivw1ahz4smdmlcpxf35f9cz9"; depends=[]; };
-  woeR = derive2 { name="woeR"; version="0.1.1"; sha256="1wnfcdvrakgbkvas3kb9rwhffj6gfmhi4wa5wamg43a7gribdnp0"; depends=[dplyr]; };
+  woeBinning = derive2 { name="woeBinning"; version="0.1.5"; sha256="04pw32vng31v1n4r1g1fisvv8cacxmcx7m65vw4a2byamp2d25yq"; depends=[]; };
+  woeR = derive2 { name="woeR"; version="0.1.3"; sha256="15bdhgjq39svzaqzmfykyaq4r543lq15jf0sz8m9bwjv2c6vlx5l"; depends=[dplyr]; };
   womblR = derive2 { name="womblR"; version="1.0.2"; sha256="0cnggwi47pmyjqz78vcvdzv3kpss6v4h404w2d7dii0zfqjr7bpk"; depends=[msm mvtnorm Rcpp RcppArmadillo]; };
   wooldridge = derive2 { name="wooldridge"; version="1.2.0"; sha256="1ib7qqmzybk7a171ny0zszh1lw2zgqyz35rb7g6y4ign2ng9ml9k"; depends=[]; };
-  word_alignment = derive2 { name="word.alignment"; version="1.0.7"; sha256="0mpkqq4q8f4v3hwmb0yrwr4gq8ij59nhr8vqwqm4i5cxvqlsi7cr"; depends=[data_table openxlsx quanteda]; };
-  wordbankr = derive2 { name="wordbankr"; version="0.2.0"; sha256="041d5v3gm7bihx85k7kxwlqgg6vs24wzs2h59zf3l3cs39mhrhs5"; depends=[assertthat dplyr magrittr RMySQL stringr tidyr]; };
+  word_alignment = derive2 { name="word.alignment"; version="1.0.8"; sha256="0f8fxz7qhj618bz16mmwm3fhrd9p0idsx6pj0cdx72dkvfgkdwn0"; depends=[data_table openxlsx quanteda]; };
   wordcloud = derive2 { name="wordcloud"; version="2.5"; sha256="1ajqdkm8h1wid3d41zd8v7xzf2swid998w31zrghd45a5lcp7qcm"; depends=[RColorBrewer Rcpp slam]; };
-  wordcloud2 = derive2 { name="wordcloud2"; version="0.2.0"; sha256="0ylsmijrym61s1vhvf8csimznd1yg497xa3yign4bgi5jx4k64ny"; depends=[base64enc htmlwidgets]; };
+  wordcloud2 = derive2 { name="wordcloud2"; version="0.2.1"; sha256="1a2q42bn65q4idxq0vxysyam16q6c18inxv4dqhfy0x52j8z9x6k"; depends=[base64enc htmlwidgets]; };
   wordmatch = derive2 { name="wordmatch"; version="1.0"; sha256="0zscp361qf79y1zsliga18hc7wj36cnydshrqb9pv67b65njrznz"; depends=[plyr reshape2]; };
   wordnet = derive2 { name="wordnet"; version="0.1-14"; sha256="12a21zlc7h973gi1632gngbk8b09vhp3sldh1mh9b5n6h18ga25p"; depends=[rJava]; };
   wordspace = derive2 { name="wordspace"; version="0.2-0"; sha256="0rrnbimf68ax1qxsyn7g0kd76abijzxg5i11h93l0fnzi2g2a9xn"; depends=[cluster iotools MASS Matrix Rcpp sparsesvd]; };
-  worldmet = derive2 { name="worldmet"; version="0.7.5"; sha256="08mj3m0r9rnljlsk3x25cp4da3bdv9qc1jgy1wrd1zg5908j6dis"; depends=[dplyr leaflet openair plyr RCurl readr zoo]; };
+  worldmet = derive2 { name="worldmet"; version="0.8.3"; sha256="0pz4kh11y93gad4jhpyzqz66sma1ngvavmpy4ki4z1dcry452yvs"; depends=[doParallel dplyr foreach leaflet openair readr zoo]; };
   worms = derive2 { name="worms"; version="0.2.1"; sha256="0qxij56wvhlz9pgc1wp5nr3yi2r0h0r7xvlhhvsflch60gprpi1s"; depends=[httr plyr]; };
   worrms = derive2 { name="worrms"; version="0.2.0"; sha256="1mqv2j9235pqdwqnw11b0zdv763wf9wqjqpf3p6fxpmki24j7xk6"; depends=[crul data_table jsonlite tibble]; };
+  wosr = derive2 { name="wosr"; version="0.1.0"; sha256="0j3srk8siiip192w6wdc2w9azbhpdxyrzgyinwmi1z58xqmi9c38"; depends=[httr jsonlite pbapply xml2]; };
   wpp2008 = derive2 { name="wpp2008"; version="1.0-1"; sha256="0gd3vjw1fpzhp3qlf1jpc24f76i0pxsjs5pb1v3k2si6df7q4msd"; depends=[]; };
   wpp2010 = derive2 { name="wpp2010"; version="1.2-0"; sha256="1h87r1cn4lnx80dprvawsyzfkriscqjgr27gvv7n19wvsx8qd57k"; depends=[]; };
   wpp2012 = derive2 { name="wpp2012"; version="2.2-1"; sha256="00283s4r36zzwn67fydrl7ldg6jhn14qkf47h0ifmsky95bd1n5k"; depends=[]; };
   wpp2015 = derive2 { name="wpp2015"; version="1.1-0"; sha256="01vsdma2fgh0vd96ly4f704hl200v0w8ksz60gjxhm44ih3qszh3"; depends=[]; };
-  wpp2017 = derive2 { name="wpp2017"; version="1.1-1"; sha256="18g0jvhskqrx6aafhzcyzjhmm6rwpj6ig5vq11rxax423hdn6aq5"; depends=[]; };
+  wpp2017 = derive2 { name="wpp2017"; version="1.1-2"; sha256="18hyygk928kp25n5iy5nwz2fdicgpk3ncpkp2pksnp0cxzw3585w"; depends=[]; };
   wppExplorer = derive2 { name="wppExplorer"; version="2.1-1"; sha256="0n0ayn8bxkrabw2iyqv3hfkdchbk9bzv1lhkjpxnjb6z3zl1sggl"; depends=[DT ggplot2 googleVis Hmisc plyr reshape2 shiny shinyjs shinythemes wpp2017]; };
   wql = derive2 { name="wql"; version="0.4.9"; sha256="0m16l807mhcjkbqhlzhc24pw4hl78fjyykiszlg337x3qs803fg2"; depends=[ggplot2 reshape2 zoo]; };
   wqs = derive2 { name="wqs"; version="0.0.1"; sha256="14qaa9g9v4nqrv897laflib3wwhflyfaf9wpllmbi5xfv9223rcg"; depends=[glm2 Rsolnp]; };
   wrangle = derive2 { name="wrangle"; version="0.4"; sha256="0d1xdcvgcv8bn20s90sn1dmzhcdz39yr1m2bkcjbvavm132p96bl"; depends=[dplyr lazyeval magrittr tidyr]; };
-  wrapr = derive2 { name="wrapr"; version="1.0.1"; sha256="1n16rqgm0hc7qr8amrdy9q30pzk6s54b3wjl27vk0xaaxaq0042c"; depends=[]; };
-  wrassp = derive2 { name="wrassp"; version="0.1.4"; sha256="0w1hzxwk00lk1hkdxxz6vqa6xzw5sf60y54xzfr510yd02x3r1gn"; depends=[]; };
+  wrapr = derive2 { name="wrapr"; version="1.1.1"; sha256="01v41qcsdpdisvccagba3l67834r6k0lhlalwna7lrvwx008cd9s"; depends=[]; };
+  wrassp = derive2 { name="wrassp"; version="0.1.6"; sha256="1f6yyw6mmwc267cd9v17k6n4fhymi0y201bm6ii56rcw86n4ix77"; depends=[]; };
   write_snns = derive2 { name="write.snns"; version="0.0-4.2"; sha256="0sxg7z8rnh4lssbivkrfxldv4ivy37wkndzzndpbvq2gbvbjnp4l"; depends=[]; };
   writexl = derive2 { name="writexl"; version="0.2"; sha256="0hclrbn21sc0ifd2c5xfww84jf47412wzs86a73swxxjzcbrkg5k"; depends=[]; };
   wrspathrow = derive2 { name="wrspathrow"; version="0.1"; sha256="1xkh12aal85qhk8d0pdj2qbi6pp4jnr6zbxkhdw2zwav57ly3f4i"; depends=[raster rgdal rgeos sp wrspathrowData]; };
   wrspathrowData = derive2 { name="wrspathrowData"; version="1.0"; sha256="0a1aggcll0fmkwfg4h7rs4j5h3v1bh95dkbriwrb0bx0cikg63x3"; depends=[]; };
-  wrswoR = derive2 { name="wrswoR"; version="1.0-1"; sha256="1czw3g2j6as024wwvxiizvvxjmsxmxhz86jbw2lh95nh61znb7l8"; depends=[logging Rcpp]; };
+  wrswoR = derive2 { name="wrswoR"; version="1.1"; sha256="0jnb818xz841bx2i03k3hhy4hxcwpxblskg9nrc8kgbc22rxx4lz"; depends=[logging Rcpp]; };
   wrswoR_benchmark = derive2 { name="wrswoR.benchmark"; version="0.2"; sha256="0vzs2lqq48kzk63xz2k9b7qcy0ph5yyvih6z98jfz36kpdfhdps9"; depends=[curl lazyeval]; };
   wru = derive2 { name="wru"; version="0.1-7"; sha256="1fvbl5i07f6kdwjhirjla4kc1rrmrm8blvn8aa79s87ljagg0ql9"; depends=[devtools]; };
   wskm = derive2 { name="wskm"; version="1.4.28"; sha256="0d9hcriakg6fxzc8wjsahc4zkyjza31mb9dv2h4xcf8298xa96i4"; depends=[clv lattice latticeExtra]; };
   wsrf = derive2 { name="wsrf"; version="1.7.17"; sha256="0gmlvfcy2iqa5sqhwps3hx0hl9fir8nf5xq62f25sn8i3llw752z"; depends=[Rcpp]; };
   wtest = derive2 { name="wtest"; version="2.0"; sha256="16fprxy8lxvipzynxbbs2ras8wflc4g4p1x1439ym1xkg2vwys9a"; depends=[]; };
+  wtss = derive2 { name="wtss"; version="1.0.0"; sha256="041686mnhqcljxm3ska35mslpq30ah47anvnmrgnkx5y05pwa8pj"; depends=[jsonlite lubridate RCurl roxygen2 zoo]; };
+  wunderscraper = derive2 { name="wunderscraper"; version="0.1.0"; sha256="1h9nhxvs673n2ivw466qm77k20541cwgmmq35iv3dcb3hvw36p0r"; depends=[httr jsonlite sf tigris]; };
   wux = derive2 { name="wux"; version="2.2-1"; sha256="0iw0kf0wfspnpc83v7gxhcakmp0z34cccnm0jn9c2za9ay9l2swv"; depends=[abind class corpcor fields gdata Hmisc ncdf4 reshape rgdal rgeos rworldmap sp stringr]; };
   wvtool = derive2 { name="wvtool"; version="1.0"; sha256="0x9awj6g5lzqp2lhwgh9ib7jmfdzyhwazrjvw1vwacqqfhbz8qxv"; depends=[]; };
   x_ent = derive2 { name="x.ent"; version="1.1.7"; sha256="15qra77dqhj27g3qx92gram4mq4n9fdidygdpvxfmcx7ww3vc6yh"; depends=[ggplot2 jsonlite statmod stringr xtable]; };
-  x12 = derive2 { name="x12"; version="1.8.0"; sha256="1pw1dp9prdik6ffh89p3dfq4iciwyfha7sxpyildi726dr8gmkhm"; depends=[stringr x13binary]; };
+  x12 = derive2 { name="x12"; version="1.9.0"; sha256="0hrcw1d52yp5rr4r120lcnfxw2rgs95njg37m28blcnfbq2flfc2"; depends=[stringr x13binary]; };
   x12GUI = derive2 { name="x12GUI"; version="0.13.0"; sha256="1mga7g9gwb3nv2qs27lz4n9rp6j3svads28hql88sxaif6is3nk1"; depends=[cairoDevice Hmisc lattice RGtk2 stringr x12]; };
   x13binary = derive2 { name="x13binary"; version="1.1.39-1"; sha256="1v6slh5136av3l7bk99a57gj6i6khx2j55qv4pyz1zmrzzgaayyc"; depends=[]; };
   xLLiM = derive2 { name="xLLiM"; version="2.1"; sha256="1q6ryw9z5wi0amv5f4drz14p36zy8gc2a0s59q10jixhhyas7ycl"; depends=[abind capushe corpcor igraph MASS Matrix]; };
   xSub = derive2 { name="xSub"; version="0.0.1"; sha256="0ccvkdylsia8qkfjlbbyggpy4l8z3r05cmvp4xb3j4628fa82jav"; depends=[countrycode haven RCurl]; };
   xVA = derive2 { name="xVA"; version="0.8.1"; sha256="0wr4i37sya5gg6v63ka16g9077gxbhvjqyqfaahhban8skzl2adf"; depends=[SACCR Trading]; };
-  xaringan = derive2 { name="xaringan"; version="0.4"; sha256="1yc6wgn3x25csl8sk0xl2v5ddw5hz1h0hqqxqxnz8f7hf5hkg9mg"; depends=[htmltools knitr rmarkdown servr]; };
+  xaringan = derive2 { name="xaringan"; version="0.6"; sha256="0jgdixgbkwp9jnvjnrzdmlawz8f24z8in56cma3hn79glbvxfaw4"; depends=[htmltools knitr rmarkdown servr xfun]; };
   xbreed = derive2 { name="xbreed"; version="1.0.1"; sha256="0grrfra9j0k3mqikmrif5qawh4260ayr40irskzpp9ywsixim63h"; depends=[BGLR]; };
   xergm = derive2 { name="xergm"; version="1.8.2"; sha256="0rg8b0r27nzjnf0zkwfbkw96439h0b40k1l5lqi5igyr0bm7w0cc"; depends=[btergm GERGM rem tnam xergm_common]; };
   xergm_common = derive2 { name="xergm.common"; version="1.7.7"; sha256="0nfls8a1knmnjjrrw0q93qsfrrb9p3yqsm5dxp13z0780vrzxvcj"; depends=[ergm network]; };
-  xesreadR = derive2 { name="xesreadR"; version="0.2.1"; sha256="0q932zkrsg20nchbjf0yynq6c3j6jgslag5n77jc3fdzadk6yf6r"; depends=[bupaR data_table dplyr lubridate purrr stringr tidyr XML xml2]; };
-  xgboost = derive2 { name="xgboost"; version="0.6-4"; sha256="1vfiz44prcjx2y442zc4x1b50k57qwd7sqbz6lq0kiqhp78ivicz"; depends=[data_table magrittr Matrix stringi]; };
+  xesreadR = derive2 { name="xesreadR"; version="0.2.2"; sha256="1y7iilqdj9jv5snzylihs996hvpcj9s3yaiy7wr20m5yh1ngwkvj"; depends=[bupaR data_table dplyr lubridate purrr stringr tidyr XML xml2]; };
+  xfun = derive2 { name="xfun"; version="0.1"; sha256="1sm51gmwgw876d6d1q8smxmfgfh6zsnykfx8qp8z6jmh0fvd89pj"; depends=[]; };
+  xgboost = derive2 { name="xgboost"; version="0.6.4.1"; sha256="0n47xvsrk8f8gy2x33rf93yfpkk4ir4z06f09qhlnrnpq1dvwfzf"; depends=[data_table magrittr Matrix stringi]; };
   xgobi = derive2 { name="xgobi"; version="1.2-15"; sha256="03ym5mm16rb1bdwrymr393r3xgprp0ign45ryym3g0x2zi8dy557"; depends=[]; };
   xhmmScripts = derive2 { name="xhmmScripts"; version="1.1"; sha256="1qryyb34jx9c64l8bnwp40b08y81agdj5w0icj8dk052x50ip1hl"; depends=[gplots plotrix]; };
   xkcd = derive2 { name="xkcd"; version="0.0.5"; sha256="1cq4n7w4adj24qq658z15jkqvrn4pd5abxpcsdkzb2cq98m69iis"; depends=[extrafont ggplot2 Hmisc]; };
@@ -11856,35 +12100,36 @@ in with self; {
   xltabr = derive2 { name="xltabr"; version="0.1.2"; sha256="0pwbpcdiqkhvzxsi6yxly4zza12bw7zc7ji8cvhldw4yl5sxkz1l"; depends=[magrittr openxlsx]; };
   xlutils3 = derive2 { name="xlutils3"; version="0.1.0"; sha256="1cxishi62bd36zlsy5qhzix1p68akdf9kpjg9gfm9aqpcijzccb9"; depends=[magrittr readxl]; };
   xmeta = derive2 { name="xmeta"; version="1.1-4"; sha256="1y9jldi8qn4jpr05g8fnvb23gig180hh36pc2v4y8n8289s9yvg2"; depends=[aod glmmML metafor mvmeta numDeriv]; };
-  xml2 = derive2 { name="xml2"; version="1.1.1"; sha256="05iifrcgzx53w5ciw8bbm4vdwc3giv4xsvazv8chqxkndfvf7wq0"; depends=[BH Rcpp]; };
+  xml2 = derive2 { name="xml2"; version="1.2.0"; sha256="154lmksfiwkhnlmryas25mjhfg6k4mmnnk7bbb29mnn5x5pr2yha"; depends=[Rcpp]; };
   xmlparsedata = derive2 { name="xmlparsedata"; version="1.0.1"; sha256="0q9d4l3p4ypc0qswnjwrd3as9bx9f1niixsc19y1msva51sg5h39"; depends=[]; };
+  xmrr = derive2 { name="xmrr"; version="1.0.1"; sha256="0h5861mym7k7xkby6zilcxq8i3yr06kcaam5pzi2y0q85iycb88f"; depends=[dplyr ggplot2 tidyr]; };
   xoi = derive2 { name="xoi"; version="0.66-9"; sha256="1kd9s9afq5shsaqhrxai9yz60a9imyy5np76fjpkjgyz56kbk6nr"; depends=[qtl]; };
-  xpose = derive2 { name="xpose"; version="0.4.0"; sha256="17h7wiz9h1fy7fgs90s9nd4idpqar2d1mpypagxwy3swwldppvqv"; depends=[dplyr ggforce ggplot2 gridExtra purrr readr rlang stringr tibble tidyr vpc]; };
+  xpose = derive2 { name="xpose"; version="0.4.2"; sha256="11k07z76fpp4fvp3kfx1jc7bx1mwc1xfwyp46xwfhgfbazbvyfd7"; depends=[dplyr ggforce ggplot2 purrr readr rlang stringr tibble tidyr vpc]; };
   xpose4 = derive2 { name="xpose4"; version="4.6.0"; sha256="1pyzpb6ddvpm3nx49brkam6afzhvf7jg8xnijg9jwd2qfijp8lav"; depends=[dplyr gam Hmisc lattice lazyeval readr survival]; };
-  xray = derive2 { name="xray"; version="0.1"; sha256="1awhkj22wcchw8g6wlxmx0pdmgi01vgns6abnbjhk1dxzq5vcb7g"; depends=[dplyr foreach ggplot2 lubridate scales]; };
+  xptr = derive2 { name="xptr"; version="1.1"; sha256="12yvgbwm311hap3kk24wdx5zz084h0lhkj9k10mjzqp4a6aayi88"; depends=[]; };
+  xray = derive2 { name="xray"; version="0.2"; sha256="1ibj92ljlj8a5rmbrci691yhpd4kwrfyl944nzl2dcbf58l01dzq"; depends=[dplyr foreach ggplot2 lubridate scales]; };
   xseq = derive2 { name="xseq"; version="0.2.1"; sha256="0bsakbfvkfv39q2ch2g21b17g84470sq4v73355cljlshsi6404i"; depends=[e1071 gptk impute preprocessCore RColorBrewer sfsmisc]; };
   xslt = derive2 { name="xslt"; version="1.3"; sha256="0giqzmdby9ax8gwx9b7xqka28k3hgymv4289k8p8dvg26d683p3l"; depends=[Rcpp xml2]; };
   xsp = derive2 { name="xsp"; version="0.1.2"; sha256="1jbmxa234v52qji8sz4bkg24c2n65b0zh9py1wyyfzw9n1wx5w0r"; depends=[ggplot2 reshape2]; };
   xtable = derive2 { name="xtable"; version="1.8-2"; sha256="0398qkpvlw3dv0myz4mjcyqwpwc2m31l127r8vdzwc71wb6s28qn"; depends=[]; };
   xtal = derive2 { name="xtal"; version="1.15"; sha256="1zq3vd5x3vw6acn47yd2x7kflr9sm3znmdkm68cs64ha54jbl3vs"; depends=[]; };
-  xtensor = derive2 { name="xtensor"; version="0.3.0-0"; sha256="096bxq92wy3y3q2pqkfhbwrimsp7qhvfj8nmkmfyqy943lydzrzd"; depends=[Rcpp]; };
   xtermStyle = derive2 { name="xtermStyle"; version="3.0.5"; sha256="1q4qq8w4sgxbbb1x0i4k5xndvwisvjszg830wspwb37wigxz8xvz"; depends=[]; };
-  xtractomatic = derive2 { name="xtractomatic"; version="3.3.2"; sha256="10a1apsjqg0cpr267g5336cl6qr3ax03jcl234l9a8b2nh8sbwi5"; depends=[httr ncdf4 sp]; };
-  xts = derive2 { name="xts"; version="0.10-0"; sha256="1w7lxy3hbf005fvpzbwiznj8jbxi07s4189vbgxisd35l9a4v6q4"; depends=[zoo]; };
-  xwf = derive2 { name="xwf"; version="0.1-1"; sha256="0jvcccwyhvrmcg5aimn4y4kglkz7yvz49rivz6nzvfwaa5gvxqgw"; depends=[mgcv]; };
+  xtractomatic = derive2 { name="xtractomatic"; version="3.4.1"; sha256="189lya8ijm8vxjki76gjdhv1nyp3860ydpzg5ij12ggd5qqn1zgy"; depends=[dplyr httr ncdf4 readr sp]; };
+  xts = derive2 { name="xts"; version="0.10-1"; sha256="1j9ddh9v9081zrqlpylsk13fldilhjdyaw6r6pa726fhgnrsf8a2"; depends=[zoo]; };
+  xwf = derive2 { name="xwf"; version="0.2-1"; sha256="1g94wbsq8flnkxxfxx6yg87siiwpyrx219an9a2cf1blnwjv9b68"; depends=[mgcv]; };
   xxIRT = derive2 { name="xxIRT"; version="2.0.3"; sha256="10n9rrhp0v71gmn0s2l2qi6sfplwj7anydw6rxqk409wg5is3x93"; depends=[dplyr ggplot2 lpSolveAPI magrittr reshape2]; };
   xyloplot = derive2 { name="xyloplot"; version="1.5"; sha256="0h90070m3xgcfky5q6vx6l2lfz0ihwbp2xg25mgmbijz4kg3n9d3"; depends=[]; };
   xyz = derive2 { name="xyz"; version="0.2"; sha256="13w4sb4pvgciwr8wsz785dafj2k2kpx7znz46r5d32wx88vkycp4"; depends=[Rcpp]; };
   yCrypticRNAs = derive2 { name="yCrypticRNAs"; version="0.99.2"; sha256="130zp8na3d50b49bcsqzsmjy2sif865h6vfpc5zmp1fhvkyykkfd"; depends=[biomaRt data_table IRanges mclust MESS Rcpp Rsamtools]; };
-  yaImpute = derive2 { name="yaImpute"; version="1.0-26"; sha256="00w127wnwnhkfkrn4764l1ap3d3njlidglk9izcxm0n4kqj0zb49"; depends=[]; };
+  yaImpute = derive2 { name="yaImpute"; version="1.0-29"; sha256="1zxl4l54y9f9lmi17hlhsbsc4f1qb0dnnl5dg9frhq6bhw2lqxqb"; depends=[]; };
   yacca = derive2 { name="yacca"; version="1.1"; sha256="0wg2wgvh1najmccmgzyigj11mshrdb8w4r2pqq360dracpn0ak6x"; depends=[]; };
   yakmoR = derive2 { name="yakmoR"; version="0.1.1"; sha256="09aklz79s0911p2wnpd7gc6vrbr9lmiskhkahsc63pdigggmq9f7"; depends=[BBmisc checkmate Rcpp]; };
-  yaml = derive2 { name="yaml"; version="2.1.14"; sha256="0x88xicrf7vwp77xgan27mnpdljhpkn0pz5kphnwqi3ddy25k9a1"; depends=[]; };
+  yaml = derive2 { name="yaml"; version="2.1.16"; sha256="1xlsmqal607w6c9rx86061y1fwpbyd5lqp9bad5n7cc9a0blpnkm"; depends=[]; };
   yardstick = derive2 { name="yardstick"; version="0.0.1"; sha256="165czwi62nrhhci06fb0rfpk2gki94aiyl4wlflmgpzmspmgz7m8"; depends=[broom dplyr MLmetrics pROC rlang tibble tidyr tidyselect]; };
   yarrr = derive2 { name="yarrr"; version="0.1.5"; sha256="1258bj7x4icaxfabnnd3fgwydnqbzxkih7zw0sdlwdax3q8fw5c5"; depends=[BayesFactor circlize jpeg]; };
   yasp = derive2 { name="yasp"; version="0.1.0"; sha256="082w1l0892v0vrvfmc1ssgy9ccj30hcrg7m56x61spgcmckfshy4"; depends=[]; };
   ycinterextra = derive2 { name="ycinterextra"; version="0.1"; sha256="0hr37izbbmxqkjy6a7q8vcn0vs8an1ck9y8xfjpl5z0rygi8xc1v"; depends=[mcGlobaloptim]; };
-  yearn = derive2 { name="yearn"; version="0.1.1"; sha256="12dnf856sbsksmb83975nfpgkyv0yw8fny2c89pfgg6ivm0sxy6a"; depends=[BiocInstaller devtools githubinstall]; };
+  yearn = derive2 { name="yearn"; version="0.1.3"; sha256="03aqbf3q0nhg73pqpwlqdhpbmfa0rvv78b84b4mqir43601vjx65"; depends=[BiocInstaller devtools githubinstall]; };
   yesno = derive2 { name="yesno"; version="0.0.2"; sha256="0aa8kqcqlix9a9a2l4fnl2qv25dgdn4m7cfsh7m0kk76y8q5gbc9"; depends=[]; };
   yhat = derive2 { name="yhat"; version="2.0-0"; sha256="0vdhkknmms7zy7iha894jn1hr1h5w67pr53r0q67m7p404w21iza"; depends=[boot miscTools plotrix yacca]; };
   yhatr = derive2 { name="yhatr"; version="0.15.1"; sha256="18g2cr1kjxnfw6cwzl62ynppfv1zz732kbx18zq8918l85kx6wbw"; depends=[httr jsonlite stringr]; };
@@ -11896,28 +12141,29 @@ in with self; {
   zCompositions = derive2 { name="zCompositions"; version="1.1.1"; sha256="1j6v7mfxhn67mr3q6cvcjj9pqc8a02w114z8q74h3l6jw8ahjg6m"; depends=[MASS NADA truncnorm]; };
   zFactor = derive2 { name="zFactor"; version="0.1.7"; sha256="0vsjafg65qydfz0j75rrw40si5v2hwbf09z6d58wzffrwzgrwpvd"; depends=[data_table dplyr ggplot2 rootSolve tibble tidyr]; };
   zTree = derive2 { name="zTree"; version="1.0.4"; sha256="058vjvxn1lw07nxw8rs1b8vnw6ccxh3swrmvjicvr35xmakj8qa0"; depends=[plyr]; };
-  zeallot = derive2 { name="zeallot"; version="0.0.6"; sha256="16kvi3j2pf39c0xsx6hhhwjm2ljr45hb357v8nvjvhsx8bk1vf9g"; depends=[]; };
+  zeallot = derive2 { name="zeallot"; version="0.1.0"; sha256="1sd1igcfnv27pa3bqxlbyxchi562h7grnjg1l7wxx3bwr49i57s3"; depends=[]; };
   zebu = derive2 { name="zebu"; version="0.1.2"; sha256="0f9fsb4z8s7k5jnz2ayd52dzri0z46kjbm0gi5rfqjlmk13bhgk4"; depends=[foreach ggplot2 iterators plyr reshape2]; };
   zeligverse = derive2 { name="zeligverse"; version="0.1.1"; sha256="1hf3hbgzdlhhyy2gvg984dwp8d0qm0ziyn8i9h5x00gwf74vn9dr"; depends=[Amelia dplyr MatchIt purrr rstudioapi tibble WhatIf Zelig ZeligChoice ZeligEI]; };
   zendeskR = derive2 { name="zendeskR"; version="0.4"; sha256="06cjwk08w3x6dx717123psinid5bx6c563jnfn890373jw6xnfrk"; depends=[RCurl rjson]; };
-  zenplots = derive2 { name="zenplots"; version="0.0-1"; sha256="0agm81rrn4ip6sljrwm1a9i2q9rwdwamnxm0smz757kypgyll8c2"; depends=[graph MASS PairViz]; };
+  zenplots = derive2 { name="zenplots"; version="0.0-2"; sha256="09dp2d89wnvvqkfz7w1fzs8gyq7ryyxsn2h5mgzbm1spd3dmychw"; depends=[graph loon MASS PairViz]; };
   zetadiv = derive2 { name="zetadiv"; version="1.0.1"; sha256="0a50xj7bgb2w3yx2ghpwq2y2hkilxx0dchhscspzjalyw77jhxvp"; depends=[car glm2 Imap mgcv nnls scam vegan]; };
   zfa = derive2 { name="zfa"; version="1.0"; sha256="0lddwpifkzggzvy56ans5pfknfr8laxcg264f3ph2z150gw1plsh"; depends=[SKAT]; };
   zic = derive2 { name="zic"; version="0.9.1"; sha256="1vd64ljigf6iwgzlgdxgj65nlwir176h7ddznddpaz2abh6n6zwp"; depends=[coda Rcpp RcppArmadillo]; };
   zip = derive2 { name="zip"; version="1.0.0"; sha256="0rgr9pcdhdq3k8n29h2ircp3ri1ibhrx81gja1y7331v15xyrabg"; depends=[]; };
   zipcode = derive2 { name="zipcode"; version="1.0"; sha256="1lvlf1h5fv412idpdssjfh4fki933dm5nhr41ppl1mf45b9j7azn"; depends=[]; };
   zipfR = derive2 { name="zipfR"; version="0.6-10"; sha256="16h5saj0b2qm3qwd7arzamn0n05hn31ybgzq4pb10ri0ajs1cvic"; depends=[]; };
-  ziphsmm = derive2 { name="ziphsmm"; version="1.0.8"; sha256="1d206pg85q9fxc6wiaw0179g5gfcwckqwifx26xfxkv15rbhyp9s"; depends=[Rcpp RcppArmadillo]; };
-  zoeppritz = derive2 { name="zoeppritz"; version="1.0-6"; sha256="0b16w8s26pi5h911jizwqapgwhdh60gcx0khn3kayf9fi40kyzp0"; depends=[]; };
+  ziphsmm = derive2 { name="ziphsmm"; version="2.0.1"; sha256="1q1ack3b6ppyp946f56lhrad1839dzv36qsk58czym46pbpdid4l"; depends=[Rcpp RcppArmadillo]; };
+  zoeppritz = derive2 { name="zoeppritz"; version="1.0-7"; sha256="14j9jl2g7gn94nzs96mwsgwlxnfbr1crjfmfwbi3rk367xi197jb"; depends=[]; };
   zoib = derive2 { name="zoib"; version="1.4.2"; sha256="0gdbcnxlm9m88c2av4zy0k3yvm2cvg24804xnsi0mwfgwmnngdh5"; depends=[abind coda Formula matrixcalc rjags]; };
-  zonator = derive2 { name="zonator"; version="0.5.8"; sha256="1slpyg8h5vb695gf31z66m4isibvckbk7b19vbl8s5svgh7ddl12"; depends=[ggplot2 raster RColorBrewer reshape2 rgdal]; };
-  zoo = derive2 { name="zoo"; version="1.8-0"; sha256="0mqklbx92ifwa0awm7gpm4r9dvwa09p55zjxjnypiqsxy532r4h9"; depends=[lattice]; };
+  zonator = derive2 { name="zonator"; version="0.5.9"; sha256="04gjrm9nxnxsigrc30zghmv37ijsx27134hfnrbm51smw2y60dm4"; depends=[ggplot2 raster RColorBrewer reshape2 rgdal]; };
+  zoo = derive2 { name="zoo"; version="1.8-1"; sha256="16nc5jnpkf5j9vgq3pzssv7knj30mi055wj7q3sygz3l0d88hgfr"; depends=[lattice]; };
   zooaRch = derive2 { name="zooaRch"; version="1.2"; sha256="0grc378xppv0303sf4flfqz5002vq5a23nzbq4bsff41rww7dihc"; depends=[ggplot2]; };
   zooaRchGUI = derive2 { name="zooaRchGUI"; version="1.0.2"; sha256="0snggx0d69ajz6xxwnv03l12jpjrjkpy2dgf4lrpm2l8rspd27i4"; depends=[car coda foreign geomorph ggplot2 MASS pgirmess raster readxl rjags sp spdep splancs tcltk2 tkrplot vegan]; };
   zoocat = derive2 { name="zoocat"; version="0.2.0"; sha256="1xqi90jnpqjdf3zr4pldh1a2gjppjwjrgkq71rvdhmcrf5s8jav0"; depends=[plyr reshape2 scales zoo]; };
   zooimage = derive2 { name="zooimage"; version="3.0-5"; sha256="1r3slmyw0dyqfa40dr5xga814z09ibhmmby8p1cii5lh61xm4c39"; depends=[filehash jpeg mlearning png svDialogs svMisc]; };
   zoom = derive2 { name="zoom"; version="2.0.4"; sha256="03f5rxfr6ncf1j6vpn7pip21q7ylj4bx0a5xphqb6x6i33lxf1g5"; depends=[]; };
-  zoon = derive2 { name="zoon"; version="0.6"; sha256="0dyl8fnzjncxb9q322xsdmvbm0wwzl1w9750vmvndpd8c05qi1n0"; depends=[dismo plyr randomForest raster RCurl rfigshare rgdal roxygen2 SDMTools sp testthat]; };
+  zoon = derive2 { name="zoon"; version="0.6.3"; sha256="11accyiv9n2zk7fq5bapbmv1ixadab19666i8w41bw642lafgivq"; depends=[dismo plyr randomForest raster RCurl rfigshare rgdal roxygen2 rworldmap SDMTools sp testthat]; };
+  zscorer = derive2 { name="zscorer"; version="0.1.0"; sha256="1199d72v9hm7k5jnll2ngn3jlfsiaxrrpbqzrkl0fghm6wnxcc6h"; depends=[]; };
   zstdr = derive2 { name="zstdr"; version="0.1.1"; sha256="1rigsdh0f68l6vvvxp277cp8hbxj10x4588s6az1njxfpxrc8ajj"; depends=[Rcpp]; };
   ztable = derive2 { name="ztable"; version="0.1.5"; sha256="1jfqnqy9544gfvz3bsb48v4177nwp4b4n9l2743asq8sbq305b5r"; depends=[]; };
   ztype = derive2 { name="ztype"; version="0.1.0"; sha256="0brbq2rgkl4mhjbb70kkfv47lzs66k9ppfs2klavcbripirxn5fx"; depends=[assertthat dplyr ggplot2 lubridate magrittr rvest stringr]; };
diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix
index 4510308d3e56..9ff7d1da71b2 100644
--- a/pkgs/development/r-modules/default.nix
+++ b/pkgs/development/r-modules/default.nix
@@ -42,16 +42,17 @@ let
   # from the name, version, sha256, and optional per-package arguments above
   #
   deriveBioc = mkDerive {
-    mkHomepage = {name, rVersion}: "https://bioconductor.org/packages/${rVersion}/bioc/html/${name}.html";
-    mkUrls = {name, version, rVersion}: [ "mirror://bioc/${rVersion}/bioc/src/contrib/${name}_${version}.tar.gz" ];
+    mkHomepage = {name, biocVersion}: "https://bioconductor.org/packages/${biocVersion}/bioc/html/${name}.html";
+    mkUrls = {name, version, biocVersion}: [ "mirror://bioc/${biocVersion}/bioc/src/contrib/${name}_${version}.tar.gz"
+                                             "mirror://bioc/${biocVersion}/bioc/src/contrib/Archive/${name}_${version}.tar.gz" ];
   };
   deriveBiocAnn = mkDerive {
-    mkHomepage = {name, rVersion}: "http://www.bioconductor.org/packages/${name}.html";
-    mkUrls = {name, version, rVersion}: [ "mirror://bioc/${rVersion}/data/annotation/src/contrib/${name}_${version}.tar.gz" ];
+    mkHomepage = {name, biocVersion}: "http://www.bioconductor.org/packages/${name}.html";
+    mkUrls = {name, version, biocVersion}: [ "mirror://bioc/${biocVersion}/data/annotation/src/contrib/${name}_${version}.tar.gz" ];
   };
   deriveBiocExp = mkDerive {
-    mkHomepage = {name, rVersion}: "http://www.bioconductor.org/packages/${name}.html";
-    mkUrls = {name, version, rVersion}: [ "mirror://bioc/${rVersion}/data/experiment/src/contrib/${name}_${version}.tar.gz" ];
+    mkHomepage = {name, biocVersion}: "http://www.bioconductor.org/packages/${name}.html";
+    mkUrls = {name, version, biocVersion}: [ "mirror://bioc/${biocVersion}/data/experiment/src/contrib/${name}_${version}.tar.gz" ];
   };
   deriveCran = mkDerive {
     mkHomepage = {name, snapshot}: "http://mran.revolutionanalytics.com/snapshot/${snapshot}/web/packages/${name}/";
@@ -230,6 +231,7 @@ let
   packagesWithNativeBuildInputs = {
     abn = [ pkgs.gsl_1 ];
     adimpro = [ pkgs.imagemagick ];
+    animation = [ pkgs.which ];
     audio = [ pkgs.portaudio ];
     BayesSAE = [ pkgs.gsl_1 ];
     BayesVarSel = [ pkgs.gsl_1 ];
@@ -285,7 +287,7 @@ let
     pbdMPI = [ pkgs.openmpi ];
     pbdNCDF4 = [ pkgs.netcdf ];
     pbdPROF = [ pkgs.openmpi ];
-    pbdZMQ = [ pkgs.which ];
+    pbdZMQ = lib.optionals stdenv.isDarwin [ pkgs.which ];
     pdftools = [ pkgs.poppler.dev ];
     PKI = [ pkgs.openssl.dev ];
     png = [ pkgs.libpng.dev ];
@@ -313,7 +315,7 @@ let
     RGtk2 = [ pkgs.gtk2.dev ];
     rhdf5 = [ pkgs.zlib ];
     Rhpc = [ pkgs.zlib pkgs.bzip2.dev pkgs.icu pkgs.lzma.dev pkgs.openmpi pkgs.pcre.dev ];
-    Rhtslib = [ pkgs.zlib.dev ];
+    Rhtslib = [ pkgs.zlib.dev pkgs.automake pkgs.autoconf ];
     RJaCGH = [ pkgs.zlib.dev ];
     rjags = [ pkgs.jags ];
     rJava = [ pkgs.zlib pkgs.bzip2.dev pkgs.icu pkgs.lzma.dev pkgs.pcre.dev pkgs.jdk pkgs.libzip ];
@@ -350,7 +352,6 @@ let
     simplexreg = [ pkgs.gsl_1 ];
     SOD = [ pkgs.opencl-headers ];
     spate = [ pkgs.fftw.dev ];
-    sprint = [ pkgs.openmpi ];
     ssanv = [ pkgs.proj ];
     stsm = [ pkgs.gsl_1 ];
     stringi = [ pkgs.icu.dev ];
@@ -384,7 +385,6 @@ let
     affyio = [ pkgs.zlib.dev ];
     VariantAnnotation = [ pkgs.zlib.dev ];
     snpStats = [ pkgs.zlib.dev ];
-    gputools = [ pkgs.pcre.dev pkgs.lzma.dev pkgs.zlib.dev pkgs.bzip2.dev pkgs.icu.dev ];
   };
 
   packagesWithBuildInputs = {
@@ -393,11 +393,11 @@ let
     nat = [ pkgs.which ];
     nat_nblast = [ pkgs.which ];
     nat_templatebrains = [ pkgs.which ];
+    pbdZMQ = lib.optionals stdenv.isDarwin [ pkgs.binutils.bintools ];
     RMark = [ pkgs.which ];
     RPushbullet = [ pkgs.which ];
     qtpaint = [ pkgs.cmake ];
     qtbase = [ pkgs.cmake pkgs.perl ];
-    gmatrix = [ pkgs.cudatoolkit pkgs.which ];
     RCurl = [ pkgs.curl.dev ];
     R2SWF = [ pkgs.pkgconfig ];
     rggobi = [ pkgs.pkgconfig ];
@@ -426,12 +426,10 @@ let
     tesseract = [ pkgs.pkgconfig ];
     Cairo = [ pkgs.pkgconfig ];
     Rsymphony = [ pkgs.pkgconfig pkgs.doxygen pkgs.graphviz pkgs.subversion ];
-    qtutils = [ pkgs.qt4 ];
     tcltk2 = [ pkgs.tcl pkgs.tk ];
     tikzDevice = [ pkgs.which pkgs.texlive.combined.scheme-medium ];
     rPython = [ pkgs.which ];
     gridGraphics = [ pkgs.which ];
-    gputools = [ pkgs.which pkgs.cudatoolkit ];
     adimpro = [ pkgs.which pkgs.xorg.xdpyinfo ];
     PET = [ pkgs.which pkgs.xorg.xdpyinfo pkgs.imagemagick ];
     dti = [ pkgs.which pkgs.xorg.xdpyinfo pkgs.imagemagick ];
@@ -497,7 +495,6 @@ let
     "EnQuireR"
     "eVenn"
     "exactLoglinTest"
-    "FAiR"
     "fat2Lpoly"
     "fbati"
     "FD"
@@ -518,7 +515,6 @@ let
     "geoR"
     "geoRglm"
     "georob"
-    "GeoXp"
     "GGEBiplotGUI"
     "gnm"
     "GPCSIV"
@@ -534,7 +530,6 @@ let
     "HH"
     "HiveR"
     "HomoPolymer"
-    "iBUGS"
     "ic50"
     "iDynoR"
     "in2extRemes"
@@ -590,10 +585,8 @@ let
     "prefmod"
     "PrevMap"
     "ProbForecastGOP"
-    "QCAGUI"
     "qtbase"
     "qtpaint"
-    "qtutils"
     "R2STATS"
     "r4ss"
     "RandomFields"
@@ -699,16 +692,11 @@ let
 
   packagesToSkipCheck = [
     "Rmpi"     # tries to run MPI processes
-    "gmatrix"  # requires CUDA runtime
-    "gputools" # requires CUDA runtime
-    "sprint"   # tries to run MPI processes
     "pbdMPI"   # tries to run MPI processes
   ];
 
   # Packages which cannot be installed due to lack of dependencies or other reasons.
   brokenPackages = [
-    "gputools"                        # depends on non-free cudatoolkit-8.0.61
-    "gmatrix"                         # depends on non-free cudatoolkit-8.0.61
   ];
 
   otherOverrides = old: new: {
@@ -776,6 +764,14 @@ let
       PKG_LIBS = "-L${pkgs.openblasCompat}/lib -lopenblas";
     });
 
+    pbdZMQ = old.pbdZMQ.overrideDerivation (attrs: {
+      postPatch = lib.optionalString stdenv.isDarwin ''
+        for file in R/*.{r,r.in}; do
+            sed -i 's#system("which \(\w\+\)"[^)]*)#"${pkgs.binutils.bintools}/bin/\1"#g' $file
+        done
+      '';
+    });
+
     qtbase = old.qtbase.overrideDerivation (attrs: {
       patches = [ ./patches/qtbase.patch ];
     });
@@ -831,15 +827,6 @@ let
       patches = [ ./patches/spMC.patch ];
     });
 
-    BayesLogit = old.BayesLogit.overrideDerivation (attrs: {
-      patches = [ ./patches/BayesLogit.patch ];
-      buildInputs = (attrs.buildInputs or []) ++ [ pkgs.openblasCompat ];
-    });
-
-    BayesBridge = old.BayesBridge.overrideDerivation (attrs: {
-      patches = [ ./patches/BayesBridge.patch ];
-    });
-
     openssl = old.openssl.overrideDerivation (attrs: {
       PKGCONFIG_CFLAGS = "-I${pkgs.openssl.dev}/include";
       PKGCONFIG_LIBS = "-Wl,-rpath,${pkgs.openssl.out}/lib -L${pkgs.openssl.out}/lib -lssl -lcrypto";
diff --git a/pkgs/development/r-modules/generate-r-packages.R b/pkgs/development/r-modules/generate-r-packages.R
index 8dc3a50abec5..6614116a3bf6 100755
--- a/pkgs/development/r-modules/generate-r-packages.R
+++ b/pkgs/development/r-modules/generate-r-packages.R
@@ -3,12 +3,12 @@ library(data.table)
 library(parallel)
 cl <- makeCluster(10)
 
-rVersion <- paste(R.Version()$major, strsplit(R.Version()$minor, ".", fixed=TRUE)[[1]][1], sep=".")
+biocVersion <- 3.6
 snapshotDate <- Sys.Date()-1
 
-mirrorUrls <- list( bioc=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", rVersion, "/bioc/src/contrib/")
-                  , "bioc-annotation"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", rVersion, "/data/annotation/src/contrib/")
-                  , "bioc-experiment"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", rVersion, "/data/experiment/src/contrib/")
+mirrorUrls <- list( bioc=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/bioc/src/contrib/")
+                  , "bioc-annotation"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/data/annotation/src/contrib/")
+                  , "bioc-experiment"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/data/experiment/src/contrib/")
                   , cran=paste0("http://mran.revolutionanalytics.com/snapshot/", snapshotDate, "/src/contrib/")
                   )
 
@@ -81,7 +81,7 @@ cat("{ self, derive }:\n")
 cat("let derive2 = derive ")
 if (mirrorType == "cran") { cat("{ snapshot = \"", paste(snapshotDate), "\"; }", sep="")
 } else if (mirrorType == "irkernel") { cat("{}")
-} else { cat("{ rVersion = \"", rVersion, "\"; }", sep="") }
+} else { cat("{ biocVersion = \"", biocVersion, "\"; }", sep="") }
 cat(";\n")
 cat("in with self; {\n")
 cat(paste(nix, collapse="\n"), "\n", sep="")
diff --git a/pkgs/development/r-modules/patches/BayesBridge.patch b/pkgs/development/r-modules/patches/BayesBridge.patch
deleted file mode 100644
index 2fb0392bf3e9..000000000000
--- a/pkgs/development/r-modules/patches/BayesBridge.patch
+++ /dev/null
@@ -1,9 +0,0 @@
-diff -ru -x '*~' BayesBridge_orig/src/Makevars BayesBridge/src/Makevars
---- BayesBridge_orig/src/Makevars	2014-07-19 05:08:55.000000000 +0900
-+++ BayesBridge/src/Makevars	2014-10-25 18:35:01.398539305 +0900
-@@ -9,4 +9,4 @@
- # PKG_CPPFLAGS = -DUSE_R -DDISABLE_FIO -I../inst/include/ -DDISABLE_SINGLE -DNTHROW
- PKG_CPPFLAGS = -DUSE_R -DDISABLE_FIO -DDISABLE_SINGLE -DNTHROW
- # PKG_CPPFLAGS = -DUSE_R -DDISABLE_SINGLE -DNTHROW -Wall -pedantic -Wshadow  -ansi -Wsequence-point
--PKG_LIBS = $(BLAS_LIBS) $(FLIBS) $(LAPACK_LIBS) 
-+PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS)
diff --git a/pkgs/development/r-modules/patches/BayesLogit.patch b/pkgs/development/r-modules/patches/BayesLogit.patch
deleted file mode 100644
index 83c865e479c2..000000000000
--- a/pkgs/development/r-modules/patches/BayesLogit.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-diff -ru -x '*~' BayesLogit_orig/src/Makevars BayesLogit/src/Makevars
---- BayesLogit_orig/src/Makevars	2014-04-24 23:31:13.000000000 +0900
-+++ BayesLogit/src/Makevars	2014-10-25 18:33:32.398572641 +0900
-@@ -6,7 +6,7 @@
- ## W/OUT Dynamic Stuff
- OBJECTS = Matrix.o MatrixFrame.o RRNG.o RNG.o FSF_nmix.o LogitWrapper.o \
- 	PolyaGamma.o PolyaGammaAlt.o PolyaGammaSP.o InvertY.o
--PKG_LIBS = $(BLAS_LIBS) $(FLIBS) $(LAPACK_LIBS) 
-+PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS)
- # PKG_CPPFLAGS = -DUSE_R -DNDEBUG -DDISABLE_SINGLE -DNTHROW -Wall -pedantic -Wextra
- PKG_CPPFLAGS = -DUSE_R -DNDEBUG -DDISABLE_SINGLE -DNTHROW 
- 
diff --git a/pkgs/development/ruby-modules/gem-config/default.nix b/pkgs/development/ruby-modules/gem-config/default.nix
index 5361c3ce65eb..8da6355e0016 100644
--- a/pkgs/development/ruby-modules/gem-config/default.nix
+++ b/pkgs/development/ruby-modules/gem-config/default.nix
@@ -87,6 +87,14 @@ in
       sed -i $installPath/lib/dep-selector-libgecode.rb -e 's@VENDORED_GECODE_DIR =.*@VENDORED_GECODE_DIR = "${gecode_3}"@'
     '';
   };
+  
+  ethon = attrs: {
+    dontBuild = false;
+    postPatch = ''
+      substituteInPlace lib/ethon/curls/settings.rb \
+        --replace "libcurl" "${curl.out}/lib/libcurl${stdenv.hostPlatform.extensions.sharedLibrary}"
+    '';
+  }; 
 
   eventmachine = attrs: {
     buildInputs = [ openssl ];
diff --git a/pkgs/development/tools/analysis/flow/default.nix b/pkgs/development/tools/analysis/flow/default.nix
index f90893ee79de..4a2d298495da 100644
--- a/pkgs/development/tools/analysis/flow/default.nix
+++ b/pkgs/development/tools/analysis/flow/default.nix
@@ -4,14 +4,14 @@
 with lib;
 
 stdenv.mkDerivation rec {
-  version = "0.64.0";
+  version = "0.66.0";
   name = "flow-${version}";
 
   src = fetchFromGitHub {
     owner = "facebook";
     repo = "flow";
     rev = "v${version}";
-    sha256 = "1jvx2vx1d3n5z689zqm0gylmmjxim176avinwn3q8xla3gz3srp8";
+    sha256 = "0l1sdd1n0llmz8m81vym3zhcn824sr9w46h9jpb7i7wrcm4y410d";
   };
 
   installPhase = ''
diff --git a/pkgs/development/tools/analysis/radare2-cutter/default.nix b/pkgs/development/tools/analysis/radare2-cutter/default.nix
new file mode 100644
index 000000000000..3cd1d309e15d
--- /dev/null
+++ b/pkgs/development/tools/analysis/radare2-cutter/default.nix
@@ -0,0 +1,48 @@
+{ stdenv, fetchFromGitHub, fetchpatch, qmake, pkgconfig, qtbase, qtsvg, radare2 }:
+
+
+stdenv.mkDerivation rec {
+  name = "radare2-cutter-${version}";
+  version = "1.1";
+
+  src = fetchFromGitHub {
+    owner = "radareorg";
+    repo = "cutter";
+    rev = "v${version}";
+    sha256 = "02m5sf45n455hn34y7hrqanj830rc5xhz2ppp1z3mzbz0s515pfl";
+  };
+
+  postUnpack = "export sourceRoot=$sourceRoot/src";
+
+  patches = [
+    # Fixup version number :D
+    (fetchpatch {
+      url = "https://github.com/radareorg/cutter/commit/69506b64600df632afdca8b680baa7d946c78644.patch";
+      sha256 = "0ks3ixz8bycjcfi26bd0p6z7qaplhq00alw44hsfzpdm4bmr01x0";
+    })
+    (fetchpatch {
+      url = "https://github.com/radareorg/cutter/commit/8b52c66f4f0091cd9d97389b32aa519c2c602e2b.patch";
+      sha256 = "0wcdn35lx2943pfzm7mkg4sr82pm0qz3yxf74m8fxbd70s3w0gkm";
+    })
+
+    # case-insensitive filtering
+    (fetchpatch {
+      url = "https://github.com/radareorg/cutter/commit/0ebd34370bcaed00000168147572bb78106eeab1.patch";
+      sha256 = "0sc50jwhncfnd2i5mlyld4dbdzi2ws7nh4yglkhlap9l9h1jxn20";
+    })
+  ];
+
+  patchFlags = [ "-p2" ];
+
+  nativeBuildInputs = [ qmake pkgconfig ];
+  buildInputs = [ qtbase qtsvg radare2 ];
+
+  enableParallelBuilding = true;
+
+  meta = with stdenv.lib; {
+    description = "A Qt and C++ GUI for radare2 reverse engineering framework";
+    homepage = src.meta.homepage;
+    license = licenses.gpl3;
+    maintainers = with maintainers; [ dtzWill ];
+  };
+}
diff --git a/pkgs/development/tools/analysis/radare2/default.nix b/pkgs/development/tools/analysis/radare2/default.nix
index 49f6aeb72799..6a7992b01311 100644
--- a/pkgs/development/tools/analysis/radare2/default.nix
+++ b/pkgs/development/tools/analysis/radare2/default.nix
@@ -1,4 +1,4 @@
-{stdenv, fetchFromGitHub, fetchurl, fetchpatch, pkgconfig, libusb, readline, libewf, perl, zlib, openssl,
+{stdenv, fetchFromGitHub, fetchgit, fetchurl, fetchpatch, pkgconfig, libusb, readline, libewf, perl, zlib, openssl, git,
 gtk2 ? null, vte ? null, gtkdialog ? null,
 python ? null,
 ruby ? null,
@@ -13,32 +13,33 @@ let
   inherit (stdenv.lib) optional;
 in
 stdenv.mkDerivation rec {
-  version = "2.2.0";
+  version = "2.3.0";
   name = "radare2-${version}";
 
   src = fetchFromGitHub {
     owner = "radare";
     repo = "radare2";
     rev = version;
-    sha256 = "0rd1dfgwdpn3x1pzi67sw040vxywbg5h6yw0mj317p0p1cvlyihl";
+    sha256 = "0x5vcprqf0fnj876mdvryfvg7ymbrw1cxrr7a06v0swg7yql1lpw";
   };
 
   postPatch = let
-    cs_ver = "3.0.4"; # version from $sourceRoot/shlr/Makefile
-    capstone = fetchurl {
-      url = "https://github.com/aquynh/capstone/archive/${cs_ver}.tar.gz";
-      sha256 = "1whl5c8j6vqvz2j6ay2pyszx0jg8d3x8hq66cvgghmjchvsssvax";
+    cs_tip = "bdbc57de63725a98732ddc34b48de96f8ada66f2"; # version from $sourceRoot/shlr/Makefile
+    capstone = fetchgit {
+      url = "https://github.com/aquynh/capstone.git";
+      rev = cs_tip;
+      sha256 = "1sqxpjf2dlrg87dm9p39p5d1qzahrnfnrjijpv1xg1shax439jni";
+      leaveDotGit = true;
     };
   in ''
-    if ! grep -F "CS_VER=${cs_ver}" shlr/Makefile; then echo "CS_VER mismatch"; exit 1; fi
-    substituteInPlace shlr/Makefile --replace CS_RELEASE=0 CS_RELEASE=1
-    cp ${capstone} shlr/capstone-${cs_ver}.tar.gz
-
+    if ! grep -F "CS_TIP=${cs_tip}" shlr/Makefile; then echo "CS_TIP mismatch"; exit 1; fi
+    cp -r ${capstone} shlr/capstone
+    chmod -R u+rw shlr/capstone
   '';
 
   enableParallelBuilding = true;
 
-  nativeBuildInputs = [ pkgconfig ];
+  nativeBuildInputs = [ pkgconfig git ];
   buildInputs = [ readline libusb libewf perl zlib openssl]
     ++ optional useX11 [gtkdialog vte gtk2]
     ++ optional rubyBindings [ruby]
diff --git a/pkgs/development/tools/asn2quickder/default.nix b/pkgs/development/tools/asn2quickder/default.nix
index 812053902a57..e0b9aec9ee15 100644
--- a/pkgs/development/tools/asn2quickder/default.nix
+++ b/pkgs/development/tools/asn2quickder/default.nix
@@ -1,30 +1,25 @@
-{ stdenv, fetchFromGitHub, python2Packages, makeWrapper }:
+{ stdenv, buildPythonApplication, fetchFromGitHub, makeWrapper, cmake
+, pytestrunner, pytest, six, pyparsing, asn1ate }:
 
-stdenv.mkDerivation rec {
+buildPythonApplication rec {
   pname = "asn2quickder";
-  name = "${pname}-${version}";
-  version = "0.7-RC1";
+  version = "1.2-6";
 
   src = fetchFromGitHub {
-    sha256 = "0ynajhbml28m4ipbj5mscjcv6g1a7frvxfimxh813rhgl0w3sgq8";
+    sha256 = "00wifjydgmqw2i5vmr049visc3shjqccgzqynkmmhkjhs86ghzr6";
     rev = "version-${version}";
     owner = "vanrein";
-    repo = "${pname}";
+    repo = "quick-der";
   };
 
-  propagatedBuildInputs = with python2Packages; [ pyparsing makeWrapper ];
+  patchPhase = ''
+    patchShebangs ./python/scripts/*
+  '';
 
-  patchPhase = with python2Packages; ''
-    substituteInPlace Makefile \
-      --replace '..' '..:$(DESTDIR)/${python.sitePackages}:${python2Packages.pyparsing}/${python.sitePackages}' \
-    '';
+  buildInputs = [ makeWrapper cmake ];
+  checkInputs = [ pytestrunner pytest ];
 
-  installPhase = ''
-    mkdir -p $out/${python2Packages.python.sitePackages}/
-    mkdir -p $out/bin $out/lib $out/sbin $out/man
-    make DESTDIR=$out PREFIX=/ all
-    make DESTDIR=$out PREFIX=/ install
-    '';
+  propagatedBuildInputs = [ pyparsing asn1ate six ];
 
   meta = with stdenv.lib; {
     description = "An ASN.1 compiler with a backend for Quick DER";
diff --git a/pkgs/development/tools/boomerang/default.nix b/pkgs/development/tools/boomerang/default.nix
index 6b9dd6393cb6..f83353034a8f 100644
--- a/pkgs/development/tools/boomerang/default.nix
+++ b/pkgs/development/tools/boomerang/default.nix
@@ -1,38 +1,43 @@
-{ stdenv, fetchgit, cmake, expat, qt5, boost }:
+{ stdenv, fetchFromGitHub, cmake, qtbase }:
 
 stdenv.mkDerivation rec {
   name = "boomerang-${version}";
-  version = "0.3.99-alpha-2016-11-02";
+  version = "0.4.0-alpha-2018-01-18";
 
-  src = fetchgit {
-    url = "https://github.com/nemerle/boomerang.git";
-    rev = "f95d6436845e9036c8cfbd936731449475f79b7a";
-    sha256 = "1q3q92lfj24ij5sxdbdhcqyan28r6db1w80yrks4csf9zjij1ixh";
+  src = fetchFromGitHub {
+    owner = "ceeac";
+    repo = "boomerang";
+    rev = "b4ff8d573407a8ed6365d4bfe53d2d47d983e393";
+    sha256 = "0x17vlm6y1paa49fi3pmzz7vzdqms19qkr274hkq32ql342b6i6x";
   };
 
-  buildInputs = [ cmake expat qt5.qtbase boost ];
-
-  patches = [ ./fix-install.patch ./fix-output.patch ];
-
-  postPatch = ''
-    substituteInPlace loader/BinaryFileFactory.cpp \
-      --replace '"lib"' '"../lib"'
-
-    substituteInPlace ui/DecompilerThread.cpp \
-      --replace '"output"' '"./output"'
-
-    substituteInPlace boomerang.cpp \
-      --replace 'progPath("./")' "progPath(\"$out/share/boomerang/\")"
-
-    substituteInPlace ui/commandlinedriver.cpp \
-      --replace "QFileInfo(args[0]).absolutePath()" "\"$out/share/boomerang/\""
+  nativeBuildInputs = [ cmake ];
+  buildInputs = [ qtbase ];
+
+  postPatch =
+  # Look in installation directory for required files, not relative to working directory
+  ''
+    substituteInPlace src/boomerang/core/Settings.cpp \
+      --replace "setDataDirectory(\"../share/boomerang\");" \
+                "setDataDirectory(\"$out/share/boomerang\");" \
+      --replace "setPluginDirectory(\"../lib/boomerang/plugins\");" \
+                "setPluginDirectory(\"$out/lib/boomerang/plugins\");"
+  ''
+  # Fixup version:
+  # * don't try to inspect with git
+  #   (even if we kept .git and such it would be "dirty" because of patching)
+  # * use date so version is monotonically increasing moving forward
+  + ''
+    sed -i cmake-scripts/boomerang-version.cmake \
+      -e 's/set(\(PROJECT\|BOOMERANG\)_VERSION ".*")/set(\1_VERSION "${version}")/'
   '';
 
   enableParallelBuilding = true;
 
-  meta = {
+  meta = with stdenv.lib; {
     homepage = http://boomerang.sourceforge.net/;
-    license = stdenv.lib.licenses.bsd3;
+    license = licenses.bsd3;
     description = "A general, open source, retargetable decompiler";
+    maintainers = with maintainers; [ dtzWill ];
   };
 }
diff --git a/pkgs/development/tools/boomerang/fix-install.patch b/pkgs/development/tools/boomerang/fix-install.patch
deleted file mode 100644
index bc656acfd6a5..000000000000
--- a/pkgs/development/tools/boomerang/fix-install.patch
+++ /dev/null
@@ -1,48 +0,0 @@
-From 5851256422a4debc34c956439d8129a4d5f80722 Mon Sep 17 00:00:00 2001
-From: Will Dietz <w@wdtz.org>
-Date: Thu, 30 Mar 2017 10:06:03 -0500
-Subject: [PATCH] cmake: add install bits
-
----
- CMakeLists.txt        | 3 +++
- loader/CMakeLists.txt | 2 ++
- ui/CMakeLists.txt     | 2 ++
- 3 files changed, 7 insertions(+)
-
-diff --git a/CMakeLists.txt b/CMakeLists.txt
-index 826fe307..740861db 100644
---- a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -113,3 +113,6 @@ SET_PROPERTY(TARGET boom_base PROPERTY CXX_STANDARD_REQUIRED ON)
- 
- ADD_SUBDIRECTORY(loader)
- ADD_SUBDIRECTORY(ui)
-+
-+INSTALL(DIRECTORY signatures DESTINATION share/boomerang)
-+INSTALL(DIRECTORY frontend/machine DESTINATION share/boomerang/frontend)
-diff --git a/loader/CMakeLists.txt b/loader/CMakeLists.txt
-index b371d366..dcf715fd 100644
---- a/loader/CMakeLists.txt
-+++ b/loader/CMakeLists.txt
-@@ -6,6 +6,8 @@ macro(BOOMERANG_ADD_LOADER name)
-     endif()
-     qt5_use_modules(${target_name} Core)
-     set_target_properties(${target_name} PROPERTIES LIBRARY_OUTPUT_DIRECTORY "${PROJECT_SOURCE_DIR}/out/lib")
-+    install(TARGETS "${target_name}"
-+      LIBRARY DESTINATION lib)
- endmacro()
- 
- BOOMERANG_ADD_LOADER(Elf      elf/ElfBinaryFile.cpp elf/ElfBinaryFile.h)
-diff --git a/ui/CMakeLists.txt b/ui/CMakeLists.txt
-index f6fe3271..8729b522 100644
---- a/ui/CMakeLists.txt
-+++ b/ui/CMakeLists.txt
-@@ -26,3 +26,5 @@ boom_base frontend db type boomerang_DSLs codegen util boom_base
- ${CMAKE_THREAD_LIBS_INIT} boomerang_passes
- )
- qt5_use_modules(boomerang Core Xml Widgets)
-+
-+INSTALL(TARGETS boomerang DESTINATION bin)
--- 
-2.11.0
-
diff --git a/pkgs/development/tools/boomerang/fix-output.patch b/pkgs/development/tools/boomerang/fix-output.patch
deleted file mode 100644
index 18fbe74177b3..000000000000
--- a/pkgs/development/tools/boomerang/fix-output.patch
+++ /dev/null
@@ -1,24 +0,0 @@
-From f3f5f888a1b1fe72ea8fc8cc96ef4ee386011e1c Mon Sep 17 00:00:00 2001
-From: Will Dietz <w@wdtz.org>
-Date: Thu, 30 Mar 2017 11:21:38 -0500
-Subject: [PATCH] don't default to writing to program directory
-
----
- boomerang.cpp | 1 -
- 1 file changed, 1 deletion(-)
-
-diff --git a/boomerang.cpp b/boomerang.cpp
-index 5951ed91..b592f482 100644
---- a/boomerang.cpp
-+++ b/boomerang.cpp
-@@ -601,7 +601,6 @@ int Boomerang::processCommand(QStringList &args) {
-  */
- void Boomerang::setProgPath(const QString &p) {
-     progPath = p + "/";
--    outputPath = progPath + "/output/"; // Default output path (can be overridden with -o below)
- }
- 
- /**
--- 
-2.11.0
-
diff --git a/pkgs/development/tools/build-managers/arpa2cm/default.nix b/pkgs/development/tools/build-managers/arpa2cm/default.nix
new file mode 100644
index 000000000000..0aec7491e4ad
--- /dev/null
+++ b/pkgs/development/tools/build-managers/arpa2cm/default.nix
@@ -0,0 +1,22 @@
+{ stdenv, fetchFromGitHub, cmake }:
+
+stdenv.mkDerivation rec {
+  pname = "arpa2cm";
+  version = "0.5";
+  name = "${pname}-${version}";
+
+  src = fetchFromGitHub {
+    sha256 = "093h7njj8d8iiwnw5byfxkkzlbny60fwv1w57j8f1lsd4yn6rih4";
+    rev = "version-${version}";
+    repo = "${pname}";
+    owner = "arpa2";
+  };
+
+  buildInputs = [ cmake ];
+
+  meta = with stdenv.lib; {
+    description = "CMake Module library for the ARPA2 project";
+    license = licenses.bsd2;
+    maintainers = with maintainers; [ leenaars ];
+  };
+}
diff --git a/pkgs/development/tools/build-managers/bazel/default.nix b/pkgs/development/tools/build-managers/bazel/default.nix
index 67d186c5a257..6e974b7e93d6 100644
--- a/pkgs/development/tools/build-managers/bazel/default.nix
+++ b/pkgs/development/tools/build-managers/bazel/default.nix
@@ -6,7 +6,7 @@
 
 stdenv.mkDerivation rec {
 
-  version = "0.9.0";
+  version = "0.10.1";
 
   meta = with stdenv.lib; {
     homepage = "https://github.com/bazelbuild/bazel/";
@@ -20,7 +20,7 @@ stdenv.mkDerivation rec {
 
   src = fetchurl {
     url = "https://github.com/bazelbuild/bazel/releases/download/${version}/bazel-${version}-dist.zip";
-    sha256 = "0aiifrp6g1d3ilhg8111wdhsrjy41x8gcmq67rjyxypw9znqzcpg";
+    sha256 = "0rz6zvkzyglf0mmc178avf52zynz487m4v0089ilsbrgv7v4i0kh";
   };
 
   sourceRoot = ".";
diff --git a/pkgs/development/tools/build-managers/bear/default.nix b/pkgs/development/tools/build-managers/bear/default.nix
index 2bfec89aa660..6afec72de5fd 100644
--- a/pkgs/development/tools/build-managers/bear/default.nix
+++ b/pkgs/development/tools/build-managers/bear/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "bear-${version}";
-  version = "2.2.1";
+  version = "2.3.11";
 
   src = fetchFromGitHub {
     owner = "rizsotto";
     repo = "Bear";
     rev = version;
-    sha256 = "1rwar5nvvhfqws4nwyifaysqs3nxpphp48lx9mdg5n6l4z7drz0n";
+    sha256 = "0r6ykvclq9ws055ssd8w33dicmk5l9pisv0fpzkks700n8d3z9f3";
   };
 
   nativeBuildInputs = [ cmake ];
@@ -31,4 +31,3 @@ stdenv.mkDerivation rec {
     maintainers = [ maintainers.vcunat ];
   };
 }
-
diff --git a/pkgs/development/tools/build-managers/bear/ignore_wrapper.patch b/pkgs/development/tools/build-managers/bear/ignore_wrapper.patch
index 16d7a9bfd3e4..f70e3811f654 100644
--- a/pkgs/development/tools/build-managers/bear/ignore_wrapper.patch
+++ b/pkgs/development/tools/build-managers/bear/ignore_wrapper.patch
@@ -1,31 +1,23 @@
---- Bear-2.2.1-src/bear/main.py.in	1970-01-01 01:00:01.000000000 +0100
-+++ Bear-2.2.1-src-patch/bear/main.py.in	2016-11-02 20:23:38.050134984 +0100
-@@ -48,6 +48,7 @@
+--- Bear-2.3.11-src/bear/main.py.in	1970-01-01 01:00:01.000000000 +0100
++++ Bear-2.3.11-src-patch/bear/main.py.in	1970-01-01 01:00:01.000000000 +0100
+@@ -49,6 +49,7 @@
  import shutil
  import contextlib
  import logging
 +from distutils.spawn import find_executable
  
- # Ignored compiler options map for compilation database creation.
- # The map is used in `split_command` method. (Which does ignore and classify
-@@ -447,7 +448,6 @@
-     # do extra check on number of source files
-     return result if result.files else None
+ # Map of ignored compiler option for the creation of a compilation database.
+ # This map is used in _split_command method, which classifies the parameters
+@@ -540,7 +541,11 @@
+                 any(pattern.match(cmd) for pattern in COMPILER_PATTERNS_CXX)
  
--
- def split_compiler(command):
-     """ A predicate to decide the command is a compiler call or not.
- 
-@@ -467,7 +467,11 @@
-                    for pattern in COMPILER_CPP_PATTERNS)
- 
-     if command:  # not empty list will allow to index '0' and '1:'
--        executable = os.path.basename(command[0])
-+        absolute_executable = os.path.realpath(find_executable(command[0]))
-+        if 'wrapper' in absolute_executable:
-+            return None
+         if command:  # not empty list will allow to index '0' and '1:'
+-            executable = os.path.basename(command[0])  # type: str
++            absolute_executable = os.path.realpath(find_executable(command[0]))
++            if 'wrapper' in absolute_executable:
++                return None
 +
-+        executable = os.path.basename(absolute_executable)
-         parameters = command[1:]
-         # 'wrapper' 'parameters' and
-         # 'wrapper' 'compiler' 'parameters' are valid.
++            executable = os.path.basename(absolute_executable) # type: str
+             parameters = command[1:]  # type: List[str]
+             # 'wrapper' 'parameters' and
+             # 'wrapper' 'compiler' 'parameters' are valid.
\ No newline at end of file
diff --git a/pkgs/development/tools/build-managers/cask/default.nix b/pkgs/development/tools/build-managers/cask/default.nix
new file mode 100644
index 000000000000..234dab99c03c
--- /dev/null
+++ b/pkgs/development/tools/build-managers/cask/default.nix
@@ -0,0 +1,11 @@
+{ emacsPackagesNg, writeScriptBin }:
+let
+
+  emacs = emacsPackagesNg.emacsWithPackages (epkgs: [ epkgs.cask-package-toolset ]);
+  cpt = emacsPackagesNg.cask-package-toolset;
+
+in writeScriptBin "cask" ''
+#!/bin/sh
+
+exec ${emacs}/bin/emacs --script ${cpt}/share/emacs/site-lisp/elpa/cask-package-toolset-${cpt.version}/cask-package-toolset.el -- "$@"
+''
diff --git a/pkgs/development/tools/build-managers/cmake/default.nix b/pkgs/development/tools/build-managers/cmake/default.nix
index fed88561cf9c..97c02cd9cc12 100644
--- a/pkgs/development/tools/build-managers/cmake/default.nix
+++ b/pkgs/development/tools/build-managers/cmake/default.nix
@@ -83,11 +83,25 @@ stdenv.mkDerivation rec {
   configureFlags = [ "--docdir=share/doc/${name}" ]
     ++ (if useSharedLibraries then [ "--no-system-jsoncpp" "--system-libs" ] else [ "--no-system-libs" ]) # FIXME: cleanup
     ++ optional (useQt4 || withQt5) "--qt-gui"
-    ++ optionals (!useNcurses) [ "--" "-DBUILD_CursesDialog=OFF" ];
+    ++ ["--"]
+    ++ optionals (!useNcurses) [ "-DBUILD_CursesDialog=OFF" ]
+    ++ optionals (stdenv.buildPlatform != stdenv.hostPlatform) [
+      "-DCMAKE_CXX_COMPILER=${stdenv.cc.targetPrefix}c++"
+      "-DCMAKE_C_COMPILER=${stdenv.cc.targetPrefix}cc"
+      "-DCMAKE_AR=${getBin stdenv.cc.bintools.bintools}/bin/${stdenv.cc.targetPrefix}ar"
+      "-DCMAKE_RANLIB=${getBin stdenv.cc.bintools.bintools}/bin/${stdenv.cc.targetPrefix}ranlib"
+      "-DCMAKE_STRIP=${getBin stdenv.cc.bintools.bintools}/bin/${stdenv.cc.targetPrefix}strip"
+      # TODO: Why are ar and friends not provided by the bintools wrapper?
+    ];
 
   dontUseCmakeConfigure = true;
   enableParallelBuilding = true;
 
+  # This isn't an autoconf configure script; triples are passed via
+  # CMAKE_SYSTEM_NAME, etc.
+  configurePlatforms = [ ];
+
+
   meta = with stdenv.lib; {
     homepage = http://www.cmake.org/;
     description = "Cross-Platform Makefile Generator";
diff --git a/pkgs/development/tools/build-managers/cmake/setup-hook.sh b/pkgs/development/tools/build-managers/cmake/setup-hook.sh
index a0f1cf00814c..c796c31cb70a 100755
--- a/pkgs/development/tools/build-managers/cmake/setup-hook.sh
+++ b/pkgs/development/tools/build-managers/cmake/setup-hook.sh
@@ -33,7 +33,15 @@ cmakeConfigurePhase() {
         # By now it supports linux builds only. We should set the proper
         # CMAKE_SYSTEM_NAME otherwise.
         # http://www.cmake.org/Wiki/CMake_Cross_Compiling
-        cmakeFlags="-DCMAKE_CXX_COMPILER=$crossConfig-g++ -DCMAKE_C_COMPILER=$crossConfig-gcc $cmakeFlags"
+        #
+        # Unfortunately cmake seems to expect absolute paths for ar, ranlib, and
+        # strip. Otherwise they are taken to be relative to the source root of
+        # the package being built.
+        cmakeFlags="-DCMAKE_CXX_COMPILER=$crossConfig-c++ $cmakeFlags"
+        cmakeFlags="-DCMAKE_C_COMPILER=$crossConfig-cc $cmakeFlags"
+        cmakeFlags="-DCMAKE_AR=$(command -v $crossConfig-ar) $cmakeFlags"
+        cmakeFlags="-DCMAKE_RANLIB=$(command -v $crossConfig-ranlib) $cmakeFlags"
+        cmakeFlags="-DCMAKE_STRIP=$(command -v $crossConfig-strip) $cmakeFlags"
     fi
 
     # This installs shared libraries with a fully-specified install
diff --git a/pkgs/development/tools/build-managers/dub/default.nix b/pkgs/development/tools/build-managers/dub/default.nix
index 8af11f057380..da404a63d85f 100644
--- a/pkgs/development/tools/build-managers/dub/default.nix
+++ b/pkgs/development/tools/build-managers/dub/default.nix
@@ -4,7 +4,7 @@ let
 
   dubBuild = stdenv.mkDerivation rec {
     name = "dubBuild-${version}";
-    version = "1.7.1";
+    version = "1.7.2";
 
     enableParallelBuilding = true;
 
@@ -12,9 +12,13 @@ let
       owner = "dlang";
       repo = "dub";
       rev = "v${version}";
-      sha256 = "09bcc9bq2z1rbm8sdip1l81y5p8q13r30k02lzifyasiplrnpvlv";
+      sha256 = "073ibvgm1gphcqs1yjrav9ryp677nh3b194nxmvicwgvdc0sb6w9";
     };
 
+    postUnpack = ''
+        patchShebangs .
+    '';
+
     patches = [
       # TODO Remove with next release which contains https://github.com/dlang/dub/pull/1354
       (fetchpatch {
@@ -23,12 +27,11 @@ let
       })
     ];
 
+    # Can be removed with https://github.com/dlang/dub/pull/1368
+    dubvar = "\\$DUB";
     postPatch = ''
-      # Avoid that the version file is overwritten
-      substituteInPlace build.sh \
-        --replace source/dub/version_.d /dev/null
-
-      patchShebangs .
+        substituteInPlace test/fetchzip.sh \
+            --replace "dub remove" "\"${dubvar}\" remove"
     '';
 
     nativeBuildInputs = [ dmd libevent rsync ];
@@ -70,6 +73,7 @@ let
     
     patches = dubBuild.patches;
 
+    postUnpack = dubBuild.postUnpack;
     postPatch = dubBuild.postPatch;
 
     nativeBuildInputs = dubBuild.nativeBuildInputs;
diff --git a/pkgs/development/tools/build-managers/gnumake/4.2/default.nix b/pkgs/development/tools/build-managers/gnumake/4.2/default.nix
index 7914d8ebb4f8..e175205143fc 100644
--- a/pkgs/development/tools/build-managers/gnumake/4.2/default.nix
+++ b/pkgs/development/tools/build-managers/gnumake/4.2/default.nix
@@ -22,7 +22,7 @@ stdenv.mkDerivation {
     ./pselect.patch
   ];
 
-  nativeBuildInputs = [ pkgconfig ];
+  nativeBuildInputs = stdenv.lib.optionals guileSupport [ pkgconfig ];
   buildInputs = stdenv.lib.optionals guileSupport [ guile ];
 
   configureFlags = stdenv.lib.optional guileSupport "--with-guile";
diff --git a/pkgs/development/tools/build-managers/gnumake/4.2/glibc-2.27.patch b/pkgs/development/tools/build-managers/gnumake/4.2/glibc-2.27.patch
new file mode 100644
index 000000000000..c2639c6cc927
--- /dev/null
+++ b/pkgs/development/tools/build-managers/gnumake/4.2/glibc-2.27.patch
@@ -0,0 +1,24 @@
+From 48c8a116a914a325a0497721f5d8b58d5bba34d4 Mon Sep 17 00:00:00 2001
+From: Paul Smith <psmith@gnu.org>
+Date: Sun, 19 Nov 2017 15:09:16 -0500
+Subject: * configure.ac: Support GLIBC glob interface version 2
+
+---
+ configure.ac | 3 +--
+ 1 file changed, 1 insertion(+), 2 deletions(-)
+
+diff -Naur a/configure b/configure
+--- configure	2016-06-10 19:03:21.000000000 -0400
++++ configure	2018-02-18 04:40:32.971371555 -0500
+@@ -11481,10 +11481,9 @@
+ #include <glob.h>
+ #include <fnmatch.h>
+ 
+-#define GLOB_INTERFACE_VERSION 1
+ #if !defined _LIBC && defined __GNU_LIBRARY__ && __GNU_LIBRARY__ > 1
+ # include <gnu-versions.h>
+-# if _GNU_GLOB_INTERFACE_VERSION == GLOB_INTERFACE_VERSION
++# if _GNU_GLOB_INTERFACE_VERSION == 1 || _GNU_GLOB_INTERFACE_VERSION == 2
+    gnu glob
+ # endif
+ #endif
diff --git a/pkgs/development/tools/build-managers/gnumake/4.2/head.nix b/pkgs/development/tools/build-managers/gnumake/4.2/head.nix
new file mode 100644
index 000000000000..5f3ae10c3e5b
--- /dev/null
+++ b/pkgs/development/tools/build-managers/gnumake/4.2/head.nix
@@ -0,0 +1,69 @@
+{ stdenv, fetchurl, texinfo, guileSupport ? false, pkgconfig , guile ? null, autoreconfHook }:
+
+assert guileSupport -> ( guile != null );
+
+let
+  version = "4.2.90";
+  revision = "48c8a116a914a325a0497721f5d8b58d5bba34d4";
+  revCount = "2491";
+  shortRev = "48c8a11";
+
+  baseVersion = "4.2.1";
+  baseTarball = fetchurl {
+    url = "mirror://gnu/make/make-${baseVersion}.tar.bz2";
+    sha256 = "12f5zzyq2w56g95nni65hc0g5p7154033y2f3qmjvd016szn5qnn";
+  };
+in
+stdenv.mkDerivation {
+  name = "gnumake-${version}pre${revCount}_${shortRev}";
+
+  src = fetchurl {
+    url = "http://git.savannah.gnu.org/cgit/make.git/snapshot/make-${revision}.tar.gz";
+    sha256 = "0k6yvhr2a5lh1qhflv02dyvq5p20ikgaakm8w6gr4xmkspljwpwx";
+  };
+
+  postUnpack = ''
+    unpackFile ${baseTarball}
+    cp make-${baseVersion}/po/*.po $sourceRoot/po
+    cp make-${baseVersion}/doc/{fdl,make-stds}.texi $sourceRoot/doc
+  '';
+
+  patches = [
+    # Purity: don't look for library dependencies (of the form `-lfoo') in /lib
+    # and /usr/lib. It's a stupid feature anyway. Likewise, when searching for
+    # included Makefiles, don't look in /usr/include and friends.
+    ./impure-dirs-head.patch
+  ];
+
+  postPatch = ''
+    # These aren't in the 4.2.1 tarball yet.
+    sed -i -e 's/sr//' -e 's/zh_TW//' po/LINGUAS
+  '';
+
+  nativeBuildInputs = [ autoreconfHook pkgconfig texinfo ];
+  buildInputs = stdenv.lib.optional guileSupport guile;
+
+  configureFlags = stdenv.lib.optional guileSupport "--with-guile";
+
+  outputs = [ "out" "man" "info" ];
+
+  meta = with stdenv.lib; {
+    homepage = http://www.gnu.org/software/make/;
+    description = "A tool to control the generation of non-source files from sources";
+    license = licenses.gpl3Plus;
+
+    longDescription = ''
+      Make is a tool which controls the generation of executables and
+      other non-source files of a program from the program's source files.
+
+      Make gets its knowledge of how to build your program from a file
+      called the makefile, which lists each of the non-source files and
+      how to compute it from other files. When you write a program, you
+      should write a makefile for it, so that it is possible to use Make
+      to build and install the program.
+    '';
+
+    platforms = platforms.all;
+    maintainers = [ maintainers.vrthra ];
+  };
+}
diff --git a/pkgs/development/tools/build-managers/gnumake/4.2/impure-dirs-head.patch b/pkgs/development/tools/build-managers/gnumake/4.2/impure-dirs-head.patch
new file mode 100644
index 000000000000..06d39e13ce39
--- /dev/null
+++ b/pkgs/development/tools/build-managers/gnumake/4.2/impure-dirs-head.patch
@@ -0,0 +1,31 @@
+diff -Naur a/src/read.c b/src/read.c
+--- a/src/read.c	2017-11-19 15:17:47.000000000 -0500
++++ b/src/read.c	2018-02-19 08:53:51.548755213 -0500
+@@ -109,10 +109,12 @@
+ #endif
+     INCLUDEDIR,
+ #ifndef _AMIGA
++#if 0
+     "/usr/gnu/include",
+     "/usr/local/include",
+     "/usr/include",
+ #endif
++#endif
+     0
+   };
+ 
+diff -Naur a/src/remake.c b/src/remake.c
+--- a/src/remake.c	2017-11-19 15:17:47.000000000 -0500
++++ b/src/remake.c	2018-02-19 08:54:08.304101943 -0500
+@@ -1601,9 +1601,11 @@
+   static const char *dirs[] =
+     {
+ #ifndef _AMIGA
++#if 0
+       "/lib",
+       "/usr/lib",
+ #endif
++#endif
+ #if defined(WINDOWS32) && !defined(LIBDIR)
+ /*
+  * This is completely up to the user at product install time. Just define
diff --git a/pkgs/development/tools/build-managers/icmake/default.nix b/pkgs/development/tools/build-managers/icmake/default.nix
index 2744dac2500b..5b455f267d82 100644
--- a/pkgs/development/tools/build-managers/icmake/default.nix
+++ b/pkgs/development/tools/build-managers/icmake/default.nix
@@ -2,10 +2,10 @@
 
 stdenv.mkDerivation rec {
   name = "icmake-${version}";
-  version = "9.02.04";
+  version = "9.02.06";
 
   src = fetchFromGitHub {
-    sha256 = "0dkqdm7nc3l9kgwkkf545hfbxj7ibkxl7n49wz9m1rcq9pvpmrw3";
+    sha256 = "1hs7fhqpkhlrjvjhfarf5bmxl8dw3r0immzdib27gwh3sfzgpx0b";
     rev = version;
     repo = "icmake";
     owner = "fbb-git";
diff --git a/pkgs/development/tools/buildah/default.nix b/pkgs/development/tools/buildah/default.nix
new file mode 100644
index 000000000000..5fdbd7766cf8
--- /dev/null
+++ b/pkgs/development/tools/buildah/default.nix
@@ -0,0 +1,49 @@
+{ stdenv, lib, buildGoPackage, fetchFromGitHub, runCommand
+, gpgme, libgpgerror, devicemapper, btrfs-progs, pkgconfig, ostree, libselinux
+, go-md2man }:
+
+let
+  version = "0.11";
+
+  src = fetchFromGitHub {
+    rev = "v${version}";
+    owner = "projectatomic";
+    repo = "buildah";
+    sha256 = "0rq3dw6p9rcqc99jk93j0qwg1p8fh4pwqvzylcqlcyqhv46426zf";
+  };
+  goPackagePath = "github.com/projectatomic/buildah";
+
+in buildGoPackage rec {
+  name = "buildah-${version}";
+  inherit src;
+
+  outputs = [ "bin" "man" "out" ];
+
+  inherit goPackagePath;
+  excludedPackages = [ "tests" ];
+
+  nativeBuildInputs = [ pkgconfig go-md2man.bin ];
+  buildInputs = [ gpgme libgpgerror devicemapper btrfs-progs ostree libselinux ];
+
+  # Copied from the skopeo package, doesn’t seem to make a difference?
+  # If something related to these libs failed, uncomment these lines.
+  /*preBuild = with lib; ''
+    export CGO_CFLAGS="-I${getDev gpgme}/include -I${getDev libgpgerror}/include -I${getDev devicemapper}/include -I${getDev btrfs-progs}/include"
+    export CGO_LDFLAGS="-L${getLib gpgme}/lib -L${getLib libgpgerror}/lib -L${getLib devicemapper}/lib"
+  '';*/
+
+  postBuild = ''
+    # depends on buildGoPackage not changing …
+    pushd ./go/src/${goPackagePath}/docs
+    make docs
+    make install PREFIX="$man"
+    popd
+  '';
+
+  meta = {
+    description = "A tool which facilitates building OCI images";
+    homepage = https://github.com/projectatomic/buildah;
+    maintainers = with stdenv.lib.maintainers; [ Profpatsch ];
+    license = stdenv.lib.licenses.asl20;
+  };
+}
diff --git a/pkgs/development/tools/compile-daemon/default.nix b/pkgs/development/tools/compile-daemon/default.nix
index bad35e2422b5..db7df2af7009 100644
--- a/pkgs/development/tools/compile-daemon/default.nix
+++ b/pkgs/development/tools/compile-daemon/default.nix
@@ -19,7 +19,7 @@ buildGoPackage rec {
   meta = with stdenv.lib; {
     description = "Very simple compile daemon for Go";
     license = licenses.bsd2;
-    maintainers = with maintainers; [ profpatsch ];
+    maintainers = with maintainers; [ ];
     inherit (src.meta) homepage;
   };
 }
diff --git a/pkgs/development/tools/continuous-integration/buildkite-agent/default.nix b/pkgs/development/tools/continuous-integration/buildkite-agent/default.nix
index ab090e6dc129..515e22788e50 100644
--- a/pkgs/development/tools/continuous-integration/buildkite-agent/default.nix
+++ b/pkgs/development/tools/continuous-integration/buildkite-agent/default.nix
@@ -1,6 +1,6 @@
 { stdenv, buildGoPackage, fetchFromGitHub, makeWrapper, coreutils, git, openssh, bash, gnused, gnugrep }:
 let
-  version = "2.6.6";
+  version = "2.6.9";
   goPackagePath = "github.com/buildkite/agent";
 in
 buildGoPackage {
@@ -12,11 +12,15 @@ buildGoPackage {
     owner = "buildkite";
     repo = "agent";
     rev = "v${version}";
-    sha256 = "0rpi63mfzlm39517l4xjcka3m4dnfjzwvpi0i1rpf1z2288cnkyx";
+    sha256 = "0rlinj7dcr8vzl1pb15nfny8jkvvj50i8czf4ahv26avnfycm4pz";
   };
 
   nativeBuildInputs = [ makeWrapper ];
 
+  # on Linux, the TMPDIR is /build which is the same prefix as this package
+  # remove once #35068 is merged
+  noAuditTmpdir = stdenv.isLinux;
+
   postInstall = ''
     # Install bootstrap.sh
     mkdir -p $bin/libexec/buildkite-agent
@@ -44,6 +48,6 @@ buildGoPackage {
     homepage = https://buildkite.com/docs/agent;
     license = licenses.mit;
     maintainers = with maintainers; [ pawelpacana zimbatm ];
-    platforms = platforms.linux ++ platforms.darwin;
+    platforms = platforms.unix;
   };
 }
diff --git a/pkgs/development/tools/continuous-integration/jenkins/default.nix b/pkgs/development/tools/continuous-integration/jenkins/default.nix
index 642a6a97bc0b..18ca5d4d8972 100644
--- a/pkgs/development/tools/continuous-integration/jenkins/default.nix
+++ b/pkgs/development/tools/continuous-integration/jenkins/default.nix
@@ -2,11 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "jenkins-${version}";
-  version = "2.103";
+  version = "2.89.3";
 
   src = fetchurl {
-    url = "http://mirrors.jenkins-ci.org/war/${version}/jenkins.war";
-    sha256 = "1d771q4xjjji7ydh6xjz3j6hz2mszxh0m3zqjh4khlzqhnvydlha";
+    url = "http://mirrors.jenkins.io/war-stable/${version}/jenkins.war";
+    sha256 = "0flqd3r1nip9wc8sy0kiqjivgx0zkpzlkbz6n3gb1plc73lpdwbr";
   };
 
   buildCommand = ''
diff --git a/pkgs/development/tools/database/liquibase/default.nix b/pkgs/development/tools/database/liquibase/default.nix
index 11932965af49..a7b9976be43c 100644
--- a/pkgs/development/tools/database/liquibase/default.nix
+++ b/pkgs/development/tools/database/liquibase/default.nix
@@ -65,7 +65,7 @@ stdenv.mkDerivation rec {
     description = "Version Control for your database";
     homepage = http://www.liquibase.org/;
     license = licenses.asl20;
-    maintainers = with maintainers; [ nequissimus profpatsch ];
+    maintainers = with maintainers; [ nequissimus ];
     platforms = with platforms; unix;
   };
 }
diff --git a/pkgs/development/tools/dep/default.nix b/pkgs/development/tools/dep/default.nix
index 477c874af011..0d4f72fad80a 100644
--- a/pkgs/development/tools/dep/default.nix
+++ b/pkgs/development/tools/dep/default.nix
@@ -21,7 +21,7 @@ buildGoPackage rec {
     homepage = https://github.com/golang/dep;
     description = "Go dependency management tool";
     license = licenses.bsd3;
-    platforms = platforms.linux;
+    platforms = platforms.all;
     maintainers = [ maintainers.carlsverre ];
   };
 }
diff --git a/pkgs/development/tools/devpi-client/default.nix b/pkgs/development/tools/devpi-client/default.nix
index 6a98befd346e..905314efe5a9 100644
--- a/pkgs/development/tools/devpi-client/default.nix
+++ b/pkgs/development/tools/devpi-client/default.nix
@@ -29,8 +29,9 @@ pythonPackages.buildPythonApplication rec {
     # setuptools do not get propagated into the tox call (cannot import setuptools)
     rm testing/test_test.py
 
-    # test tries to connect to upstream pypi
-    py.test -k 'not test_pypi_index_attributes' testing
+    # test_pypi_index_attributes tries to connect to upstream pypi
+    # test_download_release_error is fixed in the next release
+    py.test -k 'not test_pypi_index_attributes and not test_download_release_error' testing
   '';
 
   LC_ALL = "en_US.UTF-8";
diff --git a/pkgs/development/tools/devpi-server/default.nix b/pkgs/development/tools/devpi-server/default.nix
index 275e411fc8d7..6823ae3372cb 100644
--- a/pkgs/development/tools/devpi-server/default.nix
+++ b/pkgs/development/tools/devpi-server/default.nix
@@ -3,17 +3,24 @@
 pythonPackages.buildPythonApplication rec {
   name = "${pname}-${version}";
   pname = "devpi-server";
-  version = "4.3.1";
+  version = "4.4.0";
 
   src = pythonPackages.fetchPypi {
     inherit pname version;
-    sha256 = "0x6ks2sbpknznxaqlh0gf5hcvhkmgixixq2zs91wgfqxk4vi4s6n";
+    sha256 = "0y77kcnk26pfid8vsw07v2k61x9sdl6wbmxg5qxnz3vd7703xpkl";
   };
 
   propagatedBuildInputs = with pythonPackages;
     [ devpi-common execnet itsdangerous pluggy waitress pyramid passlib ];
-  checkInputs = with pythonPackages; [ nginx webtest pytest beautifulsoup4 pytest-timeout pytest-catchlog mock pyyaml ];
+  checkInputs = with pythonPackages; [ nginx webtest pytest beautifulsoup4 pytest-timeout mock pyyaml ];
+  preCheck = ''
+    # These tests pass with pytest 3.3.2 but not with pytest 3.4.0.
+    sed -i 's/test_basic/noop/' test_devpi_server/test_log.py
+    sed -i 's/test_new/noop/' test_devpi_server/test_log.py
+    sed -i 's/test_thread_run_try_again/noop/' test_devpi_server/test_replica.py
+  '';
   checkPhase = ''
+    runHook preCheck
     cd test_devpi_server/
     PATH=$PATH:$out/bin pytest --slow -rfsxX
   '';
diff --git a/pkgs/development/tools/dtools/default.nix b/pkgs/development/tools/dtools/default.nix
index daa25de95080..d76bbb7f53a3 100644
--- a/pkgs/development/tools/dtools/default.nix
+++ b/pkgs/development/tools/dtools/default.nix
@@ -2,14 +2,14 @@
 
 stdenv.mkDerivation rec {
   name = "dtools-${version}";
-  version = "2.078.1";
+  version = "2.078.2";
 
   srcs = [
     (fetchFromGitHub {
       owner = "dlang";
       repo = "dmd";
       rev = "v${version}";
-      sha256 = "0b9lphh4g3r9cyzv4wcfppv9j3w952vvwv615za23acgwav3mqg2";
+      sha256 = "0x9q4aw4jl36dz7m5111y2sm8jdaj3zg36zhj6vqg1lqpdn3bhls";
       name = "dmd";
     })
     (fetchFromGitHub {
@@ -28,23 +28,11 @@ stdenv.mkDerivation rec {
       cd dtools
   '';
 
-  postPatch = ''
-      substituteInPlace posix.mak \
-          --replace "../dmd/generated/\$(OS)/release/\$(MODEL)/dmd" ${dmd.out}/bin/dmd
-
-      substituteInPlace posix.mak \
-          --replace gcc $CC
-
-      # To fix rdmd test with newer phobos
-      substituteInPlace rdmd.d \
-          --replace " std.stdiobase," ""
-  '';
-
   nativeBuildInputs = [ dmd ];
   buildInputs = [ curl ];
 
   makeCmd = ''
-    make -f posix.mak DMD=${dmd.out}/bin/dmd DMD_DIR=dmd
+    make -f posix.mak DMD_DIR=dmd DMD=${dmd.out}/bin/dmd CC=${stdenv.cc}/bin/cc
   '';
 
   buildPhase = ''
diff --git a/pkgs/development/tools/flock/default.nix b/pkgs/development/tools/flock/default.nix
new file mode 100644
index 000000000000..ac145fae7efe
--- /dev/null
+++ b/pkgs/development/tools/flock/default.nix
@@ -0,0 +1,24 @@
+{ stdenv, lib, fetchFromGitHub, autoreconfHook, ronn }:
+
+stdenv.mkDerivation rec {
+  pname = "flock";
+  name = "${pname}-${version}";
+  version = "0.2.3";
+
+  src = fetchFromGitHub {
+    owner = "discoteq";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "1vdq22zhdfi7wwndsd6s7fwmz02fsn0x04d7asq4hslk7bjxjjzn";
+  };
+
+  nativeBuildInputs = [ autoreconfHook ];
+  buildInputs = [ ronn ];
+
+  meta = with lib; {
+    description = "Cross-platform version of flock(1)";
+    maintainers = [ maintainers.matthewbauer ];
+    platforms = platforms.all;
+    license = licenses.isc;
+  };
+}
diff --git a/pkgs/development/tools/gnome-desktop-testing/default.nix b/pkgs/development/tools/gnome-desktop-testing/default.nix
new file mode 100644
index 000000000000..ff03897edb29
--- /dev/null
+++ b/pkgs/development/tools/gnome-desktop-testing/default.nix
@@ -0,0 +1,26 @@
+{ stdenv, glib, autoreconfHook, pkgconfig, libgsystem, fetchgit }:
+
+stdenv.mkDerivation rec {
+  version = "2016.1";
+  name = "gnome-desktop-testing-${version}";
+
+  src = fetchgit {
+    url = https://git.gnome.org/browse/gnome-desktop-testing;
+    rev = "v${version}";
+    sha256 = "18qhmsab6jc01qrfzjx8m4799gbs72c4jg830mp0p865rcbl68dc";
+  };
+
+  nativeBuildInputs = [ autoreconfHook pkgconfig ];
+
+  buildInputs = [ glib libgsystem ];
+
+  enableParallelBuilding = true;
+
+  meta = with stdenv.lib; {
+    description = "GNOME OSTree testing code";
+    homepage = https://live.gnome.org/Initiatives/GnomeGoals/InstalledTests;
+    license = licenses.lgpl21;
+    platforms = platforms.linux;
+    maintainers = [ maintainers.jtojnar ];
+  };
+}
diff --git a/pkgs/development/tools/go-outline/default.nix b/pkgs/development/tools/go-outline/default.nix
new file mode 100644
index 000000000000..fe159c85c3d6
--- /dev/null
+++ b/pkgs/development/tools/go-outline/default.nix
@@ -0,0 +1,24 @@
+{ stdenv, lib, buildGoPackage, fetchFromGitHub }:
+
+buildGoPackage rec {
+  name = "go-outline-${version}";
+  version = "unstable-2017-08-04";
+  rev = "9e9d089bb61a5ce4f8e0c8d8dc5b4e41b0e02a48";
+
+  goPackagePath = "github.com/ramya-rao-a/go-outline";
+  goDeps = ./deps.nix;
+
+  src = fetchFromGitHub {
+    inherit rev;
+    owner = "ramya-rao-a";
+    repo = "go-outline";
+    sha256 = "0kbkv4d6q9w0d41m00sqdm10l0sg56mv8y6rmidqs152mm2w13x0";
+  };
+
+  meta = {
+    description = "Utility to extract JSON representation of declarations from a Go source file.";
+    homepage = https://github.com/ramya-rao-a/go-outline;
+    maintainers = with stdenv.lib.maintainers; [ vdemeester ];
+    license = stdenv.lib.licenses.mit;
+  };
+}
diff --git a/pkgs/development/tools/go-outline/deps.nix b/pkgs/development/tools/go-outline/deps.nix
new file mode 100644
index 000000000000..6a333b58bec6
--- /dev/null
+++ b/pkgs/development/tools/go-outline/deps.nix
@@ -0,0 +1,11 @@
+[
+  {
+    goPackagePath = "golang.org/x/tools";
+    fetch = {
+      type = "git";
+      url = "https://github.com/golang/tools";
+      rev = "96b5a5404f303f074e6117d832a9873c439508f0";
+      sha256 = "1h6r9xyp1v3w2x8d108vzghn65l6ia2h895irypmrwymfcp30y42";
+    };
+  }
+]
diff --git a/pkgs/development/tools/go-symbols/default.nix b/pkgs/development/tools/go-symbols/default.nix
new file mode 100644
index 000000000000..9a8b592b038d
--- /dev/null
+++ b/pkgs/development/tools/go-symbols/default.nix
@@ -0,0 +1,23 @@
+{ stdenv, lib, buildGoPackage, fetchgit }:
+
+buildGoPackage rec {
+  name = "go-symbols-${version}";
+  version = "unstable-2017-02-06";
+  rev = "5a7f75904fb552189036c640d04cd6afef664836";
+
+  goPackagePath = "github.com/acroca/go-symbols";
+  goDeps = ./deps.nix;
+
+  src = fetchgit {
+    inherit rev;
+    url = "https://github.com/acroca/go-symbols";
+    sha256 = "0qh2jjhwwk48gi8yii0z031bah11anxfz81nwflsiww7n426a8bb";
+  };
+
+  meta = {
+    description = "A utility for extracting a JSON representation of the package symbols from a go source tree.";
+    homepage = https://github.com/acroca/go-symbols;
+    maintainers = with stdenv.lib.maintainers; [ vdemeester ];
+    license = stdenv.lib.licenses.mit;
+  };
+}
diff --git a/pkgs/development/tools/go-symbols/deps.nix b/pkgs/development/tools/go-symbols/deps.nix
new file mode 100644
index 000000000000..6a333b58bec6
--- /dev/null
+++ b/pkgs/development/tools/go-symbols/deps.nix
@@ -0,0 +1,11 @@
+[
+  {
+    goPackagePath = "golang.org/x/tools";
+    fetch = {
+      type = "git";
+      url = "https://github.com/golang/tools";
+      rev = "96b5a5404f303f074e6117d832a9873c439508f0";
+      sha256 = "1h6r9xyp1v3w2x8d108vzghn65l6ia2h895irypmrwymfcp30y42";
+    };
+  }
+]
diff --git a/pkgs/development/tools/gomodifytags/default.nix b/pkgs/development/tools/gomodifytags/default.nix
new file mode 100644
index 000000000000..f1452bc12114
--- /dev/null
+++ b/pkgs/development/tools/gomodifytags/default.nix
@@ -0,0 +1,22 @@
+{ stdenv, lib, buildGoPackage, fetchgit }:
+
+buildGoPackage rec {
+  name = "gomodifytags-${version}";
+  version = "unstable-2017-12-14";
+  rev = "20644152db4fe0ac406d81f3848e8a15f0cdeefa";
+
+  goPackagePath = "github.com/fatih/gomodifytags";
+
+  src = fetchgit {
+    inherit rev;
+    url = "https://github.com/fatih/gomodifytags";
+    sha256 = "0k0ly3mmm9zcaxwlzdbvdxr2gn7kvcqzk1bb7blgq7fkkzpp7i1q";
+  };
+
+  meta = {
+    description = "Go tool to modify struct field tags.";
+    homepage = https://github.com/fatih/gomodifytags;
+    maintainers = with stdenv.lib.maintainers; [ vdemeester ];
+    license = stdenv.lib.licenses.bsd3;
+  };
+}
diff --git a/pkgs/development/tools/gopkgs/default.nix b/pkgs/development/tools/gopkgs/default.nix
new file mode 100644
index 000000000000..298657fe38c5
--- /dev/null
+++ b/pkgs/development/tools/gopkgs/default.nix
@@ -0,0 +1,24 @@
+{ stdenv, lib, buildGoPackage, fetchFromGitHub }:
+
+buildGoPackage rec {
+  name = "gopkgs-${version}";
+  version = "unstable-2017-12-29";
+  rev = "b2ea2ecd37740e6ce0e020317d90c729aab4dc6d";
+
+  goPackagePath = "github.com/uudashr/gopkgs";
+  goDeps = ./deps.nix;
+
+  src = fetchFromGitHub {
+    inherit rev;
+    owner = "uudashr";
+    repo = "gopkgs";
+    sha256 = "1hwzxrf2h8xjbbx6l86mjpjh4csxxsy17zkh8h3qzncyfnsnczzg";
+  };
+
+  meta = {
+    description = "Tool to get list available Go packages.";
+    homepage = https://github.com/uudashr/gopkgs;
+    maintainers = with stdenv.lib.maintainers; [ vdemeester ];
+    license = stdenv.lib.licenses.mit;
+  };
+}
diff --git a/pkgs/development/tools/gopkgs/deps.nix b/pkgs/development/tools/gopkgs/deps.nix
new file mode 100644
index 000000000000..0f72ee3e5e0f
--- /dev/null
+++ b/pkgs/development/tools/gopkgs/deps.nix
@@ -0,0 +1,11 @@
+[
+  {
+    goPackagePath = "github.com/MichaelTJones/walk";
+    fetch = {
+      type = "git";
+      url = "https://github.com/MichaelTJones/walk";
+      rev = "4748e29d5718c2df4028a6543edf86fd8cc0f881";
+      sha256 = "03bc3cql3w8cx05xlnzxsff59c6679rcpx4njzk86k00blkkizv7";
+    };
+  }
+]
diff --git a/pkgs/development/tools/gotests/default.nix b/pkgs/development/tools/gotests/default.nix
new file mode 100644
index 000000000000..ccdab780e6cf
--- /dev/null
+++ b/pkgs/development/tools/gotests/default.nix
@@ -0,0 +1,25 @@
+{ stdenv, lib, buildGoPackage, fetchFromGitHub }:
+
+buildGoPackage rec {
+  name = "gotests-${version}";
+  version = "1.5.2";
+  rev = "v${version}";
+
+  goPackagePath = "github.com/cweill/gotests";
+  excludedPackages = "testdata";
+  goDeps = ./deps.nix;
+
+  src = fetchFromGitHub {
+    inherit rev;
+    owner = "cweill";
+    repo = "gotests";
+    sha256 = "0ff2jvpc1xb5jr6dv9izlpfavxaivzirqmdmicpznrqjz0d56pri";
+  };
+
+  meta = {
+    description = "Generate Go tests from your source code.";
+    homepage = https://github.com/cweill/gotests;
+    maintainers = with stdenv.lib.maintainers; [ vdemeester ];
+    license = stdenv.lib.licenses.asl20;
+  };
+}
diff --git a/pkgs/development/tools/gotests/deps.nix b/pkgs/development/tools/gotests/deps.nix
new file mode 100644
index 000000000000..6a333b58bec6
--- /dev/null
+++ b/pkgs/development/tools/gotests/deps.nix
@@ -0,0 +1,11 @@
+[
+  {
+    goPackagePath = "golang.org/x/tools";
+    fetch = {
+      type = "git";
+      url = "https://github.com/golang/tools";
+      rev = "96b5a5404f303f074e6117d832a9873c439508f0";
+      sha256 = "1h6r9xyp1v3w2x8d108vzghn65l6ia2h895irypmrwymfcp30y42";
+    };
+  }
+]
diff --git a/pkgs/development/tools/haskell/lambdabot/default.nix b/pkgs/development/tools/haskell/lambdabot/default.nix
index 7282fb4970ee..edf967f7d110 100644
--- a/pkgs/development/tools/haskell/lambdabot/default.nix
+++ b/pkgs/development/tools/haskell/lambdabot/default.nix
@@ -7,15 +7,13 @@
 , configuration ? "[]"
 }:
 
-# FIXME: fix hoogle search
-
 let allPkgs = pkgs: mueval.defaultPkgs pkgs ++ [ pkgs.lambdabot-trusted ] ++ packages pkgs;
     mueval' = mueval.override {
       inherit haskellPackages;
       packages = allPkgs;
     };
     bins = lib.makeBinPath ([ mueval'
-                              (haskellPackages.ghcWithPackages allPkgs)
+                              (haskellPackages.ghcWithHoogle allPkgs)
                               haskellPackages.unlambda
                               haskellPackages.brainfuck
                             ]
diff --git a/pkgs/development/tools/haskell/multi-ghc-travis/default.nix b/pkgs/development/tools/haskell/multi-ghc-travis/default.nix
index c21d5595708a..a259fd7d76ba 100644
--- a/pkgs/development/tools/haskell/multi-ghc-travis/default.nix
+++ b/pkgs/development/tools/haskell/multi-ghc-travis/default.nix
@@ -6,10 +6,10 @@ mkDerivation {
   pname = "make-travis-yml";
   version = "0";
   src = fetchFromGitHub {
-    owner = "hvr";
-    repo = "multi-ghc-travis";
-    rev = "0d1b4089f6829659149747c9551712d24fd0b124";
-    sha256 = "00dbg8hbncv74c2baskyhg4h0yv8wrz0fnkvw2bzcn0cjrz7xqwr";
+    owner = "haskell-CI";
+    repo = "haskell-ci";
+    rev = "36b2ee58b9fd160d606608832625b2b6c32aec43";
+    sha256 = "16g99jh5bszvfvb7mmyhl95mkf1l3ydyax8d9py91hi3m8r0c2x0";
   };
   isLibrary = true;
   isExecutable = true;
@@ -22,7 +22,7 @@ mkDerivation {
     base bytestring Diff directory filepath tasty tasty-golden
     transformers
   ];
-  homepage = "https://github.com/hvr/multi-ghc-travis";
+  homepage = "https://github.com/haskell-CI/haskell-ci";
   description = "Script generator for Travis-CI";
   license = stdenv.lib.licenses.bsd3;
 }
diff --git a/pkgs/development/tools/hcloud/default.nix b/pkgs/development/tools/hcloud/default.nix
new file mode 100644
index 000000000000..e56502a4ad05
--- /dev/null
+++ b/pkgs/development/tools/hcloud/default.nix
@@ -0,0 +1,24 @@
+{ stdenv, buildGoPackage, fetchFromGitHub }:
+
+buildGoPackage rec {
+  name = "hcloud-${version}";
+  version = "1.3.0";
+  goPackagePath = "github.com/hetznercloud/cli";
+
+  src = fetchFromGitHub {
+    owner = "hetznercloud";
+    repo = "cli";
+    rev = "v${version}";
+    sha256 = "1216qz1kk38vkvfrznjwb65vsbhscqvvrsbp2i6pnf0i85p00pqm";
+  };
+
+  buildFlagsArray = [ "-ldflags=" "-X github.com/hetznercloud/cli.Version=${version}" ];
+
+  meta = {
+    description = "A command-line interface for Hetzner Cloud, a provider for cloud virtual private servers";
+    homepage = https://github.com/hetznercloud/cli;
+    license = stdenv.lib.licenses.mit;
+    platforms = stdenv.lib.platforms.all;
+    maintainers = [ stdenv.lib.maintainers.zauberpony ];
+  };
+}
diff --git a/pkgs/development/tools/icestorm/default.nix b/pkgs/development/tools/icestorm/default.nix
index 8b3cd17a7b27..0307027faa2e 100644
--- a/pkgs/development/tools/icestorm/default.nix
+++ b/pkgs/development/tools/icestorm/default.nix
@@ -2,19 +2,24 @@
 
 stdenv.mkDerivation rec {
   name = "icestorm-${version}";
-  version = "2018.02.04";
+  version = "2018.02.14";
 
   src = fetchFromGitHub {
     owner  = "cliffordwolf";
     repo   = "icestorm";
-    rev    = "722790ad3cdb497e1b13cd1b4368d8380371eb37";
-    sha256 = "0l04c6dshhhdcgqg1bdlw215wbn52fsg2fm2cvavhvf64c18lwd1";
+    rev    = "edbf5fce90ff0e71922a54241a1aec914cc3e230";
+    sha256 = "01d6xv5c4x8w8lamc8n3vnqsyn7ykhh1ws7k96d6ij5fs52k94xb";
   };
 
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ python3 libftdi ];
-  preBuild = ''
-    makeFlags="PREFIX=$out $makeFlags"
+  makeFlags = [ "PREFIX=$(out)" ];
+
+  # fix icebox_vlog chipdb path. icestorm issue:
+  #   https://github.com/cliffordwolf/icestorm/issues/125
+  patchPhase = ''
+    substituteInPlace ./icebox/icebox_vlog.py \
+      --replace /usr/local/share "$out/share"
   '';
 
   meta = {
diff --git a/pkgs/development/tools/jid/default.nix b/pkgs/development/tools/jid/default.nix
deleted file mode 100644
index 9c52ac615514..000000000000
--- a/pkgs/development/tools/jid/default.nix
+++ /dev/null
@@ -1,25 +0,0 @@
-# This file was generated by go2nix.
-{ stdenv, buildGoPackage, fetchFromGitHub, fetchhg, fetchbzr, fetchsvn }:
-
-buildGoPackage rec {
-  name = "jid-${version}";
-  version = "0.7.1";
-  rev = "${version}";
-
-  goPackagePath = "github.com/simeji/jid";
-
-  src = fetchFromGitHub {
-    owner = "simeji";
-    repo = "jid";
-    inherit rev;
-    sha256 = "08snlqqch91w88zysfcavmqsafq93zzpkdjqkq1y7hx516fdaz1w";
-  };
-
-  goDeps = ./deps.nix;
-
-  meta = with stdenv.lib; {
-    description = "Incremental JSON digger";
-    license = licenses.mit;
-    maintainers = [ maintainers.profpatsch ];
-  };
-}
diff --git a/pkgs/development/tools/jid/deps.nix b/pkgs/development/tools/jid/deps.nix
deleted file mode 100644
index c3ec502b2a99..000000000000
--- a/pkgs/development/tools/jid/deps.nix
+++ /dev/null
@@ -1,75 +0,0 @@
-# This file was generated by go2nix.
-[
-  {
-    goPackagePath = "github.com/bitly/go-simplejson";
-    fetch = {
-      type = "git";
-      url = "https://github.com/bitly/go-simplejson";
-      rev = "aabad6e819789e569bd6aabf444c935aa9ba1e44";
-      sha256 = "0n9f9dz1jn1jx86d48569nznpjn9fmq3knn7r65xpy7jhih284jj";
-    };
-  }
-  {
-    goPackagePath = "github.com/fatih/color";
-    fetch = {
-      type = "git";
-      url = "https://github.com/fatih/color";
-      rev = "e8e01ee22a7d4a91b49646e39245fe08e69c7878";
-      sha256 = "1660g29qhshk6zxhpnc0f52m69jdqqdw2ccbkqw9y4kilnripfvl";
-    };
-  }
-  {
-    goPackagePath = "github.com/mattn/go-colorable";
-    fetch = {
-      type = "git";
-      url = "https://github.com/mattn/go-colorable";
-      rev = "d228849504861217f796da67fae4f6e347643f15";
-      sha256 = "0ch5sfcpmqczsh8kjbwpzdw31lacbkfyzvpzh4disnhhydbxjq0d";
-    };
-  }
-  {
-    goPackagePath = "github.com/mattn/go-isatty";
-    fetch = {
-      type = "git";
-      url = "https://github.com/mattn/go-isatty";
-      rev = "30a891c33c7cde7b02a981314b4228ec99380cca";
-      sha256 = "03gsxn89pgkj4jkxm9avnj4f0ckvcskc6fj2lcd98l3akrz50ndg";
-    };
-  }
-  {
-    goPackagePath = "github.com/mattn/go-runewidth";
-    fetch = {
-      type = "git";
-      url = "https://github.com/mattn/go-runewidth";
-      rev = "737072b4e32b7a5018b4a7125da8d12de90e8045";
-      sha256 = "09ni8bmj6p2b774bdh6mfcxl03bh5sqk860z03xpb6hv6yfxqkjm";
-    };
-  }
-  {
-    goPackagePath = "github.com/nsf/termbox-go";
-    fetch = {
-      type = "git";
-      url = "https://github.com/nsf/termbox-go";
-      rev = "abe82ce5fb7a42fbd6784a5ceb71aff977e09ed8";
-      sha256 = "156i8apkga8b3272kjhapyqwspgcfkrr9kpqwc5lii43k4swghpv";
-    };
-  }
-  {
-    goPackagePath = "github.com/nwidger/jsoncolor";
-    fetch = {
-      type = "git";
-      url = "https://github.com/nwidger/jsoncolor";
-      rev = "0192e84d44af834c3a90c8a17bf670483b91ad5a";
-      sha256 = "17mndgd1d233c22bd19xv4v2l2i5k8kz7y6n4n54a9i7fi9d10al";
-    };
-  }
-  {
-    goPackagePath = "github.com/pkg/errors";
-    fetch = {
-      type = "git";
-      url = "https://github.com/pkg/errors";
-      rev = "248dadf4e9068a0b3e79f02ed0a610d935de5302";
-      sha256 = "03l80r0i9bxl0vz363w62k4a8apzglgbrz6viwym3044sxkl1qks";
-    };
-  }
-]
diff --git a/pkgs/development/tools/librarian-puppet-go/default.nix b/pkgs/development/tools/librarian-puppet-go/default.nix
new file mode 100644
index 000000000000..1e2a421a6702
--- /dev/null
+++ b/pkgs/development/tools/librarian-puppet-go/default.nix
@@ -0,0 +1,25 @@
+{ stdenv, lib, fetchFromGitHub, buildGoPackage }:
+
+buildGoPackage rec {
+  name = "librarian-puppet-go-${version}";
+  version = "0.3.9";
+
+  goPackagePath = "github.com/tmtk75/librarian-puppet-go";
+
+  src = fetchFromGitHub {
+    owner = "tmtk75";
+    repo = "librarian-puppet-go";
+    rev = "v${version}";
+    sha256 = "19x2hz3b8xkhy2nkyjg6s4qvs55mh84fvjwp157a86dmxwkdf45y";
+  };
+
+  goDeps = ./deps.nix;
+
+  meta = with lib; {
+    inherit (src.meta) homepage;
+    description = "librarian-puppet implementation in go.";
+    license = licenses.unfree; # still unspecified https://github.com/tmtk75/librarian-puppet-go/issues/5
+    maintainers = with maintainers; [ womfoo ];
+    platforms = [ "x86_64-linux" ];
+  };
+}
diff --git a/pkgs/development/tools/librarian-puppet-go/deps.nix b/pkgs/development/tools/librarian-puppet-go/deps.nix
new file mode 100644
index 000000000000..e5729707d8ab
--- /dev/null
+++ b/pkgs/development/tools/librarian-puppet-go/deps.nix
@@ -0,0 +1,12 @@
+# This file was generated by https://github.com/kamilchm/go2nix v1.2.1
+[
+  {
+    goPackagePath = "github.com/jawher/mow.cli";
+    fetch = {
+      type = "git";
+      url = "https://github.com/jawher/mow.cli";
+      rev = "3ff64ca21987cfa628bd8d1865162b7ccd6107d7";
+      sha256 = "0vws79q4x3c9kjdsin3vw5200sinkxag3bfa0n9k69svsb222bij";
+    };
+  }
+]
diff --git a/pkgs/development/tools/misc/autoconf-archive/default.nix b/pkgs/development/tools/misc/autoconf-archive/default.nix
index 1b19a1caff67..0225a3f81416 100644
--- a/pkgs/development/tools/misc/autoconf-archive/default.nix
+++ b/pkgs/development/tools/misc/autoconf-archive/default.nix
@@ -2,11 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "autoconf-archive-${version}";
-  version = "2017.03.21";
+  version = "2017.09.28";
 
   src = fetchurl {
     url = "mirror://gnu/autoconf-archive/autoconf-archive-${version}.tar.xz";
-    sha256 = "0rfpapadka2023qhy8294ca5awxpb8d4904js6kv7piby5ax8siq";
+    sha256 = "00gsh9hkrgg291my98plkrwlcpxkfrpq64pglf18kciqbf2bb7sw";
   };
 
   buildInputs = [ xz ];
diff --git a/pkgs/development/tools/misc/autoconf/default.nix b/pkgs/development/tools/misc/autoconf/default.nix
index 472f437978bf..579dea33df47 100644
--- a/pkgs/development/tools/misc/autoconf/default.nix
+++ b/pkgs/development/tools/misc/autoconf/default.nix
@@ -8,7 +8,8 @@ stdenv.mkDerivation rec {
     sha256 = "113nlmidxy9kjr45kg9x3ngar4951mvag1js2a3j8nxcz34wxsv4";
   };
 
-  buildInputs = [ m4 perl ];
+  nativeBuildInputs = [ m4 perl ];
+  buildInputs = [ m4 ];
 
   # Work around a known issue in Cygwin.  See
   # http://thread.gmane.org/gmane.comp.sysutils.autoconf.bugs/6822 for
diff --git a/pkgs/development/tools/misc/autogen/default.nix b/pkgs/development/tools/misc/autogen/default.nix
index 28034f9d5492..77944297a972 100644
--- a/pkgs/development/tools/misc/autogen/default.nix
+++ b/pkgs/development/tools/misc/autogen/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, which, pkgconfig, perl, guile, libxml2 }:
+{ stdenv, buildPackages, fetchurl, which, pkgconfig, texinfo, perl, guile, libxml2 }:
 
 stdenv.mkDerivation rec {
   name = "autogen-${version}";
@@ -11,8 +11,21 @@ stdenv.mkDerivation rec {
 
   outputs = [ "bin" "dev" "lib" "out" "man" "info" ];
 
-  nativeBuildInputs = [ which pkgconfig perl ];
-  buildInputs = [ guile libxml2 ];
+  nativeBuildInputs = [ which pkgconfig perl ]
+    # autogen needs a build autogen when cross-compiling
+    ++ stdenv.lib.optionals (stdenv.hostPlatform != stdenv.buildPlatform) [
+      buildPackages.autogen buildPackages.texinfo ];
+  buildInputs = [
+    guile libxml2
+  ];
+
+  configureFlags = stdenv.lib.optionals (stdenv.hostPlatform != stdenv.buildPlatform) [
+    "--with-libxml2=${libxml2.dev}"
+    "--with-libxml2-cflags=-I${libxml2.dev}/include/libxml2"
+    # the configure check for regcomp wants to run a host program
+    "libopts_cv_with_libregex=yes"
+    #"MAKEINFO=${buildPackages.texinfo}/bin/makeinfo"
+  ];
 
   postPatch = ''
     # Fix a broken sed expression used for detecting the minor
diff --git a/pkgs/development/tools/misc/binutils/2.30.nix b/pkgs/development/tools/misc/binutils/2.30.nix
new file mode 100644
index 000000000000..830c07330524
--- /dev/null
+++ b/pkgs/development/tools/misc/binutils/2.30.nix
@@ -0,0 +1,131 @@
+{ stdenv, buildPackages
+, fetchurl, zlib
+, buildPlatform, hostPlatform, targetPlatform
+, noSysDirs, gold ? true, bison ? null
+}:
+
+let
+  version = "2.30";
+  basename = "binutils-${version}";
+  inherit (stdenv.lib) optional optionals optionalString;
+  # The targetPrefix prepended to binary names to allow multiple binuntils on the
+  # PATH to both be usable.
+  targetPrefix = optionalString (targetPlatform != hostPlatform) "${targetPlatform.config}-";
+in
+
+stdenv.mkDerivation rec {
+  name = targetPrefix + basename;
+
+  src = fetchurl {
+    url = "mirror://gnu/binutils/${basename}.tar.bz2";
+    sha256 = "028cklfqaab24glva1ks2aqa1zxa6w6xmc8q34zs1sb7h22dxspg";
+  };
+
+  patches = [
+    # Turn on --enable-new-dtags by default to make the linker set
+    # RUNPATH instead of RPATH on binaries.  This is important because
+    # RUNPATH can be overriden using LD_LIBRARY_PATH at runtime.
+    ./new-dtags.patch
+
+    # Since binutils 2.22, DT_NEEDED flags aren't copied for dynamic outputs.
+    # That requires upstream changes for things to work. So we can patch it to
+    # get the old behaviour by now.
+    ./dtneeded.patch
+
+    # Make binutils output deterministic by default.
+    ./deterministic.patch
+
+    # Always add PaX flags section to ELF files.
+    # This is needed, for instance, so that running "ldd" on a binary that is
+    # PaX-marked to disable mprotect doesn't fail with permission denied.
+    ./pt-pax-flags.patch
+
+    # Bfd looks in BINDIR/../lib for some plugins that don't
+    # exist. This is pointless (since users can't install plugins
+    # there) and causes a cycle between the lib and bin outputs, so
+    # get rid of it.
+    ./no-plugins.patch
+
+    # Help bfd choose between elf32-littlearm, elf32-littlearm-symbian, and
+    # elf32-littlearm-vxworks in favor of the first.
+    # https://github.com/NixOS/nixpkgs/pull/30484#issuecomment-345472766
+    ./disambiguate-arm-targets.patch
+
+    # For some reason bfd ld doesn't search DT_RPATH when cross-compiling. It's
+    # not clear why this behavior was decided upon but it has the unfortunate
+    # consequence that the linker will fail to find transitive dependencies of
+    # shared objects when cross-compiling. Consequently, we are forced to
+    # override this behavior, forcing ld to search DT_RPATH even when
+    # cross-compiling.
+    ./always-search-rpath.patch
+  ];
+
+  outputs = [ "out" "info" "man" ];
+
+  depsBuildBuild = [ buildPackages.stdenv.cc ];
+  nativeBuildInputs = [ bison ];
+  buildInputs = [ zlib ];
+
+  inherit noSysDirs;
+
+  preConfigure = ''
+    # Clear the default library search path.
+    if test "$noSysDirs" = "1"; then
+        echo 'NATIVE_LIB_DIRS=' >> ld/configure.tgt
+    fi
+
+    # Use symlinks instead of hard links to save space ("strip" in the
+    # fixup phase strips each hard link separately).
+    for i in binutils/Makefile.in gas/Makefile.in ld/Makefile.in gold/Makefile.in; do
+        sed -i "$i" -e 's|ln |ln -s |'
+    done
+  '';
+
+  # As binutils takes part in the stdenv building, we don't want references
+  # to the bootstrap-tools libgcc (as uses to happen on arm/mips)
+  NIX_CFLAGS_COMPILE = if hostPlatform.isDarwin
+    then "-Wno-string-plus-int -Wno-deprecated-declarations"
+    else "-static-libgcc";
+
+  # TODO(@Ericson2314): Always pass "--target" and always targetPrefix.
+  configurePlatforms =
+    # TODO(@Ericson2314): Figure out what's going wrong with Arm
+    if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isArm
+    then []
+    else [ "build" "host" ] ++ stdenv.lib.optional (targetPlatform != hostPlatform) "target";
+
+  configureFlags = [
+    "--enable-targets=all" "--enable-64-bit-bfd"
+    "--disable-install-libbfd"
+    "--disable-shared" "--enable-static"
+    "--with-system-zlib"
+
+    "--enable-deterministic-archives"
+    "--disable-werror"
+    "--enable-fix-loongson2f-nop"
+  ] ++ optionals gold [ "--enable-gold" "--enable-plugins" ];
+
+  enableParallelBuilding = true;
+
+  passthru = {
+    inherit targetPrefix version;
+  };
+
+  meta = with stdenv.lib; {
+    description = "Tools for manipulating binaries (linker, assembler, etc.)";
+    longDescription = ''
+      The GNU Binutils are a collection of binary tools.  The main
+      ones are `ld' (the GNU linker) and `as' (the GNU assembler).
+      They also include the BFD (Binary File Descriptor) library,
+      `gprof', `nm', `strip', etc.
+    '';
+    homepage = http://www.gnu.org/software/binutils/;
+    license = licenses.gpl3Plus;
+    maintainers = with maintainers; [ ericson2314 ];
+    platforms = platforms.unix;
+
+    /* Give binutils a lower priority than gcc-wrapper to prevent a
+       collision due to the ld/as wrappers/symlinks in the latter. */
+    priority = 10;
+  };
+}
diff --git a/pkgs/development/tools/misc/bossa/default.nix b/pkgs/development/tools/misc/bossa/default.nix
index 8035388c5f06..bb81a461188a 100644
--- a/pkgs/development/tools/misc/bossa/default.nix
+++ b/pkgs/development/tools/misc/bossa/default.nix
@@ -14,12 +14,12 @@ let
 
 in
 stdenv.mkDerivation rec {
-  name = "bossa-2014-08-18";
+  name = "bossa-1.8";
 
   src = fetchgit {
     url = https://github.com/shumatech/BOSSA;
-    rev = "0f0a41cb1c3a65e909c5c744d8ae664e896a08ac"; /* arduino branch */
-    sha256 = "0xg79kli1ypw9zyl90mm6vfk909jinmk3lnl8sim6v2yn8shs9cn";
+    rev = "3be622ca0aa6214a2fc51c1ec682c4a58a423d62";
+    sha256 = "19ik86qbffcb04cgmi4mnascbkck4ynfj87ha65qdk6fmp5q35vm";
   };
 
   patches = [ ./bossa-no-applet-build.patch ];
diff --git a/pkgs/development/tools/misc/fswatch/default.nix b/pkgs/development/tools/misc/fswatch/default.nix
index cdddad5155ff..2b26383ed310 100644
--- a/pkgs/development/tools/misc/fswatch/default.nix
+++ b/pkgs/development/tools/misc/fswatch/default.nix
@@ -10,13 +10,13 @@
 
 stdenv.mkDerivation rec {
   name = "fswatch-${version}";
-  version = "1.9.3";
+  version = "1.11.2";
 
   src = fetchFromGitHub {
     owner = "emcrisostomo";
     repo = "fswatch";
     rev = version;
-    sha256 = "1g329aapdvbzhr39wyh295shpfq5f0nlzsqkjnr8l6zzak7f4yrg";
+    sha256 = "05vgpd1fx9fy3vnnmq5gz236avgva82axix127xy98gaxrac52vq";
   };
 
   nativeBuildInputs = [ autoreconfHook ];
diff --git a/pkgs/development/tools/misc/lsof/default.nix b/pkgs/development/tools/misc/lsof/default.nix
index aa6bd003ed3f..224e0aba6ef7 100644
--- a/pkgs/development/tools/misc/lsof/default.nix
+++ b/pkgs/development/tools/misc/lsof/default.nix
@@ -30,6 +30,10 @@ stdenv.mkDerivation rec {
 
   patches = [ ./dfile.patch ];
 
+  postPatch = stdenv.lib.optionalString stdenv.hostPlatform.isMusl ''
+    substituteInPlace dialects/linux/dlsof.h --replace "defined(__UCLIBC__)" 1
+  '';
+
   # Stop build scripts from searching global include paths
   LSOF_INCLUDE = "${stdenv.cc.libc}/include";
   configurePhase = "LINUX_CONF_CC=$CC_FOR_BUILD LSOF_CC=$CC LSOF_AR=\"$AR cr\" LSOF_RANLIB=$RANLIB ./Configure -n ${dialect}";
diff --git a/pkgs/development/tools/misc/lttng-ust/default.nix b/pkgs/development/tools/misc/lttng-ust/default.nix
index 827ddedaee32..bfdebec154ad 100644
--- a/pkgs/development/tools/misc/lttng-ust/default.nix
+++ b/pkgs/development/tools/misc/lttng-ust/default.nix
@@ -20,11 +20,13 @@ stdenv.mkDerivation rec {
     sha256 = "1avx4p71g9m3zvynhhhysxnpkqyhhlv42xiv9502bvp3nwfkgnqs";
   };
 
-  buildInputs = [ liburcu python ];
+  buildInputs = [ python ];
 
   preConfigure = ''
     patchShebangs .
   '';
+  
+  propagatedBuildInputs = [ liburcu ];
 
   meta = with stdenv.lib; {
     description = "LTTng Userspace Tracer libraries";
diff --git a/pkgs/development/tools/misc/openocd/default.nix b/pkgs/development/tools/misc/openocd/default.nix
index 2ab0dbd1b5f5..73c5b7623184 100644
--- a/pkgs/development/tools/misc/openocd/default.nix
+++ b/pkgs/development/tools/misc/openocd/default.nix
@@ -25,6 +25,12 @@ stdenv.mkDerivation rec {
     "--enable-remote-bitbang"
   ];
 
+  NIX_CFLAGS_COMPILE = [
+    "-Wno-implicit-fallthrough"
+    "-Wno-format-truncation"
+    "-Wno-format-overflow"
+  ];
+
   postInstall = ''
     mkdir -p "$out/etc/udev/rules.d"
     rules="$out/share/openocd/contrib/60-openocd.rules"
diff --git a/pkgs/development/tools/misc/patchelf/unstable.nix b/pkgs/development/tools/misc/patchelf/unstable.nix
index 626478798658..de68a4066d7d 100644
--- a/pkgs/development/tools/misc/patchelf/unstable.nix
+++ b/pkgs/development/tools/misc/patchelf/unstable.nix
@@ -10,6 +10,12 @@ stdenv.mkDerivation rec {
     sha256 = "1f1s8q3as3nrhcc1a8qc2z7imm644jfz44msn9sfv4mdynp2m2yb";
   };
 
+  # Drop test that fails on musl (?)
+  postPatch = stdenv.lib.optionalString stdenv.hostPlatform.isMusl ''
+    substituteInPlace tests/Makefile.am \
+      --replace "set-rpath-library.sh" ""
+  '';
+
   setupHook = [ ./setup-hook.sh ];
 
   nativeBuildInputs = [ autoreconfHook ];
diff --git a/pkgs/development/tools/misc/strace/default.nix b/pkgs/development/tools/misc/strace/default.nix
index 4c02b4daf1ef..e5f298a1cabc 100644
--- a/pkgs/development/tools/misc/strace/default.nix
+++ b/pkgs/development/tools/misc/strace/default.nix
@@ -2,17 +2,19 @@
 
 stdenv.mkDerivation rec {
   name = "strace-${version}";
-  version = "4.20";
+  version = "4.21";
 
   src = fetchurl {
     url = "mirror://sourceforge/strace/${name}.tar.xz";
-    sha256 = "08y5b07vb8jc7ak5xc3x2kx1ly6xiwv1gnppcqjs81kks66i9wsv";
+    sha256 = "1dvrwi6v9j6b9j6852zzlc61hxgiciadi1xsl89wzbzqlkxnahbd";
   };
 
   nativeBuildInputs = [ perl ];
 
   buildInputs = [ libunwind ]; # support -k
 
+  configureFlags = stdenv.lib.optional stdenv.hostPlatform.isAarch64 "--enable-mpers=check";
+
   meta = with stdenv.lib; {
     homepage = http://strace.sourceforge.net/;
     description = "A system call tracer for Linux";
diff --git a/pkgs/development/tools/misc/uhd/default.nix b/pkgs/development/tools/misc/uhd/default.nix
index 8212eccc6d13..78195e994c94 100644
--- a/pkgs/development/tools/misc/uhd/default.nix
+++ b/pkgs/development/tools/misc/uhd/default.nix
@@ -7,18 +7,29 @@
 #   SUBSYSTEMS=="usb", ATTRS{idVendor}=="fffe", ATTRS{idProduct}=="0002", MODE:="0666"
 #   SUBSYSTEMS=="usb", ATTRS{idVendor}=="2500", ATTRS{idProduct}=="0002", MODE:="0666"
 
-stdenv.mkDerivation rec {
-  name = "uhd-${version}";
-  version = "3.10.2.0";
+let
+  uhdVer = "003_010_003_000";
+  ImgVer = stdenv.lib.replaceStrings ["_"] ["."] uhdVer;
 
   # UHD seems to use three different version number styles: x.y.z, xxx_yyy_zzz
   # and xxx.yyy.zzz. Hrmpf...
+  version = "3.10.3.0";
+
+  # Firmware images are downloaded (pre-built) from:
+  # http://files.ettus.com/binaries/images/
+  uhdImagesSrc = fetchurl {
+    url = "http://files.ettus.com/binaries/images/uhd-images_${ImgVer}-release.tar.gz";
+    sha256 = "198awvw6zsh19ydgx5qry5yc6yahdval9wjrsqbyj51pnr6s5qvy";
+  };
+
+in stdenv.mkDerivation {
+  name = "uhd-${version}";
 
   src = fetchFromGitHub {
     owner = "EttusResearch";
     repo = "uhd";
-    rev = "release_003_010_002_000";
-    sha256 = "0g6f4amw7h0vr6faa1nc1zs3bc645binza0zqqx5cwgfxybv8cfy";
+    rev = "release_${uhdVer}";
+    sha256 = "1aj8qizbyz4shwawj3qlhl6pyyda59hhgm9cwrj7s5kfdi4vdlc3";
   };
 
   enableParallelBuilding = true;
@@ -31,13 +42,6 @@ stdenv.mkDerivation rec {
   # Build only the host software
   preConfigure = "cd host";
 
-  # Firmware images are downloaded (pre-built)
-  uhdImagesName = "uhd-images_003.007.003-release";
-  uhdImagesSrc = fetchurl {
-    url = "http://files.ettus.com/binaries/maint_images/archive/${uhdImagesName}.tar.gz";
-    sha256 = "1pv5c5902041494z0jfw623ca29pvylrw5klybbhklvn5wwlr6cv";
-  };
-
   postPhases = [ "installFirmware" ];
 
   installFirmware = ''
diff --git a/pkgs/development/tools/ocaml/omake/0.9.8.6-rc1.nix b/pkgs/development/tools/ocaml/omake/0.9.8.6-rc1.nix
index 9f318afc67d7..84365889638c 100644
--- a/pkgs/development/tools/ocaml/omake/0.9.8.6-rc1.nix
+++ b/pkgs/development/tools/ocaml/omake/0.9.8.6-rc1.nix
@@ -9,7 +9,7 @@ stdenv.mkDerivation {
   name = "${pname}-${version}";
 
   src = fetchurl {
-    url = "http://pkgs.fedoraproject.org/repo/pkgs/ocaml-omake/${pname}-${version}.tar.gz/fe39a476ef4e33b7ba2ca77a6bcaded2/${pname}-${version}.tar.gz";
+    url = "http://src.fedoraproject.org/repo/pkgs/ocaml-omake/${pname}-${version}.tar.gz/fe39a476ef4e33b7ba2ca77a6bcaded2/${pname}-${version}.tar.gz";
     sha256 = "1sas02pbj56m7wi5vf3vqrrpr4ynxymw2a8ybvfj2dkjf7q9ii13";
   };
   patchFlags = "-p0";
diff --git a/pkgs/development/tools/profiling/heaptrack/default.nix b/pkgs/development/tools/profiling/heaptrack/default.nix
index e97ff61a0dc0..f5f9a15dd00a 100644
--- a/pkgs/development/tools/profiling/heaptrack/default.nix
+++ b/pkgs/development/tools/profiling/heaptrack/default.nix
@@ -1,24 +1,24 @@
 {
   stdenv, fetchFromGitHub, cmake, extra-cmake-modules,
-  zlib, boost162, libunwind, elfutils, sparsehash,
-  qtbase, kio, kitemmodels, threadweaver, kconfigwidgets, kcoreaddons,
+  zlib, boost, libunwind, elfutils, sparsehash,
+  qtbase, kio, kitemmodels, threadweaver, kconfigwidgets, kcoreaddons, kdiagram
 }:
 
 stdenv.mkDerivation rec {
   name = "heaptrack-${version}";
-  version = "2017-10-30";
+  version = "2018-01-28";
 
   src = fetchFromGitHub {
     owner = "KDE";
     repo = "heaptrack";
-    rev = "2bf49bc4fed144e004a9cabd40580a0f0889758f";
-    sha256 = "0sqxk5cc8r2vsj5k2dj9jkd1f2x2yj3mxgsp65g7ls01bgga0i4d";
+    rev = "a4534d52788ab9814efca1232d402b2eb319342c";
+    sha256 = "00xfv51kavvcmwgfmcixx0k5vhd06gkj5q0mm8rwxiw6215xp41a";
   };
 
   nativeBuildInputs = [ cmake extra-cmake-modules ];
   buildInputs = [
-    zlib boost162 libunwind elfutils sparsehash
-    qtbase kio kitemmodels threadweaver kconfigwidgets kcoreaddons
+    zlib boost libunwind elfutils sparsehash
+    qtbase kio kitemmodels threadweaver kconfigwidgets kcoreaddons kdiagram
   ];
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/tools/profiling/systemtap/default.nix b/pkgs/development/tools/profiling/systemtap/default.nix
index b397f02665bc..7b313f301413 100644
--- a/pkgs/development/tools/profiling/systemtap/default.nix
+++ b/pkgs/development/tools/profiling/systemtap/default.nix
@@ -1,5 +1,5 @@
 { fetchgit, pkgconfig, gettext, runCommand, makeWrapper
-, elfutils, kernel, gnumake, python2, pythonPackages
+, elfutils, kernel, gnumake, python2, python2Packages
 }:
 
 let
@@ -17,7 +17,7 @@ let
     name = "systemtap-${version}";
     src = fetchgit { inherit url rev sha256; };
   nativeBuildInputs = [ pkgconfig ];
-    buildInputs = [ elfutils gettext python2 pythonPackages.setuptools ];
+    buildInputs = [ elfutils gettext python2 python2Packages.setuptools ];
     # FIXME: Workaround for bug in kbuild, where quoted -I"/foo" flags would get mangled in out-of-tree kbuild dirs
     postPatch = ''
       substituteInPlace buildrun.cxx --replace \
@@ -39,6 +39,8 @@ let
     done
   '';
 
+  pypkgs = with python2Packages; makePythonPath [ pyparsing ];
+
 in runCommand "systemtap-${kernel.version}-${version}" {
   inherit stapBuild kernelBuildDir;
   buildInputs = [ makeWrapper ];
@@ -54,8 +56,10 @@ in runCommand "systemtap-${kernel.version}-${version}" {
   for bin in $stapBuild/bin/*; do # hello emacs */
     ln -s $bin $out/bin
   done
-  rm $out/bin/stap
+  rm $out/bin/stap $out/bin/dtrace
   makeWrapper $stapBuild/bin/stap $out/bin/stap \
     --add-flags "-r $kernelBuildDir" \
     --prefix PATH : ${lib.makeBinPath [ stdenv.cc.cc stdenv.cc.bintools elfutils gnumake ]}
+  makeWrapper $stapBuild/bin/dtrace $out/bin/dtrace \
+    --prefix PYTHONPATH : ${pypkgs}
 ''
diff --git a/pkgs/development/tools/redis-dump/default.nix b/pkgs/development/tools/redis-dump/default.nix
index 054517ea547c..88c975b57352 100644
--- a/pkgs/development/tools/redis-dump/default.nix
+++ b/pkgs/development/tools/redis-dump/default.nix
@@ -9,6 +9,7 @@ bundlerEnv {
   buildInputs = [ perl autoconf ];
 
   meta = with lib; {
+    broken = true; # needs ruby 2.0
     description = "Backup and restore your Redis data to and from JSON";
     homepage    = http://delanotes.com/redis-dump/;
     license     = licenses.mit;
diff --git a/pkgs/development/tools/reflex/default.nix b/pkgs/development/tools/reflex/default.nix
new file mode 100644
index 000000000000..3e69b4ffa073
--- /dev/null
+++ b/pkgs/development/tools/reflex/default.nix
@@ -0,0 +1,24 @@
+{ lib, fetchFromGitHub, buildGoPackage }:
+
+
+buildGoPackage rec {
+  name = "reflex-${version}";
+  version = "0.2.0";
+
+  goPackagePath = "github.com/cespare/reflex";
+
+  src = fetchFromGitHub {
+    owner = "cespare";
+    repo = "reflex";
+    rev = "v${version}";
+    sha256 = "0ccwjmf8rjh03hpbmfiy70ai9dhgvb5vp7albffq0cmv2sl69dqr";
+  };
+
+  meta = with lib; {
+    description = "A small tool to watch a directory and rerun a command when certain files change";
+    homepage = https://github.com/cespare/reflex;
+    license = licenses.mit;
+    platforms = platforms.unix;
+    maintainers = with maintainers; [ nicknovitski ];
+  };
+}
diff --git a/pkgs/development/tools/rhc/default.nix b/pkgs/development/tools/rhc/default.nix
index 634ca28aaf13..46665e8b47ec 100644
--- a/pkgs/development/tools/rhc/default.nix
+++ b/pkgs/development/tools/rhc/default.nix
@@ -1,4 +1,4 @@
-{ lib, bundlerEnv, ruby_2_2, stdenv, makeWrapper }:
+{ lib, bundlerEnv, ruby, stdenv, makeWrapper }:
 
 stdenv.mkDerivation rec {
   name = "rhc-1.38.7";
@@ -6,7 +6,7 @@ stdenv.mkDerivation rec {
   env = bundlerEnv {
     name = "rhc-1.38.7-gems";
 
-    ruby = ruby_2_2;
+    inherit ruby;
 
     gemdir = ./.;
   };
@@ -21,6 +21,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = with lib; {
+    broken = true; # requires ruby 2.2
     homepage = https://github.com/openshift/rhc;
     description = "OpenShift client tools";
     license = licenses.asl20;
diff --git a/pkgs/development/tools/rust/racerd/default.nix b/pkgs/development/tools/rust/racerd/default.nix
index f3cb4e789502..058185acdbe4 100644
--- a/pkgs/development/tools/rust/racerd/default.nix
+++ b/pkgs/development/tools/rust/racerd/default.nix
@@ -4,17 +4,17 @@ with rustPlatform;
 
 buildRustPackage rec {
   name = "racerd-${version}";
-  version = "2017-02-17";
+  version = "2017-09-15";
   src = fetchFromGitHub {
     owner = "jwilm";
     repo = "racerd";
-    rev = "e3f3ff010fce2c67195750d9a6a669ffb3c2ac5f";
-    sha256 = "125pmbkjnjh83xwikcwfbb8g150nldz7wh0ly1gv9kl1b521dydk";
+    rev = "29cd4c6fd2a9301e49931c2e065b2e10c4b587e4";
+    sha256 = "0knz881mjhd8q2i8ydggaa7lfpiqy11wjmnv5p80n1d8zca6yb7z";
   };
 
   doCheck = false;
 
-  cargoSha256 = "1h7hm7vkk1grah6pn5ydfi5pzc2kd48lh2kxim5jlvrxhd2dingg";
+  cargoSha256 = "00gxj98zdkbrc5cxd4w5hk7iwv9a1kwa535hhspx9xd02r4d8rzl";
 
   buildInputs = [ makeWrapper ];
 
diff --git a/pkgs/development/tools/rust/rustup/default.nix b/pkgs/development/tools/rust/rustup/default.nix
index 6a2d5758f1fb..65a4a05633c0 100644
--- a/pkgs/development/tools/rust/rustup/default.nix
+++ b/pkgs/development/tools/rust/rustup/default.nix
@@ -4,15 +4,15 @@
 
 rustPlatform.buildRustPackage rec {
   name = "rustup-${version}";
-  version = "2017-10-29";
+  version = "1.11.0";
 
-  cargoSha256 = "1xwxv8y9xjgdmm92ldrn9m9fml2zb5h7qqm7dhw63j6psb3ajqrw";
+  cargoSha256 = "1r9mnj3x9sn16hi1r09gl5q0cnsa2g6kbjw2g115858i2a9k6hkr";
 
   src = fetchFromGitHub {
     owner = "rust-lang-nursery";
     repo = "rustup.rs";
-    rev = "13c8092507bf646f3ef6a621fe2c5a68212e800f";
-    sha256 = "1qd01rjk9qpfzgqs35f5nxrcf00kmf76zwmgj3yzdig9zymjwndg";
+    rev = version;
+    sha256 = "05rbgkz4fk6c1x6bpmpx108bg2qcrf6vv3yfz378s7bmr3l319iz";
   };
 
   nativeBuildInputs = [ pkgconfig ];
@@ -35,23 +35,23 @@ rustPlatform.buildRustPackage rec {
   postInstall = ''
     pushd $out/bin
     mv rustup-init rustup
-    for link in cargo rustc rustdoc rust-gdb rust-lldb; do
+    for link in cargo rustc rustdoc rust-gdb rust-lldb rls rustfmt cargo-fmt; do
       ln -s rustup $link
     done
     popd
 
     # tries to create .rustup
     export HOME=$(mktemp -d)
-    mkdir -p "$out/share/"{bash-completion/completions,fish/completions,zsh/site-functions}
+    mkdir -p "$out/share/"{bash-completion/completions,fish/vendor_completions.d,zsh/site-functions}
     $out/bin/rustup completions bash > "$out/share/bash-completion/completions/rustup"
-    $out/bin/rustup completions fish > "$out/share/fish/completions/rustup.fish"
+    $out/bin/rustup completions fish > "$out/share/fish/vendor_completions.d/rustup.fish"
     $out/bin/rustup completions zsh >  "$out/share/zsh/site-functions/_rustup"
   '';
 
   meta = with stdenv.lib; {
     description = "The Rust toolchain installer";
     homepage = https://www.rustup.rs/;
-    license = licenses.mit;
+    license = with licenses; [ asl20 /* or */ mit ];
     maintainers = [ maintainers.mic92 ];
   };
 }
diff --git a/pkgs/development/tools/selenium/chromedriver/default.nix b/pkgs/development/tools/selenium/chromedriver/default.nix
index 61f5f93ebfaa..554a5585f150 100644
--- a/pkgs/development/tools/selenium/chromedriver/default.nix
+++ b/pkgs/development/tools/selenium/chromedriver/default.nix
@@ -4,19 +4,14 @@
 }:
 let
   allSpecs = {
-    "i686-linux" = {
-      system = "linux32";
-      sha256 = "13fngjg2v0l3vhlmjnffy785ckgk2kbpm7307li75vinkcly91cj";
-    };
-
     "x86_64-linux" = {
       system = "linux64";
-      sha256 = "0x5vnmnw6mws6iw9s0kcm4crx9gfgy0vjjpk1v0wk7jpn6d0bl47";
+      sha256 = "13iyz6579yw4fk9dr4nf2pdj55v1iflj8yf9a4zz7qw5996d5yk7";
     };
 
     "x86_64-darwin" = {
       system = "mac64";
-      sha256 = "09y8ijj75q5a7snzchxinxfq2ad2sw0f30zi0p3hqf1n88y28jq6";
+      sha256 = "11xa31bxhrq0p7kd3j76dihp73abdbmbwdng5454m1wir6yj25f1";
     };
   };
 
@@ -33,7 +28,7 @@ let
 in
 stdenv.mkDerivation rec {
   name = "chromedriver-${version}";
-  version = "2.33";
+  version = "2.35";
 
   src = fetchurl {
     url = "http://chromedriver.storage.googleapis.com/${version}/chromedriver_${spec.system}.zip";
diff --git a/pkgs/development/tools/skopeo/default.nix b/pkgs/development/tools/skopeo/default.nix
index 0f720f1f7e32..de0d7fc54de2 100644
--- a/pkgs/development/tools/skopeo/default.nix
+++ b/pkgs/development/tools/skopeo/default.nix
@@ -1,39 +1,38 @@
-{ stdenv, lib, buildGoPackage, fetchFromGitHub, gpgme, libgpgerror, devicemapper, btrfs-progs, pkgconfig, ostree }:
+{ stdenv, lib, buildGoPackage, fetchFromGitHub, runCommand
+, gpgme, libgpgerror, devicemapper, btrfs-progs, pkgconfig, ostree, libselinux }:
 
 with stdenv.lib;
 
+let
+  version = "0.1.28";
+
+  src = fetchFromGitHub {
+    rev = "v${version}";
+    owner = "projectatomic";
+    repo = "skopeo";
+    sha256 = "068nwrr3nr27alravcq1sxyhdd5jjr24213vdgn1dqva3885gbi0";
+  };
+
+  defaultPolicyFile = runCommand "skopeo-default-policy.json" {} "cp ${src}/default-policy.json $out";
+
+in
 buildGoPackage rec {
   name = "skopeo-${version}";
-  version = "0.1.27";
-  rev = "v${version}";
+  inherit src;
 
   goPackagePath = "github.com/projectatomic/skopeo";
   excludedPackages = "integration";
 
   nativeBuildInputs = [ pkgconfig ];
-  buildInputs = [ gpgme libgpgerror devicemapper btrfs-progs ostree ];
+  buildInputs = [ gpgme libgpgerror devicemapper btrfs-progs ostree libselinux ];
 
-  src = fetchFromGitHub {
-    inherit rev;
-    owner = "projectatomic";
-    repo = "skopeo";
-    sha256 = "1xwwzxjczz8qdk1rf0h78qd3vk9mxxb8yi6f8kfqvcdcsvkajd5g";
-  };
-
-  patches = [
-    ./path.patch
-  ];
+  buildFlagsArray = "-ldflags= -X github.com/projectatomic/skopeo/vendor/github.com/containers/image/signature.systemDefaultPolicyPath=${defaultPolicyFile}";
 
   preBuild = ''
     export CGO_CFLAGS="-I${getDev gpgme}/include -I${getDev libgpgerror}/include -I${getDev devicemapper}/include -I${getDev btrfs-progs}/include"
     export CGO_LDFLAGS="-L${getLib gpgme}/lib -L${getLib libgpgerror}/lib -L${getLib devicemapper}/lib"
   '';
 
-  postInstall = ''
-    mkdir $bin/etc
-    cp -v ./go/src/github.com/projectatomic/skopeo/default-policy.json $bin/etc/default-policy.json
-  '';
-
   meta = {
     description = "A command line utility for various operations on container images and image repositories";
     homepage = https://github.com/projectatomic/skopeo;
diff --git a/pkgs/development/tools/skopeo/path.patch b/pkgs/development/tools/skopeo/path.patch
deleted file mode 100644
index fe456b58e548..000000000000
--- a/pkgs/development/tools/skopeo/path.patch
+++ /dev/null
@@ -1,25 +0,0 @@
-diff --git a/cmd/skopeo/main.go b/cmd/skopeo/main.go
-index 50e29b2..7108df5 100644
---- a/cmd/skopeo/main.go
-+++ b/cmd/skopeo/main.go
-@@ -3,6 +3,7 @@ package main
- import (
- 	"fmt"
- 	"os"
-+	"path/filepath"
- 
- 	"github.com/Sirupsen/logrus"
- 	"github.com/containers/image/signature"
-@@ -88,6 +89,11 @@ func getPolicyContext(c *cli.Context) (*signature.PolicyContext, error) {
- 	policyPath := c.GlobalString("policy")
- 	var policy *signature.Policy // This could be cached across calls, if we had an application context.
- 	var err error
-+	var dir string
-+	if policyPath == "" {
-+		dir, err = filepath.Abs(filepath.Dir(os.Args[0]))
-+		policyPath = dir + "/../etc/default-policy.json"
-+	}
- 	if c.GlobalBool("insecure-policy") {
- 		policy = &signature.Policy{Default: []signature.PolicyRequirement{signature.NewPRInsecureAcceptAnything()}}
- 	} else if policyPath == "" {
- 
diff --git a/pkgs/development/tools/yaml2json/default.nix b/pkgs/development/tools/yaml2json/default.nix
new file mode 100644
index 000000000000..1a8d7f13aff5
--- /dev/null
+++ b/pkgs/development/tools/yaml2json/default.nix
@@ -0,0 +1,24 @@
+{ stdenv, buildGoPackage, fetchFromGitHub }:
+
+
+buildGoPackage rec {
+  name = "yaml2json-${version}";
+  version = "unstable-2017-05-03";
+  goPackagePath = "github.com/bronze1man/yaml2json";
+
+  goDeps = ./deps.nix;
+
+  src = fetchFromGitHub {
+    rev = "ee8196e587313e98831c040c26262693d48c1a0c";
+    owner = "bronze1man";
+    repo = "yaml2json";
+    sha256 = "16a2sqzbam5adbhfvilnpdabzwncs7kgpr0cn4gp09h2imzsprzw";
+  };
+
+  meta = with stdenv.lib; {
+    homepage = https://github.com/bronze1man/yaml2json;
+    description = "Convert yaml to json";
+    license = with licenses; [ mit ];
+    maintainers = [ maintainers.adisbladis ];
+  };
+}
diff --git a/pkgs/development/tools/yaml2json/deps.nix b/pkgs/development/tools/yaml2json/deps.nix
new file mode 100644
index 000000000000..f907520cc872
--- /dev/null
+++ b/pkgs/development/tools/yaml2json/deps.nix
@@ -0,0 +1,11 @@
+[
+  {
+    goPackagePath = "gopkg.in/yaml.v2";
+    fetch = {
+      type = "git";
+      url = "https://gopkg.in/yaml.v2";
+      rev = "d670f9405373e636a5a2765eea47fac0c9bc91a4";
+      sha256 = "1w1xid51n8v1mydn2m3vgggw8qgpd5a5sr62snsc77d99fpjsrs0";
+    };
+  }
+]
diff --git a/pkgs/development/web/nodejs/v6.nix b/pkgs/development/web/nodejs/v6.nix
index 3688ee0b7ef0..c2ca341751b5 100644
--- a/pkgs/development/web/nodejs/v6.nix
+++ b/pkgs/development/web/nodejs/v6.nix
@@ -5,7 +5,7 @@ let
 in
   buildNodejs {
     inherit enableNpm;
-    version = "6.12.2";
-    sha256 = "1z6sn4b973sxw0h9hd38rjq6cqdkzl5gsd48f793abvarwgpqrrk";
+    version = "6.13.0";
+    sha256 = "012dpfqxsrmd3xc4dmq0mik1kab4czf56s8wm2jvm7xjqvi6y5mp";
     patches = lib.optionals stdenv.isDarwin [ ./no-xcode.patch ];
   }
diff --git a/pkgs/development/web/nodejs/v9.nix b/pkgs/development/web/nodejs/v9.nix
index f93dba1aec48..79f364be2000 100644
--- a/pkgs/development/web/nodejs/v9.nix
+++ b/pkgs/development/web/nodejs/v9.nix
@@ -5,7 +5,7 @@ let
 in
   buildNodejs {
     inherit enableNpm;
-    version = "9.4.0";
-    sha256 = "035j44xkji9dxddlqws6ykkbyphbkhwhz700arpgz20jz3qf20vm";
+    version = "9.5.0";
+    sha256 = "0v8lspfca820mf45dj9hb56q00syhrqw5wmqmy1vnrcb6wx4csv6";
     patches = lib.optionals stdenv.isDarwin [ ./no-xcode-v7.patch ];
   }
diff --git a/pkgs/development/web/postman/default.nix b/pkgs/development/web/postman/default.nix
new file mode 100644
index 000000000000..605e5de03119
--- /dev/null
+++ b/pkgs/development/web/postman/default.nix
@@ -0,0 +1,89 @@
+{ stdenv, lib, gnome2, fetchurl, pkgs, xlibs, udev, makeWrapper, makeDesktopItem }:
+
+stdenv.mkDerivation rec {
+  name = "postman-${version}";
+  version = "5.5.2";
+
+  src = fetchurl {
+    url = "https://dl.pstmn.io/download/version/${version}/linux64";
+    sha1 = "68886197A8375E860AB880547838FEFC9E12FC64";
+    name = "${name}.tar.gz";
+  };
+
+  nativeBuildInputs = [ makeWrapper ];
+
+  dontPatchELF = true;
+
+  buildPhase = ":";   # nothing to build
+
+  desktopItem = makeDesktopItem {
+    name = "postman";
+    exec = "postman";
+    icon = "$out/share/postman/resources/app/assets/icon.png";
+    comment = "API Development Environment";
+    desktopName = "Postman";
+    genericName = "Postman";
+    categories = "Application;Development;";
+  };
+
+  installPhase = ''
+    mkdir -p $out/share/postman
+    mkdir -p $out/share/applications
+    cp -R * $out/share/postman
+    mkdir -p $out/bin
+    ln -s $out/share/postman/Postman $out/bin/postman
+    ln -s ${desktopItem}/share/applications/* $out/share/applications/
+  '';
+
+  preFixup = let
+    libPath = lib.makeLibraryPath [
+      stdenv.cc.cc.lib
+      gnome2.pango
+      gnome2.GConf
+      pkgs.atk
+      pkgs.alsaLib
+      pkgs.cairo
+      pkgs.cups
+      pkgs.dbus_daemon.lib
+      pkgs.expat
+      pkgs.gdk_pixbuf
+      pkgs.glib
+      pkgs.gtk2-x11
+      pkgs.freetype
+      pkgs.fontconfig
+      pkgs.nss
+      pkgs.nspr
+      pkgs.udev.lib
+      xlibs.libX11
+      xlibs.libxcb
+      xlibs.libXi
+      xlibs.libXcursor
+      xlibs.libXdamage
+      xlibs.libXrandr
+      xlibs.libXcomposite
+      xlibs.libXext
+      xlibs.libXfixes
+      xlibs.libXrender
+      xlibs.libX11
+      xlibs.libXtst
+      xlibs.libXScrnSaver
+    ];
+  in ''
+    patchelf \
+      --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" \
+      --set-rpath "${libPath}:$out/share/postman" \
+      $out/share/postman/Postman
+    patchelf --set-rpath "${libPath}" $out/share/postman/libnode.so
+    patchelf --set-rpath "${libPath}" $out/share/postman/libffmpeg.so
+
+    wrapProgram $out/share/postman/Postman --prefix LD_LIBRARY_PATH : ${libPath}
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = https://www.getpostman.com;
+    description = "API Development Environment";
+    license = stdenv.lib.licenses.postman;
+    platforms = [ "x86_64-linux" ];
+    maintainers = with maintainers; [ xurei ];
+  };
+}
diff --git a/pkgs/games/2048-in-terminal/default.nix b/pkgs/games/2048-in-terminal/default.nix
index 288c852b11e3..5d91bc04114b 100644
--- a/pkgs/games/2048-in-terminal/default.nix
+++ b/pkgs/games/2048-in-terminal/default.nix
@@ -13,6 +13,10 @@ stdenv.mkDerivation rec {
 
   buildInputs = [ ncurses ];
 
+  prePatch = ''
+    sed -i '1i#include <fcntl.h>\n' save.c
+  '';
+
   enableParallelBuilding = true;
 
   preInstall = ''
diff --git a/pkgs/games/armagetronad/default.nix b/pkgs/games/armagetronad/default.nix
index 21f545100b31..0fb75b3d345b 100644
--- a/pkgs/games/armagetronad/default.nix
+++ b/pkgs/games/armagetronad/default.nix
@@ -15,6 +15,8 @@ stdenv.mkDerivation {
 
   NIX_LDFLAGS = [ "-lSDL_image" ];
 
+  enableParallelBuilding = true;
+
   configureFlags = [ "--disable-etc" ];
   buildInputs = [ SDL SDL_image libxml2 libjpeg libpng mesa zlib ];
 
diff --git a/pkgs/games/assaultcube/assaultcube-next.patch b/pkgs/games/assaultcube/assaultcube-next.patch
new file mode 100644
index 000000000000..92fc79966707
--- /dev/null
+++ b/pkgs/games/assaultcube/assaultcube-next.patch
@@ -0,0 +1,11 @@
+--- 1.1.0.4/source/src/Makefile
++++ 1.1.0.4/source/src/Makefile
+@@ -6,7 +6,7 @@
+ # found to have been caused by the g++ compiler in the past. This seems to have
+ # been fixed now by relaxing the optimization that g++ does, so although we'll
+ # continue using clang++ (just in case), you can use g++ if you prefer.
+-CXX=clang++
++#CXX=clang++
+
+ # Changing this to ACDEBUG=yes will compile a debug version of AssaultCube.
+ ACDEBUG=no
diff --git a/pkgs/games/assaultcube/default.nix b/pkgs/games/assaultcube/default.nix
new file mode 100644
index 000000000000..cef48978b6d0
--- /dev/null
+++ b/pkgs/games/assaultcube/default.nix
@@ -0,0 +1,82 @@
+{ fetchFromGitHub, stdenv, makeDesktopItem, openal, pkgconfig, libogg,
+  libvorbis, SDL, SDL_image, makeWrapper, zlib,
+  client ? true, server ? true }:
+
+with stdenv.lib;
+
+stdenv.mkDerivation rec {
+
+  # master branch has legacy (1.2.0.2) protocol 1201 and gcc 6 fix.
+  pname = "assaultcube";
+  version = "01052017";
+  name = "${pname}-${version}";
+
+  meta = {
+    description = "Fast and fun first-person-shooter based on the Cube fps";
+    homepage = http://assault.cubers.net;
+    maintainers = [ maintainers.genesis ];
+    platforms = platforms.linux; # should work on darwin with a little effort.
+    license = stdenv.lib.licenses.zlib;
+  };
+
+  src = fetchFromGitHub {
+    owner = "assaultcube";
+    repo  = "AC";
+    rev = "9f537b0876a39d7686e773040469fbb1417de18b";
+    sha256 = "0nvckn67mmfaa7x3j41xyxjllxqzfx1dxg8pnqsaak3kkzds34pl";
+  };
+
+  # ${branch} not accepted as a value ?
+  # TODO: write a functional BUNDLED_ENET option and restore it in deps.
+  patches = [ ./assaultcube-next.patch ];
+
+  nativeBuildInputs = [ pkgconfig ];
+
+  # add optional for server only ?
+  buildInputs = [ makeWrapper openal SDL SDL_image libogg libvorbis zlib ];
+
+  #makeFlags = [ "CXX=g++" ];
+
+  targets = (optionalString server "server") + (optionalString client " client");
+  buildPhase = ''
+    make -C source/src ${targets}
+  '';
+
+  desktop = makeDesktopItem {
+    name = "AssaultCube";
+    desktopName = "AssaultCube";
+    comment = "A multiplayer, first-person shooter game, based on the CUBE engine. Fast, arcade gameplay.";
+    genericName = "First-person shooter";
+    categories = "Application;Game;ActionGame;Shooter";
+    icon = "assaultcube.png";
+    exec = "${pname}";
+  };
+
+  gamedatadir = "/share/games/${pname}";
+
+  installPhase = ''
+
+    bindir=$out/bin
+
+    mkdir -p $bindir $out/$gamedatadir
+
+    cp -r config packages $out/$gamedatadir
+
+    # install custom script
+    substituteAll ${./launcher.sh} $bindir/assaultcube
+    chmod +x $bindir/assaultcube
+
+    if (test -e source/src/ac_client) then
+      cp source/src/ac_client $bindir
+      mkdir -p $out/share/applications
+      cp ${desktop}/share/applications/* $out/share/applications
+      install -Dpm644 packages/misc/icon.png $out/share/icons/assaultcube.png
+      install -Dpm644 packages/misc/icon.png $out/share/pixmaps/assaultcube.png
+    fi
+
+    if (test -e source/src/ac_server) then
+      cp source/src/ac_server $bindir
+      ln -s $bindir/${pname} $bindir/${pname}-server
+    fi
+    '';
+}
diff --git a/pkgs/games/assaultcube/launcher.sh b/pkgs/games/assaultcube/launcher.sh
new file mode 100644
index 000000000000..331cb861f66c
--- /dev/null
+++ b/pkgs/games/assaultcube/launcher.sh
@@ -0,0 +1,20 @@
+#!@shell@
+# original scripts are very awful
+
+CUBE_DIR=@out@@gamedatadir@
+
+case $(basename "$0") in
+  assaultcube-server)
+    CUBE_OPTIONS="-Cconfig/servercmdline.txt"
+    BINARYPATH=@out@/bin/ac_server
+    ;;
+  assaultcube)
+    CUBE_OPTIONS="--home=${HOME}/.assaultcube/v1.2next --init"
+    BINARYPATH=@out@/bin/ac_client
+    ;;
+  *) echo "$0" is not supported.
+     exit 1
+esac
+
+cd $CUBE_DIR
+exec "${BINARYPATH}" ${CUBE_OPTIONS} "$@"
diff --git a/pkgs/games/cataclysm-dda/default.nix b/pkgs/games/cataclysm-dda/default.nix
index be6f32654305..a3adec384015 100644
--- a/pkgs/games/cataclysm-dda/default.nix
+++ b/pkgs/games/cataclysm-dda/default.nix
@@ -1,5 +1,6 @@
 { fetchFromGitHub, stdenv, pkgconfig, ncurses, lua, SDL2, SDL2_image, SDL2_ttf,
-SDL2_mixer, freetype, gettext, Cocoa, libicns }:
+SDL2_mixer, freetype, gettext, Cocoa, libicns,
+tiles ? true }:
 
 stdenv.mkDerivation rec {
   version = "0.C";
@@ -13,36 +14,44 @@ stdenv.mkDerivation rec {
   };
 
   nativeBuildInputs = [ pkgconfig ]
-    ++ stdenv.lib.optionals stdenv.isDarwin [ libicns ];
+    ++ stdenv.lib.optionals (tiles && stdenv.isDarwin) [ libicns ];
 
-  buildInputs = [ ncurses lua SDL2 SDL2_image SDL2_ttf SDL2_mixer freetype gettext ]
-    ++ stdenv.lib.optionals stdenv.isDarwin [ Cocoa ];
+  buildInputs = with stdenv.lib; [ ncurses lua gettext ]
+    ++ optionals tiles [ SDL2 SDL2_image SDL2_ttf SDL2_mixer freetype ]
+    ++ optionals (tiles && stdenv.isDarwin) [ Cocoa ];
 
   patches = [ ./patches/fix_locale_dir.patch ];
 
   postPatch = ''
     patchShebangs .
-    sed -i Makefile \
-      -e 's,-Werror,,g'
-
-    sed '1i#include <cmath>' \
-      -i src/{crafting,skill,weather_data,melee,vehicle,overmap,iuse_actor}.cpp
   '';
 
-  makeFlags = [
-    "PREFIX=$(out) LUA=1 TILES=1 SOUND=1 RELEASE=1 USE_HOME_DIR=1"
+  makeFlags = with stdenv.lib; [
+    "PREFIX=$(out)"
+    "LUA=1"
+    "RELEASE=1"
+    "USE_HOME_DIR=1"
     # "LANGUAGES=all"  # vanilla C:DDA installs all translations even without this flag!
-  ] ++ stdenv.lib.optionals stdenv.isDarwin [
-    "NATIVE=osx CLANG=1"
+  ] ++ optionals tiles [
+    "TILES=1"
+    "SOUND=1"
+  ] ++ optionals stdenv.isDarwin [
+    "NATIVE=osx"
+    "CLANG=1"
     "OSX_MIN=10.6"  # SDL for macOS only supports deploying on 10.6 and above
+  ] ++ optionals stdenv.cc.isGNU [
+    "WARNINGS+=-Wno-deprecated-declarations"
+    "WARNINGS+=-Wno-ignored-attributes"
+  ] ++ optionals stdenv.cc.isClang [
+    "WARNINGS+=-Wno-inconsistent-missing-override"
   ];
 
-  postBuild = stdenv.lib.optionalString stdenv.isDarwin ''
+  postBuild = stdenv.lib.optionalString (tiles && stdenv.isDarwin) ''
     # iconutil on macOS is not available in nixpkgs
     png2icns data/osx/AppIcon.icns data/osx/AppIcon.iconset/*
   '';
 
-  postInstall = stdenv.lib.optionalString stdenv.isDarwin ''
+  postInstall = stdenv.lib.optionalString (tiles && stdenv.isDarwin) ''
     app=$out/Applications/Cataclysm.app
     install -D -m 444 data/osx/Info.plist -t $app/Contents
     install -D -m 444 data/osx/AppIcon.icns -t $app/Contents/Resources
@@ -83,7 +92,7 @@ stdenv.mkDerivation rec {
       substances or radiation, now more closely resemble insects, birds or fish
       than their original form.
     '';
-    homepage = http://en.cataclysmdda.com/;
+    homepage = http://cataclysmdda.org/;
     license = licenses.cc-by-sa-30;
     maintainers = [ maintainers.skeidel ];
     platforms = platforms.unix;
diff --git a/pkgs/games/cataclysm-dda/git.nix b/pkgs/games/cataclysm-dda/git.nix
index 3d8ec7d68448..fcc2481cb695 100644
--- a/pkgs/games/cataclysm-dda/git.nix
+++ b/pkgs/games/cataclysm-dda/git.nix
@@ -1,5 +1,6 @@
 { fetchFromGitHub, stdenv, pkgconfig, ncurses, lua, SDL2, SDL2_image, SDL2_ttf,
-SDL2_mixer, freetype, gettext, CoreFoundation, Cocoa }:
+SDL2_mixer, freetype, gettext, CoreFoundation, Cocoa,
+tiles ? true }:
 
 stdenv.mkDerivation rec {
   version = "2017-12-09";
@@ -14,28 +15,38 @@ stdenv.mkDerivation rec {
 
   nativeBuildInputs = [ pkgconfig ];
 
-  buildInputs = [ ncurses lua SDL2 SDL2_image SDL2_ttf SDL2_mixer freetype gettext ]
-    ++ stdenv.lib.optionals stdenv.isDarwin [ CoreFoundation Cocoa ];
+  buildInputs = with stdenv.lib; [ ncurses lua gettext ]
+    ++ optionals stdenv.isDarwin [ CoreFoundation ]
+    ++ optionals tiles [ SDL2 SDL2_image SDL2_ttf SDL2_mixer freetype ]
+    ++ optionals (tiles && stdenv.isDarwin) [ Cocoa ];
 
   patches = [ ./patches/fix_locale_dir_git.patch ];
 
   postPatch = ''
     patchShebangs .
-    sed -i Makefile \
-      -e 's,-Werror,,g'
-
-    sed '1i#include <cmath>' \
-      -i src/{crafting,skill,weather_data,melee,vehicle,overmap,iuse_actor}.cpp
+    sed -i data/xdg/com.cataclysmdda.cataclysm-dda.desktop \
+        -e "s,\(Exec=\)\(cataclysm-tiles\),\1$out/bin/\2,"
   '';
 
-  makeFlags = [
-    "PREFIX=$(out) LUA=1 TILES=1 SOUND=1 RELEASE=1 USE_HOME_DIR=1"
+  makeFlags = with stdenv.lib; [
+    "PREFIX=$(out)"
+    "LUA=1"
+    "RELEASE=1"
+    "USE_HOME_DIR=1"
     "LANGUAGES=all"
-  ] ++ stdenv.lib.optionals stdenv.isDarwin [
-    "NATIVE=osx CLANG=1"
+    "VERSION=git-${version}-${substring 0 8 src.rev}"
+  ] ++ optionals tiles [
+    "TILES=1"
+    "SOUND=1"
+  ] ++ optionals stdenv.isDarwin [
+    "NATIVE=osx"
+    "CLANG=1"
   ];
 
-  postInstall = stdenv.lib.optionalString stdenv.isDarwin ''
+  postInstall = with stdenv.lib; optionalString (tiles && !stdenv.isDarwin) ''
+    install -D -m 444 data/xdg/com.cataclysmdda.cataclysm-dda.desktop -T $out/share/applications/cataclysm-dda.desktop
+    install -D -m 444 data/xdg/cataclysm-dda.svg -t $out/share/icons/hicolor/scalable/apps
+  '' + optionalString (tiles && stdenv.isDarwin) ''
     app=$out/Applications/Cataclysm.app
     install -D -m 444 data/osx/Info.plist -t $app/Contents
     install -D -m 444 data/osx/AppIcon.icns -t $app/Contents/Resources
@@ -78,7 +89,7 @@ stdenv.mkDerivation rec {
       substances or radiation, now more closely resemble insects, birds or fish
       than their original form.
     '';
-    homepage = http://en.cataclysmdda.com/;
+    homepage = http://cataclysmdda.org/;
     license = licenses.cc-by-sa-30;
     platforms = platforms.unix;
   };
diff --git a/pkgs/games/dxx-rebirth/assets.nix b/pkgs/games/dxx-rebirth/assets.nix
new file mode 100644
index 000000000000..1fd64f5b00d0
--- /dev/null
+++ b/pkgs/games/dxx-rebirth/assets.nix
@@ -0,0 +1,55 @@
+{ stdenv, requireFile, gogUnpackHook }:
+
+let
+  generic = ver: source: let
+    pname = "descent${toString ver}";
+  in stdenv.mkDerivation rec {
+    name = "${pname}-assets-${version}";
+    version = "2.0.0.7";
+
+    src = requireFile rec {
+      name = "setup_descent12_${version}.exe";
+      sha256 = "1r1drbfda6czg21f9qqiiwgnkpszxgmcn5bafp5ljddh34swkn3f";
+      message = ''
+        While the Descent ${toString ver} game engine is free, the game assets are not.
+
+        Please purchase the game on gog.com and download the Windows installer.
+
+        Once you have downloaded the file, please use the following command and re-run the
+        installation:
+
+        nix-prefetch-url file://\$PWD/${name}
+      '';
+    };
+
+    nativeBuildInputs = [ gogUnpackHook ];
+
+    dontBuild = true;
+    dontFixup = true;
+
+    installPhase = ''
+      runHook preInstall
+
+      mkdir -p $out/share/{games/${pname},doc/${pname}/examples}
+      pushd "app/${source}"
+      mv dosbox*.conf $out/share/doc/${pname}/examples
+      mv *.txt *.pdf  $out/share/doc/${pname}
+      cp -r * $out/share/games/descent${toString ver}
+      popd
+
+      runHook postInstall
+    '';
+
+    meta = with stdenv.lib; {
+      description = "Descent ${toString ver} assets from GOG";
+      homepage    = http://www.dxx-rebirth.com/;
+      license     = licenses.unfree;
+      maintainers = with maintainers; [ peterhoeg ];
+      hydraPlatforms = [];
+    };
+  };
+
+in {
+  descent1-assets = generic 1 "descent";
+  descent2-assets = generic 2 "descent 2";
+}
diff --git a/pkgs/games/dxx-rebirth/full.nix b/pkgs/games/dxx-rebirth/full.nix
new file mode 100644
index 000000000000..baf8b80add10
--- /dev/null
+++ b/pkgs/games/dxx-rebirth/full.nix
@@ -0,0 +1,30 @@
+{ stdenv, makeWrapper
+, dxx-rebirth, descent1-assets, descent2-assets }:
+
+let
+  generic = ver: assets: stdenv.mkDerivation rec {
+    name = "d${toString ver}x-rebirth-full-${assets.version}";
+
+    nativeBuildInputs = [ makeWrapper ];
+
+    buildCommand = ''
+      mkdir -p $out/bin
+
+      makeWrapper ${dxx-rebirth}/bin/d${toString ver}x-rebirth $out/bin/descent${toString ver} \
+        --add-flags "-hogdir ${assets}/share/games/descent${toString ver}"
+    '';
+
+    meta = with stdenv.lib; {
+      description = "Descent ${toString ver} using the DXX-Rebirth project engine and game assets from GOG";
+      homepage    = http://www.dxx-rebirth.com/;
+      license     = with licenses; [ free unfree ];
+      maintainers = with maintainers; [ peterhoeg ];
+      platforms   = with platforms; linux;
+      hydraPlatforms = [];
+    };
+  };
+
+in {
+  d1x-rebirth-full = generic 1 descent1-assets;
+  d2x-rebirth-full = generic 2 descent2-assets;
+}
diff --git a/pkgs/games/factorio/default.nix b/pkgs/games/factorio/default.nix
index ac04022a4629..6a5cea0634da 100644
--- a/pkgs/games/factorio/default.nix
+++ b/pkgs/games/factorio/default.nix
@@ -4,6 +4,7 @@
 , releaseType
 , mods ? []
 , username ? "" , password ? ""
+, experimental ? false
 }:
 
 assert releaseType == "alpha"
@@ -14,19 +15,38 @@ let
 
   # NB If you nix-prefetch-url any of these, be sure to add a --name arg,
   #    where the ultimate "_" (before the version) is changed to a "-".
+  branch = if experimental then "experimental" else "stable";
   binDists = {
     x86_64-linux = let bdist = bdistForArch { inUrl = "linux64"; inTar = "x64"; }; in {
-      alpha    = bdist { sha256 = "1i25q8x80qdpmf00lvml67gyklrfvmr4gfyakrx954bq8giiy4ll"; fetcher = authenticatedFetch; };
-      headless = bdist { sha256 = "0v5sypz1q6x6hi6k5cyi06f9ld0cky80l0z64psd3v2ax9hyyh8h"; };
-      demo     = bdist { sha256 = "0aca8gks7wl7yi821bcca16c94zcc41agin5j0vfz500i0sngzzw"; version = "0.15.36"; };
+      alpha = {
+        stable        = bdist { sha256 = "1i25q8x80qdpmf00lvml67gyklrfvmr4gfyakrx954bq8giiy4ll"; fetcher = authenticatedFetch; };
+        experimental  = bdist { sha256 = "0s7cn5xhzwn793bmvlhlmibhbxdpfmpnpn33k5a4hdprc5gc27rg"; version = "0.16.24"; fetcher = authenticatedFetch; };
+      };
+      headless = {
+        stable        = bdist { sha256 = "0v5sypz1q6x6hi6k5cyi06f9ld0cky80l0z64psd3v2ax9hyyh8h"; };
+        experimental  = bdist { sha256 = "1ff4yjybiqr5kw583hmxkbrbxa3haj4bkjj8sx811c3s269gspi2"; version = "0.16.24"; };
+      };
+      demo = {
+        stable        = bdist { sha256 = "0aca8gks7wl7yi821bcca16c94zcc41agin5j0vfz500i0sngzzw"; version = "0.15.36"; };
+        experimental  = bdist { };
+      };
     };
     i686-linux = let bdist = bdistForArch { inUrl = "linux32"; inTar = "i386"; }; in {
-      alpha    = bdist { sha256 = "0nnfkxxqnywx1z05xnndgh71gp4izmwdk026nnjih74m2k5j086l"; version = "0.14.23"; nameMut = asGz; };
-      headless = bdist { };
-      demo     = bdist { };
+      alpha = {
+        stable        = bdist { sha256 = "0nnfkxxqnywx1z05xnndgh71gp4izmwdk026nnjih74m2k5j086l"; version = "0.14.23"; nameMut = asGz; };
+        experimental  = bdist { };
+      };
+      headless = {
+        stable        = bdist { };
+        experimental  = bdist { };
+      };
+      demo = {
+        stable        = bdist { };
+        experimental  = bdist { };
+      };
     };
   };
-  actual = binDists.${stdenv.system}.${releaseType} or (throw "Factorio: unsupported platform");
+  actual = binDists.${stdenv.system}.${releaseType}.${branch} or (throw "Factorio: unsupported platform");
 
   bdistForArch = arch: { sha256 ? null
                        , version ? "0.15.40"
diff --git a/pkgs/games/garden-of-coloured-lights/default.nix b/pkgs/games/garden-of-coloured-lights/default.nix
index b8550b3712e3..066cadb13b17 100644
--- a/pkgs/games/garden-of-coloured-lights/default.nix
+++ b/pkgs/games/garden-of-coloured-lights/default.nix
@@ -20,7 +20,7 @@ stdenv.mkDerivation rec {
   meta = with stdenv.lib; {
     description = "Old-school vertical shoot-em-up / bullet hell";
     homepage = http://garden.sourceforge.net/drupal/;
-    maintainers = with maintainers; [ profpatsch ];
+    maintainers = with maintainers; [ Profpatsch ];
     license = licenses.gpl3;
   };
 
diff --git a/pkgs/games/mnemosyne/default.nix b/pkgs/games/mnemosyne/default.nix
index 02bd0ba78d18..a5b349334923 100644
--- a/pkgs/games/mnemosyne/default.nix
+++ b/pkgs/games/mnemosyne/default.nix
@@ -1,30 +1,40 @@
 { stdenv
 , fetchurl
-, pythonPackages
+, python
 }:
-let
-  version = "2.3.2";
-in pythonPackages.buildPythonApplication rec {
-  name = "mnemosyne-${version}";
+
+python.pkgs.buildPythonApplication rec {
+  pname = "mnemosyne";
+  version = "2.6";
+
   src = fetchurl {
-    url    = "http://sourceforge.net/projects/mnemosyne-proj/files/mnemosyne/${name}/Mnemosyne-${version}.tar.gz";
-    sha256 = "0jkrw45i4v24p6xyq94z7rz5948h7f5dspgs5mcdaslnlp2accfp";
+    url    = "mirror://sourceforge/project/mnemosyne-proj/mnemosyne/mnemosyne-${version}/Mnemosyne-${version}.tar.gz";
+    sha256 = "0b7b5sk5bfbsg5cyybkv5xw9zw257v3khsn0lwlbxnlhakd0rsg4";
   };
-  propagatedBuildInputs = with pythonPackages; [
-    pyqt4
+
+  propagatedBuildInputs = with python.pkgs; [
+    pyqt5
     matplotlib
     cherrypy
+    cheroot
     webob
+    pillow
   ];
-  preConfigure = ''
+
+  # No tests/ directrory in tarball
+  doCheck = false;
+
+  prePatch = ''
     substituteInPlace setup.py --replace /usr $out
     find . -type f -exec grep -H sys.exec_prefix {} ';' | cut -d: -f1 | xargs sed -i s,sys.exec_prefix,\"$out\",
   '';
+
   postInstall = ''
     mkdir -p $out/share
-    mv $out/lib/python2.7/site-packages/$out/share/locale $out/share
-    rm -r $out/lib/python2.7/site-packages/nix
+    mv $out/${python.sitePackages}/$out/share/locale $out/share
+    rm -r $out/${python.sitePackages}/nix
   '';
+
   meta = {
     homepage = https://mnemosyne-proj.org/;
     description = "Spaced-repetition software";
diff --git a/pkgs/games/multimc/default.nix b/pkgs/games/multimc/default.nix
index e438008b19c2..35444f82f66e 100644
--- a/pkgs/games/multimc/default.nix
+++ b/pkgs/games/multimc/default.nix
@@ -1,46 +1,24 @@
-{ stdenv, fetchFromGitHub, cmake, jdk, zlib, file, makeWrapper, xorg, libpulseaudio, qtbase, quazip }:
+{ stdenv, fetchFromGitHub, cmake, jdk, zlib, file, makeWrapper, xorg, libpulseaudio, qtbase }:
 
 let
-  libnbt = fetchFromGitHub {
-    owner = "MultiMC";
-    repo = "libnbtplusplus";
-    rev = "4b305bb";
-    sha256 = "1zj7pxk0g5zl16hrngb4rss00hi019rylin7zgf18kaymc54nbcs";
-  };
-in
-stdenv.mkDerivation {
-  name = "multimc-0.5.1";
+  libpath = with xorg; stdenv.lib.makeLibraryPath [ libX11 libXext libXcursor libXrandr libXxf86vm libpulseaudio ];
+in stdenv.mkDerivation rec {
+  name = "multimc-${version}";
+  version = "0.6.1";
   src = fetchFromGitHub {
     owner = "MultiMC";
     repo = "MultiMC5";
-    rev = "0.5.1";
-    sha256 = "0wmlnwcq3gxrbmc53j96aa64pp1kmnlxiifhzngcb5kfmbbc8a20";
+    rev = version;
+    sha256 = "0glsf4vfir8w24bpinf3cx2ninrcp7hpq9cl463wl78dvqfg47kx";
+    fetchSubmodules = true;
   };
-  buildInputs = [ cmake qtbase jdk zlib file makeWrapper ];
-
-  libpath = with xorg; [ libX11 libXext libXcursor libXrandr libXxf86vm libpulseaudio ];
-  postUnpack = ''
-    rmdir $sourceRoot/libraries/libnbtplusplus
-    cp -r ${libnbt} $sourceRoot/libraries/libnbtplusplus
-    chmod 755 -R $sourceRoot/libraries/libnbtplusplus
-    mkdir -pv $sourceRoot/build/
-    cp -v ${quazip.src} $sourceRoot/build/quazip-0.7.1.tar.gz
-  '';
+  nativeBuildInputs = [ cmake file makeWrapper ];
+  buildInputs = [ qtbase jdk zlib ];
 
   enableParallelBuilding = true;
 
-  # the install rule tries to bundle ALL deps into the output for portability
-  installPhase = ''
-    RESULT=/run/opengl-driver/lib/
-    for x in $libpath; do
-      RESULT=$x/lib/:$RESULT
-    done
-
-    mkdir -pv $out/bin/jars $out/lib
-    cp -v MultiMC $out/bin/
-    cp -v jars/*.jar $out/bin/jars/ #*/
-    cp -v libMultiMC_rainbow.so libMultiMC_nbt++.so libMultiMC_logic.so libMultiMC_gui.so $out/lib
-    wrapProgram $out/bin/MultiMC --add-flags "-d \$HOME/.multimc/" --set GAME_LIBRARY_PATH $RESULT --prefix PATH : ${jdk}/bin/
+  postInstall = ''
+    wrapProgram $out/bin/MultiMC --add-flags "-d \$HOME/.multimc/" --set GAME_LIBRARY_PATH /run/opengl-driver/lib:${libpath} --prefix PATH : ${jdk}/bin/
   '';
 
   meta = with stdenv.lib; {
diff --git a/pkgs/games/openra/default.nix b/pkgs/games/openra/default.nix
index 5665dfc9e945..c6aedcd172e3 100644
--- a/pkgs/games/openra/default.nix
+++ b/pkgs/games/openra/default.nix
@@ -5,7 +5,7 @@
 
 stdenv.mkDerivation rec {
   name = "openra-${version}";
-  version = "20171014";
+  version = "20180218";
 
   meta = with stdenv.lib; {
     description = "Real Time Strategy game engine recreating the C&C titles";
@@ -19,7 +19,7 @@ stdenv.mkDerivation rec {
     owner = "OpenRA";
     repo = "OpenRA";
     rev = "release-${version}";
-    sha256 = "0nlwpmiwhjs3qc2lxwnrh4p874v5y6mf4avi6bqgr1wvzc43n8wr";
+    sha256 = "1853p2q88602s3zf22wg1h2qx2x661n20bcjjbfmj0h2d4p9dmaf";
 
     extraPostFetch = ''
       sed -i 's,curl,curl --insecure,g' $out/thirdparty/{fetch-thirdparty-deps,noget}.sh
diff --git a/pkgs/games/openxcom/default.nix b/pkgs/games/openxcom/default.nix
index 65c2a42922b2..bf451af9ad73 100644
--- a/pkgs/games/openxcom/default.nix
+++ b/pkgs/games/openxcom/default.nix
@@ -1,22 +1,18 @@
-{stdenv, fetchurl, fetchpatch, cmake, mesa, zlib, openssl, libyamlcpp, boost
+{stdenv, fetchFromGitHub, fetchpatch, cmake, mesa, zlib, openssl, libyamlcpp, boost
 , SDL, SDL_image, SDL_mixer, SDL_gfx }:
 
-let version = "1.0.0"; in
+let version = "1.0.0.2018.01.28"; in
 stdenv.mkDerivation {
   name = "openxcom-${version}";
-  src = fetchurl {
-    url = http://openxcom.org/file/1726/;
-    sha256 = "1rmg10nklvf86ckbbssyvbg5cd4p7in5zq3mas2yyffdjk9i40v6";
-    name = "openxcom-${version}.tar.gz";
+  src = fetchFromGitHub {
+    owner = "SupSuper";
+    repo = "OpenXcom";
+    rev = "b148916268a6ce104c3b6b7eb4d9e0487cba5487";
+    sha256 = "1128ip3g4aw59f3f23mvlyhl8xckhwjjw9rd7wn7xv51hxdh191c";
   };
 
-  buildInputs = [ cmake mesa zlib openssl libyamlcpp boost
-    SDL SDL_image SDL_mixer SDL_gfx ];
-
-  patches = [ (fetchpatch {
-    url = "https://github.com/SupSuper/OpenXcom/commit/49bec0851fc6e5365cac0f71b2c40a80ddf95e77.patch";
-    sha256 = "156fk8wz4qc0nmqq3zjb6kw84qirabads2azr6xvlgb3lcn327v2";
-  }) ];
+  nativeBuildInputs = [ cmake ];
+  buildInputs = [ SDL SDL_gfx SDL_image SDL_mixer boost libyamlcpp mesa openssl zlib ];
 
   meta = {
     description = "Open source clone of UFO: Enemy Unknown";
diff --git a/pkgs/games/quakespasm/vulkan.nix b/pkgs/games/quakespasm/vulkan.nix
new file mode 100644
index 000000000000..675c2ab4b4d8
--- /dev/null
+++ b/pkgs/games/quakespasm/vulkan.nix
@@ -0,0 +1,47 @@
+{ stdenv, SDL2, fetchFromGitHub, makeWrapper, gzip, libvorbis, libmad, vulkan-loader }:
+stdenv.mkDerivation rec {
+  name = "vkquake-${version}";
+  majorVersion = "0.97";
+  version = "${majorVersion}.3";
+
+  src = fetchFromGitHub {
+    owner = "Novum";
+    repo = "vkQuake";
+    rev = version;
+    sha256 = "11z9k5aw9ip7ggmgjdnaq4g45pxqiy0xhd4jqqmgzpmfdbjk4x13";
+  };
+
+  sourceRoot = "source/Quake";
+  
+  buildInputs = [
+    makeWrapper gzip SDL2 libvorbis libmad vulkan-loader.dev
+  ];
+
+  preInstall = ''
+    mkdir -p "$out/bin"
+  '';
+
+  makeFlags = [ "prefix=$(out) bindir=$(out)/bin" ];
+
+  postFixup = ''
+    wrapProgram $out/bin/vkquake --prefix LD_LIBRARY_PATH : ${vulkan-loader}/lib
+  '';
+
+  enableParallelBuilding = true;
+  
+  meta = {
+    description = "Vulkan Quake port based on QuakeSpasm";
+    homepage = src.meta.homepage;
+    longDescription = ''
+      vkQuake is a Quake 1 port using Vulkan instead of OpenGL for rendering.
+      It is based on the popular QuakeSpasm port and runs all mods compatible with it
+      like Arcane Dimensions or In The Shadows. vkQuake also serves as a Vulkan demo
+      application that shows basic usage of the API. For example it demonstrates render
+      passes & sub passes, pipeline barriers & synchronization, compute shaders, push &
+      specialization constants, CPU/GPU parallelism and memory pooling.
+    '';
+  
+    platforms = stdenv.lib.platforms.linux;
+    maintainers = [ stdenv.lib.maintainers.gnidorah ];
+  };
+}
diff --git a/pkgs/games/rogue/default.nix b/pkgs/games/rogue/default.nix
index b246a94715e4..05fd9ab523b6 100644
--- a/pkgs/games/rogue/default.nix
+++ b/pkgs/games/rogue/default.nix
@@ -5,7 +5,7 @@ stdenv.mkDerivation {
 
   src = fetchurl {
     urls = [
-      "http://pkgs.fedoraproject.org/repo/pkgs/rogue/rogue5.4.4-src.tar.gz/033288f46444b06814c81ea69d96e075/rogue5.4.4-src.tar.gz"
+      "http://src.fedoraproject.org/repo/pkgs/rogue/rogue5.4.4-src.tar.gz/033288f46444b06814c81ea69d96e075/rogue5.4.4-src.tar.gz"
       "http://ftp.vim.org/ftp/pub/ftp/os/Linux/distr/slitaz/sources/packages-cooking/r/rogue5.4.4-src.tar.gz"
       "http://rogue.rogueforge.net/files/rogue5.4/rogue5.4.4-src.tar.gz"
     ];
diff --git a/pkgs/games/ultrastardx/default.nix b/pkgs/games/ultrastardx/default.nix
index ce68f190992b..67991987c311 100644
--- a/pkgs/games/ultrastardx/default.nix
+++ b/pkgs/games/ultrastardx/default.nix
@@ -42,6 +42,6 @@ in stdenv.mkDerivation rec {
     homepage = http://ultrastardx.sourceforge.net/;
     description = "Free and open source karaoke game";
     license = licenses.gpl2Plus;
-    maintainers = with maintainers; [ profpatsch ];
+    maintainers = with maintainers; [ Profpatsch ];
   };
 }
diff --git a/pkgs/games/xjump/darwin.patch b/pkgs/games/xjump/darwin.patch
new file mode 100644
index 000000000000..8221677658e3
--- /dev/null
+++ b/pkgs/games/xjump/darwin.patch
@@ -0,0 +1,21 @@
+--- xjump/src/main.c	2018-02-20 09:15:15.608807657 +0100
++++ xjump-patched/src/main.c	2018-02-20 09:15:34.148949100 +0100
+@@ -604,18 +604,6 @@
+    * optimistic privilege dropping function. */
+   setgroups(0, NULL);
+ 
+-  if (setresgid(-1, realgid, realgid) != 0) {
+-    perror("Could not drop setgid privileges.  Aborting.");
+-    exit(1);
+-  }
+-
+-  /* Dropping user privileges must come last.
+-   * Otherwise we won't be able to drop group privileges anymore */
+-  if (setresuid(-1, realuid, realuid) != 0) {
+-    perror("Could not drop setuid privileges.  Aborting.");
+-    exit(1);
+-  }
+-
+   /* From now on we run with regular user privileges */
+ 
+   static XtActionsRec a_table[] = {
diff --git a/pkgs/games/xjump/default.nix b/pkgs/games/xjump/default.nix
new file mode 100644
index 000000000000..df9ff30f2101
--- /dev/null
+++ b/pkgs/games/xjump/default.nix
@@ -0,0 +1,27 @@
+{ stdenv, buildPlatform, fetchFromGitHub, autoconf, automake, libX11, libXt, libXpm, libXaw, localStateDir?null }:
+
+stdenv.mkDerivation rec {
+  name = "xjump-${version}";
+  version = "2.9.3";
+  src = fetchFromGitHub {
+    owner = "hugomg";
+    repo = "xjump";
+    rev = "e7f20fb8c2c456bed70abb046c1a966462192b80";
+    sha256 = "0hq4739cvi5a47pxdc0wwkj2lmlqbf1xigq0v85qs5bq3ixmq2f7";
+  };
+  nativeBuildInputs = [ autoconf automake ];
+  buildInputs = [ libX11 libXt libXpm libXaw ];
+  preConfigure = "autoreconf --install";
+  patches = if buildPlatform.isDarwin then [ ./darwin.patch ] else [];
+  configureFlags =
+    if localStateDir != null then
+      ["--localstatedir=${localStateDir}"]
+    else
+      [];
+
+  meta = with stdenv.lib; {
+    description = "The falling tower game";
+    license = licenses.gpl2;
+    maintainers = with maintainers; [ pmeunier ];
+  };
+}
diff --git a/pkgs/games/zdoom/bcc-git.nix b/pkgs/games/zdoom/bcc-git.nix
new file mode 100644
index 000000000000..2a1219e66ea0
--- /dev/null
+++ b/pkgs/games/zdoom/bcc-git.nix
@@ -0,0 +1,31 @@
+{ stdenv, fetchFromGitHub }:
+
+stdenv.mkDerivation {
+  name = "doom-bcc-git-0.8.0.2018.01.04";
+
+  src = fetchFromGitHub {
+    owner = "wormt";
+    repo = "bcc";
+    rev = "d58b44d9f18b28fd732c27113e5607a454506d19";
+    sha256 = "1m83ip40ln61qrvb1fbgaqbld2xip9n3k817lwkk1936pml9zcrq";
+  };
+
+  enableParallelBuilding = true;
+  makeFlags = ["CC=cc"];
+
+  patches = [ ./bcc-warning-fix.patch ];
+
+  installPhase = ''
+    mkdir -p $out/{bin,lib,share/doc}
+    install -m755 bcc $out/bin/bcc
+    cp -av doc $out/share/doc/bcc
+    cp -av lib $out/lib/bcc
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Compiler for Doom/Hexen scripts (ACS, BCS)";
+    homepage = https://github.com/wormt/bcc;
+    license = licenses.mit;
+    maintainers = with maintainers; [ertes];
+  };
+}
diff --git a/pkgs/games/zdoom/bcc-warning-fix.patch b/pkgs/games/zdoom/bcc-warning-fix.patch
new file mode 100644
index 000000000000..4a352cb1e471
--- /dev/null
+++ b/pkgs/games/zdoom/bcc-warning-fix.patch
@@ -0,0 +1,25 @@
+From c6ac05c96b7908ccd35f3908fc0f13650b0583c0 Mon Sep 17 00:00:00 2001
+From: =?UTF-8?q?Ertugrul=20S=C3=B6ylemez?= <esz@posteo.de>
+Date: Sat, 3 Feb 2018 17:08:54 +0100
+Subject: [PATCH] Remove -Werror
+
+---
+ Makefile | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/Makefile b/Makefile
+index bbe2c75..3357d2d 100644
+--- a/Makefile
++++ b/Makefile
+@@ -4,7 +4,7 @@ EXE=bcc
+ BUILD_DIR=build
+ CC=gcc
+ INCLUDE=-Isrc -I src/parse
+-OPTIONS=-Wall -Werror -Wno-unused -std=c99 -pedantic -Wstrict-aliasing \
++OPTIONS=-Wall -Wno-unused -std=c99 -pedantic -Wstrict-aliasing \
+ 	-Wstrict-aliasing=2 -Wmissing-field-initializers -D_BSD_SOURCE \
+ 	-D_DEFAULT_SOURCE $(INCLUDE)
+ VERSION_FILE=$(BUILD_DIR)/version.c
+-- 
+2.15.1
+
diff --git a/pkgs/misc/apulse/default.nix b/pkgs/misc/apulse/default.nix
index 4b2323eaa716..343dbecb22c0 100644
--- a/pkgs/misc/apulse/default.nix
+++ b/pkgs/misc/apulse/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "apulse-${version}";
-  version = "0.1.10";
+  version = "0.1.11";
 
   src = fetchFromGitHub {
     owner = "i-rinat";
     repo = "apulse";
     rev = "v${version}";
-    sha256 = "018gaxn647wz1vjbr49hfrch9svnv0d1nzijc8ckb4fsr8vv95a1";
+    sha256 = "16l278q0czca2794fj388ql6qn1zrw24a0p6k7bayrrf5h32fdzd";
   };
 
   enableParallelBuilding = true;
diff --git a/pkgs/misc/apulse/pressureaudio.nix b/pkgs/misc/apulse/pressureaudio.nix
new file mode 100644
index 000000000000..255fca842a73
--- /dev/null
+++ b/pkgs/misc/apulse/pressureaudio.nix
@@ -0,0 +1,82 @@
+{ stdenv, apulse, libpulseaudio, pkgconfig, intltool, autoreconfHook }:
+
+stdenv.mkDerivation {
+  name = "libpressureaudio-${apulse.version}";
+
+  src = libpulseaudio.src;
+
+  nativeBuildInputs = [ pkgconfig intltool autoreconfHook ];
+
+  configurePhase = ":";
+
+  buildPhase = ":";
+
+  installPhase = ''
+    echo "Copying libraries from apulse."
+    mkdir -p $out/lib
+    ls ${apulse}/lib/apulse $out/lib
+    cp -a ${apulse}/lib/apulse/* $out/lib/
+
+    echo "Copying headers from pulseaudio."
+    mkdir -p $out/include/pulse
+    cp -a src/pulse/*.h $out/include/pulse
+
+    echo "Generating custom pkgconfig definitions."
+    mkdir -p $out/lib/pkgconfig
+    for a in libpulse.pc libpulse-simple.pc libpulse-mainloop-glib.pc ; do
+        cat > $out/lib/pkgconfig/$a << EOF
+    prefix=$out
+    libdir=$out/lib
+    includedir=$out/include
+
+    EOF
+    done
+
+    cat >> $out/lib/pkgconfig/libpulse.pc << EOF
+    Name: libpulse
+    Description: PulseAudio Client Interface
+    Version: ${libpulseaudio.version}-rebootstrapped
+    Libs: -L$out/lib -lpulse 
+    Cflags: -I$out/include -D_REENTRANT
+    EOF
+
+    cat >> $out/lib/pkgconfig/libpulse-simple.pc << EOF
+    Name: libpulse-simple
+    Description: PulseAudio Simplified Synchronous Client Interface
+    Version: ${libpulseaudio.version}-rebootstrapped
+    Libs: -L$out/lib -lpulse-simple 
+    Cflags: -I$out/include -D_REENTRANT
+    Requires: libpulse
+    EOF
+
+    cat >> $out/lib/pkgconfig/libpulse-mainloop-glib.pc << EOF
+    Name: libpulse-mainloop-glib
+    Description: PulseAudio GLib 2.0 Main Loop Wrapper
+    Version: ${libpulseaudio.version}-rebootstrapped
+    Libs: -L$out/lib -lpulse-mainloop-glib 
+    Cflags: -I$out/include -D_REENTRANT
+    Requires: libpulse glib-2.0
+    EOF
+  '';
+
+  meta = apulse.meta // {
+    description = "libpulseaudio without any sound daemons over pure ALSA";
+    longDescription = ''
+      apulse (${apulse.meta.homepage}) implements most of libpulseaudio
+      API over pure ALSA in 5% LOC of the original PulseAudio.
+
+      But apulse is made to be used as a wrapper that substitutes its
+      replacement libs into LD_LIBRARY_PATH. The problem with that is
+      that you still have to link against the original libpulseaudio.
+
+      pressureaudio (http://git.r-36.net/pressureaudio/) wraps apulse
+      with everything you need to replace libpulseaudio completely.
+
+      This derivation is a reimplementation of pressureaudio in pure
+      nix.
+
+      You can simply override libpulseaudio with this and most
+      packages would just work.
+    '';
+  };
+}
diff --git a/pkgs/misc/cups/drivers/kyocera/default.nix b/pkgs/misc/cups/drivers/kyocera/default.nix
index 17e5b37ed440..db787021ce03 100644
--- a/pkgs/misc/cups/drivers/kyocera/default.nix
+++ b/pkgs/misc/cups/drivers/kyocera/default.nix
@@ -17,7 +17,7 @@ stdenv.mkDerivation rec {
   dontStrip = true;
 
   src = fetchzip {
-    # this side does not like curl -> override useragent
+    # this site does not like curl -> override useragent
     curlOpts = "-A ''";
     url = "http://cdn.kyostatics.net/dlc/ru/driver/all/linuxdrv_1_1203_fs-1x2xmfp.-downloadcenteritem-Single-File.downloadcenteritem.tmp/LinuxDrv_1.1203_FS-1x2xMFP.zip";
     sha256 = "0z1pbgidkibv4j21z0ys8cq1lafc6687syqa07qij2qd8zp15wiz";
diff --git a/pkgs/misc/cups/drivers/mfcl2720dwcupswrapper/default.nix b/pkgs/misc/cups/drivers/mfcl2720dwcupswrapper/default.nix
new file mode 100644
index 000000000000..d45b53b5b80b
--- /dev/null
+++ b/pkgs/misc/cups/drivers/mfcl2720dwcupswrapper/default.nix
@@ -0,0 +1,47 @@
+{ stdenv, fetchurl, dpkg, makeWrapper, coreutils, gnugrep, gnused, perl, mfcl2720dwlpr }:
+
+stdenv.mkDerivation rec {
+  name = "mfcl2720dwcupswrapper-${version}";
+  version = "3.2.0-1";
+
+  src = fetchurl {
+    url = "http://download.brother.com/welcome/dlf101802/${name}.i386.deb";
+    sha256 = "6d131926ce22c51b1854d2b91e426cc7ecbf5d6dabd698ef51a417090e35c598";
+  };
+
+  nativeBuildInputs = [ dpkg makeWrapper ];
+
+  phases = [ "installPhase" ];
+
+  installPhase = ''
+    dpkg-deb -x $src $out
+
+    basedir=${mfcl2720dwlpr}/opt/brother/Printers/MFCL2720DW
+    dir=$out/opt/brother/Printers/MFCL2720DW
+
+    substituteInPlace $dir/cupswrapper/brother_lpdwrapper_MFCL2720DW \
+      --replace /usr/bin/perl ${perl}/bin/perl \
+      --replace "basedir =~" "basedir = \"$basedir\"; #" \
+      --replace "PRINTER =~" "PRINTER = \"MFCL2720DW\"; #"
+
+    substituteInPlace $dir/cupswrapper/paperconfigml1 \
+      --replace /usr/bin/perl ${perl}/bin/perl
+
+    wrapProgram $dir/cupswrapper/brother_lpdwrapper_MFCL2720DW \
+      --prefix PATH : ${stdenv.lib.makeBinPath [ coreutils gnugrep gnused ]}
+
+    mkdir -p $out/lib/cups/filter
+    mkdir -p $out/share/cups/model
+
+    ln $dir/cupswrapper/brother_lpdwrapper_MFCL2720DW $out/lib/cups/filter
+    ln $dir/cupswrapper/brother-MFCL2720DW-cups-en.ppd $out/share/cups/model
+  '';
+
+  meta = {
+    description = "Brother MFC-L2720DW CUPS wrapper driver";
+    homepage = http://www.brother.com/;
+    license = stdenv.lib.licenses.gpl2;
+    platforms = [ "x86_64-linux" "i686-linux" ];
+    maintainers = [ stdenv.lib.maintainers.xeji ];
+  };
+}
diff --git a/pkgs/misc/cups/drivers/mfcl2720dwlpr/default.nix b/pkgs/misc/cups/drivers/mfcl2720dwlpr/default.nix
new file mode 100644
index 000000000000..7791d71114b4
--- /dev/null
+++ b/pkgs/misc/cups/drivers/mfcl2720dwlpr/default.nix
@@ -0,0 +1,45 @@
+{ pkgs, stdenv, fetchurl, dpkg, makeWrapper, coreutils, ghostscript, gnugrep, gnused, which, perl }:
+
+stdenv.mkDerivation rec {
+  name = "mfcl2720dwlpr-${version}";
+  version = "3.2.0-1";
+
+  src = fetchurl {
+    url = "http://download.brother.com/welcome/dlf101801/${name}.i386.deb";
+    sha256 = "088217e9ad118ec1e7f3d3f8f60f3bd839fe2c7d7c1136b249e9ac648dc742af";
+  };
+
+  nativeBuildInputs = [ dpkg makeWrapper ];
+
+  phases = [ "installPhase" ];
+
+  installPhase = ''
+    dpkg-deb -x $src $out
+
+    dir=$out/opt/brother/Printers/MFCL2720DW
+
+    substituteInPlace $dir/lpd/filter_MFCL2720DW \
+      --replace /usr/bin/perl ${perl}/bin/perl \
+      --replace "BR_PRT_PATH =~" "BR_PRT_PATH = \"$dir\"; #" \
+      --replace "PRINTER =~" "PRINTER = \"MFCL2720DW\"; #"
+
+    wrapProgram $dir/lpd/filter_MFCL2720DW \
+      --prefix PATH : ${stdenv.lib.makeBinPath [
+        coreutils ghostscript gnugrep gnused which
+      ]}
+
+    # need to use i686 glibc here, these are 32bit proprietary binaries
+    interpreter=${pkgs.pkgsi686Linux.glibc}/lib/ld-linux.so.2
+    patchelf --set-interpreter "$interpreter" $dir/inf/braddprinter
+    patchelf --set-interpreter "$interpreter" $dir/lpd/brprintconflsr3
+    patchelf --set-interpreter "$interpreter" $dir/lpd/rawtobr3
+  '';
+
+  meta = {
+    description = "Brother MFC-L2720DW lpr driver";
+    homepage = http://www.brother.com/;
+    license = stdenv.lib.licenses.unfree;
+    platforms = [ "x86_64-linux" "i686-linux" ];
+    maintainers = [ stdenv.lib.maintainers.xeji ];
+  };
+}
diff --git a/pkgs/misc/drivers/foo2zjs/default.nix b/pkgs/misc/drivers/foo2zjs/default.nix
index bfc8271ad659..8e24cf53c2f0 100644
--- a/pkgs/misc/drivers/foo2zjs/default.nix
+++ b/pkgs/misc/drivers/foo2zjs/default.nix
@@ -1,11 +1,11 @@
 { stdenv, fetchurl, foomatic-filters, bc, unzip, ghostscript, systemd, vim }:
 
 stdenv.mkDerivation rec {
-  name = "foo2zjs-20110210";
+  name = "foo2zjs-20171202";
 
   src = fetchurl {
     url = "http://www.loegria.net/mirrors/foo2zjs/${name}.tar.gz";
-    sha256 = "0vss8gdbbgxr694xw48rys2qflbnb4sp4gdb1v6z4m9ab97hs5yk";
+    sha256 = "b63c65e8e0e7c9fd8d19b9e63f7cd85048eba01a877aac1ca13a6bfc979ea182";
   };
 
   buildInputs = [ foomatic-filters bc unzip ghostscript systemd vim ];
diff --git a/pkgs/misc/emulators/atari++/default.nix b/pkgs/misc/emulators/atari++/default.nix
index d669233e7593..5a37b1b32c5b 100644
--- a/pkgs/misc/emulators/atari++/default.nix
+++ b/pkgs/misc/emulators/atari++/default.nix
@@ -1,16 +1,20 @@
-{ stdenv, fetchurl, libSM, libX11, SDL }:
+{ stdenv, fetchurl, libSM, libX11, libICE, SDL, alsaLib, gcc-unwrapped, libXext }:
 
 with stdenv.lib;
 stdenv.mkDerivation rec{
   name = "atari++-${version}";
-  version = "1.73";
+  version = "1.81";
 
   src = fetchurl {
     url = "http://www.xl-project.com/download/atari++_${version}.tar.gz";
-    sha256 = "1y5kwh08717jsa5agxrvxnggnwxq36irrid9rzfhca1nnvp9a45l";
+    sha256 = "1sv268dsjddirhx47zaqgqiahy6zjxj7xaiiksd1gjvs4lvf3cdg";
   };
 
-  buildInputs = [ libSM libX11 SDL ];
+  buildInputs = [ libSM libX11 SDL libICE alsaLib gcc-unwrapped libXext ];
+
+  postFixup = ''
+    patchelf --set-rpath ${stdenv.lib.makeLibraryPath buildInputs} "$out/bin/atari++"
+  '';
 
   meta = {
     homepage = http://www.xl-project.com/;
diff --git a/pkgs/misc/riscv-pk/default.nix b/pkgs/misc/riscv-pk/default.nix
new file mode 100644
index 000000000000..b605b9715d48
--- /dev/null
+++ b/pkgs/misc/riscv-pk/default.nix
@@ -0,0 +1,41 @@
+{ stdenv, fetchFromGitHub, autoreconfHook, payload ? null }: let
+  rev = "e5846a2bc707eaa58dc8ab6a8d20a090c6ee8570";
+  sha256 = "1clynpp70fnbgsjgxx7xi0vrdrj1v0h8zpv0x26i324kp2gwylf4";
+  revCount = "438";
+  shortRev = "e5846a2";
+in stdenv.mkDerivation {
+  name = "riscv-pk-0.1pre${revCount}_${shortRev}";
+
+  src = fetchFromGitHub {
+    owner = "riscv";
+    repo = "riscv-pk";
+    inherit rev sha256;
+  };
+
+  nativeBuildInputs = [ autoreconfHook ];
+
+  preConfigure = ''
+    mkdir build
+    cd build
+  '';
+
+  configureScript = "../configure";
+
+  configureFlags = stdenv.lib.optional (payload != null)
+    "--with-payload=${payload}";
+
+  hardeningDisable = [ "all" ];
+
+  postInstall = ''
+    mv $out/* $out/.cleanup
+    mv $out/.cleanup/* $out
+    rmdir $out/.cleanup
+  '';
+
+  meta = {
+    description = "RISC-V Proxy Kernel and Bootloader.";
+    homepage = https://github.com/riscv/riscv-pk;
+    license = stdenv.lib.licenses.bsd3;
+    maintainers = [ stdenv.lib.maintainers.shlevy ];
+  };
+}
diff --git a/pkgs/misc/vim-plugins/default.nix b/pkgs/misc/vim-plugins/default.nix
index d041d6de4f6f..7cf6e6b596ed 100644
--- a/pkgs/misc/vim-plugins/default.nix
+++ b/pkgs/misc/vim-plugins/default.nix
@@ -52,6 +52,7 @@ rec {
   # aliasess
   "sourcemap.vim"     = sourcemap;
   Colour_Sampler_Pack = Colour-Sampler-Pack;
+  Gundo               = gundo-vim; # backwards compat, added 2015-10-03
   YouCompleteMe       = youcompleteme;
   airline             = vim-airline;
   alternative         = a-vim; # backwards compat, added 2014-10-21
@@ -61,30 +62,41 @@ rec {
   colors-solarized    = Solarized;
   colorsamplerpack    = Colour_Sampler_Pack;
   command_T           = command-t; # backwards compat, added 2014-10-18
+  committia           = committia-vim-git;
+  concealedyank       = concealedyank-vim;
+  context-filetype    = context_filetype-vim;
   css_color_5056      = vim-css-color;
   ctrlp               = ctrlp-vim;
+  cute-python         = vim-cute-python-git;
+  denite              = denite-nvim;
   easy-align          = vim-easy-align;
   easymotion          = vim-easymotion;
+  echodoc             = echodoc-vim;
   eighties            = vim-eighties;
   ghc-mod-vim         = ghcmod;
   gist-vim            = Gist;
   gitgutter           = vim-gitgutter;
   gundo               = gundo-vim;
-  Gundo               = gundo-vim; # backwards compat, added 2015-10-03
   haskellConceal      = haskellconceal; # backwards compat, added 2014-10-18
-  haskellconceal      = vim-haskellconceal;
   haskellConcealPlus  = vim-haskellConcealPlus;
+  haskellconceal      = vim-haskellconceal;
   hier                = vim-hier;
   hlint-refactor      = hlint-refactor-vim;
   hoogle              = Hoogle;
   ipython             = vim-ipython;
   latex-live-preview  = vim-latex-live-preview;
+  mayansmoke          = mayansmoke-git;
   multiple-cursors    = vim-multiple-cursors;
   necoGhc             = neco-ghc; # backwards compat, added 2014-10-18
   neocomplete         = neocomplete-vim;
+  neoinclude          = neoinclude-vim;
+  neomru              = neomru-vim;
   neosnippet          = neosnippet-vim;
+  neoyank             = neoyank-vim-git;
   nerdcommenter       = The_NERD_Commenter;
   nerdtree            = The_NERD_tree;
+  open-browser        = open-browser-vim;
+  peskcolor           = peskcolor-vim-git;
   polyglot            = vim-polyglot;
   quickrun            = vim-quickrun;
   repeat              = vim-repeat;
@@ -94,6 +106,7 @@ rec {
   stylishHaskell      = stylish-haskell; # backwards compat, added 2014-10-18
   supertab            = Supertab;
   syntastic           = Syntastic;
+  tabpagebuffer       = tabpagebuffer-vim;
   tabular             = Tabular;
   tagbar              = Tagbar;
   thumbnail           = thumbnail-vim;
@@ -101,6 +114,8 @@ rec {
   tmuxNavigator       = tmux-navigator; # backwards compat, added 2014-10-18
   tslime              = tslime-vim;
   unite               = unite-vim;
+  vim-grepper         = vim-grepper-git;
+  vim-test            = vim-test-git;
   vimproc             = vimproc-vim;
   vimshell            = vimshell-vim;
   watchdogs           = vim-watchdogs;
@@ -127,17 +142,6 @@ rec {
 
   # --- generated packages bellow this line ---
 
-  Auto_Pairs = buildVimPluginFrom2Nix { # created by nix#NixDerivation
-    name = "Auto_Pairs-2017-07-03";
-    src = fetchgit {
-      url = "git://github.com/jiangmiao/auto-pairs";
-      rev = "f0019fc6423e7ce7bbd01d196a7e027077687fda";
-      sha256 = "1kzrdq3adwxwm3fw65g05ww9405lwqi368win5kayamyj9i0z7r6";
-    };
-    dependencies = [];
-
-  };
-
   CSApprox = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "CSApprox-2013-07-26";
     src = fetchgit {
@@ -553,6 +557,17 @@ rec {
 
   };
 
+  peskcolor-vim-git = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "peskcolor-vim-git-2016-06-11";
+    src = fetchgit {
+      url = "https://github.com/andsild/peskcolor.vim.git";
+      rev = "cba4fc739bbebacd503158f6509d9c226651f363";
+      sha256 = "15hw3casr5y3ckgcn6aq8vhk6g2hym41w51nvgf34hbj9fx1nvkq";
+    };
+    dependencies = [];
+
+  };
+
   flake8-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "flake8-vim-2017-02-17";
     src = fetchgit {
@@ -586,6 +601,17 @@ rec {
 
   };
 
+  vim-bazel = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-bazel-2018-01-10";
+    src = fetchgit {
+      url = "https://github.com/bazelbuild/vim-bazel";
+      rev = "ecafb17d5d1d3756e5ac0bd9f4812a450b8c91a3";
+      sha256 = "0ixhx9ssfygjy2v2ss02w28rcjxnvhj0caffj32cv3snwnpcz6fy";
+    };
+    dependencies = ["maktaba"];
+
+  };
+
   clighter8 = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "clighter8-2017-11-30";
     src = fetchgit {
@@ -633,6 +659,50 @@ rec {
 
   };
 
+  vim-toml = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-toml-2017-12-10";
+    src = fetchgit {
+      url = "https://github.com/cespare/vim-toml";
+      rev = "b531aac0d45aaa373070c4cc30d7ead91960f5a7";
+      sha256 = "14g3zvyfvhilr5ka3jhja4jxjn99957sk6hlv13yfkg349f57dvg";
+    };
+    dependencies = [];
+
+  };
+
+  denite-extra = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "denite-extra-2017-11-03";
+    src = fetchgit {
+      url = "https://github.com/chemzqm/denite-extra";
+      rev = "2cea3e857b51fcde425339adeec12854e6cecbb6";
+      sha256 = "1qa0ajs6vix0vvm1z7rhxq9bfx4aggq97gxghrxpvsc059c7w9wv";
+    };
+    dependencies = [];
+
+  };
+
+  denite-git = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "denite-git-2017-11-02";
+    src = fetchgit {
+      url = "https://github.com/chemzqm/denite-git";
+      rev = "d40026c9b2c0e53ecdd3883d26260f19c74c7dfe";
+      sha256 = "0c9602pj67hqfkyvanz5gw1s6vlf8q7s9r55g4dws5aakvjbqc0g";
+    };
+    dependencies = [];
+
+  };
+
+  concealedyank-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "concealedyank-vim-2013-03-24";
+    src = fetchgit {
+      url = "https://github.com/chikatoike/concealedyank.vim";
+      rev = "e7e65a395e0e6a266f3a808bc07441aa7d03ebbd";
+      sha256 = "0z7i8dmwfjh6mcrmgrxv3j86ic867617fas9mv4gqsrhhvrrkzsb";
+    };
+    dependencies = [];
+
+  };
+
   vim-sort-motion = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "vim-sort-motion-2017-10-03";
     src = fetchgit {
@@ -765,6 +835,17 @@ rec {
 
   };
 
+  vim-cute-python-git = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-cute-python-git-2016-04-04";
+    src = fetchgit {
+      url = "https://github.com/ehamberg/vim-cute-python.git";
+      rev = "d7a6163f794500447242df2bedbe20bd751b92da";
+      sha256 = "1jrfd6z84cdzn3yxdfp0xfxygscq7s8kbzxk37hf9cf5pl9ln0qf";
+    };
+    dependencies = [];
+
+  };
+
   acp = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "acp-2013-02-05";
     src = fetchgit {
@@ -798,12 +879,23 @@ rec {
 
   };
 
+  vim-json = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-json-2018-01-10";
+    src = fetchgit {
+      url = "https://github.com/elzr/vim-json";
+      rev = "3727f089410e23ae113be6222e8a08dd2613ecf2";
+      sha256 = "1c19pqrys45pzflj5jyrm4q6hcvs977lv6qsfvbnk7nm4skxrqp1";
+    };
+    dependencies = [];
+
+  };
+
   vim-localvimrc = buildVimPluginFrom2Nix { # created by nix#NixDerivation
-    name = "vim-localvimrc-2017-07-06";
+    name = "vim-localvimrc-2018-01-04";
     src = fetchgit {
       url = "https://github.com/embear/vim-localvimrc";
-      rev = "48c01c214ea0312e8045aaa1a28b30850e98a194";
-      sha256 = "158ajdg3n8j0cxk2ry8rmnpfvnzmznhl573v8ddw6xni58b7bg4d";
+      rev = "b915ce29c619fb367ed41d4c95d57eaaaed31b39";
+      sha256 = "13bc3davmw2pms663yniiha8bayzy1m08xjhyrnlqqb2dz77m5gy";
     };
     dependencies = [];
 
@@ -974,6 +1066,17 @@ rec {
 
   };
 
+  vim-gitbranch = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-gitbranch-2017-05-28";
+    src = fetchgit {
+      url = "https://github.com/itchyny/vim-gitbranch";
+      rev = "8118dc1cdd387bd609852be4bf350360ce881193";
+      sha256 = "01gvd96mnzfc5s0951zzq122birg5svnximkldgb9kv5bmsnmh3j";
+    };
+    dependencies = [];
+
+  };
+
   vim-ipython = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "vim-ipython-2015-06-23";
     src = fetchgit {
@@ -985,6 +1088,17 @@ rec {
 
   };
 
+  vim-test-git = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-test-git-2018-01-16";
+    src = fetchgit {
+      url = "https://github.com/janko-m/vim-test.git";
+      rev = "731ad6942f9449d2ed22f6d9ccc8d1ce613b1f19";
+      sha256 = "14xwsc23zmkfl6ydvqiqf7l0gn5nxqdm62rvgiky5j5ii9iqj3hr";
+    };
+    dependencies = [];
+
+  };
+
   vim-hier = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "vim-hier-2011-08-27";
     src = fetchgit {
@@ -1150,6 +1264,50 @@ rec {
 
   };
 
+  vim-niceblock = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-niceblock-2015-08-22";
+    src = fetchgit {
+      url = "https://github.com/kana/vim-niceblock";
+      rev = "03c59f648fcadd415fc91d7b100cf48bd0a55fac";
+      sha256 = "05p3xr61v3infi07r9ahr30190kamgdjxkjjlawbqnrn8pv9fws4";
+    };
+    dependencies = [];
+
+  };
+
+  vim-operator-replace = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-operator-replace-2015-02-25";
+    src = fetchgit {
+      url = "https://github.com/kana/vim-operator-replace";
+      rev = "1345a556a321a092716e149d4765a5e17c0e9f0f";
+      sha256 = "07cibp61zwbzpjfxqdc77fzrgnz8jhimmdhhyjr0lvgrjgvsnv6q";
+    };
+    dependencies = [];
+
+  };
+
+  vim-operator-user = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-operator-user-2015-02-17";
+    src = fetchgit {
+      url = "https://github.com/kana/vim-operator-user";
+      rev = "c3dfd41c1ed516b4b901c97562e644de62c367aa";
+      sha256 = "16y2fyrmwg4vkcl85i8xg8s6m39ca2jvgi9qm36b3vzbnkcifafb";
+    };
+    dependencies = [];
+
+  };
+
+  vim-textobj-user = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-textobj-user-2017-09-28";
+    src = fetchgit {
+      url = "https://github.com/kana/vim-textobj-user";
+      rev = "e231b65797b5765b3ee862d71077e9bd56f3ca3e";
+      sha256 = "0zsgr2cn8s42d7jllnxw2cvqkl27lc921d1mkph7ny7jgnghaay9";
+    };
+    dependencies = [];
+
+  };
+
   latex-box = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "latex-box-2015-06-01";
     src = fetchgit {
@@ -1297,12 +1455,23 @@ rec {
 
   };
 
+  vim-grepper-git = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-grepper-git-2018-01-16";
+    src = fetchgit {
+      url = "https://github.com/mhinz/vim-grepper.git";
+      rev = "4fd6260c56ffa0642095143f802d1cbfceb7437d";
+      sha256 = "11rhj6m85hxd4kf8yms4mab8553dcgl0yxm9r7nhdqpz6mljsir9";
+    };
+    dependencies = [];
+
+  };
+
   vim-startify = buildVimPluginFrom2Nix { # created by nix#NixDerivation
-    name = "vim-startify-2017-12-06";
+    name = "vim-startify-2017-12-20";
     src = fetchgit {
       url = "https://github.com/mhinz/vim-startify";
-      rev = "c905a0c9598c72cb4311ca88f3eb664d05e4d66b";
-      sha256 = "1zdqr2lg1cf7dix6yvx7hmxcb698hb2zdimiqv2kgpdqlc40agcy";
+      rev = "5e476d8e00da70bc33c54a174fd8cb18ed991868";
+      sha256 = "07k7ddjqc2jisk0sh9k8w6r5xhh47cbzbxdnbkjz7bdskkwsdsay";
     };
     dependencies = [];
 
@@ -1432,6 +1601,17 @@ rec {
 
   };
 
+  vim-textobj-multiblock = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-textobj-multiblock-2014-06-02";
+    src = fetchgit {
+      url = "https://github.com/osyo-manga/vim-textobj-multiblock";
+      rev = "670a5ba57d73fcd793f480e262617c6eb0103355";
+      sha256 = "1s71hdr73cl8yg9mrdflvzrdccpiv7qrlainai7gqw30r1hfhfzf";
+    };
+    dependencies = [];
+
+  };
+
   vim-watchdogs = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "vim-watchdogs-2017-12-03";
     src = fetchgit {
@@ -1487,6 +1667,28 @@ rec {
 
   };
 
+  vim-wordy = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-wordy-2016-11-07";
+    src = fetchgit {
+      url = "https://github.com/reedes/vim-wordy";
+      rev = "bd37684a041fce85c34bb56c41c5a12c04a376ca";
+      sha256 = "0lv3ff1yfqdz2vj6lwaygslds1ccidbb09f4x1cdwlawxdgh3w2v";
+    };
+    dependencies = [];
+
+  };
+
+  committia-vim-git = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "committia-vim-git-2017-12-04";
+    src = fetchgit {
+      url = "https://github.com/rhysd/committia.vim.git";
+      rev = "51aec02e5ab07c89fa5d5445cfe3a8e0098bec27";
+      sha256 = "08nqncgnmbvhnn850s6hhp6p6scqg2iiwrl9air952yh9pl91h84";
+    };
+    dependencies = [];
+
+  };
+
   vim-grammarous = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "vim-grammarous-2017-08-25";
     src = fetchgit {
@@ -1507,6 +1709,17 @@ rec {
     ];
   };
 
+  vim-operator-surround = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-operator-surround-2017-12-23";
+    src = fetchgit {
+      url = "https://github.com/rhysd/vim-operator-surround";
+      rev = "001c0da077b5b38a723151b19760d220e02363db";
+      sha256 = "0c6w6id57faw6sjf5wvw9qp2a4i7xj65q0c4hjs0spgzycv2wpkh";
+    };
+    dependencies = [];
+
+  };
+
   vim-puppet = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "vim-puppet-2017-08-25";
     src = fetchgit {
@@ -1595,6 +1808,50 @@ rec {
 
   };
 
+  context_filetype-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "context_filetype-vim-2017-11-15";
+    src = fetchgit {
+      url = "https://github.com/shougo/context_filetype.vim";
+      rev = "6856503cd938d018c2d42277ee6ca896fd63f5a2";
+      sha256 = "1s4nimpvc5ps602h8xb231nvmk9jbzs981an5kxr3idmmk44j5ms";
+    };
+    dependencies = [];
+
+  };
+
+  denite-nvim = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "denite-nvim-2018-01-16";
+    src = fetchgit {
+      url = "https://github.com/shougo/denite.nvim";
+      rev = "0d48d8d498d410a5ea4403648d528e7267d87461";
+      sha256 = "1npag0da8s3jv4jm8waqvsdfg0gnqhkc07r3m17zp2r2bh3b9bjc";
+    };
+    dependencies = [];
+
+  };
+
+  echodoc-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "echodoc-vim-2018-01-12";
+    src = fetchgit {
+      url = "https://github.com/shougo/echodoc.vim";
+      rev = "410ead5a9fa4400b51771cba3b7599722c9e65b1";
+      sha256 = "01czpvn5rs37x0ml8bc5vwyhklm6fk3wl339smc3jvyr1w73rrf5";
+    };
+    dependencies = [];
+
+  };
+
+  neco-syntax = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "neco-syntax-2017-10-01";
+    src = fetchgit {
+      url = "https://github.com/shougo/neco-syntax";
+      rev = "98cba4a98a4f44dcff80216d0b4aa6f41c2ce3e3";
+      sha256 = "1cjcbgx3h00g91ifgw30q5n97x4nprsr4kwirydws79fcs4vkgip";
+    };
+    dependencies = [];
+
+  };
+
   neco-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "neco-vim-2017-10-01";
     src = fetchgit {
@@ -1617,6 +1874,28 @@ rec {
 
   };
 
+  neoinclude-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "neoinclude-vim-2017-10-01";
+    src = fetchgit {
+      url = "https://github.com/shougo/neoinclude.vim";
+      rev = "b5956ac824fdd60d6eacaa597c8d329252972d8b";
+      sha256 = "07x7hxqhklcr5y8zkw9939cwx7rpiicjlc65bn526fkmhcc2hng6";
+    };
+    dependencies = [];
+
+  };
+
+  neomru-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "neomru-vim-2017-10-01";
+    src = fetchgit {
+      url = "https://github.com/shougo/neomru.vim";
+      rev = "97540f54fa20b94daf306f0c1f3cce983bbf7a1d";
+      sha256 = "15d5hmh5v3hnjnfb5736n45rh5nyq41vqjp1cz4ls2rxmmfi3xa7";
+    };
+    dependencies = [];
+
+  };
+
   neosnippet-snippets = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "neosnippet-snippets-2017-09-26";
     src = fetchgit {
@@ -1639,6 +1918,28 @@ rec {
 
   };
 
+  neoyank-vim-git = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "neoyank-vim-git-2017-12-19";
+    src = fetchgit {
+      url = "https://github.com/shougo/neoyank.vim.git";
+      rev = "5d6e6f80e1920fc38ab5cf779c424a1fdb49202d";
+      sha256 = "0l2gfwyiyzppb0hs9sx3x7ndq9zzinppzqq3njwjzd1qgfv29jpq";
+    };
+    dependencies = [];
+
+  };
+
+  tabpagebuffer-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "tabpagebuffer-vim-2014-09-30";
+    src = fetchgit {
+      url = "https://github.com/shougo/tabpagebuffer.vim";
+      rev = "4d95c3e6fa5ad887498f4cbe486c11e39d4a1fbc";
+      sha256 = "1z6zlpzkhwy1p2pmx9qrwb91dp9v4yi8jrdvm1if2k79ij4sl08f";
+    };
+    dependencies = [];
+
+  };
+
   unite-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "unite-vim-2017-12-06";
     src = fetchgit {
@@ -1701,6 +2002,17 @@ rec {
 
   };
 
+  vim-smalls = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-smalls-2015-05-02";
+    src = fetchgit {
+      url = "https://github.com/t9md/vim-smalls";
+      rev = "9619eae81626bd63f88165e0520c467698264e34";
+      sha256 = "0s5z3zv220cg95yky2av6w0jmpc56ysyhsx0596ksvgz5jwhpbad";
+    };
+    dependencies = [];
+
+  };
+
   vim-hardtime = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "vim-hardtime-2017-03-31";
     src = fetchgit {
@@ -1745,6 +2057,17 @@ rec {
 
   };
 
+  vim-themis = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-themis-2017-12-28";
+    src = fetchgit {
+      url = "https://github.com/thinca/vim-themis";
+      rev = "691cd3912ba318dbd8d9fa0035fee629b424766d";
+      sha256 = "1mrdaah3iyg35v6cgvr3jav3386czialfcinwa3y9jy14basbqhd";
+    };
+    dependencies = [];
+
+  };
+
   molokai = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "molokai-2015-11-11";
     src = fetchgit {
@@ -1833,6 +2156,17 @@ rec {
 
   };
 
+  open-browser-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "open-browser-vim-2017-12-15";
+    src = fetchgit {
+      url = "https://github.com/tyru/open-browser.vim";
+      rev = "ee8decb2b26020320128eecd7a96383d995c8804";
+      sha256 = "1a9j13h174lkp1gqd80idwdb8d74gdkyfgvb2l153jcqyvwpzcl2";
+    };
+    dependencies = [];
+
+  };
+
   youcompleteme = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "youcompleteme-2017-12-03";
     src = fetchgit {
@@ -1914,6 +2248,17 @@ rec {
 
   };
 
+  Improved-AnsiEsc = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "Improved-AnsiEsc-2015-08-25";
+    src = fetchgit {
+      url = "https://github.com/vim-scripts/Improved-AnsiEsc";
+      rev = "e1c59a8e9203fab6b9150721f30548916da73351";
+      sha256 = "1smjs4kz2kmzprzp9az4957675nakb43146hshbby39j5xz4jsbz";
+    };
+    dependencies = [];
+
+  };
+
   Rename = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "Rename-2011-08-30";
     src = fetchgit {
@@ -1980,6 +2325,17 @@ rec {
 
   };
 
+  mayansmoke-git = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "mayansmoke-git-2010-10-17";
+    src = fetchgit {
+      url = "https://github.com/vim-scripts/mayansmoke.git";
+      rev = "168883af7aec05f139af251f47eadd5dfb802c9d";
+      sha256 = "1xxcky7i6sx7f1q8xka4gd2xg78w6sqjvqrdwgrdzv93fhf82rpd";
+    };
+    dependencies = [];
+
+  };
+
   random-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "random-vim-2010-10-17";
     src = fetchgit {
@@ -2035,6 +2391,17 @@ rec {
     buildInputs = [ python ];
   };
 
+  targets-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "targets-vim-2017-12-03";
+    src = fetchgit {
+      url = "https://github.com/wellle/targets.vim";
+      rev = "6f809397526797f8f419a5d2b86d90e5aff68e66";
+      sha256 = "0djjm7b41kgrkz447br7qi3w96ayz9lyxd164gyp082qqxxpz63q";
+    };
+    dependencies = [];
+
+  };
+
   command-t = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "command-t-2017-11-16";
     src = fetchgit {
@@ -2760,6 +3127,28 @@ rec {
 
   };
 
+  vim-pencil = buildVimPluginFrom2Nix { # created by nix#NixDerivation
+    name = "vim-pencil-2017-06-14";
+    src = fetchgit {
+      url = "git://github.com/reedes/vim-pencil";
+      rev = "2dcd974b7255e4af83cf79a208f04a3489065e22";
+      sha256 = "0swc6sszj1f4h5hgi7z7j1xw54d69mg7f18rk2kf5y453qwg4jc0";
+    };
+    dependencies = [];
+
+  };
+
+  vim-rooter = buildVimPluginFrom2Nix {
+    name = "vim-rooter-2017-11-20";
+    src = fetchgit {
+      url = "git://github.com/airblade/vim-rooter";
+      rev = "3509dfb80d0076270a04049548738daeedf6dfb9";
+      sha256 = "03j26fw0dcvcc81fn8hx1prdwlgnd3g340pbxrzgbgxxq5kr0bwl";
+    };
+    dependencies = [];
+
+  };
+
   vim-ruby = buildVimPluginFrom2Nix { # created by nix#NixDerivation
     name = "vim-ruby-2017-06-22";
     src = fetchgit {
diff --git a/pkgs/misc/vim-plugins/vim-plugin-names b/pkgs/misc/vim-plugins/vim-plugin-names
index 661917c955be..04ccbb2a99d2 100644
--- a/pkgs/misc/vim-plugins/vim-plugin-names
+++ b/pkgs/misc/vim-plugins/vim-plugin-names
@@ -34,13 +34,19 @@
 "github:ajh17/Spacegray.vim"
 "github:albfan/nerdtree-git-plugin"
 "github:alvan/vim-closetag"
+"github:andsild/peskcolor.vim.git"
 "github:andviro/flake8-vim"
 "github:ap/vim-css-color"
 "github:autozimu/LanguageClient-neovim"
+"github:bazelbuild/vim-bazel"
 "github:bbchung/clighter8"
 "github:benekastah/neomake"
 "github:bitc/vim-hdevtools"
 "github:bronson/vim-trailing-whitespace"
+"github:cespare/vim-toml"
+"github:chemzqm/denite-extra"
+"github:chemzqm/denite-git"
+"github:chikatoike/concealedyank.vim"
 "github:christoomey/vim-sort-motion"
 "github:christoomey/vim-tmux-navigator"
 "github:ctjhoa/spacevim"
@@ -53,9 +59,11 @@
 "github:drmingdrmer/xptemplate"
 "github:eagletmt/neco-ghc"
 "github:editorconfig/editorconfig-vim"
+"github:ehamberg/vim-cute-python.git"
 "github:eikenb/acp"
 "github:elixir-lang/vim-elixir"
 "github:elmcast/elm-vim"
+"github:elzr/vim-json"
 "github:embear/vim-localvimrc"
 "github:enomsg/vim-haskellConcealPlus"
 "github:ensime/ensime-vim"
@@ -74,7 +82,9 @@
 "github:itchyny/calendar.vim"
 "github:itchyny/lightline.vim"
 "github:itchyny/thumbnail.vim"
+"github:itchyny/vim-gitbranch"
 "github:ivanov/vim-ipython"
+"github:janko-m/vim-test.git"
 "github:jceb/vim-hier"
 "github:jceb/vim-orgmode"
 "github:jeetsukumaran/vim-buffergator"
@@ -89,6 +99,9 @@
 "github:junegunn/limelight.vim"
 "github:junegunn/vim-peekaboo"
 "github:justincampbell/vim-eighties"
+"github:kana/vim-niceblock"
+"github:kana/vim-operator-replace"
+"github:kana/vim-operator-user"
 "github:latex-box-team/latex-box"
 "github:leafgarland/typescript-vim"
 "github:lepture/vim-jinja"
@@ -102,6 +115,7 @@
 "github:megaannum/forms"
 "github:megaannum/self"
 "github:mfukar/robotframework-vim"
+"github:mhinz/vim-grepper.git"
 "github:mhinz/vim-startify"
 "github:michaeljsmith/vim-indent-object"
 "github:mileszs/ack.vim"
@@ -113,33 +127,47 @@
 "github:neovimhaskell/haskell-vim"
 "github:nixprime/cpsm"
 "github:osyo-manga/shabadou.vim"
+"github:osyo-manga/vim-textobj-multiblock"
 "github:osyo-manga/vim-watchdogs"
 "github:plasticboy/vim-markdown"
 "github:python-mode/python-mode"
 "github:racer-rust/vim-racer"
 "github:raichoo/purescript-vim"
+"github:reedes/vim-wordy"
+"github:rhysd/committia.vim.git"
 "github:rhysd/vim-grammarous"
+"github:rhysd/vim-operator-surround"
 "github:rodjek/vim-puppet"
-"github:roxma/nvim-completion-manager"
 "github:roxma/nvim-cm-racer"
-"github:ryanoasis/vim-devicons"
+"github:roxma/nvim-completion-manager"
 "github:rust-lang/rust.vim"
+"github:ryanoasis/vim-devicons"
 "github:sbdchd/neoformat"
 "github:sebastianmarkow/deoplete-rust"
 "github:sheerun/vim-polyglot"
+"github:shougo/context_filetype.vim"
+"github:shougo/denite.nvim"
+"github:shougo/echodoc.vim"
+"github:shougo/neco-syntax"
 "github:shougo/neco-vim"
 "github:shougo/neocomplete.vim"
+"github:shougo/neoinclude.vim"
+"github:shougo/neomru.vim"
 "github:shougo/neosnippet-snippets"
 "github:shougo/neosnippet.vim"
+"github:shougo/neoyank.vim.git"
+"github:shougo/tabpagebuffer.vim"
 "github:shougo/unite.vim"
 "github:shougo/vimproc.vim"
 "github:shougo/vimshell.vim"
 "github:sjl/gundo.vim"
 "github:slashmili/alchemist.vim"
+"github:t9md/vim-smalls"
 "github:takac/vim-hardtime"
 "github:terryma/vim-expand-region"
 "github:tex/vimpreviewpandoc"
 "github:thinca/vim-quickrun"
+"github:thinca/vim-themis"
 "github:tomasr/molokai"
 "github:tpope/vim-dispatch"
 "github:tpope/vim-eunuch"
@@ -148,25 +176,29 @@
 "github:tpope/vim-speeddating"
 "github:travitch/hasksyn"
 "github:twinside/vim-haskellconceal"
+"github:tyru/open-browser.vim"
 "github:valloric/youcompleteme"
 "github:vim-airline/vim-airline-themes"
 "github:vim-pandoc/vim-pandoc"
 "github:vim-pandoc/vim-pandoc-after"
 "github:vim-pandoc/vim-pandoc-syntax"
 "github:vim-scripts/Colour-Sampler-Pack"
+"github:vim-scripts/Improved-AnsiEsc"
 "github:vim-scripts/Rename"
 "github:vim-scripts/ReplaceWithRegister"
 "github:vim-scripts/a.vim"
 "github:vim-scripts/align"
 "github:vim-scripts/argtextobj.vim"
 "github:vim-scripts/changeColorScheme.vim"
+"github:vim-scripts/mayansmoke.git"
 "github:vim-scripts/random.vim"
 "github:vim-scripts/tabmerge"
 "github:vim-scripts/wombat256.vim"
 "github:w0rp/ale"
 "github:wakatime/vim-wakatime"
-"github:wincent/command-t"
+"github:wellle/targets.vim"
 "github:will133/vim-dirdiff"
+"github:wincent/command-t"
 "github:xolox/vim-easytags"
 "github:xolox/vim-misc"
 "github:zah/nim.vim"
@@ -175,7 +207,6 @@
 "github:zig-lang/zig.vim"
 "goyo"
 "gruvbox"
-"jiangmiao-auto-pairs"
 "matchit.zip"
 "neco-look"
 "pathogen"
@@ -216,17 +247,18 @@
 "vim-airline"
 "vim-coffee-script"
 "vim-cursorword"
-"vim-dashboard"
 "vim-easy-align"
 "vim-ft-diff_fold"
 "vim-gista"
 "vim-gitgutter"
+"vim-github-dashboard"
 "vim-iced-coffee-script"
 "vim-javascript"
 "vim-jsbeautify"
 "vim-latex-live-preview"
 "vim-logreview"
 "vim-multiple-cursors"
+"vim-pencil"
 "vim-ruby"
 "vim-scouter"
 "vim-signature"
diff --git a/pkgs/misc/vim-plugins/vim-utils.nix b/pkgs/misc/vim-plugins/vim-utils.nix
index 23749fd4ce60..e11419846aeb 100644
--- a/pkgs/misc/vim-plugins/vim-utils.nix
+++ b/pkgs/misc/vim-plugins/vim-utils.nix
@@ -325,11 +325,14 @@ rec {
 
   # add a customize option to a vim derivation
   makeCustomizable = vim: vim // {
-    customize = {name, vimrcConfig}: vimWithRC {
+    customize = { name, vimrcConfig }: vimWithRC {
       vimExecutable = "${vim}/bin/vim";
       inherit name;
       vimrcFile = vimrcFile vimrcConfig;
     };
+
+    override = f: makeCustomizable (vim.override f);
+    overrideAttrs = f: makeCustomizable (vim.overrideAttrs f);
   };
 
   pluginnames2Nix = {name, namefiles} : vim_configurable.customize {
diff --git a/pkgs/os-specific/darwin/apple-source-releases/ICU/clang-5.patch b/pkgs/os-specific/darwin/apple-source-releases/ICU/clang-5.patch
new file mode 100644
index 000000000000..fd9df8129407
--- /dev/null
+++ b/pkgs/os-specific/darwin/apple-source-releases/ICU/clang-5.patch
@@ -0,0 +1,22 @@
+diff --git a/icuSources/i18n/ucoleitr.cpp b/icuSources/i18n/ucoleitr.cpp
+index ecc94c9..936452f 100644
+--- a/icuSources/i18n/ucoleitr.cpp
++++ b/icuSources/i18n/ucoleitr.cpp
+@@ -320,7 +320,7 @@ ucol_nextProcessed(UCollationElements *elems,
+                    int32_t            *ixHigh,
+                    UErrorCode         *status)
+ {
+-    return (UCollationPCE::UCollationPCE(elems)).nextProcessed(ixLow, ixHigh, status);
++    return (UCollationPCE(elems)).nextProcessed(ixLow, ixHigh, status);
+ }
+ 
+ 
+@@ -384,7 +384,7 @@ ucol_previousProcessed(UCollationElements *elems,
+                    int32_t            *ixHigh,
+                    UErrorCode         *status)
+ {
+-    return (UCollationPCE::UCollationPCE(elems)).previousProcessed(ixLow, ixHigh, status);
++    return (UCollationPCE(elems)).previousProcessed(ixLow, ixHigh, status);
+ }
+ 
+ U_NAMESPACE_BEGIN
diff --git a/pkgs/os-specific/darwin/apple-source-releases/ICU/default.nix b/pkgs/os-specific/darwin/apple-source-releases/ICU/default.nix
index 2d098418f030..eef26f4b79a6 100644
--- a/pkgs/os-specific/darwin/apple-source-releases/ICU/default.nix
+++ b/pkgs/os-specific/darwin/apple-source-releases/ICU/default.nix
@@ -3,6 +3,8 @@
 appleDerivation {
   nativeBuildInputs = [ cctools ];
 
+  patches = [ ./clang-5.patch ];
+
   postPatch = ''
     substituteInPlace makefile \
       --replace /usr/bin/ "" \
diff --git a/pkgs/os-specific/darwin/lsusb/default.nix b/pkgs/os-specific/darwin/lsusb/default.nix
new file mode 100644
index 000000000000..0b59ecb2299e
--- /dev/null
+++ b/pkgs/os-specific/darwin/lsusb/default.nix
@@ -0,0 +1,28 @@
+{ stdenv, fetchFromGitHub }:
+
+stdenv.mkDerivation rec {
+  version = "1.0";
+  name = "lsusb-${version}";
+
+  src = fetchFromGitHub {
+    owner = "jlhonora";
+    repo = "lsusb";
+    rev = "8a6bd7084a55a58ade6584af5075c1db16afadd1";
+    sha256 = "0p8pkcgvsx44dd56wgipa8pzi3298qk9h4rl9pwsw1939hjx6h0g";
+  };
+
+  installPhase = ''
+    mkdir -p $out/bin
+    mkdir -p $out/share/man/man8
+    install -m 0755 lsusb $out/bin
+    install -m 0444 man/lsusb.8 $out/share/man/man8
+  '';
+
+  meta = {
+    homepage = https://github.com/jlhonora/lsusb;
+    description = "lsusb command for Mac OS X";
+    platforms = stdenv.lib.platforms.darwin;
+    license = stdenv.lib.licenses.mit;
+    maintainers = [ stdenv.lib.maintainers.varunpatro ];
+  };
+}
diff --git a/pkgs/os-specific/linux/apparmor/default.nix b/pkgs/os-specific/linux/apparmor/default.nix
index 29e1357d38a8..0bb5561e9572 100644
--- a/pkgs/os-specific/linux/apparmor/default.nix
+++ b/pkgs/os-specific/linux/apparmor/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, makeWrapper, autoreconfHook
+{ stdenv, fetchurl, fetchpatch, makeWrapper, autoreconfHook
 , pkgconfig, which
 , flex, bison
 , linuxHeaders ? stdenv.cc.libc.linuxHeaders
@@ -35,6 +35,27 @@ let
     substituteInPlace ./common/Make.rules --replace "/usr/share/man" "share/man"
   '';
 
+  # use 'if c then x else null' to avoid rebuilding
+  # patches = stdenv.lib.optionals stdenv.hostPlatform.isMusl [
+  patches = if stdenv.hostPlatform.isMusl then [
+    (fetchpatch {
+      url = "https://git.alpinelinux.org/cgit/aports/plain/testing/apparmor/0002-Provide-missing-secure_getenv-and-scandirat-function.patch?id=74b8427cc21f04e32030d047ae92caa618105b53";
+      name = "0002-Provide-missing-secure_getenv-and-scandirat-function.patch";
+      sha256 = "0pj1bzifghxwxlc39j8hyy17dkjr9fk64kkj94ayymyprz4i4nac";
+    })
+    (fetchpatch {
+      url = "https://git.alpinelinux.org/cgit/aports/plain/testing/apparmor/0003-Added-missing-typedef-definitions-on-parser.patch?id=74b8427cc21f04e32030d047ae92caa618105b53";
+      name = "0003-Added-missing-typedef-definitions-on-parser.patch";
+      sha256 = "0yyaqz8jlmn1bm37arggprqz0njb4lhjni2d9c8qfqj0kll0bam0";
+    })
+    (fetchpatch {
+      url = "https://git.alpinelinux.org/cgit/aports/plain/testing/apparmor/0007-Do-not-build-install-vim-file-with-utils-package.patch?id=74b8427cc21f04e32030d047ae92caa618105b53";
+      name = "0007-Do-not-build-install-vim-file-with-utils-package.patch";
+      sha256 = "1m4dx901biqgnr4w4wz8a2z9r9dxyw7wv6m6mqglqwf2lxinqmp4";
+    })
+    # (alpine patches {1,4,5,6,8} are needed for apparmor 2.11, but not 2.12)
+  ] else null;
+
   # FIXME: convert these to a single multiple-outputs package?
 
   libapparmor = stdenv.mkDerivation {
@@ -63,6 +84,8 @@ let
       substituteInPlace ./libraries/libapparmor/src/Makefile.am --replace "/usr/include/netinet/in.h" "${stdenv.cc.libc.dev}/include/netinet/in.h"
       substituteInPlace ./libraries/libapparmor/src/Makefile.in --replace "/usr/include/netinet/in.h" "${stdenv.cc.libc.dev}/include/netinet/in.h"
     '';
+    inherit patches;
+
     postPatch = "cd ./libraries/libapparmor";
     configureFlags = "--with-python --with-perl";
 
@@ -90,6 +113,7 @@ let
     ];
 
     prePatch = prePatchCommon;
+    inherit patches;
     postPatch = "cd ./utils";
     makeFlags = ''LANGS='';
     installFlags = ''DESTDIR=$(out) BINDIR=$(out)/bin VIM_INSTALL_PATH=$(out)/share PYPREFIX='';
@@ -145,6 +169,7 @@ let
       ## techdoc.pdf still doesn't build ...
       substituteInPlace ./parser/Makefile --replace "manpages htmlmanpages pdf" "manpages htmlmanpages"
     '';
+    inherit patches;
     postPatch = "cd ./parser";
     makeFlags = ''LANGS= USE_SYSTEM=1 INCLUDEDIR=${libapparmor}/include'';
     installFlags = ''DESTDIR=$(out) DISTRO=unknown'';
diff --git a/pkgs/os-specific/linux/audit/default.nix b/pkgs/os-specific/linux/audit/default.nix
index 4adc321d9308..390bab849c28 100644
--- a/pkgs/os-specific/linux/audit/default.nix
+++ b/pkgs/os-specific/linux/audit/default.nix
@@ -1,5 +1,5 @@
 {
-  stdenv, buildPackages, fetchurl,
+  stdenv, buildPackages, fetchurl, fetchpatch,
   enablePython ? false, python ? null,
 }:
 
@@ -27,6 +27,22 @@ stdenv.mkDerivation rec {
 
   enableParallelBuilding = true;
 
+  patches = stdenv.lib.optional stdenv.hostPlatform.isMusl [
+    (fetchpatch {
+      url = "https://git.alpinelinux.org/cgit/aports/plain/main/audit/0002-auparse-remove-use-of-rawmemchr.patch?id=3e57180fdf3f90c30a25aea44f57846efc93a696";
+      name = "0002-auparse-remove-use-of-rawmemchr.patch";
+      sha256 = "1caaqbfgb2rq3ria5bz4n8x30ihgihln6w9w9a46k62ba0wh9rkz";
+    })
+    (fetchpatch {
+      url = "https://git.alpinelinux.org/cgit/aports/plain/main/audit/0003-all-get-rid-of-strndupa.patch?id=3e57180fdf3f90c30a25aea44f57846efc93a696";
+      name = "0003-all-get-rid-of-strndupa.patch";
+      sha256 = "1ddrm6a0ijrf7caw1wpw2kkbjp2lkxkmc16v51j5j7dvdalc6591";
+    })
+  ];
+
+  prePatch = ''
+    sed -i 's,#include <sys/poll.h>,#include <poll.h>\n#include <limits.h>,' audisp/audispd.c
+  '';
   meta = {
     description = "Audit Library";
     homepage = http://people.redhat.com/sgrubb/audit/;
diff --git a/pkgs/os-specific/linux/bcc/default.nix b/pkgs/os-specific/linux/bcc/default.nix
index 23e8c1ca7d7e..2e2c872fb187 100644
--- a/pkgs/os-specific/linux/bcc/default.nix
+++ b/pkgs/os-specific/linux/bcc/default.nix
@@ -1,5 +1,7 @@
-{ stdenv, fetchFromGitHub, fetchpatch, makeWrapper, cmake, llvmPackages_5, kernel
-, flex, bison, elfutils, python, pythonPackages, luajit, netperf, iperf, libelf }:
+{ stdenv, fetchFromGitHub, fetchpatch, makeWrapper, cmake, llvmPackages, kernel
+, flex, bison, elfutils, python, pythonPackages, luajit, netperf, iperf, libelf
+, systemtap
+}:
 
 stdenv.mkDerivation rec {
   version = "0.5.0";
@@ -13,8 +15,9 @@ stdenv.mkDerivation rec {
   };
 
   buildInputs = [
-    llvmPackages_5.llvm llvmPackages_5.clang-unwrapped kernel
+    llvmPackages.llvm llvmPackages.clang-unwrapped kernel
     elfutils python pythonPackages.netaddr luajit netperf iperf
+    systemtap.stapBuild
   ];
 
   patches = [
@@ -29,7 +32,12 @@ stdenv.mkDerivation rec {
     # libelf is incompatible with elfutils-libelf
     ++ stdenv.lib.filter (x: x != libelf) kernel.moduleBuildDependencies;
 
-  cmakeFlags="-DBCC_KERNEL_MODULES_DIR=${kernel.dev}/lib/modules";
+  cmakeFlags =
+    [ "-DBCC_KERNEL_MODULES_DIR=${kernel.dev}/lib/modules"
+      "-DREVISION=${version}"
+      "-DENABLE_USDT=ON"
+      "-DENABLE_CPP_API=ON"
+    ];
 
   postInstall = ''
     mkdir -p $out/bin $out/share
diff --git a/pkgs/os-specific/linux/busybox/default.nix b/pkgs/os-specific/linux/busybox/default.nix
index a8d5ab48ac21..c83a526b2460 100644
--- a/pkgs/os-specific/linux/busybox/default.nix
+++ b/pkgs/os-specific/linux/busybox/default.nix
@@ -1,11 +1,13 @@
 { stdenv, lib, buildPackages, fetchurl, fetchpatch
 , enableStatic ? false
 , enableMinimal ? false
-, useMusl ? false, musl
+, useMusl ? stdenv.hostPlatform.libc == "musl", musl
 , extraConfig ? ""
 , buildPlatform, hostPlatform
 }:
 
+assert stdenv.hostPlatform.libc == "musl" -> useMusl;
+
 let
   configParser = ''
     function parseconfig {
@@ -24,6 +26,10 @@ let
     }
   '';
 
+  libcConfig = lib.optionalString useMusl ''
+    CONFIG_FEATURE_UTMP n
+    CONFIG_FEATURE_WTMP n
+  '';
 in
 
 stdenv.mkDerivation rec {
@@ -67,8 +73,12 @@ stdenv.mkDerivation rec {
     # Set paths for console fonts.
     CONFIG_DEFAULT_SETFONT_DIR "/etc/kbd"
 
+    # Bump from 4KB, much faster I/O
+    CONFIG_FEATURE_COPYBUF_KB 64
+
     ${extraConfig}
     CONFIG_CROSS_COMPILER_PREFIX "${stdenv.cc.targetPrefix}"
+    ${libcConfig}
     EOF
 
     make oldconfig
@@ -77,7 +87,7 @@ stdenv.mkDerivation rec {
   '';
 
   postConfigure = lib.optionalString useMusl ''
-    makeFlagsArray+=("CC=${stdenv.cc.targetPrefix}gcc -isystem ${musl}/include -B${musl}/lib -L${musl}/lib")
+    makeFlagsArray+=("CC=${stdenv.cc.targetPrefix}cc -isystem ${musl.dev}/include -B${musl}/lib -L${musl}/lib")
   '';
 
   depsBuildBuild = [ buildPackages.stdenv.cc ];
diff --git a/pkgs/os-specific/linux/busybox/sandbox-shell.nix b/pkgs/os-specific/linux/busybox/sandbox-shell.nix
new file mode 100644
index 000000000000..b94fae7f787b
--- /dev/null
+++ b/pkgs/os-specific/linux/busybox/sandbox-shell.nix
@@ -0,0 +1,27 @@
+{ busybox, hostPlatform }:
+
+# Minimal shell for use as basic /bin/sh in sandbox builds
+busybox.override {
+  # musl roadmap has RISC-V support projected for 1.1.20
+  useMusl = !hostPlatform.isRiscV;
+  enableStatic = true;
+  enableMinimal = true;
+  extraConfig = ''
+    CONFIG_FEATURE_FANCY_ECHO y
+    CONFIG_FEATURE_SH_MATH y
+    CONFIG_FEATURE_SH_MATH_64 y
+
+    CONFIG_ASH y
+    CONFIG_ASH_OPTIMIZE_FOR_SIZE y
+
+    CONFIG_ASH_ALIAS y
+    CONFIG_ASH_BASH_COMPAT y
+    CONFIG_ASH_CMDCMD y
+    CONFIG_ASH_ECHO y
+    CONFIG_ASH_GETOPTS y
+    CONFIG_ASH_INTERNAL_GLOB y
+    CONFIG_ASH_JOB_CONTROL y
+    CONFIG_ASH_PRINTF y
+    CONFIG_ASH_TEST y
+  '';
+}
diff --git a/pkgs/os-specific/linux/conky/default.nix b/pkgs/os-specific/linux/conky/default.nix
index 93681b2e18c7..ea9c3f937d0e 100644
--- a/pkgs/os-specific/linux/conky/default.nix
+++ b/pkgs/os-specific/linux/conky/default.nix
@@ -64,13 +64,13 @@ with stdenv.lib;
 
 stdenv.mkDerivation rec {
   name = "conky-${version}";
-  version = "1.10.7";
+  version = "1.10.8";
 
   src = fetchFromGitHub {
     owner = "brndnmtthws";
     repo = "conky";
     rev = "v${version}";
-    sha256 = "1qx47m4c1j3wh1hmbn2h8wyvg0ncr3kz1zcdj9si2bdyz3s0i9w7";
+    sha256 = "18kxjmaplqvn81vmvybvpc9qczm7wgcgd4af3a8vsqdv77cn5bwq";
   };
 
   postPatch = ''
diff --git a/pkgs/os-specific/linux/cpupower/default.nix b/pkgs/os-specific/linux/cpupower/default.nix
index ba2e9c8c52dc..d10b789f3e47 100644
--- a/pkgs/os-specific/linux/cpupower/default.nix
+++ b/pkgs/os-specific/linux/cpupower/default.nix
@@ -1,19 +1,22 @@
-{ stdenv, fetchurl, kernel, coreutils, pciutils, gettext }:
+{ stdenv, buildPackages, fetchurl, kernel, pciutils, gettext }:
 
 stdenv.mkDerivation {
   name = "cpupower-${kernel.version}";
 
   src = kernel.src;
 
-  buildInputs = [ coreutils pciutils gettext ];
+  nativeBuildInputs = [ gettext ];
+  buildInputs = [ pciutils ];
 
   postPatch = ''
     cd tools/power/cpupower
-    sed -i 's,/bin/true,${coreutils}/bin/true,' Makefile
-    sed -i 's,/bin/pwd,${coreutils}/bin/pwd,' Makefile
-    sed -i 's,/usr/bin/install,${coreutils}/bin/install,' Makefile
+    sed -i 's,/bin/true,${buildPackages.coreutils}/bin/true,' Makefile
+    sed -i 's,/bin/pwd,${buildPackages.coreutils}/bin/pwd,' Makefile
+    sed -i 's,/usr/bin/install,${buildPackages.coreutils}/bin/install,' Makefile
   '';
 
+  makeFlags = [ "CROSS=${stdenv.cc.targetPrefix}" ];
+
   installFlags = [
     "bindir=$(out)/bin"
     "sbindir=$(out)/sbin"
diff --git a/pkgs/os-specific/linux/dbus-broker/default.nix b/pkgs/os-specific/linux/dbus-broker/default.nix
index 51d0fb5e1254..c97f1b54622a 100644
--- a/pkgs/os-specific/linux/dbus-broker/default.nix
+++ b/pkgs/os-specific/linux/dbus-broker/default.nix
@@ -1,21 +1,21 @@
 { stdenv, fetchgit, fetchFromGitHub, docutils, meson, ninja, pkgconfig
-, dbus, glib, systemd }:
+, dbus, glib, linuxHeaders, systemd }:
 
 stdenv.mkDerivation rec {
   name = "dbus-broker-${version}";
-  version = "9";
+  version = "11";
 
   src = fetchFromGitHub {
     owner           = "bus1";
     repo            = "dbus-broker";
     rev             = "v${version}";
-    sha256          = "0q0kbinkkia96bsy7jczlyjz8xgdrfkyx8v6gdr2zflgv0mgbsab";
+    sha256          = "19sszb6ac7md494i996ixqmz9b3gim8rrv2nbrmlgjd59gk6hf7b";
     fetchSubmodules = true;
   };
 
   nativeBuildInputs = [ docutils meson ninja pkgconfig ];
 
-  buildInputs = [ dbus glib systemd ];
+  buildInputs = [ dbus glib linuxHeaders systemd ];
 
   enableParallelBuilding = true;
 
@@ -27,6 +27,9 @@ stdenv.mkDerivation rec {
 
   postInstall = ''
     install -Dm644 ../README $out/share/doc/dbus-broker/README
+
+    sed -i $out/lib/systemd/{system,user}/dbus-broker.service \
+      -e 's,^ExecReload.*busctl,ExecReload=${systemd}/bin/busctl,'
   '';
 
   checkPhase = "ninja test";
diff --git a/pkgs/os-specific/linux/eudev/default.nix b/pkgs/os-specific/linux/eudev/default.nix
index 67ce39ddbd39..0ca85c7e50bc 100644
--- a/pkgs/os-specific/linux/eudev/default.nix
+++ b/pkgs/os-specific/linux/eudev/default.nix
@@ -3,10 +3,10 @@ let
   s = # Generated upstream information
   rec {
     baseName="eudev";
-    version = "3.2.4";
+    version = "3.2.5";
     name="${baseName}-${version}";
     url="http://dev.gentoo.org/~blueness/eudev/eudev-${version}.tar.gz";
-    sha256 = "1vbg2k5mngyxdcdw4jkkzxbwdgrcr643hkby1whz7x91kg4g9p6x";
+    sha256 = "1bwh72brp4dvr2dm6ng0lflic6abl87h8zk209im5lna0m0x1hj9";
   };
 
   nativeBuildInputs = [ pkgconfig ];
diff --git a/pkgs/os-specific/linux/ffado/default.nix b/pkgs/os-specific/linux/ffado/default.nix
index aa273ec613ee..4e2d2b388419 100644
--- a/pkgs/os-specific/linux/ffado/default.nix
+++ b/pkgs/os-specific/linux/ffado/default.nix
@@ -25,11 +25,11 @@ let
 in
 stdenv.mkDerivation rec {
   name = "${prefix}ffado-${version}";
-  version = "2.3.0";
+  version = "2.4.0";
 
   src = fetchurl {
     url = "http://www.ffado.org/files/libffado-${version}.tgz";
-    sha256 = "122z8gya60nyg47i738z2yr4qcjyk2xix4kwhf5ybkmp23kcgqqq";
+    sha256 = "14rprlcd0gpvg9kljh0zzjzd2rc9hbqqpjidshxxjvvfh4r00f4f";
   };
 
   nativeBuildInputs = [ scons pkgconfig which makeWrapper python ];
@@ -41,12 +41,8 @@ stdenv.mkDerivation rec {
     optXdg_utils libxmlxx glibmm
   ];
 
-  patches = [
-    ./gcc6.patch
-    ./glibc226.patch
-  ];
-
   postPatch = ''
+    sed '1iimport sys' -i SConstruct
     # SConstruct checks cpuinfo and an objdump of /bin/mount to determine the appropriate arch
     # Let's just skip this and tell it which to build
     sed '/def is_userspace_32bit(cpuinfo):/a\
diff --git a/pkgs/os-specific/linux/ffado/gcc6.patch b/pkgs/os-specific/linux/ffado/gcc6.patch
deleted file mode 100644
index f9cad9c88abd..000000000000
--- a/pkgs/os-specific/linux/ffado/gcc6.patch
+++ /dev/null
@@ -1,19 +0,0 @@
-Author: Adrian Knoth <adi@drcomp.erfurt.thur.de>
-Forwarded: Yes
-Applied-Upstream: 2.3.1
-Last-Update: 2016-08-11
-Description: Fix FTBFS with gcc6
-
-Index: b/src/ffadotypes.h
-===================================================================
---- a/src/ffadotypes.h
-+++ b/src/ffadotypes.h
-@@ -51,6 +51,8 @@ struct ffado_handle {
- };
- 
- 
-+#include <cmath>
-+#include <algorithm>
- #include <vector>
- #include <string>
- 
diff --git a/pkgs/os-specific/linux/ffado/glibc226.patch b/pkgs/os-specific/linux/ffado/glibc226.patch
deleted file mode 100644
index e147ee9aa76a..000000000000
--- a/pkgs/os-specific/linux/ffado/glibc226.patch
+++ /dev/null
@@ -1,10 +0,0 @@
---- libffado/src/libutil/PosixMessageQueue.cpp  (revision 2705)
-+++ libffado/src/libutil/PosixMessageQueue.cpp  (revision 2706)
-@@ -30,6 +30,7 @@
- #include <errno.h>
- #include <string.h>
- #include <poll.h>
-+#include <signal.h>
-
- #define MQ_INVALID_ID ((mqd_t) -1)
- // one second
diff --git a/pkgs/os-specific/linux/firmware/fwupd/default.nix b/pkgs/os-specific/linux/firmware/fwupd/default.nix
index 988f4efb9cdb..858f1448dfac 100644
--- a/pkgs/os-specific/linux/firmware/fwupd/default.nix
+++ b/pkgs/os-specific/linux/firmware/fwupd/default.nix
@@ -1,56 +1,87 @@
-{ stdenv, fetchurl, gtk_doc, pkgconfig, gobjectIntrospection, intltool
+{ stdenv, fetchurl, fetchpatch, gtk_doc, pkgconfig, gobjectIntrospection, intltool
 , libgudev, polkit, appstream-glib, gusb, sqlite, libarchive, glib_networking
-, libsoup, docbook2x, gpgme, libxslt, libelf, libsmbios, efivar, glibcLocales
-, fwupdate, libyaml, valgrind, meson, libuuid, pygobject3, colord
-, pillow, ninja, gcab, gnutls, python3Packages, wrapGAppsHook
+, libsoup, help2man, gpgme, libxslt, elfutils, libsmbios, efivar, glibcLocales
+, fwupdate, libyaml, valgrind, meson, libuuid, colord, docbook_xml_dtd_43, docbook_xsl
+, ninja, gcab, gnutls, python3, wrapGAppsHook, json_glib
+, shared_mime_info, umockdev
 }:
 let
-  version = "1.0.1";
+  version = "1.0.4";
+  python = python3.withPackages (p: with p; [ pygobject3 pycairo pillow ]);
+  installedTestsPython = python3.withPackages (p: with p; [ pygobject3 requests ]);
 in stdenv.mkDerivation {
   name = "fwupd-${version}";
   src = fetchurl {
     url = "https://people.freedesktop.org/~hughsient/releases/fwupd-${version}.tar.xz";
-    sha256 = "1k627rja7df51dkzqvkzgbwrrj4049k6408d01m34n66zwr2fp59";
+    sha256 = "1n4d6fw3ffg051072hbxn106s52x2wlh5dh2kxwdfjsb5kh03ra3";
   };
 
+  outputs = [ "out" "devdoc" "man" "installedTests" ];
+
   nativeBuildInputs = [
-    meson ninja gtk_doc pkgconfig gobjectIntrospection intltool glibcLocales
-    valgrind gcab docbook2x libxslt pygobject3 python3Packages.pycairo wrapGAppsHook
+    meson ninja gtk_doc pkgconfig gobjectIntrospection intltool glibcLocales shared_mime_info
+    valgrind gcab docbook_xml_dtd_43 docbook_xsl help2man libxslt python wrapGAppsHook
   ];
   buildInputs = [
-    polkit appstream-glib gusb sqlite libarchive libsoup libelf libsmbios fwupdate libyaml
-    libgudev colord gpgme libuuid pillow gnutls glib_networking
+    polkit appstream-glib gusb sqlite libarchive libsoup elfutils libsmbios fwupdate libyaml
+    libgudev colord gpgme libuuid gnutls glib_networking efivar json_glib umockdev
   ];
 
   LC_ALL = "en_US.UTF-8"; # For po/make-images
 
-  NIX_CFLAGS_COMPILE = [
-    "-I${efivar}/include/efivar"
-    # warning: "__LIBELF_INTERNAL__" is not defined
-    "-Wno-error=undef"
-  ];
-
   patches = [
     ./fix-missing-deps.patch
+    # https://github.com/hughsie/fwupd/issues/403
+    (fetchpatch {
+      url = https://github.com/hughsie/fwupd/commit/bd6082574989e4f48b66c7270bb408d439b77a06.patch;
+      sha256 = "17pixyizkmn6wlsjmr1wwya17ivn770hdv9mp769vifxinya8w9y";
+    })
+    # drop docbook2man
+    (fetchpatch {
+      url = https://github.com/hughsie/fwupd/commit/2c43d3e6e65868b66a9a64a76123697e259ec7c2.patch;
+      sha256 = "0vjv7jnai0g96frlipk2sc59pj3mhq9di01hajycjv7y5v6qqrmc";
+    })
+    # https://github.com/hughsie/fwupd/issues/405
+    (fetchpatch {
+      url = https://github.com/hughsie/fwupd/pull/407.patch;
+      sha256 = "1dxhqps12x7bz0s974xk5hfpk4nwn1gs29vl0dfi9j54wy18f688";
+    })
   ];
+
   postPatch = ''
+    # needs a different set of modules than po/make-images
+    escapedInterpreterLine=$(echo "${installedTestsPython}/bin/python3" | sed 's|\\|\\\\|g')
+    sed -i -e "1 s|.*|#\!$escapedInterpreterLine|" data/installed-tests/hardware.py
+
     patchShebangs .
+    substituteInPlace data/installed-tests/fwupdmgr.test.in --subst-var-by installedtestsdir "$installedTests/share/installed-tests/fwupd"
+  '';
+
+  doCheck = true;
+
+  preFixup = ''
+    gappsWrapperArgs+=(--prefix XDG_DATA_DIRS : "${shared_mime_info}/share")
   '';
 
   mesonFlags = [
-    "-Denable-man=false"
-    "-Denable-tests=false"
-    "-Denable-doc=false"
-    "-Dwith-bootdir=/boot"
-    "-Dwith-udevdir=lib/udev"
-    "-Dwith-systemdunitdir=lib/systemd/system"
+    "-Dplugin_dummy=true"
+    "-Dbootdir=/boot"
+    "-Dudevdir=lib/udev"
+    "-Dsystemdunitdir=lib/systemd/system"
     "--localstatedir=/var"
   ];
 
+  postInstall = ''
+    moveToOutput share/installed-tests "$installedTests"
+    wrapProgram $installedTests/share/installed-tests/fwupd/hardware.py \
+      --prefix GI_TYPELIB_PATH : "$out/lib/girepository-1.0:${libsoup}/lib/girepository-1.0"
+  '';
+
   enableParallelBuilding = true;
-  meta = {
+  meta = with stdenv.lib; {
     homepage = https://fwupd.org/;
-    license = [ stdenv.lib.licenses.gpl2 ];
-    platforms = stdenv.lib.platforms.linux;
+    maintainers = with maintainers; [];
+    license = [ licenses.gpl2 ];
+    platforms = platforms.linux;
   };
 }
diff --git a/pkgs/os-specific/linux/firmware/fwupd/fix-missing-deps.patch b/pkgs/os-specific/linux/firmware/fwupd/fix-missing-deps.patch
index 46e11952afe0..d1d7c06027f9 100644
--- a/pkgs/os-specific/linux/firmware/fwupd/fix-missing-deps.patch
+++ b/pkgs/os-specific/linux/firmware/fwupd/fix-missing-deps.patch
@@ -2,7 +2,7 @@
 +++ b/data/builder/meson.build
 @@ -1,3 +0,0 @@
 -install_data('README.md',
--  install_dir : join_paths(get_option('localstatedir'), 'lib', 'fwupd', 'builder')
+-  install_dir : join_paths(localstatedir, 'lib', 'fwupd', 'builder')
 -)
 --- a/data/meson.build
 +++ b/data/meson.build
@@ -11,15 +11,15 @@
  endif
  
 -install_data(['daemon.conf'],
--  install_dir : join_paths(get_option('sysconfdir'), 'fwupd')
+-  install_dir : join_paths(sysconfdir, 'fwupd')
 -)
 -
  install_data(['org.freedesktop.fwupd.metainfo.xml'],
-   install_dir: join_paths(get_option('datadir'), 'metainfo')
+   install_dir: join_paths(datadir, 'metainfo')
  )
  
  install_data(['org.freedesktop.fwupd.conf'],
--  install_dir : join_paths(get_option('sysconfdir'), 'dbus-1', 'system.d')
+-  install_dir : join_paths(sysconfdir, 'dbus-1', 'system.d')
 +  install_dir : join_paths(get_option('prefix'), 'etc', 'dbus-1', 'system.d')
  )
  
@@ -30,14 +30,14 @@
        'GPG-KEY-Hughski-Limited',
        'GPG-KEY-Linux-Vendor-Firmware-Service',
      ],
--    install_dir : join_paths(get_option('sysconfdir'), 'pki', 'fwupd')
+-    install_dir : join_paths(sysconfdir, 'pki', 'fwupd')
 +    install_dir : join_paths(get_option('prefix'), 'etc', 'pki', 'fwupd')
    )
  
    install_data([
        'GPG-KEY-Linux-Vendor-Firmware-Service',
      ],
--    install_dir : join_paths(get_option('sysconfdir'), 'pki', 'fwupd-metadata')
+-    install_dir : join_paths(sysconfdir, 'pki', 'fwupd-metadata')
 +    install_dir : join_paths(get_option('prefix'), 'etc', 'pki', 'fwupd-metadata')
    )
  endif
@@ -46,13 +46,13 @@
    install_data([
        'LVFS-CA.pem',
      ],
--    install_dir : join_paths(get_option('sysconfdir'), 'pki', 'fwupd')
+-    install_dir : join_paths(sysconfdir, 'pki', 'fwupd')
 +    install_dir : join_paths(get_option('prefix'), 'etc', 'pki', 'fwupd')
    )
    install_data([
        'LVFS-CA.pem',
      ],
--    install_dir : join_paths(get_option('sysconfdir'), 'pki', 'fwupd-metadata')
+-    install_dir : join_paths(sysconfdir, 'pki', 'fwupd-metadata')
 +    install_dir : join_paths(get_option('prefix'), 'etc', 'pki', 'fwupd-metadata')
    )
  endif
@@ -63,7 +63,7 @@
        'lvfs.conf',
        'lvfs-testing.conf',
      ],
--    install_dir : join_paths(get_option('sysconfdir'), 'fwupd', 'remotes.d')
+-    install_dir : join_paths(sysconfdir, 'fwupd', 'remotes.d')
 +    install_dir : join_paths(get_option('prefix'), 'etc', 'fwupd', 'remotes.d')
    )
  endif
@@ -72,7 +72,7 @@
    output : 'fwupd.conf',
    configuration : con2,
    install: true,
--  install_dir: join_paths(get_option('sysconfdir'), 'fwupd', 'remotes.d'),
+-  install_dir: join_paths(sysconfdir, 'fwupd', 'remotes.d'),
 +  install_dir: join_paths(get_option('prefix'), 'etc', 'fwupd', 'remotes.d'),
  )
  configure_file(
@@ -80,7 +80,7 @@
    output : 'vendor.conf',
    configuration : con2,
    install: true,
--  install_dir: join_paths(get_option('sysconfdir'), 'fwupd', 'remotes.d'),
+-  install_dir: join_paths(sysconfdir, 'fwupd', 'remotes.d'),
 +  install_dir: join_paths(get_option('prefix'), 'etc', 'fwupd', 'remotes.d'),
  )
 --- a/meson_post_install.sh
diff --git a/pkgs/os-specific/linux/firmware/intel2200BGFirmware/default.nix b/pkgs/os-specific/linux/firmware/intel2200BGFirmware/default.nix
index c87023bf336d..e8ab77a509ff 100644
--- a/pkgs/os-specific/linux/firmware/intel2200BGFirmware/default.nix
+++ b/pkgs/os-specific/linux/firmware/intel2200BGFirmware/default.nix
@@ -6,7 +6,7 @@ stdenv.mkDerivation {
   name = "intel2200BGFirmware-${version}";
 
   src = fetchurl {
-    url = "http://pkgs.fedoraproject.org/repo/pkgs/ipw2200-firmware/ipw2200-fw-${version}.tgz/eaba788643c7cc7483dd67ace70f6e99/ipw2200-fw-${version}.tgz";
+    url = "http://src.fedoraproject.org/repo/pkgs/ipw2200-firmware/ipw2200-fw-${version}.tgz/eaba788643c7cc7483dd67ace70f6e99/ipw2200-fw-${version}.tgz";
     sha256 = "c6818c11c18cc030d55ff83f64b2bad8feef485e7742f84f94a61d811a6258bd";
   };
 
diff --git a/pkgs/os-specific/linux/fscrypt/default.nix b/pkgs/os-specific/linux/fscrypt/default.nix
index 8efef4fac4bd..267e31d427c6 100644
--- a/pkgs/os-specific/linux/fscrypt/default.nix
+++ b/pkgs/os-specific/linux/fscrypt/default.nix
@@ -1,21 +1,21 @@
-{ stdenv, buildGoPackage, fetchFromGitHub, libargon2, pam }:
+{ stdenv, buildGoPackage, fetchFromGitHub, pam }:
 
 # Don't use this for anything important yet!
 
 buildGoPackage rec {
   name = "fscrypt-${version}";
-  version = "0.2.2";
+  version = "0.2.3";
 
   goPackagePath = "github.com/google/fscrypt";
 
   src = fetchFromGitHub {
     owner = "google";
     repo = "fscrypt";
-    rev = version;
-    sha256 = "0a85vj1zsybhzvvgdvlw6ywh2a6inmrmc95pfa1js4vkx0ixf1kh";
+    rev = "v${version}";
+    sha256 = "126bbxim4nj56kplvyv528i88mfray50r2rc6ysblkmaw6x0fd9c";
   };
 
-  buildInputs = [ libargon2 pam ];
+  buildInputs = [ pam ];
 
   meta = with stdenv.lib; {
     description =
diff --git a/pkgs/os-specific/linux/fscryptctl/default.nix b/pkgs/os-specific/linux/fscryptctl/default.nix
index 81cd95332c81..8622dc001a87 100644
--- a/pkgs/os-specific/linux/fscryptctl/default.nix
+++ b/pkgs/os-specific/linux/fscryptctl/default.nix
@@ -4,19 +4,17 @@
 
 stdenv.mkDerivation rec {
   name = "fscryptctl-unstable-${version}";
-  version = "2017-09-12";
+  version = "2017-10-23";
 
   goPackagePath = "github.com/google/fscrypt";
 
   src = fetchFromGitHub {
     owner = "google";
     repo = "fscryptctl";
-    rev = "f037dcf4354ce8f25d0f371b58dfe7a7ac27576f";
-    sha256 = "1dw1y6jbm2ibn7npvpw6cl28rcz0jz4as2yl6walz7ppmqbj9scf";
+    rev = "142326810eb19d6794793db6d24d0775a15aa8e5";
+    sha256 = "1853hlpklisbqnkb7a921dsf0vp2nr2im26zpmrs592cnpsvk3hb";
   };
 
-  patches = [ ./install.patch ];
-
   makeFlags = [ "DESTDIR=$(out)/bin" ];
 
   meta = with stdenv.lib; {
diff --git a/pkgs/os-specific/linux/fscryptctl/install.patch b/pkgs/os-specific/linux/fscryptctl/install.patch
deleted file mode 100644
index 11f9843bbfb0..000000000000
--- a/pkgs/os-specific/linux/fscryptctl/install.patch
+++ /dev/null
@@ -1,22 +0,0 @@
---- a/Makefile	2017-09-24 22:48:19.322116085 +0200
-+++ b/Makefile	2017-09-24 22:50:07.655725022 +0200
-@@ -19,7 +19,7 @@
- CFLAGS += -O2 -Wall
- 
- INSTALL = install
--DESTDIR = /usr/local/bin
-+DESTDIR ?= /usr/local/bin
- 
- OBJECTS = $(NAME).o sha512.o
- 
-@@ -38,8 +38,8 @@
- 	@python -m pytest test.py -s -q
- 
- install: $(NAME)
--	$(INSTALL) -d $(DEST_DIR)
--	$(INSTALL) $(NAME) $(DEST_DIR)
-+	$(INSTALL) -d $(DESTDIR)
-+	$(INSTALL) $(NAME) $(DESTDIR)
- 
- clean:
- 	rm -f $(OBJECTS)
diff --git a/pkgs/os-specific/linux/gogoclient/default.nix b/pkgs/os-specific/linux/gogoclient/default.nix
index 7383db95c375..521b81cd690d 100644
--- a/pkgs/os-specific/linux/gogoclient/default.nix
+++ b/pkgs/os-specific/linux/gogoclient/default.nix
@@ -9,7 +9,7 @@ stdenv.mkDerivation rec {
 
   src = fetchurl {
     #url = http://gogo6.com/downloads/gogoc-1_2-RELEASE.tar.gz;
-    url = http://pkgs.fedoraproject.org/repo/pkgs/gogoc/gogoc-1_2-RELEASE.tar.gz/41177ed683cf511cc206c7782c37baa9/gogoc-1_2-RELEASE.tar.gz;
+    url = http://src.fedoraproject.org/repo/pkgs/gogoc/gogoc-1_2-RELEASE.tar.gz/41177ed683cf511cc206c7782c37baa9/gogoc-1_2-RELEASE.tar.gz;
     sha256 = "a0ef45c0bd1fc9964dc8ac059b7d78c12674bf67ef641740554e166fa99a2f49";
   };
   patches = [./gcc46-include-fix.patch ./config-paths.patch ];
diff --git a/pkgs/os-specific/linux/hdparm/default.nix b/pkgs/os-specific/linux/hdparm/default.nix
index 0f794c315e54..87cb17329e8c 100644
--- a/pkgs/os-specific/linux/hdparm/default.nix
+++ b/pkgs/os-specific/linux/hdparm/default.nix
@@ -1,11 +1,11 @@
 { stdenv, fetchurl }:
 
 stdenv.mkDerivation rec {
-  name = "hdparm-9.53";
+  name = "hdparm-9.54";
 
   src = fetchurl {
     url = "mirror://sourceforge/hdparm/${name}.tar.gz";
-    sha256 = "1rb5086gp4l1h1fn2nk10ziqxjxigsd0c1zczahwc5k9vy8zawr6";
+    sha256 = "0ghnhdj7wfw6acfyhdawpfa5n9kvkvzgi1fw6i7sghgbjx5nhyjd";
 
   };
 
diff --git a/pkgs/os-specific/linux/iproute/default.nix b/pkgs/os-specific/linux/iproute/default.nix
index be9be49208a4..269c59f5e6fe 100644
--- a/pkgs/os-specific/linux/iproute/default.nix
+++ b/pkgs/os-specific/linux/iproute/default.nix
@@ -1,17 +1,19 @@
-{ fetchurl, stdenv, lib, flex, bison, db, iptables, pkgconfig }:
+{ fetchurl, stdenv, lib, flex, bash, bison, db, iptables, pkgconfig }:
 
 stdenv.mkDerivation rec {
   name = "iproute2-${version}";
-  version = "4.14.1";
+  version = "4.15.0";
 
   src = fetchurl {
     url = "mirror://kernel/linux/utils/net/iproute2/${name}.tar.xz";
-    sha256 = "0rq0n7yxb0hmk0s6wx5awzjgf7ikjbibd0a5ix20ldfcmxlc0fnl";
+    sha256 = "0mc3g4kj7h3jhwz2b2gdf41gp6bhqn7axh4mnyvhkdnpk5m63m28";
   };
 
   preConfigure = ''
     patchShebangs ./configure
     sed -e '/ARPDDIR/d' -i Makefile
+    # Don't build netem tools--they're not installed and require HOSTCC
+    substituteInPlace Makefile --replace " netem " " "
   '';
 
   makeFlags = [
@@ -37,6 +39,10 @@ stdenv.mkDerivation rec {
 
   enableParallelBuilding = true;
 
+  postInstall = ''
+    PATH=${bash}/bin:$PATH patchShebangs $out/sbin
+  '';
+
   meta = with stdenv.lib; {
     homepage = https://wiki.linuxfoundation.org/networking/iproute2;
     description = "A collection of utilities for controlling TCP/IP networking and traffic control in Linux";
diff --git a/pkgs/os-specific/linux/iptables/default.nix b/pkgs/os-specific/linux/iptables/default.nix
index ee1d21ddf2b9..1668933db809 100644
--- a/pkgs/os-specific/linux/iptables/default.nix
+++ b/pkgs/os-specific/linux/iptables/default.nix
@@ -3,11 +3,11 @@
 
 stdenv.mkDerivation rec {
   name = "iptables-${version}";
-  version = "1.6.1";
+  version = "1.6.2";
 
   src = fetchurl {
     url = "http://www.netfilter.org/projects/iptables/files/${name}.tar.bz2";
-    sha256 = "1x8c9y340x79djsq54bc1674ryv59jfphrk4f88i7qbvbnyxghhg";
+    sha256 = "0crp0lvh5m2f15pr8cw97h8yb8zjj10x95zj06j46cr68vx2vl2m";
   };
 
   nativeBuildInputs = [ bison flex pkgconfig ];
diff --git a/pkgs/os-specific/linux/iputils/default.nix b/pkgs/os-specific/linux/iputils/default.nix
index dd5770744bf7..a7fbcce31753 100644
--- a/pkgs/os-specific/linux/iputils/default.nix
+++ b/pkgs/os-specific/linux/iputils/default.nix
@@ -4,8 +4,6 @@
 , libidn, nettle
 , SGMLSpm, libgcrypt }:
 
-assert stdenv ? glibc;
-
 let
   time = "20161105";
 in
@@ -23,11 +21,12 @@ stdenv.mkDerivation rec {
       -i doc/Makefile
   '';
 
-  makeFlags = "USE_GNUTLS=no";
+  # Disable idn usage w/musl: https://github.com/iputils/iputils/pull/111
+  makeFlags = [ "USE_GNUTLS=no" ] ++ stdenv.lib.optional stdenv.hostPlatform.isMusl "USE_IDN=no";
 
   buildInputs = [
-    libsysfs opensp openssl libcap docbook_sgml_dtd_31 SGMLSpm libgcrypt libidn nettle
-  ];
+    libsysfs opensp openssl libcap docbook_sgml_dtd_31 SGMLSpm libgcrypt nettle
+  ] ++ stdenv.lib.optional (!stdenv.hostPlatform.isMusl) libidn;
 
   buildFlags = "man all ninfod";
 
diff --git a/pkgs/os-specific/linux/kernel-headers/4.4.nix b/pkgs/os-specific/linux/kernel-headers/4.4.nix
deleted file mode 100644
index e8e041f48eba..000000000000
--- a/pkgs/os-specific/linux/kernel-headers/4.4.nix
+++ /dev/null
@@ -1,61 +0,0 @@
-{ stdenvNoCC, lib, buildPackages
-, buildPlatform, hostPlatform
-, fetchurl, perl
-}:
-
-assert hostPlatform.isLinux;
-
-let
-  version = "4.4.10";
-  inherit (hostPlatform.platform) kernelHeadersBaseConfig;
-in
-
-stdenvNoCC.mkDerivation {
-  name = "linux-headers-${version}";
-
-  src = fetchurl {
-    url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz";
-    sha256 = "1kpjvvd9q9wwr3314q5ymvxii4dv2d27295bzly225wlc552xhja";
-  };
-
-  targetConfig = if hostPlatform != buildPlatform then hostPlatform.config else null;
-
-  platform = hostPlatform.platform.kernelArch;
-
-  # It may look odd that we use `stdenvNoCC`, and yet explicit depend on a cc.
-  # We do this so we have a build->build, not build->host, C compiler.
-  depsBuildBuild = [ buildPackages.stdenv.cc ];
-  nativeBuildInputs = [ perl ];
-
-  extraIncludeDirs = lib.optional hostPlatform.isPowerPC ["ppc"];
-
-  buildPhase = ''
-    if test -n "$targetConfig"; then
-       export ARCH=$platform
-    fi
-    make ${kernelHeadersBaseConfig} SHELL=bash
-    make mrproper headers_check SHELL=bash
-  '';
-
-  installPhase = ''
-    make INSTALL_HDR_PATH=$out headers_install
-
-    # Some builds (e.g. KVM) want a kernel.release.
-    mkdir -p $out/include/config
-    echo "${version}-default" > $out/include/config/kernel.release
-  '';
-
-  # !!! hacky
-  fixupPhase = ''
-    ln -s asm $out/include/asm-$platform
-    if test "$platform" = "i386" -o "$platform" = "x86_64"; then
-      ln -s asm $out/include/asm-x86
-    fi
-  '';
-
-  meta = with lib; {
-    description = "Header files and scripts for Linux kernel";
-    license = licenses.gpl2;
-    platforms = platforms.linux;
-  };
-}
diff --git a/pkgs/os-specific/linux/kernel-headers/default.nix b/pkgs/os-specific/linux/kernel-headers/default.nix
new file mode 100644
index 000000000000..8107f7d96575
--- /dev/null
+++ b/pkgs/os-specific/linux/kernel-headers/default.nix
@@ -0,0 +1,62 @@
+{ stdenvNoCC, lib, buildPackages
+, buildPlatform, hostPlatform
+, fetchurl, perl
+}:
+
+assert hostPlatform.isLinux;
+
+let
+  common = { version, sha256, patches ? null }: stdenvNoCC.mkDerivation {
+    name = "linux-headers-${version}";
+
+    src = fetchurl {
+      url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz";
+      inherit sha256;
+    };
+
+    ARCH = hostPlatform.platform.kernelArch;
+
+    # It may look odd that we use `stdenvNoCC`, and yet explicit depend on a cc.
+    # We do this so we have a build->build, not build->host, C compiler.
+    depsBuildBuild = [ buildPackages.stdenv.cc ];
+    nativeBuildInputs = [ perl ];
+
+    extraIncludeDirs = lib.optional hostPlatform.isPowerPC ["ppc"];
+
+    # "patches" array defaults to 'null' to avoid changing hash
+    # and causing mass rebuild
+    inherit patches;
+
+    buildPhase = ''
+      make mrproper headers_check SHELL=bash
+    '';
+
+    installPhase = ''
+      make INSTALL_HDR_PATH=$out headers_install
+
+      # Some builds (e.g. KVM) want a kernel.release.
+      mkdir -p $out/include/config
+      echo "${version}-default" > $out/include/config/kernel.release
+    '';
+
+    # !!! hacky
+    fixupPhase = ''
+      ln -s asm $out/include/asm-$platform
+      if test "$platform" = "i386" -o "$platform" = "x86_64"; then
+        ln -s asm $out/include/asm-x86
+      fi
+    '';
+
+    meta = with lib; {
+      description = "Header files and scripts for Linux kernel";
+      license = licenses.gpl2;
+      platforms = platforms.linux;
+    };
+  };
+in {
+
+  linuxHeaders = common {
+    version = "4.15";
+    sha256 = "0sd7l9n9h7vf9c6gd6ciji28hawda60yj0llh17my06m0s4lf9js";
+  };
+}
diff --git a/pkgs/os-specific/linux/kernel/common-config.nix b/pkgs/os-specific/linux/kernel/common-config.nix
index 82a092cd5393..2fa343412019 100644
--- a/pkgs/os-specific/linux/kernel/common-config.nix
+++ b/pkgs/os-specific/linux/kernel/common-config.nix
@@ -16,7 +16,7 @@
 
 */
 
-{ stdenv, version, kernelPlatform, extraConfig, features }:
+{ stdenv, version, extraConfig, features }:
 
 with stdenv.lib;
 
@@ -232,18 +232,23 @@ with stdenv.lib;
 
   # USB serial devices.
   USB_SERIAL_GENERIC y # USB Generic Serial Driver
-  USB_SERIAL_KEYSPAN_MPR y # include firmware for various USB serial devices
-  USB_SERIAL_KEYSPAN_USA28 y
-  USB_SERIAL_KEYSPAN_USA28X y
-  USB_SERIAL_KEYSPAN_USA28XA y
-  USB_SERIAL_KEYSPAN_USA28XB y
-  USB_SERIAL_KEYSPAN_USA19 y
-  USB_SERIAL_KEYSPAN_USA18X y
-  USB_SERIAL_KEYSPAN_USA19W y
-  USB_SERIAL_KEYSPAN_USA19QW y
-  USB_SERIAL_KEYSPAN_USA19QI y
-  USB_SERIAL_KEYSPAN_USA49W y
-  USB_SERIAL_KEYSPAN_USA49WLC y
+
+  # Include firmware for various USB serial devices.
+  # Only applicable for kernels below 4.16, after that no firmware is shipped in the kernel tree.
+  ${optionalString (versionOlder version "4.16") ''
+    USB_SERIAL_KEYSPAN_MPR y
+    USB_SERIAL_KEYSPAN_USA28 y
+    USB_SERIAL_KEYSPAN_USA28X y
+    USB_SERIAL_KEYSPAN_USA28XA y
+    USB_SERIAL_KEYSPAN_USA28XB y
+    USB_SERIAL_KEYSPAN_USA19 y
+    USB_SERIAL_KEYSPAN_USA18X y
+    USB_SERIAL_KEYSPAN_USA19W y
+    USB_SERIAL_KEYSPAN_USA19QW y
+    USB_SERIAL_KEYSPAN_USA19QI y
+    USB_SERIAL_KEYSPAN_USA49W y
+    USB_SERIAL_KEYSPAN_USA49WLC y
+  ''}
 
   # Device mapper (RAID, LVM, etc.)
   MD y
@@ -445,6 +450,7 @@ with stdenv.lib;
   RC_DEVICES? y # Enable IR devices
   RT2800USB_RT55XX y
   SCHED_AUTOGROUP y
+  CFS_BANDWIDTH y
   SCSI_LOGGING y # SCSI logging facility
   SERIAL_8250 y # 8250/16550 and compatible serial support
   SLIP_COMPRESSED y # CSLIP compressed headers
@@ -630,15 +636,17 @@ with stdenv.lib;
   FW_LOADER_USER_HELPER_FALLBACK? n
 
   # Disable various self-test modules that have no use in a production system
-  ${optionalString (versionOlder version "4.4") ''
-    ARM_KPROBES_TEST? n
-  ''}
-
+  # This menu disables all/most of them on >= 4.16
+  RUNTIME_TESTING_MENU? n
+  # For older kernels, painstakingly disable each symbol.
+  ARM_KPROBES_TEST? n
   ASYNC_RAID6_TEST? n
   ATOMIC64_SELFTEST? n
   BACKTRACE_SELF_TEST? n
   CRC32_SELFTEST? n
   CRYPTO_TEST? n
+  DRM_DEBUG_MM_SELFTEST? n
+  EFI_TEST? n
   GLOB_SELFTEST? n
   INTERVAL_TREE_TEST? n
   LNET_SELFTEST? n
@@ -647,41 +655,50 @@ with stdenv.lib;
   NOTIFIER_ERROR_INJECTION? n
   PERCPU_TEST? n
   RBTREE_TEST? n
+  RCU_PERF_TEST? n
   RCU_TORTURE_TEST? n
+  TEST_ASYNC_DRIVER_PROBE? n
+  TEST_BITMAP? n
   TEST_BPF? n
   TEST_FIRMWARE? n
+  TEST_HASH? n
   TEST_HEXDUMP? n
+  TEST_KMOD? n
   TEST_KSTRTOX? n
   TEST_LIST_SORT? n
   TEST_LKM? n
+  TEST_PARMAN? n
   TEST_PRINTF? n
   TEST_RHASHTABLE? n
+  TEST_SORT? n
   TEST_STATIC_KEYS? n
   TEST_STRING_HELPERS? n
   TEST_UDELAY? n
   TEST_USER_COPY? n
+  TEST_UUID? n
+  WW_MUTEX_SELFTEST? n
   XZ_DEC_TEST? n
 
-  ${optionalString (versionAtLeast version "4.13") ''
-    TEST_KMOD n
+  ${optionalString (features.criu or false)  ''
+    EXPERT y
+    CHECKPOINT_RESTORE y
   ''}
 
-  ${optionalString (versionOlder version "4.4") ''
-    EFI_TEST? n
-    RCU_PERF_TEST? n
-    TEST_ASYNC_DRIVER_PROBE? n
-    TEST_BITMAP? n
-    TEST_HASH? n
-    TEST_UUID? n
+  ${optionalString ((features.criu or false) && (features.criu_revert_expert or true))
+    # Revert some changes, introduced by EXPERT, when necessary for criu
+  ''
+    RFKILL_INPUT? y
+    HID_PICOLCD_FB? y
+    HID_PICOLCD_BACKLIGHT? y
+    HID_PICOLCD_LCD? y
+    HID_PICOLCD_LEDS? y
+    HID_PICOLCD_CIR? y
+    DEBUG_MEMORY_INIT? y
   ''}
 
-  ${optionalString (versionAtLeast version "4.11") ''
-    DRM_DEBUG_MM_SELFTEST? n
-    TEST_PARMAN? n
-    TEST_SORT? n
-    WW_MUTEX_SELFTEST? n
+  ${optionalString (features.debug or false)  ''
+    DEBUG_INFO y
   ''}
 
-  ${kernelPlatform.kernelExtraConfig or ""}
   ${extraConfig}
 ''
diff --git a/pkgs/os-specific/linux/kernel/generate-config.pl b/pkgs/os-specific/linux/kernel/generate-config.pl
index 5bce3af94293..f886fcfdc358 100644
--- a/pkgs/os-specific/linux/kernel/generate-config.pl
+++ b/pkgs/os-specific/linux/kernel/generate-config.pl
@@ -13,18 +13,18 @@ use strict;
 use IPC::Open2;
 use Cwd;
 
-my $wd = getcwd;
-
+# exported via nix
 my $debug = $ENV{'DEBUG'};
 my $autoModules = $ENV{'AUTO_MODULES'};
 my $preferBuiltin = $ENV{'PREFER_BUILTIN'};
-    
+my $ignoreConfigErrors = $ENV{'ignoreConfigErrors'};
+my $buildRoot = $ENV{'BUILD_ROOT'};
 $SIG{PIPE} = 'IGNORE';
 
 # Read the answers.
 my %answers;
 my %requiredAnswers;
-open ANSWERS, "<$ENV{KERNEL_CONFIG}" or die;
+open ANSWERS, "<$ENV{KERNEL_CONFIG}" or die "Could not open answer file";
 while (<ANSWERS>) {
     chomp;
     s/#.*//;
@@ -40,7 +40,7 @@ close ANSWERS;
 sub runConfig {
 
     # Run `make config'.
-    my $pid = open2(\*IN, \*OUT, "make -C $ENV{SRC} O=$wd config SHELL=bash ARCH=$ENV{ARCH}");
+    my $pid = open2(\*IN, \*OUT, "make -C $ENV{SRC} O=$buildRoot config SHELL=bash ARCH=$ENV{ARCH}");
 
     # Parse the output, look for questions and then send an
     # appropriate answer.
@@ -122,7 +122,7 @@ runConfig;
 # there.  `make config' often overrides answers if later questions
 # cause options to be selected.
 my %config;
-open CONFIG, "<.config" or die;
+open CONFIG, "<$buildRoot/.config" or die "Could not read .config";
 while (<CONFIG>) {
     chomp;
     if (/^CONFIG_([A-Za-z0-9_]+)="(.*)"$/) {
@@ -137,7 +137,7 @@ while (<CONFIG>) {
 close CONFIG;
 
 foreach my $name (sort (keys %answers)) {
-    my $f = $requiredAnswers{$name} && $ENV{'ignoreConfigErrors'} ne "1"
+    my $f = $requiredAnswers{$name} && $ignoreConfigErrors ne "1"
         ? sub { die "error: " . $_[0]; } : sub { warn "warning: " . $_[0]; };
     &$f("unused option: $name\n") unless defined $config{$name};
     &$f("option not set correctly: $name (wanted '$answers{$name}', got '$config{$name}')\n")
diff --git a/pkgs/os-specific/linux/kernel/generic.nix b/pkgs/os-specific/linux/kernel/generic.nix
index e00bda692b3c..f69865cdc4df 100644
--- a/pkgs/os-specific/linux/kernel/generic.nix
+++ b/pkgs/os-specific/linux/kernel/generic.nix
@@ -1,3 +1,11 @@
+{ buildPackages, runCommand, nettools, bc, bison, flex, perl, gmp, libmpc, mpfr, openssl
+, ncurses
+, libelf
+, utillinux
+, writeTextFile, ubootTools
+, callPackage
+}:
+
 { stdenv, buildPackages, perl, buildLinux
 
 , # The kernel source tarball.
@@ -28,7 +36,7 @@
 , extraMeta ? {}
 , hostPlatform
 , ...
-}:
+} @ args:
 
 assert stdenv.isLinux;
 
@@ -45,8 +53,10 @@ let
   } // features) kernelPatches;
 
   config = import ./common-config.nix {
-    inherit stdenv version extraConfig;
-    kernelPlatform = hostPlatform;
+    inherit stdenv version ;
+    # append extraConfig for backwards compatibility but also means the user can't override the kernelExtraConfig part
+    extraConfig = extraConfig + lib.optionalString (hostPlatform.platform ? kernelExtraConfig) hostPlatform.platform.kernelExtraConfig;
+
     features = kernelFeatures; # Ensure we know of all extra patches, etc.
   };
 
@@ -65,10 +75,13 @@ let
     kernelConfig = kernelConfigFun config;
 
     depsBuildBuild = [ buildPackages.stdenv.cc ];
-    nativeBuildInputs = [ perl ];
+    nativeBuildInputs = [ perl ]
+      ++ lib.optionals (stdenv.lib.versionAtLeast version "4.16") [ bison flex ];
 
     platformName = hostPlatform.platform.name;
+    # e.g. "defconfig"
     kernelBaseConfig = hostPlatform.platform.kernelBaseConfig;
+    # e.g. "bzImage"
     kernelTarget = hostPlatform.platform.kernelTarget;
     autoModules = hostPlatform.platform.kernelAutoModules;
     preferBuiltin = hostPlatform.platform.kernelPreferBuiltin or false;
@@ -83,25 +96,25 @@ let
     inherit (kernel) src patches preUnpack;
 
     buildPhase = ''
-      cd $buildRoot
+      export buildRoot="''${buildRoot:-build}"
 
       # Get a basic config file for later refinement with $generateConfig.
-      make HOSTCC=${buildPackages.stdenv.cc.targetPrefix}gcc -C ../$sourceRoot O=$PWD $kernelBaseConfig ARCH=$arch
+      make HOSTCC=${buildPackages.stdenv.cc.targetPrefix}gcc -C . O="$buildRoot" $kernelBaseConfig ARCH=$arch
 
       # Create the config file.
       echo "generating kernel configuration..."
-      echo "$kernelConfig" > kernel-config
-      DEBUG=1 ARCH=$arch KERNEL_CONFIG=kernel-config AUTO_MODULES=$autoModules \
-           PREFER_BUILTIN=$preferBuiltin SRC=../$sourceRoot perl -w $generateConfig
+      echo "$kernelConfig" > "$buildRoot/kernel-config"
+      DEBUG=1 ARCH=$arch KERNEL_CONFIG="$buildRoot/kernel-config" AUTO_MODULES=$autoModules \
+           PREFER_BUILTIN=$preferBuiltin BUILD_ROOT="$buildRoot" SRC=. perl -w $generateConfig
     '';
 
-    installPhase = "mv .config $out";
+    installPhase = "mv $buildRoot/.config $out";
 
     enableParallelBuilding = true;
   };
 
-  kernel = buildLinux {
-    inherit version modDirVersion src kernelPatches stdenv extraMeta configfile;
+  kernel = (callPackage ./manual-config.nix {}) {
+    inherit version modDirVersion src kernelPatches stdenv extraMeta configfile hostPlatform;
 
     config = { CONFIG_MODULES = "y"; CONFIG_FW_LOADER = "m"; };
   };
diff --git a/pkgs/os-specific/linux/kernel/linux-4.13.nix b/pkgs/os-specific/linux/kernel/linux-4.13.nix
index 506682479c7c..e89222b2c629 100644
--- a/pkgs/os-specific/linux/kernel/linux-4.13.nix
+++ b/pkgs/os-specific/linux/kernel/linux-4.13.nix
@@ -1,6 +1,6 @@
 { stdenv, buildPackages, hostPlatform, fetchurl, perl, buildLinux, ... } @ args:
 
-import ./generic.nix (args // rec {
+buildLinux (args // rec {
   version = "4.13.16";
   extraMeta.branch = "4.13";
 
diff --git a/pkgs/os-specific/linux/kernel/linux-4.14.nix b/pkgs/os-specific/linux/kernel/linux-4.14.nix
index 413e3ea32dcf..b5fd5168cf82 100644
--- a/pkgs/os-specific/linux/kernel/linux-4.14.nix
+++ b/pkgs/os-specific/linux/kernel/linux-4.14.nix
@@ -2,14 +2,14 @@
 
 with stdenv.lib;
 
-import ./generic.nix (args // rec {
-  version = "4.14.17";
+buildLinux (args // rec {
+  version = "4.14.20";
 
   # branchVersion needs to be x.y
   extraMeta.branch = concatStrings (intersperse "." (take 2 (splitString "." version)));
 
   src = fetchurl {
     url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz";
-    sha256 = "0jqa86bnnlzv0r0bvzvmbj1c89a5m64zrjfvfrjlwg3vy63r9ii7";
+    sha256 = "14njnspxmyzpapjzm8macrv411ss63xb39nb00xix75glqmg9dsa";
   };
 } // (args.argsOverride or {}))
diff --git a/pkgs/os-specific/linux/kernel/linux-4.15.nix b/pkgs/os-specific/linux/kernel/linux-4.15.nix
index fa9d0b4bcdad..4bdcfba5db73 100644
--- a/pkgs/os-specific/linux/kernel/linux-4.15.nix
+++ b/pkgs/os-specific/linux/kernel/linux-4.15.nix
@@ -2,8 +2,8 @@
 
 with stdenv.lib;
 
-import ./generic.nix (args // rec {
-  version = "4.15.1";
+buildLinux (args // rec {
+  version = "4.15.4";
 
   # modDirVersion needs to be x.y.z, will automatically add .0 if needed
   modDirVersion = concatStrings (intersperse "." (take 3 (splitString "." "${version}.0")));
@@ -13,6 +13,6 @@ import ./generic.nix (args // rec {
 
   src = fetchurl {
     url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz";
-    sha256 = "1pxgs5wqmidwa5lz6q1m9gz6jyvhvlgy8r5bs48cm08b0vcwsvlq";
+    sha256 = "0fla9k90y6vaqvyjk81f59smcifcwickx4yr662m4whzkhd7wgd2";
   };
 } // (args.argsOverride or {}))
diff --git a/pkgs/os-specific/linux/kernel/linux-4.4.nix b/pkgs/os-specific/linux/kernel/linux-4.4.nix
index c1c989e28c84..94425f4d1e47 100644
--- a/pkgs/os-specific/linux/kernel/linux-4.4.nix
+++ b/pkgs/os-specific/linux/kernel/linux-4.4.nix
@@ -1,11 +1,11 @@
 { stdenv, buildPackages, hostPlatform, fetchurl, perl, buildLinux, ... } @ args:
 
-import ./generic.nix (args // rec {
-  version = "4.4.115";
+buildLinux (args // rec {
+  version = "4.4.116";
   extraMeta.branch = "4.4";
 
   src = fetchurl {
     url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz";
-    sha256 = "1pxm4r09402h4k8zgl0w1wm4vfvcaa3y7l36h50jr5wgi6l8rx2q";
+    sha256 = "18sz68gbms5rvjiy51b1dg1jlr7pwazw9fg6q5ffczk22icflvsn";
   };
 } // (args.argsOverride or {}))
diff --git a/pkgs/os-specific/linux/kernel/linux-4.9.nix b/pkgs/os-specific/linux/kernel/linux-4.9.nix
index cc02908fb89a..80db885170e4 100644
--- a/pkgs/os-specific/linux/kernel/linux-4.9.nix
+++ b/pkgs/os-specific/linux/kernel/linux-4.9.nix
@@ -1,11 +1,11 @@
 { stdenv, buildPackages, hostPlatform, fetchurl, perl, buildLinux, ... } @ args:
 
-import ./generic.nix (args // rec {
-  version = "4.9.80";
+buildLinux (args // rec {
+  version = "4.9.82";
   extraMeta.branch = "4.9";
 
   src = fetchurl {
     url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz";
-    sha256 = "0ys74q9f93c42flqracaqnkh0qwcbnimhppd80rz5hxgq3686bly";
+    sha256 = "105im51ax2cwfqkljfi1sqh6sap6sc76zh5l9n7fpbys04khnwab";
   };
 } // (args.argsOverride or {}))
diff --git a/pkgs/os-specific/linux/kernel/linux-beagleboard.nix b/pkgs/os-specific/linux/kernel/linux-beagleboard.nix
index 097408d61d98..4f0ff53c59ce 100644
--- a/pkgs/os-specific/linux/kernel/linux-beagleboard.nix
+++ b/pkgs/os-specific/linux/kernel/linux-beagleboard.nix
@@ -4,7 +4,7 @@ let
   modDirVersion = "4.14.12";
   tag = "r23";
 in
-stdenv.lib.overrideDerivation (import ./generic.nix (args // rec {
+stdenv.lib.overrideDerivation (buildLinux (args // rec {
   version = "${modDirVersion}-ti-${tag}";
   inherit modDirVersion;
 
diff --git a/pkgs/os-specific/linux/kernel/linux-hardened-copperhead.nix b/pkgs/os-specific/linux/kernel/linux-copperhead-hardened.nix
index d87ed3e8082d..0e39bc421c95 100644
--- a/pkgs/os-specific/linux/kernel/linux-hardened-copperhead.nix
+++ b/pkgs/os-specific/linux/kernel/linux-copperhead-hardened.nix
@@ -3,9 +3,9 @@
 with stdenv.lib;
 
 let
-  version = "4.15.1";
+  version = "4.15.4";
   revision = "a";
-  sha256 = "1k9ng0110vzl29rzbglk3vmnpfqk04rd2mja5aqql81z5pb1x528";
+  sha256 = "0j7nla8vjrxr82nfx8dl34qk8b56piwqbndqch9rv7plgl30hkj7";
 
   # modVersion needs to be x.y.z, will automatically add .0 if needed
   modVersion = concatStrings (intersperse "." (take 3 (splitString "." "${version}.0")));
@@ -15,7 +15,7 @@ let
 
   modDirVersion = "${modVersion}-hardened";
 in
-import ./generic.nix (args // {
+buildLinux (args // {
   inherit modDirVersion;
 
   version = "${version}-${revision}";
diff --git a/pkgs/os-specific/linux/kernel/linux-mptcp.nix b/pkgs/os-specific/linux/kernel/linux-mptcp.nix
index 9720e3c0e4a8..c4bade2abeda 100644
--- a/pkgs/os-specific/linux/kernel/linux-mptcp.nix
+++ b/pkgs/os-specific/linux/kernel/linux-mptcp.nix
@@ -1,9 +1,10 @@
 { stdenv, buildPackages, hostPlatform, fetchFromGitHub, perl, buildLinux, ... } @ args:
 
-import ./generic.nix (rec {
+buildLinux (rec {
   mptcpVersion = "0.93";
   modDirVersion = "4.9.60";
   version = "${modDirVersion}-mptcp_v${mptcpVersion}";
+  # autoModules= true;
 
   extraMeta = {
     branch = "4.4";
@@ -43,4 +44,4 @@ import ./generic.nix (rec {
     TCP_CONG_BALIA m
 
   '' + (args.extraConfig or "");
-} // args // (args.argsOverride or {}))
+} // args)
diff --git a/pkgs/os-specific/linux/kernel/linux-riscv.nix b/pkgs/os-specific/linux/kernel/linux-riscv.nix
new file mode 100644
index 000000000000..b2eb0a69a8ec
--- /dev/null
+++ b/pkgs/os-specific/linux/kernel/linux-riscv.nix
@@ -0,0 +1,18 @@
+{ stdenv, buildPackages, hostPlatform, fetchFromGitHub, perl, buildLinux, libelf, utillinux, ... } @ args:
+
+buildLinux (args // rec {
+  version = "4.16-rc1";
+  modDirVersion = "4.16.0-rc1";
+  extraMeta.branch = "4.16";
+
+  src = fetchFromGitHub {
+    owner = "riscv";
+    repo ="riscv-linux";
+    rev = "a31991a9c6ce2c86fd676cf458a0ec10edc20d37";
+    sha256 = "0n97wfbi3pnp5c70xfj7s0fk8zjjkjz6ldxh7n54kbf64l4in01f";
+  };
+
+  # Should the testing kernels ever be built on Hydra?
+  extraMeta.hydraPlatforms = [];
+
+} // (args.argsOverride or {}))
diff --git a/pkgs/os-specific/linux/kernel/linux-rpi.nix b/pkgs/os-specific/linux/kernel/linux-rpi.nix
index 1efb11435e2f..a96a910c68c9 100644
--- a/pkgs/os-specific/linux/kernel/linux-rpi.nix
+++ b/pkgs/os-specific/linux/kernel/linux-rpi.nix
@@ -4,7 +4,7 @@ let
   modDirVersion = "4.9.59";
   tag = "1.20171029";
 in
-stdenv.lib.overrideDerivation (import ./generic.nix (args // rec {
+stdenv.lib.overrideDerivation (buildLinux (args // rec {
   version = "${modDirVersion}-${tag}";
   inherit modDirVersion;
 
diff --git a/pkgs/os-specific/linux/kernel/linux-samus-4.12.nix b/pkgs/os-specific/linux/kernel/linux-samus-4.12.nix
index c65182271dc3..442c89675119 100644
--- a/pkgs/os-specific/linux/kernel/linux-samus-4.12.nix
+++ b/pkgs/os-specific/linux/kernel/linux-samus-4.12.nix
@@ -1,6 +1,6 @@
 { stdenv, buildPackages, hostPlatform, fetchFromGitHub, perl, buildLinux, ncurses, ... } @ args:
 
-import ./generic.nix (args // rec {
+buildLinux (args // rec {
   version = "4.12.2";
   extraMeta.branch = "4.12-2";
 
diff --git a/pkgs/os-specific/linux/kernel/linux-testing-bcachefs.nix b/pkgs/os-specific/linux/kernel/linux-testing-bcachefs.nix
index ac13835afdd4..5aae37418ce8 100644
--- a/pkgs/os-specific/linux/kernel/linux-testing-bcachefs.nix
+++ b/pkgs/os-specific/linux/kernel/linux-testing-bcachefs.nix
@@ -1,15 +1,15 @@
 { stdenv, buildPackages, hostPlatform, fetchgit, perl, buildLinux, ... } @ args:
 
-import ./generic.nix (args // rec {
-  version = "4.11.2017.08.23";
-  modDirVersion = "4.11.0";
+buildLinux (args // rec {
+  version = "4.15.2018.02.09";
+  modDirVersion = "4.15.0";
   extraMeta.branch = "master";
   extraMeta.maintainers = [ stdenv.lib.maintainers.davidak ];
 
   src = fetchgit {
     url = "https://evilpiepirate.org/git/bcachefs.git";
-    rev = "fb8082a13d49397346a04ce4d3904569b0287738";
-    sha256 = "18csg2zb4lnhid27h5w95j3g8np29m8y3zfpfgjl1jr2jks64kid";
+    rev = "4506cd5ead31209a6a646c2412cbc7be735ebda4";
+    sha256 = "0fcyf3y27k2lga5na4dhdyc47br840gkqynv8gix297pqxgidrib";
   };
 
   extraConfig = ''
@@ -20,4 +20,3 @@ import ./generic.nix (args // rec {
   extraMeta.hydraPlatforms = [];
 
 } // (args.argsOverride or {}))
-
diff --git a/pkgs/os-specific/linux/kernel/linux-testing.nix b/pkgs/os-specific/linux/kernel/linux-testing.nix
index 1a309ff6376b..2c32ba573114 100644
--- a/pkgs/os-specific/linux/kernel/linux-testing.nix
+++ b/pkgs/os-specific/linux/kernel/linux-testing.nix
@@ -1,13 +1,13 @@
 { stdenv, buildPackages, hostPlatform, fetchurl, perl, buildLinux, libelf, utillinux, ... } @ args:
 
-import ./generic.nix (args // rec {
-  version = "4.15-rc9";
-  modDirVersion = "4.15.0-rc9";
-  extraMeta.branch = "4.15";
+buildLinux (args // rec {
+  version = "4.16-rc1";
+  modDirVersion = "4.16.0-rc1";
+  extraMeta.branch = "4.16";
 
   src = fetchurl {
     url = "https://git.kernel.org/torvalds/t/linux-${version}.tar.gz";
-    sha256 = "18xhy38fqyzg9yiljhdj2y0skjf2yhxvhzbija3is75wyv7g55l6";
+    sha256 = "19m1scqfcslawsxci0lypy32af315by3rg10lczv0jh2j4gyggmd";
   };
 
   # Should the testing kernels ever be built on Hydra?
diff --git a/pkgs/os-specific/linux/kernel/manual-config.nix b/pkgs/os-specific/linux/kernel/manual-config.nix
index 9a7e96094107..60fb00645139 100644
--- a/pkgs/os-specific/linux/kernel/manual-config.nix
+++ b/pkgs/os-specific/linux/kernel/manual-config.nix
@@ -1,8 +1,8 @@
-{ buildPackages, runCommand, nettools, bc, perl, gmp, libmpc, mpfr, openssl
+{ buildPackages, runCommand, nettools, bc, bison, flex, perl, gmp, libmpc, mpfr, openssl
+, ncurses ? null
 , libelf
 , utillinux
 , writeTextFile, ubootTools
-, hostPlatform
 }:
 
 let
@@ -34,15 +34,17 @@ in {
   # Use defaultMeta // extraMeta
   extraMeta ? {},
   # Whether to utilize the controversial import-from-derivation feature to parse the config
-  allowImportFromDerivation ? false
+  allowImportFromDerivation ? false,
+
+  hostPlatform
 }:
 
 let
   inherit (stdenv.lib)
-    hasAttr getAttr optional optionalString optionalAttrs maintainers platforms;
+    hasAttr getAttr optional optionals optionalString optionalAttrs maintainers platforms;
 
   # Dependencies that are required to build kernel modules
-  moduleBuildDependencies = stdenv.lib.optional (stdenv.lib.versionAtLeast version "4.14") libelf;
+  moduleBuildDependencies = optional (stdenv.lib.versionAtLeast version "4.14") libelf;
 
   installkernel = writeTextFile { name = "installkernel"; executable=true; text = ''
     #!${stdenv.shell} -e
@@ -77,17 +79,17 @@ let
       isModular = config.isYes "MODULES";
 
       installsFirmware = (config.isEnabled "FW_LOADER") &&
-        (isModular || (config.isDisabled "FIRMWARE_IN_KERNEL"));
+        (isModular || (config.isDisabled "FIRMWARE_IN_KERNEL")) &&
+        (stdenv.lib.versionOlder version "4.14");
     in (optionalAttrs isModular { outputs = [ "out" "dev" ]; }) // {
       passthru = {
-        inherit version modDirVersion config kernelPatches configfile moduleBuildDependencies;
+        inherit version modDirVersion config kernelPatches configfile
+          moduleBuildDependencies stdenv;
       };
 
       inherit src;
 
       preUnpack = ''
-        mkdir build
-        export buildRoot="$(pwd)/build"
       '';
 
       patches = map (p: p.patch) kernelPatches;
@@ -102,7 +104,25 @@ let
 
       configurePhase = ''
         runHook preConfigure
+
+        mkdir build
+        export buildRoot="$(pwd)/build"
+
+        echo "manual-config configurePhase buildRoot=$buildRoot pwd=$PWD"
+
+        if [[ -z "$buildRoot" || ! -d "$buildRoot" ]]; then
+          echo "set $buildRoot to the build folder please"
+          exit 1
+        fi
+
+        if [ -f "$buildRoot/.config" ]; then
+          echo "Could not link $buildRoot/.config : file exists"
+          exit 1
+        fi
         ln -sv ${configfile} $buildRoot/.config
+
+        # reads the existing .config file and prompts the user for options in
+        # the current kernel source that are not found in the file.
         make $makeFlags "''${makeFlagsArray[@]}" oldconfig
         runHook postConfigure
 
@@ -115,6 +135,8 @@ let
 
         # Note: we can get rid of this once http://permalink.gmane.org/gmane.linux.kbuild.devel/13800 is merged.
         buildFlagsArray+=("KBUILD_BUILD_TIMESTAMP=$(date -u -d @$SOURCE_DATE_EPOCH)")
+
+        cd $buildRoot
       '';
 
       buildFlags = [
@@ -134,14 +156,13 @@ let
                           if platform.kernelTarget == "zImage" || platform.kernelTarget == "Image.gz" then "zinstall" else
                           "install") ];
 
-      postInstall = ''
-        mkdir -p $dev
-        cp $buildRoot/vmlinux $dev/
-      '' + (optionalString installsFirmware ''
+      postInstall = (optionalString installsFirmware ''
         mkdir -p $out/lib/firmware
       '') + (if (platform ? kernelDTB && platform.kernelDTB) then ''
         make $makeFlags "''${makeFlagsArray[@]}" dtbs dtbs_install INSTALL_DTBS_PATH=$out/dtbs
       '' else "") + (if isModular then ''
+        mkdir -p $dev
+        cp vmlinux $dev/
         if [ -z "$dontStrip" ]; then
           installFlagsArray+=("INSTALL_MOD_STRIP=1")
         fi
@@ -151,7 +172,7 @@ let
         unlink $out/lib/modules/${modDirVersion}/source
 
         mkdir -p $dev/lib/modules/${modDirVersion}/build
-        cp -dpR ../$sourceRoot $dev/lib/modules/${modDirVersion}/source
+        cp -dpR .. $dev/lib/modules/${modDirVersion}/source
         cd $dev/lib/modules/${modDirVersion}/source
 
         cp $buildRoot/{.config,Module.symvers} $dev/lib/modules/${modDirVersion}/build
@@ -170,7 +191,7 @@ let
         # from drivers/ in the future; it adds 50M to keep all of its
         # headers on 3.10 though.
 
-        chmod u+w -R ../source
+        chmod u+w -R ..
         arch=$(cd $dev/lib/modules/${modDirVersion}/build/arch; ls)
 
         # Remove unused arches
@@ -216,7 +237,7 @@ let
           "The Linux kernel" +
           (if kernelPatches == [] then "" else
             " (with patches: "
-            + stdenv.lib.concatStrings (stdenv.lib.intersperse ", " (map (x: x.name) kernelPatches))
+            + stdenv.lib.concatStringsSep ", " (map (x: x.name) kernelPatches)
             + ")");
         license = stdenv.lib.licenses.gpl2;
         homepage = https://www.kernel.org/;
@@ -241,12 +262,15 @@ stdenv.mkDerivation ((drvAttrs config hostPlatform.platform kernelPatches config
       ++ optional (stdenv.hostPlatform.platform.kernelTarget == "uImage") buildPackages.ubootTools
       ++ optional (stdenv.lib.versionAtLeast version "4.14") libelf
       ++ optional (stdenv.lib.versionAtLeast version "4.15") utillinux
+      ++ optionals (stdenv.lib.versionAtLeast version "4.16") [ bison flex ]
       ;
 
   hardeningDisable = [ "bindnow" "format" "fortify" "stackprotector" "pic" ];
 
+  # Absolute paths for compilers avoid any PATH-clobbering issues.
   makeFlags = commonMakeFlags ++ [
-    "HOSTCC=${buildPackages.stdenv.cc.targetPrefix}gcc"
+    "CC=${stdenv.cc}/bin/${stdenv.cc.targetPrefix}cc"
+    "HOSTCC=${buildPackages.stdenv.cc}/bin/${buildPackages.stdenv.cc.targetPrefix}cc"
     "ARCH=${stdenv.hostPlatform.platform.kernelArch}"
   ] ++ stdenv.lib.optional (stdenv.hostPlatform != stdenv.buildPlatform) [
     "CROSS_COMPILE=${stdenv.cc.targetPrefix}"
diff --git a/pkgs/os-specific/linux/kernel/patches.nix b/pkgs/os-specific/linux/kernel/patches.nix
index 754a2372c6d8..42e14ad7c40b 100644
--- a/pkgs/os-specific/linux/kernel/patches.nix
+++ b/pkgs/os-specific/linux/kernel/patches.nix
@@ -72,4 +72,34 @@ rec {
       sha256 = "09096npxpgvlwdz3pb3m9brvxh7vy0xc9z9p8hh85xyczyzcsjhr";
     };
   };
+
+  riscv_modules = {
+    name = "riscv-modules";
+    patch = ./riscv-modules.patch;
+  };
+
+  # http://lists.infradead.org/pipermail/linux-riscv/2018-February/000054.html
+  riscv_irq_busy = {
+    name = "riscv-irq-busy";
+    patch = ./riscv-irq-busy.patch;
+  };
+
+  # http://lists.infradead.org/pipermail/linux-riscv/2018-February/000059.html
+  riscv_install = {
+    name = "riscv-install";
+    patch = ./riscv-install.patch;
+  };
+
+  # http://lists.infradead.org/pipermail/linux-riscv/2018-February/000056.html
+  riscv_initrd = {
+    name = "riscv-initrd";
+    patch = ./riscv-initrd.patch;
+  };
+
+  # http://lists.infradead.org/pipermail/linux-riscv/2018-February/000058.html
+  riscv_initrd_free = {
+    name = "riscv-initrd-free";
+    patch = ./riscv-initrd-free.patch;
+  };
+
 }
diff --git a/pkgs/os-specific/linux/kernel/perf.nix b/pkgs/os-specific/linux/kernel/perf.nix
index 1936f6578b6f..06552eb35799 100644
--- a/pkgs/os-specific/linux/kernel/perf.nix
+++ b/pkgs/os-specific/linux/kernel/perf.nix
@@ -1,7 +1,8 @@
 { lib, stdenv, kernel, elfutils, python, perl, newt, slang, asciidoc, xmlto, makeWrapper
 , docbook_xsl, docbook_xml_dtd_45, libxslt, flex, bison, pkgconfig, libunwind, binutils
-, libiberty, libaudit, libbfd
-, zlib, withGtk ? false, gtk2 ? null }:
+, libiberty, libaudit, libbfd, openssl, systemtap, numactl
+, zlib, withGtk ? false, gtk2 ? null
+}:
 
 with lib;
 
@@ -15,16 +16,25 @@ stdenv.mkDerivation {
 
   preConfigure = ''
     cd tools/perf
-    sed -i s,/usr/include/elfutils,$elfutils/include/elfutils, Makefile
+
+    substituteInPlace Makefile \
+      --replace /usr/include/elfutils $elfutils/include/elfutils
+
+    for x in util/build-id.c util/dso.c; do
+      substituteInPlace $x --replace /usr/lib/debug /run/current-system/sw/lib/debug
+    done
+
     [ -f bash_completion ] && sed -i 's,^have perf,_have perf,' bash_completion
-    export makeFlags="DESTDIR=$out $makeFlags"
+    export makeFlags="DESTDIR=$out WERROR=0 $makeFlags"
+    export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE -DTIPDIR=\"$out/share/doc/perf-tip\""
   '';
 
   # perf refers both to newt and slang
   nativeBuildInputs = [ asciidoc xmlto docbook_xsl docbook_xml_dtd_45 libxslt
       flex bison libiberty libaudit makeWrapper pkgconfig python perl ];
-  buildInputs = [ elfutils newt slang libunwind libbfd zlib ] ++
-    stdenv.lib.optional withGtk gtk2;
+  buildInputs =
+    [ elfutils newt slang libunwind libbfd zlib openssl systemtap.stapBuild numactl
+    ] ++ stdenv.lib.optional withGtk gtk2;
 
   # Note: we don't add elfutils to buildInputs, since it provides a
   # bad `ld' and other stuff.
@@ -39,6 +49,7 @@ stdenv.mkDerivation {
       "-Wno-error=unused-const-variable" "-Wno-error=misleading-indentation"
     ];
 
+  separateDebugInfo = true;
   installFlags = "install install-man ASCIIDOC8=1";
 
   preFixup = ''
diff --git a/pkgs/os-specific/linux/kernel/riscv-initrd-free.patch b/pkgs/os-specific/linux/kernel/riscv-initrd-free.patch
new file mode 100644
index 000000000000..680448385246
--- /dev/null
+++ b/pkgs/os-specific/linux/kernel/riscv-initrd-free.patch
@@ -0,0 +1,21 @@
+commit b1fbec8b74ace263ce1371e6bcfdd1dd71b52070
+Author: Shea Levy <shea@shealevy.com>
+Date:   Tue Feb 20 08:48:12 2018 -0500
+
+    riscv: Implement free_initrd_mem.
+    
+    v2: Remove incorrect page alignment.
+    
+    Signed-off-by: Shea Levy <shea@shealevy.com>
+
+diff --git a/arch/riscv/mm/init.c b/arch/riscv/mm/init.c
+index c77df8142be2..1b6daa5184e0 100644
+--- a/arch/riscv/mm/init.c
++++ b/arch/riscv/mm/init.c
+@@ -66,5 +66,6 @@ void free_initmem(void)
+ #ifdef CONFIG_BLK_DEV_INITRD
+ void free_initrd_mem(unsigned long start, unsigned long end)
+ {
++	free_reserved_area((void *)start, (void *)end, -1, "initrd");
+ }
+ #endif /* CONFIG_BLK_DEV_INITRD */
diff --git a/pkgs/os-specific/linux/kernel/riscv-initrd.patch b/pkgs/os-specific/linux/kernel/riscv-initrd.patch
new file mode 100644
index 000000000000..2313e7645843
--- /dev/null
+++ b/pkgs/os-specific/linux/kernel/riscv-initrd.patch
@@ -0,0 +1,48 @@
+commit 1e5f6473492f41355289d022003a049ebf8995fa
+Author: Shea Levy <shea@shealevy.com>
+Date:   Tue Feb 20 07:52:14 2018 -0500
+
+    riscv: Respect the initrd found in the dt, if any.
+    
+    Signed-off-by: Shea Levy <shea@shealevy.com>
+
+diff --git a/arch/riscv/kernel/setup.c b/arch/riscv/kernel/setup.c
+index 41d34008faf6..c4ebc907af34 100644
+--- a/arch/riscv/kernel/setup.c
++++ b/arch/riscv/kernel/setup.c
+@@ -88,15 +88,20 @@ static void __init setup_initrd(void)
+ 	extern unsigned long __initramfs_size;
+ 	unsigned long size;
+ 
++	if (initrd_start)
++		goto found;
++
+ 	if (__initramfs_size > 0) {
+ 		initrd_start = (unsigned long)(&__initramfs_start);
+ 		initrd_end = initrd_start + __initramfs_size;
+ 	}
+ 
++	initrd_below_start_ok = 1;
+ 	if (initrd_start >= initrd_end) {
+ 		printk(KERN_INFO "initrd not found or empty");
+ 		goto disable;
+ 	}
++found:
+ 	if (__pa(initrd_end) > PFN_PHYS(max_low_pfn)) {
+ 		printk(KERN_ERR "initrd extends beyond end of memory");
+ 		goto disable;
+@@ -104,13 +109,13 @@ static void __init setup_initrd(void)
+ 
+ 	size =  initrd_end - initrd_start;
+ 	memblock_reserve(__pa(initrd_start), size);
+-	initrd_below_start_ok = 1;
+ 
+ 	printk(KERN_INFO "Initial ramdisk at: 0x%p (%lu bytes)\n",
+ 		(void *)(initrd_start), size);
+ 	return;
+ disable:
+ 	pr_cont(" - disabling initrd\n");
++	initrd_below_start_ok = 0;
+ 	initrd_start = 0;
+ 	initrd_end = 0;
+ }
diff --git a/pkgs/os-specific/linux/kernel/riscv-install.patch b/pkgs/os-specific/linux/kernel/riscv-install.patch
new file mode 100644
index 000000000000..707230e9a336
--- /dev/null
+++ b/pkgs/os-specific/linux/kernel/riscv-install.patch
@@ -0,0 +1,65 @@
+commit 365fc1312f4911bfae25c5914c398f9aca21948f
+Author: Shea Levy <shea@shealevy.com>
+Date:   Mon Feb 19 10:50:58 2018 -0500
+
+    riscv: Add install target to Makefile.
+    
+    Signed-off-by: Shea Levy <shea@shealevy.com>
+
+diff --git a/arch/riscv/Makefile b/arch/riscv/Makefile
+index 6719dd30ec5b..26892daefa05 100644
+--- a/arch/riscv/Makefile
++++ b/arch/riscv/Makefile
+@@ -70,3 +70,7 @@ core-y += arch/riscv/kernel/ arch/riscv/mm/
+ libs-y += arch/riscv/lib/
+ 
+ all: vmlinux
++
++PHONY += install
++install: vmlinux
++	sh $(srctree)/arch/riscv/install.sh $(KERNELRELEASE) $< System.map "$(INSTALL_PATH)"
+diff --git a/arch/riscv/install.sh b/arch/riscv/install.sh
+new file mode 100644
+index 000000000000..8b3155a11a4a
+--- /dev/null
++++ b/arch/riscv/install.sh
+@@ -0,0 +1,39 @@
++#!/bin/sh
++#
++# arch/riscv/install.sh
++#
++# This file is subject to the terms and conditions of the GNU General Public
++# License.  See the file "COPYING" in the main directory of this archive
++# for more details.
++#
++# Copyright (C) 1995 by Linus Torvalds
++#
++# Adapted from code in arch/ia64/Makefile by Shea Levy
++#
++# "make install" script for riscv architecture
++#
++# Arguments:
++#   $1 - kernel version
++#   $2 - kernel image file
++#   $3 - kernel map file
++#   $4 - default install path (blank if root directory)
++#
++
++# User may have a custom install script
++
++if [ -x ~/bin/${INSTALLKERNEL} ]; then exec ~/bin/${INSTALLKERNEL} "$@"; fi
++if [ -x /sbin/${INSTALLKERNEL} ]; then exec /sbin/${INSTALLKERNEL} "$@"; fi
++
++# Default install - no bootloader configuration (yet?)
++base=$(basename $2)
++
++if [ -f $4/$base ]; then
++	mv $4/$base $4/$base.old
++fi
++
++if [ -f $4/System.map ]; then
++	mv $4/System.map $4/System.old
++fi
++
++cat $2 > $4/$base
++cp $3 $4/System.map
diff --git a/pkgs/os-specific/linux/kernel/riscv-irq-busy.patch b/pkgs/os-specific/linux/kernel/riscv-irq-busy.patch
new file mode 100644
index 000000000000..5f5e8f0c8b7b
--- /dev/null
+++ b/pkgs/os-specific/linux/kernel/riscv-irq-busy.patch
@@ -0,0 +1,42 @@
+commit 2603e6087b26e9428b806b267aee6bcb919abcea
+Author: Shea Levy <shea@shealevy.com>
+Date:   Sun Feb 18 20:08:30 2018 -0500
+
+    set_handle_irq: Return EBUSY if the handler has already been registered.
+    
+    This is what's expected by the comments and at least by irq-riscv-intc.c
+    
+    Signed-off-by: Shea Levy <shea@shealevy.com>
+
+diff --git a/include/linux/irq.h b/include/linux/irq.h
+index 2930fd2572e4..77e97872a13e 100644
+--- a/include/linux/irq.h
++++ b/include/linux/irq.h
+@@ -1179,7 +1179,7 @@ int ipi_send_mask(unsigned int virq, const struct cpumask *dest);
+  * Returns 0 on success, or -EBUSY if an IRQ handler has already been
+  * registered.
+  */
+-void __init set_handle_irq(void (*handle_irq)(struct pt_regs *));
++int __init set_handle_irq(void (*handle_irq)(struct pt_regs *));
+ 
+ /*
+  * Allows interrupt handlers to find the irqchip that's been registered as the
+diff --git a/kernel/irq/handle.c b/kernel/irq/handle.c
+index dee4f9a172ca..3570c715c3e7 100644
+--- a/kernel/irq/handle.c
++++ b/kernel/irq/handle.c
+@@ -213,11 +213,12 @@ irqreturn_t handle_irq_event(struct irq_desc *desc)
+ }
+ 
+ #ifdef CONFIG_GENERIC_IRQ_MULTI_HANDLER
+-void __init set_handle_irq(void (*handle_irq)(struct pt_regs *))
++int __init set_handle_irq(void (*handle_irq)(struct pt_regs *))
+ {
+ 	if (handle_arch_irq)
+-		return;
++		return -EBUSY;
+ 
+ 	handle_arch_irq = handle_irq;
++	return 0;
+ }
+ #endif
diff --git a/pkgs/os-specific/linux/kernel/riscv-modules.patch b/pkgs/os-specific/linux/kernel/riscv-modules.patch
new file mode 100644
index 000000000000..6d5356e0e46f
--- /dev/null
+++ b/pkgs/os-specific/linux/kernel/riscv-modules.patch
@@ -0,0 +1,11 @@
+diff -Naur linux-4.15.4-orig/arch/riscv/configs/defconfig linux-4.15.4/arch/riscv/configs/defconfig
+--- linux-4.15.4-orig/arch/riscv/configs/defconfig	2018-02-16 14:07:01.000000000 -0500
++++ linux-4.15.4/arch/riscv/configs/defconfig	2018-02-18 18:33:09.488431900 -0500
+@@ -12,6 +12,7 @@
+ CONFIG_NAMESPACES=y
+ CONFIG_USER_NS=y
+ CONFIG_BLK_DEV_INITRD=y
++CONFIG_MODULES=y
+ CONFIG_EXPERT=y
+ CONFIG_CHECKPOINT_RESTORE=y
+ CONFIG_BPF_SYSCALL=y
diff --git a/pkgs/os-specific/linux/kernel/update.sh b/pkgs/os-specific/linux/kernel/update.sh
index d9db7f9f916c..878c3c14fe47 100755
--- a/pkgs/os-specific/linux/kernel/update.sh
+++ b/pkgs/os-specific/linux/kernel/update.sh
@@ -50,13 +50,13 @@ ls $NIXPKGS/pkgs/os-specific/linux/kernel | while read FILE; do
   # Rewrite the expression
   sed -i -e '/version = /d' -e '/modDirVersion = /d' $NIXPKGS/pkgs/os-specific/linux/kernel/$FILE
   if grep -q '^[0-9]\+.[0-9]\+$' <<< "$V"; then
-    sed -i "\#import ./generic.nix (args // rec {#a \  modDirVersion = \"${V}.0\";" $NIXPKGS/pkgs/os-specific/linux/kernel/$FILE
+    sed -i "\#buildLinux (args // rec {#a \  modDirVersion = \"${V}.0\";" $NIXPKGS/pkgs/os-specific/linux/kernel/$FILE
   fi
-  sed -i "\#import ./generic.nix (args // rec {#a \  version = \"$V\";" $NIXPKGS/pkgs/os-specific/linux/kernel/$FILE
+  sed -i "\#buildLinux (args // rec {#a \  version = \"$V\";" $NIXPKGS/pkgs/os-specific/linux/kernel/$FILE
 
   # Commit the changes
   git add -u $NIXPKGS/pkgs/os-specific/linux/kernel/$FILE
   git commit -m "kernel: $OLDVER -> $V" >/dev/null 2>&1
-  
+
   echo "Updated $OLDVER -> $V"
 done
diff --git a/pkgs/os-specific/linux/kexectools/default.nix b/pkgs/os-specific/linux/kexectools/default.nix
index 021353c47091..c4c5b7cc3b91 100644
--- a/pkgs/os-specific/linux/kexectools/default.nix
+++ b/pkgs/os-specific/linux/kexectools/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, zlib }:
+{ stdenv, buildPackages, fetchurl, zlib }:
 
 stdenv.mkDerivation rec {
   name = "kexec-tools-${version}";
@@ -14,6 +14,8 @@ stdenv.mkDerivation rec {
 
   hardeningDisable = [ "format" "pic" "relro" ];
 
+  configureFlags = [ "BUILD_CC=${buildPackages.stdenv.cc.targetPrefix}cc" ];
+  nativeBuildInputs = [ buildPackages.stdenv.cc ];
   buildInputs = [ zlib ];
 
   meta = with stdenv.lib; {
diff --git a/pkgs/os-specific/linux/libcap/default.nix b/pkgs/os-specific/linux/libcap/default.nix
index 17cd40e427b9..f00d6272902d 100644
--- a/pkgs/os-specific/linux/libcap/default.nix
+++ b/pkgs/os-specific/linux/libcap/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, attr, perl, pam ? null }:
+{ stdenv, buildPackages, fetchurl, attr, perl, pam ? null }:
 assert pam != null -> stdenv.isLinux;
 
 stdenv.mkDerivation rec {
@@ -13,6 +13,7 @@ stdenv.mkDerivation rec {
   outputs = [ "out" "dev" "lib" "man" "doc" ]
     ++ stdenv.lib.optional (pam != null) "pam";
 
+  depsBuildBuild = [ buildPackages.stdenv.cc ];
   nativeBuildInputs = [ perl ];
 
   buildInputs = [ pam ];
@@ -22,6 +23,8 @@ stdenv.mkDerivation rec {
   makeFlags = [
     "lib=lib"
     (stdenv.lib.optional (pam != null) "PAM_CAP=yes")
+    "BUILD_CC=$(CC_FOR_BUILD)"
+    "CC:=$(CC)"
   ];
 
   prePatch = ''
diff --git a/pkgs/os-specific/linux/libnl/default.nix b/pkgs/os-specific/linux/libnl/default.nix
index 81a3af54628e..f66df8163ff1 100644
--- a/pkgs/os-specific/linux/libnl/default.nix
+++ b/pkgs/os-specific/linux/libnl/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, lib, fetchFromGitHub, autoreconfHook, bison, flex, pkgconfig }:
+{ stdenv, lib, fetchFromGitHub, fetchpatch, autoreconfHook, bison, flex, pkgconfig }:
 
 let version = "3.3.0"; in
 stdenv.mkDerivation {
@@ -13,6 +13,12 @@ stdenv.mkDerivation {
 
   outputs = [ "bin" "dev" "out" "man" ];
 
+  patches = stdenv.lib.optional stdenv.hostPlatform.isMusl
+    (fetchpatch {
+      url = "https://raw.githubusercontent.com/gentoo/musl/48d2a28710ae40877fd3e178ead1fb1bb0baa62c/dev-libs/libnl/files/libnl-3.3.0_rc1-musl.patch";
+      sha256 = "0dd7xxikib201i99k2if066hh7gwf2i4ffckrjplq6lr206jn00r";
+    });
+
   nativeBuildInputs = [ autoreconfHook bison flex pkgconfig ];
 
   meta = with lib; {
diff --git a/pkgs/os-specific/linux/libsepol/default.nix b/pkgs/os-specific/linux/libsepol/default.nix
index 0417bf59cfa3..f7f393afb39d 100644
--- a/pkgs/os-specific/linux/libsepol/default.nix
+++ b/pkgs/os-specific/linux/libsepol/default.nix
@@ -18,6 +18,8 @@ stdenv.mkDerivation rec {
     makeFlagsArray+=("DESTDIR=$out")
   '';
 
+  NIX_CFLAGS_COMPILE = [ "-Wno-error=implicit-fallthrough" ];
+
   passthru = { inherit se_release se_url; };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/os-specific/linux/lm-sensors/default.nix b/pkgs/os-specific/linux/lm-sensors/default.nix
index 066946d8f0bc..4f35d5465383 100644
--- a/pkgs/os-specific/linux/lm-sensors/default.nix
+++ b/pkgs/os-specific/linux/lm-sensors/default.nix
@@ -12,7 +12,7 @@ stdenv.mkDerivation rec {
   src = fetchurl {
     urls = [
       "http://dl.lm-sensors.org/lm-sensors/releases/lm_sensors-${version}.tar.bz2"
-      "http://pkgs.fedoraproject.org/repo/pkgs/lm_sensors/lm_sensors-${version}.tar.bz2/c03675ae9d43d60322110c679416901a/lm_sensors-${version}.tar.bz2"
+      "http://src.fedoraproject.org/repo/pkgs/lm_sensors/lm_sensors-${version}.tar.bz2/c03675ae9d43d60322110c679416901a/lm_sensors-${version}.tar.bz2"
     ];
     sha256 = "07q6811l4pp0f7pxr8bk3s97ippb84mx5qdg7v92s9hs10b90mz0";
   };
@@ -20,6 +20,8 @@ stdenv.mkDerivation rec {
   buildInputs = [ bison flex which perl ]
    ++ stdenv.lib.optional sensord rrdtool;
 
+  patches = [ ./musl-fix-includes.patch ];
+
   preBuild = ''
     makeFlagsArray=(PREFIX=$out ETCDIR=$out/etc
     ${stdenv.lib.optionalString sensord "PROG_EXTRA=sensord"})
diff --git a/pkgs/os-specific/linux/lm-sensors/musl-fix-includes.patch b/pkgs/os-specific/linux/lm-sensors/musl-fix-includes.patch
new file mode 100644
index 000000000000..501f2dd762c6
--- /dev/null
+++ b/pkgs/os-specific/linux/lm-sensors/musl-fix-includes.patch
@@ -0,0 +1,62 @@
+--- lm_sensors-3.3.4.orig/prog/dump/isadump.c
++++ lm_sensors-3.3.4/prog/dump/isadump.c
+@@ -36,13 +36,7 @@
+ #include "util.h"
+ #include "superio.h"
+ 
+-
+-/* To keep glibc2 happy */
+-#if defined(__GLIBC__) && __GLIBC__ == 2 && __GLIBC_MINOR__ >= 0
+ #include <sys/io.h>
+-#else
+-#include <asm/io.h>
+-#endif
+ 
+ #ifdef __powerpc__
+ unsigned long isa_io_base = 0; /* XXX for now */
+--- lm_sensors-3.3.4.orig/prog/dump/isaset.c
++++ lm_sensors-3.3.4/prog/dump/isaset.c
+@@ -32,13 +32,7 @@
+ #include <string.h>
+ #include "util.h"
+ 
+-
+-/* To keep glibc2 happy */
+-#if defined(__GLIBC__) && __GLIBC__ == 2 && __GLIBC_MINOR__ >= 0
+ #include <sys/io.h>
+-#else
+-#include <asm/io.h>
+-#endif
+ 
+ #ifdef __powerpc__
+ unsigned long isa_io_base = 0; /* XXX for now */
+--- lm_sensors-3.3.4.orig/prog/dump/superio.c
++++ lm_sensors-3.3.4/prog/dump/superio.c
+@@ -20,12 +20,7 @@
+ */
+ 
+ #include <stdlib.h>
+-
+-#if defined(__GLIBC__) && __GLIBC__ == 2 && __GLIBC_MINOR__ >= 0
+ #include <sys/io.h>
+-#else
+-#include <asm/io.h>
+-#endif
+ 
+ #include "superio.h"
+ 
+--- lm_sensors-3.3.4.orig/prog/dump/util.c
++++ lm_sensors-3.3.4/prog/dump/util.c
+@@ -11,12 +11,7 @@
+ #include <stdio.h>
+ #include "util.h"
+ 
+-/* To keep glibc2 happy */
+-#if defined(__GLIBC__) && __GLIBC__ == 2 && __GLIBC_MINOR__ >= 0
+ #include <sys/io.h>
+-#else
+-#include <asm/io.h>
+-#endif
+ 
+ /* Return 1 if we should continue, 0 if we should abort */
+ int user_ack(int def)
diff --git a/pkgs/os-specific/linux/lvm2/default.nix b/pkgs/os-specific/linux/lvm2/default.nix
index d6c1504fdf44..bd84e121a7d6 100644
--- a/pkgs/os-specific/linux/lvm2/default.nix
+++ b/pkgs/os-specific/linux/lvm2/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, pkgconfig, systemd, libudev, utillinux, coreutils, libuuid
+{ stdenv, fetchurl, fetchpatch, pkgconfig, systemd, libudev, utillinux, coreutils, libuuid
 , thin-provisioning-tools, enable_dmeventd ? false }:
 
 let
@@ -41,6 +41,23 @@ stdenv.mkDerivation {
   enableParallelBuilding = true;
 
   #patches = [ ./purity.patch ];
+  patches = stdenv.lib.optionals stdenv.hostPlatform.isMusl [
+    (fetchpatch {
+      name = "fix-stdio-usage.patch";
+      url = "https://git.alpinelinux.org/cgit/aports/plain/main/lvm2/fix-stdio-usage.patch?h=3.7-stable&id=31bd4a8c2dc00ae79a821f6fe0ad2f23e1534f50";
+      sha256 = "0m6wr6qrvxqi2d2h054cnv974jq1v65lqxy05g1znz946ga73k3p";
+    })
+    (fetchpatch {
+      name = "mallinfo.patch";
+      url = "https://git.alpinelinux.org/cgit/aports/plain/main/lvm2/mallinfo.patch?h=3.7-stable&id=31bd4a8c2dc00ae79a821f6fe0ad2f23e1534f50";
+      sha256 = "0g6wlqi215i5s30bnbkn8w7axrs27y3bnygbpbnf64wwx7rxxlj0";
+    })
+    (fetchpatch {
+      name = "mlockall-default-config.patch";
+      url = "https://git.alpinelinux.org/cgit/aports/plain/main/lvm2/mlockall-default-config.patch?h=3.7-stable&id=31bd4a8c2dc00ae79a821f6fe0ad2f23e1534f50";
+      sha256 = "1ivbj3sphgf8n1ykfiv5rbw7s8dgnj5jcr9jl2v8cwf28lkacw5l";
+    })
+  ];
 
   # To prevent make install from failing.
   preInstall = "installFlags=\"OWNER= GROUP= confdir=$out/etc\"";
diff --git a/pkgs/os-specific/linux/musl/default.nix b/pkgs/os-specific/linux/musl/default.nix
index aaef5315b0f0..f74ac9c41eee 100644
--- a/pkgs/os-specific/linux/musl/default.nix
+++ b/pkgs/os-specific/linux/musl/default.nix
@@ -1,11 +1,29 @@
-{ stdenv, fetchurl, fetchpatch }:
+{ stdenv, lib, fetchurl
+, buildPackages
+, linuxHeaders ? null
+, useBSDCompatHeaders ? true
+}:
+let
+  cdefs_h = fetchurl {
+    url = "http://git.alpinelinux.org/cgit/aports/plain/main/libc-dev/sys-cdefs.h";
+    sha256 = "16l3dqnfq0f20rzbkhc38v74nqcsh9n3f343bpczqq8b1rz6vfrh";
+  };
+  queue_h = fetchurl {
+    url = "http://git.alpinelinux.org/cgit/aports/plain/main/libc-dev/sys-queue.h";
+    sha256 = "12qm82id7zys92a1qh2l1qf2wqgq6jr4qlbjmqyfffz3s3nhfd61";
+  };
+  tree_h = fetchurl {
+    url = "http://git.alpinelinux.org/cgit/aports/plain/main/libc-dev/sys-tree.h";
+    sha256 = "14igk6k00bnpfw660qhswagyhvr0gfqg4q55dxvaaq7ikfkrir71";
+  };
 
+in
 stdenv.mkDerivation rec {
   name    = "musl-${version}";
   version = "1.1.18";
 
   src = fetchurl {
-    url    = "http://www.musl-libc.org/releases/${name}.tar.gz";
+    url    = "http://www.musl-libc.org/releases/musl-${version}.tar.gz";
     sha256 = "0651lnj5spckqjf83nz116s8qhhydgqdy3rkl4icbh5f05fyw5yh";
   };
 
@@ -23,15 +41,40 @@ stdenv.mkDerivation rec {
     "--enable-shared"
     "--enable-static"
     "CFLAGS=-fstack-protector-strong"
+    # Fix cycle between outputs
+    "--disable-wrapper"
   ];
 
+  outputs = [ "out" "dev" ];
+
+  patches = [ ./few-more-uapi-fixes.patch ];
+
   dontDisableStatic = true;
+  dontStrip = true;
+
+  postInstall =
+  ''
+    # Not sure why, but link in all but scsi directory as that's what uclibc/glibc do.
+    # Apparently glibc provides scsi itself?
+    (cd $dev/include && ln -s $(ls -d ${linuxHeaders}/include/* | grep -v "scsi$") .)
+  '' +
+  ''
+    mkdir -p $out/bin
+    # Create 'ldd' symlink, builtin
+    ln -s $out/lib/libc.so $out/bin/ldd
+  '' + lib.optionalString useBSDCompatHeaders ''
+    install -D ${queue_h} $dev/include/sys/queue.h
+    install -D ${cdefs_h} $dev/include/sys/cdefs.h
+    install -D ${tree_h} $dev/include/sys/tree.h
+  '';
+
+  passthru.linuxHeaders = linuxHeaders;
 
   meta = {
     description = "An efficient, small, quality libc implementation";
     homepage    = "http://www.musl-libc.org";
-    license     = stdenv.lib.licenses.mit;
-    platforms   = stdenv.lib.platforms.linux;
-    maintainers = [ stdenv.lib.maintainers.thoughtpolice ];
+    license     = lib.licenses.mit;
+    platforms   = lib.platforms.linux;
+    maintainers = [ lib.maintainers.thoughtpolice ];
   };
 }
diff --git a/pkgs/os-specific/linux/musl/few-more-uapi-fixes.patch b/pkgs/os-specific/linux/musl/few-more-uapi-fixes.patch
new file mode 100644
index 000000000000..f84ca2c5aec8
--- /dev/null
+++ b/pkgs/os-specific/linux/musl/few-more-uapi-fixes.patch
@@ -0,0 +1,71 @@
+http://www.openwall.com/lists/musl/2018/01/06/3
+
+Date: Sat,  6 Jan 2018 23:32:52 +0100
+From: Hauke Mehrtens <hauke@...ke-m.de>
+To: musl@...ts.openwall.com
+Cc: felix.janda@...teo.de,
+	Hauke Mehrtens <hauke@...ke-m.de>
+Subject: [PATCH v2] Add additional uapi guards for Linux kernel header files
+
+With Linux kernel 4.16 it will be possible to guard more parts of the
+Linux header files from a libc. Make use of this in musl to guard all
+the structures and other definitions from the Linux header files which
+are also defined by the header files provided by musl. This will make
+musl compile with the unmodified Linux kernel user space headers.
+
+This extends the definitions done in commit 04983f227238 ("make
+netinet/in.h suppress clashing definitions from kernel headers")
+
+The needed patches were recently accepted into the netdev tree and will be integrated in Linux 4.16:
+https://patchwork.ozlabs.org/patch/854342/
+https://patchwork.ozlabs.org/patch/855293/
+---
+ include/net/if.h           | 7 +++++++
+ include/netinet/if_ether.h | 1 +
+ include/sys/xattr.h        | 2 ++
+ 3 files changed, 10 insertions(+)
+
+diff --git a/include/net/if.h b/include/net/if.h
+index 2f2fcc10..0ee48cd7 100644
+--- a/include/net/if.h
++++ b/include/net/if.h
+@@ -125,6 +125,13 @@ struct ifconf {
+ #define ifc_req		ifc_ifcu.ifcu_req
+ #define _IOT_ifconf _IOT(_IOTS(struct ifconf),1,0,0,0,0)
+ 
++#define __UAPI_DEF_IF_IFCONF					0
++#define __UAPI_DEF_IF_IFMAP					0
++#define __UAPI_DEF_IF_IFNAMSIZ					0
++#define __UAPI_DEF_IF_IFREQ					0
++#define __UAPI_DEF_IF_NET_DEVICE_FLAGS				0
++#define __UAPI_DEF_IF_NET_DEVICE_FLAGS_LOWER_UP_DORMANT_ECHO	0
++
+ #endif
+ 
+ #ifdef __cplusplus
+diff --git a/include/netinet/if_ether.h b/include/netinet/if_ether.h
+index d9a131aa..c2c6e944 100644
+--- a/include/netinet/if_ether.h
++++ b/include/netinet/if_ether.h
+@@ -133,5 +133,6 @@ do { \
+ 	(enaddr)[5] = ((uint8_t *)ipaddr)[3]; \
+ } while(0)
+ 
++#define __UAPI_DEF_ETHHDR	0
+ 
+ #endif
+diff --git a/include/sys/xattr.h b/include/sys/xattr.h
+index 6479fcc6..52e3dd89 100644
+--- a/include/sys/xattr.h
++++ b/include/sys/xattr.h
+@@ -24,6 +24,8 @@ int removexattr(const char *, const char *);
+ int lremovexattr(const char *, const char *);
+ int fremovexattr(int, const char *);
+ 
++#define __UAPI_DEF_XATTR	0
++
+ #ifdef __cplusplus
+ }
+ #endif
+-- 
+2.11.0
diff --git a/pkgs/os-specific/linux/musl/fts.nix b/pkgs/os-specific/linux/musl/fts.nix
new file mode 100644
index 000000000000..083541e5e935
--- /dev/null
+++ b/pkgs/os-specific/linux/musl/fts.nix
@@ -0,0 +1,14 @@
+{ stdenv, fetchFromGitHub, autoreconfHook, pkgconfig }:
+
+stdenv.mkDerivation rec {
+  name = "musl-fts-${version}";
+  version = "2017-01-13";
+  src = fetchFromGitHub {
+    owner = "pullmoll";
+    repo = "musl-fts";
+    rev = "0bde52df588e8969879a2cae51c3a4774ec62472";
+    sha256 = "1q8cpzisziysrs08b89wj0rm4p6dsyl177cclpfa0f7spjm3jg03";
+  };
+
+  nativeBuildInputs = [ autoreconfHook pkgconfig ];
+}
diff --git a/pkgs/os-specific/linux/musl/getconf.nix b/pkgs/os-specific/linux/musl/getconf.nix
new file mode 100644
index 000000000000..dbfaca296bf9
--- /dev/null
+++ b/pkgs/os-specific/linux/musl/getconf.nix
@@ -0,0 +1,19 @@
+{ stdenv, fetchurl }:
+
+stdenv.mkDerivation {
+  name = "musl-getconf";
+  src = fetchurl {
+    url = "https://raw.githubusercontent.com/alpinelinux/aports/48b16204aeeda5bc1f87e49c6b8e23d9abb07c73/main/musl/getconf.c";
+    sha256 = "0z14ml5343p5gapxw9fnbn2r72r7v2gk8662iifjrblh6sxhqzfq";
+  };
+
+  unpackPhase = ":";
+
+  buildPhase = ''$CC $src -o getconf'';
+  installPhase = ''
+    mkdir -p $out/bin
+    cp getconf $out/bin/
+  '';
+}
+
+
diff --git a/pkgs/os-specific/linux/musl/getent.nix b/pkgs/os-specific/linux/musl/getent.nix
new file mode 100644
index 000000000000..6eed17a76b02
--- /dev/null
+++ b/pkgs/os-specific/linux/musl/getent.nix
@@ -0,0 +1,18 @@
+{ stdenv, fetchurl }:
+
+stdenv.mkDerivation {
+  name = "musl-getent";
+  src = fetchurl {
+    url = "https://raw.githubusercontent.com/alpinelinux/aports/89a718d88ec7466e721f3bbe9ede5ffe58061d78/main/musl/getent.c";
+    sha256 = "0b4jqnsmv1hjgcz7db3vd61k682aphl59c3yhwya2q7mkc6g48xk";
+  };
+
+  unpackPhase = ":";
+
+  buildPhase = ''$CC $src -o getent'';
+  installPhase = ''
+    mkdir -p $out/bin
+    cp getent $out/bin/
+  '';
+}
+
diff --git a/pkgs/os-specific/linux/numactl/default.nix b/pkgs/os-specific/linux/numactl/default.nix
index a5ed242e3230..9928897ae4d4 100644
--- a/pkgs/os-specific/linux/numactl/default.nix
+++ b/pkgs/os-specific/linux/numactl/default.nix
@@ -1,15 +1,28 @@
-{ stdenv, fetchurl, autoreconfHook }:
+{ stdenv, fetchFromGitHub, fetchpatch, autoreconfHook }:
 
 stdenv.mkDerivation rec {
-  name = "numactl-2.0.10";
+  name = "numactl-${version}";
+  version = "2.0.11";
 
-  src = fetchurl {
-    url = "ftp://oss.sgi.com/www/projects/libnuma/download/${name}.tar.gz";
-    sha256 = "0qfv2ks6d3gm0mw5sj4cbhsd7cbsb7qm58xvchl2wfzifkzcinnv";
+  src = fetchFromGitHub {
+    owner = "numactl";
+    repo = "numactl";
+    rev = "v${version}";
+    sha256 = "0bcffqawwbyrnza8np0whii25mfd0dria35zal9v3l55xcrya3j9";
   };
 
   nativeBuildInputs = [ autoreconfHook ];
 
+  patches = [
+    (fetchpatch {
+      url = https://raw.githubusercontent.com/gentoo/gentoo/b64d15e731e3d6a7671f0ec6c34a20203cf2609d/sys-process/numactl/files/numactl-2.0.11-sysmacros.patch;
+      sha256 = "05277kv3x12n2xlh3fgnmxclxfc384mkwb0v9pd91046khj6h843";
+    })
+  ] ++ stdenv.lib.optional stdenv.hostPlatform.isMusl (fetchpatch {
+      url = https://git.alpinelinux.org/cgit/aports/plain/testing/numactl/musl.patch?id=0592b128c71c3e70d493bc7a13caed0d7fae91dd;
+      sha256 = "080b0sygmg7104qbbh1amh3b322yyiajwi2d3d0vayffgva0720v";
+    });
+
   meta = with stdenv.lib; {
     description = "Library and tools for non-uniform memory access (NUMA) machines";
     homepage = http://oss.sgi.com/projects/libnuma/;
diff --git a/pkgs/os-specific/linux/nvidia-x11/default.nix b/pkgs/os-specific/linux/nvidia-x11/default.nix
index a4d1629a6841..d0348bd67d45 100644
--- a/pkgs/os-specific/linux/nvidia-x11/default.nix
+++ b/pkgs/os-specific/linux/nvidia-x11/default.nix
@@ -14,7 +14,7 @@ let
         sha256 = "18clfpw03g8dxm61bmdkmccyaxir3gnq451z6xqa2ilm3j820aa5";
       });
 in
-{
+rec {
   # Policy: use the highest stable version as the default (on our master).
   stable = generic {
     version = "390.25";
@@ -24,13 +24,7 @@ in
     persistencedSha256 = "033azbhi50f1b0lw759sncgf7ckh2m2c0khj5v15sch9kl1fzk8i";
   };
 
-  beta = generic {
-    version = "381.22";
-    sha256_32bit = "024x3c6hrivg2bkbzv1xd0585hvpa2kbn1y2gwvca7c73kpdczbv";
-    sha256_64bit = "13fj9ndy5rmh410d0vi2b0crfl7rbsm6rn7cwms0frdzkyhshghs";
-    settingsSha256 = "1gls187zfd201b29qfvwvqvl5gvp5wl9lq966vd28crwqh174jrh";
-    persistencedSha256 = "08315rb9l932fgvy758an5vh3jgks0qc4g36xip4l32pkxd9k963";
-  };
+  beta = stable; # not enough interest to maintain beta ATM
 
 
   legacy_340 = generic {
diff --git a/pkgs/os-specific/linux/openvswitch/default.nix b/pkgs/os-specific/linux/openvswitch/default.nix
index 4b5e7bbf3e3d..ac8a1c7de4a8 100644
--- a/pkgs/os-specific/linux/openvswitch/default.nix
+++ b/pkgs/os-specific/linux/openvswitch/default.nix
@@ -7,12 +7,12 @@ with stdenv.lib;
 let
   _kernel = kernel;
 in stdenv.mkDerivation rec {
-  version = "2.5.2";
+  version = "2.5.4";
   name = "openvswitch-${version}";
 
   src = fetchurl {
     url = "http://openvswitch.org/releases/${name}.tar.gz";
-    sha256 = "0ifx758zl97dpad9vpd5i5dqj6i03k632mvgxs82hqkcsb3r6y7q";
+    sha256 = "1lji87wg953lqcdf02f1zv2m54vhd2x9jd03bb91lnlb4qlhifiv";
   };
 
   kernel = optional (_kernel != null) _kernel.dev;
diff --git a/pkgs/os-specific/linux/pam/default.nix b/pkgs/os-specific/linux/pam/default.nix
index 3de7916bff69..5f92dfcc8390 100644
--- a/pkgs/os-specific/linux/pam/default.nix
+++ b/pkgs/os-specific/linux/pam/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, flex, cracklib }:
+{ stdenv, buildPackages, hostPlatform, fetchurl, fetchpatch, flex, cracklib }:
 
 stdenv.mkDerivation rec {
   name = "linux-pam-${version}";
@@ -9,8 +9,24 @@ stdenv.mkDerivation rec {
     sha256 = "1fyi04d5nsh8ivd0rn2y0z83ylgc0licz7kifbb6xxi2ylgfs6i4";
   };
 
+  patches = stdenv.lib.optionals (hostPlatform.libc == "musl") [
+    (fetchpatch {
+      url = "https://git.alpinelinux.org/cgit/aports/plain/main/linux-pam/fix-compat.patch?id=05a62bda8ec255d7049a2bd4cf0fdc4b32bdb2cc";
+      sha256 = "1h5yp5h2mqp1fcwiwwklyfpa69a3i03ya32pivs60fd7g5bqa7sf";
+    })
+    (fetchpatch {
+      url = "https://git.alpinelinux.org/cgit/aports/plain/main/linux-pam/libpam-fix-build-with-eglibc-2.16.patch?id=05a62bda8ec255d7049a2bd4cf0fdc4b32bdb2cc";
+      sha256 = "1ib6shhvgzinjsc603k2x1lxh9dic6qq449fnk110gc359m23j81";
+    })
+    (fetchpatch {
+      url = "https://git.alpinelinux.org/cgit/aports/plain/main/linux-pam/musl-fix-pam_exec.patch?id=05a62bda8ec255d7049a2bd4cf0fdc4b32bdb2cc";
+      sha256 = "04dx6s9d8cxl40r7m7dc4si47ds4niaqm7902y1d6wcjvs11vrf0";
+    })
+  ];
+
   outputs = [ "out" "doc" "man" /* "modules" */ ];
 
+  depsBuildBuild = [ buildPackages.stdenv.cc ];
   nativeBuildInputs = [ flex ];
 
   buildInputs = [ cracklib ];
@@ -20,7 +36,7 @@ stdenv.mkDerivation rec {
   crossAttrs = {
     propagatedBuildInputs = [ flex.crossDrv cracklib.crossDrv ];
     preConfigure = preConfigure + ''
-      ar x ${flex.crossDrv}/lib/libfl.a
+      $crossConfig-ar x ${flex.crossDrv}/lib/libfl.a
       mv libyywrap.o libyywrap-target.o
       ar x ${flex}/lib/libfl.a
       mv libyywrap.o libyywrap-host.o
@@ -46,6 +62,12 @@ stdenv.mkDerivation rec {
 
   preConfigure = ''
     configureFlags="$configureFlags --includedir=$out/include/security"
+  '' + stdenv.lib.optionalString (hostPlatform.libc == "musl") ''
+      # export ac_cv_search_crypt=no
+      # (taken from Alpine linux, apparently insecure but also doesn't build O:))
+      # disable insecure modules
+      # sed -e 's/pam_rhosts//g' -i modules/Makefile.am
+      sed -e 's/pam_rhosts//g' -i modules/Makefile.in
   '';
 
   meta = {
diff --git a/pkgs/os-specific/linux/powertop/default.nix b/pkgs/os-specific/linux/powertop/default.nix
index 5a10f455ea06..7679262a9899 100644
--- a/pkgs/os-specific/linux/powertop/default.nix
+++ b/pkgs/os-specific/linux/powertop/default.nix
@@ -9,6 +9,8 @@ stdenv.mkDerivation rec {
     sha256 = "0l4jjlf05li2mc6g8nrss3h435wjhmnqd8m7v3kha3x0x7cbfzxa";
   };
 
+  outputs = [ "out" "man" ];
+
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ gettext libnl ncurses pciutils zlib ];
 
diff --git a/pkgs/os-specific/linux/reptyr/default.nix b/pkgs/os-specific/linux/reptyr/default.nix
index 779337e85f86..4b83e478dd1c 100644
--- a/pkgs/os-specific/linux/reptyr/default.nix
+++ b/pkgs/os-specific/linux/reptyr/default.nix
@@ -13,6 +13,9 @@ stdenv.mkDerivation rec {
     sed 1i'#include <sys/sysmacros.h>' -i platform/linux/linux.c
   '';
 
+  # Needed with GCC 7
+  NIX_CFLAGS_COMPILE = "-Wno-error=format-truncation";
+
   makeFlags = ["PREFIX=$(out)"];
   meta = {
     platforms = [ "i686-linux" "x86_64-linux" ];
diff --git a/pkgs/os-specific/linux/rtl8812au/default.nix b/pkgs/os-specific/linux/rtl8812au/default.nix
index c79de39d5dac..96306a9d5c6a 100644
--- a/pkgs/os-specific/linux/rtl8812au/default.nix
+++ b/pkgs/os-specific/linux/rtl8812au/default.nix
@@ -1,39 +1,20 @@
-{ stdenv, fetchFromGitHub, fetchpatch, kernel }:
+{ stdenv, fetchFromGitHub, fetchpatch, kernel, bc }:
 
 stdenv.mkDerivation rec {
   name = "rtl8812au-${kernel.version}-${version}";
-  version = "4.3.20";
+  version = "5.2.20_25672.20171213";
 
   src = fetchFromGitHub {
-    owner = "Grawp";
-    repo = "rtl8812au_rtl8821au";
-    rev = "d716b38abf5ca7da72d2be0adfcebe98cceeda8f";
-    sha256 = "01z5p2vps3an69bbzca7ig14llc5rd6067pgs47kkhfjbsbws4ry";
+    owner = "zebulon2";
+    repo = "rtl8812au-driver-5.2.20";
+    rev = "aca1e0677bfe56c6c4914358df007c97486e7095";
+    sha256 = "19av8fkh3mvs2f57iibrg0cfyhjnnx4cbnfzv5aj7v5gb0j3dp0p";
   };
 
-  patches = [
-    (fetchpatch { # From PR # 42
-      name = "rtl8812au-4.11.x-fix.patch";
-      url = https://github.com/Grawp/rtl8812au_rtl8821au/commit/3224e74ad9c230b74a658e80dad66ab95c9e2ef5.patch;
-      sha256 = "12g4yvivg4d0qm5cgxs7k54p3y7h1dc2jw6rp1xbppwf3j1z6xks";
-    })
-    (fetchpatch { # From PR #46
-      name = "rtl8812au-4.11.9-fix.patch";
-      url = https://github.com/Grawp/rtl8812au_rtl8821au/commit/58fc45a4511b8b9d6b52813168e3eee657517b1f.patch;
-      sha256 = "18bag2mif5112lap2xvx2bb0wxrd13f9y9cwqv1qzp5nyqiniziz";
-    })
-    (fetchpatch { # From PR #43
-      name = "rtl8812au-4.12-fix.patch";
-      url = https://github.com/Grawp/rtl8812au_rtl8821au/commit/a5475c9f1f54099ca35c8680f2dedee11fa9edec.patch;
-      sha256 = "01xa51whq1xa0sh3y2bhm65f0cryzmv46v530axqjrpnd924432d";
-    })
-  ];
-
+  nativeBuildInputs = [ bc ];
   buildInputs = kernel.moduleBuildDependencies;
 
-  hardeningDisable = [ "pic" ];
-
-  NIX_CFLAGS_COMPILE="-Wno-error=incompatible-pointer-types";
+  hardeningDisable = [ "pic" "format" ];
 
   prePatch = ''
     substituteInPlace ./Makefile --replace /lib/modules/ "${kernel.dev}/lib/modules/"
@@ -46,10 +27,11 @@ stdenv.mkDerivation rec {
     mkdir -p "$out/lib/modules/${kernel.modDirVersion}/kernel/net/wireless/"
   '';
 
-  meta = {
+  meta = with stdenv.lib; {
     description = "Driver for Realtek 802.11ac, rtl8812au, provides the 8812au mod";
-    homepage = https://github.com/Grawp/rtl8812au_rtl8821au;
-    license = stdenv.lib.licenses.gpl2;
+    homepage = https://github.com/zebulon2/rtl8812au-driver-5.2.20;
+    license = licenses.gpl2;
     platforms = [ "x86_64-linux" "i686-linux" ];
+    maintainers = with maintainers; [ danielfullmer ];
   };
 }
diff --git a/pkgs/os-specific/linux/shadow/default.nix b/pkgs/os-specific/linux/shadow/default.nix
index 64d7a694fc14..8875d7ec4b3e 100644
--- a/pkgs/os-specific/linux/shadow/default.nix
+++ b/pkgs/os-specific/linux/shadow/default.nix
@@ -9,7 +9,7 @@ let
   glibc =
     if hostPlatform != buildPlatform
     then glibcCross
-    else assert stdenv ? glibc; stdenv.glibc;
+    else assert hostPlatform.libc == "glibc"; stdenv.cc.libc;
 
   dots_in_usernames = fetchpatch {
     url = http://sources.gentoo.org/cgi-bin/viewvc.cgi/gentoo-x86/sys-apps/shadow/files/shadow-4.1.3-dots-in-usernames.patch;
@@ -60,9 +60,10 @@ stdenv.mkDerivation rec {
     configureFlags="$configureFlags --with-xml-catalog=$PWD/xmlcatalog ";
   '';
 
-  configureFlags = " --enable-man ";
+  configureFlags = " --enable-man "
+    + stdenv.lib.optionalString (hostPlatform.libc != "glibc") " --disable-nscd ";
 
-  preBuild = assert glibc != null;
+  preBuild = stdenv.lib.optionalString (hostPlatform.libc == "glibc")
     ''
       substituteInPlace lib/nscd.c --replace /usr/sbin/nscd ${glibc.bin}/bin/nscd
     '';
diff --git a/pkgs/os-specific/linux/spl/default.nix b/pkgs/os-specific/linux/spl/default.nix
index e0d1754dd749..57698b5ad455 100644
--- a/pkgs/os-specific/linux/spl/default.nix
+++ b/pkgs/os-specific/linux/spl/default.nix
@@ -61,13 +61,19 @@ in
   assert kernel != null;
 {
     splStable = common {
-      version = "0.7.5";
-      sha256 = "0njb3274bc5pfr80pzj94sljq457pr71n50s0gsccbz8ghk28rlr";
+      version = "0.7.6";
+      sha256 = "1l641d89k48ngmarx9mxh8gw2zzrf7fw7n8zmslhz4h1152plddb";
     };
 
     splUnstable = common {
-      version = "2017-12-21";
-      rev = "c9821f1ccc647dfbd506f381b736c664d862d126";
-      sha256 = "08r6sa36jaj6n54ap18npm6w85v5yn3x8ljg792h37f49b8kir6c";
+      version = "2018-01-24";
+      rev = "23602fdb39e1254c669707ec9d2d0e6bcdbf1771";
+      sha256 = "09py2dwj77f6s2qcnkwdslg5nxb3hq2bq39zpxpm6msqyifhl69h";
+    };
+
+    splLegacyCrypto = common {
+      version = "2018-01-24";
+      rev = "23602fdb39e1254c669707ec9d2d0e6bcdbf1771";
+      sha256 = "09py2dwj77f6s2qcnkwdslg5nxb3hq2bq39zpxpm6msqyifhl69h";
     };
 }
diff --git a/pkgs/os-specific/linux/systemd/cryptsetup-generator.nix b/pkgs/os-specific/linux/systemd/cryptsetup-generator.nix
index dc0a23be98fe..f69269347e37 100644
--- a/pkgs/os-specific/linux/systemd/cryptsetup-generator.nix
+++ b/pkgs/os-specific/linux/systemd/cryptsetup-generator.nix
@@ -10,21 +10,15 @@ stdenv.lib.overrideDerivation systemd (p: {
   outputs = [ "out" ];
 
   buildPhase = ''
-    make $makeFlags built-sources
-    make $makeFlags systemd-cryptsetup
-    make $makeFlags systemd-cryptsetup-generator
+    ninja systemd-cryptsetup systemd-cryptsetup-generator
   '';
 
-  # For some reason systemd-cryptsetup-generator is a wrapper-script
-  # with the current release of systemd. We want the real one.
-
-  # TODO: Remove `.libs` prefix when the wrapper-script is gone
   installPhase = ''
     mkdir -p $out/lib/systemd/
-    cp .libs/systemd-cryptsetup $out/lib/systemd/systemd-cryptsetup
-    cp .libs/*.so $out/lib/
+    cp systemd-cryptsetup $out/lib/systemd/systemd-cryptsetup
+    cp src/shared/*.so $out/lib/systemd/
 
     mkdir -p $out/lib/systemd/system-generators/
-    cp .libs/systemd-cryptsetup-generator $out/lib/systemd/system-generators/systemd-cryptsetup-generator
+    cp systemd-cryptsetup-generator $out/lib/systemd/system-generators/systemd-cryptsetup-generator
   '';
 })
diff --git a/pkgs/os-specific/linux/systemd/default.nix b/pkgs/os-specific/linux/systemd/default.nix
index aeda85584e79..9085b1703c0a 100644
--- a/pkgs/os-specific/linux/systemd/default.nix
+++ b/pkgs/os-specific/linux/systemd/default.nix
@@ -1,194 +1,225 @@
 { stdenv, fetchFromGitHub, fetchpatch, pkgconfig, intltool, gperf, libcap, kmod
 , zlib, xz, pam, acl, cryptsetup, libuuid, m4, utillinux, libffi
-, glib, kbd, libxslt, coreutils, libgcrypt, libgpgerror, libapparmor, audit, lz4
-, kexectools, libmicrohttpd, linuxHeaders ? stdenv.cc.libc.linuxHeaders, libseccomp
-, iptables, gnu-efi
+, glib, kbd, libxslt, coreutils, libgcrypt, libgpgerror, libidn2, libapparmor
+, audit, lz4, bzip2, kexectools, libmicrohttpd
+, linuxHeaders ? stdenv.cc.libc.linuxHeaders
+, libseccomp, iptables, gnu-efi
 , autoreconfHook, gettext, docbook_xsl, docbook_xml_dtd_42, docbook_xml_dtd_45
+, ninja, meson, python3Packages, glibcLocales
+, patchelf
+, getent
 }:
 
 assert stdenv.isLinux;
 
-stdenv.mkDerivation rec {
-  version = "234";
-  name = "systemd-${version}";
-
-  src = fetchFromGitHub {
-    owner = "nixos";
-    repo = "systemd";
-    rev = "eef5613fda5";
-    sha256 = "0wgh5y319v56hcs82mhs58ipb100cz4x41vz3kh4bq1n7sx88cdz";
-  };
-
-  outputs = [ "out" "lib" "man" "dev" ];
-
-  nativeBuildInputs =
-    [ pkgconfig intltool gperf libxslt
-      /* FIXME: we may be able to prevent the following dependencies
-         by generating an autoconf'd tarball, but that's probably not
-         worth it. */
-      autoreconfHook gettext docbook_xsl docbook_xml_dtd_42 docbook_xml_dtd_45
-    ];
-  buildInputs =
-    [ linuxHeaders libcap kmod xz pam acl
-      /* cryptsetup */ libuuid m4 glib libgcrypt libgpgerror
-      libmicrohttpd kexectools libseccomp libffi audit lz4 libapparmor
-      iptables gnu-efi
-    ];
-
-  configureFlags =
-    [ "--localstatedir=/var"
-      "--sysconfdir=/etc"
-      "--with-rootprefix=$(out)"
-      "--with-kbd-loadkeys=${kbd}/bin/loadkeys"
-      "--with-kbd-setfont=${kbd}/bin/setfont"
-      "--with-rootprefix=$(out)"
-      "--with-dbuspolicydir=$(out)/etc/dbus-1/system.d"
-      "--with-dbussystemservicedir=$(out)/share/dbus-1/system-services"
-      "--with-dbussessionservicedir=$(out)/share/dbus-1/services"
-      "--with-tty-gid=3" # tty in NixOS has gid 3
-      "--disable-tests"
-
-      "--enable-lz4"
-      "--enable-hostnamed"
-      "--enable-networkd"
-      "--disable-sysusers"
-      "--enable-timedated"
-      "--enable-timesyncd"
-      "--disable-firstboot"
-      "--enable-localed"
-      "--enable-resolved"
-      "--disable-split-usr"
-      "--disable-libcurl"
-      "--disable-libidn"
-      "--disable-quotacheck"
-      "--disable-ldconfig"
-      "--disable-smack"
-
-      (if stdenv.isArm then "--disable-gnuefi" else "--enable-gnuefi")
-      "--with-efi-libdir=${gnu-efi}/lib"
-      "--with-efi-includedir=${gnu-efi}/include"
-      "--with-efi-ldsdir=${gnu-efi}/lib"
-
-      "--with-sysvinit-path="
-      "--with-sysvrcnd-path="
-      "--with-rc-local-script-path-stop=/etc/halt.local"
-    ];
-
-  hardeningDisable = [ "stackprotector" ];
-
-  patches = [
-    # TODO: Remove this patch when we have a systemd version
-    # with https://github.com/systemd/systemd/pull/6678
-    (fetchpatch {
-        url = "https://github.com/systemd/systemd/commit/58a78ae77063eddfcd23ea272bd2e0ddc9ea3ff7.patch";
-        sha256 = "0g3pvqigs69mciw6lj3zg12dmxnhwxndwxdjg78af52xrp0djfg8";
-    })
-  ];
-
-  preConfigure =
-    ''
-      unset RANLIB
-
-      ./autogen.sh
-
-      # FIXME: patch this in systemd properly (and send upstream).
-      for i in src/remount-fs/remount-fs.c src/core/mount.c src/core/swap.c src/fsck/fsck.c units/emergency.service.in units/rescue.service.in src/journal/cat.c src/core/shutdown.c src/nspawn/nspawn.c src/shared/generator.c; do
-        test -e $i
-        substituteInPlace $i \
-          --replace /usr/bin/getent ${stdenv.glibc.bin}/bin/getent \
-          --replace /bin/mount ${utillinux.bin}/bin/mount \
-          --replace /bin/umount ${utillinux.bin}/bin/umount \
-          --replace /sbin/swapon ${utillinux.bin}/sbin/swapon \
-          --replace /sbin/swapoff ${utillinux.bin}/sbin/swapoff \
-          --replace /sbin/fsck ${utillinux.bin}/sbin/fsck \
-          --replace /bin/echo ${coreutils}/bin/echo \
-          --replace /bin/cat ${coreutils}/bin/cat \
-          --replace /sbin/sulogin ${utillinux.bin}/sbin/sulogin \
-          --replace /usr/lib/systemd/systemd-fsck $out/lib/systemd/systemd-fsck \
-          --replace /bin/plymouth /run/current-system/sw/bin/plymouth # To avoid dependency
-      done
-
-      substituteInPlace src/journal/catalog.c \
-        --replace /usr/lib/systemd/catalog/ $out/lib/systemd/catalog/
-
-      configureFlagsArray+=("--with-ntp-servers=0.nixos.pool.ntp.org 1.nixos.pool.ntp.org 2.nixos.pool.ntp.org 3.nixos.pool.ntp.org")
+let
+  pythonLxmlEnv = python3Packages.python.withPackages ( ps: with ps; [ python3Packages.lxml ]);
+
+in
+
+  stdenv.mkDerivation rec {
+    version = "237";
+    name = "systemd-${version}";
+
+    src = fetchFromGitHub {
+      owner = "NixOS";
+      repo = "systemd";
+      rev = "1e8830dfa77a7dc6976509f4a6edb7e012c50792";
+      sha256 = "1cw1k0i68azmzpqzi3r8jm6mbi2wqlql78fhcg0vvnv1ly8bf7vq";
+    };
+
+    outputs = [ "out" "lib" "man" "dev" ];
+
+    nativeBuildInputs =
+      [ pkgconfig intltool gperf libxslt gettext docbook_xsl docbook_xml_dtd_42 docbook_xml_dtd_45
+        ninja meson
+        coreutils # meson calls date, stat etc.
+        pythonLxmlEnv glibcLocales
+        patchelf getent
+      ];
+    buildInputs =
+      [ linuxHeaders libcap kmod xz pam acl
+        /* cryptsetup */ libuuid m4 glib libgcrypt libgpgerror libidn2
+        libmicrohttpd kexectools libseccomp libffi audit lz4 bzip2 libapparmor
+        iptables gnu-efi
+      ];
+
+    #dontAddPrefix = true;
+
+    mesonFlags = [
+      "-Dloadkeys-path=${kbd}/bin/loadkeys"
+      "-Dsetfont-path=${kbd}/bin/setfont"
+      "-Dtty-gid=3" # tty in NixOS has gid 3
+      # "-Dtests=" # TODO
+      "-Dlz4=true"
+      "-Dhostnamed=true"
+      "-Dnetworkd=true"
+      "-Dsysusers=false"
+      "-Dtimedated=true"
+      "-Dtimesyncd=true"
+      "-Dfirstboot=false"
+      "-Dlocaled=true"
+      "-Dresolve=true"
+      "-Dsplit-usr=false"
+      "-Dlibcurl=false"
+      "-Dlibidn=false"
+      "-Dlibidn2=true"
+      "-Dquotacheck=false"
+      "-Dldconfig=false"
+      "-Dsmack=true"
+      "-Dsystem-uid-max=499" #TODO: debug why awking around in /etc/login.defs doesn't work
+      "-Dsystem-gid-max=499"
+  #    "-Dtime-epoch=1"
+
+      (if stdenv.isArm then "-Dgnu-efi=false" else "-Dgnu-efi=true")
+      "-Defi-libdir=${gnu-efi}/lib"
+      "-Defi-includedir=${gnu-efi}/include/efi"
+      "-Defi-ldsdir=${gnu-efi}/lib"
+
+      "-Dsysvinit-path="
+      "-Dsysvrcnd-path="
+      ];
+
+    preConfigure =
+      ''
+        mesonFlagsArray+=(-Dntp-servers="0.nixos.pool.ntp.org 1.nixos.pool.ntp.org 2.nixos.pool.ntp.org 3.nixos.pool.ntp.org")
+        mesonFlagsArray+=(-Ddbuspolicydir=$out/etc/dbus-1/system.d)
+        mesonFlagsArray+=(-Ddbussessionservicedir=$out/share/dbus-1/services)
+        mesonFlagsArray+=(-Ddbussystemservicedir=$out/share/dbus-1/system-services)
+        mesonFlagsArray+=(-Dpamconfdir=$out/etc/pam.d)
+        mesonFlagsArray+=(-Dsysconfdir=$out/etc)
+        mesonFlagsArray+=(-Drootprefix=$out)
+        mesonFlagsArray+=(-Dlibdir=$lib/lib)
+        mesonFlagsArray+=(-Drootlibdir=$lib/lib)
+        mesonFlagsArray+=(-Dmandir=$man/lib)
+        mesonFlagsArray+=(-Dincludedir=$dev/include)
+        mesonFlagsArray+=(-Dpkgconfiglibdir=$dev/lib/pkgconfig)
+        mesonFlagsArray+=(-Dpkgconfigdatadir=$dev/share/pkgconfig)
+
+        # FIXME: Why aren't includedir and libdir picked up from mesonFlags while other options are?
+        substituteInPlace meson.build \
+          --replace "includedir = join_paths(prefixdir, get_option('includedir'))" \
+                    "includedir = '$dev/include'" \
+          --replace "libdir = join_paths(prefixdir, get_option('libdir'))" \
+                    "libdir = '$lib/lib'"
+
+        export LC_ALL="en_US.UTF-8";
+        # FIXME: patch this in systemd properly (and send upstream).
+        # already fixed in f00929ad622c978f8ad83590a15a765b4beecac9: (u)mount
+        for i in src/remount-fs/remount-fs.c src/core/mount.c src/core/swap.c src/fsck/fsck.c units/emergency.service.in units/rescue.service.in src/journal/cat.c src/core/shutdown.c src/nspawn/nspawn.c src/shared/generator.c; do
+          test -e $i
+          substituteInPlace $i \
+            --replace /usr/bin/getent ${getent}/bin/getent \
+            --replace /sbin/swapon ${utillinux.bin}/sbin/swapon \
+            --replace /sbin/swapoff ${utillinux.bin}/sbin/swapoff \
+            --replace /sbin/fsck ${utillinux.bin}/sbin/fsck \
+            --replace /bin/echo ${coreutils}/bin/echo \
+            --replace /bin/cat ${coreutils}/bin/cat \
+            --replace /sbin/sulogin ${utillinux.bin}/sbin/sulogin \
+            --replace /usr/lib/systemd/systemd-fsck $out/lib/systemd/systemd-fsck \
+            --replace /bin/plymouth /run/current-system/sw/bin/plymouth # To avoid dependency
+        done
+
+        for i in tools/xml_helper.py tools/make-directive-index.py tools/make-man-index.py test/sys-script.py; do
+          substituteInPlace $i \
+            --replace "#!/usr/bin/env python" "#!${pythonLxmlEnv}/bin/python"
+        done
+
+        for i in src/basic/generate-gperfs.py src/resolve/generate-dns_type-gperf.py src/test/generate-sym-test.py ; do
+          substituteInPlace $i \
+            --replace "#!/usr/bin/env python" "#!${python3Packages.python}/bin/python"
+        done
+
+        substituteInPlace src/journal/catalog.c \
+          --replace /usr/lib/systemd/catalog/ $out/lib/systemd/catalog/
+      '';
+
+    # These defines are overridden by CFLAGS and would trigger annoying
+    # warning messages
+    postConfigure = ''
+      substituteInPlace config.h \
+        --replace "POLKIT_AGENT_BINARY_PATH" "_POLKIT_AGENT_BINARY_PATH" \
+        --replace "SYSTEMD_BINARY_PATH" "_SYSTEMD_BINARY_PATH" \
+        --replace "SYSTEMD_CGROUP_AGENT_PATH" "_SYSTEMD_CGROUP_AGENT_PATH"
     '';
 
-  PYTHON_BINARY = "${coreutils}/bin/env python"; # don't want a build time dependency on Python
-
-  NIX_CFLAGS_COMPILE =
-    [ # Can't say ${polkit.bin}/bin/pkttyagent here because that would
-      # lead to a cyclic dependency.
-      "-UPOLKIT_AGENT_BINARY_PATH" "-DPOLKIT_AGENT_BINARY_PATH=\"/run/current-system/sw/bin/pkttyagent\""
-      "-fno-stack-protector"
-
-      # Set the release_agent on /sys/fs/cgroup/systemd to the
-      # currently running systemd (/run/current-system/systemd) so
-      # that we don't use an obsolete/garbage-collected release agent.
-      "-USYSTEMD_CGROUP_AGENT_PATH" "-DSYSTEMD_CGROUP_AGENT_PATH=\"/run/current-system/systemd/lib/systemd/systemd-cgroups-agent\""
-
-      "-USYSTEMD_BINARY_PATH" "-DSYSTEMD_BINARY_PATH=\"/run/current-system/systemd/lib/systemd/systemd\""
-    ];
-
-  installFlags =
-    [ "localstatedir=$(TMPDIR)/var"
-      "sysconfdir=$(out)/etc"
-      "sysvinitdir=$(TMPDIR)/etc/init.d"
-      "pamconfdir=$(out)/etc/pam.d"
-    ];
-
-  postInstall =
-    ''
-      # sysinit.target: Don't depend on
-      # systemd-tmpfiles-setup.service. This interferes with NixOps's
-      # send-keys feature (since sshd.service depends indirectly on
-      # sysinit.target).
-      mv $out/lib/systemd/system/sysinit.target.wants/systemd-tmpfiles-setup-dev.service $out/lib/systemd/system/multi-user.target.wants/
-
-      mkdir -p $out/example/systemd
-      mv $out/lib/{modules-load.d,binfmt.d,sysctl.d,tmpfiles.d} $out/example
-      mv $out/lib/systemd/{system,user} $out/example/systemd
-
-      rm -rf $out/etc/systemd/system
-
-      # Install SysV compatibility commands.
-      mkdir -p $out/sbin
-      ln -s $out/lib/systemd/systemd $out/sbin/telinit
-      for i in init halt poweroff runlevel reboot shutdown; do
-        ln -s $out/bin/systemctl $out/sbin/$i
+    hardeningDisable = [ "stackprotector" ];
+
+    NIX_CFLAGS_COMPILE =
+      [ # Can't say ${polkit.bin}/bin/pkttyagent here because that would
+        # lead to a cyclic dependency.
+        "-UPOLKIT_AGENT_BINARY_PATH" "-DPOLKIT_AGENT_BINARY_PATH=\"/run/current-system/sw/bin/pkttyagent\""
+
+        # Set the release_agent on /sys/fs/cgroup/systemd to the
+        # currently running systemd (/run/current-system/systemd) so
+        # that we don't use an obsolete/garbage-collected release agent.
+        "-USYSTEMD_CGROUP_AGENT_PATH" "-DSYSTEMD_CGROUP_AGENT_PATH=\"/run/current-system/systemd/lib/systemd/systemd-cgroups-agent\""
+
+        "-USYSTEMD_BINARY_PATH" "-DSYSTEMD_BINARY_PATH=\"/run/current-system/systemd/lib/systemd/systemd\""
+      ];
+
+    postInstall =
+      ''
+        # sysinit.target: Don't depend on
+        # systemd-tmpfiles-setup.service. This interferes with NixOps's
+        # send-keys feature (since sshd.service depends indirectly on
+        # sysinit.target).
+        mv $out/lib/systemd/system/sysinit.target.wants/systemd-tmpfiles-setup-dev.service $out/lib/systemd/system/multi-user.target.wants/
+
+        mkdir -p $out/example/systemd
+        mv $out/lib/{modules-load.d,binfmt.d,sysctl.d,tmpfiles.d} $out/example
+        mv $out/lib/systemd/{system,user} $out/example/systemd
+
+        rm -rf $out/etc/systemd/system
+
+        # Install SysV compatibility commands.
+        mkdir -p $out/sbin
+        ln -s $out/lib/systemd/systemd $out/sbin/telinit
+        for i in init halt poweroff runlevel reboot shutdown; do
+          ln -s $out/bin/systemctl $out/sbin/$i
+        done
+
+        # Fix reference to /bin/false in the D-Bus services.
+        for i in $out/share/dbus-1/system-services/*.service; do
+          substituteInPlace $i --replace /bin/false ${coreutils}/bin/false
+        done
+
+        rm -rf $out/etc/rpm
+
+        # "kernel-install" shouldn't be used on NixOS.
+        find $out -name "*kernel-install*" -exec rm {} \;
+
+        # Keep only libudev and libsystemd in the lib output.
+        mkdir -p $out/lib
+        mv $lib/lib/security $lib/lib/libnss* $out/lib/
+      ''; # */
+
+    enableParallelBuilding = true;
+
+    # The rpath to the shared systemd library is not added by meson. The
+    # functionality was removed by a nixpkgs patch because it would overwrite
+    # the existing rpath.
+    postFixup = ''
+      sharedLib=libsystemd-shared-${version}.so
+      for prog in `find $out -type f -executable`; do
+        (patchelf --print-needed $prog | grep $sharedLib > /dev/null) && (
+          patchelf --set-rpath `patchelf --print-rpath $prog`:"$out/lib/systemd" $prog
+        ) || true
       done
+    '';
 
-      # Fix reference to /bin/false in the D-Bus services.
-      for i in $out/share/dbus-1/system-services/*.service; do
-        substituteInPlace $i --replace /bin/false ${coreutils}/bin/false
-      done
-
-      rm -rf $out/etc/rpm
-
-      rm $lib/lib/*.la
-
-      # "kernel-install" shouldn't be used on NixOS.
-      find $out -name "*kernel-install*" -exec rm {} \;
-
-      # Keep only libudev and libsystemd in the lib output.
-      mkdir -p $out/lib
-      mv $lib/lib/security $lib/lib/libnss* $out/lib/
-    ''; # */
-
-  enableParallelBuilding = true;
-
-  # The interface version prevents NixOS from switching to an
-  # incompatible systemd at runtime.  (Switching across reboots is
-  # fine, of course.)  It should be increased whenever systemd changes
-  # in a backwards-incompatible way.  If the interface version of two
-  # systemd builds is the same, then we can switch between them at
-  # runtime; otherwise we can't and we need to reboot.
-  passthru.interfaceVersion = 2;
-
-  meta = {
-    homepage = http://www.freedesktop.org/wiki/Software/systemd;
-    description = "A system and service manager for Linux";
-    platforms = stdenv.lib.platforms.linux;
-    maintainers = [ stdenv.lib.maintainers.eelco ];
-  };
+    # The interface version prevents NixOS from switching to an
+    # incompatible systemd at runtime.  (Switching across reboots is
+    # fine, of course.)  It should be increased whenever systemd changes
+    # in a backwards-incompatible way.  If the interface version of two
+    # systemd builds is the same, then we can switch between them at
+    # runtime; otherwise we can't and we need to reboot.
+    passthru.interfaceVersion = 2;
+
+    meta = {
+      homepage = http://www.freedesktop.org/wiki/Software/systemd;
+      description = "A system and service manager for Linux";
+      platforms = stdenv.lib.platforms.linux;
+      maintainers = [ stdenv.lib.maintainers.eelco ];
+    };
 }
diff --git a/pkgs/os-specific/linux/wireguard/default.nix b/pkgs/os-specific/linux/wireguard/default.nix
index db8a510bb592..c5461c06e830 100644
--- a/pkgs/os-specific/linux/wireguard/default.nix
+++ b/pkgs/os-specific/linux/wireguard/default.nix
@@ -6,11 +6,11 @@ assert kernel != null -> stdenv.lib.versionAtLeast kernel.version "3.10";
 let
   name = "wireguard-${version}";
 
-  version = "0.0.20180118";
+  version = "0.0.20180202";
 
   src = fetchurl {
     url    = "https://git.zx2c4.com/WireGuard/snapshot/WireGuard-${version}.tar.xz";
-    sha256 = "18x8ndnr4lvl3in5sian6f9q69pk8h4xbwldmk7bfrpb5m03ngs6";
+    sha256 = "ee3415b482265ad9e8721aa746aaffdf311058a2d1a4d80e7b6d11bbbf71c722";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/os-specific/linux/zfs/default.nix b/pkgs/os-specific/linux/zfs/default.nix
index 5489bc5abbec..868e354c7b55 100644
--- a/pkgs/os-specific/linux/zfs/default.nix
+++ b/pkgs/os-specific/linux/zfs/default.nix
@@ -5,7 +5,7 @@
 , zlib, libuuid, python, attr, openssl
 
 # Kernel dependencies
-, kernel ? null, spl ? null, splUnstable ? null
+, kernel ? null, spl ? null, splUnstable ? null, splLegacyCrypto ? null
 }:
 
 with stdenv.lib;
@@ -19,6 +19,7 @@ let
     , spl
     , rev ? "zfs-${version}"
     , isUnstable ? false
+    , isLegacyCrypto ? false
     , incompatibleKernelVersion ? null } @ args:
     if buildKernel &&
       (incompatibleKernelVersion != null) &&
@@ -43,7 +44,7 @@ let
       buildInputs =
            optionals buildKernel [ spl ]
         ++ optionals buildUser [ zlib libuuid python attr ]
-        ++ optionals (buildUser && isUnstable) [ openssl ];
+        ++ optionals (buildUser && (isUnstable || isLegacyCrypto)) [ openssl ];
 
       # for zdb to get the rpath to libgcc_s, needed for pthread_cancel to work
       NIX_CFLAGS_LINK = "-lgcc_s";
@@ -141,9 +142,9 @@ in {
     incompatibleKernelVersion = null;
 
     # this package should point to the latest release.
-    version = "0.7.5";
+    version = "0.7.6";
 
-    sha256 = "086g4xjx05sy4fwn5709sm46m2yv35wb915xfmqjvpry46245nig";
+    sha256 = "1k3a69zfdk4ia4z2l69lbz0mj26bwdanxd2wynkdpm2kl3zjj18h";
 
     extraPatches = [
       (fetchpatch {
@@ -160,19 +161,41 @@ in {
     incompatibleKernelVersion = null;
 
     # this package should point to a version / git revision compatible with the latest kernel release
-    version = "2018-01-10";
+    version = "2018-02-02";
 
-    rev = "1d53657bf561564162e2ad6449f80fa0140f1dd6";
-    sha256 = "0ibkhfz06cypgl2c869dzdbdx2i3m8ywwdmnzscv0cin5gm31vhx";
+    rev = "fbd42542686af053f0d162ec4630ffd4fff1cc30";
+    sha256 = "0qzkwnnk7kz1hwvcaqlpzi5yspfhhmd2alklc07k056ddzbx52qb";
     isUnstable = true;
 
     extraPatches = [
       (fetchpatch {
-        url = "https://github.com/Mic92/zfs/compare/ded8f06a3cfee...nixos-zfs-2017-09-12.patch";
-        sha256 = "033wf4jn0h0kp0h47ai98rywnkv5jwvf3xwym30phnaf8xxdx8aj";
+        url = "https://github.com/Mic92/zfs/compare/fbd42542686af053f0d162ec4630ffd4fff1cc30...nixos-zfs-2018-02-02.patch";
+        sha256 = "05wqwjm9648x60vkwxbp8l6z1q73r2a5l2ni28i2f4pla8s3ahln";
       })
     ];
 
     spl = splUnstable;
   };
+
+  zfsLegacyCrypto = common {
+    # comment/uncomment if breaking kernel versions are known
+    incompatibleKernelVersion = null;
+
+    # this package should point to a version / git revision compatible with the latest kernel release
+    version = "2018-02-01";
+
+    rev = "4c46b99d24a6e71b3c72462c11cb051d0930ad60";
+    sha256 = "011lcp2x44jgfzqqk2gjmyii1v7rxcprggv20prxa3c552drsx3c";
+    isUnstable = true;
+
+    extraPatches = [
+      (fetchpatch {
+        url = "https://github.com/Mic92/zfs/compare/4c46b99d24a6e71b3c72462c11cb051d0930ad60...nixos-zfs-2018-02-01.patch";
+        sha256 = "1gqmgqi39qhk5kbbvidh8f2xqq25vj58i9x0wjqvcx6a71qj49ch";
+      })
+    ];
+
+    spl = splLegacyCrypto;
+  };
+
 }
diff --git a/pkgs/servers/amqp/rabbitmq-server/default.nix b/pkgs/servers/amqp/rabbitmq-server/default.nix
index 889ec4d3745f..3d4a8902c918 100644
--- a/pkgs/servers/amqp/rabbitmq-server/default.nix
+++ b/pkgs/servers/amqp/rabbitmq-server/default.nix
@@ -1,40 +1,73 @@
-{ stdenv, fetchurl, erlang, python, libxml2, libxslt, xmlto
+{ stdenv, fetchurl, runCommand
+, erlang, python, libxml2, libxslt, xmlto
 , docbook_xml_dtd_45, docbook_xsl, zip, unzip, rsync
 
 , AppKit, Carbon, Cocoa
 }:
 
-stdenv.mkDerivation rec {
-  name = "rabbitmq-server-${version}";
+let
+  # we only need that one glibc binary (28k instead of 2.7M)
+  getconf = runCommand "getconf" {} ''
+    install -D ${stdenv.lib.getBin stdenv.cc.libc}/bin/getconf $out/bin/getconf
+  '';
 
-  version = "3.6.10";
+in stdenv.mkDerivation rec {
+  name = "rabbitmq-server-${version}";
+  version = "3.6.15";
 
   src = fetchurl {
     url = "https://www.rabbitmq.com/releases/rabbitmq-server/v${version}/${name}.tar.xz";
-    sha256 = "0k1rhg1a51201b1hp6vaf4fk48hqz7m9hw55b8xnnyz2ld88jiqg";
+    sha256 = "1zdmil657mhjmd20jv47s5dfpj2liqwvyg0zv2ky3akanfpgj98y";
   };
 
   buildInputs =
     [ erlang python libxml2 libxslt xmlto docbook_xml_dtd_45 docbook_xsl zip unzip rsync ]
     ++ stdenv.lib.optionals stdenv.isDarwin [ AppKit Carbon Cocoa ];
 
-  preBuild =
-    ''
-      # Fix the "/usr/bin/env" in "calculate-relative".
-      patchShebangs .
-    '';
+  outputs = [ "out" "man" "doc" ];
+
+  postPatch = with stdenv.lib; ''
+    # patch the path to getconf
+    substituteInPlace deps/rabbit_common/src/vm_memory_monitor.erl \
+      --replace "getconf PAGESIZE" "${getconf}/bin/getconf PAGESIZE"
+  '';
+
+  preBuild = ''
+    # Fix the "/usr/bin/env" in "calculate-relative".
+    patchShebangs .
+  '';
 
   installFlags = "PREFIX=$(out) RMQ_ERLAPP_DIR=$(out)";
   installTargets = "install install-man";
 
-  postInstall =
-    ''
-      echo 'PATH=${erlang}/bin:''${PATH:+:}$PATH' >> $out/sbin/rabbitmq-env
+  postInstall = ''
+    echo 'PATH=${erlang}/bin:''${PATH:+:}$PATH' >> $out/sbin/rabbitmq-env
+
+    # we know exactly where rabbitmq is gonna be,
+    # so we patch that into the env-script
+    substituteInPlace $out/sbin/rabbitmq-env \
+      --replace 'RABBITMQ_SCRIPTS_DIR=`dirname $SCRIPT_PATH`' \
+                "RABBITMQ_SCRIPTS_DIR=$out/sbin"
+
+    # there’s a few stray files that belong into share
+    mkdir -p $doc/share/doc/rabbitmq-server
+    mv $out/LICENSE* $doc/share/doc/rabbitmq-server
+
+    # and an unecessarily copied INSTALL file
+    rm $out/INSTALL
+
+    # patched into a source file above;
+    # needs to be explicitely passed to not be stripped by fixup
+    mkdir -p $out/nix-support
+    echo "${getconf}" > $out/nix-support/dont-strip-getconf
+
     '';
 
   meta = {
     homepage = http://www.rabbitmq.com/;
     description = "An implementation of the AMQP messaging protocol";
+    license = stdenv.lib.licenses.mpl11;
     platforms = stdenv.lib.platforms.unix;
+    maintainers = with stdenv.lib.maintainers; [ Profpatsch ];
   };
 }
diff --git a/pkgs/servers/bird/default.nix b/pkgs/servers/bird/default.nix
index 0e77aa1d8ee7..ba29bfa433a9 100644
--- a/pkgs/servers/bird/default.nix
+++ b/pkgs/servers/bird/default.nix
@@ -1,29 +1,54 @@
-{ stdenv, fetchurl, flex, bison, readline
-, enableIPv6 ? false }:
+{ lib, stdenv, fetchurl, flex, bison, readline }:
 
-stdenv.mkDerivation rec {
-  name = "bird-1.6.3";
+with lib;
 
-  src = fetchurl {
-    url = "ftp://bird.network.cz/pub/bird/${name}.tar.gz";
-    sha256 = "0z3yrxqb0p7f8b7r2gk4mvrwfzk45zx7yr9aifbvba1vgksiri9r";
-  };
+let
+
+  generic = { version, sha256, enableIPv6 ? false }:
+    stdenv.mkDerivation rec {
+      name = "bird-${version}";
+
+      src = fetchurl {
+        inherit sha256;
+        url = "ftp://bird.network.cz/pub/bird/${name}.tar.gz";
+      };
+
+      nativeBuildInputs = [ flex bison ];
+      buildInputs = [ readline ];
+
+      patches = [
+        (./. + (builtins.toPath "/dont-create-sysconfdir-${builtins.substring 0 1 version}.patch"))
+      ];
 
-  buildInputs = [ flex bison readline ];
+      configureFlags = [
+        "--localstatedir=/var"
+      ] ++ optional enableIPv6 "--enable-ipv6";
 
-  patches = [
-    ./dont-create-sysconfdir.patch
-  ];
+      meta = {
+        description = "BIRD Internet Routing Daemon";
+        homepage = http://bird.network.cz;
+        license = licenses.gpl2Plus;
+        maintainers = with maintainers; [ viric fpletz ];
+        platforms = platforms.linux;
+      };
+    };
 
-  configureFlags = [
-    "--localstatedir /var"
-  ] ++ stdenv.lib.optional enableIPv6 "--enable-ipv6";
+in
+
+{
+  bird = generic {
+    version = "1.6.3";
+    sha256 = "0z3yrxqb0p7f8b7r2gk4mvrwfzk45zx7yr9aifbvba1vgksiri9r";
+  };
+
+  bird6 = generic {
+    version = "1.6.3";
+    sha256 = "0z3yrxqb0p7f8b7r2gk4mvrwfzk45zx7yr9aifbvba1vgksiri9r";
+    enableIPv6 = true;
+  };
 
-  meta = {
-    description = "BIRD Internet Routing Daemon";
-    homepage = http://bird.network.cz;
-    license = stdenv.lib.licenses.gpl2Plus;
-    maintainers = with stdenv.lib.maintainers; [ viric fpletz ];
-    platforms  = stdenv.lib.platforms.linux;
+  bird2 = generic {
+    version = "2.0.1";
+    sha256 = "0qyh2cxj7hfz90x3fnczjdm3i9g7vr0nc4l4wjkj9qm0646vc52n";
   };
 }
diff --git a/pkgs/servers/bird/dont-create-sysconfdir.patch b/pkgs/servers/bird/dont-create-sysconfdir-1.patch
index 0a11c8a2a8d8..0a11c8a2a8d8 100644
--- a/pkgs/servers/bird/dont-create-sysconfdir.patch
+++ b/pkgs/servers/bird/dont-create-sysconfdir-1.patch
diff --git a/pkgs/servers/bird/dont-create-sysconfdir-2.patch b/pkgs/servers/bird/dont-create-sysconfdir-2.patch
new file mode 100644
index 000000000000..fd86da8a1298
--- /dev/null
+++ b/pkgs/servers/bird/dont-create-sysconfdir-2.patch
@@ -0,0 +1,13 @@
+diff --git a/Makefile.in b/Makefile.in
+index fdd5e6c..45f81a1 100644
+--- a/Makefile.in
++++ b/Makefile.in
+@@ -165,7 +165,7 @@ tags:
+ # Install
+ 
+ install: all
+-	$(INSTALL) -d $(DESTDIR)/$(sbindir) $(DESTDIR)/$(sysconfdir) $(DESTDIR)/@runtimedir@
++	$(INSTALL) -d $(DESTDIR)/$(sbindir) $(DESTDIR)/$(sysconfdir)
+ 	$(INSTALL_PROGRAM) $(exedir)/bird $(DESTDIR)/$(sbindir)/bird
+ 	$(INSTALL_PROGRAM) $(exedir)/birdcl $(DESTDIR)/$(sbindir)/birdcl
+ 	if test -n "@CLIENT@" ; then								\
diff --git a/pkgs/servers/computing/slurm-spank-x11/default.nix b/pkgs/servers/computing/slurm-spank-x11/default.nix
new file mode 100644
index 000000000000..13fad7059afe
--- /dev/null
+++ b/pkgs/servers/computing/slurm-spank-x11/default.nix
@@ -0,0 +1,39 @@
+{ stdenv, fetchFromGitHub, slurm } :
+let
+  version = "0.2.5";
+in
+stdenv.mkDerivation {
+  name = "slurm-spank-x11-${version}";
+  version = version;
+
+  src = fetchFromGitHub {
+    owner = "hautreux";
+    repo = "slurm-spank-x11";
+    rev = version;
+    sha256 = "1dmsr7whxcxwnlvl1x4s3bqr5cr6q5ssb28vqi67w5hj4sshisry";
+  };
+
+  buildPhase = ''
+      gcc -DX11_LIBEXEC_PROG="\"$out/bin/slurm-spank-x11\"" \
+          -g -o slurm-spank-x11 slurm-spank-x11.c
+      gcc -I${slurm.dev}/include -DX11_LIBEXEC_PROG="\"$out/bin/slurm-spank-x11\"" -shared -fPIC \
+          -g -o x11.so slurm-spank-x11-plug.c
+    '';
+
+  installPhase = ''
+      mkdir -p $out/bin $out/lib
+      install -m 755 slurm-spank-x11 $out/bin
+      install -m 755 x11.so $out/lib
+    '';
+
+  meta = with stdenv.lib; {
+    homepage = https://github.com/hautreux/slurm-spank-x11;
+    description = "Plugin for SLURM to allow for interactive X11 sessions";
+    platforms = platforms.linux;
+    license = licenses.gpl3;
+    maintainers = with maintainers; [ markuskowa ];
+  };
+}
+
+
+
diff --git a/pkgs/servers/dns/knot-dns/default.nix b/pkgs/servers/dns/knot-dns/default.nix
index 478fcb9aad7b..a47d3106443f 100644
--- a/pkgs/servers/dns/knot-dns/default.nix
+++ b/pkgs/servers/dns/knot-dns/default.nix
@@ -7,11 +7,11 @@ let inherit (stdenv.lib) optional optionals; in
 # Note: ATM only the libraries have been tested in nixpkgs.
 stdenv.mkDerivation rec {
   name = "knot-dns-${version}";
-  version = "2.6.4";
+  version = "2.6.5";
 
   src = fetchurl {
     url = "http://secure.nic.cz/files/knot-dns/knot-${version}.tar.xz";
-    sha256 = "1d0d37b5047ecd554d927519d5565c29c1ba9b501c100eb5f3a5af184d75386a";
+    sha256 = "33cd676706e2baeb37cf3879ccbc91a1e1cd1ee5d7a082adff4d1e753ce49d46";
   };
 
   outputs = [ "bin" "out" "dev" ];
diff --git a/pkgs/servers/dns/knot-resolver/default.nix b/pkgs/servers/dns/knot-resolver/default.nix
index 2ec12b81f84b..56b4a1552fe6 100644
--- a/pkgs/servers/dns/knot-resolver/default.nix
+++ b/pkgs/servers/dns/knot-resolver/default.nix
@@ -12,11 +12,11 @@ inherit (stdenv.lib) optional optionals optionalString concatStringsSep;
 
 unwrapped = stdenv.mkDerivation rec {
   name = "knot-resolver-${version}";
-  version = "2.0.0";
+  version = "2.1.0";
 
   src = fetchurl {
     url = "http://secure.nic.cz/files/knot-resolver/${name}.tar.xz";
-    sha256 = "b40d9dbef05031464dfff57712f476e7cddc0fda26b41daf660c5a33ea203ce0";
+    sha256 = "0e90ac37965839705bc2154cb07587cb31dd5816e37a14f3552d65676638fc6a";
   };
 
   outputs = [ "out" "dev" ];
diff --git a/pkgs/servers/dns/powerdns/default.nix b/pkgs/servers/dns/powerdns/default.nix
index 79fff80b0b8c..cde2fe1a426c 100644
--- a/pkgs/servers/dns/powerdns/default.nix
+++ b/pkgs/servers/dns/powerdns/default.nix
@@ -1,27 +1,36 @@
-{ stdenv, fetchurl, pkgconfig,
-  boost, libyamlcpp, libsodium, sqlite, protobuf,
-  mysql57, postgresql, lua, openldap, geoip, curl
+{ stdenv, fetchurl, pkgconfig
+, boost, libyamlcpp, libsodium, sqlite, protobuf, botan2
+, mysql57, postgresql, lua, openldap, geoip, curl, opendbx, unixODBC
 }:
 
 stdenv.mkDerivation rec {
   name = "powerdns-${version}";
-  version = "4.0.5";
+  version = "4.1.1";
 
   src = fetchurl {
     url = "http://downloads.powerdns.com/releases/pdns-${version}.tar.bz2";
-    sha256 = "097ci4s2c63gl0bil8yh87dsy0sk3fds4w8cpyjh5kns6zazmj2v";
+    sha256 = "1fh4zgj0gxgcnnhnih8k6fbw18hb9brkkrfpx3mj8b4a3hr8ilq8";
   };
 
   nativeBuildInputs = [ pkgconfig ];
-  buildInputs = [ boost mysql57.connector-c postgresql lua openldap sqlite protobuf geoip libyamlcpp libsodium curl ];
+  buildInputs = [
+    boost mysql57.connector-c postgresql lua openldap sqlite protobuf geoip
+    libyamlcpp libsodium curl opendbx unixODBC botan2
+  ];
+
+  patches = [
+    # checksum type not found, maybe a dependency is to old?
+    ./skip-sha384-test.patch
+  ];
 
   # nix destroy with-modules arguments, when using configureFlags
   preConfigure = ''
     configureFlagsArray=(
-      "--with-modules=bind gmysql geoip gpgsql gsqlite3 ldap lua pipe random remote"
+      "--with-modules=bind gmysql geoip godbc gpgsql gsqlite3 ldap lua mydns opendbx pipe random remote"
       --with-sqlite3
       --with-socketdir=/var/lib/powerdns
       --enable-libsodium
+      --enable-botan
       --enable-tools
       --disable-dependency-tracking
       --disable-silent-rules
@@ -29,7 +38,8 @@ stdenv.mkDerivation rec {
       --enable-unit-tests
     )
   '';
-  checkPhase = "make check";
+
+  doCheck = true;
 
   meta = with stdenv.lib; {
     description = "Authoritative DNS server";
diff --git a/pkgs/servers/dns/powerdns/skip-sha384-test.patch b/pkgs/servers/dns/powerdns/skip-sha384-test.patch
new file mode 100644
index 000000000000..3fafb38c48fb
--- /dev/null
+++ b/pkgs/servers/dns/powerdns/skip-sha384-test.patch
@@ -0,0 +1,14 @@
+--- pdns-4.1.1.org/pdns/test-signers.cc	2018-02-17 11:43:15.953228279 +0000
++++ pdns-4.1.1/pdns/test-signers.cc	2018-02-17 11:44:21.089516393 +0000
+@@ -212,11 +212,6 @@
+       BOOST_CHECK_EQUAL(ds2.getZoneRepresentation(), signer.dsSHA256);
+     }
+ 
+-    auto ds4 = makeDSFromDNSKey(name, drc, DNSSECKeeper::SHA384);
+-    if (!signer.dsSHA384.empty()) {
+-      BOOST_CHECK_EQUAL(ds4.getZoneRepresentation(), signer.dsSHA384);
+-    }
+-
+     auto signature = dcke->sign(message);
+     BOOST_CHECK(dcke->verify(message, signature));
+ 
diff --git a/pkgs/servers/gotty/default.nix b/pkgs/servers/gotty/default.nix
index e63e13a218e7..89f1821981fc 100644
--- a/pkgs/servers/gotty/default.nix
+++ b/pkgs/servers/gotty/default.nix
@@ -19,7 +19,7 @@ buildGoPackage rec {
   meta = with stdenv.lib; {
     description = "Share your terminal as a web application";
     homepage = https://github.com/yudai/gotty;
-    maintainers = with maintainers; [ matthiasbeyer ];
+    maintainers = with maintainers; [ ];
     license = licenses.mit;
   };
 }
diff --git a/pkgs/servers/home-assistant/component-packages.nix b/pkgs/servers/home-assistant/component-packages.nix
index 679ca2afd43a..43b2418db771 100644
--- a/pkgs/servers/home-assistant/component-packages.nix
+++ b/pkgs/servers/home-assistant/component-packages.nix
@@ -2,7 +2,7 @@
 # Do not edit!
 
 {
-  version = "0.62.1";
+  version = "0.63.3";
   components = {
     "nuimo_controller" = ps: with ps; [  ];
     "bbb_gpio" = ps: with ps; [  ];
@@ -23,7 +23,7 @@
     "sensor.dnsip" = ps: with ps; [ aiodns ];
     "emulated_hue" = ps: with ps; [ aiohttp-cors ];
     "http" = ps: with ps; [ aiohttp-cors ];
-    "sensor.imap" = ps: with ps; [  ];
+    "sensor.imap" = ps: with ps; [ aioimaplib ];
     "light.lifx" = ps: with ps; [  ];
     "scene.hunterdouglas_powerview" = ps: with ps; [  ];
     "alarmdecoder" = ps: with ps; [  ];
@@ -160,10 +160,11 @@
     "media_player.liveboxplaytv" = ps: with ps; [  ];
     "lametric" = ps: with ps; [  ];
     "notify.lametric" = ps: with ps; [  ];
-    "sensor.luftdaten" = ps: with ps; [  ];
+    "sensor.luftdaten" = ps: with ps; [ luftdaten ];
     "sensor.lyft" = ps: with ps; [  ];
     "notify.matrix" = ps: with ps; [ matrix-client ];
     "maxcube" = ps: with ps; [  ];
+    "mercedesme" = ps: with ps; [  ];
     "notify.message_bird" = ps: with ps; [  ];
     "sensor.mfi" = ps: with ps; [  ];
     "switch.mfi" = ps: with ps; [  ];
@@ -216,6 +217,7 @@
     "light.rpi_gpio_pwm" = ps: with ps; [  ];
     "canary" = ps: with ps; [  ];
     "sensor.cpuspeed" = ps: with ps; [  ];
+    "melissa" = ps: with ps; [  ];
     "camera.synology" = ps: with ps; [  ];
     "hdmi_cec" = ps: with ps; [  ];
     "light.tplink" = ps: with ps; [  ];
@@ -271,6 +273,7 @@
     "lutron_caseta" = ps: with ps; [  ];
     "lutron" = ps: with ps; [  ];
     "notify.mailgun" = ps: with ps; [  ];
+    "media_player.mediaroom" = ps: with ps; [  ];
     "mochad" = ps: with ps; [  ];
     "modbus" = ps: with ps; [  ];
     "media_player.monoprice" = ps: with ps; [  ];
@@ -288,12 +291,14 @@
     "sensor.otp" = ps: with ps; [  ];
     "sensor.openweathermap" = ps: with ps; [  ];
     "weather.openweathermap" = ps: with ps; [  ];
+    "sensor.pollen" = ps: with ps; [  ];
     "qwikswitch" = ps: with ps; [  ];
     "rainbird" = ps: with ps; [  ];
     "climate.sensibo" = ps: with ps; [  ];
     "sensor.serial" = ps: with ps; [  ];
     "switch.acer_projector" = ps: with ps; [ pyserial ];
     "lock.sesame" = ps: with ps; [  ];
+    "goalfeed" = ps: with ps; [  ];
     "sensor.sma" = ps: with ps; [  ];
     "device_tracker.snmp" = ps: with ps; [ pysnmp ];
     "sensor.snmp" = ps: with ps; [ pysnmp ];
@@ -316,9 +321,10 @@
     "lirc" = ps: with ps; [  ];
     "fan.xiaomi_miio" = ps: with ps; [  ];
     "light.xiaomi_miio" = ps: with ps; [  ];
+    "remote.xiaomi_miio" = ps: with ps; [  ];
     "switch.xiaomi_miio" = ps: with ps; [  ];
     "vacuum.xiaomi_miio" = ps: with ps; [  ];
-    "media_player.mpd" = ps: with ps; [  ];
+    "media_player.mpd" = ps: with ps; [ mpd2 ];
     "light.mystrom" = ps: with ps; [  ];
     "switch.mystrom" = ps: with ps; [  ];
     "nest" = ps: with ps; [  ];
@@ -329,7 +335,7 @@
     "sensor.sochain" = ps: with ps; [  ];
     "sensor.synologydsm" = ps: with ps; [  ];
     "tado" = ps: with ps; [  ];
-    "telegram_bot" = ps: with ps; [  ];
+    "telegram_bot" = ps: with ps; [ python-telegram-bot ];
     "sensor.twitch" = ps: with ps; [  ];
     "velbus" = ps: with ps; [  ];
     "media_player.vlc" = ps: with ps; [  ];
@@ -380,6 +386,7 @@
     "media_player.snapcast" = ps: with ps; [  ];
     "sensor.speedtest" = ps: with ps; [  ];
     "recorder" = ps: with ps; [ sqlalchemy ];
+    "sensor.sql" = ps: with ps; [ sqlalchemy ];
     "statsd" = ps: with ps; [ statsd ];
     "sensor.steam_online" = ps: with ps; [  ];
     "tahoma" = ps: with ps; [  ];
diff --git a/pkgs/servers/home-assistant/default.nix b/pkgs/servers/home-assistant/default.nix
index bce0369cb529..cb9424ad5cfc 100644
--- a/pkgs/servers/home-assistant/default.nix
+++ b/pkgs/servers/home-assistant/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub, python3
+{ lib, fetchFromGitHub, python3
 , extraComponents ? []
 , extraPackages ? ps: []
 , skipPip ? true }:
@@ -8,17 +8,31 @@ let
   py = python3.override {
     packageOverrides = self: super: {
       yarl = super.yarl.overridePythonAttrs (oldAttrs: rec {
-        version = "0.18.0";
+        version = "1.1.0";
         src = oldAttrs.src.override {
           inherit version;
-          sha256 = "11j8symkxh0ngvpddqpj85qmk6p70p20jca3alxc181gk3vx785s";
+          sha256 = "162630v7f98l27h11msk9416lqwm2mpgxh4s636594nlbfs9by3a";
         };
       });
       aiohttp = super.aiohttp.overridePythonAttrs (oldAttrs: rec {
-        version = "2.3.7";
+        version = "2.3.10";
         src = oldAttrs.src.override {
           inherit version;
-          sha256 = "0fzfpx5ny7559xrxaawnylq20dvrkjiag0ypcd13frwwivrlsagy";
+          sha256 = "8adda6583ba438a4c70693374e10b60168663ffa6564c5c75d3c7a9055290964";
+        };
+      });
+      pytest = super.pytest.overridePythonAttrs (oldAttrs: rec {
+        version = "3.3.1";
+        src = oldAttrs.src.override {
+          inherit version;
+          sha256 = "14zbnbn53yvrpv79ch6n02myq9b4winjkaykzi356sfqb7f3d16g";
+        };
+      });
+      voluptuous = super.voluptuous.overridePythonAttrs (oldAttrs: rec {
+        version = "0.10.5";
+        src = oldAttrs.src.override {
+          inherit version;
+          sha256 = "15i3gaap8ilhpbah1ffc6q415wkvliqxilc6s69a4rinvkw6cx3s";
         };
       });
       hass-frontend = super.callPackage ./frontend.nix { };
@@ -37,7 +51,7 @@ let
   extraBuildInputs = extraPackages py.pkgs;
 
   # Don't forget to run parse-requirements.py after updating
-  hassVersion = "0.62.1";
+  hassVersion = "0.63.3";
 
 in with py.pkgs; buildPythonApplication rec {
   pname = "homeassistant";
@@ -50,14 +64,14 @@ in with py.pkgs; buildPythonApplication rec {
     owner = "home-assistant";
     repo = "home-assistant";
     rev = version;
-    sha256 = "0151prwk2ci6bih0mdmc3r328nrvazn9jwk0w26wmd4cpvnb5h26";
+    sha256 = "1lrdrn0x8i81vbqxziv5fgcc8ldz7x5r62kfz3nyg4g43rk3dqq8";
   };
 
   propagatedBuildInputs = [
     # From setup.py
-    requests pyyaml pytz pip jinja2 voluptuous typing aiohttp yarl async-timeout chardet astral certifi
-    # From the components that are part of the default configuration.yaml
-    sqlalchemy aiohttp-cors hass-frontend user-agents distro mutagen xmltodict netdisco
+    requests pyyaml pytz pip jinja2 voluptuous typing aiohttp yarl async-timeout chardet astral certifi attrs
+    # From http, frontend and recorder components
+    sqlalchemy aiohttp-cors hass-frontend user-agents
   ] ++ componentBuildInputs ++ extraBuildInputs;
 
   checkInputs = [
@@ -73,9 +87,9 @@ in with py.pkgs; buildPythonApplication rec {
       tests/components/test_{api,configurator,demo,discovery,frontend,init,introduction,logger,script,shell_command,system_log,websocket_api}.py
   '';
 
-  makeWrapperArgs = [] ++ stdenv.lib.optional skipPip [ "--add-flags --skip-pip" ];
+  makeWrapperArgs = lib.optional skipPip "--add-flags --skip-pip";
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
     homepage = https://home-assistant.io/;
     description = "Open-source home automation platform running on Python 3";
     license = licenses.asl20;
diff --git a/pkgs/servers/home-assistant/frontend.nix b/pkgs/servers/home-assistant/frontend.nix
index 6e1a789012f3..018405f578db 100644
--- a/pkgs/servers/home-assistant/frontend.nix
+++ b/pkgs/servers/home-assistant/frontend.nix
@@ -2,10 +2,10 @@
 
 buildPythonPackage rec {
   pname = "home-assistant-frontend";
-  version = "20180130.0";
+  version = "20180209.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0b9klisl7hh30rml8qlrp9gpz33z9b825pd1vxbck48k0s98z1zi";
+    sha256 = "b85f0e833871408a95619ae38d5344701a6466e8f7b5530e718ccc260b68d3ed";
   };
 }
diff --git a/pkgs/servers/home-assistant/parse-requirements.py b/pkgs/servers/home-assistant/parse-requirements.py
index aa293921e871..5af794e75fa4 100755
--- a/pkgs/servers/home-assistant/parse-requirements.py
+++ b/pkgs/servers/home-assistant/parse-requirements.py
@@ -52,10 +52,16 @@ packages = json.loads(output)
 
 def name_to_attr_path(req):
     attr_paths = []
-    pattern = re.compile('python3\\.6-{}-\\d'.format(req), re.I)
-    for attr_path, package in packages.items():
-        if pattern.match(package['name']):
-            attr_paths.append(attr_path)
+    names = [req]
+    # E.g. python-mpd2 is actually called python3.6-mpd2
+    # instead of python-3.6-python-mpd2 inside Nixpkgs
+    if req.startswith('python-'):
+        names.append(req[len('python-'):])
+    for name in names:
+        pattern = re.compile('^python\\d\\.\\d-{}-\\d'.format(name), re.I)
+        for attr_path, package in packages.items():
+            if pattern.match(package['name']):
+                attr_paths.append(attr_path)
     # Let's hope there's only one derivation with a matching name
     assert(len(attr_paths) <= 1)
     if attr_paths:
@@ -64,6 +70,7 @@ def name_to_attr_path(req):
         return None
 
 version = get_version()
+print('Generating component-packages.nix for version {}'.format(version))
 requirements = fetch_reqs(version=version)
 build_inputs = {}
 for component, reqs in requirements.items():
diff --git a/pkgs/servers/http/h2o/default.nix b/pkgs/servers/http/h2o/default.nix
new file mode 100644
index 000000000000..cd2985960a75
--- /dev/null
+++ b/pkgs/servers/http/h2o/default.nix
@@ -0,0 +1,30 @@
+{ stdenv, fetchFromGitHub
+, pkgconfig, cmake
+, libressl_2_6, libuv, zlib
+}:
+
+with builtins;
+
+stdenv.mkDerivation rec {
+  name = "h2o-${version}";
+  version = "2.2.4";
+
+  src = fetchFromGitHub {
+    owner  = "h2o";
+    repo   = "h2o";
+    rev    = "refs/tags/v${version}";
+    sha256 = "0176x0bzjry19zs074a9i5vhncc842xikmx43wj61jky318nq4w4";
+  };
+
+  nativeBuildInputs = [ pkgconfig cmake ];
+  buildInputs = [ libressl_2_6 libuv zlib ];
+  enableParallelBuilding = true;
+
+  meta = {
+    description = "Optimized HTTP/1 and HTTP/2 server";
+    homepage    = https://h2o.examp1e.net;
+    license     = stdenv.lib.licenses.mit;
+    maintainers = [ stdenv.lib.maintainers.thoughtpolice ];
+    platforms   = stdenv.lib.platforms.linux;
+  };
+}
diff --git a/pkgs/servers/http/lwan/default.nix b/pkgs/servers/http/lwan/default.nix
new file mode 100644
index 000000000000..878211ebf024
--- /dev/null
+++ b/pkgs/servers/http/lwan/default.nix
@@ -0,0 +1,35 @@
+{ stdenv, fetchFromGitHub, pkgconfig, zlib, cmake, jemalloc }:
+
+stdenv.mkDerivation rec {
+  pname = "lwan";
+  version = "0.1";
+  name = "${pname}-${version}";
+
+  src = fetchFromGitHub {
+    owner = "lpereira";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "1mckryzb06smky0bx2bkqwqzpnq4pb8vlgmmwsvqmwi4mmw9wmi1";
+  };
+
+  nativeBuildInputs = [ cmake pkgconfig ];
+
+  buildInputs = [ jemalloc zlib ];
+
+  meta = with stdenv.lib; {
+    description = "Lightweight high-performance multi-threaded web server";
+    longDescription = "A lightweight and speedy web server with a low memory
+      footprint (~500KiB for 10k idle connections), with minimal system calls and
+      memory allocation.  Lwan contains a hand-crafted HTTP request parser. Files are
+      served using the most efficient way according to their size: no copies between
+      kernel and userland for files larger than 16KiB.  Smaller files are sent using
+      vectored I/O of memory-mapped buffers. Header overhead is considered before
+      compressing small files.  Features include: mustache templating engine and IPv6
+      support.
+    ";
+    homepage = "https://lwan.ws/";
+    license = licenses.gpl2;
+    platforms = platforms.linux;
+    maintainers = with maintainers; [ leenaars ];
+  };
+}
diff --git a/pkgs/servers/http/nginx/modules.nix b/pkgs/servers/http/nginx/modules.nix
index 36d0ea6b1e88..780f20017982 100644
--- a/pkgs/servers/http/nginx/modules.nix
+++ b/pkgs/servers/http/nginx/modules.nix
@@ -152,8 +152,8 @@
       moduleSrc = fetchFromGitHub {
         owner  = "pagespeed";
         repo   = "ngx_pagespeed";
-        rev    = "v${version}-beta";
-        sha256 = "176skx7zmi7islc1hmdxcynix4lkvgmr78lknn13s9gskc7qi25w";
+        rev    = "v${version}-stable";
+        sha256 = "0ry7vmkb2bx0sspl1kgjlrzzz6lbz07313ks2lr80rrdm2zb16wp";
       };
 
       ngx_pagespeed = pkgs.runCommand
diff --git a/pkgs/servers/mail/exim/default.nix b/pkgs/servers/mail/exim/default.nix
index 45ac738c5bb9..b386fadabd46 100644
--- a/pkgs/servers/mail/exim/default.nix
+++ b/pkgs/servers/mail/exim/default.nix
@@ -1,15 +1,18 @@
-{ coreutils, fetchurl, db, openssl, pcre, perl, pkgconfig, stdenv }:
+{ coreutils, db, fetchurl, openldap, openssl, pcre, perl, pkgconfig, stdenv
+, enableLDAP ? false
+}:
 
 stdenv.mkDerivation rec {
-  name = "exim-4.90";
+  name = "exim-4.90.1";
 
   src = fetchurl {
     url = "http://ftp.exim.org/pub/exim/exim4/${name}.tar.xz";
-    sha256 = "101syariyvv2xxhjyx1zfdvad6303ihp67800s8n4083km98nm4k";
+    sha256 = "09ppq8l7cah6dcqwdvpa6r12i6fdcd9lvxlfp18mggj3438xz62w";
   };
 
   nativeBuildInputs = [ pkgconfig ];
-  buildInputs = [ coreutils db openssl pcre perl ];
+  buildInputs = [ coreutils db openssl pcre perl ]
+    ++ stdenv.lib.optional enableLDAP openldap;
 
   preBuild = ''
     sed '
@@ -33,6 +36,11 @@ stdenv.mkDerivation rec {
       s:^# \(RM_COMMAND\)=.*:\1=${coreutils}/bin/rm:
       s:^# \(TOUCH_COMMAND\)=.*:\1=${coreutils}/bin/touch:
       s:^# \(PERL_COMMAND\)=.*:\1=${perl}/bin/perl:
+      ${stdenv.lib.optionalString enableLDAP ''
+        s:^# \(LDAP_LIB_TYPE=OPENLDAP2\)$:\1:
+        s:^# \(LOOKUP_LDAP=yes\)$:\1:
+        s:^# \(LOOKUP_LIBS\)=.*:\1=-lldap:
+      ''}
       #/^\s*#.*/d
       #/^\s*$/d
     ' < src/EDITME > Local/Makefile
diff --git a/pkgs/servers/matrix-synapse/default.nix b/pkgs/servers/matrix-synapse/default.nix
index e499dc5de04b..d8352df3623d 100644
--- a/pkgs/servers/matrix-synapse/default.nix
+++ b/pkgs/servers/matrix-synapse/default.nix
@@ -1,4 +1,4 @@
-{ lib, pkgs, stdenv, pythonPackages, fetchurl, fetchFromGitHub }:
+{ lib, pkgs, stdenv, pythonPackages, fetchurl, fetchFromGitHub, fetchpatch }:
 let
   matrix-angular-sdk = pythonPackages.buildPythonPackage rec {
     name = "matrix-angular-sdk-${version}";
@@ -35,14 +35,20 @@ in pythonPackages.buildPythonApplication rec {
     sha256 = "1ggdnb4c8y835j9lxsglxry6fqy7d190s70rccjrc3rj0p5vwlyj";
   };
 
-  patches = [ ./matrix-synapse.patch ];
+  patches = [
+    (fetchpatch { # Update pynacl dependency
+      url = "https://github.com/matrix-org/synapse/pull/2888.patch";
+      sha256 = "0gr9vwv02ps17d6pzassp9xmj1qbdgxwn1z4kckx4x964zzhyn4f";
+    })
+    ./matrix-synapse.patch
+  ];
 
   propagatedBuildInputs = with pythonPackages; [
     blist canonicaljson daemonize dateutil frozendict pillow pyasn1
     pydenticon pymacaroons-pynacl pynacl pyopenssl pysaml2 pytz requests
     signedjson systemd twisted ujson unpaddedbase64 pyyaml
     matrix-angular-sdk bleach netaddr jinja2 psycopg2
-    psutil msgpack lxml matrix-synapse-ldap3
+    psutil msgpack-python lxml matrix-synapse-ldap3
     phonenumbers jsonschema affinity bcrypt
   ];
 
diff --git a/pkgs/servers/matterbridge/default.nix b/pkgs/servers/matterbridge/default.nix
index eb8275b94028..14662ff6cc25 100644
--- a/pkgs/servers/matterbridge/default.nix
+++ b/pkgs/servers/matterbridge/default.nix
@@ -2,13 +2,13 @@
 
 buildGoPackage rec {
   name = "matterbridge-${version}";
-  version = "1.6.3";
+  version = "1.7.1";
 
   goPackagePath = "github.com/42wim/matterbridge";
 
   src = fetchurl {
     url = "https://github.com/42wim/matterbridge/archive/v${version}.tar.gz";
-    sha256 = "1d2wrfq07kk5l19w2d6yyjcdvn9b39cji1k5vzsfq0xkdb6b8spb";
+    sha256 = "0ajc7xswmwhc2xn937sv3b76s8hblfn9x9rj5825hi3d3s8zqq88";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/servers/mattermost/default.nix b/pkgs/servers/mattermost/default.nix
index bf2824688441..4890ed5babf6 100644
--- a/pkgs/servers/mattermost/default.nix
+++ b/pkgs/servers/mattermost/default.nix
@@ -2,18 +2,18 @@
 
 buildGoPackage rec {
   name = "mattermost-${version}";
-  version = "4.4.1";
+  version = "4.7.0";
 
   src = fetchFromGitHub {
     owner = "mattermost";
     repo = "mattermost-server";
     rev = "v${version}";
-    sha256 = "0imda96wgr2nkkxs2jfcqszx1fqgmbbrh7zqmgjh6ks3an1v4m3c";
+    sha256 = "11rw2m26mf4x6xbxkf37c1j16kyxx059jv3cdajkpv31xn82s7iv";
   };
 
   webApp = fetchurl {
     url = "https://releases.mattermost.com/${version}/mattermost-team-${version}-linux-amd64.tar.gz";
-    sha256 = "1gnzv9xkqawi36z7v9xsy1gk16x71qf0kn8r059qvyarjlyp7888";
+    sha256 = "09dzkvrwj4ynk8yqrcbnhmv9hm3z3r3vyjrbzpvmznfrwcccc7lr";
   };
 
   goPackagePath = "github.com/mattermost/mattermost-server";
diff --git a/pkgs/servers/minio/default.nix b/pkgs/servers/minio/default.nix
index b553a2022864..ea77b32a8666 100644
--- a/pkgs/servers/minio/default.nix
+++ b/pkgs/servers/minio/default.nix
@@ -3,13 +3,13 @@
 buildGoPackage rec {
   name = "minio-${version}";
 
-  version = "2018-01-18T20-33-21Z";
+  version = "2018-02-09T22-40-05Z";
 
   src = fetchFromGitHub {
     owner = "minio";
     repo = "minio";
     rev = "RELEASE.${version}";
-    sha256 = "102rilh1kjf9y6g6y83ikk42w7g1sbld11md3wm54hynyh956xrs";
+    sha256 = "0qxrzmkm5hza5xbx9dkrgadwjg3hykwf79hix3s0laqyksmpj9mk";
   };
 
   goPackagePath = "github.com/minio/minio";
@@ -22,7 +22,7 @@ buildGoPackage rec {
     homepage = https://www.minio.io/;
     description = "An S3-compatible object storage server";
     maintainers = with maintainers; [ eelco bachp ];
-    platforms = platforms.x86_64 ++ ["aarch64-linux"];
+    platforms = platforms.unix;
     license = licenses.asl20;
   };
 }
diff --git a/pkgs/servers/monitoring/net-snmp/default.nix b/pkgs/servers/monitoring/net-snmp/default.nix
index 1d0b5fb83362..77dcfa43c43f 100644
--- a/pkgs/servers/monitoring/net-snmp/default.nix
+++ b/pkgs/servers/monitoring/net-snmp/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, autoreconfHook, file, openssl, perl, unzip }:
+{ stdenv, fetchurl, fetchpatch, autoreconfHook, file, openssl, perl, unzip }:
 
 stdenv.mkDerivation rec {
   name = "net-snmp-5.7.3";
@@ -8,6 +8,19 @@ stdenv.mkDerivation rec {
     sha256 = "0gkss3zclm23zwpqfhddca8278id7pk6qx1mydpimdrrcndwgpz8";
   };
 
+  patches =
+    let fetchAlpinePatch = name: sha256: fetchpatch {
+      url = "https://git.alpinelinux.org/cgit/aports/plain/main/net-snmp/${name}?id=f25d3fb08341b60b6ccef424399f060dfcf3f1a5";
+      inherit name sha256;
+    };
+  in [
+    (fetchAlpinePatch "CVE-2015-5621.patch" "05098jyvd9ddr5q26z7scbbvk1bk6x4agpjm6pyprvpc1zpi0y09")
+    (fetchAlpinePatch "fix-Makefile-PL.patch" "14ilnkj3cr6mpi242hrmmmv8nv4dj0fdgn42qfk9aa7scwsc0lc7")
+    (fetchAlpinePatch "fix-includes.patch" "0zpkbb6k366qpq4dax5wknwprhwnhighcp402mlm7950d39zfa3m")
+    (fetchAlpinePatch "netsnmp-swinst-crash.patch" "0gh164wy6zfiwiszh58fsvr25k0ns14r3099664qykgpmickkqid")
+    (fetchAlpinePatch "remove-U64-typedef.patch" "1msxyhcqkvhqa03dwb50288g7f6nbrcd9cs036m9xc8jdgjb8k8j")
+  ];
+
   preConfigure =
     ''
       perlversion=$(perl -e 'use Config; print $Config{version};')
diff --git a/pkgs/servers/nextcloud/default.nix b/pkgs/servers/nextcloud/default.nix
index d2e08932fe1d..2e423246c515 100644
--- a/pkgs/servers/nextcloud/default.nix
+++ b/pkgs/servers/nextcloud/default.nix
@@ -2,11 +2,11 @@
 
 stdenv.mkDerivation rec {
   name= "nextcloud-${version}";
-  version = "12.0.4";
+  version = "13.0.0";
 
   src = fetchurl {
     url = "https://download.nextcloud.com/server/releases/${name}.tar.bz2";
-    sha256 = "1dh9knqbw6ph2rfrb5rscdraj4375rqddmrifw6adyga9jkn2hb5";
+    sha256 = "38e6064432a2d1a044f219028d3fd46cb7a943a47e11eef346810bd289705aec";
   };
 
   installPhase = ''
diff --git a/pkgs/servers/nosql/arangodb/default.nix b/pkgs/servers/nosql/arangodb/default.nix
index 786b142c7329..238cd20d75e5 100644
--- a/pkgs/servers/nosql/arangodb/default.nix
+++ b/pkgs/servers/nosql/arangodb/default.nix
@@ -3,14 +3,14 @@
 
 let
 in stdenv.mkDerivation rec {
-  version = "3.2.3";
+  version = "3.3.3";
   name    = "arangodb-${version}";
 
   src = fetchFromGitHub {
     repo = "arangodb";
     owner = "arangodb";
     rev = "v${version}";
-    sha256 = "1ndd7wxw2lz1ywnz3kp0pz1jmby2jakhl00kn8jwghcbipvnx9b5";
+    sha256 = "0hw6yzxmhmnb7qz30pqjdbgin41w892pbf1xbl2821nsz9b290sd";
   };
 
   buildInputs = [
diff --git a/pkgs/servers/nosql/cassandra/2.1.nix b/pkgs/servers/nosql/cassandra/2.1.nix
index 3514ae84350d..fd3b2d3aa286 100644
--- a/pkgs/servers/nosql/cassandra/2.1.nix
+++ b/pkgs/servers/nosql/cassandra/2.1.nix
@@ -1,6 +1,6 @@
 { callPackage, ... } @ args:
 
 callPackage ./generic.nix (args // {
-  version = "2.1.15";
-  sha256 = "1yc6r4gmxz9c4zghzn6bz5wswz7dz61w7p4x9s5gqnixfp2mlapp";
+  version = "2.1.19";
+  sha256 = "1qlc62j3hf5831yrrbydn3z19zrn6bpirarinys6bmhshr7mhpyr";
 })
diff --git a/pkgs/servers/nosql/cassandra/2.2.nix b/pkgs/servers/nosql/cassandra/2.2.nix
index b467fcfdff5b..3d276128c00d 100644
--- a/pkgs/servers/nosql/cassandra/2.2.nix
+++ b/pkgs/servers/nosql/cassandra/2.2.nix
@@ -1,6 +1,6 @@
 { callPackage, ... } @ args:
 
 callPackage ./generic.nix (args // {
-  version = "2.2.9";
-  sha256 = "1wc2l8l7i43r0yc6qqi3wj4pm0969kjkh2pgx80wglzxm7275hv5";
+  version = "2.2.11";
+  sha256 = "0r39mm5ibdn9dqv11n4x33vcb5247r6fl6r07l6frqp6i36ilvl6";
 })
diff --git a/pkgs/servers/nosql/cassandra/3.0.nix b/pkgs/servers/nosql/cassandra/3.0.nix
index 04348568bafc..b6621ec95485 100644
--- a/pkgs/servers/nosql/cassandra/3.0.nix
+++ b/pkgs/servers/nosql/cassandra/3.0.nix
@@ -1,6 +1,6 @@
 { callPackage, ... } @ args:
 
 callPackage ./generic.nix (args // {
-  version = "3.0.9";
-  sha256 = "16jdh20cr4h47ldjqlnp2cdnb9zshqvnll6995s2a75d8m030c0g";
+  version = "3.0.15";
+  sha256 = "1n92wpp5gm41r4agjwjw9ymnnn114pmaqf04c1dx3fksk100wd5g";
 })
diff --git a/pkgs/servers/openafs-client/default.nix b/pkgs/servers/openafs-client/default.nix
deleted file mode 100644
index 232fb135bd80..000000000000
--- a/pkgs/servers/openafs-client/default.nix
+++ /dev/null
@@ -1,51 +0,0 @@
-{ stdenv, fetchurl, fetchgit, which, autoconf, automake, flex, yacc,
-  kernel, glibc, ncurses, perl, kerberos, fetchpatch }:
-
-stdenv.mkDerivation rec {
-  name = "openafs-${version}-${kernel.version}";
-  version = "1.6.22.1";
-
-  src = fetchurl {
-    url = "http://www.openafs.org/dl/openafs/${version}/openafs-${version}-src.tar.bz2";
-    sha256 = "19nfbksw7b34jc3mxjk7cbz26zg9k5myhzpv2jf0fnmznr47jqaw";
-  };
-
-  nativeBuildInputs = [ autoconf automake flex yacc perl which ] ++ kernel.moduleBuildDependencies;
-
-  buildInputs = [ ncurses ];
-
-  hardeningDisable = [ "pic" ];
-
-  preConfigure = ''
-    ln -s "${kernel.dev}/lib/modules/"*/build $TMP/linux
-
-    patchShebangs .
-    for i in `grep -l -R '/usr/\(include\|src\)' .`; do
-      echo "Patch /usr/include and /usr/src in $i"
-      substituteInPlace $i \
-        --replace "/usr/include" "${glibc.dev}/include" \
-        --replace "/usr/src" "$TMP"
-    done
-
-    ./regen.sh
-
-    ${stdenv.lib.optionalString (kerberos != null)
-      "export KRB5_CONFIG=${kerberos.dev}/bin/krb5-config"}
-
-    configureFlagsArray=(
-      "--with-linux-kernel-build=$TMP/linux"
-      ${stdenv.lib.optionalString (kerberos != null) "--with-krb5"}
-      "--sysconfdir=/etc/static"
-      "--disable-linux-d_splice-alias-extra-iput"
-    )
-  '';
-
-  meta = with stdenv.lib; {
-    description = "Open AFS client";
-    homepage = https://www.openafs.org;
-    license = licenses.ipl10;
-    platforms = platforms.linux;
-    maintainers = [ maintainers.z77z ];
-    broken = versionOlder kernel.version "3.18";
-  };
-}
diff --git a/pkgs/servers/openafs/default.nix b/pkgs/servers/openafs/default.nix
new file mode 100644
index 000000000000..3f92299c2a0a
--- /dev/null
+++ b/pkgs/servers/openafs/default.nix
@@ -0,0 +1,89 @@
+{ stdenv, fetchurl, fetchgit, which, autoconf, automake, flex, yacc
+, glibc, perl, kerberos, libxslt, docbook_xsl, docbook_xml_dtd_43
+, ncurses # Extra ncurses utilities. Only needed for debugging.
+, tsmbac ? null # Tivoli Storage Manager Backup Client from IBM
+}:
+
+with (import ./srcs.nix { inherit fetchurl; });
+
+stdenv.mkDerivation rec {
+  name = "openafs-${version}";
+  inherit version srcs;
+
+  nativeBuildInputs = [ autoconf automake flex yacc perl which libxslt ];
+
+  buildInputs = [ ncurses ];
+
+  patches = stdenv.lib.optional (tsmbac != null) ./tsmbac.patch;
+
+  outputs = [ "out" "dev" "man" "doc" ];
+
+  preConfigure = ''
+
+    patchShebangs .
+    for i in `grep -l -R '/usr/\(include\|src\)' .`; do
+      echo "Patch /usr/include and /usr/src in $i"
+      substituteInPlace $i \
+        --replace "/usr/include" "${glibc.dev}/include" \
+        --replace "/usr/src" "$TMP"
+    done
+
+    for i in ./doc/xml/{AdminGuide,QuickStartUnix,UserGuide}/*.xml; do
+      substituteInPlace "''${i}" --replace "http://www.oasis-open.org/docbook/xml/4.3/docbookx.dtd" \
+        "${docbook_xml_dtd_43}/xml/dtd/docbook/docbookx.dtd"
+    done
+
+    ./regen.sh
+
+    ${stdenv.lib.optionalString (kerberos != null)
+      "export KRB5_CONFIG=${kerberos.dev}/bin/krb5-config"}
+
+    export AFS_SYSKVERS=26
+
+    configureFlagsArray=(
+      ${stdenv.lib.optionalString (kerberos != null) "--with-krb5"}
+      "--sysconfdir=/etc"
+      "--localstatedir=/var"
+      "--disable-kernel-module"
+      "--disable-fuse-client"
+      "--with-html-xsl=${docbook_xsl}/share/xml/docbook-xsl/html/chunk.xsl"
+      ${stdenv.lib.optionalString (tsmbac != null) "--enable-tivoli-tsm"}
+      ${stdenv.lib.optionalString (ncurses == null) "--disable-gtx"}
+      "--disable-linux-d_splice-alias-extra-iput"
+    )
+  '' + stdenv.lib.optionalString (tsmbac != null) ''
+    export XBSA_CFLAGS="-Dxbsa -DNEW_XBSA -I${tsmbac}/lib64/sample -DXBSA_TSMLIB=\\\"${tsmbac}/lib64/libApiTSM64.so\\\""
+    export XBSA_XLIBS="-ldl"
+  '';
+
+  buildFlags = [ "all_nolibafs" ];
+
+  postBuild = ''
+    for d in doc/xml/{AdminGuide,QuickStartUnix,UserGuide}; do
+      make -C "''${d}" html
+    done
+  '';
+
+  postInstall = ''
+    mkdir -p $doc/share/doc/openafs/{AdminGuide,QuickStartUnix,UserGuide}
+    cp -r doc/{arch,examples,pdf,protocol,txt} README NEWS $doc/share/doc/openafs
+    for d in AdminGuide QuickStartUnix UserGuide ; do
+      cp "doc/xml/''${d}"/*.html "$doc/share/doc/openafs/''${d}"
+    done
+
+    rm -r $out/lib/{openafs,afs,*.a}
+    rm $out/bin/kpasswd
+    rm $out/sbin/{kas,kdb,ka-forwarder,kadb_check}
+    rm $out/libexec/openafs/kaserver
+    rm $man/share/man/man{1/kpasswd*,5/kaserver*,8/{ka*,kdb*}}
+  '';
+
+  meta = with stdenv.lib; {
+    outputsToInstall = [ "out" "doc" "man" ];
+    description = "Open AFS client";
+    homepage = https://www.openafs.org;
+    license = licenses.ipl10;
+    platforms = platforms.linux;
+    maintainers = [ maintainers.z77z maintainers.spacefrogg ];
+  };
+}
diff --git a/pkgs/servers/openafs/module.nix b/pkgs/servers/openafs/module.nix
new file mode 100644
index 000000000000..8cd9287a7772
--- /dev/null
+++ b/pkgs/servers/openafs/module.nix
@@ -0,0 +1,57 @@
+{ stdenv, fetchurl, which, autoconf, automake, flex, yacc
+, kernel, glibc, perl }:
+
+with (import ./srcs.nix { inherit fetchurl; });
+
+let
+  modDestDir = "$out/lib/modules/${kernel.modDirVersion}/extra/openafs";
+  kernelBuildDir = "${kernel.dev}/lib/modules/${kernel.modDirVersion}/build";
+
+in stdenv.mkDerivation rec {
+  name = "openafs-${version}-${kernel.version}";
+  inherit version src;
+
+  nativeBuildInputs = [ autoconf automake flex perl yacc which ] ++ kernel.moduleBuildDependencies;
+
+  hardeningDisable = [ "pic" ];
+
+  configureFlags = [
+    "--with-linux-kernel-build=${kernelBuildDir}"
+    "--sysconfdir=/etc"
+    "--localstatedir=/var"
+    "--disable-linux-d_splice-alias-extra-iput"
+  ];
+
+  preConfigure = ''
+    patchShebangs .
+    for i in `grep -l -R '/usr/\(include\|src\)' .`; do
+      echo "Patch /usr/include and /usr/src in $i"
+      substituteInPlace $i \
+        --replace "/usr/include" "${glibc.dev}/include" \
+        --replace "/usr/src" "${kernelBuildDir}"
+    done
+
+    ./regen.sh -q
+
+  '';
+
+  buildPhase = ''
+    make V=1 only_libafs
+  '';
+
+  installPhase = ''
+    mkdir -p ${modDestDir}
+    cp src/libafs/MODLOAD-*/libafs-${kernel.version}.* ${modDestDir}/libafs.ko
+    xz -f ${modDestDir}/libafs.ko
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Open AFS client kernel module";
+    homepage = https://www.openafs.org;
+    license = licenses.ipl10;
+    platforms = platforms.linux;
+    maintainers = [ maintainers.z77z maintainers.spacefrogg ];
+    broken = versionOlder kernel.version "3.18";
+  };
+
+}
diff --git a/pkgs/servers/openafs/srcs.nix b/pkgs/servers/openafs/srcs.nix
new file mode 100644
index 000000000000..9e9ff623e5cd
--- /dev/null
+++ b/pkgs/servers/openafs/srcs.nix
@@ -0,0 +1,14 @@
+{ fetchurl }:
+rec {
+  version = "1.6.22.2";
+  src = fetchurl {
+    url = "http://www.openafs.org/dl/openafs/${version}/openafs-${version}-src.tar.bz2";
+    sha256 = "15j17igignsfzv5jb47ryczsrz3zsmiqwnj38dx9gzz95807rkyf";
+  };
+
+  srcs = [ src
+    (fetchurl {
+      url = "http://www.openafs.org/dl/openafs/${version}/openafs-${version}-doc.tar.bz2";
+      sha256 = "1lpydca95nx5pmqvplb9n3akmxbzvhhypswh0s589ywxpv3zynxm";
+    })];
+}
diff --git a/pkgs/servers/openafs/tsmbac.patch b/pkgs/servers/openafs/tsmbac.patch
new file mode 100644
index 000000000000..412765fe8a5b
--- /dev/null
+++ b/pkgs/servers/openafs/tsmbac.patch
@@ -0,0 +1,62 @@
+diff -ru3 openafs-1.6.18.1/acinclude.m4 openafs-1.6.18.1.new/acinclude.m4
+--- openafs-1.6.18.1/acinclude.m4	2016-06-21 17:13:39.000000000 +0200
++++ openafs-1.6.18.1.new/acinclude.m4	2016-11-02 18:44:30.423039662 +0100
+@@ -1373,45 +1373,7 @@
+ 
+ dnl check for tivoli
+ AC_MSG_CHECKING(for tivoli tsm butc support)
+-XBSA_CFLAGS=""
+-if test "$enable_tivoli_tsm" = "yes"; then
+-	XBSADIR1=/usr/tivoli/tsm/client/api/bin/xopen
+-	XBSADIR2=/opt/tivoli/tsm/client/api/bin/xopen
+-	XBSADIR3=/usr/tivoli/tsm/client/api/bin/sample
+-	XBSADIR4=/opt/tivoli/tsm/client/api/bin/sample
+-	XBSADIR5=/usr/tivoli/tsm/client/api/bin64/sample
+-	XBSADIR6=/opt/tivoli/tsm/client/api/bin64/sample
+-
+-	if test -r "$XBSADIR3/dsmapifp.h"; then
+-		XBSA_CFLAGS="-Dxbsa -DNEW_XBSA -I$XBSADIR3"
+-		XBSA_XLIBS="-ldl"
+-		AC_MSG_RESULT([yes, $XBSA_CFLAGS])
+-	elif test -r "$XBSADIR4/dsmapifp.h"; then
+-		XBSA_CFLAGS="-Dxbsa -DNEW_XBSA -I$XBSADIR4"
+-		XBSA_XLIBS="-ldl"
+-		AC_MSG_RESULT([yes, $XBSA_CFLAGS])
+-	elif test -r "$XBSADIR5/dsmapifp.h"; then
+-		XBSA_CFLAGS="-Dxbsa -DNEW_XBSA -I$XBSADIR5"
+-		XBSA_XLIBS="-ldl"
+-		AC_MSG_RESULT([yes, $XBSA_CFLAGS])
+-	elif test -r "$XBSADIR6/dsmapifp.h"; then
+-		XBSA_CFLAGS="-Dxbsa -DNEW_XBSA -I$XBSADIR6"
+-		XBSA_XLIBS="-ldl"
+-		AC_MSG_RESULT([yes, $XBSA_CFLAGS])
+-	elif test -r "$XBSADIR1/xbsa.h"; then
+-		XBSA_CFLAGS="-Dxbsa -I$XBSADIR1"
+-		XBSA_XLIBS=""
+-		AC_MSG_RESULT([yes, $XBSA_CFLAGS])
+-	elif test -r "$XBSADIR2/xbsa.h"; then
+-		XBSA_CFLAGS="-Dxbsa -I$XBSADIR2"
+-		XBSA_XLIBS=""
+-		AC_MSG_RESULT([yes, $XBSA_CFLAGS])
+-	else
+-		AC_MSG_RESULT([no, missing xbsa.h and dsmapifp.h header files])
+-	fi
+-else
+-	AC_MSG_RESULT([no])
+-fi
++AC_MSG_RESULT([yes])
+ AC_SUBST(XBSA_CFLAGS)
+ AC_SUBST(XBSA_XLIBS) 
+ 
+diff -ru3 openafs-1.6.18.1/src/butc/afsxbsa.c openafs-1.6.18.1.new/src/butc/afsxbsa.c
+--- openafs-1.6.18.1/src/butc/afsxbsa.c	2016-06-21 17:13:39.000000000 +0200
++++ openafs-1.6.18.1.new/src/butc/afsxbsa.c	2016-11-02 18:45:10.734662987 +0100
+@@ -651,7 +651,7 @@
+ #if defined(AFS_AIX_ENV)
+         dynlib = dlopen("/usr/lib/libApiDS.a(dsmapish.o)", RTLD_NOW | RTLD_LOCAL | RTLD_MEMBER);
+ #elif defined (AFS_AMD64_LINUX26_ENV)
+-	dynlib = dlopen("/usr/lib64/libApiTSM64.so", RTLD_NOW | RTLD_LOCAL);
++	dynlib = dlopen(XBSA_TSMLIB, RTLD_NOW | RTLD_LOCAL);
+ #elif defined(AFS_SUN5_ENV) || defined(AFS_LINUX26_ENV)
+         dynlib = dlopen("/usr/lib/libApiDS.so", RTLD_NOW | RTLD_LOCAL);
+ #else
diff --git a/pkgs/servers/polipo/default.nix b/pkgs/servers/polipo/default.nix
index 1ca18d7d3a74..a7a0791b8520 100644
--- a/pkgs/servers/polipo/default.nix
+++ b/pkgs/servers/polipo/default.nix
@@ -18,5 +18,8 @@ stdenv.mkDerivation rec {
     license = licenses.mit;
     maintainers = with maintainers; [ phreedom ehmry ];
     platforms = platforms.all;
+    knownVulnerabilities = [
+      "Unmaintained upstream: https://github.com/jech/polipo/commit/4d42ca1b5849"
+    ];
   };
-}
\ No newline at end of file
+}
diff --git a/pkgs/servers/pulseaudio/default.nix b/pkgs/servers/pulseaudio/default.nix
index 85ee3ddcf744..2f102b58f141 100644
--- a/pkgs/servers/pulseaudio/default.nix
+++ b/pkgs/servers/pulseaudio/default.nix
@@ -43,7 +43,12 @@ stdenv.mkDerivation rec {
     sha256 = "0sf92knqkvqmfhrbz4vlsagzqlps72wycpmln5dygicg07a0a8q7";
   };
 
-  patches = [ ./caps-fix.patch ];
+  patches = [ ./caps-fix.patch ]
+    ++ stdenv.lib.optional stdenv.hostPlatform.isMusl (fetchpatch {
+      name = "padsp-fix.patch";
+      url = "https://git.alpinelinux.org/cgit/aports/plain/testing/pulseaudio/0001-padsp-Make-it-compile-on-musl.patch?id=167be02bf4618a90328e2b234f6a63a5dc05f244";
+      sha256 = "0gf4w25zi123ghk0njapysvrlljkc3hyanacgiswfnnm1i8sab1q";
+    });
 
   outputs = [ "out" "dev" ];
 
diff --git a/pkgs/servers/simplehttp2server/default.nix b/pkgs/servers/simplehttp2server/default.nix
new file mode 100644
index 000000000000..083a224d1558
--- /dev/null
+++ b/pkgs/servers/simplehttp2server/default.nix
@@ -0,0 +1,25 @@
+{ stdenv, buildGoPackage, fetchFromGitHub }:
+
+buildGoPackage rec {
+  name = "simplehttp2server-${version}";
+  version = "3.1.3";
+
+  goPackagePath = "github.com/GoogleChromeLabs/simplehttp2server";
+
+  src = fetchFromGitHub {
+     owner = "GoogleChromeLabs";
+     repo = "simplehttp2server";
+     rev = version;
+     sha256 = "113mcfvy1m91wask5039mhr0187nlw325ac32785yl4bb4igi8aw";
+  };
+
+  goDeps = ./deps.nix;
+
+  meta = with stdenv.lib; {
+     homepage = https://github.com/GoogleChromeLabs/simplehttp2server;
+     description = "HTTP/2 server for development purposes";
+     license = licenses.asl20;
+     maintainers = with maintainers; [ yrashk ];
+  };
+
+}
diff --git a/pkgs/servers/simplehttp2server/deps.nix b/pkgs/servers/simplehttp2server/deps.nix
new file mode 100644
index 000000000000..e6a26bf2506c
--- /dev/null
+++ b/pkgs/servers/simplehttp2server/deps.nix
@@ -0,0 +1,12 @@
+# This file was generated by https://github.com/kamilchm/go2nix v1.2.1
+[
+  {
+    goPackagePath = "github.com/NYTimes/gziphandler";
+    fetch = {
+      type = "git";
+      url = "https://github.com/NYTimes/gziphandler";
+      rev = "289a3b81f5aedc99f8d6eb0f67827c142f1310d8";
+      sha256 = "1r9ly9wdqjcc4nwv71mfldf1f5cjm4r34vvkdm5wabmdqqqwkbyx";
+    };
+  }
+]
diff --git a/pkgs/servers/softether/4.25.nix b/pkgs/servers/softether/4.25.nix
new file mode 100644
index 000000000000..b1e9c5c1a455
--- /dev/null
+++ b/pkgs/servers/softether/4.25.nix
@@ -0,0 +1,53 @@
+{ stdenv, fetchurl
+, openssl, readline, ncurses, zlib }:
+
+let
+  os = if stdenv.isLinux then "1"
+       else if stdenv.isFreeBSD then "2"
+       else if stdenv.isSunOS then "3"
+       else if stdenv.isDarwin then "4"
+       else if stdenv.isOpenBSD then "5"
+       else "";
+  cpuBits = if stdenv.is64bit then "2" else "1";
+
+in
+
+stdenv.mkDerivation rec {
+  name = "softether-${version}";
+  version = "4.25";
+  build = "9656";
+  compiledDate = "2018.01.15";
+  dataDir = "/var/lib/softether";
+
+  src = fetchurl {
+    url = "http://www.softether-download.com/files/softether/v${version}-${build}-rtm-${compiledDate}-tree/Source_Code/softether-src-v${version}-${build}-rtm.tar.gz";
+    sha256 = "1y1m8lf0xfh7m70d15wj2jjf5a5qhi3j49ciwqmsscsqvb1xwimr";
+  };
+
+  buildInputs = [ openssl readline ncurses zlib ];
+
+  preConfigure = ''
+      echo "${os}
+      ${cpuBits}
+      " | ./configure
+      rm configure
+  '';
+
+  buildPhase = ''
+      mkdir -p $out/bin
+      sed -i \
+          -e "/INSTALL_BINDIR=/s|/usr/bin|/bin|g" \
+          -e "/_DIR=/s|/usr|${dataDir}|g" \
+          -e "s|\$(INSTALL|$out/\$(INSTALL|g" \
+          -e "/echo/s|echo $out/|echo |g" \
+          Makefile
+  '';
+
+  meta = with stdenv.lib; {
+    description = "An Open-Source Free Cross-platform Multi-protocol VPN Program";
+    homepage = https://www.softether.org/;
+    license = licenses.gpl2;
+    maintainers = [ maintainers.rick68 ];
+    platforms = platforms.linux;
+  };
+}
diff --git a/pkgs/servers/sql/mariadb/default.nix b/pkgs/servers/sql/mariadb/default.nix
index 88d2ae3d68a7..25fee035cd5d 100644
--- a/pkgs/servers/sql/mariadb/default.nix
+++ b/pkgs/servers/sql/mariadb/default.nix
@@ -15,11 +15,11 @@ mariadb = everything // {
 };
 
 common = rec { # attributes common to both builds
-  version = "10.2.12";
+  version = "10.2.13";
 
   src = fetchurl {
     url    = "https://downloads.mariadb.org/f/mariadb-${version}/source/mariadb-${version}.tar.gz";
-    sha256 = "1v21sc1y5qndwdbr921da1s009bkn6pshwcgw47w7aygp9zjvcia";
+    sha256 = "0ly7dxc7rk327liya4kalgsw8irlxl0pl8gq0agdl18a63cpwbi7";
     name   = "mariadb-${version}.tar.gz";
   };
 
@@ -62,6 +62,7 @@ common = rec { # attributes common to both builds
     "-DPLUGIN_AUTH_GSSAPI_CLIENT=NO"
   ]
     ++ optional stdenv.isDarwin "-DCURSES_LIBRARY=${ncurses.out}/lib/libncurses.dylib"
+    ++ optional stdenv.hostPlatform.isMusl "-DWITHOUT_TOKUDB=1" # mariadb docs say disable this for musl
     ;
 
   preConfigure = ''
diff --git a/pkgs/servers/sql/postgresql/default.nix b/pkgs/servers/sql/postgresql/default.nix
index 1a721e90a8df..02a620cee531 100644
--- a/pkgs/servers/sql/postgresql/default.nix
+++ b/pkgs/servers/sql/postgresql/default.nix
@@ -69,7 +69,7 @@ let
         fi
       '';
 
-    postFixup = lib.optionalString (!stdenv.isDarwin)
+    postFixup = lib.optionalString (!stdenv.isDarwin && stdenv.hostPlatform.libc == "glibc")
       ''
         # initdb needs access to "locale" command from glibc.
         wrapProgram $out/bin/initdb --prefix PATH ":" ${glibc.bin}/bin
diff --git a/pkgs/servers/squid/4.nix b/pkgs/servers/squid/4.nix
index f0429475be27..777e910038a8 100644
--- a/pkgs/servers/squid/4.nix
+++ b/pkgs/servers/squid/4.nix
@@ -2,17 +2,21 @@
 , expat, libxml2, openssl }:
 
 stdenv.mkDerivation rec {
-  name = "squid-4.0.21";
+  name = "squid-4.0.23";
 
   src = fetchurl {
     url = "http://www.squid-cache.org/Versions/v4/${name}.tar.xz";
-    sha256 = "0cwfj3qpl72k5l1h2rvkv1xg0720rifk4wcvi49z216hznyqwk8m";
+    sha256 = "0a8g0zs3xayfkxl8maq823b14lckvh9d5lf7ryh9rx303xh1mdqq";
   };
 
   buildInputs = [
     perl openldap db cyrus_sasl expat libxml2 openssl
   ] ++ stdenv.lib.optionals stdenv.isLinux [ libcap pam ];
 
+  prePatch = ''
+    substituteInPlace configure --replace "/usr/local/include/libxml2" "${libxml2.dev}/include/libxml2"
+  '';
+
   configureFlags = [
     "--enable-ipv6"
     "--disable-strict-error-checking"
@@ -23,9 +27,7 @@ stdenv.mkDerivation rec {
     "--enable-removal-policies=lru,heap"
     "--enable-delay-pools"
     "--enable-x-accelerator-vary"
-  ] ++ stdenv.lib.optionals stdenv.isLinux [
-    "--enable-linux-netfilter"
-  ];
+  ] ++ stdenv.lib.optional (stdenv.isLinux && !stdenv.hostPlatform.isMusl) "--enable-linux-netfilter";
 
   meta = with stdenv.lib; {
     description = "A caching proxy for the Web supporting HTTP, HTTPS, FTP, and more";
diff --git a/pkgs/servers/squid/default.nix b/pkgs/servers/squid/default.nix
index 7f1c97bd642b..8d39fbbcef44 100644
--- a/pkgs/servers/squid/default.nix
+++ b/pkgs/servers/squid/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, perl, openldap, pam, db, cyrus_sasl, libcap
+{ stdenv, fetchurl, fetchpatch, perl, openldap, pam, db, cyrus_sasl, libcap
 , expat, libxml2, openssl }:
 
 stdenv.mkDerivation rec {
@@ -13,6 +13,19 @@ stdenv.mkDerivation rec {
     perl openldap db cyrus_sasl expat libxml2 openssl
   ] ++ stdenv.lib.optionals stdenv.isLinux [ libcap pam ];
 
+  patches = [
+    (fetchpatch {
+      name = "CVE-2018-1000024.patch";
+      url = http://www.squid-cache.org/Versions/v3/3.5/changesets/SQUID-2018_1.patch;
+      sha256 = "0vzxr4rmybz0w4c1hi3szvqawbzl4r4b8wyvq9vgq1mzkk5invpg";
+    })
+    (fetchpatch {
+      name = "CVE-2018-1000027.patch";
+      url = http://www.squid-cache.org/Versions/v3/3.5/changesets/SQUID-2018_2.patch;
+      sha256 = "1a8hwk9z7h1j0c57anfzp3bwjd4pjbyh8aks4ca79nwz4d0y6wf3";
+    })
+  ];
+
   configureFlags = [
     "--enable-ipv6"
     "--disable-strict-error-checking"
@@ -23,9 +36,7 @@ stdenv.mkDerivation rec {
     "--enable-removal-policies=lru,heap"
     "--enable-delay-pools"
     "--enable-x-accelerator-vary"
-  ] ++ stdenv.lib.optionals stdenv.isLinux [
-    "--enable-linux-netfilter"
-  ];
+  ] ++ stdenv.lib.optional (stdenv.isLinux && !stdenv.hostPlatform.isMusl) "--enable-linux-netfilter";
 
   meta = with stdenv.lib; {
     description = "A caching proxy for the Web supporting HTTP, HTTPS, FTP, and more";
diff --git a/pkgs/servers/unifi/default.nix b/pkgs/servers/unifi/default.nix
index d4a0145e9b99..040a2ece303f 100644
--- a/pkgs/servers/unifi/default.nix
+++ b/pkgs/servers/unifi/default.nix
@@ -6,11 +6,11 @@
 
 stdenv.mkDerivation rec {
   name = "unifi-controller-${version}";
-  version = "5.6.29";
+  version = "5.6.30";
 
   src = fetchurl {
     url = "https://dl.ubnt.com/unifi/${version}/unifi_sysvinit_all.deb";
-    sha256 = "05na94mrd1dy95vnwd1ycqx4i38wf0lg67sjg263ilq5l1prdmz8";
+    sha256 = "083bh29i7dpn0ajc6h584vhkybiavnln3xndpb670chfrbywxyj4";
   };
 
   buildInputs = [ dpkg ];
diff --git a/pkgs/servers/varnish/default.nix b/pkgs/servers/varnish/default.nix
index 468cc86d8893..9efb4e4dfe5a 100644
--- a/pkgs/servers/varnish/default.nix
+++ b/pkgs/servers/varnish/default.nix
@@ -2,12 +2,12 @@
 , python, pythonPackages, makeWrapper }:
 
 stdenv.mkDerivation rec {
-  version = "5.1.3";
+  version = "5.2.1";
   name = "varnish-${version}";
 
   src = fetchurl {
-    url = "http://repo.varnish-cache.org/source/${name}.tar.gz";
-    sha256 = "0km50hzjzi1kq85lr3hq519nrp261wb91ixq48vhyd41llycjfbl";
+    url = "http://varnish-cache.org/_downloads/${name}.tgz";
+    sha256 = "1cqlj12m426c1lak1hr1fx5zcfsjjvka3hfirz47hvy1g2fjqidq";
   };
 
   nativeBuildInputs = [ pkgconfig ];
@@ -32,6 +32,6 @@ stdenv.mkDerivation rec {
     homepage = https://www.varnish-cache.org;
     license = licenses.bsd2;
     maintainers = with maintainers; [ garbas fpletz ];
-    platforms = platforms.linux ++ platforms.darwin;
+    platforms = platforms.unix;
   };
 }
diff --git a/pkgs/servers/varnish/modules.nix b/pkgs/servers/varnish/modules.nix
index c37fae4ba3d2..8fdcf63e5b9a 100644
--- a/pkgs/servers/varnish/modules.nix
+++ b/pkgs/servers/varnish/modules.nix
@@ -1,17 +1,19 @@
-{ stdenv, fetchurl, pkgconfig, varnish, python, docutils }:
+{ stdenv, fetchurl, pkgconfig, varnish, python, docutils, removeReferencesTo }:
 
 stdenv.mkDerivation rec {
-  version = "0.10.2";
+  version = "0.13.0";
   name = "varnish-modules-${version}";
 
   src = fetchurl {
     url = "https://download.varnish-software.com/varnish-modules/varnish-modules-${version}.tar.gz";
-    sha256 = "0inw76pm8kcidh0lq7gm3c3bh8v6yps0z7j6ar617b8wf730w1im";
+    sha256 = "1nj52va7cp0swcv87zd3si80knpaa4a7na37cy9wkvgyvhf9k8mh";
   };
 
-  nativeBuildInputs = [ pkgconfig docutils ];
+  nativeBuildInputs = [ pkgconfig docutils removeReferencesTo ];
   buildInputs = [ varnish python ];
 
+  postInstall = "find $out -type f -exec remove-references-to -t ${varnish.dev} '{}' +"; # varnish.dev captured only as __FILE__ in assert messages
+
   meta = with stdenv.lib; {
     description = "Collection of Varnish Cache modules (vmods) by Varnish Software";
     homepage = https://github.com/varnish/varnish-modules;
diff --git a/pkgs/servers/varnish/rtstatus.nix b/pkgs/servers/varnish/rtstatus.nix
index 1efa6d5e7989..e92559f038d8 100644
--- a/pkgs/servers/varnish/rtstatus.nix
+++ b/pkgs/servers/varnish/rtstatus.nix
@@ -17,5 +17,6 @@ stdenv.mkDerivation rec {
     description = "Varnish realtime status page";
     homepage = https://github.com/varnish/libvmod-rtstatus;
     inherit (varnish.meta) license platforms maintainers;
+    broken = true; # it has not ported to varnish 5.2 yet (5.1 is ok)
   };
 }
diff --git a/pkgs/servers/web-apps/searx/default.nix b/pkgs/servers/web-apps/searx/default.nix
index 28eeeb112591..ac60827aeb7b 100644
--- a/pkgs/servers/web-apps/searx/default.nix
+++ b/pkgs/servers/web-apps/searx/default.nix
@@ -42,6 +42,6 @@ buildPythonApplication rec {
     homepage = https://github.com/asciimoo/searx;
     description = "A privacy-respecting, hackable metasearch engine";
     license = licenses.agpl3Plus;
-    maintainers = with maintainers; [ matejc fpletz profpatsch ];
+    maintainers = with maintainers; [ matejc fpletz ];
   };
 }
diff --git a/pkgs/servers/web-apps/wallabag/default.nix b/pkgs/servers/web-apps/wallabag/default.nix
index e6137a2db7c2..07b530f4ef72 100644
--- a/pkgs/servers/web-apps/wallabag/default.nix
+++ b/pkgs/servers/web-apps/wallabag/default.nix
@@ -13,13 +13,11 @@ stdenv.mkDerivation rec {
 
   outputs = [ "out" ];
 
-  patchPhase = ''
+  patches = [ ./wallabag-data.patch ]; # exposes $WALLABAG_DATA
+
+  prePatch = ''
     rm Makefile # use the "shared hosting" package with bundled dependencies
-    substituteInPlace app/AppKernel.php \
-      --replace "__DIR__" "getenv('WALLABAG_DATA')"
-    substituteInPlace var/bootstrap.php.cache \
-      --replace "\$this->rootDir = \$this->getRootDir()" "\$this->rootDir = getenv('WALLABAG_DATA')"
-  ''; # exposes $WALLABAG_DATA
+  '';
 
   installPhase = ''
     mkdir $out/
@@ -31,11 +29,12 @@ stdenv.mkDerivation rec {
     longDescription = ''
       wallabag is a self hostable application for saving web pages.
 
-      To use, point the environment variable $WALLABAG_DATA to a directory called `app` that contains the folder `config` with wallabag's configuration files. These need to be updated every package upgrade. In `app`'s parent folder, a directory called `var` containing wallabag's data will be created.
+      Point the environment variable $WALLABAG_DATA to a data directory that contains the folder `app/config` which must be a clone of wallabag's configuration files with your customized `parameters.yml`. These need to be updated every package upgrade.
       After a package upgrade, empty the `var/cache` folder.
     '';
     license = licenses.mit;
     homepage = http://wallabag.org;
+    maintainers = with maintainers; [ schneefux ];
     platforms = platforms.all;
   };
 }
diff --git a/pkgs/servers/web-apps/wallabag/wallabag-data.patch b/pkgs/servers/web-apps/wallabag/wallabag-data.patch
new file mode 100644
index 000000000000..086e93959800
--- /dev/null
+++ b/pkgs/servers/web-apps/wallabag/wallabag-data.patch
@@ -0,0 +1,26 @@
+diff --git a/app/AppKernel.php b/app/AppKernel.php
+index 40726f05..7d44e600 100644
+--- a/app/AppKernel.php
++++ b/app/AppKernel.php
+@@ -58,14 +58,19 @@ class AppKernel extends Kernel
+         return $bundles;
+     }
+ 
++    public function getProjectDir()
++    {
++        return getenv('WALLABAG_DATA') ?: dirname(__DIR__);
++    }
++
+     public function getCacheDir()
+     {
+-        return dirname(__DIR__) . '/var/cache/' . $this->getEnvironment();
++        return $this->getProjectDir() . '/var/cache/' . $this->getEnvironment();
+     }
+ 
+     public function getLogDir()
+     {
+-        return dirname(__DIR__) . '/var/logs';
++        return $this->getProjectDir() . '/var/logs';
+     }
+ 
+     public function registerContainerConfiguration(LoaderInterface $loader)
diff --git a/pkgs/servers/x11/quartz-wm/default.nix b/pkgs/servers/x11/quartz-wm/default.nix
index 45e4df2bb8b9..d724a81debbb 100644
--- a/pkgs/servers/x11/quartz-wm/default.nix
+++ b/pkgs/servers/x11/quartz-wm/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, lib, fetchurl, xorg, pixman, pkgconfig, AppKit, Xplugin }:
+{ stdenv, lib, fetchurl, xorg, pixman, pkgconfig, AppKit, Xplugin, darwin }:
 
 let version = "1.3.1";
 in stdenv.mkDerivation {
@@ -19,13 +19,11 @@ in stdenv.mkDerivation {
     xorg.libXext
     pixman
     pkgconfig
-    AppKit Xplugin
+    AppKit Xplugin darwin.apple_sdk.frameworks.Foundation
   ];
-  NIX_CFLAGS_COMPILE = "-F/System/Library/Frameworks -I/usr/include";
-  NIX_LDFLAGS = stdenv.lib.optional stdenv.isDarwin
-    "/System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation";
   meta = with lib; {
     license = licenses.apsl20;
     platforms = platforms.darwin;
+    maintainers = with maintainers; [ matthewbauer ];
   };
 }
diff --git a/pkgs/servers/x11/xorg/overrides.nix b/pkgs/servers/x11/xorg/overrides.nix
index f56d22d7b7ee..c6466598195e 100644
--- a/pkgs/servers/x11/xorg/overrides.nix
+++ b/pkgs/servers/x11/xorg/overrides.nix
@@ -493,6 +493,9 @@ in
           args.udev
         ];
         patches = commonPatches;
+        prePatch = stdenv.lib.optionalString stdenv.hostPlatform.isMusl ''
+          export CFLAGS+=" -D__uid_t=uid_t -D__gid_t=gid_t"
+        '';
         configureFlags = [
           "--enable-kdrive"             # not built by default
           "--enable-xephyr"
diff --git a/pkgs/shells/bash/4.4.nix b/pkgs/shells/bash/4.4.nix
index 5635c6a73bed..63c7fbc7a0e0 100644
--- a/pkgs/shells/bash/4.4.nix
+++ b/pkgs/shells/bash/4.4.nix
@@ -1,5 +1,5 @@
 { stdenv, buildPackages
-, fetchurl, readline70 ? null, texinfo ? null, binutils ? null, bison
+, fetchurl, readline70 ? null, texinfo ? null, binutils ? null, bison, autoconf
 , buildPlatform, hostPlatform
 , interactive ? false
 }:
@@ -51,7 +51,12 @@ stdenv.mkDerivation rec {
 
   patchFlags = "-p0";
 
-  patches = upstreamPatches;
+  patches = upstreamPatches
+    # https://lists.gnu.org/archive/html/bug-bash/2016-10/msg00006.html
+    ++ optional (hostPlatform.libc == "musl") (fetchurl {
+      url = "https://lists.gnu.org/archive/html/bug-bash/2016-10/patchJxugOXrY2y.patch";
+      sha256 = "1m4v9imidb1cc1h91f2na0b8y9kc5c5fgmpvy9apcyv2kbdcghg1";
+  });
 
   postPatch = optionalString hostPlatform.isCygwin "patch -p2 < ${./cygwin-bash-4.4.11-2.src.patch}";
 
@@ -65,13 +70,17 @@ stdenv.mkDerivation rec {
     "bash_cv_dev_stdin=present"
     "bash_cv_dev_fd=standard"
     "bash_cv_termcap_lib=libncurses"
+  ] ++ optionals (hostPlatform.libc == "musl") [
+    "--without-bash-malloc"
+    "--disable-nls"
   ];
 
   # Note: Bison is needed because the patches above modify parse.y.
   depsBuildBuild = [ buildPackages.stdenv.cc ];
   nativeBuildInputs = [bison]
     ++ optional (texinfo != null) texinfo
-    ++ optional hostPlatform.isDarwin binutils;
+    ++ optional hostPlatform.isDarwin binutils
+    ++ optional (hostPlatform.libc == "musl") autoconf;
 
   buildInputs = optional interactive readline70;
 
@@ -86,7 +95,7 @@ stdenv.mkDerivation rec {
 
   postInstall = ''
     ln -s bash "$out/bin/sh"
-    rm $out/lib/bash/Makefile.inc
+    rm -f $out/lib/bash/Makefile.inc
   '';
 
   postFixup = if interactive
@@ -96,7 +105,7 @@ stdenv.mkDerivation rec {
     ''
     # most space is taken by locale data
     else ''
-      rm -r "$out/share" "$out/bin/bashbug"
+      rm -rf "$out/share" "$out/bin/bashbug"
     '';
 
   meta = with stdenv.lib; {
diff --git a/pkgs/shells/fish/default.nix b/pkgs/shells/fish/default.nix
index 490832d31d8b..d6c107e99532 100644
--- a/pkgs/shells/fish/default.nix
+++ b/pkgs/shells/fish/default.nix
@@ -1,6 +1,6 @@
 { stdenv, fetchurl, coreutils, utillinux,
   nettools, kbd, bc, which, gnused, gnugrep,
-  groff, man-db, glibc, libiconv, pcre2,
+  groff, man-db, getent, libiconv, pcre2,
   gettext, ncurses, python3
 
   , writeText
@@ -142,7 +142,7 @@ let
       sed -e "s| ul| ${utillinux}/bin/ul|" \
           -i "$out/share/fish/functions/__fish_print_help.fish"
       for cur in $out/share/fish/functions/*.fish; do
-        sed -e "s|/usr/bin/getent|${glibc.bin}/bin/getent|" \
+        sed -e "s|/usr/bin/getent|${getent}/bin/getent|" \
             -i "$cur"
       done
 
diff --git a/pkgs/shells/nix-bash-completions/default.nix b/pkgs/shells/nix-bash-completions/default.nix
index bb945f404215..fb6fa24ac334 100644
--- a/pkgs/shells/nix-bash-completions/default.nix
+++ b/pkgs/shells/nix-bash-completions/default.nix
@@ -1,14 +1,14 @@
 { stdenv, fetchFromGitHub }:
 
 stdenv.mkDerivation rec {
-  version = "0.6.2";
+  version = "0.6.3";
   name = "nix-bash-completions-${version}";
 
   src = fetchFromGitHub {
     owner = "hedning";
     repo = "nix-bash-completions";
     rev = "v${version}";
-    sha256 = "0w6mimi70drjkdpx5pcw66xy2a4kysjfzmank0kc5vbhrjgkjwyp";
+    sha256 = "1zmk9f53xpwk5j6qqisjlddgm2fr68p1q6pn3wa14bd777lranhj";
   };
 
   # To enable lazy loading via. bash-completion we need a symlink to the script
diff --git a/pkgs/shells/nix-zsh-completions/default.nix b/pkgs/shells/nix-zsh-completions/default.nix
index 29fb065a6f8b..2bcff6b809dc 100644
--- a/pkgs/shells/nix-zsh-completions/default.nix
+++ b/pkgs/shells/nix-zsh-completions/default.nix
@@ -1,7 +1,7 @@
 { stdenv, fetchFromGitHub }:
 
 let
-  version = "0.3.7";
+  version = "0.3.8";
 in
 
 stdenv.mkDerivation rec {
@@ -11,7 +11,7 @@ stdenv.mkDerivation rec {
     owner = "spwhitt";
     repo = "nix-zsh-completions";
     rev = "${version}";
-    sha256 = "164x8awia56z481r898pbywjgrx8fv8gfw8pxp4qgbxzp3gwq9iy";
+    sha256 = "05ynd38br2kn657g7l01jg1q8ja9xwrdyb95w02gh7j9cww2k06w";
   };
 
   installPhase = ''
diff --git a/pkgs/shells/oh-my-zsh/default.nix b/pkgs/shells/oh-my-zsh/default.nix
index 3374f32738c0..8cfcb9ecbbea 100644
--- a/pkgs/shells/oh-my-zsh/default.nix
+++ b/pkgs/shells/oh-my-zsh/default.nix
@@ -4,13 +4,13 @@
 { stdenv, fetchgit }:
 
 stdenv.mkDerivation rec {
-  version = "2017-12-14";
+  version = "2018-01-22";
   name = "oh-my-zsh-${version}";
 
   src = fetchgit {
     url = "https://github.com/robbyrussell/oh-my-zsh";
-    rev = "c3b072eace1ce19a48e36c2ead5932ae2d2e06d9";
-    sha256 = "14nmql4527l4qs4rxb5gczb8cklz8s682ly0l0nmqh36cmvaqx8y";
+    rev = "37c2d0ddd751e15d0c87a51e2d9f9849093571dc";
+    sha256 = "0x2r7205ps5v5bl1f9vdnry9gxflypaahz49cnhq5f5klb49bakn";
   };
 
   pathsToLink = [ "/share/oh-my-zsh" ];
diff --git a/pkgs/shells/zsh/default.nix b/pkgs/shells/zsh/default.nix
index 4b2b79a21046..43b766fdaf2e 100644
--- a/pkgs/shells/zsh/default.nix
+++ b/pkgs/shells/zsh/default.nix
@@ -20,15 +20,19 @@ stdenv.mkDerivation {
 
   buildInputs = [ ncurses pcre ];
 
+  configureFlags = [
+    "--enable-maildir-support"
+    "--enable-multibyte"
+    "--with-tcsetpgrp"
+    "--enable-pcre"
+  ];
   preConfigure = ''
-    configureFlags="--enable-maildir-support --enable-multibyte --enable-zprofile=$out/etc/zprofile --with-tcsetpgrp --enable-pcre"
+    configureFlagsArray+=(--enable-zprofile=$out/etc/zprofile)
   '';
 
   # the zsh/zpty module is not available on hydra
   # so skip groups Y Z
-  checkFlagsArray = ''
-    (TESTNUM=A TESTNUM=B TESTNUM=C TESTNUM=D TESTNUM=E TESTNUM=V TESTNUM=W)
-  '';
+  checkFlags = map (T: "TESTNUM=${T}") (stdenv.lib.stringToCharacters "ABCDEVW");
 
   # XXX: think/discuss about this, also with respect to nixos vs nix-on-X
   postInstall = ''
diff --git a/pkgs/stdenv/adapters.nix b/pkgs/stdenv/adapters.nix
index f7d2c49a66d6..3090b6283e93 100644
--- a/pkgs/stdenv/adapters.nix
+++ b/pkgs/stdenv/adapters.nix
@@ -94,7 +94,7 @@ rec {
               # without proper `file` command, libtool sometimes fails
               # to recognize 64-bit DLLs
             ++ stdenv.lib.optional (hostPlatform.config == "x86_64-w64-mingw32") pkgs.file
-            ++ stdenv.lib.optional hostPlatform.isAarch64 pkgs.updateAutotoolsGnuConfigScriptsHook
+            ++ stdenv.lib.optional (hostPlatform.isAarch64 || hostPlatform.libc == "musl") pkgs.updateAutotoolsGnuConfigScriptsHook
             ;
 
           crossConfig = hostPlatform.config;
diff --git a/pkgs/stdenv/darwin/default.nix b/pkgs/stdenv/darwin/default.nix
index 28b2f203dae5..27b3c176a2a7 100644
--- a/pkgs/stdenv/darwin/default.nix
+++ b/pkgs/stdenv/darwin/default.nix
@@ -118,6 +118,7 @@ in rec {
         initialPath  = [ bootstrapTools ];
 
         fetchurlBoot = import ../../build-support/fetchurl {
+          inherit lib;
           stdenvNoCC = stage0.stdenv;
           curl = bootstrapTools;
         };
diff --git a/pkgs/stdenv/darwin/make-bootstrap-tools.nix b/pkgs/stdenv/darwin/make-bootstrap-tools.nix
index 6fb37f249144..6fc9d7f0c101 100644
--- a/pkgs/stdenv/darwin/make-bootstrap-tools.nix
+++ b/pkgs/stdenv/darwin/make-bootstrap-tools.nix
@@ -15,8 +15,8 @@ in rec {
   # Avoid debugging larger changes for now.
   bzip2_ = bzip2.override (args: { linkStatic = true; });
 
-  # Avoid messing with libkrb5.
-  curl_ = curl.override (args: { gssSupport = false; });
+  # Avoid messing with libkrb5 and libnghttp2.
+  curl_ = curl.override (args: { gssSupport = false; http2Support = false; });
 
   build = stdenv.mkDerivation {
     name = "stdenv-bootstrap-tools";
diff --git a/pkgs/stdenv/freebsd/default.nix b/pkgs/stdenv/freebsd/default.nix
index 6ab8bf217269..b3a6cedad841 100644
--- a/pkgs/stdenv/freebsd/default.nix
+++ b/pkgs/stdenv/freebsd/default.nix
@@ -29,7 +29,8 @@ let inherit (localSystem) system; in
     inherit bootstrapTools;
 
     fetchurl = import ../../build-support/fetchurl {
-      inherit stdenv;
+      inherit lib;
+      stdenvNoCC = stdenv;
       curl = bootstrapTools;
     };
 
diff --git a/pkgs/stdenv/generic/check-meta.nix b/pkgs/stdenv/generic/check-meta.nix
index 745ad14bc08b..93d0f4cc9805 100644
--- a/pkgs/stdenv/generic/check-meta.nix
+++ b/pkgs/stdenv/generic/check-meta.nix
@@ -96,8 +96,7 @@ let
     ''
 
       Known issues:
-
-    '' + (lib.fold (issue: default: "${default} - ${issue}\n") "" attrs.meta.knownVulnerabilities) + ''
+    '' + (lib.concatStrings (map (issue: " - ${issue}\n") attrs.meta.knownVulnerabilities)) + ''
 
         You can install it anyway by whitelisting this package, using the
         following methods:
@@ -160,7 +159,7 @@ let
     executables = listOf str;
     outputsToInstall = listOf str;
     position = str;
-    evaluates = bool;
+    available = bool;
     repositories = attrsOf str;
     isBuildPythonPackage = platforms;
     schedulingPriority = int;
diff --git a/pkgs/stdenv/generic/make-derivation.nix b/pkgs/stdenv/generic/make-derivation.nix
index e021b284a122..e8f78d7401f1 100644
--- a/pkgs/stdenv/generic/make-derivation.nix
+++ b/pkgs/stdenv/generic/make-derivation.nix
@@ -238,9 +238,9 @@ rec {
           position = pos.file + ":" + toString pos.line;
         # Expose the result of the checks for everyone to see.
         } // {
-          evaluates = validity.valid
+          available = validity.valid
                    && (if config.checkMetaRecursively or false
-                       then lib.all (d: d.meta.evaluates or true) references
+                       then lib.all (d: d.meta.available or true) references
                        else true);
         };
 
diff --git a/pkgs/stdenv/generic/setup.sh b/pkgs/stdenv/generic/setup.sh
index e4a77af199b9..d7a4781448ae 100644
--- a/pkgs/stdenv/generic/setup.sh
+++ b/pkgs/stdenv/generic/setup.sh
@@ -866,7 +866,7 @@ unpackPhase() {
     # necessary when sources have been copied from other store
     # locations.
     if [ "${dontMakeSourcesWritable:-0}" != 1 ]; then
-        chmod -R u+w "$sourceRoot"
+        chmod -R u+w -- "$sourceRoot"
     fi
 
     runHook postUnpack
diff --git a/pkgs/stdenv/linux/bootstrap-files/aarch64-musl.nix b/pkgs/stdenv/linux/bootstrap-files/aarch64-musl.nix
new file mode 100644
index 000000000000..ff0eec893f2f
--- /dev/null
+++ b/pkgs/stdenv/linux/bootstrap-files/aarch64-musl.nix
@@ -0,0 +1,11 @@
+{
+  busybox = import <nix/fetchurl.nix> {
+    url = https://wdtz.org/files/wjzsj9cmdkc70f78yh072483x8656nci-stdenv-bootstrap-tools-aarch64-unknown-linux-musl/on-server/busybox;
+    sha256 = "01s6bwq84wyrjh3rdsgxni9gkzp7ss8rghg0cmp8zd87l79y8y4g";
+    executable = true;
+  };
+  bootstrapTools = import <nix/fetchurl.nix> {
+    url = https://wdtz.org/files/wjzsj9cmdkc70f78yh072483x8656nci-stdenv-bootstrap-tools-aarch64-unknown-linux-musl/on-server/bootstrap-tools.tar.xz;
+    sha256 = "0pbqrw9z4ifkijpfpx15l2dzi00rq8c5zg9ghimz5qgr5dx7f7cl";
+  };
+}
diff --git a/pkgs/stdenv/linux/bootstrap-files/armv6l-musl.nix b/pkgs/stdenv/linux/bootstrap-files/armv6l-musl.nix
new file mode 100644
index 000000000000..45ac0d5f9acd
--- /dev/null
+++ b/pkgs/stdenv/linux/bootstrap-files/armv6l-musl.nix
@@ -0,0 +1,11 @@
+{
+  busybox = import <nix/fetchurl.nix> {
+    url = https://wdtz.org/files/xmz441m69qrlfdw47l2k10zf87fsya6r-stdenv-bootstrap-tools-armv6l-unknown-linux-musleabihf/on-server/busybox;
+    sha256 = "01d0hp1xgrriiy9w0sd9vbqzwxnpwiyah80pi4vrpcmbwji36j1i";
+    executable = true;
+  };
+  bootstrapTools = import <nix/fetchurl.nix> {
+    url = https://wdtz.org/files/xmz441m69qrlfdw47l2k10zf87fsya6r-stdenv-bootstrap-tools-armv6l-unknown-linux-musleabihf/on-server/bootstrap-tools.tar.xz;
+    sha256 = "1r9mz9w8y5jd7gfwfsrvs20qarzxy7bvrp5dlm41hnx6z617if1h";
+  };
+}
diff --git a/pkgs/stdenv/linux/bootstrap-files/x86_64-musl.nix b/pkgs/stdenv/linux/bootstrap-files/x86_64-musl.nix
new file mode 100644
index 000000000000..12093f340008
--- /dev/null
+++ b/pkgs/stdenv/linux/bootstrap-files/x86_64-musl.nix
@@ -0,0 +1,11 @@
+{
+  busybox = import <nix/fetchurl.nix> {
+    url = https://wdtz.org/files/030q34q7fk6jdfxkgcqp5rzr4yhw3pgx-stdenv-bootstrap-tools-x86_64-unknown-linux-musl/on-server/busybox;
+    sha256 = "16lzrwwvdk6q3g08gs45pldz0rh6xpln2343xr444960h6wqxl5v";
+    executable = true;
+  };
+  bootstrapTools = import <nix/fetchurl.nix> {
+    url = https://wdtz.org/files/030q34q7fk6jdfxkgcqp5rzr4yhw3pgx-stdenv-bootstrap-tools-x86_64-unknown-linux-musl/on-server/bootstrap-tools.tar.xz;
+    sha256 = "0ly0wj8wzbikn2j8sn727vikk90bq36drh98qvfx1kkh5k5azm2j";
+  };
+}
diff --git a/pkgs/stdenv/linux/bootstrap-tools-musl/default.nix b/pkgs/stdenv/linux/bootstrap-tools-musl/default.nix
new file mode 100644
index 000000000000..6118585d545f
--- /dev/null
+++ b/pkgs/stdenv/linux/bootstrap-tools-musl/default.nix
@@ -0,0 +1,18 @@
+{ system, bootstrapFiles }:
+
+derivation {
+  name = "bootstrap-tools";
+
+  builder = bootstrapFiles.busybox;
+
+  args = [ "ash" "-e" ./scripts/unpack-bootstrap-tools.sh ];
+
+  tarball = bootstrapFiles.bootstrapTools;
+
+  inherit system;
+
+  # Needed by the GCC wrapper.
+  langC = true;
+  langCC = true;
+  isGNU = true;
+}
diff --git a/pkgs/stdenv/linux/bootstrap-tools-musl/scripts/unpack-bootstrap-tools.sh b/pkgs/stdenv/linux/bootstrap-tools-musl/scripts/unpack-bootstrap-tools.sh
new file mode 100644
index 000000000000..8b5070dc6d6f
--- /dev/null
+++ b/pkgs/stdenv/linux/bootstrap-tools-musl/scripts/unpack-bootstrap-tools.sh
@@ -0,0 +1,64 @@
+# Unpack the bootstrap tools tarball.
+echo Unpacking the bootstrap tools...
+$builder mkdir $out
+< $tarball $builder unxz | $builder tar x -C $out
+
+# Set the ELF interpreter / RPATH in the bootstrap binaries.
+echo Patching the bootstrap tools...
+
+if test -f $out/lib/ld.so.?; then
+   # MIPS case
+   LD_BINARY=$out/lib/ld.so.?
+else
+   # i686, x86_64 and armv5tel
+   LD_BINARY=$out/lib/ld-*so.?
+fi
+
+# On x86_64, ld-linux-x86-64.so.2 barfs on patchelf'ed programs.  So
+# use a copy of patchelf.
+LD_LIBRARY_PATH=$out/lib $LD_BINARY $out/bin/cp $out/bin/patchelf .
+
+for i in $out/bin/* $out/libexec/gcc/*/*/*; do
+    if [ -L "$i" ]; then continue; fi
+    if [ -z "${i##*/liblto*}" ]; then continue; fi
+    echo patching "$i"
+    LD_LIBRARY_PATH=$out/lib $LD_BINARY \
+        ./patchelf --set-interpreter $LD_BINARY --set-rpath $out/lib --force-rpath "$i"
+done
+
+for i in $out/lib/libiconv*.so $out/lib/libpcre* $out/lib/libc.so; do
+    if [ -L "$i" ]; then continue; fi
+    echo patching "$i"
+    $out/bin/patchelf --set-rpath $out/lib --force-rpath "$i"
+done
+
+export PATH=$out/bin
+
+# Fix the libc linker script.
+#cat $out/lib/libc.so | sed "s|/nix/store/e*-[^/]*/|$out/|g" > $out/lib/libc.so.tmp
+#mv $out/lib/libc.so.tmp $out/lib/libc.so
+#cat $out/lib/libpthread.so | sed "s|/nix/store/e*-[^/]*/|$out/|g" > $out/lib/libpthread.so.tmp
+#mv $out/lib/libpthread.so.tmp $out/lib/libpthread.so
+
+# Provide some additional symlinks.
+ln -s bash $out/bin/sh
+ln -s bzip2 $out/bin/bunzip2
+
+# Provide a gunzip script.
+cat > $out/bin/gunzip <<EOF
+#!$out/bin/sh
+exec $out/bin/gzip -d "\$@"
+EOF
+chmod +x $out/bin/gunzip
+
+# Provide fgrep/egrep.
+echo "#! $out/bin/sh" > $out/bin/egrep
+echo "exec $out/bin/grep -E \"\$@\"" >> $out/bin/egrep
+echo "#! $out/bin/sh" > $out/bin/fgrep
+echo "exec $out/bin/grep -F \"\$@\"" >> $out/bin/fgrep
+
+# Provide xz (actually only xz -d will work).
+echo "#! $out/bin/sh" > $out/bin/xz
+echo "exec $builder unxz \"\$@\"" >> $out/bin/xz
+
+chmod +x $out/bin/egrep $out/bin/fgrep $out/bin/xz
diff --git a/pkgs/stdenv/linux/default.nix b/pkgs/stdenv/linux/default.nix
index 858323e5cc56..703800deb2ad 100644
--- a/pkgs/stdenv/linux/default.nix
+++ b/pkgs/stdenv/linux/default.nix
@@ -6,16 +6,28 @@
 { lib
 , localSystem, crossSystem, config, overlays
 
-, bootstrapFiles ? { # switch
-    "i686-linux" = import ./bootstrap-files/i686.nix;
-    "x86_64-linux" = import ./bootstrap-files/x86_64.nix;
-    "armv5tel-linux" = import ./bootstrap-files/armv5tel.nix;
-    "armv6l-linux" = import ./bootstrap-files/armv6l.nix;
-    "armv7l-linux" = import ./bootstrap-files/armv7l.nix;
-    "aarch64-linux" = import ./bootstrap-files/aarch64.nix;
-    "mips64el-linux" = import ./bootstrap-files/loongson2f.nix;
-  }.${localSystem.system}
-    or (abort "unsupported platform for the pure Linux stdenv")
+, bootstrapFiles ?
+  let table = {
+    "glibc" = {
+      "i686-linux" = import ./bootstrap-files/i686.nix;
+      "x86_64-linux" = import ./bootstrap-files/x86_64.nix;
+      "armv5tel-linux" = import ./bootstrap-files/armv5tel.nix;
+      "armv6l-linux" = import ./bootstrap-files/armv6l.nix;
+      "armv7l-linux" = import ./bootstrap-files/armv7l.nix;
+      "aarch64-linux" = import ./bootstrap-files/aarch64.nix;
+      "mips64el-linux" = import ./bootstrap-files/loongson2f.nix;
+    };
+    "musl" = {
+      "aarch64-linux" = import ./bootstrap-files/aarch64-musl.nix;
+      "armv6l-linux"  = import ./bootstrap-files/armv6l-musl.nix;
+      "x86_64-linux"  = import ./bootstrap-files/x86_64-musl.nix;
+    };
+  };
+  archLookupTable = table.${localSystem.libc}
+    or (abort "unsupported libc for the pure Linux stdenv");
+  files = archLookupTable.${localSystem.system}
+    or (abort "unsupported platform for the pure Linux stdenv");
+  in files
 }:
 
 assert crossSystem == null;
@@ -40,7 +52,9 @@ let
 
 
   # Download and unpack the bootstrap tools (coreutils, GCC, Glibc, ...).
-  bootstrapTools = import ./bootstrap-tools { inherit system bootstrapFiles; };
+  bootstrapTools = import (if localSystem.libc == "musl" then ./bootstrap-tools-musl else ./bootstrap-tools) { inherit system bootstrapFiles; };
+
+  getLibc = stage: stage.${localSystem.libc};
 
 
   # This function builds the various standard environments used during
@@ -82,7 +96,7 @@ let
           cc = prevStage.gcc-unwrapped;
           bintools = prevStage.binutils;
           isGNU = true;
-          libc = prevStage.glibc;
+          libc = getLibc prevStage;
           inherit (prevStage) coreutils gnugrep;
           name = name;
           stdenvNoCC = prevStage.ccWrapperStdenv;
@@ -95,6 +109,7 @@ let
 
           # stdenv.glibc is used by GCC build to figure out the system-level
           # /usr/include directory.
+          # TODO: Remove this!
           inherit (prevStage) glibc;
         };
         overrides = self: super: (overrides self super) // { fetchurl = thisStdenv.fetchurlBoot; };
@@ -113,7 +128,8 @@ in
     __raw = true;
 
     gcc-unwrapped = null;
-    glibc = null;
+    glibc = assert false; null;
+    musl = assert false; null;
     binutils = null;
     coreutils = null;
     gnugrep = null;
@@ -135,12 +151,15 @@ in
       # will search the Glibc headers before the GCC headers).  So
       # create a dummy Glibc here, which will be used in the stdenv of
       # stage1.
-      glibc = self.stdenv.mkDerivation {
-        name = "bootstrap-glibc";
+      ${localSystem.libc} = self.stdenv.mkDerivation {
+        name = "bootstrap-${localSystem.libc}";
         buildCommand = ''
           mkdir -p $out
           ln -s ${bootstrapTools}/lib $out/lib
+        '' + lib.optionalString (localSystem.libc == "glibc") ''
           ln -s ${bootstrapTools}/include-glibc $out/include
+        '' + lib.optionalString (localSystem.libc == "musl") ''
+          ln -s ${bootstrapTools}/include-libc $out/include
         '';
       };
       gcc-unwrapped = bootstrapTools;
@@ -148,7 +167,7 @@ in
         nativeTools = false;
         nativeLibc = false;
         buildPackages = { };
-        libc = self.glibc;
+        libc = getLibc self;
         inherit (self) stdenvNoCC coreutils gnugrep;
         bintools = bootstrapTools;
         name = "bootstrap-binutils-wrapper";
@@ -177,7 +196,9 @@ in
       binutils = super.binutils_nogold;
       inherit (prevStage)
         ccWrapperStdenv
-        glibc gcc-unwrapped coreutils gnugrep;
+        gcc-unwrapped coreutils gnugrep;
+
+      ${localSystem.libc} = getLibc prevStage;
 
       # A threaded perl build needs glibc/libpthread_nonshared.a,
       # which is not included in bootstrapTools, so disable threading.
@@ -203,7 +224,7 @@ in
       binutils = prevStage.binutils.override {
         # Rewrap the binutils with the new glibc, so both the next
         # stage's wrappers use it.
-        libc = self.glibc;
+        libc = getLibc self;
       };
     };
   })
@@ -218,17 +239,18 @@ in
     overrides = self: super: rec {
       inherit (prevStage)
         ccWrapperStdenv
-        binutils glibc coreutils gnugrep
+        binutils coreutils gnugrep
         perl patchelf linuxHeaders gnum4 bison;
+      ${localSystem.libc} = getLibc prevStage;
       # Link GCC statically against GMP etc.  This makes sense because
       # these builds of the libraries are only used by GCC, so it
       # reduces the size of the stdenv closure.
       gmp = super.gmp.override { stdenv = self.makeStaticLibraries self.stdenv; };
       mpfr = super.mpfr.override { stdenv = self.makeStaticLibraries self.stdenv; };
       libmpc = super.libmpc.override { stdenv = self.makeStaticLibraries self.stdenv; };
-      isl_0_14 = super.isl_0_14.override { stdenv = self.makeStaticLibraries self.stdenv; };
+      isl_0_17 = super.isl_0_17.override { stdenv = self.makeStaticLibraries self.stdenv; };
       gcc-unwrapped = super.gcc-unwrapped.override {
-        isl = isl_0_14;
+        isl = isl_0_17;
       };
     };
     extraNativeBuildInputs = [ prevStage.patchelf prevStage.paxctl ] ++
@@ -247,8 +269,8 @@ in
       # because gcc (since JAR support) already depends on zlib, and
       # then if we already have a zlib we want to use that for the
       # other purposes (binutils and top-level pkgs) too.
-      inherit (prevStage) gettext gnum4 bison gmp perl glibc zlib linuxHeaders;
-
+      inherit (prevStage) gettext gnum4 bison gmp perl zlib linuxHeaders;
+      ${localSystem.libc} = getLibc prevStage;
       binutils = super.binutils.override {
         # Don't use stdenv's shell but our own
         shell = self.bash + "/bin/bash";
@@ -267,7 +289,7 @@ in
         };
         cc = prevStage.gcc-unwrapped;
         bintools = self.binutils;
-        libc = self.glibc;
+        libc = getLibc self;
         inherit (self) stdenvNoCC coreutils gnugrep;
         name = "";
         shell = self.bash + "/bin/bash";
@@ -314,7 +336,9 @@ in
       inherit (prevStage.stdenv) fetchurlBoot;
 
       extraAttrs = {
+        # TODO: remove this!
         inherit (prevStage) glibc;
+
         inherit platform bootstrapTools;
         shellPackage = prevStage.bash;
       };
@@ -332,18 +356,20 @@ in
             ++ lib.optional (gawk.libsigsegv != null) gawk.libsigsegv
           )
         # More complicated cases
-        ++ [
-            glibc.out glibc.dev glibc.bin/*propagated from .dev*/ linuxHeaders
+        ++ (map (x: getOutput x (getLibc prevStage)) [ "out" "dev" "bin" ] )
+        ++  [ /*propagated from .dev*/ linuxHeaders
             binutils gcc gcc.cc gcc.cc.lib gcc.expand-response-params
           ]
+          ++ lib.optional (localSystem.libc == "musl") libiconv
           ++ lib.optionals localSystem.isAarch64
             [ prevStage.updateAutotoolsGnuConfigScriptsHook prevStage.gnu-config ];
 
       overrides = self: super: {
         inherit (prevStage)
           gzip bzip2 xz bash coreutils diffutils findutils gawk
-          glibc gnumake gnused gnutar gnugrep gnupatch patchelf
+          gnumake gnused gnutar gnugrep gnupatch patchelf
           attr acl paxctl zlib pcre;
+        ${localSystem.libc} = getLibc prevStage;
       } // lib.optionalAttrs (super.targetPlatform == localSystem) {
         # Need to get rid of these when cross-compiling.
         inherit (prevStage) binutils binutils-raw;
diff --git a/pkgs/stdenv/linux/make-bootstrap-tools-cross.nix b/pkgs/stdenv/linux/make-bootstrap-tools-cross.nix
index ac1d57a22752..6c217be4ea3c 100644
--- a/pkgs/stdenv/linux/make-bootstrap-tools-cross.nix
+++ b/pkgs/stdenv/linux/make-bootstrap-tools-cross.nix
@@ -7,10 +7,15 @@ let
   };
 
 in with (import ../../../lib).systems.examples; {
-  armv5tel  = make sheevaplug;
-  scaleway  = make scaleway-c1;
-  pogoplug4 = make pogoplug4;
-  armv6l    = make raspberryPi;
-  armv7l    = make armv7l-hf-multiplatform;
-  aarch64   = make aarch64-multiplatform;
+  armv5tel   = make sheevaplug;
+  scaleway   = make scaleway-c1;
+  pogoplug4  = make pogoplug4;
+  armv6l     = make raspberryPi;
+  armv7l     = make armv7l-hf-multiplatform;
+  aarch64    = make aarch64-multiplatform;
+  x86_64-musl  = make musl64;
+  i686-musl    = make musl32;
+  armv6l-musl  = make muslpi;
+  aarch64-musl = make aarch64-multiplatform-musl;
+  riscv64 = make riscv64;
 }
diff --git a/pkgs/stdenv/linux/make-bootstrap-tools.nix b/pkgs/stdenv/linux/make-bootstrap-tools.nix
index f51a39d5820d..8033d47d5db5 100644
--- a/pkgs/stdenv/linux/make-bootstrap-tools.nix
+++ b/pkgs/stdenv/linux/make-bootstrap-tools.nix
@@ -4,9 +4,7 @@
 
 let
   pkgs = import ../../.. { inherit localSystem crossSystem; };
-  glibc = if pkgs.hostPlatform != pkgs.buildPlatform
-          then pkgs.glibcCross
-          else pkgs.glibc;
+  libc = pkgs.stdenv.cc.libc;
 in with pkgs; rec {
 
 
@@ -21,7 +19,7 @@ in with pkgs; rec {
   tarMinimal = gnutar.override { acl = null; };
 
   busyboxMinimal = busybox.override {
-    useMusl = true;
+    useMusl = !targetPlatform.isRiscV;
     enableStatic = true;
     enableMinimal = true;
     extraConfig = ''
@@ -46,29 +44,30 @@ in with pkgs; rec {
         set -x
         mkdir -p $out/bin $out/lib $out/libexec
 
+      '' + (if (hostPlatform.libc == "glibc") then ''
         # Copy what we need of Glibc.
-        cp -d ${glibc.out}/lib/ld*.so* $out/lib
-        cp -d ${glibc.out}/lib/libc*.so* $out/lib
-        cp -d ${glibc.out}/lib/libc_nonshared.a $out/lib
-        cp -d ${glibc.out}/lib/libm*.so* $out/lib
-        cp -d ${glibc.out}/lib/libdl*.so* $out/lib
-        cp -d ${glibc.out}/lib/librt*.so*  $out/lib
-        cp -d ${glibc.out}/lib/libpthread*.so* $out/lib
-        cp -d ${glibc.out}/lib/libnsl*.so* $out/lib
-        cp -d ${glibc.out}/lib/libutil*.so* $out/lib
-        cp -d ${glibc.out}/lib/libnss*.so* $out/lib
-        cp -d ${glibc.out}/lib/libresolv*.so* $out/lib
-        cp -d ${glibc.out}/lib/crt?.o $out/lib
-
-        cp -rL ${glibc.dev}/include $out
+        cp -d ${libc.out}/lib/ld*.so* $out/lib
+        cp -d ${libc.out}/lib/libc*.so* $out/lib
+        cp -d ${libc.out}/lib/libc_nonshared.a $out/lib
+        cp -d ${libc.out}/lib/libm*.so* $out/lib
+        cp -d ${libc.out}/lib/libdl*.so* $out/lib
+        cp -d ${libc.out}/lib/librt*.so*  $out/lib
+        cp -d ${libc.out}/lib/libpthread*.so* $out/lib
+        cp -d ${libc.out}/lib/libnsl*.so* $out/lib
+        cp -d ${libc.out}/lib/libutil*.so* $out/lib
+        cp -d ${libc.out}/lib/libnss*.so* $out/lib
+        cp -d ${libc.out}/lib/libresolv*.so* $out/lib
+        cp -d ${libc.out}/lib/crt?.o $out/lib
+
+        cp -rL ${libc.dev}/include $out
         chmod -R u+w "$out"
 
-        # glibc can contain linker scripts: find them, copy their deps,
+        # libc can contain linker scripts: find them, copy their deps,
         # and get rid of absolute paths (nuke-refs would make them useless)
         local lScripts=$(grep --files-with-matches --max-count=1 'GNU ld script' -R "$out/lib")
-        cp -d -t "$out/lib/" $(cat $lScripts | tr " " "\n" | grep -F '${glibc.out}' | sort -u)
+        cp -d -t "$out/lib/" $(cat $lScripts | tr " " "\n" | grep -F '${libc.out}' | sort -u)
         for f in $lScripts; do
-          substituteInPlace "$f" --replace '${glibc.out}/lib/' ""
+          substituteInPlace "$f" --replace '${libc.out}/lib/' ""
         done
 
         # Hopefully we won't need these.
@@ -76,7 +75,18 @@ in with pkgs; rec {
         find $out/include -name .install -exec rm {} \;
         find $out/include -name ..install.cmd -exec rm {} \;
         mv $out/include $out/include-glibc
+    '' else if (hostPlatform.libc == "musl") then ''
+        # Copy what we need from musl
+        cp ${libc.out}/lib/* $out/lib
+        cp -rL ${libc.dev}/include $out
+        chmod -R u+w "$out"
 
+        rm -rf $out/include/mtd $out/include/rdma $out/include/sound $out/include/video
+        find $out/include -name .install -exec rm {} \;
+        find $out/include -name ..install.cmd -exec rm {} \;
+        mv $out/include $out/include-libc
+    '' else throw "unsupported libc for bootstrap tools")
+    + ''
         # Copy coreutils, bash, etc.
         cp ${coreutilsMinimal.out}/bin/* $out/bin
         (cd $out/bin && rm vdir dir sha*sum pinky factor pathchk runcon shuf who whoami shred users)
@@ -115,7 +125,7 @@ in with pkgs; rec {
         cp -rd ${gcc.cc.out}/libexec/* $out/libexec
         chmod -R u+w $out/libexec
         rm -rf $out/libexec/gcc/*/*/plugin
-        mkdir $out/include
+        mkdir -p $out/include
         cp -rd ${gcc.cc.out}/include/c++ $out/include
         chmod -R u+w $out/include
         rm -rf $out/include/c++/*/ext/pb_ds
@@ -126,12 +136,14 @@ in with pkgs; rec {
         cp -d ${libmpc.out}/lib/libmpc*.so* $out/lib
         cp -d ${zlib.out}/lib/libz.so* $out/lib
         cp -d ${libelf}/lib/libelf.so* $out/lib
+      '' + lib.optionalString (hostPlatform.libc == "musl") ''
+        cp -d ${libiconv.out}/lib/libiconv*.so* $out/lib
 
       '' + lib.optionalString (hostPlatform != buildPlatform) ''
         # These needed for cross but not native tools because the stdenv
         # GCC has certain things built in statically. See
         # pkgs/stdenv/linux/default.nix for the details.
-        cp -d ${isl_0_14.out}/lib/libisl*.so* $out/lib
+        cp -d ${isl_0_17.out}/lib/libisl*.so* $out/lib
 
       '' + ''
         cp -d ${bzip2.out}/lib/libbz2.so* $out/lib
@@ -161,7 +173,7 @@ in with pkgs; rec {
         mv $out/.pack $out/pack
 
         mkdir $out/on-server
-        tar cvfJ $out/on-server/bootstrap-tools.tar.xz --hard-dereference --sort=name --numeric-owner --owner=0 --group=0 --mtime=@1 -C $out/pack .
+        XZ_OPT=-9 tar cvJf $out/on-server/bootstrap-tools.tar.xz --hard-dereference --sort=name --numeric-owner --owner=0 --group=0 --mtime=@1 -C $out/pack .
         cp ${busyboxMinimal}/bin/busybox $out/on-server
         chmod u+w $out/on-server/busybox
         nuke-refs $out/on-server/busybox
@@ -189,10 +201,17 @@ in with pkgs; rec {
     bootstrapTools = runCommand "bootstrap-tools.tar.xz" {} "cp ${build}/on-server/bootstrap-tools.tar.xz $out";
   };
 
-  bootstrapTools = import ./bootstrap-tools {
-    inherit (hostPlatform) system;
-    inherit bootstrapFiles;
-  };
+  bootstrapTools = if (hostPlatform.libc == "glibc") then
+    import ./bootstrap-tools {
+      inherit (hostPlatform) system;
+      inherit bootstrapFiles;
+    }
+    else if (hostPlatform.libc == "musl") then
+    import ./bootstrap-tools-musl {
+      inherit (hostPlatform) system;
+      inherit bootstrapFiles;
+    }
+    else throw "unsupported libc";
 
   test = derivation {
     name = "test-bootstrap-tools";
@@ -215,10 +234,17 @@ in with pkgs; rec {
       grep --version
       gcc --version
 
+    '' + lib.optionalString (hostPlatform.libc == "glibc") ''
       ldlinux=$(echo ${bootstrapTools}/lib/ld-linux*.so.?)
       export CPP="cpp -idirafter ${bootstrapTools}/include-glibc -B${bootstrapTools}"
       export CC="gcc -idirafter ${bootstrapTools}/include-glibc -B${bootstrapTools} -Wl,-dynamic-linker,$ldlinux -Wl,-rpath,${bootstrapTools}/lib"
       export CXX="g++ -idirafter ${bootstrapTools}/include-glibc -B${bootstrapTools} -Wl,-dynamic-linker,$ldlinux -Wl,-rpath,${bootstrapTools}/lib"
+    '' + lib.optionalString (hostPlatform.libc == "musl") ''
+      ldmusl=$(echo ${bootstrapTools}/lib/ld-musl*.so.?)
+      export CPP="cpp -idirafter ${bootstrapTools}/include-libc -B${bootstrapTools}"
+      export CC="gcc -idirafter ${bootstrapTools}/include-libc -B${bootstrapTools} -Wl,-dynamic-linker,$ldmusl -Wl,-rpath,${bootstrapTools}/lib"
+      export CXX="g++ -idirafter ${bootstrapTools}/include-libc -B${bootstrapTools} -Wl,-dynamic-linker,$ldmusl -Wl,-rpath,${bootstrapTools}/lib"
+    '' + ''
 
       echo '#include <stdio.h>' >> foo.c
       echo '#include <limits.h>' >> foo.c
diff --git a/pkgs/stdenv/native/default.nix b/pkgs/stdenv/native/default.nix
index 558a77281edb..19efac3700a6 100644
--- a/pkgs/stdenv/native/default.nix
+++ b/pkgs/stdenv/native/default.nix
@@ -131,7 +131,7 @@ in
     };
 
     fetchurl = import ../../build-support/fetchurl {
-      inherit stdenv;
+      inherit lib stdenvNoCC;
       # Curl should be in /usr/bin or so.
       curl = null;
     };
diff --git a/pkgs/tools/X11/xdg-utils/default.nix b/pkgs/tools/X11/xdg-utils/default.nix
index f71bcdef9f4f..52ecdc267340 100644
--- a/pkgs/tools/X11/xdg-utils/default.nix
+++ b/pkgs/tools/X11/xdg-utils/default.nix
@@ -53,7 +53,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = with stdenv.lib; {
-    homepage = https://portland.freedesktop.org/wiki/;
+    homepage = https://www.freedesktop.org/wiki/Software/xdg-utils/;
     description = "A set of command line tools that assist applications with a variety of desktop integration tasks";
     license = if mimiSupport then licenses.gpl2 else licenses.free;
     maintainers = [ maintainers.eelco ];
diff --git a/pkgs/tools/admin/awscli/default.nix b/pkgs/tools/admin/awscli/default.nix
index bad9ccae799d..4c6a91ec321b 100644
--- a/pkgs/tools/admin/awscli/default.nix
+++ b/pkgs/tools/admin/awscli/default.nix
@@ -26,12 +26,12 @@ let
 
 in buildPythonPackage rec {
   pname = "awscli";
-  version = "1.14.29";
+  version = "1.14.41";
   namePrefix = "";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "96edb1dd72fbc13638967fe07c436e95133169759cc962b973bb79ba959bc652";
+    sha256 = "8cf2a52d56f26e22e2fbd7b72649ef1d3de8930df7a730d7f27418d129bb3a6a";
   };
 
   # No tests included
diff --git a/pkgs/tools/admin/docker-credential-gcr/default.nix b/pkgs/tools/admin/docker-credential-gcr/default.nix
new file mode 100644
index 000000000000..52b68a7477cc
--- /dev/null
+++ b/pkgs/tools/admin/docker-credential-gcr/default.nix
@@ -0,0 +1,28 @@
+{ stdenv, buildGoPackage, fetchFromGitHub }:
+
+buildGoPackage rec {
+  name = "docker-credential-gcr-${version}";
+  version = "1.4.3";
+
+  goPackagePath = "github.com/GoogleCloudPlatform/docker-credential-gcr";
+
+  src = fetchFromGitHub {
+    owner = "GoogleCloudPlatform";
+    repo = "docker-credential-gcr";
+    rev = "v${version}";
+    sha256 = "1xb88xjyyrdmjcgfv7fqdkv1ip3dpzsdif5vm7vkqvn83s5wj5df";
+  };
+
+  meta = with stdenv.lib; {
+    description = "A Docker credential helper for GCR (https://gcr.io) users";
+    longDescription = ''
+      docker-credential-gcr is Google Container Registry's Docker credential
+      helper. It allows for Docker clients v1.11+ to easily make
+      authenticated requests to GCR's repositories (gcr.io, eu.gcr.io, etc.).
+    '';
+    homepage = https://github.com/GoogleCloudPlatform/docker-credential-gcr;
+    license = licenses.asl20;
+    maintainers = with maintainers; [ suvash ];
+    platforms = platforms.linux;
+  };
+}
diff --git a/pkgs/tools/admin/fastlane/Gemfile.lock b/pkgs/tools/admin/fastlane/Gemfile.lock
index 5dddccfe78ac..a578bb4bca27 100644
--- a/pkgs/tools/admin/fastlane/Gemfile.lock
+++ b/pkgs/tools/admin/fastlane/Gemfile.lock
@@ -4,6 +4,7 @@ GEM
     CFPropertyList (2.3.6)
     addressable (2.5.2)
       public_suffix (>= 2.0.2, < 4.0)
+    atomos (0.1.2)
     babosa (1.0.2)
     claide (1.0.2)
     colored (1.2)
@@ -16,7 +17,7 @@ GEM
       unf (>= 0.0.5, < 1.0.0)
     dotenv (2.2.1)
     excon (0.60.0)
-    faraday (0.13.1)
+    faraday (0.14.0)
       multipart-post (>= 1.2, < 3)
     faraday-cookie_jar (0.0.6)
       faraday (>= 0.7.4)
@@ -24,8 +25,8 @@ GEM
     faraday_middleware (0.12.2)
       faraday (>= 0.7.4, < 1.0)
     fastimage (2.1.1)
-    fastlane (2.75.1)
-      CFPropertyList (>= 2.3, < 3.0.0)
+    fastlane (2.80.0)
+      CFPropertyList (>= 2.3, < 4.0.0)
       addressable (>= 2.3, < 3.0.0)
       babosa (>= 1.0.2, < 2.0.0)
       bundler (>= 1.12.0, < 2.0.0)
@@ -49,16 +50,16 @@ GEM
       public_suffix (~> 2.0.0)
       rubyzip (>= 1.1.0, < 2.0.0)
       security (= 0.1.3)
-      slack-notifier (>= 1.3, < 2.0.0)
+      slack-notifier (>= 2.0.0, < 3.0.0)
       terminal-notifier (>= 1.6.2, < 2.0.0)
       terminal-table (>= 1.4.5, < 2.0.0)
       tty-screen (>= 0.6.3, < 1.0.0)
-      tty-spinner (>= 0.7.0, < 1.0.0)
+      tty-spinner (>= 0.8.0, < 1.0.0)
       word_wrap (~> 1.0.0)
       xcodeproj (>= 1.5.2, < 2.0.0)
       xcpretty (>= 0.2.4, < 1.0.0)
       xcpretty-travis-formatter (>= 0.0.3)
-    gh_inspector (1.0.3)
+    gh_inspector (1.1.1)
     google-api-client (0.13.6)
       addressable (~> 2.5, >= 2.5.1)
       googleauth (~> 0.5)
@@ -89,7 +90,7 @@ GEM
       mime-types-data (~> 3.2015)
     mime-types-data (3.2016.0521)
     mini_magick (4.5.1)
-    multi_json (1.13.0)
+    multi_json (1.13.1)
     multi_xml (0.6.0)
     multipart-post (2.0.0)
     nanaimo (0.2.3)
@@ -109,13 +110,13 @@ GEM
       faraday (~> 0.9)
       jwt (>= 1.5, < 3.0)
       multi_json (~> 1.10)
-    slack-notifier (1.5.1)
+    slack-notifier (2.3.2)
     terminal-notifier (1.8.0)
     terminal-table (1.8.0)
       unicode-display_width (~> 1.1, >= 1.1.1)
     tty-cursor (0.5.0)
     tty-screen (0.6.4)
-    tty-spinner (0.7.0)
+    tty-spinner (0.8.0)
       tty-cursor (>= 0.5.0)
     uber (0.1.0)
     unf (0.1.4)
@@ -123,8 +124,9 @@ GEM
     unf_ext (0.0.7.4)
     unicode-display_width (1.3.0)
     word_wrap (1.0.0)
-    xcodeproj (1.5.4)
+    xcodeproj (1.5.6)
       CFPropertyList (~> 2.3.3)
+      atomos (~> 0.1.2)
       claide (>= 1.0.2, < 2.0)
       colored2 (~> 3.1)
       nanaimo (~> 0.2.3)
diff --git a/pkgs/tools/admin/fastlane/gemset.nix b/pkgs/tools/admin/fastlane/gemset.nix
index a309de07a11e..c9ddb7b77c04 100644
--- a/pkgs/tools/admin/fastlane/gemset.nix
+++ b/pkgs/tools/admin/fastlane/gemset.nix
@@ -8,6 +8,14 @@
     };
     version = "2.5.2";
   };
+  atomos = {
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "10z69hjv30r2w5q5wmlf0cq4jv3w744jrac8ylln8sf45ckqj7wk";
+      type = "gem";
+    };
+    version = "0.1.2";
+  };
   babosa = {
     source = {
       remotes = ["https://rubygems.org"];
@@ -102,10 +110,10 @@
     dependencies = ["multipart-post"];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1gyqsj7vlqynwvivf9485zwmcj04v1z7gq362z0b8zw2zf4ag0hw";
+      sha256 = "1c3x3s8vb5nf7inyfvhdxwa4q3swmnacpxby6pish5fgmhws7zrr";
       type = "gem";
     };
-    version = "0.13.1";
+    version = "0.14.0";
   };
   faraday-cookie_jar = {
     dependencies = ["faraday" "http-cookie"];
@@ -137,18 +145,18 @@
     dependencies = ["CFPropertyList" "addressable" "babosa" "colored" "commander-fastlane" "dotenv" "excon" "faraday" "faraday-cookie_jar" "faraday_middleware" "fastimage" "gh_inspector" "google-api-client" "highline" "json" "mini_magick" "multi_json" "multi_xml" "multipart-post" "plist" "public_suffix" "rubyzip" "security" "slack-notifier" "terminal-notifier" "terminal-table" "tty-screen" "tty-spinner" "word_wrap" "xcodeproj" "xcpretty" "xcpretty-travis-formatter"];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0v5i9wnbmsmvz3xhbkvs1w5qj9b0ib5431i3zlimfasf8h138l9y";
+      sha256 = "0saas50qdfipkms66snyg7imvzn1vfngd87dfygj9x8v18bqwvis";
       type = "gem";
     };
-    version = "2.75.1";
+    version = "2.80.0";
   };
   gh_inspector = {
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1lxvp8xpjd2cazzcp90phy567spp4v41bnk9awgx8absndv70k1x";
+      sha256 = "0mpfl279k8yff2ia601b37zw31blwh2plkr501iz6qj8drx3mq3c";
       type = "gem";
     };
-    version = "1.0.3";
+    version = "1.1.1";
   };
   google-api-client = {
     dependencies = ["addressable" "googleauth" "httpclient" "mime-types" "representable" "retriable"];
@@ -262,10 +270,10 @@
   multi_json = {
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "05rrhxl08qvd37g5q13v6k8qqbr1ixn6g53ld6rxrvj4lxrjvxns";
+      sha256 = "1rl0qy4inf1mp8mybfk56dfga0mvx97zwpmq5xmiwl5r770171nv";
       type = "gem";
     };
-    version = "1.13.0";
+    version = "1.13.1";
   };
   multi_xml = {
     source = {
@@ -368,10 +376,10 @@
   slack-notifier = {
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0xavibxh00gy62mm79l6id9l2fldjmdqifk8alqfqy5z38ffwah6";
+      sha256 = "1pkfn99dhy5s526r6k8d87fwwb6j287ga9s7lxqmh60z28xqh3bv";
       type = "gem";
     };
-    version = "1.5.1";
+    version = "2.3.2";
   };
   terminal-notifier = {
     source = {
@@ -410,10 +418,10 @@
     dependencies = ["tty-cursor"];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0sblbhnscgchnxpbsxa5xmnxnpw13nd4lgsykazm9mhsxmjmhggw";
+      sha256 = "1xv5bycgmiyx00bq0kx2bdixi3h1ffi86mwj858gqbxlpjbzsi94";
       type = "gem";
     };
-    version = "0.7.0";
+    version = "0.8.0";
   };
   uber = {
     source = {
@@ -457,13 +465,13 @@
     version = "1.0.0";
   };
   xcodeproj = {
-    dependencies = ["CFPropertyList" "claide" "colored2" "nanaimo"];
+    dependencies = ["CFPropertyList" "atomos" "claide" "colored2" "nanaimo"];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "04kv04y5yz2zniwwywh5ik29gpnjpsp23yr6w07qn3m243icvi76";
+      sha256 = "0zqx24qhax7p91rs1114da0v86cy9m7an1bjwxq6dyccp8g6kb50";
       type = "gem";
     };
-    version = "1.5.4";
+    version = "1.5.6";
   };
   xcpretty = {
     dependencies = ["rouge"];
diff --git a/pkgs/tools/admin/lego/default.nix b/pkgs/tools/admin/lego/default.nix
new file mode 100644
index 000000000000..fe165b1e66e3
--- /dev/null
+++ b/pkgs/tools/admin/lego/default.nix
@@ -0,0 +1,24 @@
+{ lib, fetchFromGitHub, buildGoPackage }:
+
+buildGoPackage rec {
+  name = "lego-unstable-${version}";
+  version = "2018-02-02";
+  rev = "06a8e7c475c03ef8d4773284ac63357d2810601b";
+
+  src = fetchFromGitHub {
+    inherit rev;
+    owner = "xenolf";
+    repo = "lego";
+    sha256 = "11a9gcgi3317z4lb1apkf6dnbjhf7xni0670nric3fbf5diqfwh2";
+  };
+
+  goPackagePath = "github.com/xenolf/lego";
+  goDeps = ./deps.nix;
+
+  meta = with lib; {
+    description = "Let's Encrypt client and ACME library written in Go";
+    license = licenses.mit;
+    homepage = https://github.com/xenolf/lego;
+    maintainers = with maintainers; [ andrew-d ];
+  };
+}
diff --git a/pkgs/tools/admin/lego/deps.nix b/pkgs/tools/admin/lego/deps.nix
new file mode 100644
index 000000000000..6d842c5f3f51
--- /dev/null
+++ b/pkgs/tools/admin/lego/deps.nix
@@ -0,0 +1,219 @@
+# This file was generated by https://github.com/kamilchm/go2nix v1.2.1
+[
+  {
+    goPackagePath = "cloud.google.com/go";
+    fetch = {
+      type = "git";
+      url = "https://code.googlesource.com/gocloud";
+      rev = "fd7767e8876b52efa597af4d0ec944e9b2574120";
+      sha256 = "1m7yd2vwbgypi9izgyif4k8rifgfmgsh747s1z467qlr5k17cjy5";
+    };
+  }
+  {
+    goPackagePath = "github.com/Azure/azure-sdk-for-go";
+    fetch = {
+      type = "git";
+      url = "https://github.com/Azure/azure-sdk-for-go";
+      rev = "f111fc2fa3861c5fdced76cae4c9c71821969577";
+      sha256 = "1xfm3phjwb222nkhzi16qslj0r374rgvjw99c9wrzzlzkq2qkb38";
+    };
+  }
+  {
+    goPackagePath = "github.com/Azure/go-autorest";
+    fetch = {
+      type = "git";
+      url = "https://github.com/Azure/go-autorest";
+      rev = "5a06e9ddbe3c22262059b8e061777b9934f982bd";
+      sha256 = "0dy80x5gxsq6vf8lpihpgv8cb8mnsk76q4ywxx3cxzfglqdjlwz6";
+    };
+  }
+  {
+    goPackagePath = "github.com/JamesClonk/vultr";
+    fetch = {
+      type = "git";
+      url = "https://github.com/JamesClonk/vultr";
+      rev = "fa1c0367800db75e4d10d0ec90c49a8731670224";
+      sha256 = "1bx2x17aa6wfn4qy9lxk8sh7shs3x5ppz2z49s0xm8qq0rs1qi92";
+    };
+  }
+  {
+    goPackagePath = "github.com/aws/aws-sdk-go";
+    fetch = {
+      type = "git";
+      url = "https://github.com/aws/aws-sdk-go";
+      rev = "fb9d53b0db7e801eb0d4fa021f5860794d845da3";
+      sha256 = "0md4bvrr4y5604l3bif7xx1bvhn6cc81v578s6w15mp63k9yjlpn";
+    };
+  }
+  {
+    goPackagePath = "github.com/decker502/dnspod-go";
+    fetch = {
+      type = "git";
+      url = "https://github.com/decker502/dnspod-go";
+      rev = "f33a2c6040fc2550a631de7b3a53bddccdcd73fb";
+      sha256 = "0c5v7y465k8mi5vxhln53pjn3z4h022sh14mngnx71h6szakzykg";
+    };
+  }
+  {
+    goPackagePath = "github.com/dgrijalva/jwt-go";
+    fetch = {
+      type = "git";
+      url = "https://github.com/dgrijalva/jwt-go";
+      rev = "dbeaa9332f19a944acb5736b4456cfcc02140e29";
+      sha256 = "0zk6l6kzsjdijfn7c4h0aywdjx5j2hjwi67vy1k6wr46hc8ks2hs";
+    };
+  }
+  {
+    goPackagePath = "github.com/dnsimple/dnsimple-go";
+    fetch = {
+      type = "git";
+      url = "https://github.com/dnsimple/dnsimple-go";
+      rev = "e43ab24dc4818cd584429752f69885fbc8a74baa";
+      sha256 = "0cq1xjv27nssarmflnh0w4i0l8v74129va4inhi5m2wxrz2247z7";
+    };
+  }
+  {
+    goPackagePath = "github.com/edeckers/auroradnsclient";
+    fetch = {
+      type = "git";
+      url = "https://github.com/edeckers/auroradnsclient";
+      rev = "1563e622aaca0a8bb895a448f31d4a430ab97586";
+      sha256 = "0d1izyqnlqasp56mldrpfnyhzmih2k955jn78ibzhay22dmn8ndr";
+    };
+  }
+  {
+    goPackagePath = "github.com/exoscale/egoscale";
+    fetch = {
+      type = "git";
+      url = "https://github.com/exoscale/egoscale";
+      rev = "7c8b1e7975be2af74d6e462dbea467e9061f9619";
+      sha256 = "00bqam37lkwls4rr209pcrld1rb025nm935h004lgfd8i2xjv5g4";
+    };
+  }
+  {
+    goPackagePath = "github.com/google/go-querystring";
+    fetch = {
+      type = "git";
+      url = "https://github.com/google/go-querystring";
+      rev = "53e6ce116135b80d037921a7fdd5138cf32d7a8a";
+      sha256 = "0lkbm067nhmxk66pyjx59d77dbjjzwyi43gdvzyx2f8m1942rq7f";
+    };
+  }
+  {
+    goPackagePath = "github.com/miekg/dns";
+    fetch = {
+      type = "git";
+      url = "https://github.com/miekg/dns";
+      rev = "5364553f1ee9cddc7ac8b62dce148309c386695b";
+      sha256 = "1r56ws5ayza5xk6xlkjvv7wcj6misbm5cyixvyf3pnz8wgja31wp";
+    };
+  }
+  {
+    goPackagePath = "github.com/ovh/go-ovh";
+    fetch = {
+      type = "git";
+      url = "https://github.com/ovh/go-ovh";
+      rev = "df6beeb652924ef66aa95690b392f62864ad8842";
+      sha256 = "1nxgsrbqhznqivjxh67pn8laf4pysja5xyc40bdjvprl9nc40z6q";
+    };
+  }
+  {
+    goPackagePath = "github.com/rainycape/memcache";
+    fetch = {
+      type = "git";
+      url = "https://github.com/rainycape/memcache";
+      rev = "1031fa0ce2f20c1c0e1e1b51951d8ea02c84fa05";
+      sha256 = "02cbhy192vi0d1kwh57mdrg1mkr027ndkvd1y0cx0kn0h6pszggn";
+    };
+  }
+  {
+    goPackagePath = "github.com/stretchr/testify";
+    fetch = {
+      type = "git";
+      url = "https://github.com/stretchr/testify";
+      rev = "be8372ae8ec5c6daaed3cc28ebf73c54b737c240";
+      sha256 = "1ljfacbhd180yr0lc9myvxxdka0iji2ihsx0fcczja4ik5f2mb5p";
+    };
+  }
+  {
+    goPackagePath = "github.com/timewasted/linode";
+    fetch = {
+      type = "git";
+      url = "https://github.com/timewasted/linode";
+      rev = "37e84520dcf74488f67654f9c775b9752c232dc1";
+      sha256 = "08gpys1c5xkh7f92fq31wb24vjksfnpbhfwini73dlvyi2w25a3c";
+    };
+  }
+  {
+    goPackagePath = "github.com/urfave/cli";
+    fetch = {
+      type = "git";
+      url = "https://github.com/urfave/cli";
+      rev = "a1c7408de3f632d86eee604a3bb755f1ffb68226";
+      sha256 = "1fq0amfgpccf35nll7xw0k6smwrb7h0wy62n70kfd9kvh64n8hbn";
+    };
+  }
+  {
+    goPackagePath = "golang.org/x/crypto";
+    fetch = {
+      type = "git";
+      url = "https://go.googlesource.com/crypto";
+      rev = "5119cf507ed5294cc409c092980c7497ee5d6fd2";
+      sha256 = "0r8ffhagvzpjrkm25rrlby4h6bsqqlq6kcm01g54iqm7b2yrjy1p";
+    };
+  }
+  {
+    goPackagePath = "golang.org/x/net";
+    fetch = {
+      type = "git";
+      url = "https://go.googlesource.com/net";
+      rev = "f5dfe339be1d06f81b22525fe34671ee7d2c8904";
+      sha256 = "01y9j7pjnnld4ipmzjvs0hls0hh698f2sga8cxaw5y6r5j7igaah";
+    };
+  }
+  {
+    goPackagePath = "golang.org/x/oauth2";
+    fetch = {
+      type = "git";
+      url = "https://go.googlesource.com/oauth2";
+      rev = "543e37812f10c46c622c9575afd7ad22f22a12ba";
+      sha256 = "0kc816fq1zj5wdw4mfa7w2q26rnh273157w8n0d30xpzl8ba2isr";
+    };
+  }
+  {
+    goPackagePath = "google.golang.org/api";
+    fetch = {
+      type = "git";
+      url = "https://code.googlesource.com/google-api-go-client";
+      rev = "068431dcab1a5817548dd244d9795788a98329f4";
+      sha256 = "1yn5qfmmmqbm6k5h8qj5n6ra3xv9aispvjv9kqarxwvv7q5xql83";
+    };
+  }
+  {
+    goPackagePath = "gopkg.in/ini.v1";
+    fetch = {
+      type = "git";
+      url = "https://gopkg.in/ini.v1";
+      rev = "32e4c1e6bc4e7d0d8451aa6b75200d19e37a536a";
+      sha256 = "0mhgxw5q6b0pryhikx3k4wby7g32rwjjljzihi47lwn34kw5y1qn";
+    };
+  }
+  {
+    goPackagePath = "gopkg.in/ns1/ns1-go.v2";
+    fetch = {
+      type = "git";
+      url = "https://gopkg.in/ns1/ns1-go.v2";
+      rev = "1f132c4ac59d2c7022353a8824002a15deb66f1e";
+      sha256 = "0fx646hzhi6w58hiwc76hfjxn0dj9vxbrdqkb64lqxymzxzsrfnb";
+    };
+  }
+  {
+    goPackagePath = "gopkg.in/square/go-jose.v1";
+    fetch = {
+      type = "git";
+      url = "https://gopkg.in/square/go-jose.v1";
+      rev = "aa2e30fdd1fe9dd3394119af66451ae790d50e0d";
+      sha256 = "0drajyadd6c4m5qv0jxcv748qczg8sgxz28nva1jn39f234m02is";
+    };
+  }
+]
diff --git a/pkgs/tools/archivers/unarj/default.nix b/pkgs/tools/archivers/unarj/default.nix
index 9537701ebe7f..2505c012b26b 100644
--- a/pkgs/tools/archivers/unarj/default.nix
+++ b/pkgs/tools/archivers/unarj/default.nix
@@ -6,7 +6,7 @@ stdenv.mkDerivation rec {
 
   src = fetchurl {
     sha256 = "0r027z7a0azrd5k885xvwhrxicpd0ah57jzmaqlypxha2qjw7p6p";
-    url = "http://pkgs.fedoraproject.org/repo/pkgs/unarj/${name}.tar.gz/c6fe45db1741f97155c7def322aa74aa/${name}.tar.gz";
+    url = "http://src.fedoraproject.org/repo/pkgs/unarj/${name}.tar.gz/c6fe45db1741f97155c7def322aa74aa/${name}.tar.gz";
   };
 
   preInstall = ''
diff --git a/pkgs/tools/archivers/zip/default.nix b/pkgs/tools/archivers/zip/default.nix
index cb2d29e239dc..6d979bbf33d8 100644
--- a/pkgs/tools/archivers/zip/default.nix
+++ b/pkgs/tools/archivers/zip/default.nix
@@ -8,7 +8,7 @@ stdenv.mkDerivation {
   src = fetchurl {
     urls = [
       ftp://ftp.info-zip.org/pub/infozip/src/zip30.tgz
-      http://pkgs.fedoraproject.org/repo/pkgs/zip/zip30.tar.gz/7b74551e63f8ee6aab6fbc86676c0d37/zip30.tar.gz
+      http://src.fedoraproject.org/repo/pkgs/zip/zip30.tar.gz/7b74551e63f8ee6aab6fbc86676c0d37/zip30.tar.gz
     ];
     sha256 = "0sb3h3067pzf3a7mlxn1hikpcjrsvycjcnj9hl9b1c3ykcgvps7h";
   };
diff --git a/pkgs/tools/audio/abcm2ps/default.nix b/pkgs/tools/audio/abcm2ps/default.nix
index 6d50a849a778..f93231d80222 100644
--- a/pkgs/tools/audio/abcm2ps/default.nix
+++ b/pkgs/tools/audio/abcm2ps/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "abcm2ps-${version}";
-  version = "8.13.19";
+  version = "8.13.20";
 
   src = fetchFromGitHub {
     owner = "leesavide";
     repo = "abcm2ps";
     rev = "v${version}";
-    sha256 = "0iv8fzl601rkww9dplajwzlfdb8r7142qdsj8xmvrbwqkaval51f";
+    sha256 = "0zgwrclky6b1l1pd07s31azyxf4clwi3cp5x0wjix0wp78b89pbx";
   };
 
   prePatch = ''
diff --git a/pkgs/tools/audio/abcmidi/default.nix b/pkgs/tools/audio/abcmidi/default.nix
index 941c5e343b92..6915f8a90711 100644
--- a/pkgs/tools/audio/abcmidi/default.nix
+++ b/pkgs/tools/audio/abcmidi/default.nix
@@ -2,11 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "abcMIDI-${version}";
-  version = "2018.01.25";
+  version = "2018.02.07";
 
   src = fetchzip {
     url = "http://ifdo.ca/~seymour/runabc/${name}.zip";
-    sha256 = "18h6gqhh75qdi8krpp0m2pxbxi0n08wrh8xay477jm3vaggyr8s9";
+    sha256 = "16hdv114hs5agg288kpbijqw53wdiswjmprpbhy7kgdjnp9ijwxw";
   };
 
   # There is also a file called "makefile" which seems to be preferred by the standard build phase
diff --git a/pkgs/tools/audio/beets/default.nix b/pkgs/tools/audio/beets/default.nix
index 899845a044c6..b8f3318057b4 100644
--- a/pkgs/tools/audio/beets/default.nix
+++ b/pkgs/tools/audio/beets/default.nix
@@ -224,7 +224,7 @@ in pythonPackages.buildPythonApplication rec {
     description = "Music tagger and library organizer";
     homepage = http://beets.radbox.org;
     license = licenses.mit;
-    maintainers = with maintainers; [ aszlig domenkozar pjones profpatsch ];
+    maintainers = with maintainers; [ aszlig domenkozar pjones ];
     platforms = platforms.linux;
   };
 }
diff --git a/pkgs/tools/backup/attic/default.nix b/pkgs/tools/backup/attic/default.nix
deleted file mode 100644
index 754e12e7f776..000000000000
--- a/pkgs/tools/backup/attic/default.nix
+++ /dev/null
@@ -1,56 +0,0 @@
-{ stdenv, fetchzip, python3Packages, openssl, acl, fetchurl, pkgconfig, fuse, attr, which }:
-
-let
-
-  # Old version needed for attic (backup program) due to breaking change in
-  # llfuse >= 0.42.
-  llfuse-0-41 = python3Packages.buildPythonPackage rec {
-    name = "llfuse-0.41.1";
-    src = fetchurl {
-      url = "mirror://pypi/l/llfuse/${name}.tar.bz2";
-      sha256 = "1imlqw9b73086y97izr036f58pgc5akv4ihc2rrf8j5h75jbrlaa";
-    };
-  nativeBuildInputs = [ pkgconfig ];
-    buildInputs = with python3Packages; [ pytest fuse attr which ];
-    propagatedBuildInputs = with python3Packages; [ contextlib2 ];
-    checkPhase = ''
-      py.test
-    '';
-    # FileNotFoundError: [Errno 2] No such file or directory: '/usr/bin'
-    doCheck = false;
-    meta = {
-      description = "Python bindings for the low-level FUSE API";
-      homepage = https://code.google.com/p/python-llfuse/;
-      license = stdenv.lib.licenses.lgpl2Plus;
-      platforms = stdenv.lib.platforms.unix;
-      maintainers = with stdenv.lib.maintainers; [ bjornfor ];
-    };
-  };
-
-in python3Packages.buildPythonApplication rec {
-  name = "attic-${version}";
-  version = "0.16";
-  namePrefix = "";
-
-  src = fetchzip {
-    name = "${name}-src";
-    url = "https://github.com/jborg/attic/archive/${version}.tar.gz";
-    sha256 = "008566hhsd3ck70ql0fdn4vaqjfcnf493gwd49d6294f8r7qn06z";
-  };
-
-  propagatedBuildInputs = with python3Packages;
-    [ cython msgpack openssl acl llfuse-0-41 ];
-
-  preConfigure = ''
-    export ATTIC_OPENSSL_PREFIX="${openssl.dev}"
-    substituteInPlace setup.py --replace "version=versioneer.get_version()" "version='${version}'"
-  '';
-
-  meta = with stdenv.lib; {
-    description = "A deduplicating backup program";
-    homepage = https://attic-backup.org;
-    license = licenses.bsd3;
-    maintainers = [ maintainers.wscott ];
-    platforms = platforms.unix; # Darwin and FreeBSD mentioned on homepage
-  };
-}
diff --git a/pkgs/tools/backup/backup/default.nix b/pkgs/tools/backup/backup/default.nix
index cf97eba8eded..23affbb8af66 100644
--- a/pkgs/tools/backup/backup/default.nix
+++ b/pkgs/tools/backup/backup/default.nix
@@ -1,14 +1,15 @@
-{ stdenv, lib, bundlerEnv, ruby_2_1, curl }:
+{ stdenv, lib, bundlerEnv, ruby, curl }:
 
 bundlerEnv {
   name = "backup_v4";
 
-  ruby = ruby_2_1;
+  inherit ruby;
   gemdir = ./.;
 
   buildInputs = [ curl ];
 
   meta = with lib; {
+    broken = true; # need ruby 2.1
     description = "Easy full stack backup operations on UNIX-like systems";
     homepage    = http://backup.github.io/backup/v4/;
     license     = licenses.mit;
diff --git a/pkgs/tools/backup/borg/default.nix b/pkgs/tools/backup/borg/default.nix
index eb40dfefb83c..4f0d24a27d90 100644
--- a/pkgs/tools/backup/borg/default.nix
+++ b/pkgs/tools/backup/borg/default.nix
@@ -19,7 +19,7 @@ python3Packages.buildPythonApplication rec {
     lz4 openssl python3Packages.setuptools_scm
   ] ++ stdenv.lib.optionals stdenv.isLinux [ acl ];
   propagatedBuildInputs = with python3Packages; [
-    cython msgpack
+    cython msgpack-python
   ] ++ stdenv.lib.optionals (!stdenv.isDarwin) [ llfuse ];
 
   preConfigure = ''
diff --git a/pkgs/tools/backup/burp/default.nix b/pkgs/tools/backup/burp/default.nix
index 783a0796e91b..5540822c99b5 100644
--- a/pkgs/tools/backup/burp/default.nix
+++ b/pkgs/tools/backup/burp/default.nix
@@ -1,18 +1,18 @@
-{ stdenv, fetchFromGitHub, autoreconfHook
+{ stdenv, fetchFromGitHub, autoreconfHook, pkgconfig
 , acl, librsync, ncurses, openssl, zlib, uthash }:
 
 stdenv.mkDerivation rec {
   name = "burp-${version}";
-  version = "2.0.54";
+  version = "2.1.28";
 
   src = fetchFromGitHub {
     owner = "grke";
     repo = "burp";
     rev = version;
-    sha256 = "1z1w013hqxbfjgri0fan2570qwhgwvm4k4ghajbzqg8kly4fgk5x";
+    sha256 = "1i8j15pmnn9cn6cd4dnp28qbisq8cl9l4y3chsmil4xqljr9fi5x";
   };
 
-  nativeBuildInputs = [ autoreconfHook ];
+  nativeBuildInputs = [ autoreconfHook pkgconfig ];
   buildInputs = [ librsync ncurses openssl zlib uthash ]
     ++ stdenv.lib.optional (!stdenv.isDarwin) acl;
 
diff --git a/pkgs/tools/backup/ddar/default.nix b/pkgs/tools/backup/ddar/default.nix
new file mode 100644
index 000000000000..eac589813f47
--- /dev/null
+++ b/pkgs/tools/backup/ddar/default.nix
@@ -0,0 +1,39 @@
+{ lib, buildPythonApplication, fetchFromGitHub, python, protobuf, roundup }:
+
+buildPythonApplication rec {
+  pname = "ddar";
+  version = "1.0";
+
+  src = fetchFromGitHub {
+    owner = "basak";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "158jdy5261k9yw540g48hddy5zyqrr81ir9fjlcy4jnrwfkg7ynm";
+  };
+
+  prePatch = ''
+    substituteInPlace t/local-functions \
+      --replace 'PATH="$ddar_src:$PATH"' 'PATH="$out/bin:$PATH"'
+    # Test requires additional software and compilation of some C programs
+    substituteInPlace t/basic-test.sh \
+      --replace it_stores_and_extracts_corpus0 dont_test
+  '';
+
+  preBuild = ''
+    make -f Makefile.prep synctus/ddar_pb2.py
+  '';
+
+  propagatedBuildInputs = [ protobuf ];
+
+  checkInputs = [ roundup ];
+
+  checkPhase = ''
+    roundup t/basic-test.sh
+  '';
+
+  meta = with lib; {
+    description = "Unix de-duplicating archiver";
+    license = licenses.gpl3;
+    homepage = src.meta.homepage;
+  };
+}
diff --git a/pkgs/tools/backup/diskrsync/default.nix b/pkgs/tools/backup/diskrsync/default.nix
new file mode 100644
index 000000000000..b04a1dab40f5
--- /dev/null
+++ b/pkgs/tools/backup/diskrsync/default.nix
@@ -0,0 +1,27 @@
+{ buildGoPackage, fetchFromGitHub, stdenv }:
+
+buildGoPackage rec {
+
+  name = "${pname}-${version}";
+  pname = "diskrsync";
+  version = "unstable-2018-02-03";
+
+  src = fetchFromGitHub {
+    owner = "dop251";
+    repo = pname;
+    rev = "2f36bd6e5084ce16c12a2ee216ebb2939a7d5730";
+    sha256 = "1rpfk7ds4lpff30aq4d8rw7g9j4bl2hd1bvcwd1pfxalp222zkxn";
+  };
+
+  goPackagePath = "github.com/dop251/diskrsync";
+  goDeps = ./deps.nix;
+
+  meta = with stdenv.lib; {
+    description = "Rsync for block devices and disk images";
+    homepage = https://github.com/dop251/diskrsync;
+    license = licenses.mit;
+    platforms = platforms.all;
+    maintainers = with maintainers; [ jluttine ];
+  };
+
+}
diff --git a/pkgs/tools/backup/diskrsync/deps.nix b/pkgs/tools/backup/diskrsync/deps.nix
new file mode 100644
index 000000000000..684100968e88
--- /dev/null
+++ b/pkgs/tools/backup/diskrsync/deps.nix
@@ -0,0 +1,21 @@
+# This file was generated by https://github.com/kamilchm/go2nix v1.2.1
+[
+  {
+    goPackagePath = "github.com/dop251/spgz";
+    fetch = {
+      type = "git";
+      url = "https://github.com/dop251/spgz";
+      rev = "d50e5e978e08044da0cf9babc6b42b55ec8fe0d5";
+      sha256 = "11h8z6cwxw272rn5zc4y3w9d6py113iaimy681v6xxv26d30m8bx";
+    };
+  }
+  {
+    goPackagePath = "golang.org/x/crypto";
+    fetch = {
+      type = "git";
+      url = "https://go.googlesource.com/crypto";
+      rev = "1875d0a70c90e57f11972aefd42276df65e895b9";
+      sha256 = "1kprrdzr4i4biqn7r9gfxzsmijya06i9838skprvincdb1pm0q2q";
+    };
+  }
+]
diff --git a/pkgs/tools/backup/restic/default.nix b/pkgs/tools/backup/restic/default.nix
index 40d8e0a4fbc4..4a51a65b4065 100644
--- a/pkgs/tools/backup/restic/default.nix
+++ b/pkgs/tools/backup/restic/default.nix
@@ -2,7 +2,7 @@
 
 buildGoPackage rec {
   name = "restic-${version}";
-  version = "0.8.1";
+  version = "0.8.2";
 
   goPackagePath = "github.com/restic/restic";
 
@@ -10,7 +10,7 @@ buildGoPackage rec {
     owner = "restic";
     repo = "restic";
     rev = "v${version}";
-    sha256 = "13pawz031pzyc4ap5kk229cmzj0qjx5x0j1mw7jhwhc4w4ximvl3";
+    sha256 = "1prk8r0kmcscj79fc53a0qjvik6ygjr50xwnahs0amlyh03pyb46";
   };
 
   buildPhase = ''
@@ -19,8 +19,16 @@ buildGoPackage rec {
   '';
 
   installPhase = ''
-    mkdir -p $bin/bin/
+    mkdir -p \
+      $bin/bin \
+      $bin/etc/bash_completion.d \
+      $bin/share/zsh/vendor-completions \
+      $bin/share/man/man1
     cp restic $bin/bin/
+    $bin/bin/restic generate \
+      --bash-completion $bin/etc/bash_completion.d/restic.sh \
+      --zsh-completion $bin/share/zsh/vendor-completions/restic.sh \
+      --man $bin/share/man/man1
   '';
 
   meta = with stdenv.lib; {
diff --git a/pkgs/tools/cd-dvd/cue2pops/default.nix b/pkgs/tools/cd-dvd/cue2pops/default.nix
new file mode 100644
index 000000000000..6523c8a0cf3f
--- /dev/null
+++ b/pkgs/tools/cd-dvd/cue2pops/default.nix
@@ -0,0 +1,30 @@
+{ stdenv, fetchFromGitHub }:
+
+with stdenv.lib;
+stdenv.mkDerivation rec {
+  name = "cue2pops-${version}";
+  version = "git-2018-01-04";
+
+  src = fetchFromGitHub {
+    owner = "makefu";
+    repo = "cue2pops-linux";
+    rev = "541863adf23fdecde92eba5899f8d58586ca4551";
+    sha256 = "05w84726g3k33rz0wwb9v77g7xh4cnhy9sxlpilf775nli9bynrk";
+  };
+
+  dontConfigure = true;
+
+  makeFlags = ["CC=cc"];
+
+  installPhase = ''
+    install --directory --mode=755 $out/bin
+    install --mode=755 cue2pops $out/bin
+  '';
+
+  meta = {
+    description = "Convert CUE to ISO suitable to POPStarter";
+    homepage = https://github.com/makefu/cue2pops-linux;
+    maintainers = with maintainers; [ AndersonTorres ];
+    platforms = platforms.all;
+  };
+}
diff --git a/pkgs/tools/cd-dvd/ecm-tools/default.nix b/pkgs/tools/cd-dvd/ecm-tools/default.nix
new file mode 100644
index 000000000000..ec814d97bde0
--- /dev/null
+++ b/pkgs/tools/cd-dvd/ecm-tools/default.nix
@@ -0,0 +1,29 @@
+{ stdenv, fetchFromGitHub }:
+
+stdenv.mkDerivation rec {
+  name = "ecm-tools-${version}";
+  version = "1.0.3";
+
+  src = fetchFromGitHub {
+    owner = "alucryd";
+    repo = "ecm-tools";
+    rev = "v${version}";
+    sha256 = "1rvyx5gcy8lfklgj80szlz3312x45wzx0d9jsgwyvy8f6m4nnb0c";
+  };
+
+  dontConfigure = true;
+
+  installPhase = ''
+    install --directory --mode=755 $out/bin
+    install --mode=755 bin2ecm $out/bin
+    (cd $out/bin; ln -s bin2ecm ecm2bin)
+  '';
+
+  meta = with stdenv.lib; {
+    description = "A utility to uncompress ECM files to BIN CD format";
+    homepage = https://github.com/alucryd/ecm-tools;
+    license = licenses.gpl3;
+    maintainers = with maintainers; [ AndersonTorres ];
+    platforms = platforms.all;
+  };
+}
diff --git a/pkgs/tools/compression/xz/default.nix b/pkgs/tools/compression/xz/default.nix
index 05cc672ab15e..8d02e926e57f 100644
--- a/pkgs/tools/compression/xz/default.nix
+++ b/pkgs/tools/compression/xz/default.nix
@@ -13,7 +13,7 @@ stdenv.mkDerivation rec {
   doCheck = true;
 
   # In stdenv-linux, prevent a dependency on bootstrap-tools.
-  preConfigure = "unset CONFIG_SHELL";
+  preConfigure = "CONFIG_SHELL=/bin/sh";
 
   postInstall = "rm -rf $out/share/doc";
 
diff --git a/pkgs/tools/filesystems/archivemount/default.nix b/pkgs/tools/filesystems/archivemount/default.nix
index f4133f12541f..72403bd3dc0c 100644
--- a/pkgs/tools/filesystems/archivemount/default.nix
+++ b/pkgs/tools/filesystems/archivemount/default.nix
@@ -1,14 +1,14 @@
 { stdenv, fetchurl, pkgconfig, fuse, libarchive }:
 
 let
-  name = "archivemount-0.8.3";
+  name = "archivemount-0.8.7";
 in
 stdenv.mkDerivation {
   inherit name;
 
   src = fetchurl {
     url = "http://www.cybernoia.de/software/archivemount/${name}.tar.gz";
-    sha256 = "1zv1fvik76kpp1q5f2dz01f4fwg1m5a8rl168px47jy9nyl9k277";
+    sha256 = "1diiw6pnlnrnikn6l5ld92dx59lhrxjlqms8885vwbynsjl5q127";
   };
 
   nativeBuildInputs = [ pkgconfig ];
diff --git a/pkgs/tools/filesystems/bcachefs-tools/default.nix b/pkgs/tools/filesystems/bcachefs-tools/default.nix
index fc4d3f505cdc..0a5017de53c4 100644
--- a/pkgs/tools/filesystems/bcachefs-tools/default.nix
+++ b/pkgs/tools/filesystems/bcachefs-tools/default.nix
@@ -1,29 +1,25 @@
-{ stdenv, pkgs, fetchgit, pkgconfig, attr, libuuid, libscrypt, libsodium, keyutils, liburcu, zlib, libaio }:
+{ stdenv, pkgs, fetchgit, pkgconfig, attr, libuuid, libscrypt, libsodium
+, keyutils, liburcu, zlib, libaio }:
 
 stdenv.mkDerivation rec {
-  name = "bcachefs-tools-unstable-2017-08-28";
+  name = "bcachefs-tools-unstable-2018-02-08";
 
   src = fetchgit {
     url = "https://evilpiepirate.org/git/bcachefs-tools.git";
-    rev = "b1814f2dd0c6b61a12a2ebb67a13d406d126b227";
-    sha256 = "05ba1h09rrqj6vjr3q37ybca3nbrmnifmffdyk83622l28fpv350";
+    rev = "fc96071b58c28ea492103e7649c0efd5bab50ead";
+    sha256 = "0a2sxkz0mkmvb5g4k2v8g2c89dj29haw9bd3bpwk0dsfkjif92vy";
   };
 
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ attr libuuid libscrypt libsodium keyutils liburcu zlib libaio ];
 
-  preConfigure = ''
-    substituteInPlace cmd_migrate.c --replace /usr/include/dirent.h ${stdenv.lib.getDev stdenv.cc.libc}/include/dirent.h
-  '';
-
   installFlags = [ "PREFIX=$(out)" ];
 
   meta = with stdenv.lib; {
     description = "Tool for managing bcachefs filesystems";
-    homepage = http://bcachefs.org/;
+    homepage = https://bcachefs.org/;
     license = licenses.gpl2;
     maintainers = with maintainers; [ davidak ];
     platforms = platforms.linux;
   };
 }
-
diff --git a/pkgs/tools/filesystems/ceph/0001-kv-RocksDBStore-API-break-additional.patch b/pkgs/tools/filesystems/ceph/0001-kv-RocksDBStore-API-break-additional.patch
new file mode 100644
index 000000000000..0b6f1d30a4c9
--- /dev/null
+++ b/pkgs/tools/filesystems/ceph/0001-kv-RocksDBStore-API-break-additional.patch
@@ -0,0 +1,58 @@
+Seulement dans ceph: ceph.old
+diff -ur ceph.old/src/kv/RocksDBStore.cc ceph/src/kv/RocksDBStore.cc
+--- ceph.old/src/kv/RocksDBStore.cc	1980-01-02 00:00:00.000000000 +0100
++++ ceph/src/kv/RocksDBStore.cc	2018-01-24 14:08:35.017553372 +0100
+@@ -505,7 +505,7 @@
+   // considering performance overhead, default is disabled
+   if (g_conf->rocksdb_perf) {
+     rocksdb::SetPerfLevel(rocksdb::PerfLevel::kEnableTimeExceptForMutex);
+-    rocksdb::perf_context.Reset();
++    rocksdb::get_perf_context()->Reset();
+   }
+ 
+   RocksDBTransactionImpl * _t =
+@@ -532,13 +532,13 @@
+     utime_t write_wal_time;
+     utime_t write_pre_and_post_process_time;
+     write_wal_time.set_from_double(
+-	static_cast<double>(rocksdb::perf_context.write_wal_time)/1000000000);
++	static_cast<double>(rocksdb::get_perf_context()->write_wal_time)/1000000000);
+     write_memtable_time.set_from_double(
+-	static_cast<double>(rocksdb::perf_context.write_memtable_time)/1000000000);
++	static_cast<double>(rocksdb::get_perf_context()->write_memtable_time)/1000000000);
+     write_delay_time.set_from_double(
+-	static_cast<double>(rocksdb::perf_context.write_delay_time)/1000000000);
++	static_cast<double>(rocksdb::get_perf_context()->write_delay_time)/1000000000);
+     write_pre_and_post_process_time.set_from_double(
+-	static_cast<double>(rocksdb::perf_context.write_pre_and_post_process_time)/1000000000);
++	static_cast<double>(rocksdb::get_perf_context()->write_pre_and_post_process_time)/1000000000);
+     logger->tinc(l_rocksdb_write_memtable_time, write_memtable_time);
+     logger->tinc(l_rocksdb_write_delay_time, write_delay_time);
+     logger->tinc(l_rocksdb_write_wal_time, write_wal_time);
+@@ -558,7 +558,7 @@
+   // considering performance overhead, default is disabled
+   if (g_conf->rocksdb_perf) {
+     rocksdb::SetPerfLevel(rocksdb::PerfLevel::kEnableTimeExceptForMutex);
+-    rocksdb::perf_context.Reset();
++    rocksdb::get_perf_context()->Reset();
+   }
+ 
+   RocksDBTransactionImpl * _t =
+@@ -586,13 +586,13 @@
+     utime_t write_wal_time;
+     utime_t write_pre_and_post_process_time;
+     write_wal_time.set_from_double(
+-	static_cast<double>(rocksdb::perf_context.write_wal_time)/1000000000);
++	static_cast<double>(rocksdb::get_perf_context()->write_wal_time)/1000000000);
+     write_memtable_time.set_from_double(
+-	static_cast<double>(rocksdb::perf_context.write_memtable_time)/1000000000);
++	static_cast<double>(rocksdb::get_perf_context()->write_memtable_time)/1000000000);
+     write_delay_time.set_from_double(
+-	static_cast<double>(rocksdb::perf_context.write_delay_time)/1000000000);
++	static_cast<double>(rocksdb::get_perf_context()->write_delay_time)/1000000000);
+     write_pre_and_post_process_time.set_from_double(
+-	static_cast<double>(rocksdb::perf_context.write_pre_and_post_process_time)/1000000000);
++	static_cast<double>(rocksdb::get_perf_context()->write_pre_and_post_process_time)/1000000000);
+     logger->tinc(l_rocksdb_write_memtable_time, write_memtable_time);
+     logger->tinc(l_rocksdb_write_delay_time, write_delay_time);
+     logger->tinc(l_rocksdb_write_wal_time, write_wal_time);
diff --git a/pkgs/tools/filesystems/ceph/default.nix b/pkgs/tools/filesystems/ceph/default.nix
index 334525e79026..0f712853f24a 100644
--- a/pkgs/tools/filesystems/ceph/default.nix
+++ b/pkgs/tools/filesystems/ceph/default.nix
@@ -1,20 +1,12 @@
 { callPackage, fetchgit, fetchpatch, ... } @ args:
 
 callPackage ./generic.nix (args // rec {
-  version = "9.2.0";
+  version = "12.2.2";
 
   src = fetchgit {
     url = "https://github.com/ceph/ceph.git";
     rev = "refs/tags/v${version}";
-    sha256 = "0a2v3bgkrbkzardcw7ymlhhyjlwi08qmcm7g34y2sjsxk9bd78an";
+    sha256 = "01anqxyffa8l2lzgyb0dj6fjicfjdx2cq9y1klh24x69gxwkdh00";
   };
 
-  patches = [
-    ./fix-pythonpath.patch
-    # For building with xfsprogs 4.5.0:
-    (fetchpatch {
-      url = "https://github.com/ceph/ceph/commit/602425abd5cef741fc1b5d4d1dd70c68e153fc8d.patch";
-      sha256 = "1iyf0ml2n50ki800vjich8lvzmcdviwqwkbs6cdj0vqv2nc5ii1g";
-    })
-  ];
 })
diff --git a/pkgs/tools/filesystems/ceph/generic.nix b/pkgs/tools/filesystems/ceph/generic.nix
index ffcf20d1651b..a18051f9c126 100644
--- a/pkgs/tools/filesystems/ceph/generic.nix
+++ b/pkgs/tools/filesystems/ceph/generic.nix
@@ -1,12 +1,17 @@
-{ stdenv, ensureNewerSourcesHook, autoconf, automake, makeWrapper, pkgconfig
-, libtool, which, git
-, boost, python2Packages, libxml2, zlib
+{ stdenv, ensureNewerSourcesHook, cmake, pkgconfig
+, which, git
+, boost, python2Packages
+, libxml2, zlib
+, openldap, lttngUst
+, babeltrace, gperf
+, cunit, snappy
+, rocksdb
 
 # Optional Dependencies
-, snappy ? null, leveldb ? null, yasm ? null, fcgi ? null, expat ? null
+, yasm ? null, fcgi ? null, expat ? null
 , curl ? null, fuse ? null, libibverbs ? null, librdmacm ? null
 , libedit ? null, libatomic_ops ? null, kinetic-cpp-client ? null
-, rocksdb ? null, libs3 ? null
+, libs3 ? null
 
 # Mallocs
 , jemalloc ? null, gperftools ? null
@@ -30,21 +35,11 @@ assert cryptopp != null || (nss != null && nspr != null);
 with stdenv;
 with stdenv.lib;
 let
-  inherit (python2Packages) python;
-  mkFlag = trueStr: falseStr: cond: name: val: "--"
-    + (if cond then trueStr else falseStr)
-    + name
-    + optionalString (val != null && cond != false) "=${val}";
-  mkEnable = mkFlag "enable-" "disable-";
-  mkWith = mkFlag "with-" "without-";
-  mkOther = mkFlag "" "" true;
 
   shouldUsePkg = pkg_: let pkg = (builtins.tryEval pkg_).value;
     in if lib.any (x: x == system) (pkg.meta.platforms or [])
       then pkg else null;
 
-  optSnappy = shouldUsePkg snappy;
-  optLeveldb = shouldUsePkg leveldb;
   optYasm = shouldUsePkg yasm;
   optFcgi = shouldUsePkg fcgi;
   optExpat = shouldUsePkg expat;
@@ -55,7 +50,6 @@ let
   optLibedit = shouldUsePkg libedit;
   optLibatomic_ops = shouldUsePkg libatomic_ops;
   optKinetic-cpp-client = shouldUsePkg kinetic-cpp-client;
-  optRocksdb = shouldUsePkg rocksdb;
   optLibs3 = if versionAtLeast version "10.0.0" then null else shouldUsePkg libs3;
 
   optJemalloc = shouldUsePkg jemalloc;
@@ -69,13 +63,11 @@ let
   optLibxfs = shouldUsePkg libxfs;
   optZfs = shouldUsePkg zfs;
 
-  hasServer = optSnappy != null && optLeveldb != null;
-  hasMon = hasServer;
-  hasMds = hasServer;
-  hasOsd = hasServer;
+  hasMon = true;
+  hasMds = true;
+  hasOsd = true;
   hasRadosgw = optFcgi != null && optExpat != null && optCurl != null && optLibedit != null;
 
-  hasRocksdb = versionAtLeast version "9.0.0" && optRocksdb != null;
 
   # TODO: Reenable when kinetic support is fixed
   #hasKinetic = versionAtLeast version "9.0.0" && optKinetic-cpp-client != null;
@@ -93,192 +85,80 @@ let
     none = [ ];
   };
 
-  wrapArgs = "--set PYTHONPATH \"$(toPythonPath $lib)\""
-    + " --prefix PYTHONPATH : \"$(toPythonPath ${python2Packages.flask})\""
-    + " --set PATH \"$out/bin\"";
+  ceph-python-env = python2Packages.python.withPackages (ps: [ 
+	ps.sphinx
+	ps.flask
+	ps.argparse
+	ps.cython 
+	ps.setuptools
+	ps.pip
+	]);
+
 in
 stdenv.mkDerivation {
   name="ceph-${version}";
 
   inherit src;
 
-  patches = patches ++ [
-    ./0001-Makefile-env-Don-t-force-sbin.patch
+  patches = [ 
+ #	 ./ceph-patch-cmake-path.patch
+    ./0001-kv-RocksDBStore-API-break-additional.patch   
   ];
 
   nativeBuildInputs = [
-    autoconf automake makeWrapper pkgconfig libtool which git
+    cmake
+    pkgconfig which git
     (ensureNewerSourcesHook { year = "1980"; })
-  ]
-    ++ optionals (versionAtLeast version "9.0.2") [
-      python2Packages.setuptools python2Packages.argparse
-    ];
+  ];
+  
   buildInputs = buildInputs ++ cryptoLibsMap.${cryptoStr} ++ [
-    boost python libxml2 optYasm optLibatomic_ops optLibs3 malloc python2Packages.flask zlib
-  ] ++ optionals (versionAtLeast version "9.0.0") [
-    python2Packages.sphinx # Used for docs
+    boost ceph-python-env libxml2 optYasm optLibatomic_ops optLibs3 
+    malloc zlib openldap lttngUst babeltrace gperf cunit
+    snappy rocksdb
   ] ++ optionals stdenv.isLinux [
     linuxHeaders libuuid udev keyutils optLibaio optLibxfs optZfs
-  ] ++ optionals hasServer [
-    optSnappy optLeveldb
   ] ++ optionals hasRadosgw [
     optFcgi optExpat optCurl optFuse optLibedit
-  ] ++ optionals hasRocksdb [
-    optRocksdb
   ] ++ optionals hasKinetic [
     optKinetic-cpp-client
   ];
-
-  postPatch = ''
-    # Fix zfs pkgconfig detection
-    sed -i 's,\[zfs\],\[libzfs\],g' configure.ac
-
-    # Fix seagate kinetic linking
-    sed -i 's,libcrypto.a,-lcrypto,g' src/os/Makefile.am
-  '' + optionalString (versionAtLeast version "9.0.0") ''
-    # Fix gmock
-    patchShebangs src/gmock
+  
+  preConfigure =''
+    # rip off submodule that interfer with system libs
+	rm -rf src/boost
+	rm -rf src/rocksdb
+	
+	# require LD_LIBRARY_PATH for cython to find internal dep
+	export LD_LIBRARY_PATH="$PWD/build/lib:$LD_LIBRARY_PATH"
+	
+	# requires setuptools due to embedded in-cmake setup.py usage
+	export PYTHONPATH="${python2Packages.setuptools}/lib/python2.7/site-packages/:$PYTHONPATH"
   '';
 
-  preConfigure = ''
-    # Ceph expects the arch command to be usable during configure
-    # for detecting the assembly type
-    mkdir -p mybin
-    echo "#${stdenv.shell} -e" >> mybin/arch
-    echo "uname -m" >> mybin/arch
-    chmod +x mybin/arch
-    PATH="$PATH:$(pwd)/mybin"
-
-    ./autogen.sh
-
-    # Fix the python site-packages install directory
-    sed -i "s,\(PYTHON\(\|_EXEC\)_PREFIX=\).*,\1'$lib',g" configure
-
-    # Fix the PYTHONPATH for installing ceph-detect-init to $out
-    mkdir -p "$(toPythonPath $out)"
-    export PYTHONPATH="$(toPythonPath $out):$PYTHONPATH"
-  '';
-
-  configureFlags = [
-    (mkOther                               "exec_prefix"         "\${out}")
-    (mkOther                               "sysconfdir"          "/etc")
-    (mkOther                               "localstatedir"       "/var")
-    (mkOther                               "libdir"              "\${lib}/lib")
-    (mkOther                               "includedir"          "\${lib}/include")
-    (mkWith   true                         "rbd"                  null)
-    (mkWith   true                         "cephfs"               null)
-    (mkWith   hasRadosgw                   "radosgw"              null)
-    (mkWith   true                         "radosstriper"         null)
-    (mkWith   hasServer                    "mon"                  null)
-    (mkWith   hasServer                    "osd"                  null)
-    (mkWith   hasServer                    "mds"                  null)
-    (mkEnable true                         "client"               null)
-    (mkEnable hasServer                    "server"               null)
-    (mkWith   (cryptoStr == "cryptopp")    "cryptopp"             null)
-    (mkWith   (cryptoStr == "nss")         "nss"                  null)
-    (mkEnable false                        "root-make-check"      null)
-    (mkWith   false                        "profiler"             null)
-    (mkWith   false                        "debug"                null)
-    (mkEnable false                        "coverage"             null)
-    (mkWith   (optFuse != null)            "fuse"                 null)
-    (mkWith   (malloc == optJemalloc)      "jemalloc"             null)
-    (mkWith   (malloc == optGperftools)    "tcmalloc"             null)
-    (mkEnable false                        "pgrefdebugging"       null)
-    (mkEnable false                        "cephfs-java"          null)
-    (mkWith   (optLibatomic_ops != null)   "libatomic-ops"        null)
-    (mkWith   true                         "ocf"                  null)
-    (mkWith   hasKinetic                   "kinetic"              null)
-    (mkWith   hasRocksdb                   "librocksdb"           null)
-    (mkWith   false                        "librocksdb-static"    null)
-  ] ++ optional stdenv.isLinux [
-    (mkWith   (optLibaio != null)          "libaio"               null)
-    (mkWith   (optLibxfs != null)          "libxfs"               null)
-    (mkWith   (optZfs != null)             "libzfs"               null)
-  ] ++ optional (versionAtLeast version "0.94.3") [
-    (mkWith   false                        "tcmalloc-minimal"     null)
-  ] ++ optional (versionAtLeast version "9.0.1") [
-    (mkWith   false                        "valgrind"             null)
-  ] ++ optional (versionAtLeast version "9.0.2") [
-    (mkWith   true                         "man-pages"            null)
-    (mkWith   true                         "systemd-libexec-dir"  "\${out}/libexec")
-  ] ++ optional (versionOlder version "9.1.0") [
-    (mkWith   (optLibs3 != null)           "system-libs3"         null)
-    (mkWith   true                         "rest-bench"           null)
-  ] ++ optional (versionAtLeast version "9.1.0") [
-    (mkWith   true                         "rgw-user"             "rgw")
-    (mkWith   true                         "rgw-group"            "rgw")
-    (mkWith   true                         "systemd-unit-dir"     "\${out}/etc/systemd/system")
-    (mkWith   false                        "selinux"              null)  # TODO: Implement
+  cmakeFlags = [ 
+    "-DENABLE_GIT_VERSION=OFF"
+    "-DWITH_SYSTEM_BOOST=ON"
+    "-DWITH_SYSTEM_ROCKSDB=ON"
+    "-DWITH_LEVELDB=OFF"
+    
+    # enforce shared lib
+    "-DBUILD_SHARED_LIBS=ON"
+    
+    # disable cephfs, cmake build broken for now
+    "-DWITH_CEPHFS=OFF"
+    "-DWITH_LIBCEPHFS=OFF"
   ];
 
-  preBuild = optionalString (versionAtLeast version "9.0.0") ''
-    (cd src/gmock; make -j $NIX_BUILD_CORES)
-  '';
-
-  installFlags = [ "sysconfdir=\${out}/etc" ];
-
-  outputs = [ "out" "lib" ];
-
-  postInstall = ''
-    # Wrap all of the python scripts
-    wrapProgram $out/bin/ceph ${wrapArgs}
-    wrapProgram $out/bin/ceph-brag ${wrapArgs}
-    wrapProgram $out/bin/ceph-rest-api ${wrapArgs}
-    wrapProgram $out/sbin/ceph-create-keys ${wrapArgs}
-    wrapProgram $out/sbin/ceph-disk ${wrapArgs}
-
-    # Bring in lib as a run-time dependency
-    mkdir -p $out/nix-support
-    echo "$lib" > $out/nix-support/propagated-build-inputs
-
-    # Fix the python library loading
-    find $lib/lib -name \*.pyc -or -name \*.pyd -exec rm {} \;
-    for PY in $(find $lib/lib -name \*.py); do
-      LIBS="$(sed -n "s/.*find_library('\([^)]*\)').*/\1/p" "$PY")"
-
-      # Delete any calls to find_library
-      sed -i '/find_library/d' "$PY"
-
-      # Fix each find_library call
-      for LIB in $LIBS; do
-        REALLIB="$lib/lib/lib$LIB.so"
-        sed -i "s,\(lib$LIB = CDLL(\).*,\1'$REALLIB'),g" "$PY"
-      done
-
-      # Reapply compilation optimizations
-      NAME=$(basename -s .py "$PY")
-      rm -f "$PY"{c,o}
-      pushd "$(dirname $PY)"
-      python -c "import $NAME"
-      python -O -c "import $NAME"
-      popd
-      test -f "$PY"c
-      test -f "$PY"o
-    done
-
-    # Fix .la file link dependencies
-    find "$lib/lib" -name \*.la | xargs sed -i \
-      -e 's,-lboost_[a-z]*,-L${boost.out}/lib \0,g' \
-  '' + optionalString (cryptoStr == "cryptopp") ''
-      -e 's,-lcryptopp,-L${optCryptopp}/lib \0,g' \
-  '' + optionalString (cryptoStr == "nss") ''
-      -e 's,-l\(plds4\|plc4\|nspr4\),-L${optNss}/lib \0,g' \
-      -e 's,-l\(ssl3\|smime3\|nss3\|nssutil3\),-L${optNspr}/lib \0,g' \
-  '' + ''
-
-  '';
-
   enableParallelBuilding = true;
+  
+  outputs = [ "dev" "lib" "out" "doc" ];
 
   meta = {
     homepage = http://ceph.com/;
     description = "Distributed storage system";
     license = licenses.lgpl21;
-    maintainers = with maintainers; [ ak wkennington ];
+    maintainers = with maintainers; [ adev ak wkennington ];
     platforms = platforms.unix;
-    # Broken because of https://lwn.net/Vulnerabilities/709844/
-    # and our version is quite out of date.
-    broken = true;
   };
 
   passthru.version = version;
diff --git a/pkgs/tools/filesystems/cryfs/default.nix b/pkgs/tools/filesystems/cryfs/default.nix
index 7bbfafef819d..dfd522f5a094 100644
--- a/pkgs/tools/filesystems/cryfs/default.nix
+++ b/pkgs/tools/filesystems/cryfs/default.nix
@@ -5,13 +5,13 @@
 
 stdenv.mkDerivation rec {
   name = "cryfs-${version}";
-  version = "0.9.8";
+  version = "0.9.9";
 
   src = fetchFromGitHub {
     owner  = "cryfs";
     repo   = "cryfs";
     rev    = "${version}";
-    sha256 = "1lrzmzjakv08qjq09a3krllfw5vrgblfxzijpf3lm3yjgih63r1k";
+    sha256 = "07f2k2b595m3vkwwlmlc0m7px0nwrrzrph3z6sss9354m0b0lcri";
   };
 
   prePatch = ''
diff --git a/pkgs/tools/filesystems/exfat/default.nix b/pkgs/tools/filesystems/exfat/default.nix
index 831594973e21..47ff22ae20dd 100644
--- a/pkgs/tools/filesystems/exfat/default.nix
+++ b/pkgs/tools/filesystems/exfat/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "exfat-${version}";
-  version = "1.2.7";
+  version = "1.2.8";
 
   src = fetchFromGitHub {
     owner = "relan";
     repo = "exfat";
     rev = "v${version}";
-    sha256 = "1sk4z133djh8sdvx2vvmd8kf4qfly2i3hdar4zpg0s41jpbzdx69";
+    sha256 = "0q02g3yvfmxj70h85a69d8s4f6y7jask268vr87j44ya51lzndd9";
   };
 
   nativeBuildInputs = [ autoreconfHook pkgconfig ];
diff --git a/pkgs/tools/filesystems/file-rename/default.nix b/pkgs/tools/filesystems/file-rename/default.nix
new file mode 100644
index 000000000000..1818a517fd25
--- /dev/null
+++ b/pkgs/tools/filesystems/file-rename/default.nix
@@ -0,0 +1,24 @@
+{ stdenv, fetchurl, perlPackages, makeWrapper }:
+
+perlPackages.buildPerlPackage rec {
+  name = "File-Rename-0.20";
+
+  src = fetchurl {
+    url = "mirror://cpan/authors/id/R/RM/RMBARKER/${name}.tar.gz";
+    sha256 = "1cf6xx2hiy1xalp35fh8g73j67r0w0g66jpcbc6971x9jbm7bvjy";
+  };
+
+  nativeBuildInputs = [ makeWrapper ];
+
+  postInstall = ''
+    wrapProgram $out/bin/rename \
+      --prefix PERL5LIB : $out/lib/perl5/site_perl
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Perl extension for renaming multiple files";
+    homepage = http://search.cpan.org/~rmbarker;
+    license = licenses.artistic1;
+    maintainers = with maintainers; [ peterhoeg ];
+  };
+}
diff --git a/pkgs/tools/filesystems/idsk/default.nix b/pkgs/tools/filesystems/idsk/default.nix
new file mode 100644
index 000000000000..617457f55b61
--- /dev/null
+++ b/pkgs/tools/filesystems/idsk/default.nix
@@ -0,0 +1,30 @@
+{ stdenv, fetchFromGitHub, cmake }:
+
+stdenv.mkDerivation rec {
+
+  repo = "idsk";
+  version = "unstable-2018-02-11";
+  rev = "1846729ac3432aa8c2c0525be45cfff8a513e007";
+  name = "${repo}-${version}";
+
+  meta = with stdenv.lib; {
+    description = "Manipulating CPC dsk images and files";
+    homepage = https://github.com/cpcsdk/idsk ;
+    license = "unknown";
+    maintainers = [ maintainers.genesis ];
+    platforms = platforms.linux;
+  };
+
+  src = fetchFromGitHub {
+    inherit rev repo;
+    owner = "cpcsdk";
+    sha256 = "0d891lvf2nc8bys8kyf69k54rf3jlwqrcczbff8xi0w4wsiy5ckv";
+  };
+
+  nativeBuildInputs = [ cmake ];
+
+  installPhase = ''
+    mkdir -p $out/bin
+    cp iDSK $out/bin
+  '';
+}
diff --git a/pkgs/tools/filesystems/mergerfs/default.nix b/pkgs/tools/filesystems/mergerfs/default.nix
index 929c6690a269..a97f67b1b9e8 100644
--- a/pkgs/tools/filesystems/mergerfs/default.nix
+++ b/pkgs/tools/filesystems/mergerfs/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "mergerfs-${version}";
-  version = "2.23.0";
+  version = "2.23.1";
 
   # not using fetchFromGitHub because of changelog being built with git log
   src = fetchgit {
     url = "https://github.com/trapexit/mergerfs";
     rev = "refs/tags/${version}";
-    sha256 = "0k4nn0f4c355q7hnni7iia8qi9m0khvyd04hx1hmlrnf0zsi9mfw";
+    sha256 = "0kbw64fkp3pjc7qm3y1q0ja20v3lhxi0nsq6gd19rq3m7ch9hcgl";
     deepClone = true;
     leaveDotGit = true;
   };
diff --git a/pkgs/tools/filesystems/nixpart/0.4/pyblock.nix b/pkgs/tools/filesystems/nixpart/0.4/pyblock.nix
index 3ed145c82f2d..6fb9bd98fb36 100644
--- a/pkgs/tools/filesystems/nixpart/0.4/pyblock.nix
+++ b/pkgs/tools/filesystems/nixpart/0.4/pyblock.nix
@@ -6,7 +6,7 @@ stdenv.mkDerivation rec {
   md5_path = "f6d33a8362dee358517d0a9e2ebdd044";
 
   src = fetchurl rec {
-    url = "http://pkgs.fedoraproject.org/repo/pkgs/python-pyblock/"
+    url = "http://src.fedoraproject.org/repo/pkgs/python-pyblock/"
         + "${name}.tar.bz2/${md5_path}/${name}.tar.bz2";
     sha256 = "f6cef88969300a6564498557eeea1d8da58acceae238077852ff261a2cb1d815";
   };
diff --git a/pkgs/tools/filesystems/nixpart/0.4/pykickstart.nix b/pkgs/tools/filesystems/nixpart/0.4/pykickstart.nix
index 1da01bc2e607..b86c0e5229af 100644
--- a/pkgs/tools/filesystems/nixpart/0.4/pykickstart.nix
+++ b/pkgs/tools/filesystems/nixpart/0.4/pykickstart.nix
@@ -6,7 +6,7 @@ buildPythonApplication rec {
   md5_path = "d249f60aa89b1b4facd63f776925116d";
 
   src = fetchurl rec {
-    url = "http://pkgs.fedoraproject.org/repo/pkgs/pykickstart/"
+    url = "http://src.fedoraproject.org/repo/pkgs/pykickstart/"
         + "${name}.tar.gz/${md5_path}/${name}.tar.gz";
     sha256 = "e0d0f98ac4c5607e6a48d5c1fba2d50cc804de1081043f9da68cbfc69cad957a";
   };
diff --git a/pkgs/tools/filesystems/snapraid/default.nix b/pkgs/tools/filesystems/snapraid/default.nix
index 597be1b0f42f..279d6adf9a22 100644
--- a/pkgs/tools/filesystems/snapraid/default.nix
+++ b/pkgs/tools/filesystems/snapraid/default.nix
@@ -2,15 +2,17 @@
 
 stdenv.mkDerivation rec {
   name = "snapraid-${version}";
-  version = "11.1";
+  version = "11.2";
 
   src = fetchFromGitHub {
     owner = "amadvance";
     repo = "snapraid";
     rev = "v${version}";
-    sha256 = "1vgyiagn6qvyyz4jkf8pzlg0w9apb6mzza97a9x03p82fav2afx0";
+    sha256 = "01z8fl3x2j5bnm0rybj7hhch18is6dkwqc43yzwc6418spr4imsd";
   };
 
+  VERSION = version;
+
   doCheck = true;
 
   nativeBuildInputs = [ autoreconfHook ];
diff --git a/pkgs/tools/graphics/graph-easy/default.nix b/pkgs/tools/graphics/graph-easy/default.nix
new file mode 100644
index 000000000000..e505f0bb6db5
--- /dev/null
+++ b/pkgs/tools/graphics/graph-easy/default.nix
@@ -0,0 +1,18 @@
+{ stdenv, buildPerlPackage, fetchurl }:
+
+buildPerlPackage rec {
+  name = "Graph-Easy-${version}";
+  version = "0.76";
+  src = fetchurl {
+    url = "mirror://cpan/authors/id/S/SH/SHLOMIF/${name}.tar.gz";
+    sha256 = "d4a2c10aebef663b598ea37f3aa3e3b752acf1fbbb961232c3dbe1155008d1fa";
+  };
+  
+  meta = with stdenv.lib; {
+    homepage = http://search.cpan.org/~tels/Graph-Easy/bin/graph-easy;
+    description = "Render/convert graphs in/from various formats";
+    license = licenses.gpl1;
+    platforms = platforms.linux;
+    maintainers = [ maintainers.jensbin ];
+  };
+}
diff --git a/pkgs/tools/graphics/graphviz/base.nix b/pkgs/tools/graphics/graphviz/base.nix
index 8a46b302dcdf..f61c7923d794 100644
--- a/pkgs/tools/graphics/graphviz/base.nix
+++ b/pkgs/tools/graphics/graphviz/base.nix
@@ -31,7 +31,10 @@ stdenv.mkDerivation rec {
   CPPFLAGS = stdenv.lib.optionalString (xorg != null && stdenv.isDarwin)
     "-I${cairo.dev}/include/cairo";
 
-  configureFlags = optional (xorg == null) "--without-x";
+  configureFlags = [
+    "--with-ltdl-lib=${libtool.lib}/lib"
+    "--with-ltdl-include=${libtool}/include"
+  ] ++ stdenv.lib.optional (xorg == null) [ "--without-x" ];
 
   postPatch = ''
     for f in $(find . -name Makefile.in); do
diff --git a/pkgs/tools/graphics/oxipng/default.nix b/pkgs/tools/graphics/oxipng/default.nix
new file mode 100644
index 000000000000..1a2b5b19e37a
--- /dev/null
+++ b/pkgs/tools/graphics/oxipng/default.nix
@@ -0,0 +1,22 @@
+{ stdenv, fetchFromGitHub, rustPlatform }:
+
+rustPlatform.buildRustPackage rec {
+  version = "1.0.0";
+  name = "oxipng-${version}";
+
+  src = fetchFromGitHub {
+    owner = "shssoichiro";
+    repo = "oxipng";
+    rev = "v${version}";
+    sha256 = "1w3y9qy72sfz6zv1iizp843fd39rf1qfh7b9mllbn5w8w4hd658w";
+  };
+
+  cargoSha256 = "0mj45svb0nly3cl5d1fmm7nh2zswxpgb56g9xnb4cks5186sn5fi";
+
+  meta = with stdenv.lib; {
+    homepage = https://github.com/shssoichiro/oxipng;
+    description = "A lossless PNG compression optimizer";
+    license = licenses.mit;
+    platforms = platforms.all;
+  };
+}
diff --git a/pkgs/tools/graphics/pngquant/default.nix b/pkgs/tools/graphics/pngquant/default.nix
index 992e66965f8d..b53a07bcfadf 100644
--- a/pkgs/tools/graphics/pngquant/default.nix
+++ b/pkgs/tools/graphics/pngquant/default.nix
@@ -2,12 +2,12 @@
 
 stdenv.mkDerivation rec {
   name = "pngquant-${version}";
-  version = "2.9.1";
+  version = "2.11.7";
 
   src = fetchgit {
     url = "https://www.github.com/pornel/pngquant.git";
     rev = "refs/tags/${version}";
-    sha256 = "0xhnrjsk55jy5q68f81y7l61c6x18i4fzkm3i4dgndrhri5g4n1q";
+    sha256 = "1qr5qr2wznzp0v9xwyz4r3982rcm9kys913w8gwmv7qd1akvx2qh";
     fetchSubmodules = true;
   };
 
diff --git a/pkgs/tools/graphics/vips/default.nix b/pkgs/tools/graphics/vips/default.nix
index 4fb16b497176..c50d7ec8fad9 100644
--- a/pkgs/tools/graphics/vips/default.nix
+++ b/pkgs/tools/graphics/vips/default.nix
@@ -1,20 +1,22 @@
-{ stdenv, fetchurl, pkgconfig, glib, libxml2, flex, bison, vips,
+{ stdenv, fetchurl, pkgconfig, glib, libxml2, flex, bison, vips, expat,
   fftw, orc, lcms, imagemagick, openexr, libtiff, libjpeg, libgsf, libexif,
   python27, libpng, matio ? null, cfitsio ? null, libwebp ? null
 }:
 
 stdenv.mkDerivation rec {
-  name = "vips-8.3.1";
+  name = "vips-${version}";
+  version = "8.6.2";
 
   src = fetchurl {
-    url = "http://www.vips.ecs.soton.ac.uk/supported/current/${name}.tar.gz";
-    sha256 = "01hh1baar2r474kny24fcq6ddshcvq104207mqxnkis0as6pzjq9";
+    url = "https://github.com/jcupitt/libvips/releases/download/v${version}/${name}.tar.gz";
+    sha256 = "18hjwk000w49yjjb41qrk4s39mr1xccisrvwy2x063vyjbdbr1ll";
   };
 
   buildInputs =
     [ pkgconfig glib libxml2 fftw orc lcms
       imagemagick openexr libtiff libjpeg
       libgsf libexif python27 libpng
+      expat
     ];
 
   meta = with stdenv.lib; {
diff --git a/pkgs/tools/inputmethods/fcitx-engines/fcitx-table-other/default.nix b/pkgs/tools/inputmethods/fcitx-engines/fcitx-table-other/default.nix
index 227e17347c1f..929cdb30b919 100644
--- a/pkgs/tools/inputmethods/fcitx-engines/fcitx-table-other/default.nix
+++ b/pkgs/tools/inputmethods/fcitx-engines/fcitx-table-other/default.nix
@@ -1,22 +1,16 @@
-{ stdenv, fetchurl, fetchpatch, cmake, fcitx, gettext }:
+{ stdenv, fetchurl, cmake, fcitx, gettext }:
 
 stdenv.mkDerivation rec {
   name = "fcitx-table-other-${version}";
-  version = "0.2.3";
+  version = "0.2.4";
 
   src = fetchurl {
     url = "http://download.fcitx-im.org/fcitx-table-other/${name}.tar.xz";
-    sha256 = "12fqbsjrpx5pndx2jf7fksrlp01a4yxz62h2vpxrbkpk73ljly4v";
+    sha256 = "1di60lr6l5k2sdwi3yrc0hl89j2k0yipayrsn803vd040w1fgfhq";
   };
 
   buildInputs = [ cmake fcitx gettext ];
 
-  patches = [
-    (fetchpatch { url = https://sources.debian.net/data/main/f/fcitx-table-other/0.2.3-3/debian/patches/0001-table-other-fix-build.patch;
-                  sha256 = "06n1df9szfgfjm5al8r1mvp4cib5h0cm601kwngl6k1vqyyjzg1j";
-                })
-  ];
-
   preInstall = ''
    substituteInPlace tables/cmake_install.cmake \
       --replace ${fcitx} $out
diff --git a/pkgs/tools/inputmethods/interception-tools/default.nix b/pkgs/tools/inputmethods/interception-tools/default.nix
index 77ac02649ad3..33fea9705acd 100644
--- a/pkgs/tools/inputmethods/interception-tools/default.nix
+++ b/pkgs/tools/inputmethods/interception-tools/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, fetchFromGitHub, pkgconfig, cmake, libyamlcppWithoutBoost,
+{ stdenv, fetchurl, fetchFromGitHub, pkgconfig, cmake, libyamlcpp,
   libevdev, libudev }:
 
 let
@@ -12,8 +12,8 @@ in stdenv.mkDerivation {
     sha256 = "14g4pphvylqdb922va322z1pbp12ap753hcf7zf9sii1ikvif83j";
   };
 
-  nativeBuildInputs = [ pkgconfig ];
-  buildInputs = [ cmake libevdev libudev libyamlcppWithoutBoost ];
+  nativeBuildInputs = [ cmake pkgconfig ];
+  buildInputs = [ libevdev libudev libyamlcpp ];
 
   prePatch = ''
     substituteInPlace CMakeLists.txt --replace \
diff --git a/pkgs/tools/misc/autojump/default.nix b/pkgs/tools/misc/autojump/default.nix
index 817510bfb761..ba38a55dda02 100644
--- a/pkgs/tools/misc/autojump/default.nix
+++ b/pkgs/tools/misc/autojump/default.nix
@@ -22,6 +22,9 @@ in
       mkdir -p "$out/etc/bash_completion.d"
       cp -v $out/share/autojump/autojump.bash "$out/etc/bash_completion.d"
 
+      mkdir -p $out/share/fish/vendor_completions.d/
+      cp -v $out/share/autojump/autojump.fish "$out/share/fish/vendor_completions.d/autojump.fish"
+
       cat <<SCRIPT > $out/bin/autojump-share
       #!/bin/sh
       # Run this script to find the autojump shared folder where all the shell
diff --git a/pkgs/tools/misc/autorandr/default.nix b/pkgs/tools/misc/autorandr/default.nix
index 405eb29f6bf9..db2e1fc622fa 100644
--- a/pkgs/tools/misc/autorandr/default.nix
+++ b/pkgs/tools/misc/autorandr/default.nix
@@ -2,19 +2,23 @@
 , python3Packages
 , fetchFromGitHub
 , systemd
-, xrandr
-, makeWrapper }:
+, xrandr }:
 
 let
   python = python3Packages.python;
-  wrapPython = python3Packages.wrapPython;
-  version = "1.1";
+  version = "1.4";
 in
   stdenv.mkDerivation {
     name = "autorandr-${version}";
 
     buildInputs = [ python ];
-    nativeBuildInputs = [ makeWrapper ];
+
+    # no wrapper, as autorandr --batch does os.environ.clear()
+    buildPhase = ''
+      substituteInPlace autorandr.py \
+        --replace 'os.popen("xrandr' 'os.popen("${xrandr}/bin/xrandr' \
+        --replace '["xrandr"]' '["${xrandr}/bin/xrandr"]'
+    '';
 
     installPhase = ''
       runHook preInstall
@@ -40,16 +44,11 @@ in
       runHook postInstall
     '';
 
-    postFixup = ''
-      wrapProgram $out/bin/autorandr \
-        --prefix PATH : ${xrandr}/bin
-    '';
-
     src = fetchFromGitHub {
       owner = "phillipberndt";
       repo = "autorandr";
       rev = "${version}";
-      sha256 = "05jlzxlrdyd4j90srr71fv91c2hf32diw40n9rmybgcdvy45kygd";
+      sha256 = "08i71r221ilc8k1c59w89g3iq5m7zwhnjjzapavhqxlr8y9dcpf5";
     };
 
     meta = {
diff --git a/pkgs/tools/misc/bcunit/default.nix b/pkgs/tools/misc/bcunit/default.nix
index b1ca28a7ca9d..1c681d4986d7 100644
--- a/pkgs/tools/misc/bcunit/default.nix
+++ b/pkgs/tools/misc/bcunit/default.nix
@@ -2,13 +2,13 @@
 stdenv.mkDerivation rec {
   name = "${baseName}-${version}";
   baseName = "bcunit";
-  version = "3.0";
+  version = "3.0.2";
   buildInputs = [cmake];
   src = fetchFromGitHub {
     owner = "BelledonneCommunications";
     repo = "${baseName}";
     rev = "${version}";
-    sha256 = "1kdq9w8i3nypfz7d43rmv1csqrqpip9p8xfa7vyp52aqkmhrby9l";
+    sha256 = "063yl7kxkix76r49qrj0h1qpz2p538d1yw8aih0x4i47g35k00y7";
   };
 
   meta = {
diff --git a/pkgs/tools/misc/cloc/default.nix b/pkgs/tools/misc/cloc/default.nix
index a1c04f06d144..97c0251d9d64 100644
--- a/pkgs/tools/misc/cloc/default.nix
+++ b/pkgs/tools/misc/cloc/default.nix
@@ -1,21 +1,25 @@
-{ stdenv, fetchFromGitHub, makeWrapper, perl, AlgorithmDiff, RegexpCommon }:
+{ stdenv, fetchFromGitHub, makeWrapper, perl
+, AlgorithmDiff, ParallelForkManager, RegexpCommon
+}:
 
 stdenv.mkDerivation rec {
   name = "cloc-${version}";
-  version = "1.74";
+  version = "1.76";
 
   src = fetchFromGitHub {
     owner = "AlDanial";
     repo = "cloc";
-    rev = version;
-    sha256 = "1ihma4f6f92jp1mvzr4rjrgyh9m5wzrlxngaxfn7g0a8r2kyi65b";
+    rev = "v${version}";
+    sha256 = "03z4ar959ximsddd92zchi013lh82ganzisk309y3b09q10hl9k7";
   };
 
   setSourceRoot = ''
     sourceRoot=$(echo */Unix)
   '';
 
-  buildInputs = [ makeWrapper perl AlgorithmDiff RegexpCommon ];
+  buildInputs = [
+    makeWrapper perl AlgorithmDiff ParallelForkManager RegexpCommon
+  ];
 
   makeFlags = [ "prefix=" "DESTDIR=$(out)" "INSTALL=install" ];
 
diff --git a/pkgs/tools/misc/ddccontrol/default.nix b/pkgs/tools/misc/ddccontrol/default.nix
index 45995f02c689..b03a286d2022 100644
--- a/pkgs/tools/misc/ddccontrol/default.nix
+++ b/pkgs/tools/misc/ddccontrol/default.nix
@@ -1,9 +1,10 @@
 { stdenv, fetchurl, autoreconfHook, intltool, perl, perlPackages, libxml2
 , pciutils, pkgconfig, gtk2, ddccontrol-db
+, makeDesktopItem
 }:
 
 let version = "0.4.2"; in
-stdenv.mkDerivation {
+stdenv.mkDerivation rec {
   name = "ddccontrol-${version}";
 
   src = fetchurl {
@@ -32,6 +33,24 @@ stdenv.mkDerivation {
       sed -e "s/chmod 4711/chmod 0711/" -i src/ddcpci/Makefile*
   '';
 
+  postInstall = ''
+    mkdir -p $out/share/applications/
+    cp $desktopItem/share/applications/* $out/share/applications/
+    for entry in $out/share/applications/*.desktop; do
+      substituteAllInPlace $entry
+    done
+  '';
+
+  desktopItem = makeDesktopItem {
+    name = "gddccontrol";
+    desktopName = "gddccontrol";
+    genericName = "DDC/CI control";
+    comment = meta.description;
+    exec = "@out@/bin/gddccontrol";
+    icon = "gddccontrol";
+    categories = "Settings;HardwareSettings;";
+  };
+
   meta = with stdenv.lib; {
     description = "A program used to control monitor parameters by software";
     homepage = http://ddccontrol.sourceforge.net/;
diff --git a/pkgs/tools/misc/edid-decode/default.nix b/pkgs/tools/misc/edid-decode/default.nix
new file mode 100644
index 000000000000..e4968b12e6cc
--- /dev/null
+++ b/pkgs/tools/misc/edid-decode/default.nix
@@ -0,0 +1,26 @@
+{ stdenv, fetchgit }:
+let
+  version = "2017-09-18";
+in stdenv.mkDerivation rec {
+  name = "edid-decode-unstable-${version}";
+
+  src = fetchgit {
+    url = "git://anongit.freedesktop.org/xorg/app/edid-decode";
+    rev = "f56f329ed23a25d002352dedba1e8f092a47286f";
+    sha256 = "1qzaq342dsdid0d99y7kj60p6bzgp2zjsmspyckddc68mmz4cs9n";
+  };
+
+  installPhase = ''
+    mkdir -p $out/bin
+    cp edid-decode $out/bin
+  '';
+
+  meta = {
+    description = "EDID decoder and conformance tester";
+    homepage = http://cgit.freedesktop.org/xorg/app/edid-decode/;
+    license = stdenv.lib.licenses.mit;
+    maintainers = [ stdenv.lib.maintainers.chiiruno ];
+    platforms = stdenv.lib.platforms.all;
+  };
+}
+
diff --git a/pkgs/tools/misc/fd/default.nix b/pkgs/tools/misc/fd/default.nix
index 2681d14665cb..3c8262068693 100644
--- a/pkgs/tools/misc/fd/default.nix
+++ b/pkgs/tools/misc/fd/default.nix
@@ -2,13 +2,13 @@
 
 rustPlatform.buildRustPackage rec {
   name = "fd-${version}";
-  version = "6.2.0";
+  version = "6.3.0";
 
   src = fetchFromGitHub {
     owner = "sharkdp";
     repo = "fd";
     rev = "v${version}";
-    sha256 = "1l1p7jlrryd54jwwrwgvs4njr3r59m8xsh31z7db0bzpw3dk7n5k";
+    sha256 = "1q666k7rssjd2cbkm8bm2gsn5shlkh756qpam53kibi5ahrwa7dc";
   };
 
   cargoSha256 = "1dikix9d46f0ydi81ray2vdvsy6y326w8ql6c89zx0p9cjm8m83r";
@@ -17,9 +17,9 @@ rustPlatform.buildRustPackage rec {
     mkdir -p "$out/man/man1"
     cp "$src/doc/fd.1" "$out/man/man1"
 
-    mkdir -p "$out/share/"{bash-completion/completions,fish/completions,zsh/site-functions}
+    mkdir -p "$out/share/"{bash-completion/completions,fish/vendor_completions.d,zsh/site-functions}
     cp target/release/build/fd-find-*/out/fd.bash "$out/share/bash-completion/completions/"
-    cp target/release/build/fd-find-*/out/fd.fish "$out/share/fish/completions/"
+    cp target/release/build/fd-find-*/out/fd.fish "$out/share/fish/vendor_completions.d/"
     cp target/release/build/fd-find-*/out/_fd "$out/share/zsh/site-functions/"
   '';
 
@@ -33,6 +33,7 @@ rustPlatform.buildRustPackage rec {
     '';
     homepage = "https://github.com/sharkdp/fd";
     license = with licenses; [ asl20 /* or */ mit ];
+    maintainers = with maintainers; [ dywedir ];
     platforms = platforms.all;
   };
 }
diff --git a/pkgs/tools/misc/figlet/default.nix b/pkgs/tools/misc/figlet/default.nix
index f68ae1ec2455..86434847b4a2 100644
--- a/pkgs/tools/misc/figlet/default.nix
+++ b/pkgs/tools/misc/figlet/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl }:
+{ stdenv, fetchurl, fetchpatch }:
 
 stdenv.mkDerivation {
   name = "figlet-2.2.5";
@@ -9,12 +9,17 @@ stdenv.mkDerivation {
     sha256 = "0za1ax15x7myjl8jz271ybly8ln9kb9zhm1gf6rdlxzhs07w925z";
   };
 
-  installPhase = "make prefix=$out install";
+  patches = [
+    (fetchpatch {
+      url = https://git.alpinelinux.org/cgit/aports/plain/main/figlet/musl-fix-cplusplus-decls.patch?h=3.4-stable&id=71776c73a6f04b6f671430f702bcd40b29d48399;
+      name = "musl-fix-cplusplus-decls.patch";
+      sha256 = "1720zgrfk9makznqkbjrnlxm7nnhk6zx7g458fv53337n3g3zn7j";
+    })
+  ];
 
-  preConfigure = ''
-    mkdir -p $out/{man/man6,bin}
-    makeFlags="DESTDIR=$out/bin MANDIR=$out/man/man6 DEFAULTFONTDIR=$out/share/figlet CC=cc LD=cc"
-  '';
+  makeFlags = [ "prefix=$(out)" "CC:=$(CC)" "LD:=$(CC)" ];
+
+  doCheck = true;
 
   meta = {
     description = "Program for making large letters out of ordinary text";
diff --git a/pkgs/tools/misc/findutils/default.nix b/pkgs/tools/misc/findutils/default.nix
index 4eef3f7a9d59..f79720289bf5 100644
--- a/pkgs/tools/misc/findutils/default.nix
+++ b/pkgs/tools/misc/findutils/default.nix
@@ -21,6 +21,7 @@ stdenv.mkDerivation rec {
   doCheck
     =  !hostPlatform.isDarwin
     && !(hostPlatform.libc == "glibc" && hostPlatform.isi686)
+    && (hostPlatform.libc != "musl")
     && hostPlatform == buildPlatform;
 
   outputs = [ "out" "info" ];
diff --git a/pkgs/tools/misc/geteltorito/default.nix b/pkgs/tools/misc/geteltorito/default.nix
index 7336665594a7..b95c7179141d 100644
--- a/pkgs/tools/misc/geteltorito/default.nix
+++ b/pkgs/tools/misc/geteltorito/default.nix
@@ -41,7 +41,7 @@ stdenv.mkDerivation rec {
   meta = with stdenv.lib; {
     description = "Extract the initial/default boot image from a CD image if existent";
     homepage = https://userpages.uni-koblenz.de/~krienke/ftp/noarch/geteltorito/;
-    maintainers = [ maintainers.profpatsch ];
+    maintainers = [ maintainers.Profpatsch ];
     license = licenses.gpl2;
   };
 
diff --git a/pkgs/tools/misc/hyperfine/default.nix b/pkgs/tools/misc/hyperfine/default.nix
new file mode 100644
index 000000000000..322151739843
--- /dev/null
+++ b/pkgs/tools/misc/hyperfine/default.nix
@@ -0,0 +1,25 @@
+{ stdenv, fetchFromGitHub, rustPlatform }:
+
+with rustPlatform;
+
+buildRustPackage rec {
+  name = "hyperfine-${version}";
+  version = "0.4.0";
+
+  src = fetchFromGitHub {
+    owner  = "sharkdp";
+    repo   = "hyperfine";
+    rev    = "refs/tags/v${version}";
+    sha256 = "1ynqyacbx0x971lyd1k406asms58bc7vzl8gca3sg34rx0hx3wzi";
+  };
+
+  cargoSha256 = "109yv1618bi19vh1jjv2ki06mafhcrv35a3a1zsr34kg3gsjv0rb";
+
+  meta = with stdenv.lib; {
+    description = "Command-line benchmarking tool";
+    homepage    = https://github.com/sharkdp/hyperfine;
+    license     = with licenses; [ asl20 /* or */ mit ];
+    maintainers = [ maintainers.thoughtpolice ];
+    platforms   = platforms.all;
+  };
+}
diff --git a/pkgs/tools/misc/ipxe/default.nix b/pkgs/tools/misc/ipxe/default.nix
index 2d36ad17eec7..786b3992a5cc 100644
--- a/pkgs/tools/misc/ipxe/default.nix
+++ b/pkgs/tools/misc/ipxe/default.nix
@@ -1,4 +1,6 @@
-{ stdenv, fetchgit, perl, cdrkit, syslinux, xz, openssl }:
+{ stdenv, lib, fetchgit, perl, cdrkit, syslinux, xz, openssl
+, embedScript ? null
+}:
 
 let
   date = "20170922";
@@ -24,7 +26,7 @@ stdenv.mkDerivation {
   makeFlags =
     [ "ECHO_E_BIN_ECHO=echo" "ECHO_E_BIN_ECHO_E=echo" # No /bin/echo here.
       "ISOLINUX_BIN_LIST=${syslinux}/share/syslinux/isolinux.bin"
-    ];
+    ] ++ lib.optional (embedScript != null) "EMBED=${embedScript}";
 
 
   enabledOptions = [ "DOWNLOAD_PROTO_HTTPS" ];
@@ -46,6 +48,8 @@ stdenv.mkDerivation {
     ln -s undionly.kpxe $out/undionly.kpxe.0
   '';
 
+  enableParallelBuilding = true;
+
   meta = with stdenv.lib;
     { description = "Network boot firmware";
       homepage = http://ipxe.org/;
diff --git a/pkgs/tools/misc/less/default.nix b/pkgs/tools/misc/less/default.nix
index 2907af43a296..57eeb39f5431 100644
--- a/pkgs/tools/misc/less/default.nix
+++ b/pkgs/tools/misc/less/default.nix
@@ -1,11 +1,11 @@
 { stdenv, fetchurl, ncurses, lessSecure ? false }:
 
 stdenv.mkDerivation rec {
-  name = "less-529";
+  name = "less-530";
 
   src = fetchurl {
     url = "http://www.greenwoodsoftware.com/less/${name}.tar.gz";
-    sha256 = "02wspzv90cki8936m50qxk0vrribvwwqlva21nyvfx41qga2r96v";
+    sha256 = "1qpj2z38c53qmvqn8jaa0kq26q989cfbfjj4y0s6z17l1amr2gsh";
   };
 
   configureFlags = [ "--sysconfdir=/etc" ] # Look for ‘sysless’ in /etc.
diff --git a/pkgs/tools/misc/man-db/default.nix b/pkgs/tools/misc/man-db/default.nix
index d0cb9a223366..eadb736aeeb2 100644
--- a/pkgs/tools/misc/man-db/default.nix
+++ b/pkgs/tools/misc/man-db/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, pkgconfig, libpipeline, db, groff, makeWrapper }:
+{ stdenv, fetchurl, pkgconfig, libpipeline, db, groff, libiconv, makeWrapper, buildPackages }:
 
 stdenv.mkDerivation rec {
   name = "man-db-2.7.5";
@@ -11,8 +11,10 @@ stdenv.mkDerivation rec {
   outputs = [ "out" "doc" ];
   outputMan = "out"; # users will want `man man` to work
 
-  nativeBuildInputs = [ pkgconfig makeWrapper ];
-  buildInputs = [ libpipeline db groff ];
+  nativeBuildInputs = [ pkgconfig makeWrapper groff ]
+    ++ stdenv.lib.optionals doCheck checkInputs;
+  buildInputs = [ libpipeline db groff ]; # (Yes, 'groff' is both native and build input)
+  checkInputs = [ libiconv /* for 'iconv' binary */ ];
 
   postPatch = ''
     substituteInPlace src/man_db.conf.in \
@@ -41,6 +43,18 @@ stdenv.mkDerivation rec {
     done
   '';
 
+  postFixup = stdenv.lib.optionalString (buildPackages.groff != groff) ''
+    # Check to make sure none of the outputs depend on build-time-only groff:
+    for outName in $outputs; do
+      out=''${!outName}
+      echo "Checking $outName(=$out) for references to build-time groff..."
+      if grep -r '${buildPackages.groff}' $out; then
+        echo "Found an erroneous dependency on groff ^^^" >&2
+        exit 1
+      fi
+    done
+  '';
+
   enableParallelBuilding = true;
 
   doCheck = true;
diff --git a/pkgs/tools/misc/massren/default.nix b/pkgs/tools/misc/massren/default.nix
new file mode 100644
index 000000000000..085e6f41a091
--- /dev/null
+++ b/pkgs/tools/misc/massren/default.nix
@@ -0,0 +1,22 @@
+{ stdenv, lib, buildGoPackage, fetchFromGitHub }:
+
+buildGoPackage rec {
+  name = "massren-${version}";
+  version = "1.5.4";
+
+  src = fetchFromGitHub {
+    owner = "laurent22";
+    repo = "massren";
+    rev = "v${version}";
+    sha256 = "1bn6qy30kpxi3rkr3bplsc80xnhj0hgfl0qaczbg3zmykfmsl3bl";
+  };
+
+  goPackagePath = "github.com/laurent22/massren";
+
+  meta = with lib; {
+    description = "Easily rename multiple files using your text editor";
+    license = licenses.mit;
+    homepage = https://github.com/laurent22/massren;
+    maintainers = with maintainers; [ andrew-d ];
+  };
+}
diff --git a/pkgs/tools/misc/ministat/default.nix b/pkgs/tools/misc/ministat/default.nix
new file mode 100644
index 000000000000..7b9549a80fea
--- /dev/null
+++ b/pkgs/tools/misc/ministat/default.nix
@@ -0,0 +1,31 @@
+{ stdenv, fetchgit }:
+
+stdenv.mkDerivation rec {
+  name = "ministat-${version}";
+  version = "20150715-1";
+
+  src = fetchgit {
+    url = "https://git.decadent.org.uk/git/ministat.git";
+    rev = "refs/tags/debian/${version}";
+    sha256 = "1p4g0yqgsy4hiqhr8gqp8d38zxzrss5qz70s0bw3i2pg4w668k6f";
+  };
+
+  postPatch = ''
+    patch -p1 < debian/patches/fix-ctype-usage.patch
+    patch -p1 < debian/patches/not-bsd
+  '';
+
+  installPhase = ''
+    mkdir -p $out/bin $out/share/man/man1
+    cp ministat $out/bin
+    cp ministat.1 $out/share/man/man1/
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Simple tool for statistical comparison of data sets";
+    homepage = https://git.decadent.org.uk/gitweb/?p=ministat.git;
+    license = licenses.beerware;
+    maintainers = [ maintainers.dezgeg ];
+    platforms = platforms.linux;
+  };
+}
diff --git a/pkgs/tools/misc/mktorrent/default.nix b/pkgs/tools/misc/mktorrent/default.nix
index 0e1d3b8f49f3..6f56267ebf72 100644
--- a/pkgs/tools/misc/mktorrent/default.nix
+++ b/pkgs/tools/misc/mktorrent/default.nix
@@ -25,6 +25,6 @@ stdenv.mkDerivation rec {
     homepage = http://mktorrent.sourceforge.net/;
     license = stdenv.lib.licenses.gpl2Plus;
     description = "Command line utility to create BitTorrent metainfo files";
-    maintainers = with stdenv.lib.maintainers; [viric profpatsch];
+    maintainers = with stdenv.lib.maintainers; [viric Profpatsch];
   };
 }
diff --git a/pkgs/tools/misc/mongodb-tools/default.nix b/pkgs/tools/misc/mongodb-tools/default.nix
index 7e24c955a806..a728450d76e5 100644
--- a/pkgs/tools/misc/mongodb-tools/default.nix
+++ b/pkgs/tools/misc/mongodb-tools/default.nix
@@ -3,7 +3,7 @@
 let
   tools = [
     "bsondump" "mongodump" "mongoexport" "mongofiles" "mongoimport"
-    "mongooplog" "mongorestore" "mongostat" "mongotop"
+    "mongoreplay" "mongorestore" "mongostat" "mongotop"
   ];
 in
 
@@ -11,7 +11,7 @@ with stdenv.lib;
 
 buildGoPackage rec {
   name = "mongo-tools-${version}";
-  version = "3.5.13";
+  version = "3.7.2";
   rev = "r${version}";
 
   goPackagePath = "github.com/mongodb/mongo-tools";
@@ -21,17 +21,18 @@ buildGoPackage rec {
     inherit rev;
     owner = "mongodb";
     repo = "mongo-tools";
-    sha256 = "00klm4pyx5k39nn4pmfrpnkqxdhbzm7lprgwxszpirzrarh2g164";
+    sha256 = "1y5hd4qw7422sqkj8vmy4agscvin3ck54r515bjrzn69iw73nhfl";
   };
 
-  goDeps = ./deps.nix;
-
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ openssl_1_0_2 libpcap ];
 
   # Mongodb incorrectly names all of their binaries main
   # Let's work around this with our own installer
   buildPhase = ''
+    # move vendored codes so nixpkgs go builder could find it
+    mv go/src/github.com/mongodb/mongo-tools/vendor/src/* go/src/github.com/mongodb/mongo-tools/vendor/
+
     runHook preBuild
     ${stdenv.lib.concatMapStrings (t: ''
       go build -o "$bin/bin/${t}" -tags ssl -ldflags "-s -w" $goPackagePath/${t}/main
diff --git a/pkgs/tools/misc/mongodb-tools/deps.nix b/pkgs/tools/misc/mongodb-tools/deps.nix
deleted file mode 100644
index 30de006db6f7..000000000000
--- a/pkgs/tools/misc/mongodb-tools/deps.nix
+++ /dev/null
@@ -1,182 +0,0 @@
-[
-  {
-    goPackagePath = "golang.org/x/sys";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/sys";
-      rev = "314a259e304ff91bd6985da2a7149bbf91237993";
-      sha256 = "0vya62c3kmhmqx6awlxx8hc84987xkym9rhs0q28vlhwk9kczdaa";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/crypto";
-    fetch = {
-      type = "git";
-      url = "https://github.com/golang/crypto";
-      rev = "1f22c0103821b9390939b6776727195525381532";
-      sha256 = "1acy12f396sr3lrnbcnym5q72qnlign5bagving41qijzjnc219m";
-    };
-  }
-  {
-    goPackagePath = "github.com/howeyc/gopass";
-    fetch = {
-      type = "git";
-      url = "https://github.com/howeyc/gopass";
-      rev = "bf9dde6d0d2c004a008c27aaee91170c786f6db8";
-      sha256 = "1jxzyfnqi0h1fzlsvlkn10bncic803bfhslyijcxk55mgh297g45";
-    };
-  }
-  {
-    goPackagePath = "gopkg.in/mgo.v2";
-    fetch = {
-      type = "git";
-      url = "https://github.com/10gen/mgo";
-      rev = "39b4000d99037e917f3a3b9d2dcab667a9ef284a";
-      sha256 = "1m0xgd3y32g15fhl204g2caarfi5rn41m8pyym0i2gl3jnv5zw99";
-    };
-  }
-  {
-    goPackagePath = "github.com/google/gopacket";
-    fetch = {
-      type = "git";
-      url = "https://github.com/google/gopacket";
-      rev = "93b782132903d1846aab74cb1f62e6138564949f";
-      sha256 = "0l5m5a8dnqbkhphyfq7anj5zv59s74q2l7i6w9r7xwysfiqyq335";
-    };
-  }
-  {
-    goPackagePath = "github.com/patrickmn/go-cache";
-    fetch = {
-      type = "git";
-      url = "https://github.com/patrickmn/go-cache";
-      rev = "1881a9bccb818787f68c52bfba648c6cf34c34fa";
-      sha256 = "1nd0kqijx6mrxb8wlh20bx73mwj0fqzla2sr68y6j6lz3fsy1fw2";
-    };
-  }
-  {
-    goPackagePath = "github.com/spacemonkeygo/openssl";
-    fetch = {
-      type = "git";
-      url = "https://github.com/10gen/openssl";
-      rev = "2692b9f6fa95e72c75f8d9ba76e49c5dfd2cf8e4";
-      sha256 = "16x2mx51977jrqw8d9hqhqmx892v2qf1k5xb01hhfklh58f527k2";
-    };
-  }
-  {
-    goPackagePath = "github.com/jtolds/gls";
-    fetch = {
-      type = "git";
-      url = "https://github.com/jtolds/gls";
-      rev = "8ddce2a84170772b95dd5d576c48d517b22cac63";
-      sha256 = "11rp9wbzkd71640rq0nwmgsddskx3qac8wzqz71ksdb7ixjj5fmj";
-    };
-  }
-  {
-    goPackagePath = "github.com/spacemonkeygo/spacelog";
-    fetch = {
-      type = "git";
-      url = "https://github.com/spacemonkeygo/spacelog";
-      rev = "f936fb050dc6b5fe4a96b485a6f069e8bdc59aeb";
-      sha256 = "00an6zlhjk5l0vk1zjzshhswsd0h4syi48n50hv0fcnbmpxc5hv2";
-    };
-  }
-  {
-    goPackagePath = "gopkg.in/tomb.v2";
-    fetch = {
-      type = "git";
-      url = "https://gopkg.in/tomb.v2";
-      rev = "14b3d72120e8d10ea6e6b7f87f7175734b1faab8";
-      sha256 = "1nza31jvkpka5431c4bdbirvjdy36b1b55sbzljqhqih25jrcjx5";
-    };
-  }
-  {
-    goPackagePath = "github.com/jtolds/gls";
-    fetch = {
-      type = "git";
-      url = "https://github.com/jtolds/gls";
-      rev = "8ddce2a84170772b95dd5d576c48d517b22cac63";
-      sha256 = "11rp9wbzkd71640rq0nwmgsddskx3qac8wzqz71ksdb7ixjj5fmj";
-    };
-  }
-  {
-    goPackagePath = "github.com/smartystreets/assertions";
-    fetch = {
-      type = "git";
-      url = "https://github.com/smartystreets/assertions";
-      rev = "287b4346dc4e71a038c346375a9d572453bc469b";
-      sha256 = "1nw9j9aircra68lbkp5bq4l8ayq4g3fvbb2x8qd2hg0vwgn5yaij";
-    };
-  }
-  {
-    goPackagePath = "github.com/smartystreets/goconvey";
-    fetch = {
-      type = "git";
-      url = "https://github.com/smartystreets/goconvey";
-      rev = "bf58a9a1291224109919756b4dcc469c670cc7e4";
-      sha256 = "1k8k6vvlpl5a19dbrywxjmcia36macjbajx2hb6ci64rdfyf5kz5";
-    };
-  }
-  {
-    goPackagePath = "github.com/jacobsa/oglematchers";
-    fetch = {
-      type = "git";
-      url = "https://github.com/jacobsa/oglematchers";
-      rev = "3ecefc49db07722beca986d9bb71ddd026b133f0";
-      sha256 = "0vrk5sfs1ymkg0gv5n5dn9x0kqiaw8gaapljj8q75mgrr1p5149y";
-    };
-  }
-  {
-    goPackagePath = "github.com/3rf/mongo-lint";
-    fetch = {
-      type = "git";
-      url = "https://github.com/3rf/mongo-lint";
-      rev = "3550fdcf1f43b89aaeabaa4559eaae6dc4407e42";
-      sha256 = "19b60a3i6kzssd15dg57y4bg49sw41idrsjdi8vr4j5lr5d7gviv";
-    };
-  }
-  {
-    goPackagePath = "github.com/mattn/go-runewidth";
-    fetch = {
-      type = "git";
-      url = "https://github.com/mattn/go-runewidth";
-      rev = "d6bea18f789704b5f83375793155289da36a3c7f";
-      sha256 = "1hnigpn7rjbwd1ircxkyx9hvi0xmxr32b2jdy2jzw6b3jmcnz1fs";
-    };
-  }
-  {
-    goPackagePath = "github.com/10gen/escaper";
-    fetch = {
-      type = "git";
-      url = "https://github.com/10gen/escaper";
-      rev = "17fe61c658dcbdcbf246c783f4f7dc97efde3a8b";
-      sha256 = "1iw86lg8ad5gdm46ryf4v431ix834l52lrjvcahq3c4dw1ylnbvl";
-    };
-  }
-  {
-    goPackagePath = "github.com/golang/snappy";
-    fetch = {
-      type = "git";
-      url = "https://github.com/golang/snappy";
-      rev = "d9eb7a3d35ec988b8585d4a0068e462c27d28380";
-      sha256 = "0wynarlr1y8sm9y9l29pm9dgflxriiialpwn01066snzjxnpmbyn";
-    };
-  }
-  {
-    goPackagePath = "github.com/nsf/termbox-go";
-    fetch = {
-      type = "git";
-      url = "https://github.com/nsf/termbox-go";
-      rev = "0723e7c3d0a317dea811f0fbe4d6edd81908c971";
-      sha256 = "1ak35nhlgjpbpnh7v9qvjyfsq52liz3niqfqva76p7a68pblwbr7";
-    };
-  }
-  {
-    goPackagePath = "github.com/jessevdk/go-flags";
-    fetch = {
-      type = "git";
-      url = "https://github.com/jessevdk/go-flags";
-      rev = "97448c91aac742cbca3d020b3e769013a420a06f";
-      sha256 = "0fv3yxvq8m3639a279hq4pf0c52ngqfl5n1vklcfympndrb7zjzj";
-    };
-  }
-]
diff --git a/pkgs/tools/misc/mprime/default.nix b/pkgs/tools/misc/mprime/default.nix
index 3ef039507d4e..556d21ee2fc7 100644
--- a/pkgs/tools/misc/mprime/default.nix
+++ b/pkgs/tools/misc/mprime/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, unzip, pkgconfig, curl }:
+{ stdenv, lib, fetchurl, unzip, curl, hwloc, gmp }:
 
 let
   srcDir =
@@ -14,25 +14,24 @@ let
     else throwSystem;
 in
 
-stdenv.mkDerivation {
-  name = "mprime-28.7";
+stdenv.mkDerivation rec {
+  name = "mprime-${version}";
+  version = "29.4b7";
 
   src = fetchurl {
-    url = http://www.mersenne.org/ftp_root/gimps/p95v287.source.zip;
-    sha256 = "1k3gxhs3g8hfghzpmidhcwpwyayj8r83v8zjai1z4xgsql4jwby1";
+    url = "http://www.mersenne.org/ftp_root/gimps/p95v${lib.replaceStrings ["."] [""] version}.source.zip";
+    sha256 = "0idaqm46m4yis7vl014scx57lpccvjbnyy79gmj8caxghyajws0m";
   };
 
-  unpackCmd = "unzip -d src -q $curSrc";
+  unpackCmd = "unzip -d src -q $curSrc || true";
 
-  nativeBuildInputs = [ pkgconfig ];
-  buildInputs = [ unzip curl ];
+  nativeBuildInputs = [ unzip ];
+  buildInputs = [ curl hwloc gmp ];
 
   patches = [ ./makefile.patch ];
 
   buildPhase = ''
     make -C gwnum -f ${gwnum}
-    echo 'override CFLAGS := $(CFLAGS)' $(pkg-config --cflags libcurl) >> ${srcDir}/makefile
-    echo 'override LIBS := $(LIBS)' $(pkg-config --libs libcurl) >> ${srcDir}/makefile
     make -C ${srcDir}
   '';
 
@@ -48,7 +47,7 @@ stdenv.mkDerivation {
       client. It is identical to Prime95 in functionality, except it lacks a
       graphical user interface.
     '';
-    homepage = http://www.mersenne.org/;
+    homepage = "http://www.mersenne.org/";
     # Unfree, because of a license requirement to share prize money if you find
     # a suitable prime. http://www.mersenne.org/legal/#EULA
     license = stdenv.lib.licenses.unfree;
diff --git a/pkgs/tools/misc/mprime/makefile.patch b/pkgs/tools/misc/mprime/makefile.patch
index 7f758af7b7c4..6ed9cf69384d 100644
--- a/pkgs/tools/misc/mprime/makefile.patch
+++ b/pkgs/tools/misc/mprime/makefile.patch
@@ -1,46 +1,41 @@
-diff -ru orig/linux/makefile patched/linux/makefile
---- orig/linux/makefile	2015-08-09 21:06:18.000000000 +0100
-+++ patched/linux/makefile	2016-02-16 16:25:45.988662423 +0000
-@@ -25,8 +25,8 @@
+diff -dur src.old/linux/makefile src.new/linux/makefile
+--- src.old/linux/makefile	2018-01-04 20:49:00.000000000 +0300
++++ src.new/linux/makefile	2018-02-15 12:32:02.913011604 +0300
+@@ -28,8 +28,8 @@
  CPP = g++
  CPPFLAGS = -I.. -I../gwnum -O2 -march=i486 -malign-double
  
 -LFLAGS = -Wl,-M -Wl,-L/usr/local/lib
--LIBS = ../gwnum/gwnum.a ../gwnum/gwnum.ld -lm -lpthread -Wl,-Bstatic -lcurl -Wl,-Bdynamic -lrt -lstdc++ -ldl
+-LIBS = ../gwnum/gwnum.a ../gwnum/gwnum.ld -lm -lpthread -Wl,-Bstatic -lhwloc -Wl,-Bstatic -lcurl -Wl,-Bdynamic -lrt -lstdc++ -ldl -lgmp
 +LFLAGS =
-+LIBS = ../gwnum/gwnum.a ../gwnum/gwnum.ld -lm -lpthread -lrt -lstdc++ -ldl
++LIBS = ../gwnum/gwnum.a ../gwnum/gwnum.ld -lm -lpthread -lhwloc -lcurl -lrt -lstdc++ -ldl -lgmp
  
  FACTOROBJ = factor32.o
  LINUXOBJS = prime.o menu.o
-diff -ru orig/linux64/makefile patched/linux64/makefile
---- orig/linux64/makefile	2015-08-09 21:06:20.000000000 +0100
-+++ patched/linux64/makefile	2016-02-16 16:25:57.076531585 +0000
-@@ -13,13 +13,13 @@
- #	LIBS = ../gwnum/gwnum.a ../gwnum/gwnum.ld -lm -lpthread -Wl,-Bstatic $(shell pkg-config --static --libs libcurl) -lstdc++ -Wl,-Bdynamic -ldl
- 
- CC = gcc
--CFLAGS = -I.. -I../gwnum -I/usr/local/include -DX86_64 -O2 
-+CFLAGS = -I.. -I../gwnum -I/usr/local/include -DX86_64 -O2
- 
+diff -dur src.old/linux64/makefile src.new/linux64/makefile
+--- src.old/linux64/makefile	2018-01-04 20:49:00.000000000 +0300
++++ src.new/linux64/makefile	2018-02-15 12:32:28.836286995 +0300
+@@ -26,9 +26,9 @@
  CPP = g++
  CPPFLAGS = -I.. -I../gwnum -DX86_64 -O2
  
 -LFLAGS = -Wl,-M -Wl,-L/usr/local/lib
--LIBS = ../gwnum/gwnum.a ../gwnum/gwnum.ld -lm -lpthread -Wl,-Bstatic -lcurl -Wl,-Bdynamic -lrt -lstdc++ -ldl
 +LFLAGS =
-+LIBS = ../gwnum/gwnum.a ../gwnum/gwnum.ld -lm -lpthread -lrt -lstdc++ -ldl
+ #LIBS = ../gwnum/gwnum.a ../gwnum/gwnum.ld -lm -lpthread -Wl,-Bstatic -lhwloc -Wl,-Bstatic -lcurl -Wl,-Bdynamic -lrt -lstdc++ -lz -lxml2 -ldl -lgmp
+-LIBS = ../gwnum/gwnum.a ../gwnum/gwnum.ld -lm -lpthread -Wl,-Bstatic -lhwloc -Wl,-Bstatic -lcurl -Wl,-Bdynamic -lrt -lstdc++ -ldl -lgmp
++LIBS = ../gwnum/gwnum.a ../gwnum/gwnum.ld -lm -lpthread -lhwloc -lcurl -lrt -lstdc++ -ldl -lgmp
  
  FACTOROBJ = factor64.o
  LINUXOBJS = prime.o menu.o
-diff -ru orig/macosx64/makefile patched/macosx64/makefile
---- orig/macosx64/makefile	2015-08-09 21:06:22.000000000 +0100
-+++ patched/macosx64/makefile	2016-02-16 16:19:03.988415925 +0000
-@@ -10,7 +10,7 @@
+diff -dur src.old/macosx64/makefile src.new/macosx64/makefile
+--- src.old/macosx64/makefile	2018-01-04 20:49:02.000000000 +0300
++++ src.new/macosx64/makefile	2018-02-15 12:33:32.401902535 +0300
+@@ -12,7 +12,7 @@
+ CPP = g++
  CPPFLAGS = -I.. -I../gwnum -I../linux -O2 -DX86_64 -DCOMMAND_LINE_MPRIME -m64
  
- LFLAGS = -m64 -Wl,-no_pie
--LIBS   = ../gwnum/amd64/release/gwnum.a -lm -lpthread -lcurl -framework IOKit -framework CoreFoundation -lstdc++
-+LIBS   = ../gwnum/amd64/release/gwnum.a -lm -lpthread -framework IOKit -framework CoreFoundation -lstdc++
+-LFLAGS = -m64 -Wl,-no_pie -L/usr/local/lib
++LFLAGS = -m64 -Wl,-no_pie
+ LIBS   = ../gwnum/amd64/release/gwnum.a -lm -lpthread -lhwloc -lcurl -framework IOKit -framework CoreFoundation -lstdc++ -lgmp
  
  FACTOROBJ = ../prime95/macosx64/factor64.o
- OBJS = prime.o menu.o
diff --git a/pkgs/tools/misc/otfcc/default.nix b/pkgs/tools/misc/otfcc/default.nix
index 8e2ecdcd6bbb..052999033a1e 100644
--- a/pkgs/tools/misc/otfcc/default.nix
+++ b/pkgs/tools/misc/otfcc/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "otfcc-${version}";
-  version = "0.8.6";
+  version = "0.9.6";
 
   src = fetchFromGitHub {
     owner = "caryll";
     repo = "otfcc";
     rev = "v${version}";
-    sha256 = "0yy9awffxxs0cdlf0akld73ndnwmylxvplac4k6j7641m3vk1g8p";
+    sha256 = "1rnjfqqyc6d9nhlh8if9k37wk94mcwz4wf3k239v6idg48nrk10b";
   };
 
   nativeBuildInputs = [ premake5 ninja ];
diff --git a/pkgs/tools/misc/papis/default.nix b/pkgs/tools/misc/papis/default.nix
new file mode 100644
index 000000000000..de69712eb5ee
--- /dev/null
+++ b/pkgs/tools/misc/papis/default.nix
@@ -0,0 +1,44 @@
+{ buildPythonApplication, lib, fetchFromGitHub
+, argcomplete, arxiv2bib, beautifulsoup4, bibtexparser
+, configparser, habanero, papis-python-rofi, pylibgen
+, prompt_toolkit, pyparser, python_magic, pyyaml
+, requests, unidecode, urwid, vobject, tkinter
+, vim
+}:
+
+buildPythonApplication rec {
+  pname = "papis";
+  version = "0.5.2";
+
+  # Missing tests on Pypi
+  src = fetchFromGitHub {
+    owner = "alejandrogallo";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "0cw6ajdaknijka3j2bkkkn0bcxqifk825kq0a0rdbbmc6661pgxb";
+  };
+
+  postPatch = "sed -i 's/configparser>=3.0.0/# configparser>=3.0.0/' setup.py";
+
+  propagatedBuildInputs = [
+    argcomplete arxiv2bib beautifulsoup4 bibtexparser
+    configparser habanero papis-python-rofi pylibgen
+    prompt_toolkit pyparser python_magic pyyaml
+    requests unidecode urwid vobject tkinter
+    vim
+  ];
+
+  # Papis tries to create the config folder under $HOME during the tests
+  preCheck = ''
+    mkdir -p check-phase
+    export HOME=$(pwd)/check-phase
+  '';
+
+
+  meta = {
+    description = "Powerful command-line document and bibliography manager";
+    homepage = http://papis.readthedocs.io/en/latest/;
+    license = lib.licenses.gpl3;
+    maintainers = [ lib.maintainers.nico202 ];
+  };
+}
diff --git a/pkgs/tools/misc/plotinus/default.nix b/pkgs/tools/misc/plotinus/default.nix
new file mode 100644
index 000000000000..41913f966534
--- /dev/null
+++ b/pkgs/tools/misc/plotinus/default.nix
@@ -0,0 +1,44 @@
+{ stdenv
+, fetchFromGitHub
+, gettext
+, libxml2
+, pkgconfig
+, gtk3
+, cmake
+, ninja
+, vala
+, wrapGAppsHook }:
+
+stdenv.mkDerivation rec {
+  name = "plotinus-${version}";
+  version = "0.2.0";
+
+  src = fetchFromGitHub {
+    owner = "p-e-w";
+    repo = "plotinus";
+    rev = "v${version}";
+    sha256 = "19k6f6ivg4ab57m62g6fkg85q9sv049snmzq1fyqnqijggwshxfz";
+  };
+
+  nativeBuildInputs = [
+    pkgconfig
+    wrapGAppsHook
+    vala
+    cmake
+    ninja
+    gettext
+    libxml2
+  ];
+  buildInputs = [
+    gtk3
+  ];
+
+  meta = with stdenv.lib; {
+    description = "A searchable command palette in every modern GTK+ application";
+    homepage = https://github.com/p-e-w/plotinus;
+    maintainers = with maintainers; [ samdroid-apps ];
+    platforms = platforms.linux;
+    # No COPYING file, but headers in the source code
+    license = licenses.gpl3;
+  };
+}
diff --git a/pkgs/tools/misc/rename/default.nix b/pkgs/tools/misc/rename/default.nix
new file mode 100644
index 000000000000..e30c2e89349d
--- /dev/null
+++ b/pkgs/tools/misc/rename/default.nix
@@ -0,0 +1,18 @@
+{ stdenv, fetchFromGitHub, buildPerlPackage }:
+
+buildPerlPackage rec {
+  name = "rename-${version}";
+  version = "1.9";
+  src = fetchFromGitHub {
+    owner = "pstray";
+    repo = "rename";
+    rev = "d46f1d0ced25dc5849acb5d5974a3e2e9d97d536";
+    sha256 = "0qahs1cqfaci2hdf1xncrz4k0z5skkfr43apnm3kybs7za33apzw";
+  };
+  meta = with stdenv.lib; {
+    description = "Rename files according to a Perl rewrite expression";
+    homepage = http://search.cpan.org/~pederst/rename-1.9/bin/rename.PL;
+    maintainers = with maintainers; [ mkg ];
+    license = with licenses; [ gpl1Plus ];
+  };
+}
diff --git a/pkgs/tools/misc/roundup/default.nix b/pkgs/tools/misc/roundup/default.nix
new file mode 100644
index 000000000000..e24b1fce06ef
--- /dev/null
+++ b/pkgs/tools/misc/roundup/default.nix
@@ -0,0 +1,38 @@
+{ stdenv, fetchFromGitHub, ronn, shocco }:
+
+stdenv.mkDerivation rec {
+  name = "roundup-${version}";
+  version = "0.0.6";
+
+  src = fetchFromGitHub {
+    owner = "bmizerany";
+    repo = "roundup";
+    rev = "v${version}";
+    sha256 = "0nxaqmbv8mdvq9wcaqxk6k5mr31i68jzxf1wxa6pp7xp4prwdc9z";
+  };
+
+  prePatch = ''
+    # Don't change $PATH
+    substituteInPlace configure --replace PATH= NIRVANA=
+    # There are only man pages in sections 1 and 5 \
+    substituteInPlace Makefile --replace "{1..9}" "1 5"
+  '';
+
+  nativeBuildInputs = [ ronn shocco ];
+
+  installTargets = [ "install" "install-man" ];
+
+  preInstall = ''
+    for i in 1 5; do
+      mkdir -p $out/share/man/man$i
+    done
+  '';
+
+  meta = with stdenv.lib; {
+    description = "A unit testing tool for running test plans which are written in any POSIX shell";
+    homepage = http://bmizerany.github.io/roundup/;
+    license = licenses.mit;
+    maintainers = with maintainers; [ dotlambda ];
+    platforms = platforms.all;
+  };
+}
diff --git a/pkgs/tools/misc/screen/default.nix b/pkgs/tools/misc/screen/default.nix
index 156db640acdf..1753f52ab1b6 100644
--- a/pkgs/tools/misc/screen/default.nix
+++ b/pkgs/tools/misc/screen/default.nix
@@ -16,6 +16,13 @@ stdenv.mkDerivation rec {
     "--enable-colors256"
   ];
 
+  patches = stdenv.lib.optional stdenv.hostPlatform.isMusl
+    (fetchpatch {
+      url = https://gist.githubusercontent.com/yujinakayama/4608863/raw/76b9f89af5e5a2e97d9a0f36aac989fb56cf1447/gistfile1.diff;
+      sha256 = "0f9bf83p8zdxaa1pr75jyf5g8xr3r8kv7cyzzbpraa1q4j15ss1p";
+      stripLen = 1;
+    });
+
   buildInputs = [ ncurses ] ++ stdenv.lib.optional stdenv.isLinux pam
                             ++ stdenv.lib.optional stdenv.isDarwin utmp;
 
diff --git a/pkgs/tools/misc/screenfetch/default.nix b/pkgs/tools/misc/screenfetch/default.nix
index 9ef0c9ebdf7d..a9cd9d75de8e 100644
--- a/pkgs/tools/misc/screenfetch/default.nix
+++ b/pkgs/tools/misc/screenfetch/default.nix
@@ -3,14 +3,30 @@
 , darwin
 }:
 
-stdenv.mkDerivation {
-  name = "screenFetch-2016-10-11";
+let
+  path = lib.makeBinPath ([
+    coreutils gawk gnused findutils
+    gnugrep ncurses bc
+  ] ++ lib.optionals stdenv.isLinux [
+    procps
+    xdpyinfo
+    xprop
+  ] ++ lib.optionals stdenv.isDarwin (with darwin; [
+    adv_cmds
+    DarwinTools
+    system_cmds
+    "/usr" # some commands like defaults is not available to us
+  ]));
+
+in stdenv.mkDerivation rec {
+  name = "screenFetch-${version}";
+  version = "3.8.0";
 
   src = fetchFromGitHub {
-    owner = "KittyKatt";
-    repo = "screenFetch";
-    rev = "89e51f24018c89b3647deb24406a9af3a78bbe99";
-    sha256 = "0i2k261jj2s4sfhav7vbsd362pa0gghw6qhwafhmicmf8hq2a18v";
+    owner  = "KittyKatt";
+    repo   = "screenFetch";
+    rev    = "v${version}";
+    sha256 = "00ibv72cb7cqfpljyzgvajhbp0clqsqliz18nyv83bfy3gkf2qs8";
   };
 
   nativeBuildInputs = [ makeWrapper ];
@@ -18,40 +34,29 @@ stdenv.mkDerivation {
   installPhase = ''
     install -Dm 0755 screenfetch-dev $out/bin/screenfetch
     install -Dm 0644 screenfetch.1 $out/share/man/man1/screenfetch.1
+    install -Dm 0644 -t $out/share/doc/screenfetch CHANGELOG COPYING README.mkdn TODO
 
-    # Fix all of the depedencies of screenfetch
+    # Fix all of the dependencies of screenfetch
     patchShebangs $out/bin/screenfetch
     wrapProgram "$out/bin/screenfetch" \
-      --set PATH ${lib.makeBinPath ([
-        coreutils gawk gnused findutils
-        gnugrep ncurses bc
-      ] ++ lib.optionals stdenv.isLinux [
-        procps
-        xdpyinfo
-        xprop
-      ] ++ lib.optionals stdenv.isDarwin (with darwin; [
-        adv_cmds
-        DarwinTools
-        system_cmds
-        "/usr" # some commands like defaults is not available to us
-      ]))}
+      --prefix PATH : ${path}
   '';
 
   meta = with lib; {
     description = "Fetches system/theme information in terminal for Linux desktop screenshots";
     longDescription = ''
-    screenFetch is a "Bash Screenshot Information Tool". This handy Bash
-    script can be used to generate one of those nifty terminal theme
-    information + ASCII distribution logos you see in everyone's screenshots
-    nowadays. It will auto-detect your distribution and display an ASCII
-    version of that distribution's logo and some valuable information to the
-    right. There are options to specify no ascii art, colors, taking a
-    screenshot upon displaying info, and even customizing the screenshot
-    command! This script is very easy to add to and can easily be extended.
+      screenFetch is a "Bash Screenshot Information Tool". This handy Bash
+      script can be used to generate one of those nifty terminal theme
+      information + ASCII distribution logos you see in everyone's screenshots
+      nowadays. It will auto-detect your distribution and display an ASCII
+      version of that distribution's logo and some valuable information to the
+      right. There are options to specify no ascii art, colors, taking a
+      screenshot upon displaying info, and even customizing the screenshot
+      command! This script is very easy to add to and can easily be extended.
     '';
     license = licenses.gpl3;
-    homepage = http://git.silverirc.com/cgit.cgi/screenfetch-dev.git/;
-    maintainers = with maintainers; [relrod];
+    homepage = https://github.com/KittyKatt/screenFetch;
+    maintainers = with maintainers; [ relrod ];
     platforms = platforms.all;
   };
 }
diff --git a/pkgs/tools/misc/smenu/default.nix b/pkgs/tools/misc/smenu/default.nix
index f1493630a2a5..061a6c58d237 100644
--- a/pkgs/tools/misc/smenu/default.nix
+++ b/pkgs/tools/misc/smenu/default.nix
@@ -1,14 +1,14 @@
 { stdenv, fetchFromGitHub, ncurses }:
 
 stdenv.mkDerivation rec {
-  version = "v0.9.10";
+  version = "v0.9.11";
   name = "smenu-${version}";
 
   src = fetchFromGitHub {
     owner  = "p-gen";
     repo   = "smenu";
     rev    = version;
-    sha256 = "1fh0s5zhx8ps760w0yxjv682lhahz1j63i0gdwvvr5vnvyx6c40d";
+    sha256 = "1va5gsxniin02casgdrqxvpzccm0vwjiql60qrsvncrq6nm6bz0d";
   };
 
   buildInputs = [ ncurses ];
diff --git a/pkgs/tools/misc/ultrastar-creator/default.nix b/pkgs/tools/misc/ultrastar-creator/default.nix
index 30473059d6d9..435a5850920a 100644
--- a/pkgs/tools/misc/ultrastar-creator/default.nix
+++ b/pkgs/tools/misc/ultrastar-creator/default.nix
@@ -35,6 +35,6 @@ stdenv.mkDerivation rec {
     description = "Ultrastar karaoke song creation tool";
     homepage = https://github.com/UltraStar-Deluxe/UltraStar-Creator;
     license = licenses.gpl2;
-    maintainers = with maintainers; [ profpatsch ];
+    maintainers = with maintainers; [ Profpatsch ];
   };
 }
diff --git a/pkgs/tools/misc/ultrastar-manager/default.nix b/pkgs/tools/misc/ultrastar-manager/default.nix
index af443661b6cd..d9739f7846b7 100644
--- a/pkgs/tools/misc/ultrastar-manager/default.nix
+++ b/pkgs/tools/misc/ultrastar-manager/default.nix
@@ -115,6 +115,6 @@ in stdenv.mkDerivation {
     description = "Ultrastar karaoke song manager";
     homepage = https://github.com/UltraStar-Deluxe/UltraStar-Manager;
     license = licenses.gpl2;
-    maintainers = with maintainers; [ profpatsch ];
+    maintainers = with maintainers; [ Profpatsch ];
   };
 }
diff --git a/pkgs/tools/misc/uudeview/default.nix b/pkgs/tools/misc/uudeview/default.nix
new file mode 100644
index 000000000000..e66580f25ffb
--- /dev/null
+++ b/pkgs/tools/misc/uudeview/default.nix
@@ -0,0 +1,24 @@
+{ stdenv, fetchurl, tcl, tk }:
+
+stdenv.mkDerivation rec {
+  name = "uudeview-0.5.20";
+  src = fetchurl {
+    url = "http://www.fpx.de/fp/Software/UUDeview/download/${name}.tar.gz";
+    sha256 = "0dg4v888fxhmf51vxq1z1gd57fslsidn15jf42pj4817vw6m36p4";
+  };
+
+  buildInputs = [ tcl tk ];
+  hardeningDisable = [ "format" ];
+  configureFlags = [ "--enable-tk=${tk.dev}" "--enable-tcl=${tcl}" ];
+  postPatch = ''
+    substituteInPlace tcl/xdeview --replace "exec uuwish" "exec $out/bin/uuwish"
+  '';
+
+  meta = {
+    description = "The Nice and Friendly Decoder";
+    homepage = http://www.fpx.de/fp/Software/UUDeview/;
+    license = stdenv.lib.licenses.gpl2;
+    maintainers = with stdenv.lib.maintainers; [ woffs ];
+    platforms = stdenv.lib.platforms.linux;
+  };
+}
diff --git a/pkgs/tools/misc/vdirsyncer/default.nix b/pkgs/tools/misc/vdirsyncer/default.nix
index 382b69722a42..ad5b259eb77a 100644
--- a/pkgs/tools/misc/vdirsyncer/default.nix
+++ b/pkgs/tools/misc/vdirsyncer/default.nix
@@ -6,12 +6,12 @@ let
   pythonPackages = python3Packages;
 in
 pythonPackages.buildPythonApplication rec {
-  version = "0.16.3";
+  version = "0.16.4";
   name = "vdirsyncer-${version}";
 
   src = fetchurl {
     url = "mirror://pypi/v/vdirsyncer/${name}.tar.gz";
-    sha256 = "0dpwbfi97ksijqng191659m8k0v215y8ld95w8gb126m4m96qpzw";
+    sha256 = "03wva48bgv1ad3df6plc9b8xxh6k8bcaxrhlzwh81c9mzn5bspzv";
   };
 
   propagatedBuildInputs = with pythonPackages; [
diff --git a/pkgs/tools/misc/watchexec/default.nix b/pkgs/tools/misc/watchexec/default.nix
new file mode 100644
index 000000000000..2b801bb74a42
--- /dev/null
+++ b/pkgs/tools/misc/watchexec/default.nix
@@ -0,0 +1,25 @@
+{ stdenv, lib, rustPlatform, fetchFromGitHub }:
+
+with rustPlatform;
+
+buildRustPackage rec {
+  name = "watchexec-${version}";
+  version = "1.8.6";
+
+  src = fetchFromGitHub {
+    owner = "mattgreen";
+    repo = "watchexec";
+    rev = "${version}";
+    sha256 = "1jib51dbr6s1iq21inm2xfsjnz1730nyd3af1x977iqivmwdisax";
+  };
+
+  cargoSha256 = "0sm1jvx1y18h7y66ilphsqmkbdxc76xly8y7kxmqwdi4lw54i9vl";
+
+  meta = with stdenv.lib; {
+    description = "Executes commands in response to file modifications";
+    homepage = https://github.com/mattgreen/watchexec;
+    license = with licenses; [ asl20 ];
+    maintainers = [ maintainers.michalrus ];
+    platforms = [ "x86_64-linux" ];
+  };
+}
diff --git a/pkgs/tools/misc/yle-dl/default.nix b/pkgs/tools/misc/yle-dl/default.nix
index 2967892521ca..303722aac0b8 100644
--- a/pkgs/tools/misc/yle-dl/default.nix
+++ b/pkgs/tools/misc/yle-dl/default.nix
@@ -2,13 +2,13 @@
 
 pythonPackages.buildPythonApplication rec {
   name = "yle-dl-${version}";
-  version = "2.30";
+  version = "2.31";
 
   src = fetchFromGitHub {
     owner = "aajanki";
     repo = "yle-dl";
     rev = version;
-    sha256 = "08qqsg0rmp4xfzmla81f0a4vblqfw3rh90wvxm91vbm6937b4i7i";
+    sha256 = "0k93p9csyjm0w33diwl5s22kzs3g78jl3n9k8nxxpqrybfjl912f";
   };
 
   propagatedBuildInputs = with pythonPackages; [ lxml pyamf pycrypto requests future ffmpeg ];
diff --git a/pkgs/tools/misc/youtube-dl/default.nix b/pkgs/tools/misc/youtube-dl/default.nix
index c4595a1a94e1..0386896d97f8 100644
--- a/pkgs/tools/misc/youtube-dl/default.nix
+++ b/pkgs/tools/misc/youtube-dl/default.nix
@@ -16,11 +16,11 @@ with stdenv.lib;
 buildPythonApplication rec {
 
   name = "youtube-dl-${version}";
-  version = "2018.01.27";
+  version = "2018.02.08";
 
   src = fetchurl {
     url = "https://yt-dl.org/downloads/${version}/${name}.tar.gz";
-    sha256 = "14vbm8pr6xdrdbk8j9k4v82rnalbdpk2lcm7n9wj6z6d441ymji9";
+    sha256 = "0iq5mav782gz0gm00rry3v7gdxkkx4y1k0p20pvz32ga4id5k1mg";
   };
 
   nativeBuildInputs = [ makeWrapper ];
diff --git a/pkgs/tools/misc/zsh-autoenv/default.nix b/pkgs/tools/misc/zsh-autoenv/default.nix
new file mode 100644
index 000000000000..492b72a176ed
--- /dev/null
+++ b/pkgs/tools/misc/zsh-autoenv/default.nix
@@ -0,0 +1,40 @@
+{ stdenv, fetchFromGitHub, bash }:
+
+stdenv.mkDerivation rec {
+  name = "zsh-autoenv-${version}";
+  version = "2017-12-16";
+
+  src = fetchFromGitHub {
+    owner = "Tarrasch";
+    repo = "zsh-autoenv";
+    rev = "2c8cfbcea8e7286649840d7ec98d7e9d5e1d45a0";
+    sha256 = "004svkfzhc3ab6q2qvwzgj36wvicg5bs8d2gcibx6adq042di7zj";
+  };
+
+  buildPhase = ":";
+
+  installPhase = ''
+    mkdir -p $out/{bin,share}
+    cp -R $src $out/share/zsh-autoenv
+
+    cat <<SCRIPT > $out/bin/zsh-autoenv-share
+    #!${stdenv.shell}
+    # Run this script to find the fzf shared folder where all the shell
+    # integration scripts are living.
+    echo $out/share/zsh-autoenv
+    SCRIPT
+    chmod +x $out/bin/zsh-autoenv-share
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Automatically sources whitelisted .autoenv.zsh files";
+    longDescription = ''
+      zsh-autoenv automatically sources (known/whitelisted)
+      .autoenv.zsh files, typically used in project root directories.
+      It handles "enter" and "leave" events, nesting, and stashing of
+      variables (overwriting and restoring).
+    '';
+    homepage = https://github.com/Tarrasch/zsh-autoenv;
+    platforms = stdenv.lib.platforms.all;
+  };
+}
diff --git a/pkgs/tools/networking/acme-client/default.nix b/pkgs/tools/networking/acme-client/default.nix
new file mode 100644
index 000000000000..1e10529082f5
--- /dev/null
+++ b/pkgs/tools/networking/acme-client/default.nix
@@ -0,0 +1,38 @@
+{ stdenv
+, apple_sdk ? null
+, cacert
+, defaultCaFile ? "${cacert}/etc/ssl/certs/ca-bundle.crt"
+, fetchurl
+, libbsd
+, libressl
+, pkgconfig
+}:
+
+with stdenv.lib;
+
+stdenv.mkDerivation rec {
+  name = "acme-client-${version}";
+  version = "0.1.16";
+
+  src = fetchurl {
+    url = "https://kristaps.bsd.lv/acme-client/snapshots/acme-client-portable-${version}.tgz";
+    sha256 = "00q05b3b1dfnfp7sr1nbd212n0mqrycl3cr9lbs51m7ncaihbrz9";
+  };
+
+  buildInputs = [ libbsd libressl pkgconfig ]
+    ++ optional stdenv.isDarwin apple_sdk.sdk;
+
+  CFLAGS = "-DDEFAULT_CA_FILE='\"${defaultCaFile}\"'";
+
+  preConfigure = ''
+    export PREFIX="$out"
+  '';
+
+  meta = {
+    homepage = https://kristaps.bsd.lv/acme-client/;
+    description = "Secure ACME/Let's Encrypt client";
+    platforms = platforms.unix;
+    license = licenses.isc;
+    maintainers = with maintainers; [ pmahoney ];
+  };
+}
diff --git a/pkgs/tools/networking/arping/default.nix b/pkgs/tools/networking/arping/default.nix
new file mode 100644
index 000000000000..4358d22142d9
--- /dev/null
+++ b/pkgs/tools/networking/arping/default.nix
@@ -0,0 +1,25 @@
+{ stdenv, fetchFromGitHub, autoreconfHook, libnet, libpcap }:
+
+stdenv.mkDerivation rec {
+  version = "2.19";
+  name = "arping-${version}";
+
+  buildInputs = [ libnet libpcap ];
+
+  src = fetchFromGitHub {
+    owner = "ThomasHabets";
+    repo = "arping";
+    rev = "arping-${version}";
+    sha256 = "10gpil6ic17x8v628vhz9s98rnw1k8ci2xs56i52pr103irirczw";
+  };
+
+  nativeBuildInputs = [ autoreconfHook ];
+
+  meta = with stdenv.lib; {
+    description = "Broadcasts a who-has ARP packet on the network and prints answers";
+    homepage = https://github.com/ThomasHabets/arping;
+    license = with licenses; [ gpl2 ];
+    maintainers = [ maintainers.michalrus ];
+    platforms = platforms.unix;
+  };
+}
diff --git a/pkgs/tools/networking/biosdevname/default.nix b/pkgs/tools/networking/biosdevname/default.nix
index ae36980a60d8..93a98a10daad 100644
--- a/pkgs/tools/networking/biosdevname/default.nix
+++ b/pkgs/tools/networking/biosdevname/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "biosdevname-${version}";
-  version = "0.7.2";
+  version = "0.7.3";
 
   src = fetchFromGitHub {
     owner = "dell";
     repo = "biosdevname";
     rev = "v${version}";
-    sha256 = "183k6f9nayhai27y6nizf0sp9bj1kabykj66hcwdzllhrrh505sd";
+    sha256 = "19wbb79x9h79k55sgd4dylvdbhhrvfaiaknbw9s1wvfmirkxa1dz";
   };
 
   nativeBuildInputs = [ autoreconfHook ];
diff --git a/pkgs/tools/networking/cjdns/default.nix b/pkgs/tools/networking/cjdns/default.nix
index d5819639fa2c..d16e730b5abf 100644
--- a/pkgs/tools/networking/cjdns/default.nix
+++ b/pkgs/tools/networking/cjdns/default.nix
@@ -1,6 +1,6 @@
 { stdenv, fetchFromGitHub, nodejs, which, python27, utillinux }:
 
-let version = "20"; in
+let version = "20.1"; in
 stdenv.mkDerivation {
   name = "cjdns-"+version;
 
@@ -8,7 +8,7 @@ stdenv.mkDerivation {
     owner = "cjdelisle";
     repo = "cjdns";
     rev = "cjdns-v${version}";
-    sha256 = "0gqcspiz1n0j711vwq807cy456dkcf03r376l04qc92173g2fzrx";
+    sha256 = "033q8av46y0q8vxyqvb4yjh1lz6a17mmk8lhdpwdcqnsws8xjjsw";
   };
 
   buildInputs = [ which python27 nodejs ] ++
diff --git a/pkgs/tools/networking/connman-ncurses/default.nix b/pkgs/tools/networking/connman-ncurses/default.nix
new file mode 100644
index 000000000000..8c4d4fa84865
--- /dev/null
+++ b/pkgs/tools/networking/connman-ncurses/default.nix
@@ -0,0 +1,32 @@
+{ stdenv, fetchFromGitHub, autoreconfHook, pkgconfig, dbus, json_c, ncurses, connman }:
+
+stdenv.mkDerivation rec {
+  name = "connman-ncurses-${version}";
+  version = "2015-07-21";
+
+  src = fetchFromGitHub {
+    owner = "eurogiciel-oss";
+    repo = "connman-json-client";
+    rev = "3c34b2ee62d2e188090d20e7ed2fd94bab9c47f2";
+    sha256 = "1831r0776fv481g8kgy1dkl750pzv47835dw11sslq2k6mm6i9p1";
+  };
+
+  nativeBuildInputs = [ autoreconfHook pkgconfig ];
+
+  buildInputs = [ dbus ncurses json_c connman ];
+
+  NIX_CFLAGS_COMPILE = "-Wno-error";
+  
+  installPhase = ''
+    mkdir -p "$out/bin"
+    cp -va connman_ncurses "$out/bin/"
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Simple ncurses UI for connman";
+    homepage = https://github.com/eurogiciel-oss/connman-json-client;
+    license = licenses.gpl2;
+    platforms = platforms.linux;
+    maintainers = [ maintainers.romildo ];
+  };
+}
diff --git a/pkgs/tools/networking/curl/default.nix b/pkgs/tools/networking/curl/default.nix
index 16b22e3f2554..dbe2a6639352 100644
--- a/pkgs/tools/networking/curl/default.nix
+++ b/pkgs/tools/networking/curl/default.nix
@@ -27,7 +27,7 @@ stdenv.mkDerivation rec {
   name = "curl-7.58.0";
 
   src = fetchurl {
-    url = "http://curl.haxx.se/download/${name}.tar.bz2";
+    url = "https://curl.haxx.se/download/${name}.tar.bz2";
     sha256 = "0cg7klhf1ksnbw5wvwa802qir877zv4y3dj7swz1xh07g3wq3c0w";
   };
 
diff --git a/pkgs/tools/networking/dhcp/default.nix b/pkgs/tools/networking/dhcp/default.nix
index e7a593ff830c..1812e95dcbb7 100644
--- a/pkgs/tools/networking/dhcp/default.nix
+++ b/pkgs/tools/networking/dhcp/default.nix
@@ -37,6 +37,8 @@ stdenv.mkDerivation rec {
     "--localstatedir=/var"
   ] ++ stdenv.lib.optionals (openldap != null) [ "--with-ldap" "--with-ldapcrypto" ];
 
+  NIX_CFLAGS_COMPILE = [ "-Wno-error=pointer-compare" ];
+
   installFlags = [ "DESTDIR=\${out}" ];
 
   postInstall =
diff --git a/pkgs/tools/networking/http-prompt/default.nix b/pkgs/tools/networking/http-prompt/default.nix
index fd7caf927653..b1f83c8b2161 100644
--- a/pkgs/tools/networking/http-prompt/default.nix
+++ b/pkgs/tools/networking/http-prompt/default.nix
@@ -1,14 +1,14 @@
 { stdenv, fetchFromGitHub, pythonPackages, httpie }:
 
 pythonPackages.buildPythonApplication rec {
-  version = "0.11.0";
+  version = "0.11.1";
   name = "http-prompt";
 
   src = fetchFromGitHub {
     rev = "v${version}";
     repo = "http-prompt";
     owner = "eliangcs";
-    sha256 = "0arl85880nnyfx8cvpzm6cr8nalhyrkz5zqfr628p487rwqv45ip";
+    sha256 = "0gi76wcn6lxkd74ljpbyhr7ylhq6sm8z7h66dnfmpsw4nhw49178";
   };
 
   propagatedBuildInputs = with pythonPackages; [
diff --git a/pkgs/tools/networking/inetutils/default.nix b/pkgs/tools/networking/inetutils/default.nix
index ad058174cff1..c5ecb5eb6dad 100644
--- a/pkgs/tools/networking/inetutils/default.nix
+++ b/pkgs/tools/networking/inetutils/default.nix
@@ -15,7 +15,13 @@ stdenv.mkDerivation rec {
 
   buildInputs = [ ncurses /* for `talk' */ perl /* for `whois' */ help2man ];
 
-  configureFlags = "--with-ncurses-include-dir=${ncurses.dev}/include";
+  configureFlags = [ "--with-ncurses-include-dir=${ncurses.dev}/include" ]
+  ++ stdenv.lib.optionals stdenv.hostPlatform.isMusl [ # Musl doesn't define rcmd
+    "--disable-rcp"
+    "--disable-rsh"
+    "--disable-rlogin"
+    "--disable-rexec"
+  ];
 
   # Test fails with "UNIX socket name too long", probably because our
   # $TMPDIR is too long.
@@ -25,7 +31,7 @@ stdenv.mkDerivation rec {
   postInstall = ''
     # XXX: These programs are normally installed setuid but since it
     # fails, they end up being non-executable, hence this hack.
-    chmod +x $out/bin/{ping,ping6,rcp,rlogin,rsh,traceroute}
+    chmod +x $out/bin/{ping,ping6,${stdenv.lib.optionalString (!stdenv.hostPlatform.isMusl) ''rcp,rlogin,rsh,''}traceroute}
   '';
 
   meta = {
diff --git a/pkgs/tools/networking/iperf/3.nix b/pkgs/tools/networking/iperf/3.nix
index d69b52a50014..28b53a8c2477 100644
--- a/pkgs/tools/networking/iperf/3.nix
+++ b/pkgs/tools/networking/iperf/3.nix
@@ -1,15 +1,23 @@
-{ stdenv, fetchurl, openssl }:
+{ stdenv, fetchurl, openssl, fetchpatch }:
 
 stdenv.mkDerivation rec {
-  name = "iperf-3.3";
+  name = "iperf-3.4";
 
   src = fetchurl {
     url = "http://downloads.es.net/pub/iperf/${name}.tar.gz";
-    sha256 = "1n442bjkm1dvzmcj8z1i99yrmba489yz3f5v27ybymhh4mqn4nbg";
+    sha256 = "04ciywjhklzfrnp40675ssnkqxv90ad4v56i8vh8bpsiswr86lki";
   };
 
   buildInputs = [ openssl ];
 
+  patches = stdenv.lib.optionals stdenv.hostPlatform.isMusl [
+    (fetchpatch {
+      url = "http://git.alpinelinux.org/cgit/aports/plain/main/iperf3/remove-pg-flags.patch";
+      name = "remove-pg-flags.patch";
+      sha256 = "0lnczhass24kgq59drgdipnhjnw4l1cy6gqza7f2ah1qr4q104rm";
+    })
+  ];
+
   postInstall = ''
     ln -s iperf3 $out/bin/iperf
   '';
diff --git a/pkgs/tools/networking/keepalived/default.nix b/pkgs/tools/networking/keepalived/default.nix
index fe8988dc41d9..140ea6860fc3 100644
--- a/pkgs/tools/networking/keepalived/default.nix
+++ b/pkgs/tools/networking/keepalived/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "keepalived-${version}";
-  version = "1.3.6";
+  version = "1.4.1";
 
   src = fetchFromGitHub {
     owner = "acassen";
     repo = "keepalived";
     rev = "v${version}";
-    sha256 = "05088vv510dlflzyg8sh8l8qfscnvxl6n6pw9ycp27zhb6r5cr5y";
+    sha256 = "1d3jnfhj9mpnc27wvgsiz2vr4lnvvccw3v128z16jpyibyv20ph0";
   };
 
   buildInputs = [
diff --git a/pkgs/tools/networking/minio-client/default.nix b/pkgs/tools/networking/minio-client/default.nix
index 303204c9c21e..7538c08249c0 100644
--- a/pkgs/tools/networking/minio-client/default.nix
+++ b/pkgs/tools/networking/minio-client/default.nix
@@ -1,39 +1,28 @@
-{ lib, stdenv, fetchurl, go }:
+{ stdenv, buildGoPackage, fetchFromGitHub }:
 
-stdenv.mkDerivation rec {
-  name = "minio-client-${shortVersion}";
+buildGoPackage rec {
+  name = "minio-client-${version}";
 
-  shortVersion = "20170206";
-  longVersion = "2017-02-06T20-16-19Z";
+  version = "2018-02-09T23-07-36Z";
 
-  src = fetchurl {
-    url = "https://github.com/minio/mc/archive/RELEASE.${lib.replaceStrings [":"] ["-"] longVersion}.tar.gz";
-    sha256 = "0k66kr7x669jvydcxp3rpvg8p9knhmcihpnjiqynhqgrdy16mr1f";
+  src = fetchFromGitHub {
+    owner = "minio";
+    repo = "mc";
+    rev = "RELEASE.${version}";
+    sha256 = "1mzjqcvl8740jkkrsyycwqminnd0vdl1m2mvq8hnywj8hs816bfd";
   };
 
-  buildInputs = [ go ];
+  goPackagePath = "github.com/minio/mc";
 
-  unpackPhase = ''
-    d=$TMPDIR/src/github.com/minio/mc
-    mkdir -p $d
-    tar xf $src -C $d --strip-component 1
-    export GOPATH=$TMPDIR
-    cd $d
-  '';
+  buildFlagsArray = [''-ldflags=
+    -X github.com/minio/mc/cmd.Version=${version}
+  ''];
 
-  buildPhase = ''
-    mkdir -p $out/bin
-    go build -o $out/bin/minio-client \
-      --ldflags "-X github.com/minio/mc/cmd.Version=${longVersion}"
-  '';
-
-  installPhase = "ln -s minio-client $out/bin/mc";
-
-  meta = {
+  meta = with stdenv.lib; {
     homepage = https://github.com/minio/mc;
     description = "A replacement for ls, cp, mkdir, diff and rsync commands for filesystems and object storage";
-    maintainers = [ lib.maintainers.eelco ];
-    platforms = lib.platforms.linux;
-    license = lib.licenses.asl20;
+    maintainers = with maintainers; [ eelco bachp ];
+    platforms = platforms.unix;
+    license = licenses.asl20;
   };
 }
diff --git a/pkgs/tools/networking/ntopng/default.nix b/pkgs/tools/networking/ntopng/default.nix
index d1a90d9d1aad..b307a8f6f131 100644
--- a/pkgs/tools/networking/ntopng/default.nix
+++ b/pkgs/tools/networking/ntopng/default.nix
@@ -53,6 +53,8 @@ stdenv.mkDerivation rec {
     sed 's|LIBS += -lstdc++.6||' -i Makefile
   '';
 
+  NIX_CFLAGS_COMPILE = [ "-fpermissive" ];
+
   meta = with stdenv.lib; {
     description = "High-speed web-based traffic analysis and flow collection tool";
     homepage = http://www.ntop.org/products/ntop/;
diff --git a/pkgs/tools/networking/openntpd/default.nix b/pkgs/tools/networking/openntpd/default.nix
index 7e1c257ec4b6..d63df830d0e6 100644
--- a/pkgs/tools/networking/openntpd/default.nix
+++ b/pkgs/tools/networking/openntpd/default.nix
@@ -12,6 +12,11 @@ stdenv.mkDerivation rec {
     sha256 = "1g6hi03ylhv47sbar3xxgsrar8schqfwn4glckh6m6lni67ndq85";
   };
 
+  prePatch = ''
+    sed -i '20i#include <sys/cdefs.h>' src/ntpd.h
+    sed -i '19i#include <sys/cdefs.h>' src/log.c
+  '';
+
   configureFlags = [
     "--with-privsep-path=${privsepPath}"
     "--with-privsep-user=${privsepUser}"
diff --git a/pkgs/tools/networking/ppp/default.nix b/pkgs/tools/networking/ppp/default.nix
index d07770260ff6..570e85c32815 100644
--- a/pkgs/tools/networking/ppp/default.nix
+++ b/pkgs/tools/networking/ppp/default.nix
@@ -23,6 +23,7 @@ stdenv.mkDerivation rec {
         url = "https://anonscm.debian.org/git/collab-maint/pkg-ppp.git/plain/debian/patches/rc_mksid-no-buffer-overflow?h=debian/2.4.7-1%2b4";
         sha256 = "1dk00j7bg9nfgskw39fagnwv1xgsmyv0xnkd6n1v5gy0psw0lvqh";
       })
+      ./musl-fix-headers.patch
     ];
 
   buildInputs = [ libpcap ];
diff --git a/pkgs/tools/networking/ppp/musl-fix-headers.patch b/pkgs/tools/networking/ppp/musl-fix-headers.patch
new file mode 100644
index 000000000000..d24f62896840
--- /dev/null
+++ b/pkgs/tools/networking/ppp/musl-fix-headers.patch
@@ -0,0 +1,137 @@
+diff --git a/include/net/ppp_defs.h b/include/net/ppp_defs.h
+index b06eda5..dafa36c 100644
+--- a/include/net/ppp_defs.h
++++ b/include/net/ppp_defs.h
+@@ -38,6 +38,8 @@
+ #ifndef _PPP_DEFS_H_
+ #define _PPP_DEFS_H_
+ 
++#include <sys/time.h>
++
+ /*
+  * The basic PPP frame.
+  */
+diff --git a/pppd/Makefile.linux b/pppd/Makefile.linux
+index a74c914..7acd2cf 100644
+--- a/pppd/Makefile.linux
++++ b/pppd/Makefile.linux
+@@ -126,7 +126,7 @@ LIBS	+= -lcrypt
+ endif
+ 
+ ifdef USE_LIBUTIL
+-CFLAGS	+= -DHAVE_LOGWTMP=1
++#CFLAGS	+= -DHAVE_LOGWTMP=1
+ LIBS	+= -lutil
+ endif
+ 
+diff --git a/pppd/magic.h b/pppd/magic.h
+index c81213b..305aece 100644
+--- a/pppd/magic.h
++++ b/pppd/magic.h
+@@ -42,6 +42,8 @@
+  * $Id: magic.h,v 1.5 2003/06/11 23:56:26 paulus Exp $
+  */
+ 
++#include <sys/cdefs.h>
++
+ void magic_init __P((void));	/* Initialize the magic number generator */
+ u_int32_t magic __P((void));	/* Returns the next magic number */
+ 
+diff --git a/pppd/plugins/rp-pppoe/if.c b/pppd/plugins/rp-pppoe/if.c
+index 91e9a57..9c0fac3 100644
+--- a/pppd/plugins/rp-pppoe/if.c
++++ b/pppd/plugins/rp-pppoe/if.c
+@@ -30,10 +30,6 @@ static char const RCSID[] =
+ #include <linux/if_packet.h>
+ #endif
+ 
+-#ifdef HAVE_NET_ETHERNET_H
+-#include <net/ethernet.h>
+-#endif
+-
+ #ifdef HAVE_ASM_TYPES_H
+ #include <asm/types.h>
+ #endif
+diff --git a/pppd/plugins/rp-pppoe/plugin.c b/pppd/plugins/rp-pppoe/plugin.c
+index a8c2bb4..ca34d79 100644
+--- a/pppd/plugins/rp-pppoe/plugin.c
++++ b/pppd/plugins/rp-pppoe/plugin.c
+@@ -46,7 +46,6 @@ static char const RCSID[] =
+ #include <unistd.h>
+ #include <fcntl.h>
+ #include <signal.h>
+-#include <net/ethernet.h>
+ #include <net/if_arp.h>
+ #include <linux/ppp_defs.h>
+ #include <linux/if_pppox.h>
+diff --git a/pppd/plugins/rp-pppoe/pppoe-discovery.c b/pppd/plugins/rp-pppoe/pppoe-discovery.c
+index 3d3bf4e..b5f82d3 100644
+--- a/pppd/plugins/rp-pppoe/pppoe-discovery.c
++++ b/pppd/plugins/rp-pppoe/pppoe-discovery.c
+@@ -27,10 +27,6 @@
+ #include <linux/if_packet.h>
+ #endif
+ 
+-#ifdef HAVE_NET_ETHERNET_H
+-#include <net/ethernet.h>
+-#endif
+-
+ #ifdef HAVE_ASM_TYPES_H
+ #include <asm/types.h>
+ #endif
+@@ -55,6 +51,8 @@ void die(int status)
+ 	exit(status);
+ }
+ 
++#define error(x...) fprintf(stderr, x)
++
+ /* Initialize frame types to RFC 2516 values.  Some broken peers apparently
+    use different frame types... sigh... */
+ 
+diff --git a/pppd/plugins/rp-pppoe/pppoe.h b/pppd/plugins/rp-pppoe/pppoe.h
+index 9ab2eee..4d68147 100644
+--- a/pppd/plugins/rp-pppoe/pppoe.h
++++ b/pppd/plugins/rp-pppoe/pppoe.h
+@@ -86,18 +86,6 @@ typedef unsigned long UINT32_t;
+ 
+ #include <netinet/in.h>
+ 
+-#ifdef HAVE_NETINET_IF_ETHER_H
+-#include <sys/types.h>
+-
+-#ifdef HAVE_SYS_SOCKET_H
+-#include <sys/socket.h>
+-#endif
+-#ifndef HAVE_SYS_DLPI_H
+-#include <netinet/if_ether.h>
+-#endif
+-#endif
+-
+-
+ 
+ /* Ethernet frame types according to RFC 2516 */
+ #define ETH_PPPOE_DISCOVERY 0x8863
+diff --git a/pppd/sys-linux.c b/pppd/sys-linux.c
+index 6d71530..86d224e 100644
+--- a/pppd/sys-linux.c
++++ b/pppd/sys-linux.c
+@@ -102,19 +102,11 @@
+ #define MAX_ADDR_LEN 7
+ #endif
+ 
+-#if __GLIBC__ >= 2
+ #include <asm/types.h>		/* glibc 2 conflicts with linux/types.h */
+ #include <net/if.h>
+ #include <net/if_arp.h>
+ #include <net/route.h>
+ #include <netinet/if_ether.h>
+-#else
+-#include <linux/types.h>
+-#include <linux/if.h>
+-#include <linux/if_arp.h>
+-#include <linux/route.h>
+-#include <linux/if_ether.h>
+-#endif
+ #include <netinet/in.h>
+ #include <arpa/inet.h>
+ 
diff --git a/pkgs/tools/networking/siege/default.nix b/pkgs/tools/networking/siege/default.nix
index 93fc28b48bf2..cac3e3e6361f 100644
--- a/pkgs/tools/networking/siege/default.nix
+++ b/pkgs/tools/networking/siege/default.nix
@@ -12,6 +12,10 @@ stdenv.mkDerivation rec {
 
   buildInputs = [ openssl zlib ];
 
+  prePatch = ''
+    sed -i -e 's/u_int32_t/uint32_t/g' -e '1i#include <stdint.h>' src/hash.c
+  '';
+
   configureFlags = [
     "--with-ssl=${openssl.dev}"
     "--with-zlib=${zlib.dev}"
diff --git a/pkgs/tools/networking/stunnel/default.nix b/pkgs/tools/networking/stunnel/default.nix
index deac37468360..0d328c02d371 100644
--- a/pkgs/tools/networking/stunnel/default.nix
+++ b/pkgs/tools/networking/stunnel/default.nix
@@ -5,8 +5,10 @@ stdenv.mkDerivation rec {
   version = "5.44";
 
   src = fetchurl {
-    url    = "http://www.stunnel.org/downloads/${name}.tar.gz";
-    sha256 = "1692y69wl7j6yjgnrrzclgzb34bxsaxjzl1dfy47vms7pdfk42lr";
+    url    = "https://www.stunnel.org/downloads/${name}.tar.gz";
+    sha256 = "990a325dbb47d77d88772dd02fbbd27d91b1fea3ece76c9ff4461eca93f12299";
+    # please use the contents of "https://www.stunnel.org/downloads/${name}.tar.gz.sha256",
+    # not the output of `nix-prefetch-url`
   };
 
   buildInputs = [ openssl ];
diff --git a/pkgs/tools/networking/tinc/default.nix b/pkgs/tools/networking/tinc/default.nix
index 508816dbfa81..4f6bec9c0084 100644
--- a/pkgs/tools/networking/tinc/default.nix
+++ b/pkgs/tools/networking/tinc/default.nix
@@ -1,12 +1,12 @@
 {stdenv, fetchurl, lzo, openssl, zlib}:
 
 stdenv.mkDerivation rec {
-  version = "1.0.32";
+  version = "1.0.33";
   name = "tinc-${version}";
 
   src = fetchurl {
     url = "http://www.tinc-vpn.org/packages/tinc-${version}.tar.gz";
-    sha256 = "11smq1h6jyp6x2cwrv2zxck9phzdz3svi95pxnvvpd4dzzm4zcjd";
+    sha256 = "1x0hpfz13vn4pl6dcpnls6xq3rfcbdsg90awcfn53ijb8k35svvz";
   };
 
   buildInputs = [ lzo openssl zlib ];
diff --git a/pkgs/tools/networking/tlspool/default.nix b/pkgs/tools/networking/tlspool/default.nix
index acb5a042ffcc..80bac726457b 100644
--- a/pkgs/tools/networking/tlspool/default.nix
+++ b/pkgs/tools/networking/tlspool/default.nix
@@ -51,7 +51,7 @@ stdenv.mkDerivation rec {
   meta = with stdenv.lib; {
     description = "A supercharged TLS daemon that allows for easy, strong and consistent deployment";
     license = licenses.bsd2;
-    homepage = https://www.tlspool.org;
+    homepage = http://www.tlspool.org;
     maintainers = with maintainers; [ leenaars qknight ];
   };
 }
diff --git a/pkgs/tools/networking/unbound/default.nix b/pkgs/tools/networking/unbound/default.nix
index 614447cd5ecf..cc2f994d0d54 100644
--- a/pkgs/tools/networking/unbound/default.nix
+++ b/pkgs/tools/networking/unbound/default.nix
@@ -27,7 +27,7 @@ stdenv.mkDerivation rec {
 
   installFlags = [ "configfile=\${out}/etc/unbound/unbound.conf" ];
 
-  preFixup = stdenv.lib.optionalString stdenv.isLinux
+  preFixup = stdenv.lib.optionalString (stdenv.isLinux && !stdenv.hostPlatform.isMusl) # XXX: revisit
     # Build libunbound again, but only against nettle instead of openssl.
     # This avoids gnutls.out -> unbound.lib -> openssl.out.
     # There was some problem with this on Darwin; let's not complicate non-Linux.
diff --git a/pkgs/tools/package-management/conda/default.nix b/pkgs/tools/package-management/conda/default.nix
new file mode 100644
index 000000000000..4589cfcec880
--- /dev/null
+++ b/pkgs/tools/package-management/conda/default.nix
@@ -0,0 +1,71 @@
+{ lib
+, stdenv
+, fetchurl
+, runCommand
+, makeWrapper
+, buildFHSUserEnv
+, libselinux
+, xorg
+# Conda installs its packages and environments under this directory
+, installationPath ? "~/.conda"
+# Conda manages most pkgs itself, but expects a few to be on the system.
+, condaDeps ? [ stdenv.cc xorg.libSM xorg.libICE xorg.libXrender libselinux ]
+# Any extra nixpkgs you'd like available in the FHS env for Conda to use
+, extraPkgs ? [ ]
+}:
+
+# How to use this package?
+#
+# First-time setup: this nixpkg downloads the conda installer and provides a FHS
+# env in which it can run. On first use, the user will need to install conda to
+# the installPath using the installer:
+# $ nix-env -iA conda
+# $ conda-shell
+# $ conda-install
+#
+# Under normal usage, simply call `conda-shell` to activate the FHS env,
+# and then use conda commands as normal:
+# $ conda-shell
+# $ conda install spyder
+let
+  version = "4.3.31";
+  src = fetchurl {
+      url = "https://repo.continuum.io/miniconda/Miniconda3-${version}-Linux-x86_64.sh";
+      sha256 = "1rklq81s9v7xz1q0ha99w2sl6kyc5vhk6b21cza0jr3b8cgz0lam";
+  };
+
+  conda = runCommand "conda-install" { buildInputs = [ makeWrapper ]; }
+    ''
+      mkdir -p $out/bin
+      cp ${src} $out/bin/miniconda-installer.sh
+      chmod +x $out/bin/miniconda-installer.sh
+
+      makeWrapper                            \
+        $out/bin/miniconda-installer.sh      \
+        $out/bin/conda-install               \
+        --add-flags "-p ${installationPath}" \
+        --add-flags "-b"
+    '';
+in
+  buildFHSUserEnv {
+    name = "conda-shell";
+    targetPkgs = pkgs: (builtins.concatLists [ [ conda ] condaDeps extraPkgs]);
+    profile = ''
+      # Add conda to PATH
+      export PATH=${installationPath}/bin:$PATH
+      # Paths for gcc if compiling some C sources with pip
+      export NIX_CFLAGS_COMPILE="-I${installationPath}/include"
+      export NIX_CFLAGS_LINK="-L${installationPath}lib"
+      # Some other required environment variables
+      export FONTCONFIG_FILE=/etc/fonts/fonts.conf
+      export QTCOMPOSE=${xorg.libX11}/share/X11/locale
+    '';
+
+    meta = {
+      description = "Conda is a package manager for Python";
+      homepage = https://conda.io/;
+      platforms = lib.platforms.linux;
+      license = lib.licenses.bsd3;
+      maintainers = with lib.maintainers; [ jluttine bhipple ];
+    };
+  }
diff --git a/pkgs/tools/package-management/nix/default.nix b/pkgs/tools/package-management/nix/default.nix
index 9f41e00ac0e9..6e73b3378e21 100644
--- a/pkgs/tools/package-management/nix/default.nix
+++ b/pkgs/tools/package-management/nix/default.nix
@@ -1,8 +1,8 @@
 { lib, stdenv, fetchurl, fetchFromGitHub, perl, curl, bzip2, sqlite, openssl ? null, xz
 , pkgconfig, boehmgc, perlPackages, libsodium, aws-sdk-cpp, brotli
 , autoreconfHook, autoconf-archive, bison, flex, libxml2, libxslt, docbook5, docbook5_xsl
-, libseccomp, busybox
-, hostPlatform
+, libseccomp, busybox-sandbox-shell
+, hostPlatform, buildPlatform
 , storeDir ? "/nix/store"
 , stateDir ? "/nix/var"
 , confDir ? "/etc"
@@ -10,17 +10,7 @@
 
 let
 
-  sh = busybox.override {
-    useMusl = true;
-    enableStatic = true;
-    enableMinimal = true;
-    extraConfig = ''
-      CONFIG_ASH y
-      CONFIG_ASH_BUILTIN_ECHO y
-      CONFIG_ASH_BUILTIN_TEST y
-      CONFIG_ASH_OPTIMIZE_FOR_SIZE y
-    '';
-  };
+  sh = busybox-sandbox-shell;
 
   common = { name, suffix ? "", src, fromGit ? false }: stdenv.mkDerivation rec {
     inherit name src;
@@ -34,13 +24,13 @@ let
 
     nativeBuildInputs =
       [ pkgconfig ]
-      ++ lib.optionals (!is20) [ perl ]
+      ++ lib.optionals (!is20) [ curl perl ]
       ++ lib.optionals fromGit [ autoreconfHook autoconf-archive bison flex libxml2 libxslt docbook5 docbook5_xsl ];
 
-    buildInputs = [ curl openssl sqlite xz ]
+    buildInputs = [ curl openssl sqlite xz bzip2 ]
       ++ lib.optional (stdenv.isLinux || stdenv.isDarwin) libsodium
       ++ lib.optionals fromGit [ brotli ] # Since 1.12
-      ++ lib.optional stdenv.isLinux libseccomp
+      ++ lib.optional (stdenv.isLinux && !hostPlatform.isRiscV) libseccomp
       ++ lib.optional ((stdenv.isLinux || stdenv.isDarwin) && is20)
           (aws-sdk-cpp.override {
             apis = ["s3"];
@@ -49,15 +39,6 @@ let
 
     propagatedBuildInputs = [ boehmgc ];
 
-    # Note: bzip2 is not passed as a build input, because the unpack phase
-    # would end up using the wrong bzip2 when cross-compiling.
-    # XXX: The right thing would be to reinstate `--with-bzip2' in Nix.
-    postUnpack =
-      '' export CPATH="${bzip2.dev}/include"
-         export LIBRARY_PATH="${bzip2.out}/lib"
-         export CXXFLAGS="-Wno-error=reserved-user-defined-literal"
-      '';
-
     configureFlags =
       [ "--with-store-dir=${storeDir}"
         "--localstatedir=${stateDir}"
@@ -71,40 +52,24 @@ let
         "--with-www-curl=${perlPackages.WWWCurl}/${perl.libPrefix}"
       ] ++ lib.optionals (is20 && stdenv.isLinux) [
         "--with-sandbox-shell=${sh}/bin/busybox"
-      ];
+      ]
+      ++ lib.optional (
+          hostPlatform != buildPlatform && hostPlatform ? nix && hostPlatform.nix ? system
+      ) ''--with-system=${hostPlatform.nix.system}''
+         # RISC-V support in progress https://github.com/seccomp/libseccomp/pull/50
+      ++ lib.optional hostPlatform.isRiscV "--disable-seccomp-sandboxing";
 
     makeFlags = "profiledir=$(out)/etc/profile.d";
 
     installFlags = "sysconfdir=$(out)/etc";
 
-    doInstallCheck = true;
+    doInstallCheck = true; # not cross
 
     # socket path becomes too long otherwise
     preInstallCheck = lib.optional stdenv.isDarwin "export TMPDIR=/tmp";
 
     separateDebugInfo = stdenv.isLinux;
 
-    crossAttrs = {
-      postUnpack =
-        '' export CPATH="${bzip2.crossDrv}/include"
-           export NIX_CROSS_LDFLAGS="-L${bzip2.crossDrv}/lib -rpath-link ${bzip2.crossDrv}/lib $NIX_CROSS_LDFLAGS"
-        '';
-
-      configureFlags =
-        ''
-          --with-store-dir=${storeDir} --localstatedir=${stateDir}
-          --with-dbi=${perlPackages.DBI}/${perl.libPrefix}
-          --with-dbd-sqlite=${perlPackages.DBDSQLite}/${perl.libPrefix}
-          --with-www-curl=${perlPackages.WWWCurl}/${perl.libPrefix}
-          --disable-init-state
-          --enable-gc
-        '' + stdenv.lib.optionalString (
-            hostPlatform ? nix && hostPlatform.nix ? system
-        ) ''--with-system=${hostPlatform.nix.system}'';
-
-      doInstallCheck = false;
-    };
-
     enableParallelBuilding = true;
 
     meta = {
@@ -169,12 +134,12 @@ in rec {
 
   nixUnstable = (lib.lowPrio (common rec {
     name = "nix-2.0${suffix}";
-    suffix = "pre5914_48c192ca";
+    suffix = "pre5968_a6c0b773";
     src = fetchFromGitHub {
       owner = "NixOS";
       repo = "nix";
-      rev = "48c192ca2d5bc65b69d2336c8577258f8eb80cf8";
-      sha256 = "0xfb9dwyzdy31hbi5y9mlia8wsck2lay0f0phbfalgs4y7i3r3r1";
+      rev = "a6c0b773b72d4e30690e01f1f1dcffc28f2d9ea1";
+      sha256 = "0i8wcblcjw3291ba6ki4llw3fgm8ylp9q52kajkyr58dih537346";
     };
     fromGit = true;
   })) // { perl-bindings = perl-bindings { nix = nixUnstable; }; };
diff --git a/pkgs/tools/package-management/nixops/deps.nix b/pkgs/tools/package-management/nixops/deps.nix
new file mode 100644
index 000000000000..7da38f83e7fe
--- /dev/null
+++ b/pkgs/tools/package-management/nixops/deps.nix
@@ -0,0 +1,20 @@
+[
+  {
+    goPackagePath = "github.com/mattn/go-sqlite3";
+    fetch = {
+      type = "git";
+      url = "https://github.com/mattn/go-sqlite3";
+      rev = "b4142c444a8941d0d92b0b7103a24df9cd815e42";
+      sha256 = "0xq2y4am8dz9w9aaq24s1npg1sn8pf2gn4nki73ylz2fpjwq9vla";
+    };
+  }
+  {
+    goPackagePath = "github.com/miekg/dns";
+    fetch = {
+      type = "git";
+      url = "https://github.com/miekg/dns";
+      rev = "75229eecb7af00b2736e93b779a78429dcb19472";
+      sha256 = "1vsjy07kkyx11iz4qsihhykac3ddq3ywdgv6bwrv407504f7x6wl";
+    };
+  }
+]
diff --git a/pkgs/tools/package-management/nixops/nixops-dns.nix b/pkgs/tools/package-management/nixops/nixops-dns.nix
new file mode 100644
index 000000000000..afb0353e687d
--- /dev/null
+++ b/pkgs/tools/package-management/nixops/nixops-dns.nix
@@ -0,0 +1,26 @@
+{ lib
+, stdenv
+, buildGoPackage
+, fetchFromGitHub }:
+
+buildGoPackage rec {
+  name = "nixops-dns";
+  version = "1.0";
+
+  goDeps = ./deps.nix;
+  goPackagePath = "github.com/kamilchm/nixops-dns";
+
+  src = fetchFromGitHub {
+    owner = "kamilchm";
+    repo = "nixops-dns";
+    rev = "v${version}";
+    sha256 = "1fyqwk2knrv40zpf71a56bjyaycr3p6fzrqq7gaan056ydy83cai";
+  };
+
+  meta = with lib; {
+    homepage = https://github.com/kamilchm/nixops-dns/;
+    description = "DNS server for resolving NixOps machines";
+    license = licenses.mit;
+    maintainers = with maintainers; [ kamilchm sorki ];
+  };
+}
diff --git a/pkgs/tools/package-management/packagekit/default.nix b/pkgs/tools/package-management/packagekit/default.nix
index 78ef19706d18..4f027560547f 100644
--- a/pkgs/tools/package-management/packagekit/default.nix
+++ b/pkgs/tools/package-management/packagekit/default.nix
@@ -8,13 +8,13 @@
 
 stdenv.mkDerivation rec {
   name = "packagekit-${version}";
-  version = "1.1.7";
+  version = "1.1.8";
 
   src = fetchFromGitHub {
     owner = "hughsie";
     repo = "PackageKit";
     rev = "PACKAGEKIT_${lib.replaceStrings ["."] ["_"] version}";
-    sha256 = "076rrczmyhapj87pxqldsar5pbz4mid6cm9l1n91zh2q403chdkb";
+    sha256 = "0bn9flsjbzlwmlbv2gphqwgzy9sx8ahch28z6dzgak4csbz5wcws";
   };
 
   buildInputs = [ glib polkit systemd python gobjectIntrospection vala_0_38 ]
diff --git a/pkgs/tools/package-management/packagekit/qt.nix b/pkgs/tools/package-management/packagekit/qt.nix
new file mode 100644
index 000000000000..c38ef25f3548
--- /dev/null
+++ b/pkgs/tools/package-management/packagekit/qt.nix
@@ -0,0 +1,24 @@
+{ stdenv, lib, fetchFromGitHub, cmake, pkgconfig
+, qtbase, qttools, packagekit }:
+
+stdenv.mkDerivation rec {
+  name = "packagekit-qt-${version}";
+  version = "1.0.1";
+
+  src = fetchFromGitHub {
+    owner  = "hughsie";
+    repo   = "PackageKit-Qt";
+    rev    = "v${version}";
+    sha256 = "1ls6mn9abpwzw5wjgmslc5h9happj3516y1q67imppczk8g9h2yk";
+  };
+
+  buildInputs = [ packagekit ];
+
+  nativeBuildInputs = [ cmake pkgconfig qttools ];
+
+  enableParallelBuilding = true;
+
+  meta = packagekit.meta // {
+    description = "System to facilitate installing and updating packages - Qt";
+  };
+}
diff --git a/pkgs/tools/package-management/rpm/default.nix b/pkgs/tools/package-management/rpm/default.nix
index 57581091f921..3a56db1e0d3f 100644
--- a/pkgs/tools/package-management/rpm/default.nix
+++ b/pkgs/tools/package-management/rpm/default.nix
@@ -18,7 +18,8 @@ stdenv.mkDerivation rec {
   buildInputs = [ cpio zlib bzip2 file libarchive nspr nss db xz python lua ];
 
   # rpm/rpmlib.h includes popt.h, and then the pkg-config file mentions these as linkage requirements
-  propagatedBuildInputs = [ popt elfutils nss db bzip2 libarchive libbfd ];
+  propagatedBuildInputs = [ popt nss db bzip2 libarchive libbfd ]
+    ++ stdenv.lib.optional stdenv.isLinux elfutils;
 
   NIX_CFLAGS_COMPILE = "-I${nspr.dev}/include/nspr -I${nss.dev}/include/nss";
 
@@ -59,6 +60,6 @@ stdenv.mkDerivation rec {
     license = licenses.gpl2;
     description = "The RPM Package Manager";
     maintainers = with maintainers; [ copumpkin ];
-    platforms = platforms.linux;
+    platforms = platforms.linux ++ platforms.darwin;
   };
 }
diff --git a/pkgs/tools/security/afl/default.nix b/pkgs/tools/security/afl/default.nix
index 51701590b8e9..1ff0ad6f6b68 100644
--- a/pkgs/tools/security/afl/default.nix
+++ b/pkgs/tools/security/afl/default.nix
@@ -20,7 +20,7 @@ stdenv.mkDerivation rec {
 
   # Note: libcgroup isn't needed for building, just for the afl-cgroup
   # script.
-  buildInputs  = [ makeWrapper clang llvm which ];
+  buildInputs  = [ makeWrapper llvm which ];
 
   buildPhase   = ''
     make PREFIX=$out
@@ -53,8 +53,7 @@ stdenv.mkDerivation rec {
     for x in $out/bin/afl-clang-fast $out/bin/afl-clang-fast++; do
       wrapProgram $x \
         --prefix AFL_PATH : "$out/lib/afl" \
-        --prefix AFL_CC   : "${clang}/bin/clang" \
-        --prefix AFL_CXX  : "${clang}/bin/clang++"
+        --run 'export AFL_CC=''${AFL_CC:-${clang}/bin/clang} AFL_CXX=''${AFL_CXX:-${clang}/bin/clang++}'
     done
   '';
 
@@ -76,7 +75,7 @@ stdenv.mkDerivation rec {
     '';
     homepage    = "http://lcamtuf.coredump.cx/afl/";
     license     = stdenv.lib.licenses.asl20;
-    platforms   = stdenv.lib.platforms.linux;
+    platforms   = ["x86_64-linux" "i686-linux"];
     maintainers = [ stdenv.lib.maintainers.thoughtpolice ];
   };
 }
diff --git a/pkgs/tools/security/eschalot/default.nix b/pkgs/tools/security/eschalot/default.nix
new file mode 100644
index 000000000000..d628a28023a4
--- /dev/null
+++ b/pkgs/tools/security/eschalot/default.nix
@@ -0,0 +1,28 @@
+{ stdenv, fetchFromGitHub, openssl }:
+
+stdenv.mkDerivation rec {
+  pname = "eschalot";
+  version = "2018-01-19";
+  name = "${pname}-${version}";
+
+  src = fetchFromGitHub {
+    owner = "ReclaimYourPrivacy";
+    repo = pname;
+    rev = "56a967b62631cfd3c7ef68541263dbd54cbbc2c4";
+    sha256 = "1iw1jrydasm9dmgpcdimd8dy9n281ys9krvf3fd3dlymkgsj604d";
+  };
+
+  buildInputs = [ openssl ];
+
+  installPhase = ''
+    install -D -t $out/bin eschalot worgen
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Tor hidden service name generator";
+    homepage = src.meta.homepage;
+    license = licenses.isc;
+    platforms = platforms.unix;
+    maintainers = with maintainers; [ dotlambda ];
+  };
+}
diff --git a/pkgs/tools/security/hash_extender/default.nix b/pkgs/tools/security/hash_extender/default.nix
new file mode 100644
index 000000000000..0c5691a1e106
--- /dev/null
+++ b/pkgs/tools/security/hash_extender/default.nix
@@ -0,0 +1,27 @@
+{ stdenv, fetchFromGitHub, openssl }:
+
+stdenv.mkDerivation rec {
+  name = "hash_extender-${version}";
+  version = "2017-04-10";
+
+  src = fetchFromGitHub {
+    owner = "iagox86";
+    repo = "hash_extender";
+    rev = "d27581e062dd0b534074e11d7d311f65a6d7af21";
+    sha256 = "1npwbgqaynjh5x39halw43i116v89sxkpa1g1bbvc1lpi8hkhhcb";
+  };
+
+  buildInputs = [ openssl ];
+
+  installPhase = ''
+    mkdir -p $out/bin
+    cp hash_extender $out/bin
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Tool to automate hash length extension attacks";
+    homepage = https://github.com/iagox86/hash_extender;
+    license = licenses.bsd3;
+    maintainers = with maintainers; [ geistesk ];
+  };
+}
diff --git a/pkgs/tools/security/kbfs/default.nix b/pkgs/tools/security/kbfs/default.nix
index ba024328ba5f..dbd372275bc3 100644
--- a/pkgs/tools/security/kbfs/default.nix
+++ b/pkgs/tools/security/kbfs/default.nix
@@ -2,7 +2,7 @@
 
 buildGoPackage rec {
   name = "kbfs-${version}";
-  version = "20171004.40555d";
+  version = "1.0.40";
 
   goPackagePath = "github.com/keybase/kbfs";
   subPackages = [ "kbfsfuse" "kbfsgit/git-remote-keybase" ];
@@ -12,8 +12,8 @@ buildGoPackage rec {
   src = fetchFromGitHub {
     owner = "keybase";
     repo = "kbfs";
-    rev = "40555dbc9c93a05f3a82053860df30e45c7bd779";
-    sha256 = "08wj8fh1ja8kfzvbza5csy9mpfy39lifnzvfrnbj7vyyv88qc3h0";
+    rev = "v${version}";
+    sha256 = "1bgbzk3ykjb6y5sa5i9f6hwcp8b21dndq7iw9m8fdxh4n4mm6n9p";
   };
 
   buildFlags = [ "-tags production" ];
diff --git a/pkgs/tools/security/keybase-gui/default.nix b/pkgs/tools/security/keybase-gui/default.nix
index ce98740e89bd..b0db3eea5b9e 100644
--- a/pkgs/tools/security/keybase-gui/default.nix
+++ b/pkgs/tools/security/keybase-gui/default.nix
@@ -37,10 +37,10 @@ let
 in
 stdenv.mkDerivation rec {
   name = "keybase-gui-${version}";
-  version = "1.0.33-20171003193427.d9ceb86ac";
+  version = "1.0.40-20180127033950.76a4b90c9";
   src = fetchurl {
     url = "https://s3.amazonaws.com/prerelease.keybase.io/linux_binaries/deb/keybase_${version}_amd64.deb";
-    sha256 = "0sqani2fy5jzqmz35md1bdw2vwpx91l87b6s3x9z53halzq7vfy6";
+    sha256 = "1pskmwif5nx32d53kz8vbijv61i50kpjwyy53a37rz5nx3hgj3ar";
   };
   phases = ["unpackPhase" "installPhase" "fixupPhase"];
   unpackPhase = ''
@@ -48,7 +48,8 @@ stdenv.mkDerivation rec {
     tar xf data.tar.xz
   '';
   installPhase = ''
-    mkdir -p $out/{bin,share}
+    mkdir -p $out/bin
+    mv usr/share $out/share
     mv opt/keybase $out/share/
 
     cat > $out/bin/keybase-gui <<EOF
@@ -78,6 +79,9 @@ stdenv.mkDerivation rec {
     exec $out/share/keybase/Keybase "\$@"
     EOF
     chmod +x $out/bin/keybase-gui
+
+    substituteInPlace $out/share/applications/keybase.desktop \
+      --replace run_keybase $out/bin/keybase-gui
   '';
   postFixup = ''
     patchelf --set-interpreter $(cat $NIX_CC/nix-support/dynamic-linker) --set-rpath "${libPath}:\$ORIGIN" "$out/share/keybase/Keybase"
diff --git a/pkgs/tools/security/keybase/default.nix b/pkgs/tools/security/keybase/default.nix
index a0fc788a69e9..c221a46d5f96 100644
--- a/pkgs/tools/security/keybase/default.nix
+++ b/pkgs/tools/security/keybase/default.nix
@@ -2,7 +2,7 @@
 
 buildGoPackage rec {
   name = "keybase-${version}";
-  version = "1.0.39";
+  version = "1.0.40";
 
   goPackagePath = "github.com/keybase/client";
   subPackages = [ "go/keybase" ];
@@ -13,7 +13,7 @@ buildGoPackage rec {
     owner  = "keybase";
     repo   = "client";
     rev    = "v${version}";
-    sha256 = "0b64h536xp8r1q7fa23mf1p8ybnh0fz1n468fp56mvh98vmqys5b";
+    sha256 = "05x0h87dinl8zaqikr1sx38bv1n6ymxqp440b384d8y76w66rphi";
   };
 
   buildFlags = [ "-tags production" ];
diff --git a/pkgs/tools/security/nmap/qt.nix b/pkgs/tools/security/nmap/qt.nix
new file mode 100644
index 000000000000..c15d9bf25283
--- /dev/null
+++ b/pkgs/tools/security/nmap/qt.nix
@@ -0,0 +1,53 @@
+{ stdenv, fetchurl, cmake, pkgconfig, makeWrapper
+, dnsutils, nmap
+, qtbase, qtscript, qtwebkit }:
+
+stdenv.mkDerivation rec {
+  name = "nmapsi4-${version}";
+  version = "0.5-alpha1";
+
+  src = fetchurl {
+    url = "mirror://sourceforge/nmapsi/${name}.tar.xz";
+    sha256 = "18v9a3l2nmij3gb4flscigxr5c44nphkjfmk07qpyy73fy61mzrs";
+  };
+
+  nativeBuildInputs = [ cmake makeWrapper pkgconfig ];
+
+  buildInputs = [ qtbase qtscript qtwebkit ];
+
+  enableParallelBuilding = true;
+
+  postPatch = ''
+    for f in \
+      src/platform/digmanager.cpp \
+      src/platform/discover.cpp \
+      src/platform/monitor/monitor.cpp \
+      src/platform/nsemanager.cpp ; do
+
+      substituteInPlace $f \
+        --replace '"dig"'   '"${dnsutils}/bin/dig"'\
+        --replace '"nmap"'  '"${nmap}/bin/nmap"' \
+        --replace '"nping"' '"${nmap}/bin/nping"'
+    done
+  '';
+
+  postInstall = ''
+    mv $out/share/applications/kde4/*.desktop $out/share/applications
+    rmdir $out/share/applications/kde4
+
+    for f in $out/share/applications/* ; do
+      substituteInPlace $f \
+        --replace Qt4                   Qt5 \
+        --replace Exec=nmapsi4          Exec=$out/bin/nmapsi4 \
+        --replace "Exec=kdesu nmapsi4" "Exec=kdesu $out/bin/nmapsi4"
+    done
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Qt frontend for nmap";
+    homepage    = https://www.nmapsi4.org/;
+    license     = licenses.gpl2;
+    platforms   = platforms.all;
+    maintainers = with maintainers; [ peterhoeg ];
+  };
+}
diff --git a/pkgs/tools/security/rhash/darwin.patch b/pkgs/tools/security/rhash/darwin.patch
deleted file mode 100644
index 76ad8fe9abd9..000000000000
--- a/pkgs/tools/security/rhash/darwin.patch
+++ /dev/null
@@ -1,38 +0,0 @@
-diff --git a/Makefile b/Makefile
-index e40dbc3..e198b93 100644
---- a/Makefile
-+++ b/Makefile
-@@ -17,7 +17,7 @@ ALLCFLAGS = -pipe $(CFLAGS) $(ADDCFLAGS) \
-   -Wbad-function-cast -Wmissing-prototypes -Wmissing-declarations
- LDLIBRHASH = -Llibrhash -lrhash
- ALLLDFLAGS = $(LDLIBRHASH) $(LDFLAGS) $(ADDLDFLAGS)
--SHAREDLIB  = librhash/librhash.so.0
-+SHAREDLIB  = librhash/librhash.0.dylib
- SHRDLFLAGS = $(LDFLAGS) $(ADDLDFLAGS)
- HEADERS = calc_sums.h hash_print.h common_func.h hash_update.h file_mask.h file_set.h find_file.h hash_check.h output.h parse_cmdline.h rhash_main.h win_utils.h version.h
- SOURCES = calc_sums.c hash_print.c common_func.c hash_update.c file_mask.c file_set.c find_file.c hash_check.c output.c parse_cmdline.c rhash_main.c win_utils.c
-diff --git a/librhash/Makefile b/librhash/Makefile
-index 2f9bcc9..0c5aaad 100644
---- a/librhash/Makefile
-+++ b/librhash/Makefile
-@@ -28,8 +28,8 @@ PREFIX  = /usr/local
- INCDIR  = $(PREFIX)/include
- LIBDIR  = $(PREFIX)/lib
- LIBRARY = librhash.a
--SONAME  = librhash.so.0
--SOLINK  = librhash.so
-+SONAME  = librhash.0.dylib
-+SOLINK  = librhash.dylib
- TEST_TARGET = test_hashes
- TEST_SHARED = test_shared
- # Set variables according to GNU coding standard
-@@ -182,8 +182,7 @@ test-dll: $(DLLNAME) test_hashes.o
- 
- # shared and static libraries
- $(SONAME): $(SOURCES)
--	sed -n '1s/.*/{ global:/p; s/^RHASH_API.* \([a-z0-9_]\+\)(.*/  \1;/p; $$s/.*/local: *; };/p' $(SO_HEADERS) > exports.sym
--	$(CC) -fpic $(ALLCFLAGS) -shared $(SOURCES) -Wl,--version-script,exports.sym,-soname,$(SONAME) $(LIBLDFLAGS) -o $@
-+	$(CC) -fpic $(ALLCFLAGS) -dynamiclib $(SOURCES) $(LIBLDFLAGS) -Wl,-install_name,$(PREFIX)/lib/$@ -o $@
- 	ln -s $(SONAME) $(SOLINK)
- # use 'nm -Cg --defined-only $@' to view exported symbols
- 
diff --git a/pkgs/tools/security/rhash/default.nix b/pkgs/tools/security/rhash/default.nix
index 68c3edc4cd25..485b34cff88d 100644
--- a/pkgs/tools/security/rhash/default.nix
+++ b/pkgs/tools/security/rhash/default.nix
@@ -1,32 +1,23 @@
-{ stdenv, fetchurl }:
+{ stdenv, fetchFromGitHub, which }:
 
 stdenv.mkDerivation rec {
-  version = "1.3.3";
+  version = "2018-02-05";
   name = "rhash-${version}";
 
-  src = fetchurl {
-    url = "mirror://sourceforge/rhash/${name}-src.tar.gz";
-    sha1 = "0981bdc98ba7ef923b1a6cd7fd8bb0374cff632e";
-    sha256 = "0nii6p4m2x8rkaf8r6smgfwb1q4hpf117kkg64yr6gyqgdchnljv";
+  src = fetchFromGitHub {
+    owner = "rhash";
+    repo = "RHash";
+    rev = "cc26d54ff5df0f692907a5e3132a5eeca559ed61";
+    sha256 = "1ldagp931lmxxpyvsb9rrar4iqwmv94m6lfjzkbkshpmk3p5ng7h";
   };
 
-  patches = stdenv.lib.optional stdenv.isDarwin ./darwin.patch;
+  nativeBuildInputs = [ which ];
 
-  installFlags = [ "DESTDIR=$(out)" "PREFIX=/" ];
+  # configure script is not autotools-based, doesn't support these options
+  configurePlatforms = [ ];
 
-  # we build the static library because of two makefile bugs
-  # * .h files installed for static library target only
-  # * .so.0 -> .so link only created in the static library install target
-  buildPhase = ''
-    make lib-shared lib-static build-shared CC=$CC AR=$AR PREFIX=$out
-  '';
-
-  # we don't actually want the static library, so we remove it after it
-  # gets installed
-  installPhase = ''
-    make DESTDIR="$out" PREFIX="/" install-shared install-lib-shared install-lib-static
-    rm $out/lib/librhash.a
-  '';
+  installTargets = [ "install" "install-lib-shared" "install-lib-so-link" ];
+  postInstall = "make -C librhash install-headers";
 
   meta = with stdenv.lib; {
     homepage = http://rhash.anz.ru;
diff --git a/pkgs/tools/security/secp256k1/default.nix b/pkgs/tools/security/secp256k1/default.nix
index 83a23744c2e9..fd03e6bebabc 100644
--- a/pkgs/tools/security/secp256k1/default.nix
+++ b/pkgs/tools/security/secp256k1/default.nix
@@ -20,13 +20,13 @@ stdenv.mkDerivation rec {
 
   # I can't find any version numbers, so we're just using the date of the
   # last commit.
-  version = "2016-11-27";
+  version = "2017-12-18";
 
   src = fetchFromGitHub {
     owner = "bitcoin-core";
     repo = "secp256k1";
-    rev = "2928420c1b8e1feee8c20dff4e3cc41a0de2fc22";
-    sha256 = "1djsr2vrhh88353czlwb8bwlyabf008w1f7xg0fs3q33rf42w5gm";
+    rev = "f54c6c5083307b18224c953cf5870ea7ffce070b";
+    sha256 = "0bxqmimm627g9klalg1vdbspmn52588v4a6cli3p8bn84ibsnzbm";
   };
 
   buildInputs = optionals enableJNI [ jdk ];
@@ -34,6 +34,7 @@ stdenv.mkDerivation rec {
   nativeBuildInputs = [ autoreconfHook ];
 
   configureFlags =
+    [ "--enable-benchmark=no" "--enable-tests=no" "--enable-exhaustive-tests=no" ] ++
     optionals enableECDH [ "--enable-module-ecdh" "--enable-experimental" ] ++
     optionals enableRecovery [ "--enable-module-recovery" ] ++
     optionals enableJNI [ "--enable-jni" ];
diff --git a/pkgs/tools/security/sops/default.nix b/pkgs/tools/security/sops/default.nix
index 79753305c592..26faf2c730c6 100644
--- a/pkgs/tools/security/sops/default.nix
+++ b/pkgs/tools/security/sops/default.nix
@@ -2,7 +2,7 @@
 
 buildGoPackage rec {
   name = "sops-${version}";
-  version = "2.0.8";
+  version = "3.0.2";
 
   goPackagePath = "go.mozilla.org/sops";
 
@@ -10,7 +10,7 @@ buildGoPackage rec {
     rev = version;
     owner = "mozilla";
     repo = "sops";
-    sha256 = "0kawnp24i3r981hz6apfwhgp71002vjq7ir54arq0zkssmykms1c";
+    sha256 = "0zszlb35cmw9j9dg1bpcbwxwh094wcfxhas4ns58jp5n79rqwv9i";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/tools/security/spectre-meltdown-checker/default.nix b/pkgs/tools/security/spectre-meltdown-checker/default.nix
index d03c387a7c6c..13bebe10c623 100644
--- a/pkgs/tools/security/spectre-meltdown-checker/default.nix
+++ b/pkgs/tools/security/spectre-meltdown-checker/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   name = "spectre-meltdown-checker-${version}";
-  version = "0.34";
+  version = "0.35";
 
   src = fetchFromGitHub {
     owner = "speed47";
     repo = "spectre-meltdown-checker";
     rev = "v${version}";
-    sha256 = "0jlqxzii883yl5iqmywqqqjlhgswn033566a3vpspycj3sr8zrd2";
+    sha256 = "0pzs6iznrar5zkg92gsh6d0zhdi715zwqcb8hh1aaykx9igjb1xw";
   };
 
   prePatch = ''
diff --git a/pkgs/tools/security/sudo/default.nix b/pkgs/tools/security/sudo/default.nix
index 5192f57582c7..1edd5b60926f 100644
--- a/pkgs/tools/security/sudo/default.nix
+++ b/pkgs/tools/security/sudo/default.nix
@@ -28,6 +28,7 @@ stdenv.mkDerivation rec {
     "--with-logpath=/var/log/sudo.log"
     "--with-iologdir=/var/log/sudo-io"
     "--with-sendmail=${sendmailPath}"
+    "--enable-tmpfiles.d=no"
   ] ++ stdenv.lib.optional withInsults [
     "--with-insults"
     "--with-all-insults"
diff --git a/pkgs/tools/security/theharvester/default.nix b/pkgs/tools/security/theharvester/default.nix
new file mode 100644
index 000000000000..f1bac7adba10
--- /dev/null
+++ b/pkgs/tools/security/theharvester/default.nix
@@ -0,0 +1,41 @@
+{ stdenv, makeWrapper, python2Packages, fetchFromGitHub, python2 }:
+
+stdenv.mkDerivation rec {
+  pname = "theHarvester";
+  version = "2.7.1";
+  name = "${pname}-${version}";
+
+  src = fetchFromGitHub {
+    owner = "laramies";
+    repo = "${pname}";
+    rev = "25553762d2d93a39083593adb08a34d5f5142c60";
+    sha256 = "0gnm598y6paz0knwvdv1cx0w6ngdbbpzkdark3q5vs66yajv24w4";
+  };
+
+  nativeBuildInputs = [ makeWrapper ];
+
+  # add dependencies
+  propagatedBuildInputs = [ python2Packages.requests ];
+
+  installPhase = ''
+    # create dirs
+    mkdir -p $out/share/${pname} $out/bin
+
+    # move project code
+    mv * $out/share/${pname}/
+
+    # make project runnable
+    chmod +x $out/share/${pname}/theHarvester.py
+    ln -s $out/share/${pname}/theHarvester.py $out/bin
+
+    wrapProgram "$out/bin/theHarvester.py" --prefix PYTHONPATH : $out/share/${pname}:$PYTHONPATH
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Gather E-mails, subdomains and names from different public sources";
+    homepage = "https://github.com/laramies/theHarvester";
+    platforms = platforms.all;
+    maintainers = with maintainers; [ treemo ];
+    license = licenses.gpl2;
+  };
+}
diff --git a/pkgs/tools/system/acpica-tools/default.nix b/pkgs/tools/system/acpica-tools/default.nix
new file mode 100644
index 000000000000..1381f13fd3c5
--- /dev/null
+++ b/pkgs/tools/system/acpica-tools/default.nix
@@ -0,0 +1,36 @@
+{ stdenv, fetchurl, bison, flex }:
+
+stdenv.mkDerivation rec {
+  name = "acpica-tools-${version}";
+  version = "20180209";
+
+  src = fetchurl {
+    url = "https://acpica.org/sites/acpica/files/acpica-unix-${version}.tar.gz";
+    sha256 = "1rpdfwa4vwnvyxdp9ygqjckmabc3s8kyg3jyq4n4f0rhr1zl4zy5";
+  };
+
+  NIX_CFLAGS_COMPILE = "-O3";
+
+  enableParallelBuilding = true;
+
+  buildFlags = [
+    "acpibin"
+    "acpidump"
+    "acpiexec"
+    "acpihelp"
+    "acpinames"
+    "acpixtract"
+  ];
+
+  nativeBuildInputs = [ bison flex ];
+
+  installFlags = [ "PREFIX=$(out)" ];
+
+  meta = with stdenv.lib; {
+    description = "ACPICA Tools";
+    homepage = "https://www.acpica.org/";
+    license = with licenses; [ gpl2 bsd3 ];
+    platforms = platforms.linux;
+    maintainers = with maintainers; [ tadfisher ];
+  };
+}
diff --git a/pkgs/tools/system/augeas/default.nix b/pkgs/tools/system/augeas/default.nix
index dca6d37d9af3..93ce48644634 100644
--- a/pkgs/tools/system/augeas/default.nix
+++ b/pkgs/tools/system/augeas/default.nix
@@ -2,11 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "augeas-${version}";
-  version = "1.10.0";
+  version = "1.10.1";
 
   src = fetchurl {
     url = "http://download.augeas.net/${name}.tar.gz";
-    sha256 = "04q2hr3xj71rdbjdj3jiygi8dbiq1x4szlyavxj1xjiw9jcgd41a";
+    sha256 = "0k9nssn7lk58cl5zv3c8kv2zx9cm2yks3sj7q4fd6qdjz9m2bnsj";
   };
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ readline libxml2 ];
diff --git a/pkgs/tools/system/bfs/default.nix b/pkgs/tools/system/bfs/default.nix
new file mode 100644
index 000000000000..2e4133124c11
--- /dev/null
+++ b/pkgs/tools/system/bfs/default.nix
@@ -0,0 +1,38 @@
+{ stdenv, fetchFromGitHub, bash }:
+
+stdenv.mkDerivation rec {
+  name = "bfs-${version}";
+  version = "1.2.1";
+
+  src = fetchFromGitHub {
+    repo = "bfs";
+    owner = "tavianator";
+    rev = version;
+    sha256 = "1dgc31l5d20i0v78c51xga4lr78b5x8dz6yzsvbhlgs0abi0nynx";
+  };
+
+  # Disable fstype test, tries to read /etc/mtab
+  patches = [ ./tests.patch ];
+  postPatch = ''
+    # Patch tests (both shebangs and usage in scripts)
+    for f in $(find -type f -name '*.sh'); do
+      substituteInPlace $f --replace "/bin/bash" "${bash}/bin/bash"
+    done
+  '';
+  doCheck = true;
+
+  makeFlags = [ "PREFIX=$(out)" ];
+  buildFlags = [ "release" ]; # "release" enables compiler optimizations
+
+  meta = with stdenv.lib; {
+    description = "A breadth-first version of the UNIX find command";
+    longDescription = ''
+      bfs is a variant of the UNIX find command that operates breadth-first rather than
+      depth-first. It is otherwise intended to be compatible with many versions of find.
+    '';
+    homepage = https://github.com/tavianator/bfs;
+    license = licenses.bsd0;
+    platforms = platforms.linux;
+    maintainers = with maintainers; [ yesbox ];
+  };
+}
diff --git a/pkgs/tools/system/bfs/tests.patch b/pkgs/tools/system/bfs/tests.patch
new file mode 100644
index 000000000000..a30291d7095f
--- /dev/null
+++ b/pkgs/tools/system/bfs/tests.patch
@@ -0,0 +1,10 @@
+--- a/tests.sh
++++ b/tests.sh
+@@ -369,7 +369,6 @@
+     test_printf_nul
+     test_quit_after_print
+     test_quit_before_print
+-    test_fstype
+     test_not
+     test_and
+     test_or
diff --git a/pkgs/tools/system/ddrescue/default.nix b/pkgs/tools/system/ddrescue/default.nix
index e6af7abeda2b..fc42c3b856f6 100644
--- a/pkgs/tools/system/ddrescue/default.nix
+++ b/pkgs/tools/system/ddrescue/default.nix
@@ -6,11 +6,11 @@
 let inherit (stdenv.lib) optionals; in
 
 stdenv.mkDerivation rec {
-  name = "ddrescue-1.22";
+  name = "ddrescue-1.23";
 
   src = fetchurl {
     url = "mirror://gnu/ddrescue/${name}.tar.lz";
-    sha256 = "19qhx9ggkkjl0g3a88g501wmybkj1y4n5lm5kp0km0blh0p7p189";
+    sha256 = "13cd6c0x91zq10vdlyl6r5rib47bmsn5sshmkin3igwj8pa2vbm9";
   };
 
   nativeBuildInputs = [ lzip ];
diff --git a/pkgs/tools/system/efivar/default.nix b/pkgs/tools/system/efivar/default.nix
index 6b062513483d..7f20e8135011 100644
--- a/pkgs/tools/system/efivar/default.nix
+++ b/pkgs/tools/system/efivar/default.nix
@@ -2,27 +2,21 @@
 
 stdenv.mkDerivation rec {
   name = "efivar-${version}";
-  version = "30";
+  version = "34";
 
   src = fetchFromGitHub {
     owner = "rhinstaller";
     repo = "efivar";
     rev = version;
-    sha256 = "1pghj019qr7qpqd9rxfhsr1hm3s0w1hd5cdndpl07vhys8hy4a8a";
+    sha256 = "0ycrdaz0ijkm3xb9fnwzhwi0pdj5c6s636wj4i6lbjbrijbzn4x5";
   };
 
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ popt ];
 
-  postPatch = ''
-     substituteInPlace src/Makefile --replace "-static" ""
-  '';
-
-  installFlags = [
+  makeFlags = [
+    "prefix=$(out)"
     "libdir=$(out)/lib"
-    "mandir=$(out)/share/man"
-    "includedir=$(out)/include"
-    "bindir=$(out)/bin"
   ];
 
   meta = with stdenv.lib; {
diff --git a/pkgs/tools/system/fio/default.nix b/pkgs/tools/system/fio/default.nix
index 89fb5f05ac97..1c98f7126937 100644
--- a/pkgs/tools/system/fio/default.nix
+++ b/pkgs/tools/system/fio/default.nix
@@ -1,8 +1,8 @@
 { stdenv, fetchFromGitHub, libaio, python, zlib }:
 
 let
-  version = "3.3";
-  sha256 = "0ipdpdn6rlsbppqjddyyk8c6rg1dl17d62dwwm0ijybi0m7imy1p";
+  version = "3.4";
+  sha256 = "0img4288ygil36bsgpr4yh06zfbp3mdkf7zbyqjcrjgpr4mai9zf";
 in
 
 stdenv.mkDerivation rec {
diff --git a/pkgs/tools/system/hardlink/default.nix b/pkgs/tools/system/hardlink/default.nix
index ea062115402d..57e3e63ca896 100644
--- a/pkgs/tools/system/hardlink/default.nix
+++ b/pkgs/tools/system/hardlink/default.nix
@@ -6,7 +6,7 @@ stdenv.mkDerivation rec {
   version = "1.3-4";
 
   src = fetchurl {
-    url = "http://pkgs.fedoraproject.org/cgit/rpms/hardlink.git/snapshot/hardlink-aa6325ac4e8100b8ac7d38c7f0bc2708e69bd855.tar.xz";
+    url = "http://src.fedoraproject.org/cgit/rpms/hardlink.git/snapshot/hardlink-aa6325ac4e8100b8ac7d38c7f0bc2708e69bd855.tar.xz";
     sha256 = "0g4hyrnd9hpykbf06qvvp3s4yyk7flbd95gilkf7r3w9vqiagvs2";
   };
 
@@ -26,7 +26,7 @@ stdenv.mkDerivation rec {
   meta = with stdenv.lib; {
     description = "Consolidate duplicate files via hardlinks";
     homepage = https://pagure.io/hardlink;
-    repositories.git = http://pkgs.fedoraproject.org/cgit/rpms/hardlink.git;
+    repositories.git = http://src.fedoraproject.org/cgit/rpms/hardlink.git;
     license = licenses.gpl2Plus;
     platforms = platforms.unix;
   };
diff --git a/pkgs/tools/system/htop/default.nix b/pkgs/tools/system/htop/default.nix
index 750ff8e59ef2..992067da50f4 100644
--- a/pkgs/tools/system/htop/default.nix
+++ b/pkgs/tools/system/htop/default.nix
@@ -1,19 +1,24 @@
 { lib, fetchurl, stdenv, ncurses,
-IOKit }:
+IOKit, python }:
 
 stdenv.mkDerivation rec {
   name = "htop-${version}";
-  version = "2.0.2";
+  version = "2.1.0";
 
   src = fetchurl {
-    sha256 = "11zlwadm6dpkrlfvf3z3xll26yyffa7qrxd1w72y1kl0rgffk6qp";
     url = "http://hisham.hm/htop/releases/${version}/${name}.tar.gz";
+    sha256 = "0j07z0xm2gj1vzvbgh4323k4db9mr7drd7gw95mmpqi61ncvwq1j";
   };
 
+  nativeBuildInputs = [ python ];
   buildInputs =
     [ ncurses ] ++
     lib.optionals stdenv.isDarwin [ IOKit ];
 
+  prePatch = ''
+    patchShebangs scripts/MakeHeader.py
+  '';
+
   meta = with stdenv.lib; {
     description = "An interactive process viewer for Linux";
     homepage = https://hisham.hm/htop/;
diff --git a/pkgs/tools/system/pciutils/default.nix b/pkgs/tools/system/pciutils/default.nix
index 1139c49ddf80..3cd00b3394cf 100644
--- a/pkgs/tools/system/pciutils/default.nix
+++ b/pkgs/tools/system/pciutils/default.nix
@@ -11,7 +11,7 @@ stdenv.mkDerivation rec {
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ zlib kmod which ];
 
-  makeFlags = "SHARED=yes PREFIX=\${out}";
+  makeFlags = [ "SHARED=yes" "PREFIX=\${out}" "STRIP=" "HOST=${stdenv.hostPlatform.system}" "CROSS_COMPILE=${stdenv.cc.targetPrefix}" ];
 
   installTargets = "install install-lib";
 
diff --git a/pkgs/tools/system/smartmontools/default.nix b/pkgs/tools/system/smartmontools/default.nix
index 5fa55b275fe1..e5b2d54e585d 100644
--- a/pkgs/tools/system/smartmontools/default.nix
+++ b/pkgs/tools/system/smartmontools/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, autoreconfHook
+{ stdenv, fetchurl, fetchpatch, autoreconfHook
 , IOKit ? null , ApplicationServices ? null }:
 
 let
@@ -20,7 +20,14 @@ in stdenv.mkDerivation rec {
     sha256 = "0m1hllbb78rr6cxkbalmz1gqkl0psgq8rrmv4gwcmz34n07kvx2i";
   };
 
-  patches = [ ./smartmontools.patch ];
+  patches = [ ./smartmontools.patch ]
+    # https://www.smartmontools.org/changeset/4603
+    ++ stdenv.lib.optional stdenv.hostPlatform.isMusl (fetchpatch {
+      name = "musl-canonicalize_file_name.patch";
+      url = "https://www.smartmontools.org/changeset/4603?format=diff&new=4603";
+      sha256 = "06s9pcd95snjkrbfrsjby2lln3lnwjd21bgabmvr4p7fx19b75zp";
+      stripLen = 2;
+    });
   postPatch = "cp -v ${driverdb} drivedb.h";
 
   nativeBuildInputs = [ autoreconfHook ];
diff --git a/pkgs/tools/system/supervise/default.nix b/pkgs/tools/system/supervise/default.nix
index c264b73b5023..81e3a2b8792b 100644
--- a/pkgs/tools/system/supervise/default.nix
+++ b/pkgs/tools/system/supervise/default.nix
@@ -3,11 +3,11 @@
 stdenv.mkDerivation rec {
 
   name = "supervise-${version}";
-  version = "1.2.0";
+  version = "1.4.0";
 
   src = fetchzip {
     url = "https://github.com/catern/supervise/releases/download/v${version}/supervise-${version}.tar.gz";
-    sha256 = "07v3197nf3jbx2w6jxzyk9b8p5qjj9irpr4jvv5lkfbi7s6rav3k";
+    sha256 = "0jk6q2f67pfs18ah040lmsbvbrnjap7w04jjddsfn1j5bcrvs13x";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/tools/text/agrep/default.nix b/pkgs/tools/text/agrep/default.nix
index 5d6eed458c0d..10d3a47cc85e 100644
--- a/pkgs/tools/text/agrep/default.nix
+++ b/pkgs/tools/text/agrep/default.nix
@@ -12,6 +12,10 @@ stdenv.mkDerivation rec {
     sha256 = "14addnwspdf2mxpqyrw8b84bb2257y43g5ccy4ipgrr91fmxq2sk";
   };
 
+  # Related: https://github.com/Wikinaut/agrep/pull/11
+  prePatch = stdenv.lib.optionalString (stdenv.hostPlatform.isMusl || stdenv.isDarwin) ''
+    sed -i '1i#include <sys/stat.h>' checkfil.c newmgrep.c recursiv.c
+  '';
   installPhase = ''
     install -Dm 555 agrep -t "$out/bin"
     install -Dm 444 docs/* -t "$out/doc"
diff --git a/pkgs/tools/text/catdocx/default.nix b/pkgs/tools/text/catdocx/default.nix
new file mode 100644
index 000000000000..adf9d17815b0
--- /dev/null
+++ b/pkgs/tools/text/catdocx/default.nix
@@ -0,0 +1,30 @@
+{ stdenv, lib, fetchFromGitHub, makeWrapper, unzip, catdoc }:
+
+stdenv.mkDerivation {
+  name = "catdocx-20170102";
+
+  src = fetchFromGitHub {
+    owner = "jncraton";
+    repo = "catdocx";
+    rev = "04fa0416ec1f116d4996685e219f0856d99767cb";
+    sha256 = "1sxiqhkvdqn300ygfgxdry2dj2cqzjhkzw13c6349gg5vxfypcjh";
+  };
+
+  nativeBuildInputs = [ makeWrapper ];
+
+  installPhase = ''
+    mkdir -p $out/libexec $out/bin
+    cp catdocx.sh $out/libexec
+    chmod +x $out/libexec/catdocx.sh
+    wrapProgram $out/libexec/catdocx.sh --prefix PATH : "${lib.makeBinPath [ unzip catdoc ]}"
+    ln -s $out/libexec/catdocx.sh $out/bin/catdocx
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Extracts plain text from docx files";
+    homepage = https://github.com/jncraton/catdocx;
+    license = with licenses; [ bsd3 ];
+    maintainers = [ maintainers.michalrus ];
+    platforms = platforms.all;
+  };
+}
diff --git a/pkgs/tools/text/fanficfare/default.nix b/pkgs/tools/text/fanficfare/default.nix
index 37447d0fb2ae..2af9baeb5c51 100644
--- a/pkgs/tools/text/fanficfare/default.nix
+++ b/pkgs/tools/text/fanficfare/default.nix
@@ -1,13 +1,13 @@
 { stdenv, fetchurl, python27Packages }:
 
 python27Packages.buildPythonApplication rec {
-  version = "2.16.0";
+  version = "2.22.0";
   name = "fanficfare-${version}";
   nameprefix = "";
 
   src = fetchurl {
     url = "https://github.com/JimmXinu/FanFicFare/archive/v${version}.tar.gz";
-    sha256 = "0c31z7w4b3wz5nahsmnfhvp3srprfsqbp3zyngw4cqw3dm17kvvi";
+    sha256 = "1gwr2qk0wff8f69w21ffj6cq8jklqd89vcdhhln6ii1h1kf8k031";
   };
 
   propagatedBuildInputs = with python27Packages; [ beautifulsoup4 chardet html5lib html2text ];
diff --git a/pkgs/tools/text/gnupatch/default.nix b/pkgs/tools/text/gnupatch/default.nix
index dfdb25438cfe..3840811a3e36 100644
--- a/pkgs/tools/text/gnupatch/default.nix
+++ b/pkgs/tools/text/gnupatch/default.nix
@@ -4,11 +4,11 @@
 }:
 
 stdenv.mkDerivation rec {
-  name = "patch-2.7.5";
+  name = "patch-2.7.6";
 
   src = fetchurl {
     url = "mirror://gnu/patch/${name}.tar.xz";
-    sha256 = "16d2r9kpivaak948mxzc0bai45mqfw73m113wrkmbffnalv1b5gx";
+    sha256 = "1zfqy4rdcy279vwn2z1kbv19dcfw25d2aqy9nzvdkq5bjzd0nqdc";
   };
 
   buildInputs = stdenv.lib.optional doCheck ed;
@@ -17,7 +17,7 @@ stdenv.mkDerivation rec {
     "ac_cv_func_strnlen_working=yes"
   ];
 
-  doCheck = true; # not cross;
+  doCheck = hostPlatform.libc != "musl"; # not cross;
 
   meta = {
     description = "GNU Patch, a program to apply differences to files";
diff --git a/pkgs/tools/text/groff/default.nix b/pkgs/tools/text/groff/default.nix
index b11f3cb4b8cd..6d01c42f93d1 100644
--- a/pkgs/tools/text/groff/default.nix
+++ b/pkgs/tools/text/groff/default.nix
@@ -2,6 +2,7 @@
 , ghostscript #for postscript and html output
 , psutils, netpbm #for html output
 , buildPackages
+, autoreconfHook
 }:
 
 stdenv.mkDerivation rec {
@@ -17,6 +18,8 @@ stdenv.mkDerivation rec {
 
   enableParallelBuilding = false;
 
+  patches = [ ./look-for-ar.patch ];
+
   postPatch = stdenv.lib.optionalString (psutils != null) ''
     substituteInPlace src/preproc/html/pre-html.cpp \
       --replace "psselect" "${psutils}/bin/psselect"
@@ -32,6 +35,7 @@ stdenv.mkDerivation rec {
   '';
 
   buildInputs = [ ghostscript psutils netpbm perl ];
+  nativeBuildInputs = [ autoreconfHook ];
 
   # Builds running without a chroot environment may detect the presence
   # of /usr/X11 in the host system, leading to an impure build of the
@@ -42,6 +46,8 @@ stdenv.mkDerivation rec {
     "--without-x"
   ] ++ stdenv.lib.optionals (ghostscript != null) [
     "--with-gs=${ghostscript}/bin/gs"
+  ] ++ stdenv.lib.optionals (stdenv.buildPlatform != stdenv.hostPlatform) [
+    "ac_cv_path_PERL=${perl}/bin/perl"
   ];
 
   doCheck = true;
diff --git a/pkgs/tools/text/groff/look-for-ar.patch b/pkgs/tools/text/groff/look-for-ar.patch
new file mode 100644
index 000000000000..3b4d09c260fa
--- /dev/null
+++ b/pkgs/tools/text/groff/look-for-ar.patch
@@ -0,0 +1,39 @@
+commit 988a001f969262089579958827652da00fda096f
+Author: Ben Gamari <ben@smart-cactus.org>
+Date:   Tue Oct 17 16:15:20 2017 -0400
+
+    Look for AR
+
+diff --git a/Makefile.in b/Makefile.in
+index bc156ce..cc02126 100644
+--- a/Makefile.in
++++ b/Makefile.in
+@@ -464,7 +464,7 @@ INSTALL_SCRIPT=@INSTALL_SCRIPT@
+ INSTALL_DATA=@INSTALL_DATA@
+ INSTALL_INFO=@INSTALL_INFO@
+ LN_S=@LN_S@
+-AR=ar
++AR=@AR@
+ ETAGS=etags
+ ETAGSFLAGS=
+ # Flag that tells etags to assume C++.
+diff --git a/configure.ac b/configure.ac
+index c779165..6d53f5e 100644
+--- a/configure.ac
++++ b/configure.ac
+@@ -45,6 +45,7 @@ AC_PREREQ([2.62])
+ 
+ AC_CONFIG_HEADERS([src/include/config.h:src/include/config.hin])
+ AC_CONFIG_SRCDIR([src/roff/groff/groff.cpp])
++AC_CONFIG_MACRO_DIR([m4])
+ 
+ AC_USE_SYSTEM_EXTENSIONS
+ 
+@@ -73,6 +74,7 @@ GROFF_PROG_YACC
+ GROFF_DOC_CHECK
+ GROFF_MAKEINFO
+ AC_PROG_RANLIB
++AC_CHECK_TOOL([AR], [ar], [ar])
+ GROFF_INSTALL_SH
+ GROFF_INSTALL_INFO
+ AC_PROG_INSTALL
diff --git a/pkgs/tools/text/replace/default.nix b/pkgs/tools/text/replace/default.nix
index 2719a4c81915..9242014cdca5 100644
--- a/pkgs/tools/text/replace/default.nix
+++ b/pkgs/tools/text/replace/default.nix
@@ -8,6 +8,8 @@ stdenv.mkDerivation {
     sha256 = "1c2nkxx83vmlh1v3ib6r2xqh121gdb1rharwsimcb2h0xwc558dm";
   };
 
+  outputs = [ "out" "man" ];
+
   makeFlags = "TREE=\$(out) MANTREE=\$(TREE)/share/man";
 
   preBuild = ''
diff --git a/pkgs/tools/text/ripgrep/default.nix b/pkgs/tools/text/ripgrep/default.nix
index 9a93ec2d7674..11355bb6df1d 100644
--- a/pkgs/tools/text/ripgrep/default.nix
+++ b/pkgs/tools/text/ripgrep/default.nix
@@ -1,23 +1,28 @@
-{ stdenv, fetchFromGitHub, rustPlatform, makeWrapper }:
+{ stdenv, fetchFromGitHub, rustPlatform, makeWrapper, asciidoc, docbook_xsl, libxslt  }:
 
-with rustPlatform;
-
-buildRustPackage rec {
+rustPlatform.buildRustPackage rec {
   name = "ripgrep-${version}";
-  version = "0.7.1";
+  version = "0.8.1";
 
   src = fetchFromGitHub {
     owner = "BurntSushi";
     repo = "ripgrep";
     rev = "${version}";
-    sha256 = "0z3f83vhy464k93bc55i9lr6z41163q96if938p9ndhx2q3a20ql";
+    sha256 = "1h7k9ik723qzplwl0a5i0anzdr115wwklfgp0n11p4k2ckh7nygn";
   };
 
-  cargoSha256 = "1d6s01gmyfzb0vdf7flq6nvlapwcgbj0mzcprzyg4nj5gjkvznrn";
+  cargoSha256 = "1gld93dxfm4vyiz1b43smbdhxmyzdk2236ksp8vw1zb1yyzn83nf";
+
+  nativeBuildInputs = [ asciidoc docbook_xsl libxslt ];
 
   preFixup = ''
     mkdir -p "$out/man/man1"
-    cp "$src/doc/rg.1" "$out/man/man1"
+    cp target/release/build/ripgrep-*/out/rg.1 "$out/man/man1/"
+
+    mkdir -p "$out/share/"{bash-completion/completions,fish/vendor_completions.d,zsh/site-functions}
+    cp target/release/build/ripgrep-*/out/rg.bash "$out/share/bash-completion/completions/"
+    cp target/release/build/ripgrep-*/out/rg.fish "$out/share/fish/vendor_completions.d/"
+    cp "$src/complete/_rg" "$out/share/zsh/site-functions/"
   '';
 
   meta = with stdenv.lib; {
diff --git a/pkgs/tools/text/shocco/default.nix b/pkgs/tools/text/shocco/default.nix
new file mode 100644
index 000000000000..97c677a7f701
--- /dev/null
+++ b/pkgs/tools/text/shocco/default.nix
@@ -0,0 +1,28 @@
+{ stdenv, fetchFromGitHub, perlPackages, pythonPackages }:
+
+stdenv.mkDerivation rec {
+  name = "shocco-${version}";
+  version = "1.0";
+
+  src = fetchFromGitHub {
+    owner = "rtomayko";
+    repo = "shocco";
+    rev = version;
+    sha256 = "1nkwcw9fqf4vyrwidqi6by7nrmainkjqkirkz3yxmzk6kzwr38mi";
+  };
+
+  prePatch = ''
+    # Don't change $PATH
+    substituteInPlace configure --replace PATH= NIRVANA=
+  '';
+
+  buildInputs = [ perlPackages.TextMarkdown pythonPackages.pygments ];
+
+  meta = with stdenv.lib; {
+    description = "A quick-and-dirty, literate-programming-style documentation generator for / in POSIX shell";
+    homepage = https://rtomayko.github.io/shocco/;
+    license = licenses.mit;
+    platforms = platforms.all;
+    maintainers = with maintainers; [ dotlambda ];
+  };
+}
diff --git a/pkgs/tools/typesetting/asciidoctor/default.nix b/pkgs/tools/typesetting/asciidoctor/default.nix
index f494f1911593..02b57ee3a13b 100644
--- a/pkgs/tools/typesetting/asciidoctor/default.nix
+++ b/pkgs/tools/typesetting/asciidoctor/default.nix
@@ -1,12 +1,18 @@
-{ stdenv, lib, bundlerEnv, ruby, curl }:
-
-bundlerEnv {
-  pname = "asciidoctor";
+{ stdenv, lib, bundlerApp, ruby, curl }:
 
+bundlerApp {
   inherit ruby;
-
+  pname = "asciidoctor";
   gemdir = ./.;
 
+  exes = [
+    "asciidoctor"
+    "asciidoctor-bespoke"
+    "asciidoctor-latex"
+    "asciidoctor-pdf"
+    "asciidoctor-safe"
+  ];
+
   meta = with lib; {
     description = "A faster Asciidoc processor written in Ruby";
     homepage = http://asciidoctor.org/;
diff --git a/pkgs/tools/video/flvtool2/default.nix b/pkgs/tools/video/flvtool2/default.nix
index 9a60ebf17be8..dab4bf44a6f9 100644
--- a/pkgs/tools/video/flvtool2/default.nix
+++ b/pkgs/tools/video/flvtool2/default.nix
@@ -1,13 +1,14 @@
-{ buildRubyGem, lib, ruby_2_2 }:
+{ buildRubyGem, lib, ruby }:
 
 buildRubyGem rec {
-  ruby = ruby_2_2;
+  inherit ruby;
   name = "${gemName}-${version}";
   gemName = "flvtool2";
   version = "1.0.6";
   source.sha256 = "0xsla1061pi4ryh3jbvwsbs8qchprchbqjy7652g2g64v37i74qj";
 
   meta = {
+    broken = true; # depends on ruby 2.2
     homepage = https://github.com/unnu/flvtool2;
     description = "A tool to manipulate Macromedia Flash Video files";
     platforms = ruby.meta.platforms;
diff --git a/pkgs/tools/virtualization/awsebcli/default.nix b/pkgs/tools/virtualization/awsebcli/default.nix
index 25752afd995b..f380b62e6a49 100644
--- a/pkgs/tools/virtualization/awsebcli/default.nix
+++ b/pkgs/tools/virtualization/awsebcli/default.nix
@@ -34,16 +34,6 @@ let
           };
         });
 
-      pathspec = super.pathspec.overridePythonAttrs (oldAttrs: rec {
-        version = "0.5.0";
-
-        src = super.fetchPypi {
-          inherit (oldAttrs) pname;
-          inherit version;
-          sha256 = "07yx1gxj9v1iyyiy5fhq2wsmh4qfbrx158wi7jb0nx6lah80ffma";
-        };
-      });
-
       requests = super.requests.overridePythonAttrs (oldAttrs: rec {
         version = "2.9.1";
 
@@ -77,11 +67,11 @@ let
 in with localPython.pkgs; buildPythonApplication rec {
   name = "${pname}-${version}";
   pname = "awsebcli";
-  version = "3.12.1";
+  version = "3.12.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "12v3zz69iql4ggiz9x7h27vyq9y9jlm46yczxyg62j89m2iyr5bl";
+    sha256 = "0jj6xhvsrgvc5pm05zbd95zvx36ssywq70j6q1kzcdv1flfzzyp9";
   };
 
   checkInputs = [
diff --git a/pkgs/tools/virtualization/govc/default.nix b/pkgs/tools/virtualization/govc/default.nix
new file mode 100644
index 000000000000..527c47ffc34c
--- /dev/null
+++ b/pkgs/tools/virtualization/govc/default.nix
@@ -0,0 +1,24 @@
+{ lib, fetchFromGitHub, buildGoPackage }:
+  
+buildGoPackage rec {
+  name = "govc-${version}";
+  version = "0.16.0";
+
+  goPackagePath = "github.com/vmware/govmomi";
+
+  subPackages = [ "govc" ];
+
+  src = fetchFromGitHub {
+    rev = "v${version}";
+    owner = "vmware";
+    repo = "govmomi";
+    sha256 = "09fllx7l2hsjrv1jl7g06xngjy0xwn5n5zng6x8dspgsl6kblyqp";
+  };
+
+  meta = {
+    description = "A vSphere CLI built on top of govmomi";
+    homepage = https://github.com/vmware/govmomi/tree/master/govc;
+    license = lib.licenses.asl20;
+    maintainers = with lib.maintainers; [ nicknovitski ];
+  };
+}
diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix
index 68c4a3c4acb5..8da6bcef4957 100644
--- a/pkgs/top-level/aliases.nix
+++ b/pkgs/top-level/aliases.nix
@@ -122,6 +122,7 @@ mapAliases (rec {
   nmap_graphical = nmap-graphical;  # added 2017-01-19
   nfsUtils = nfs-utils;  # added 2014-12-06
   opencl-icd = ocl-icd; # added 2017-01-20
+  openssh_with_kerberos = openssh; # added 2018-01-28
   owncloudclient = owncloud-client;  # added 2016-08
   pgp-tools = signing-party; # added 2017-03-26
   pidgin-with-plugins = pidgin; # added 2016-06
@@ -146,7 +147,12 @@ mapAliases (rec {
   rdmd = dtools;  # added 2017-08-19
   robomongo = robo3t; #added 2017-09-28
   rssglx = rss-glx; #added 2015-03-25
-  openssh_with_kerberos = openssh; # added 2018-01-28
+  ruby_2_0_0 = throw "deprecated 2018-0213: use a newer version of ruby";
+  ruby_2_1_0 = throw "deprecated 2018-0213: use a newer version of ruby";
+  ruby_2_2_9 = throw "deprecated 2018-0213: use ruby_2_2 instead";
+  ruby_2_3_6 = throw "deprecated 2018-0213: use ruby_2_3 instead";
+  ruby_2_4_3 = throw "deprecated 2018-0213: use ruby_2_4 instead";
+  ruby_2_5_0 = throw "deprecated 2018-0213: use ruby_2_5 instead";
   rubygems = throw "deprecated 2016-03-02: rubygems is now bundled with ruby";
   rxvt_unicode_with-plugins = rxvt_unicode-with-plugins; # added 2015-04-02
   samsungUnifiedLinuxDriver = samsung-unified-linux-driver; # added 2016-01-25
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 4544eb15cf68..b20aef04c41a 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -79,6 +79,10 @@ with pkgs;
     { deps = [ autoconf264 automake111x gettext libtool ]; }
     ../build-support/setup-hooks/autoreconf.sh;
 
+  autoPatchelfHook = makeSetupHook
+    { deps = [ file ]; }
+    ../build-support/setup-hooks/auto-patchelf.sh;
+
   ensureNewerSourcesHook = { year }: makeSetupHook {}
     (writeScript "ensure-newer-sources-hook.sh" ''
       postUnpackHooks+=(_ensureNewerSources)
@@ -88,10 +92,19 @@ with pkgs;
       }
     '');
 
+  # Zip file format only allows times after year 1980, which makes e.g. Python wheel building fail with:
+  # ValueError: ZIP does not support timestamps before 1980
+  ensureNewerSourcesForZipFilesHook = ensureNewerSourcesHook { year = "1980"; };
+
   updateAutotoolsGnuConfigScriptsHook = makeSetupHook
     { substitutions = { gnu_config = gnu-config;}; }
     ../build-support/setup-hooks/update-autotools-gnu-config-scripts.sh;
 
+  gogUnpackHook = makeSetupHook {
+    name = "gog-unpack-hook";
+    deps = [ innoextract file-rename ]; }
+    ../build-support/setup-hooks/gog-unpack.sh;
+
   buildEnv = callPackage ../build-support/buildenv { }; # not actually a package
 
   buildFHSUserEnv = callPackage ../build-support/build-fhs-userenv { };
@@ -158,6 +171,8 @@ with pkgs;
 
   fetchMavenArtifact = callPackage ../build-support/fetchmavenartifact { };
 
+  graph-easy = callPackage ../tools/graphics/graph-easy { };
+
   packer = callPackage ../development/tools/packer { };
 
   mht2htm = callPackage ../tools/misc/mht2htm { };
@@ -180,7 +195,7 @@ with pkgs;
 
   # `fetchurl' downloads a file from the network.
   fetchurl = import ../build-support/fetchurl {
-    inherit stdenvNoCC;
+    inherit lib stdenvNoCC;
     # On darwin, libkrb5 needs bootstrap_cmds which would require
     # converting many packages to fetchurl_boot to avoid evaluation cycles.
     curl = buildPackages.curl.override (lib.optionalAttrs stdenv.isDarwin { gssSupport = false; });
@@ -305,9 +320,9 @@ with pkgs;
   makeWrapper = makeSetupHook { deps = [ dieHook ]; }
                               ../build-support/setup-hooks/make-wrapper.sh;
 
-  makeModulesClosure = { kernel, rootModules, allowMissing ? false }:
+  makeModulesClosure = { kernel, firmware, rootModules, allowMissing ? false }:
     callPackage ../build-support/kernel/modules-closure.nix {
-      inherit kernel rootModules allowMissing;
+      inherit kernel firmware rootModules allowMissing;
     };
 
   mkShell = callPackage ../build-support/mkshell { };
@@ -392,6 +407,8 @@ with pkgs;
     ffmpeg = ffmpeg_1;
   };
 
+  acpica-tools = callPackage ../tools/system/acpica-tools { };
+
   actdiag = pythonPackages.actdiag;
 
   actkbd = callPackage ../tools/system/actkbd { };
@@ -414,6 +431,8 @@ with pkgs;
 
   aescrypt = callPackage ../tools/misc/aescrypt { };
 
+  acme-client = callPackage ../tools/networking/acme-client { inherit (darwin) apple_sdk; };
+
   afew = callPackage ../applications/networking/mailreaders/afew { pythonPackages = python3Packages; };
 
   afio = callPackage ../tools/archivers/afio { };
@@ -472,6 +491,8 @@ with pkgs;
 
   apulse = callPackage ../misc/apulse { };
 
+  libpressureaudio = callPackage ../misc/apulse/pressureaudio.nix { };
+
   archivemount = callPackage ../tools/filesystems/archivemount { };
 
   arandr = callPackage ../tools/X11/arandr { };
@@ -527,10 +548,6 @@ with pkgs;
 
   atomicparsley = callPackage ../tools/video/atomicparsley { };
 
-  attic = callPackage ../tools/backup/attic {
-    python3Packages = python34Packages;
-  };
-
   autoflake = callPackage ../development/tools/analysis/autoflake { };
 
   avfs = callPackage ../tools/filesystems/avfs { };
@@ -670,6 +687,13 @@ with pkgs;
 
   androidsdk_extras = self.androidenv.androidsdk_8_0_extras;
 
+  webos = recurseIntoAttrs {
+    cmake-modules = callPackage ../development/mobile/webos/cmake-modules.nix { };
+
+    novacom = callPackage ../development/mobile/webos/novacom.nix { };
+    novacomd = callPackage ../development/mobile/webos/novacomd.nix { };
+  };
+
   arc-theme = callPackage ../misc/themes/arc { };
 
   arc-kde-theme = callPackage ../misc/themes/arc-kde { };
@@ -809,7 +833,7 @@ with pkgs;
 
   borgbackup = callPackage ../tools/backup/borg { };
 
-  boomerang = callPackage ../development/tools/boomerang { };
+  boomerang = libsForQt5.callPackage ../development/tools/boomerang { };
 
   boost-build = callPackage ../development/tools/boost-build { };
 
@@ -859,12 +883,16 @@ with pkgs;
 
   btfs = callPackage ../os-specific/linux/btfs { };
 
+  buildah = callPackage ../development/tools/buildah { };
+
   burpsuite = callPackage ../tools/networking/burpsuite {};
 
   c3d = callPackage ../applications/graphics/c3d {
     inherit (darwin.apple_sdk.frameworks) Cocoa;
   };
 
+  cue2pops = callPackage ../tools/cd-dvd/cue2pops { };
+
   cabal2nix = haskell.lib.overrideCabal haskellPackages.cabal2nix (drv: {
     isLibrary = false;
     enableSharedExecutables = false;
@@ -910,6 +938,8 @@ with pkgs;
 
   catdoc = callPackage ../tools/text/catdoc { };
 
+  catdocx = callPackage ../tools/text/catdocx { };
+
   catclock = callPackage ../applications/misc/catclock { };
 
   cde = callPackage ../tools/package-management/cde { };
@@ -1012,6 +1042,8 @@ with pkgs;
 
   dateutils = callPackage ../tools/misc/dateutils { };
 
+  ddar = pythonPackages.callPackage ../tools/backup/ddar { };
+
   ddate = callPackage ../tools/misc/ddate { };
 
   dehydrated = callPackage ../tools/admin/dehydrated { };
@@ -1024,7 +1056,7 @@ with pkgs;
 
   devmem2 = callPackage ../os-specific/linux/devmem2 { };
 
-  dbus-broker = callPackage ../os-specific/linux/dbus-broker {};
+  dbus-broker = callPackage ../os-specific/linux/dbus-broker { };
 
   ioport = callPackage ../os-specific/linux/ioport {};
 
@@ -1099,6 +1131,8 @@ with pkgs;
 
   envconsul = callPackage ../tools/system/envconsul { };
 
+  eschalot = callPackage ../tools/security/eschalot { };
+
   esptool = callPackage ../tools/misc/esptool { };
 
   esptool-ck = callPackage ../tools/misc/esptool-ck { };
@@ -1239,10 +1273,14 @@ with pkgs;
 
   masscan = callPackage ../tools/security/masscan { };
 
+  massren = callPackage ../tools/misc/massren { };
+
   meritous = callPackage ../games/meritous { };
 
   meson = callPackage ../development/tools/build-managers/meson { };
 
+  mp3blaster = callPackage ../applications/audio/mp3blaster { };
+
   mp3fs = callPackage ../tools/filesystems/mp3fs { };
 
   mpdas = callPackage ../tools/audio/mpdas { };
@@ -1341,6 +1379,8 @@ with pkgs;
 
   appdata-tools = callPackage ../tools/misc/appdata-tools { };
 
+  arping = callPackage ../tools/networking/arping { };
+
   asciidoc = callPackage ../tools/typesetting/asciidoc {
     inherit (python2Packages) matplotlib numpy aafigure recursivePthLoader;
     w3m = w3m-batch;
@@ -1390,6 +1430,8 @@ with pkgs;
 
   bfg-repo-cleaner = gitAndTools.bfg-repo-cleaner;
 
+  bfs = callPackage ../tools/system/bfs { };
+
   bgs = callPackage ../tools/X11/bgs { };
 
   biber = callPackage ../tools/typesetting/biber {
@@ -1480,9 +1522,8 @@ with pkgs;
   nrg2iso = callPackage ../tools/cd-dvd/nrg2iso { };
 
   libceph = ceph.lib;
-  ceph = callPackage ../tools/filesystems/ceph { boost = boost159; };
+  ceph = callPackage ../tools/filesystems/ceph { boost = boost165; };
   ceph-dev = ceph;
-  #ceph-dev = lowPrio (callPackage ../tools/filesystems/ceph/dev.nix { });
 
   cfdg = callPackage ../tools/graphics/cfdg {
     ffmpeg = ffmpeg_2;
@@ -1546,6 +1587,8 @@ with pkgs;
 
   connman-gtk = callPackage ../tools/networking/connman-gtk { };
 
+  connman-ncurses = callPackage ../tools/networking/connman-ncurses { };
+
   connman-notify = callPackage ../tools/networking/connman-notify { };
 
   connmanui = callPackage ../tools/networking/connmanui { };
@@ -1646,6 +1689,8 @@ with pkgs;
 
   checkbashisms = callPackage ../development/tools/misc/checkbashisms { };
 
+  ckb = libsForQt5.callPackage ../tools/misc/ckb { };
+
   clamav = callPackage ../tools/security/clamav { };
 
   clex = callPackage ../tools/misc/clex { };
@@ -1653,7 +1698,7 @@ with pkgs;
   client-ip-echo = callPackage ../servers/misc/client-ip-echo { };
 
   cloc = callPackage ../tools/misc/cloc {
-    inherit (perlPackages) perl AlgorithmDiff RegexpCommon;
+    inherit (perlPackages) perl AlgorithmDiff ParallelForkManager RegexpCommon;
   };
 
   cloog = callPackage ../development/libraries/cloog {
@@ -1668,10 +1713,10 @@ with pkgs;
 
   cloud-utils = callPackage ../tools/misc/cloud-utils { };
 
-  ckb = libsForQt5.callPackage ../tools/misc/ckb { };
-
   compass = callPackage ../development/tools/compass { };
 
+  conda = callPackage ../tools/package-management/conda { };
+
   convmv = callPackage ../tools/misc/convmv { };
 
   convoy = callPackage ../tools/filesystems/convoy { };
@@ -1727,7 +1772,7 @@ with pkgs;
 
   curl = callPackage ../tools/networking/curl rec {
     fetchurl = fetchurlBoot;
-    http2Support = !stdenv.isDarwin;
+    http2Support = true;
     zlibSupport = true;
     sslSupport = zlibSupport;
     scpSupport = zlibSupport && !stdenv.isSunOS && !stdenv.isCygwin;
@@ -1811,6 +1856,8 @@ with pkgs;
 
   dev86 = callPackage ../development/compilers/dev86 { };
 
+  diskrsync = callPackage ../tools/backup/diskrsync { };
+
   djbdns = callPackage ../tools/networking/djbdns { };
 
   dnscrypt-proxy = callPackage ../tools/networking/dnscrypt-proxy { };
@@ -1895,10 +1942,16 @@ with pkgs;
   };
   doomseeker = callPackage ../applications/misc/doomseeker { };
 
+  doom-bcc = callPackage ../games/zdoom/bcc-git.nix { };
+
   slade = callPackage ../applications/misc/slade {
     wxGTK = wxGTK30;
   };
 
+  sladeUnstable = callPackage ../applications/misc/slade/git.nix {
+    wxGTK = wxGTK30;
+  };
+
   drive = callPackage ../applications/networking/drive { };
 
   driftnet = callPackage ../tools/networking/driftnet {};
@@ -1939,6 +1992,8 @@ with pkgs;
     # customConfig = builtins.readFile ./dvtm.config.h;
   };
 
+  ecmtools = callPackage ../tools/cd-dvd/ecm-tools { };
+
   e2tools = callPackage ../tools/filesystems/e2tools { };
 
   e2fsprogs = callPackage ../tools/filesystems/e2fsprogs { };
@@ -1953,6 +2008,8 @@ with pkgs;
 
   ecryptfs-helper = callPackage ../tools/security/ecryptfs/helper.nix { };
 
+  edid-decode = callPackage ../tools/misc/edid-decode { };
+
   editres = callPackage ../tools/graphics/editres { };
 
   edit = callPackage ../applications/editors/edit { };
@@ -1967,6 +2024,8 @@ with pkgs;
 
   mcrcon = callPackage ../tools/networking/mcrcon {};
 
+  uudeview = callPackage ../tools/misc/uudeview { };
+
   zabbix-cli = callPackage ../tools/misc/zabbix-cli { };
 
   ### DEVELOPMENT / EMSCRIPTEN
@@ -2472,6 +2531,8 @@ with pkgs;
 
   gource = callPackage ../applications/version-management/gource { };
 
+  govc = callPackage ../tools/virtualization/govc { };
+
   gpart = callPackage ../tools/filesystems/gpart { };
 
   gparted = callPackage ../tools/misc/gparted { };
@@ -2656,6 +2717,8 @@ with pkgs;
 
   hashcat = callPackage ../tools/security/hashcat { };
 
+  hash_extender = callPackage ../tools/security/hash_extender { };
+
   hash-slinger = callPackage ../tools/security/hash-slinger { };
 
   hal-flash = callPackage ../os-specific/linux/hal-flash { };
@@ -2848,6 +2911,8 @@ with pkgs;
 
   inform7 = callPackage ../development/compilers/inform7 { };
 
+  infamousPlugins = callPackage ../applications/audio/infamousPlugins { };
+
   innoextract = callPackage ../tools/archivers/innoextract { };
 
   intecture-agent = callPackage ../tools/admin/intecture/agent.nix { };
@@ -2935,8 +3000,6 @@ with pkgs;
 
   jhead = callPackage ../tools/graphics/jhead { };
 
-  jid = callPackage ../development/tools/jid { };
-
   jing = self.jing-trang;
   jing-trang = callPackage ../tools/text/xml/jing-trang { };
 
@@ -3044,6 +3107,8 @@ with pkgs;
 
   lbreakout2 = callPackage ../games/lbreakout2 { };
 
+  lego = callPackage ../tools/admin/lego { };
+
   leocad = callPackage ../applications/graphics/leocad { };
 
   less = callPackage ../tools/misc/less { };
@@ -3111,6 +3176,8 @@ with pkgs;
 
   minisign = callPackage ../tools/security/minisign { };
 
+  ministat = callPackage ../tools/misc/ministat { };
+
   mmv = callPackage ../tools/misc/mmv { };
 
   morituri = callPackage ../applications/audio/morituri { };
@@ -3214,6 +3281,8 @@ with pkgs;
 
   npm2nix = nodePackages.npm2nix;
 
+  file-rename = callPackage ../tools/filesystems/file-rename { };
+
   kea = callPackage ../tools/networking/kea {
     boost = boost165;
   };
@@ -3771,6 +3840,8 @@ with pkgs;
     graphicalSupport = true;
   };
 
+  nmapsi4 = libsForQt5.callPackage ../tools/security/nmap/qt.nix { };
+
   nnn = callPackage ../applications/misc/nnn { };
 
   notary = callPackage ../tools/security/notary { };
@@ -3946,12 +4017,16 @@ with pkgs;
 
   owncloud-client = libsForQt5.callPackage ../applications/networking/owncloud-client { };
 
+  oxipng = callPackage ../tools/graphics/oxipng { };
+
   p2pvc = callPackage ../applications/video/p2pvc {};
 
   p7zip = callPackage ../tools/archivers/p7zip { };
 
   packagekit = callPackage ../tools/package-management/packagekit { };
 
+  packagekit-qt = libsForQt5.callPackage ../tools/package-management/packagekit/qt.nix { };
+
   packetdrill = callPackage ../tools/networking/packetdrill { };
 
   padthv1 = callPackage ../applications/audio/padthv1 { };
@@ -4147,6 +4222,8 @@ with pkgs;
     libpng = libpng12;
   };
 
+  plotinus = callPackage ../tools/misc/plotinus { };
+
   plotutils = callPackage ../tools/graphics/plotutils { };
 
   plowshare = callPackage ../tools/misc/plowshare { };
@@ -4367,6 +4444,8 @@ with pkgs;
 
   recoll = callPackage ../applications/search/recoll { };
 
+  reflex = callPackage ../development/tools/reflex { };
+
   reiser4progs = callPackage ../tools/filesystems/reiser4progs { };
 
   reiserfsprogs = callPackage ../tools/filesystems/reiserfsprogs { };
@@ -4386,6 +4465,10 @@ with pkgs;
     gsettings_desktop_schemas = gnome3.gsettings_desktop_schemas;
   };
 
+  rename = callPackage ../tools/misc/rename {
+    inherit (perlPackages) buildPerlPackage;
+  };
+
   renameutils = callPackage ../tools/misc/renameutils { };
 
   renderdoc = libsForQt5.callPackage ../applications/graphics/renderdoc { };
@@ -4427,6 +4510,8 @@ with pkgs;
 
   rnv = callPackage ../tools/text/xml/rnv { };
 
+  roundup = callPackage ../tools/misc/roundup { };
+
   routino = callPackage ../tools/misc/routino { };
 
   rq = callPackage ../development/tools/rq {
@@ -4557,6 +4642,8 @@ with pkgs;
 
   sharutils = callPackage ../tools/archivers/sharutils { };
 
+  shocco = callPackage ../tools/text/shocco { };
+
   shotwell = callPackage ../applications/graphics/shotwell { };
 
   shout = nodePackages.shout;
@@ -4601,6 +4688,8 @@ with pkgs;
 
   sisco.lv2 = callPackage ../applications/audio/sisco.lv2 { };
 
+  sit = callPackage ../applications/version-management/sit { };
+
   skippy-xd = callPackage ../tools/X11/skippy-xd {};
 
   sks = callPackage ../servers/sks { inherit (ocamlPackages_4_02) ocaml camlp4; };
@@ -4787,6 +4876,8 @@ with pkgs;
 
   staruml = callPackage ../tools/misc/staruml { inherit (gnome2) GConf; libgcrypt = libgcrypt_1_5; };
 
+  otter-browser = qt5.callPackage ../applications/networking/browsers/otter {};
+
   privoxy = callPackage ../tools/networking/privoxy {
     w3m = w3m-batch;
   };
@@ -4852,6 +4943,8 @@ with pkgs;
 
   thc-hydra = callPackage ../tools/security/thc-hydra { };
 
+  theharvester = callPackage ../tools/security/theharvester { };
+
   thefuck = python3Packages.callPackage ../tools/misc/thefuck { };
 
   thin-provisioning-tools = callPackage ../tools/misc/thin-provisioning-tools {  };
@@ -5122,6 +5215,8 @@ with pkgs;
 
   wal_e = callPackage ../tools/backup/wal-e { };
 
+  watchexec = callPackage ../tools/misc/watchexec { };
+
   watchman = callPackage ../development/tools/watchman { };
 
   wavefunctioncollapse = callPackage ../tools/graphics/wavefunctioncollapse {};
@@ -5378,8 +5473,6 @@ with pkgs;
             platform = {
               name = "ben_nanonote";
               kernelMajor = "2.6";
-              # It's not a bcm47xx processor, but for the headers this should work
-              kernelHeadersBaseConfig = "bcm47xx_defconfig";
               kernelArch = "mips";
             };
             gcc = {
@@ -5499,6 +5592,8 @@ with pkgs;
   zpaq = callPackage ../tools/archivers/zpaq { };
   zpaqd = callPackage ../tools/archivers/zpaq/zpaqd.nix { };
 
+  zsh-autoenv = callPackage ../tools/misc/zsh-autoenv { };
+
   zsh-git-prompt = callPackage ../shells/zsh-git-prompt { };
 
   zsh-navigation-tools = callPackage ../tools/misc/zsh-navigation-tools { };
@@ -5677,6 +5772,7 @@ with pkgs;
 
   compcert = callPackage ../development/compilers/compcert { };
 
+  cpp-gsl = callPackage ../development/libraries/cpp-gsl { };
 
   # Users installing via `nix-env` will likely be using the REPL,
   # which has a hard dependency on Z3, so make sure it is available.
@@ -5688,9 +5784,7 @@ with pkgs;
     '';
   });
 
-  crystal = callPackage ../development/compilers/crystal {
-    llvm = llvm_5;
-  };
+  crystal = callPackage ../development/compilers/crystal { };
 
   devpi-client = callPackage ../development/tools/devpi-client {};
 
@@ -5714,8 +5808,8 @@ with pkgs;
   gambit = callPackage ../development/compilers/gambit { };
   gerbil = callPackage ../development/compilers/gerbil { };
 
-  gccFun = callPackage ../development/compilers/gcc/6;
-  gcc = gcc6;
+  gccFun = callPackage ../development/compilers/gcc/7;
+  gcc = gcc7;
   gcc-unwrapped = gcc.cc;
 
   gccStdenv = if stdenv.cc.isGNU then stdenv else stdenv.override {
@@ -5726,6 +5820,8 @@ with pkgs;
     extraBuildInputs = lib.optional hostPlatform.isDarwin clang.cc;
   };
 
+  gcc7Stdenv = overrideCC gccStdenv gcc7;
+
   wrapCCMulti = cc:
     if system == "x86_64-linux" then let
       # Binutils with glibc multi
@@ -5789,6 +5885,7 @@ with pkgs;
     libcCross1 =
       if targetPlatform.libc == "msvcrt" then targetPackages.windows.mingw_w64_headers
       else if targetPlatform.libc == "libSystem" then darwin.xcode
+      else if targetPlatform.libc == "musl" then musl
       else null;
     binutils1 = wrapBintoolsWith {
       bintools = binutils-unwrapped;
@@ -5801,7 +5898,7 @@ with pkgs;
         inherit noSysDirs;
         # PGO seems to speed up compilation by gcc by ~10%, see #445 discussion
         profiledCompiler = with stdenv; (!isDarwin && (isi686 || isx86_64));
-        isl = if !stdenv.isDarwin then isl_0_14 else null;
+        isl = if !stdenv.isDarwin then isl_0_17 else null;
 
         # just for stage static
         crossStageStatic = true;
@@ -5906,7 +6003,7 @@ with pkgs;
     isl = isl_0_17;
   }));
 
-  gfortran = gfortran6;
+  gfortran = gfortran7;
 
   gfortran48 = wrapCC (gcc48.cc.override {
     name = "gfortran";
@@ -6103,14 +6200,6 @@ with pkgs;
       inherit (darwin.apple_sdk.frameworks) Security;
     };
 
-  go_1_6 = callPackage ../development/compilers/go/1.6.nix {
-    inherit (darwin.apple_sdk.frameworks) Security Foundation;
-  };
-
-  go_1_7 = callPackage ../development/compilers/go/1.7.nix {
-    inherit (darwin.apple_sdk.frameworks) Security Foundation;
-  };
-
   go_1_8 = callPackage ../development/compilers/go/1.8.nix {
     inherit (darwin.apple_sdk.frameworks) Security Foundation;
   };
@@ -6298,6 +6387,8 @@ with pkgs;
 
   julia = julia_06;
 
+  jwasm =  callPackage ../development/compilers/jwasm { };
+
   kotlin = callPackage ../development/compilers/kotlin { };
 
   lazarus = callPackage ../development/compilers/fpc/lazarus.nix {
@@ -6328,34 +6419,50 @@ with pkgs;
   llvm_35 = llvmPackages_35.llvm;
   llvm_34 = llvmPackages_34.llvm;
 
-  llvmPackages = recurseIntoAttrs llvmPackages_4;
+  llvmPackages = recurseIntoAttrs llvmPackages_5;
 
   llvmPackagesSelf = llvmPackages_34.override {
     stdenv = libcxxStdenv;
   };
 
-  llvmPackages_34 = callPackage ../development/compilers/llvm/3.4 {
+  llvmPackages_34 = callPackage ../development/compilers/llvm/3.4 ({
     isl = isl_0_12;
-  };
+  } // stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) {
+    stdenv = overrideCC stdenv gcc6;
+  });
 
-  llvmPackages_35 = callPackage ../development/compilers/llvm/3.5 {
+  llvmPackages_35 = callPackage ../development/compilers/llvm/3.5 ({
     isl = isl_0_14;
-  };
+  } // stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) {
+    stdenv = overrideCC stdenv gcc6;
+  });
 
-  llvmPackages_37 = callPackage ../development/compilers/llvm/3.7 {
+  llvmPackages_37 = callPackage ../development/compilers/llvm/3.7 ({
     inherit (stdenvAdapters) overrideCC;
-  };
+  } // stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) {
+    stdenv = overrideCC stdenv gcc6;
+  });
 
-  llvmPackages_38 = callPackage ../development/compilers/llvm/3.8 {
+  llvmPackages_38 = callPackage ../development/compilers/llvm/3.8 ({
     inherit (stdenvAdapters) overrideCC;
-  };
+  } // stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) {
+    stdenv = overrideCC stdenv gcc6;
+  });
 
-  llvmPackages_39 = callPackage ../development/compilers/llvm/3.9 {
+  llvmPackages_39 = callPackage ../development/compilers/llvm/3.9 ({
     inherit (stdenvAdapters) overrideCC;
-  };
+  } // stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) {
+    stdenv = overrideCC stdenv gcc6;
+  });
 
   llvmPackages_4 = callPackage ../development/compilers/llvm/4 ({
     inherit (stdenvAdapters) overrideCC;
+  } // stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) {
+    stdenv = overrideCC stdenv gcc6;
+  });
+
+  llvmPackages_5 = callPackage ../development/compilers/llvm/5 ({
+    inherit (stdenvAdapters) overrideCC;
   } // stdenv.lib.optionalAttrs stdenv.isDarwin {
     cmake = cmake.override {
       isBootstrap = true;
@@ -6363,12 +6470,10 @@ with pkgs;
     };
     libxml2 = libxml2.override { pythonSupport = false; };
     python2 = callPackage ../development/interpreters/python/cpython/2.7/boot.nix { inherit (darwin) CF configd; };
+  } // stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) {
+    stdenv = overrideCC stdenv gcc6; # with gcc-7: undefined reference to `__divmoddi4'
   });
 
-  llvmPackages_5 = callPackage ../development/compilers/llvm/5 {
-    inherit (stdenvAdapters) overrideCC;
-  };
-
   manticore = callPackage ../development/compilers/manticore { };
 
   mentorToolchains = recurseIntoAttrs (
@@ -6427,6 +6532,11 @@ with pkgs;
     inherit (darwin.apple_sdk.frameworks) Foundation;
   });
 
+  mono58 = lowPrio (callPackage ../development/compilers/mono/5.8.nix {
+    inherit (darwin) libobjc;
+    inherit (darwin.apple_sdk.frameworks) Foundation;
+  });
+
   monoDLLFixer = callPackage ../build-support/mono-dll-fixer { };
 
   mozart-binary = callPackage ../development/compilers/mozart/binary.nix { };
@@ -6483,7 +6593,10 @@ with pkgs;
   };
 
   # For beta and nightly releases use the nixpkgs-mozilla overlay
-  rust = callPackage ../development/compilers/rust { };
+  rust = callPackage ../development/compilers/rust
+    (stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) {
+      stdenv = overrideCC stdenv gcc6; # with gcc-7: undefined reference to `__divmoddi4'
+    });
   inherit (rust) cargo rustc;
 
   buildRustCrate = callPackage ../build-support/rust/build-rust-crate.nix { };
@@ -6658,6 +6771,8 @@ with pkgs;
 
   yosys = callPackage ../development/compilers/yosys { };
 
+  z88dk = callPackage ../development/compilers/z88dk { };
+
   zulu8 = callPackage ../development/compilers/zulu/8.nix { };
   zulu9 = callPackage ../development/compilers/zulu { };
   zulu = zulu9;
@@ -6693,6 +6808,8 @@ with pkgs;
 
   dhall-text = haskell.lib.justStaticExecutables haskellPackages.dhall-text;
 
+  duktape = callPackage ../development/interpreters/duktape { };
+
   beam = callPackage ./beam-packages.nix { };
 
   inherit (beam.interpreters)
@@ -6847,12 +6964,14 @@ with pkgs;
 
   ocropus = callPackage ../applications/misc/ocropus { };
 
+  octopus = callPackage ../applications/science/chemistry/octopus { openblas=openblasCompat; };
+
   inherit (callPackages ../development/interpreters/perl {}) perl perl522 perl524 perl526;
 
   pachyderm = callPackage ../applications/networking/cluster/pachyderm { };
 
-  php = php71;
-  phpPackages = php71Packages;
+  php = php72;
+  phpPackages = php72Packages;
 
   php56Packages = recurseIntoAttrs (callPackage ./php-packages.nix {
     php = php56;
@@ -6877,13 +6996,17 @@ with pkgs;
     php71
     php72;
 
-  php-embed = php71-embed;
+  php-embed = php72-embed;
 
   php71-embed = php71.override {
     config.php.embed = true;
     config.php.apxs2 = false;
   };
 
+  php72-embed = php72.override {
+    config.php.embed = true;
+    config.php.apxs2 = false;
+  };
 
   picoc = callPackage ../development/interpreters/picoc {};
 
@@ -6973,6 +7096,8 @@ with pkgs;
   pew = callPackage ../development/tools/pew {};
   pipenv = callPackage ../development/tools/pipenv {};
 
+  pipewire = callPackage ../development/libraries/pipewire {};
+
   pyrex = pyrex095;
 
   pyrex095 = callPackage ../development/interpreters/pyrex/0.9.5.nix { };
@@ -6983,8 +7108,10 @@ with pkgs;
     # racket 6.11 doesn't build with gcc6 + recent glibc:
     # https://github.com/racket/racket/pull/1886
     # https://github.com/NixOS/nixpkgs/pull/31017#issuecomment-343574769
-    stdenv = overrideCC stdenv gcc7;
+    stdenv = if stdenv.isDarwin then stdenv else gcc7Stdenv;
+    inherit (darwin.apple_sdk.frameworks) CoreFoundation;
   };
+  racket-minimal = callPackage ../development/interpreters/racket/minimal.nix { };
 
   rakudo = callPackage ../development/interpreters/rakudo {
     inherit (darwin.apple_sdk.frameworks) CoreServices ApplicationServices;
@@ -7013,21 +7140,11 @@ with pkgs;
   bundlerApp = callPackage ../development/ruby-modules/bundler-app { };
 
   inherit (callPackage ../development/interpreters/ruby { inherit (darwin.apple_sdk.frameworks) Foundation; })
-    ruby_2_0_0
-    ruby_2_1_10
-    ruby_2_2_9
-    ruby_2_3_6
-    ruby_2_4_3
-    ruby_2_5_0;
-
-  # Ruby aliases
-  ruby = ruby_2_3;
-  ruby_2_0 = ruby_2_0_0;
-  ruby_2_1 = ruby_2_1_10;
-  ruby_2_2 = ruby_2_2_9;
-  ruby_2_3 = ruby_2_3_6;
-  ruby_2_4 = ruby_2_4_3;
-  ruby_2_5 = ruby_2_5_0;
+    ruby_2_3
+    ruby_2_4
+    ruby_2_5;
+
+  ruby = ruby_2_4;
 
   scsh = callPackage ../development/interpreters/scsh { };
 
@@ -7189,7 +7306,9 @@ with pkgs;
 
   kt = callPackage ../tools/misc/kt {};
 
-  asn2quickder = callPackage ../development/tools/asn2quickder {};
+  arpa2cm = callPackage ../development/tools/build-managers/arpa2cm { };
+
+  asn2quickder = python2Packages.callPackage ../development/tools/asn2quickder {};
 
   astyle = callPackage ../development/tools/misc/astyle { };
 
@@ -7227,8 +7346,9 @@ with pkgs;
   bam = callPackage ../development/tools/build-managers/bam {};
 
   bazel_0_4 = callPackage ../development/tools/build-managers/bazel/0.4.nix { };
-  bazel_0_9 = callPackage ../development/tools/build-managers/bazel { };
-  bazel = bazel_0_9;
+  bazel = callPackage ../development/tools/build-managers/bazel { };
+
+  buildBazelPackage = callPackage ../build-support/build-bazel-package { };
 
   bear = callPackage ../development/tools/build-managers/bear { };
 
@@ -7237,6 +7357,8 @@ with pkgs;
   binutils =
     if targetPlatform.isDarwin
     then darwin.binutils
+    else if targetPlatform.isRiscV
+    then binutils_2_30
     else binutils-raw;
 
   binutils-unwrapped = callPackage ../development/tools/misc/binutils {
@@ -7247,6 +7369,15 @@ with pkgs;
     libc = if targetPlatform != hostPlatform then libcCross else stdenv.cc.libc;
     bintools = binutils-unwrapped;
   };
+  binutils-unwrapped_2_30 = callPackage ../development/tools/misc/binutils/2.30.nix {
+    # FHS sys dirs presumably only have stuff for the build platform
+    noSysDirs = (targetPlatform != buildPlatform) || noSysDirs;
+  };
+  binutils-raw_2_30 = wrapBintoolsWith {
+    libc = if targetPlatform != hostPlatform then libcCross else stdenv.cc.libc;
+    bintools = binutils-unwrapped_2_30;
+  };
+  binutils_2_30 = binutils-raw_2_30;
 
   binutils_nogold = lowPrio (binutils-raw.override {
     bintools = binutils-raw.bintools.override {
@@ -7415,6 +7546,8 @@ with pkgs;
   libcxx = llvmPackages.libcxx;
   libcxxabi = llvmPackages.libcxxabi;
 
+  librarian-puppet-go = callPackage ../development/tools/librarian-puppet-go { };
+
   libstdcxx5 = callPackage ../development/libraries/libstdc++5 { };
 
   libsigrok = callPackage ../development/tools/libsigrok { };
@@ -7556,12 +7689,17 @@ with pkgs;
 
   gnome_doc_utils = callPackage ../development/tools/documentation/gnome-doc-utils {};
 
+  gnome-desktop-testing = callPackage ../development/tools/gnome-desktop-testing {};
+
   gnum4 = callPackage ../development/tools/misc/gnum4 { };
 
   gnumake382 = callPackage ../development/tools/build-managers/gnumake/3.82 { };
   gnumake3 = gnumake382;
   gnumake42 = callPackage ../development/tools/build-managers/gnumake/4.2 { };
-  gnumake = gnumake42;
+  gnumake = if hostPlatform.isRiscV # Technically this check should be for glibc version.
+    then gnumake42HEAD
+  else gnumake42;
+  gnumake42HEAD = callPackage ../development/tools/build-managers/gnumake/4.2/head.nix { };
 
   gnustep = recurseIntoAttrs (callPackage ../desktops/gnustep {});
 
@@ -7597,6 +7735,8 @@ with pkgs;
     guile = guile_2_0;
   };
 
+  hcloud = callPackage ../development/tools/hcloud { };
+
   help2man = callPackage ../development/tools/misc/help2man {
     inherit (perlPackages) LocaleGettext;
   };
@@ -7793,6 +7933,8 @@ with pkgs;
 
   postiats-utilities = callPackage ../development/tools/postiats-utilities {};
 
+  postman = callPackage ../development/web/postman {};
+
   pprof = callPackage ../development/tools/profiling/pprof { };
 
   pyprof2calltree = pythonPackages.callPackage ../development/tools/profiling/pyprof2calltree { };
@@ -7835,6 +7977,7 @@ with pkgs;
     rubyBindings = config.radare.rubyBindings or false;
     luaBindings = config.radare.luaBindings or false;
   };
+  radare2-cutter = libsForQt5.callPackage ../development/tools/analysis/radare2-cutter { };
 
   ragel = ragelStable;
 
@@ -7846,9 +7989,7 @@ with pkgs;
 
   hammer = callPackage ../development/tools/parsing/hammer { };
 
-  redis-dump = callPackage ../development/tools/redis-dump {
-    ruby = ruby_2_0;
-  };
+  redis-dump = callPackage ../development/tools/redis-dump { };
 
   redo = callPackage ../development/tools/build-managers/redo { };
 
@@ -7975,9 +8116,7 @@ with pkgs;
 
   tweak = callPackage ../applications/editors/tweak { };
 
-  uhd = callPackage ../development/tools/misc/uhd {
-    boost = boost165;
-  };
+  uhd = callPackage ../development/tools/misc/uhd { };
 
   uisp = callPackage ../development/tools/misc/uisp { };
 
@@ -8038,9 +8177,10 @@ with pkgs;
 
   yacc = bison;
 
+  yaml2json = callPackage ../development/tools/yaml2json { };
+
   ycmd = callPackage ../development/tools/misc/ycmd {
     inherit (darwin.apple_sdk.frameworks) Cocoa;
-    llvmPackages = llvmPackages_5;
     python = python2;
   };
 
@@ -8094,6 +8234,8 @@ with pkgs;
 
   appstream-glib = callPackage ../development/libraries/appstream-glib { };
 
+  appstream-qt = libsForQt5.callPackage ../development/libraries/appstream/qt.nix { };
+
   apr = callPackage ../development/libraries/apr { };
 
   aprutil = callPackage ../development/libraries/apr-util {
@@ -8148,6 +8290,10 @@ with pkgs;
 
   beecrypt = callPackage ../development/libraries/beecrypt { };
 
+  belcard = callPackage ../development/libraries/belcard { };
+
+  belr = callPackage ../development/libraries/belr { };
+
   beignet = callPackage ../development/libraries/beignet {
     inherit (llvmPackages_39) llvm clang-unwrapped;
   };
@@ -8187,6 +8333,8 @@ with pkgs;
 
   bwidget = callPackage ../development/libraries/bwidget { };
 
+  bzrtp = callPackage ../development/libraries/bzrtp { };
+
   c-ares = callPackage ../development/libraries/c-ares {
     fetchurl = fetchurlBoot;
   };
@@ -8608,6 +8756,8 @@ with pkgs;
 
   getdata = callPackage ../development/libraries/getdata { };
 
+  getdns = callPackage ../development/libraries/getdns { };
+
   gettext = callPackage ../development/libraries/gettext { };
 
   gflags = callPackage ../development/libraries/gflags { };
@@ -8661,6 +8811,9 @@ with pkgs;
   glibc = callPackage ../development/libraries/glibc {
     installLocales = config.glibc.locales or false;
   };
+  glibc_2_27 = callPackage ../development/libraries/glibc/2.27.nix {
+    installLocales = config.glibc.locales or false;
+  };
 
   glibc_memusage = callPackage ../development/libraries/glibc {
     installLocales = false;
@@ -8668,25 +8821,34 @@ with pkgs;
   };
 
   # Being redundant to avoid cycles on boot. TODO: find a better way
-  glibcCross = callPackage ../development/libraries/glibc {
+  glibcCross = let
+    expr = if hostPlatform.isRiscV
+             then ../development/libraries/glibc/2.27.nix
+           else ../development/libraries/glibc;
+  in callPackage expr {
     installLocales = config.glibc.locales or false;
     stdenv = crossLibcStdenv;
   };
 
+  muslCross = callPackage ../os-specific/linux/musl {
+    stdenv = crossLibcStdenv;
+  };
+
   # We can choose:
   libcCrossChooser = name:
     # libc is hackily often used from the previous stage. This `or`
     # hack fixes the hack, *sigh*.
     /**/ if name == "glibc" then targetPackages.glibcCross or glibcCross
     else if name == "uclibc" then uclibcCross
+    else if name == "musl" then targetPackages.muslCross or muslCross
     else if name == "msvcrt" then targetPackages.windows.mingw_w64 or windows.mingw_w64
     else if name == "libSystem" then darwin.xcode
     else throw "Unknown libc";
 
   libcCross = assert targetPlatform != buildPlatform; libcCrossChooser targetPlatform.libc;
 
-  # Only supported on Linux
-  glibcLocales = if stdenv.isLinux then callPackage ../development/libraries/glibc/locales.nix { } else null;
+  # Only supported on Linux, using glibc
+  glibcLocales = if hostPlatform.libc == "glibc" then callPackage ../development/libraries/glibc/locales.nix { } else null;
 
   glibcInfo = callPackage ../development/libraries/glibc/info.nix { };
 
@@ -8694,7 +8856,9 @@ with pkgs;
     glibc32 = pkgsi686Linux.glibc;
   };
 
-  glm = callPackage ../development/libraries/glm { };
+  glm = callPackage ../development/libraries/glm
+    (lib.optionalAttrs stdenv.cc.isGNU { stdenv = overrideCC stdenv gcc6;/*maybe a hack*/ });
+
   glm_0954 = callPackage ../development/libraries/glm/0954.nix { };
 
   globalplatform = callPackage ../development/libraries/globalplatform { };
@@ -9035,8 +9199,18 @@ with pkgs;
 
   hyena = callPackage ../development/libraries/hyena { };
 
-  icu58 = callPackage ../development/libraries/icu/58.nix { };
-  icu59 = callPackage ../development/libraries/icu/59.nix { };
+  icu58 = callPackage ../development/libraries/icu/58.nix
+    (stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) {
+      stdenv = overrideCC stdenv gcc6; # with gcc-7: undefined reference to `__divmoddi4'
+    });
+  icu59 = callPackage ../development/libraries/icu/59.nix
+    (stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) {
+      stdenv = overrideCC stdenv gcc6; # with gcc-7: undefined reference to `__divmoddi4'
+    });
+  icu60 = callPackage ../development/libraries/icu/60.nix
+    (stdenv.lib.optionalAttrs (stdenv.cc.isGNU && stdenv.hostPlatform.isi686) {
+      stdenv = overrideCC stdenv gcc6; # with gcc-7: undefined reference to `__divmoddi4'
+    });
 
   icu = icu59;
 
@@ -9410,6 +9584,8 @@ with pkgs;
 
   libetpan = callPackage ../development/libraries/libetpan { };
 
+  libexecinfo = callPackage ../development/libraries/libexecinfo { };
+
   libfaketime = callPackage ../development/libraries/libfaketime { };
 
   libfakekey = callPackage ../development/libraries/libfakekey { };
@@ -9686,7 +9862,7 @@ with pkgs;
   };
 
   # On non-GNU systems we need GNU Gettext for libintl.
-  libintlOrEmpty = stdenv.lib.optional (!stdenv.isLinux) gettext;
+  libintlOrEmpty = stdenv.lib.optional (!stdenv.isLinux || hostPlatform.libc != "glibc") gettext;
 
   libid3tag = callPackage ../development/libraries/libid3tag {
     gperf = gperf_3_0;
@@ -9866,9 +10042,7 @@ with pkgs;
   };
 
   libproxy = callPackage ../development/libraries/libproxy {
-    stdenv = if stdenv.isDarwin
-      then overrideCC stdenv gcc
-      else stdenv;
+    inherit (darwin.apple_sdk.frameworks) SystemConfiguration CoreFoundation JavaScriptCore;
   };
 
   libpseudo = callPackage ../development/libraries/libpseudo { };
@@ -10109,23 +10283,6 @@ with pkgs;
       };
   });
 
-  # interception-tools needs this. This should be removed when there is a new
-  # release of libyamlcpp, i.e. when the version of libyamlcpp is newer than
-  # 0.5.3.
-  libyamlcppWithoutBoost = libyamlcpp.overrideAttrs (oldAttrs: rec {
-    name = "libyaml-cpp-${version}";
-    version = "2017-08-25";
-
-    src = fetchFromGitHub {
-      owner = "jbeder";
-      repo = "yaml-cpp";
-      rev = "beb44b872c07c74556314e730c6f20a00b32e8e5";
-      sha256 = "1qkr3i5lin6m36w5rbimc7pjx3nx686xnjb6lw00xf67iqrl4h4m";
-    };
-
-    buildInputs = [ cmake ];
-  });
-
   libykneomgr = callPackage ../development/libraries/libykneomgr { };
 
   libytnef = callPackage ../development/libraries/libytnef { };
@@ -10213,8 +10370,6 @@ with pkgs;
     # makes it slower, but during runtime we link against just mesa_drivers
     # through /run/opengl-driver*, which is overriden according to config.grsecurity
     # grsecEnabled = true; # no more support in nixpkgs ATM
-
-    llvmPackages = llvmPackages_5;
   });
 
   mesa_glu =  mesaDarwinOr (callPackage ../development/libraries/mesa-glu { });
@@ -10321,8 +10476,12 @@ with pkgs;
 
   notify-sharp = callPackage ../development/libraries/notify-sharp { };
 
-  ncurses5 = callPackage ../development/libraries/ncurses { abiVersion = "5"; };
-  ncurses6 = callPackage ../development/libraries/ncurses { abiVersion = "6"; };
+  ncurses5 = callPackage ../development/libraries/ncurses {
+    abiVersion = "5";
+  };
+  ncurses6 = callPackage ../development/libraries/ncurses {
+    abiVersion = "6";
+  };
   ncurses = ncurses6;
 
   neardal = callPackage ../development/libraries/neardal { };
@@ -10375,7 +10534,10 @@ with pkgs;
 
   nvidia-video-sdk = callPackage ../development/libraries/nvidia-video-sdk { };
 
-  ocl-icd = callPackage ../development/libraries/ocl-icd { };
+  ocl-icd-oclhGen = oclh: callPackage ../development/libraries/ocl-icd { opencl-headers = oclh; };
+  ocl-icd-oclh_1_2 = ocl-icd-oclhGen opencl-headers_1_2;
+  ocl-icd-oclh_2_2 = ocl-icd-oclhGen opencl-headers_2_2;
+  ocl-icd = ocl-icd-oclh_2_2;
 
   ode = callPackage ../development/libraries/ode { };
 
@@ -10402,7 +10564,10 @@ with pkgs;
 
   opencascade_oce = opencascade;
 
-  opencl-headers = callPackage ../development/libraries/opencl-headers { };
+  opencl-headersGen = v: callPackage ../development/libraries/opencl-headers { version = v; };
+  opencl-headers_1_2 = opencl-headersGen "12";
+  opencl-headers_2_2 = opencl-headersGen "22";
+  opencl-headers = opencl-headers_2_2;
 
   opencl-clhpp = callPackage ../development/libraries/opencl-clhpp { };
 
@@ -11103,6 +11268,8 @@ with pkgs;
 
   spice_protocol = callPackage ../development/libraries/spice-protocol { };
 
+  spice-up = callPackage ../applications/office/spice-up { };
+
   sratom = callPackage ../development/libraries/audio/sratom { };
 
   srm = callPackage ../tools/security/srm { };
@@ -11138,6 +11305,8 @@ with pkgs;
 
   strigi = callPackage ../development/libraries/strigi { clucene_core = clucene_core_2; };
 
+  subdl = callPackage ../applications/video/subdl { };
+
   subtitleeditor = callPackage ../applications/video/subtitleeditor { };
 
   suil-qt4 = callPackage ../development/libraries/audio/suil {
@@ -11302,7 +11471,7 @@ with pkgs;
   v8_3_16_14 = callPackage ../development/libraries/v8/3.16.14.nix {
     inherit (python2Packages) python gyp;
     cctools = darwin.cctools;
-    stdenv = overrideCC stdenv gcc5;
+    stdenv = if stdenv.isDarwin then stdenv else overrideCC stdenv gcc5;
   };
 
   v8_6_x = callPackage ../development/libraries/v8/6_x.nix {
@@ -11394,6 +11563,7 @@ with pkgs;
   webkitgtk218x = callPackage ../development/libraries/webkitgtk/2.18.nix {
     harfbuzz = harfbuzz-icu;
     inherit (gst_all_1) gst-plugins-base gst-plugins-bad;
+    stdenv = overrideCC stdenv gcc6;
   };
 
   webkitgtk24x-gtk2 = webkitgtk24x-gtk3.override {
@@ -11673,14 +11843,6 @@ with pkgs;
 
   ### DEVELOPMENT / GO MODULES
 
-  buildGo16Package = callPackage ../development/go-modules/generic {
-    go = go_1_6;
-  };
-
-  buildGo17Package = callPackage ../development/go-modules/generic {
-    go = go_1_7;
-  };
-
   buildGo18Package = callPackage ../development/go-modules/generic {
     go = go_1_8;
   };
@@ -11867,8 +12029,8 @@ with pkgs;
   bind = callPackage ../servers/dns/bind { };
   dnsutils = bind.dnsutils;
 
-  bird = callPackage ../servers/bird { };
-  bird6 = bird.override { enableIPv6 = true; };
+  inherit (callPackages ../servers/bird { })
+    bird bird6 bird2;
 
   bosun = callPackage ../servers/monitoring/bosun { };
   scollector = bosun;
@@ -11982,6 +12144,8 @@ with pkgs;
 
   grafana = callPackage ../servers/monitoring/grafana { };
 
+  h2o = callPackage ../servers/http/h2o { };
+
   haka = callPackage ../tools/security/haka { };
 
   heapster = callPackage ../servers/monitoring/heapster { };
@@ -12012,6 +12176,8 @@ with pkgs;
 
   lighttpd = callPackage ../servers/http/lighttpd { };
 
+  lwan = callPackage ../servers/http/lwan { };
+
   mailman = callPackage ../servers/mail/mailman { };
 
   mattermost = callPackage ../servers/mattermost { };
@@ -12093,6 +12259,7 @@ with pkgs;
 
   oauth2_proxy = callPackage ../servers/oauth2_proxy { };
 
+  openafs = callPackage ../servers/openafs { tsmbac = null; ncurses = null; };
   openpts = callPackage ../servers/openpts { };
 
   openresty = callPackage ../servers/http/openresty { };
@@ -12237,7 +12404,8 @@ with pkgs;
 
   softether_4_18 = callPackage ../servers/softether/4.18.nix { };
   softether_4_20 = callPackage ../servers/softether/4.20.nix { };
-  softether = softether_4_20;
+  softether_4_25 = callPackage ../servers/softether/4.25.nix { };
+  softether = softether_4_25;
 
   qboot = callPackage ../applications/virtualization/qboot { stdenv = stdenv_32bit; };
 
@@ -12435,6 +12603,8 @@ with pkgs;
   slurm-full = appendToName "full" (callPackage ../servers/computing/slurm { });
   slurm-llnl-full = slurm-full; # renamed July 2017
 
+  slurm-spank-x11 = callPackage ../servers/computing/slurm-spank-x11 { };
+
   systemd-journal2gelf = callPackage ../tools/system/systemd-journal2gelf { };
 
   inherit (callPackages ../servers/http/tomcat { })
@@ -12491,11 +12661,12 @@ with pkgs;
   };
 
   xorg = recurseIntoAttrs (lib.callPackagesWith pkgs ../servers/x11/xorg/default.nix {
-    inherit clangStdenv fetchurl fetchgit fetchpatch stdenv pkgconfig intltool freetype fontconfig
+    inherit clangStdenv fetchurl fetchgit fetchpatch stdenv intltool freetype fontconfig
       libxslt expat libpng zlib perl mesa_drivers spice_protocol libunwind
       dbus libuuid openssl gperf m4 libevdev tradcpp libinput mcpp makeWrapper autoreconfHook
-      autoconf automake libtool xmlto asciidoc flex bison mtdev pixman
+      autoconf automake libtool mtdev pixman
       cairo epoxy;
+    inherit (buildPackages) pkgconfig xmlto asciidoc flex bison;
     inherit (darwin) apple_sdk cf-private libobjc;
     bootstrap_cmds = if stdenv.isDarwin then darwin.bootstrap_cmds else null;
     mesa = mesa_noglu;
@@ -12589,6 +12760,7 @@ with pkgs;
   bridge-utils = callPackage ../os-specific/linux/bridge-utils { };
 
   busybox = callPackage ../os-specific/linux/busybox { };
+  busybox-sandbox-shell = callPackage ../os-specific/linux/busybox/sandbox-shell.nix { };
 
   cachefilesd = callPackage ../os-specific/linux/cachefilesd { };
 
@@ -12657,7 +12829,7 @@ with pkgs;
   fscrypt-experimental = callPackage ../os-specific/linux/fscrypt { };
   fscryptctl-experimental = callPackage ../os-specific/linux/fscryptctl { };
 
-  fwupd = callPackage ../os-specific/linux/firmware/fwupd { inherit (gnome2) gtk_doc; inherit (python3Packages) pygobject3 pillow; };
+  fwupd = callPackage ../os-specific/linux/firmware/fwupd { };
 
   fwupdate = callPackage ../os-specific/linux/firmware/fwupdate { };
 
@@ -12838,8 +13010,8 @@ with pkgs;
 
   lkl = callPackage ../applications/virtualization/lkl { };
 
-  linuxHeaders_4_4 = callPackage ../os-specific/linux/kernel-headers/4.4.nix { };
-  linuxHeaders = linuxHeaders_4_4;
+  inherit (callPackages ../os-specific/linux/kernel-headers { })
+    linuxHeaders;
 
   kernelPatches = callPackage ../os-specific/linux/kernel/patches.nix { };
 
@@ -12855,16 +13027,12 @@ with pkgs;
       ];
   };
 
-  linux_hardened_copperhead = callPackage ../os-specific/linux/kernel/linux-hardened-copperhead.nix {
+  linux_copperhead = callPackage ../os-specific/linux/kernel/linux-copperhead-hardened.nix {
     kernelPatches = with kernelPatches; [
       kernelPatches.bridge_stp_helper
       kernelPatches.modinst_arg_list_too_long
       kernelPatches.tag_hardened
     ];
-    extraConfig = import ../os-specific/linux/kernel/hardened-config.nix {
-      inherit stdenv;
-      inherit (linux_hardened_copperhead) version;
-    };
   };
 
   # linux mptcp is based on the 4.4 kernel
@@ -12974,10 +13142,6 @@ with pkgs;
   linux_testing_bcachefs = callPackage ../os-specific/linux/kernel/linux-testing-bcachefs.nix {
     kernelPatches =
       [ kernelPatches.bridge_stp_helper
-        kernelPatches.p9_fixes
-        # See pkgs/os-specific/linux/kernel/cpu-cgroup-v2-patches/README.md
-        # when adding a new linux version
-        kernelPatches.cpu-cgroup-v2."4.11"
         kernelPatches.modinst_arg_list_too_long
       ]
       ++ lib.optionals ((platform.kernelArch or null) == "mips")
@@ -12987,6 +13151,19 @@ with pkgs;
       ];
   };
 
+  linux_riscv = callPackage ../os-specific/linux/kernel/linux-riscv.nix {
+    kernelPatches = [
+      kernelPatches.bridge_stp_helper
+      kernelPatches.modinst_arg_list_too_long
+    ] ++ lib.optionals hostPlatform.isRiscV [
+      kernelPatches.riscv_modules
+      kernelPatches.riscv_irq_busy
+      kernelPatches.riscv_install
+      kernelPatches.riscv_initrd
+      kernelPatches.riscv_initrd_free
+   ];
+  };
+
   linux_samus_4_12 = callPackage ../os-specific/linux/kernel/linux-samus-4.12.nix {
     kernelPatches =
       [ kernelPatches.bridge_stp_helper
@@ -12998,8 +13175,6 @@ with pkgs;
     ];
   };
 
-  linux_samus_latest = linux_samus_4_12;
-
   /* Linux kernel modules are inherently tied to a specific kernel.  So
      rather than provide specific instances of those packages for a
      specific kernel, we have a function that builds those packages
@@ -13010,6 +13185,7 @@ with pkgs;
     callPackage = newScope self;
 
     inherit kernel;
+    inherit (kernel) stdenv; # in particular, use the same compiler by default
 
     acpi_call = callPackage ../os-specific/linux/acpi-call {};
 
@@ -13077,7 +13253,7 @@ with pkgs;
 
     rtlwifi_new = callPackage ../os-specific/linux/rtlwifi_new { };
 
-    openafsClient = callPackage ../servers/openafs-client { };
+    openafs = callPackage ../servers/openafs/module.nix { };
 
     facetimehd = callPackage ../os-specific/linux/facetimehd { };
 
@@ -13105,7 +13281,7 @@ with pkgs;
     sch_cake = callPackage ../os-specific/linux/sch_cake { };
 
     inherit (callPackage ../os-specific/linux/spl {})
-      splStable splUnstable;
+      splStable splUnstable splLegacyCrypto;
 
     spl = splStable;
 
@@ -13136,13 +13312,13 @@ with pkgs;
     inherit (callPackage ../os-specific/linux/zfs {
       configFile = "kernel";
       inherit kernel spl;
-     }) zfsStable zfsUnstable;
+     }) zfsStable zfsUnstable zfsLegacyCrypto;
 
      zfs = zfsStable;
   });
 
   # The current default kernel / kernel modules.
-  linuxPackages = linuxPackages_4_9;
+  linuxPackages = linuxPackages_4_14;
   linux = linuxPackages.kernel;
 
   # Update this when adding the newest kernel major version!
@@ -13151,7 +13327,6 @@ with pkgs;
 
   # Build the kernel modules for the some of the kernels.
   linuxPackages_beagleboard = linuxPackagesFor pkgs.linux_beagleboard;
-  linuxPackages_hardened_copperhead = linuxPackagesFor pkgs.linux_hardened_copperhead;
   linuxPackages_mptcp = linuxPackagesFor pkgs.linux_mptcp;
   linuxPackages_rpi = linuxPackagesFor pkgs.linux_rpi;
   linuxPackages_4_4 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_4);
@@ -13174,26 +13349,40 @@ with pkgs;
   linuxPackages_testing_bcachefs = recurseIntoAttrs (linuxPackagesFor pkgs.linux_testing_bcachefs);
 
   # Build a kernel for Xen dom0
+  linuxPackages_xen_dom0 = recurseIntoAttrs (linuxPackagesFor (pkgs.linux.override { features.xen_dom0=true; }));
+
   linuxPackages_latest_xen_dom0 = recurseIntoAttrs (linuxPackagesFor (pkgs.linux_latest.override { features.xen_dom0=true; }));
 
   # Hardened linux
-  linux_hardened = let linux = pkgs.linuxPackages_latest.kernel; in linux.override {
+  hardenedLinuxPackagesFor = kernel: linuxPackagesFor (kernel.override {
     extraConfig = import ../os-specific/linux/kernel/hardened-config.nix {
       inherit stdenv;
-      inherit (linux) version;
+      inherit (kernel) version;
     };
-  };
+  });
+
+  linuxPackages_hardened = recurseIntoAttrs (hardenedLinuxPackagesFor pkgs.linux);
+  linux_hardened = linuxPackages_hardened.kernel;
+
+  linuxPackages_latest_hardened = recurseIntoAttrs (hardenedLinuxPackagesFor pkgs.linux_latest);
+  linux_latest_hardened = linuxPackages_latest_hardened.kernel;
 
-  linuxPackages_hardened =
-    recurseIntoAttrs (linuxPackagesFor linux_hardened);
+  linuxPackages_xen_dom0_hardened = recurseIntoAttrs (hardenedLinuxPackagesFor (pkgs.linux.override { features.xen_dom0=true; }));
+
+  linuxPackages_latest_xen_dom0_hardened = recurseIntoAttrs (hardenedLinuxPackagesFor (pkgs.linux_latest.override { features.xen_dom0=true; }));
+
+  linuxPackages_copperhead_hardened = recurseIntoAttrs (hardenedLinuxPackagesFor pkgs.linux_copperhead);
+  linux_copperhead_hardened = linuxPackages_copperhead_hardened.kernel;
+  linux_hardened_copperhead = linux_copperhead_hardened; # alias for backward compatibility
 
   # Samus kernels
   linuxPackages_samus_4_12 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_samus_4_12);
-  linuxPackages_samus_latest = recurseIntoAttrs (linuxPackagesFor pkgs.linux_samus_latest);
+  linuxPackages_samus_latest = linuxPackages_samus_4_12;
+  linux_samus_latest = linuxPackages_samus_latest.kernel;
 
   # A function to build a manually-configured kernel
-  linuxManualConfig = pkgs.buildLinux;
-  buildLinux = makeOverridable (callPackage ../os-specific/linux/kernel/manual-config.nix {});
+  linuxManualConfig = makeOverridable (callPackage ../os-specific/linux/kernel/manual-config.nix {});
+  buildLinux = makeOverridable (callPackage ../os-specific/linux/kernel/generic.nix {});
 
   keyutils = callPackage ../os-specific/linux/keyutils { };
 
@@ -13264,6 +13453,17 @@ with pkgs;
   multipath-tools = callPackage ../os-specific/linux/multipath-tools { };
 
   musl = callPackage ../os-specific/linux/musl { };
+  musl-fts = callPackage ../os-specific/linux/musl/fts.nix { };
+  musl-getconf = callPackage ../os-specific/linux/musl/getconf.nix { };
+  musl-getent = callPackage ../os-specific/linux/musl/getent.nix { };
+  getent =
+    if hostPlatform.isMusl then musl-getent
+    # This may not be right on other platforms, but preserves existing behavior
+    else /* if hostPlatform.libc == "glibc" then */ glibc.bin;
+
+  getconf =
+    if hostPlatform.isMusl then musl-getconf
+    else lib.getBin stdenv.cc.libc;
 
   nettools = callPackage ../os-specific/linux/net-tools { };
 
@@ -13290,6 +13490,11 @@ with pkgs;
 
   go-protobuf = callPackage ../development/tools/go-protobuf { };
 
+
+  go-symbols = callPackage ../development/tools/go-symbols { };
+
+  go-outline = callPackage ../development/tools/go-outline { };
+
   gocode = callPackage ../development/tools/gocode { };
 
   goconvey = callPackage ../development/tools/goconvey { };
@@ -13304,10 +13509,16 @@ with pkgs;
 
   goimports = callPackage ../development/tools/goimports { };
 
+  gopkgs = callPackage ../development/tools/gopkgs { };
+
   govers = callPackage ../development/tools/govers { };
 
   gotools = callPackage ../development/tools/gotools { };
 
+  gomodifytags = callPackage ../development/tools/gomodifytags { };
+
+  gotests = callPackage ../development/tools/gotests { };
+
   gogoclient = callPackage ../os-specific/linux/gogoclient { };
 
   nss_ldap = callPackage ../os-specific/linux/nss_ldap { };
@@ -13402,6 +13613,12 @@ with pkgs;
 
   rfkill_udev = callPackage ../os-specific/linux/rfkill/udev.nix { };
 
+  riscv-pk = callPackage ../misc/riscv-pk { };
+
+  riscv-pk-with-kernel = riscv-pk.override {
+    payload = "${linux_riscv}/vmlinux";
+  };
+
   rtkit = callPackage ../os-specific/linux/rtkit { };
 
   rt5677-firmware = callPackage ../os-specific/linux/firmware/rt5677 { };
@@ -13642,7 +13859,7 @@ with pkgs;
 
   inherit (callPackage ../os-specific/linux/zfs {
     configFile = "user";
-  }) zfsStable zfsUnstable;
+  }) zfsStable zfsUnstable zfsLegacyCrypto;
 
   zfs = zfsStable;
 
@@ -13758,6 +13975,8 @@ with pkgs;
 
   faba-mono-icons = callPackage ../data/icons/faba-mono-icons { };
 
+  fixedsys-excelsior = callPackage ../data/fonts/fixedsys-excelsior { };
+
   emacs-all-the-icons-fonts = callPackage ../data/fonts/emacs-all-the-icons-fonts { };
 
   emojione = callPackage ../data/fonts/emojione {
@@ -13950,6 +14169,8 @@ with pkgs;
 
   papirus-icon-theme = callPackage ../data/icons/papirus-icon-theme { };
 
+  papis = python3Packages.callPackage ../tools/misc/papis { };
+
   pecita = callPackage ../data/fonts/pecita {};
 
   paratype-pt-mono = callPackage ../data/fonts/paratype-pt/mono.nix {};
@@ -14056,6 +14277,8 @@ with pkgs;
 
   terminus_font_ttf = callPackage ../data/fonts/terminus-font-ttf { };
 
+  tex-gyre = callPackage ../data/fonts/tex-gyre { };
+
   tex-gyre-bonum-math = callPackage ../data/fonts/tex-gyre-math { variant = "bonum"; };
 
   tex-gyre-pagella-math = callPackage ../data/fonts/tex-gyre-math { variant = "pagella"; };
@@ -14406,6 +14629,7 @@ with pkgs;
   blender = callPackage  ../applications/misc/blender {
     cudaSupport = config.cudaSupport or false;
     python = python35;
+    stdenv = overrideCC stdenv gcc6;
   };
 
   bluefish = callPackage ../applications/editors/bluefish {
@@ -14462,12 +14686,12 @@ with pkgs;
 
   carddav-util = callPackage ../tools/networking/carddav-util { };
 
-  catfish = callPackage ../applications/search/catfish {
-    pythonPackages = python2Packages;
-  };
+  catfish = callPackage ../applications/search/catfish { };
 
   cava = callPackage ../applications/audio/cava { };
 
+  cask = callPackage ../development/tools/build-managers/cask { };
+
   cb2bib = libsForQt5.callPackage ../applications/office/cb2bib { };
 
   cbatticon = callPackage ../applications/misc/cbatticon { };
@@ -14618,7 +14842,6 @@ with pkgs;
   });
 
   darktable = callPackage ../applications/graphics/darktable {
-    inherit (gnome2) GConf libglade;
     lua = lua5_3;
     pugixml = pugixml.override { shared = true; };
   };
@@ -14679,10 +14902,10 @@ with pkgs;
 
   inherit (callPackage ../applications/virtualization/docker { })
     docker_17_12
-    docker_18_01;
+    docker_18_02;
 
   docker = docker_17_12;
-  docker-edge = docker_18_01;
+  docker-edge = docker_18_02;
 
   docker-proxy = callPackage ../applications/virtualization/docker/proxy.nix { };
 
@@ -14696,6 +14919,8 @@ with pkgs;
 
   docker-distribution = callPackage ../applications/virtualization/docker-distribution { };
 
+  docker-credential-gcr = callPackage ../tools/admin/docker-credential-gcr { };
+
   doodle = callPackage ../applications/search/doodle { };
 
   dr14_tmeter = callPackage ../applications/audio/dr14_tmeter { };
@@ -14946,8 +15171,6 @@ with pkgs;
   emacs25Packages = emacsPackagesGen emacs25 pkgs.emacs25Packages;
 
   emacsPackagesNgGen = emacs: import ./emacs-packages.nix {
-    overrides = (config.emacsPackageOverrides or (p: {})) pkgs;
-
     inherit lib newScope stdenv;
     inherit fetchFromGitHub fetchgit fetchhg fetchurl;
     inherit emacs texinfo makeWrapper runCommand;
@@ -15055,8 +15278,9 @@ with pkgs;
 
   fldigi = callPackage ../applications/audio/fldigi { };
 
-  flink = flink_1_3;
+  flink = flink_1_4;
   flink_1_3 = callPackage ../applications/networking/cluster/flink { version = "1.3"; };
+  flink_1_4 = callPackage ../applications/networking/cluster/flink { version = "1.4"; };
 
   fluidsynth = callPackage ../applications/audio/fluidsynth {
      inherit (darwin.apple_sdk.frameworks) AudioUnit CoreAudio CoreMIDI CoreServices;
@@ -15091,6 +15315,8 @@ with pkgs;
   geany = callPackage ../applications/editors/geany { };
   geany-with-vte = callPackage ../applications/editors/geany/with-vte.nix { };
 
+  ghostwriter = libsForQt5.callPackage ../applications/editors/ghostwriter { };
+
   gksu = callPackage ../applications/misc/gksu { };
 
   gnss-sdr = callPackage ../applications/misc/gnss-sdr { };
@@ -15814,6 +16040,7 @@ with pkgs;
 
   k3d = callPackage ../applications/graphics/k3d {
     inherit (pkgs.gnome2) gtkglext;
+    stdenv = overrideCC stdenv gcc6;
   };
 
   k9copy = libsForQt5.callPackage ../applications/video/k9copy {};
@@ -15906,6 +16133,10 @@ with pkgs;
 
   kubernetes = callPackage ../applications/networking/cluster/kubernetes {  };
 
+  kubectl = (kubernetes.override { components = [ "cmd/kubectl" ]; }).overrideAttrs(oldAttrs: {
+    name = "kubectl-${oldAttrs.version}";
+  });
+
   kubernetes-helm = callPackage ../applications/networking/cluster/helm { };
 
   kupfer = callPackage ../applications/misc/kupfer { };
@@ -16346,12 +16577,8 @@ with pkgs;
 
   ostinato = callPackage ../applications/networking/ostinato { };
 
-  panamax_api = callPackage ../applications/networking/cluster/panamax/api {
-    ruby = ruby_2_1;
-  };
-  panamax_ui = callPackage ../applications/networking/cluster/panamax/ui {
-    ruby = ruby_2_1;
-  };
+  panamax_api = callPackage ../applications/networking/cluster/panamax/api { };
+  panamax_ui = callPackage ../applications/networking/cluster/panamax/ui { };
 
   partio = callPackage ../development/libraries/partio {};
 
@@ -16389,6 +16616,8 @@ with pkgs;
 
   smtube = libsForQt5.callPackage ../applications/video/smtube {};
 
+  stride = callPackage ../applications/networking/instant-messengers/stride { };
+
   sudolikeaboss = callPackage ../tools/security/sudolikeaboss { };
 
   speedread = callPackage ../applications/misc/speedread { };
@@ -16436,7 +16665,9 @@ with pkgs;
 
   mupdf = callPackage ../applications/misc/mupdf { };
 
-  diffpdf = callPackage ../applications/misc/diffpdf { };
+  diffpdf = libsForQt5.callPackage ../applications/misc/diffpdf { };
+
+  diff-pdf = callPackage ../applications/misc/diff-pdf { wxGTK = wxGTK31; };
 
   mlocate = callPackage ../tools/misc/mlocate { };
 
@@ -16521,7 +16752,9 @@ with pkgs;
 
   openfx = callPackage ../development/libraries/openfx {};
 
-  openimageio = callPackage ../applications/graphics/openimageio { };
+  openimageio = callPackage ../applications/graphics/openimageio {
+    stdenv = overrideCC stdenv gcc6;
+  };
 
   openjump = callPackage ../applications/misc/openjump { };
 
@@ -16564,6 +16797,8 @@ with pkgs;
 
   pamixer = callPackage ../applications/audio/pamixer { };
 
+  ncpamixer = callPackage ../applications/audio/ncpamixer { };
+
   pan = callPackage ../applications/networking/newsreaders/pan {
     spellChecking = false;
   };
@@ -16742,6 +16977,8 @@ with pkgs;
 
   ptask = callPackage ../applications/misc/ptask { };
 
+  pulseaudio-dlna = callPackage ../applications/audio/pulseaudio-dlna { };
+
   pulseview = libsForQt5.callPackage ../applications/science/electronics/pulseview { };
 
   puredata = callPackage ../applications/audio/puredata { };
@@ -16769,6 +17006,8 @@ with pkgs;
     inherit (darwin.stubs) rez setfile;
   };
 
+  qemu-riscv = callPackage ../applications/virtualization/qemu/riscv.nix {};
+
   qgis = callPackage ../applications/gis/qgis {};
 
   qgroundcontrol = libsForQt5.callPackage ../applications/science/robotics/qgroundcontrol { };
@@ -16777,6 +17016,8 @@ with pkgs;
 
   qmapshack = libsForQt5.callPackage ../applications/misc/qmapshack { };
 
+  qmediathekview = libsForQt5.callPackage ../applications/video/qmediathekview { };
+
   qmetro = callPackage ../applications/misc/qmetro { };
 
   qmidinet = callPackage ../applications/audio/qmidinet { };
@@ -16795,8 +17036,7 @@ with pkgs;
     qt = qt4;
   };
 
-  # 0.5.7 segfaults when opening the main panel with qt 5.7 and fails to compile with qt 5.8
-  qsyncthingtray = libsForQt56.callPackage ../applications/misc/qsyncthingtray { };
+  qsyncthingtray = libsForQt5.callPackage ../applications/misc/qsyncthingtray { };
 
   qstopmotion = callPackage ../applications/video/qstopmotion { };
 
@@ -16997,6 +17237,8 @@ with pkgs;
     vte = gnome3.vte;
   };
 
+  sayonara = callPackage ../applications/audio/sayonara { };
+
   sbagen = callPackage ../applications/misc/sbagen { };
 
   scantailor = callPackage ../applications/graphics/scantailor { };
@@ -17135,6 +17377,8 @@ with pkgs;
 
   slic3r = callPackage ../applications/misc/slic3r { };
 
+  slic3r-prusa3d = callPackage ../applications/misc/slic3r-prusa3d { };
+
   curaengine_stable = callPackage ../applications/misc/curaengine/stable.nix { };
   cura_stable = callPackage ../applications/misc/cura/stable.nix {
     curaengine = curaengine_stable;
@@ -17256,6 +17500,8 @@ with pkgs;
 
   surf = callPackage ../applications/networking/browsers/surf { gtk = gtk2; };
 
+  sunvox = callPackage ../applications/audio/sunvox { };
+
   swh_lv2 = callPackage ../applications/audio/swh-lv2 { };
 
   sylpheed = callPackage ../applications/networking/mailreaders/sylpheed { };
@@ -17264,11 +17510,11 @@ with pkgs;
 
   syncplay = callPackage ../applications/networking/syncplay { };
 
-  syncthing = callPackage ../applications/networking/syncthing { };
-
-  syncthing012 = callPackage ../applications/networking/syncthing012 { };
-
-  syncthing013 = callPackage ../applications/networking/syncthing013 { };
+  inherit (callPackages ../applications/networking/syncthing { })
+    syncthing
+    syncthing-cli
+    syncthing-discovery
+    syncthing-relay;
 
   syncthing-gtk = python2Packages.callPackage ../applications/networking/syncthing-gtk { };
 
@@ -17302,7 +17548,7 @@ with pkgs;
   teamspeak_client = libsForQt5.callPackage ../applications/networking/instant-messengers/teamspeak/client.nix { };
   teamspeak_server = callPackage ../applications/networking/instant-messengers/teamspeak/server.nix { };
 
-  taskjuggler = callPackage ../applications/misc/taskjuggler { ruby = ruby_2_0; };
+  uaskjuggler = callPackage ../applications/misc/taskjuggler { };
 
   tasknc = callPackage ../applications/misc/tasknc { };
 
@@ -17522,7 +17768,7 @@ with pkgs;
     inherit (gnome3) defaultIconTheme;
   };
 
-  macvim = callPackage ../applications/editors/vim/macvim.nix { stdenv = clangStdenv; ruby = ruby_2_2; };
+  macvim = callPackage ../applications/editors/vim/macvim.nix { stdenv = clangStdenv; };
 
   vimHugeX = vim_configurable;
 
@@ -17862,6 +18108,8 @@ with pkgs;
       );
   };
 
+  wsjtx = qt5.callPackage ../applications/misc/wsjtx { };
+
   wtftw = callPackage ../applications/window-managers/wtftw {};
 
   wxhexeditor = callPackage ../applications/editors/wxhexeditor { };
@@ -17922,7 +18170,6 @@ with pkgs;
   };
   xbmc-retroarch-advanced-launchers = kodi-retroarch-advanced-launchers;
 
-  # v1.3.2 segfaults with qt 5.7
   xca = libsForQt5.callPackage ../applications/misc/xca { };
 
   xcalib = callPackage ../tools/X11/xcalib { };
@@ -18113,6 +18360,8 @@ with pkgs;
 
   inherit (gnome3) yelp;
 
+  yokadi = python3Packages.callPackage ../applications/misc/yokadi {};
+
   yoshimi = callPackage ../applications/audio/yoshimi { };
 
   inherit (pythonPackages) youtube-dl;
@@ -18181,7 +18430,9 @@ with pkgs;
 
   armagetronad = callPackage ../games/armagetronad { };
 
-  arx-libertatis = callPackage ../games/arx-libertatis { };
+  arx-libertatis = callPackage ../games/arx-libertatis {
+    stdenv = overrideCC stdenv gcc6;
+  };
 
   asc = callPackage ../games/asc {
     lua = lua5_1;
@@ -18189,6 +18440,8 @@ with pkgs;
     physfs = physfs_2;
   };
 
+  assaultcube = callPackage ../games/assaultcube { };
+
   astromenace = callPackage ../games/astromenace { };
 
   atanks = callPackage ../games/atanks {};
@@ -18233,6 +18486,7 @@ with pkgs;
 
   cataclysm-dda = callPackage ../games/cataclysm-dda {
     inherit (darwin.apple_sdk.frameworks) Cocoa;
+    ncurses = ncurses5;
   };
 
   cataclysm-dda-git = callPackage ../games/cataclysm-dda/git.nix {
@@ -18302,10 +18556,18 @@ with pkgs;
     physfs = physfs_2;
   };
 
+  # these are here for compatibility
   d1x_rebirth = dxx-rebirth;
-
   d2x_rebirth = dxx-rebirth;
 
+  inherit (callPackages ../games/dxx-rebirth/assets.nix { })
+    descent1-assets
+    descent2-assets;
+
+  inherit (callPackages ../games/dxx-rebirth/full.nix { })
+    d1x-rebirth-full
+    d2x-rebirth-full;
+
   easyrpg-player = callPackage ../games/easyrpg-player { };
 
   eboard = callPackage ../games/eboard { };
@@ -18326,6 +18588,8 @@ with pkgs;
 
   factorio = callPackage ../games/factorio { releaseType = "alpha"; };
 
+  factorio-experimental = callPackage ../games/factorio { releaseType = "alpha"; experimental = true; };
+
   factorio-headless = callPackage ../games/factorio { releaseType = "headless"; };
 
   factorio-demo = callPackage ../games/factorio { releaseType = "demo"; };
@@ -18342,6 +18606,8 @@ with pkgs;
 
   flightgear = libsForQt5.callPackage ../games/flightgear { };
 
+  flock = callPackage ../development/tools/flock { };
+
   freecell-solver = callPackage ../games/freecell-solver { };
 
   freeciv = callPackage ../games/freeciv { };
@@ -18476,7 +18742,9 @@ with pkgs;
     libpng = libpng12;
   };
 
-  mnemosyne = callPackage ../games/mnemosyne { };
+  mnemosyne = callPackage ../games/mnemosyne {
+    python = python3;
+  };
 
   mrrescue = callPackage ../games/mrrescue { };
 
@@ -18518,9 +18786,7 @@ with pkgs;
 
   openmw = callPackage ../games/openmw { };
 
-  openmw-tes3mp = libsForQt5.callPackage ../games/openmw/tes3mp.nix {
-    stdenv = overrideCC stdenv gcc7;
-  };
+  openmw-tes3mp = libsForQt5.callPackage ../games/openmw/tes3mp.nix { };
 
   openra = callPackage ../games/openra { lua = lua5_1; };
 
@@ -18577,6 +18843,7 @@ with pkgs;
   quake3pointrelease = callPackage ../games/quake3/content/pointrelease.nix { };
 
   quakespasm = callPackage ../games/quakespasm { };
+  vkquake = callPackage ../games/quakespasm/vulkan.nix { };
 
   ioquake3 = callPackage ../games/quake3/ioquake { };
 
@@ -18829,6 +19096,7 @@ with pkgs;
     tk = tk-8_5;
   };
 
+  xjump = callPackage ../games/xjump { };
   # TODO: the corresponding nix file is missing
   # xracer = callPackage ../games/xracer { };
 
@@ -18896,6 +19164,8 @@ with pkgs;
   gnome3 = recurseIntoAttrs (callPackage ../desktops/gnome-3 { });
 
   gnomeExtensions = {
+    appindicator = callPackage ../desktops/gnome-3/extensions/appindicator { };
+    battery-status = callPackage ../desktops/gnome-3/extensions/battery-status { };
     caffeine = callPackage ../desktops/gnome-3/extensions/caffeine { };
     clipboard-indicator = callPackage ../desktops/gnome-3/extensions/clipboard-indicator { };
     dash-to-dock = callPackage ../desktops/gnome-3/extensions/dash-to-dock { };
@@ -18904,6 +19174,8 @@ with pkgs;
     mediaplayer = callPackage ../desktops/gnome-3/extensions/mediaplayer { };
     nohotcorner = callPackage ../desktops/gnome-3/extensions/nohotcorner { };
     pixel-saver = callPackage ../desktops/gnome-3/extensions/pixel-saver { };
+    remove-dropdown-arrows = callPackage ../desktops/gnome-3/extensions/remove-dropdown-arrows { };
+    taskwhisperer = callPackage ../desktops/gnome-3/extensions/taskwhisperer { };
     topicons-plus = callPackage ../desktops/gnome-3/extensions/topicons-plus { };
   };
 
@@ -18975,7 +19247,7 @@ with pkgs;
       mkPlasma5 = import ../desktops/plasma-5;
       attrs = {
         inherit libsForQt5 lib fetchurl;
-        inherit (gnome3) gconf;
+        inherit (gnome3) gconf gsettings_desktop_schemas;
       };
     in
       recurseIntoAttrs (makeOverridable mkPlasma5 attrs);
@@ -18989,7 +19261,7 @@ with pkgs;
     kwallet-pam kwayland-integration kwin kwrited milou oxygen plasma-desktop
     plasma-integration plasma-nm plasma-pa plasma-vault plasma-workspace
     plasma-workspace-wallpapers polkit-kde-agent powerdevil sddm-kcm
-    systemsettings;
+    systemsettings xdg-desktop-portal-kde;
 
   ### SCIENCE
 
@@ -19063,7 +19335,14 @@ with pkgs;
 
   plink-ng = callPackage ../applications/science/biology/plink-ng/default.nix { };
 
+  raxml = callPackage ../applications/science/biology/raxml { };
+
+  raxml-mpi = appendToName "mpi" (raxml.override {
+    mpi = true;
+  });
+
   samtools = callPackage ../applications/science/biology/samtools/default.nix { };
+  samtools_0_1_19 = callPackage ../applications/science/biology/samtools/samtools_0_1_19.nix { };
 
   snpeff = callPackage ../applications/science/biology/snpeff/default.nix { };
 
@@ -19368,7 +19647,7 @@ with pkgs;
   };
 
   z3_4_5_0 = callPackage ../applications/science/logic/z3/4.5.0.nix {};
-  z3 = callPackage ../applications/science/logic/z3 {};
+  z3 = callPackage ../applications/science/logic/z3 { python = python2; };
 
   aiger = callPackage ../applications/science/logic/aiger {};
 
@@ -19423,6 +19702,13 @@ with pkgs;
     cudnnSupport = cudaSupport;
   };
 
+  caffe2 = callPackage ../development/libraries/science/math/caffe2 {
+    eigen3 = eigen3_3;
+    inherit (python3Packages) python future six numpy pydot;
+    protobuf = protobuf3_1;
+    python-protobuf = python3Packages.protobuf3_1;
+  };
+
   cntk = callPackage ../applications/science/math/cntk rec {
     cudaSupport = pkgs.config.cudaSupport or false;
     cudnnSupport = cudaSupport;
@@ -19470,6 +19756,8 @@ with pkgs;
 
   pcalc = callPackage ../applications/science/math/pcalc { };
 
+  bcal = callPackage ../applications/science/math/bcal { };
+
   pspp = callPackage ../applications/science/math/pspp {
     inherit (gnome3) gtksourceview;
   };
@@ -19643,6 +19931,7 @@ with pkgs;
   cups-toshiba-estudio = callPackage ../misc/cups/drivers/estudio {};
 
   crashplan = callPackage ../applications/backup/crashplan { };
+  crashplansb = callPackage ../applications/backup/crashplan/crashplan-small-business.nix { inherit (gnome3) gconf; };
 
   colort = callPackage ../applications/misc/colort { };
 
@@ -19717,7 +20006,7 @@ with pkgs;
   faust1 = callPackage ../applications/audio/faust/faust1.nix { };
 
   faust2 = callPackage ../applications/audio/faust/faust2.nix {
-    llvm = llvm_4;
+    llvm = llvm_5;
   };
 
   faust2alqt = callPackage ../applications/audio/faust/faust2alqt.nix { };
@@ -19794,8 +20083,12 @@ with pkgs;
 
   hplipWithPlugin_3_16_11 = hplip.override { withPlugin = true; };
 
+  hyperfine = callPackage ../tools/misc/hyperfine { };
+
   epkowa = callPackage ../misc/drivers/epkowa { };
 
+  idsk = callPackage ../tools/filesystems/idsk { };
+
   illum = callPackage ../tools/system/illum { };
 
   # using the new configuration style proposal which is unstable
@@ -19856,6 +20149,8 @@ with pkgs;
 
   nixopsUnstable = lowPrio (callPackage ../tools/package-management/nixops/unstable.nix { });
 
+  nixops-dns = callPackage ../tools/package-management/nixops/nixops-dns.nix { };
+
   nixui = callPackage ../tools/package-management/nixui { node_webkit = nwjs_0_12; };
 
   nix-bundle = callPackage ../tools/package-management/nix-bundle { };
@@ -20021,6 +20316,9 @@ with pkgs;
   mfcl2700dncupswrapper = callPackage ../misc/cups/drivers/mfcl2700dncupswrapper { };
   mfcl2700dnlpr = callPackage_i686 ../misc/cups/drivers/mfcl2700dnlpr { };
 
+  mfcl2720dwcupswrapper = callPackage ../misc/cups/drivers/mfcl2720dwcupswrapper { };
+  mfcl2720dwlpr = callPackage ../misc/cups/drivers/mfcl2720dwlpr { };
+
   samsung-unified-linux-driver_1_00_37 = callPackage ../misc/cups/drivers/samsung { };
   samsung-unified-linux-driver_4_01_17 = callPackage ../misc/cups/drivers/samsung/4.01.17.nix { };
   samsung-unified-linux-driver = callPackage ../misc/cups/drivers/samsung/4.00.39 { };
@@ -20092,6 +20390,8 @@ with pkgs;
 
   terraform-inventory = callPackage ../applications/networking/cluster/terraform-inventory {};
 
+  terraform-landscape = callPackage ../applications/networking/cluster/terraform-landscape {};
+
   terragrunt = callPackage ../applications/networking/cluster/terragrunt {};
 
   terragrunt_0_11_1 = callPackage ../applications/networking/cluster/terragrunt/0.11.1.nix {
@@ -20360,7 +20660,10 @@ with pkgs;
 
   spdlog = callPackage ../development/libraries/spdlog { };
 
-  dart = callPackage ../development/interpreters/dart { };
+  dart = dart_stable;
+  dart_old = callPackage ../development/interpreters/dart { version = "1.16.1"; };
+  dart_stable = callPackage ../development/interpreters/dart { version = "1.24.3"; };
+  dart_dev = callPackage ../development/interpreters/dart { version = "2.0.0-dev.26.0"; };
 
   httrack = callPackage ../tools/backup/httrack { };
 
@@ -20450,6 +20753,8 @@ with pkgs;
     cc-wrapper-libcxx = callPackage ../test/cc-wrapper { stdenv = llvmPackages.libcxxStdenv; };
     cc-wrapper-clang-39 = callPackage ../test/cc-wrapper { stdenv = llvmPackages_39.stdenv; };
     cc-wrapper-libcxx-39 = callPackage ../test/cc-wrapper { stdenv = llvmPackages_39.libcxxStdenv; };
+    cc-wrapper-clang-4 = callPackage ../test/cc-wrapper { stdenv = llvmPackages_4.stdenv; };
+    cc-wrapper-libcxx-4 = callPackage ../test/cc-wrapper { stdenv = llvmPackages_4.libcxxStdenv; };
     cc-wrapper-clang-5 = callPackage ../test/cc-wrapper { stdenv = llvmPackages_5.stdenv; };
     cc-wrapper-libcxx-5 = callPackage ../test/cc-wrapper { stdenv = llvmPackages_5.libcxxStdenv; };
     stdenv-inputs = callPackage ../test/stdenv-inputs { };
@@ -20471,4 +20776,6 @@ with pkgs;
   tlwg = callPackage ../data/fonts/tlwg { };
 
   safeDiscardStringContext = callPackage ../build-support/safe-discard-string-context.nix { };
+
+  simplehttp2server = callPackage ../servers/simplehttp2server { };
 }
diff --git a/pkgs/top-level/coq-packages.nix b/pkgs/top-level/coq-packages.nix
index c27a2e7d39d8..419fc485dd01 100644
--- a/pkgs/top-level/coq-packages.nix
+++ b/pkgs/top-level/coq-packages.nix
@@ -69,13 +69,13 @@ in rec {
     version = "8.6.1";
   };
   coq_8_7 = callPackage ../applications/science/logic/coq {
-    version = "8.7.1";
+    version = "8.7.2";
   };
 
   coqPackages_8_5 = mkCoqPackages coq_8_5;
   coqPackages_8_6 = mkCoqPackages coq_8_6;
   coqPackages_8_7 = mkCoqPackages coq_8_7;
-  coqPackages = coqPackages_8_6;
+  coqPackages = coqPackages_8_7;
   coq = coqPackages.coq;
 
 }
diff --git a/pkgs/top-level/darwin-packages.nix b/pkgs/top-level/darwin-packages.nix
index e75c9338f8d4..1f8039010d7b 100644
--- a/pkgs/top-level/darwin-packages.nix
+++ b/pkgs/top-level/darwin-packages.nix
@@ -44,6 +44,8 @@ in
   };
 
   libobjc = apple-source-releases.objc4;
+  
+  lsusb = callPackage ../os-specific/darwin/lsusb { };
 
   opencflite = callPackage ../os-specific/darwin/opencflite { };
 
diff --git a/pkgs/top-level/dotnet-packages.nix b/pkgs/top-level/dotnet-packages.nix
index 1a37d58c70d1..43182b3f2aaa 100644
--- a/pkgs/top-level/dotnet-packages.nix
+++ b/pkgs/top-level/dotnet-packages.nix
@@ -331,13 +331,20 @@ let self = dotnetPackages // overrides; dotnetPackages = with self; {
 
   Dafny = buildDotnetPackage rec {
     baseName = "Dafny";
-    version = "1.9.8";
+    version = "2.1.0";
 
     src = fetchurl {
       url = "https://github.com/Microsoft/dafny/archive/v${version}.tar.gz";
-      sha256 = "0n4pk4cv7d2zsn4xmyjlxvpfl9avq79r06c7kzmrng24p3k4qj6s";
+      sha256 = "1iyhy0zpi6wvqif7826anzgdipgsy5bk775ds9qqwfw27j7x6fy5";
     };
 
+    postPatch = ''
+      sed -i \
+        -e 's/ Visible="False"//' \
+        -e "s/Exists(\$(CodeContractsInstallDir))/Exists('\$(CodeContractsInstallDir)')/" \
+        Source/*/*.csproj
+    '';
+
     preBuild = ''
       ln -s ${pkgs.z3} Binaries/z3
     '';
@@ -345,7 +352,7 @@ let self = dotnetPackages // overrides; dotnetPackages = with self; {
     buildInputs = [ Boogie ];
 
     xBuildFiles = [ "Source/Dafny.sln" ];
-    xBuildFlags = [ ];
+    xBuildFlags = [ "/p:Configuration=Checked" "/p:Platform=Any CPU" "/t:Rebuild" ];
 
     outputFiles = [ "Binaries/*" ];
 
diff --git a/pkgs/top-level/emacs-packages.nix b/pkgs/top-level/emacs-packages.nix
index 3acc6d0ebec6..99863eb76a88 100644
--- a/pkgs/top-level/emacs-packages.nix
+++ b/pkgs/top-level/emacs-packages.nix
@@ -32,9 +32,7 @@
 #   `meta` with `platforms` and `homepage` set to something you are
 #   unlikely to want to override for most packages
 
-{ overrides
-
-, lib, newScope, stdenv, fetchurl, fetchgit, fetchFromGitHub, fetchhg, runCommand
+{ lib, newScope, stdenv, fetchurl, fetchgit, fetchFromGitHub, fetchhg, runCommand
 
 , emacs, texinfo, lndir, makeWrapper
 , trivialBuild
diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix
index c44124c3ffff..10eb72da19eb 100644
--- a/pkgs/top-level/ocaml-packages.nix
+++ b/pkgs/top-level/ocaml-packages.nix
@@ -60,6 +60,8 @@ let
 
     bitstring = callPackage ../development/ocaml-modules/bitstring { };
 
+    bitv = callPackage ../development/ocaml-modules/bitv { };
+
     bolt = callPackage ../development/ocaml-modules/bolt { };
 
     bos = callPackage ../development/ocaml-modules/bos { };
@@ -375,6 +377,10 @@ let
       lwt = lwt3;
     };
 
+    lwt_ssl = callPackage ../development/ocaml-modules/lwt_ssl {
+      lwt = lwt3;
+    };
+
     macaque = callPackage ../development/ocaml-modules/macaque { };
 
     magic-mime = callPackage ../development/ocaml-modules/magic-mime { };
diff --git a/pkgs/top-level/perl-packages.nix b/pkgs/top-level/perl-packages.nix
index 22bb6acf81d6..6ebbd816d4d6 100644
--- a/pkgs/top-level/perl-packages.nix
+++ b/pkgs/top-level/perl-packages.nix
@@ -716,10 +716,10 @@ let self = _self // overrides; _self = with self; {
   };
 
   bignum = buildPerlPackage rec {
-    name = "bignum-0.47";
+    name = "bignum-0.49";
     src = fetchurl {
       url = "mirror://cpan/authors/id/P/PJ/PJACKLAM/${name}.tar.gz";
-      sha256 = "b084eac6d676d2acc4d60deed58e6e31b2f572b7b0be1aec9b93be92bad8261a";
+      sha256 = "28685b271251927d327851e5951e38649524a4e50cb0d1d35d649e2b814f212d";
     };
     buildInputs = [ MathBigInt MathBigRat ];
     meta = {
@@ -780,6 +780,20 @@ let self = _self // overrides; _self = with self; {
     perlPreHook = "export LD=$CC";
   };
 
+  BSDResource = buildPerlPackage rec {
+    name = "BSD-Resource-1.2911";
+    src = fetchurl {
+      url = "https://cpan.metacpan.org/authors/id/J/JH/JHI/BSD-Resource-1.2911.tar.gz";
+      sha256 = "0g8c7825ng2m0yz5sy6838rvfdl8j3vm29524wjgf66ccfhgn74x";
+    };
+    buildInputs = [ TestPod TestPodCoverage ];
+    meta = {
+      maintainers = [ maintainers.limeytexan ];
+      description = "BSD process resource limit and priority functions";
+      license = stdenv.lib.licenses.artistic2;
+    };
+  };
+
   BusinessHours = buildPerlPackage rec {
     name = "Business-Hours-0.12";
     src = fetchurl {
@@ -2544,10 +2558,10 @@ let self = _self // overrides; _self = with self; {
   };
 
   CpanelJSONXS = buildPerlPackage rec {
-    name = "Cpanel-JSON-XS-4.00";
+    name = "Cpanel-JSON-XS-4.01";
     src = fetchurl {
       url = "mirror://cpan/authors/id/R/RU/RURBAN/${name}.tar.gz";
-      sha256 = "4dedf770cab3009b08bca108266b941097ae1c55c674c500e3145e2f23a628ac";
+      sha256 = "c8cfd32a8a9508ab7f280452428582c3e46d0bed4ea863c3ec27c34f6920de60";
     };
     meta = {
       description = "CPanel fork of JSON::XS, fast and correct serializing";
@@ -2722,10 +2736,10 @@ let self = _self // overrides; _self = with self; {
   };
 
   CryptJWT = buildPerlPackage rec {
-    name = "Crypt-JWT-0.019";
+    name = "Crypt-JWT-0.020";
     src = fetchurl {
       url = "mirror://cpan/authors/id/M/MI/MIK/${name}.tar.gz";
-      sha256 = "26aaaaedc153b04bdaaba7df7ac2f7ce3bdf672c8d7111d09347a8d0c794725c";
+      sha256 = "0587fc11435aecbbdc19b33f774d05ff31f19750b26a3588af93f33e8000d464";
     };
     propagatedBuildInputs = [ CryptX JSONMaybeXS ];
     meta = {
@@ -4834,10 +4848,10 @@ let self = _self // overrides; _self = with self; {
   };
 
   Encode = buildPerlPackage rec {
-    name = "Encode-2.93";
+    name = "Encode-2.96";
     src = fetchurl {
       url = "mirror://cpan/authors/id/D/DA/DANKOGAI/${name}.tar.gz";
-      sha256 = "2d06b0375c84a75cf3762685e6d94c3aef25833fd0427daa0ae87b04ae6f739c";
+      sha256 = "5dcb19fa5e62c6ca9294f28e9f4676f36477b1025f7e0dca92479633334b3cb1";
     };
     meta = {
       description = "Character encodings in Perl";
@@ -6278,6 +6292,22 @@ let self = _self // overrides; _self = with self; {
     buildInputs = [ DataUUID CryptCBC ];
   };
 
+  GSSAPI = buildPerlPackage rec {
+    name = "GSSAPPI-0.28";
+    src = fetchurl {
+      url = "http://search.cpan.org/CPAN/authors/id/A/AG/AGROLMS/GSSAPI-0.28.tar.gz";
+      sha256 = "1mkhwxjjlhr58pd770i9gnf7zy7jj092iv6jfbnb8bvnc5xjr3vx";
+    };
+    buildInputs = [ TestPod ];
+    propagatedBuildInputs = [ pkgs.heimdalFull ];
+    meta = {
+      maintainers = [ maintainers.limeytexan ];
+      description = "Perl extension providing access to the GSSAPIv2 library";
+      license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ];
+    };
+    makeMakerFlags = "--gssapiimpl ${pkgs.heimdalFull.out}";
+  };
+
   Gtk2 = buildPerlPackage rec {
     name = "Gtk2-1.2498";
     src = fetchurl {
@@ -6289,6 +6319,33 @@ let self = _self // overrides; _self = with self; {
       homepage = http://gtk2-perl.sourceforge.net/;
       description = "Perl interface to the 2.x series of the Gimp Toolkit library";
       license = stdenv.lib.licenses.lgpl21Plus;
+      platforms   = stdenv.lib.platforms.linux;
+    };
+  };
+
+  Gtk2GladeXML = buildPerlPackage rec {
+    name = "Gtk2-GladeXML-1.007";
+    src = fetchurl {
+      url = "mirror://cpan/authors/id/T/TS/TSCH/${name}.tar.gz";
+      sha256 = "50240a2bddbda807c8f8070de941823b7bf3d288a13be6d0d6563320b42c445a";
+    };
+    propagatedBuildInputs = [ ExtUtilsDepends ExtUtilsPkgConfig Glib Gtk2 Pango pkgs.gnome2.libglade pkgs.gtk2 ];
+    meta = {
+      homepage = https://metacpan.org/pod/Gtk2::GladeXML;
+      description = "Create user interfaces directly from Glade XML files";
+      license = stdenv.lib.licenses.lgpl2Plus;
+    };
+  };
+
+  Gtk2TrayIcon = buildPerlPackage rec {
+    name = "Gtk2-TrayIcon-0.06";
+    src = fetchurl {
+      url = "mirror://cpan/authors/id/B/BO/BORUP/${name}.tar.gz";
+      sha256 = "cbb7632b75d7f41554dfe8ee9063dbfd1d8522291077c65d0d82e9ceb5e94ae2";
+    };
+    propagatedBuildInputs = [ ExtUtilsDepends ExtUtilsPkgConfig Glib Gtk2 Pango pkgs.gtk2 ];
+    meta = {
+      license = stdenv.lib.licenses.gpl2;
     };
   };
 
@@ -10787,6 +10844,21 @@ let self = _self // overrides; _self = with self; {
     };
   };
 
+  ParallelForkManager = buildPerlPackage rec {
+    name = "Parallel-ForkManager-1.19";
+    src = fetchurl {
+      url = "mirror://cpan/authors/id/Y/YA/YANICK/${name}.tar.gz";
+      sha256 = "f1de2e9875eeb77d65f80338905dedd522f3913822502982f805aa71cde5a472";
+    };
+    buildInputs = [ TestWarn ];
+    meta = {
+      homepage = https://github.com/dluxhu/perl-parallel-forkmanager;
+      description = "A simple parallel processing fork manager";
+      license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ];
+      maintainers = [ maintainers.rycee ];
+    };
+  };
+
   ParallelPrefork = buildPerlPackage {
     name = "Parallel-Prefork-0.17";
     src = fetchurl {
@@ -12859,10 +12931,10 @@ let self = _self // overrides; _self = with self; {
   };
 
   SubQuote = buildPerlPackage rec {
-    name = "Sub-Quote-2.003001";
+    name = "Sub-Quote-2.005000";
     src = fetchurl {
       url = "mirror://cpan/authors/id/H/HA/HAARG/${name}.tar.gz";
-      sha256 = "9d471d8e13e7ce4793d5a5ec04a60fface14dd53be78dd94d228871915cfd1f9";
+      sha256 = "44b145111bee7b0001818e77f7ce587153232dbc97351f4c5ed34522372b64ff";
     };
     buildInputs = [ TestFatal ];
     meta = {
@@ -15065,6 +15137,8 @@ let self = _self // overrides; _self = with self; {
     meta = {
       description = "Line wrapping module with support for multibyte, fullwidth, and combining characters and languages without whitespaces between words";
       license = with stdenv.lib.licenses; [ artistic1 gpl2 ];
+      # bogus use of glibc, pretty sure, think this is what we have glibcLocales for?
+      broken = stdenv.hostPlatform.libc != "glibc";
     };
   };
 
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 91fdbdfc10e2..8c2317ffa0eb 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -203,6 +203,8 @@ in {
 
   bugseverywhere = callPackage ../applications/version-management/bugseverywhere {};
 
+  dendropy = callPackage ../development/python-modules/dendropy { };
+
   dbf = callPackage ../development/python-modules/dbf { };
 
   dbfread = callPackage ../development/python-modules/dbfread { };
@@ -228,7 +230,7 @@ in {
   diff-match-patch = callPackage ../development/python-modules/diff-match-patch { };
 
   globus-sdk = callPackage ../development/python-modules/globus-sdk { };
-  
+
   gssapi = callPackage ../development/python-modules/gssapi { };
 
   h5py = callPackage ../development/python-modules/h5py {
@@ -239,6 +241,10 @@ in {
     hdf5 = pkgs.hdf5-mpi;
   };
 
+  habanero = callPackage ../development/python-modules/habanero { };
+
+  i3ipc = callPackage ../development/python-modules/i3ipc { };
+
   intelhex = callPackage ../development/python-modules/intelhex { };
 
   lmtpd = callPackage ../development/python-modules/lmtpd { };
@@ -248,7 +254,7 @@ in {
   };
 
   mwoauth = callPackage ../development/python-modules/mwoauth { };
-  
+
   neuron = pkgs.neuron.override {
     inherit python;
   };
@@ -326,6 +332,8 @@ in {
     callPackage = pkgs.callPackage;
   };
 
+  pyparser = callPackage ../development/python-modules/pyparser { };
+
   pyqt4 = callPackage ../development/python-modules/pyqt/4.x.nix {
     pythonPackages = self;
   };
@@ -351,7 +359,7 @@ in {
   };
 
   pytest-tornado = callPackage ../development/python-modules/pytest-tornado { };
-  
+
   python-sql = callPackage ../development/python-modules/python-sql { };
 
   python-stdnum = callPackage ../development/python-modules/python-stdnum { };
@@ -410,6 +418,8 @@ in {
 
   adal = callPackage ../development/python-modules/adal { };
 
+  aioconsole = callPackage ../development/python-modules/aioconsole { };
+
   aiodns = callPackage ../development/python-modules/aiodns { };
 
   aiofiles = callPackage ../development/python-modules/aiofiles { };
@@ -481,7 +491,7 @@ in {
       homepage = https://github.com/pazz/alot;
       description = "Terminal MUA using notmuch mail";
       platforms = platforms.linux;
-      maintainers = with maintainers; [ garbas profpatsch ];
+      maintainers = with maintainers; [ garbas ];
     };
   };
 
@@ -596,6 +606,8 @@ in {
 
   area53 = callPackage ../development/python-modules/area53 { };
 
+  arxiv2bib = callPackage ../development/python-modules/arxiv2bib { };
+
   chai = callPackage ../development/python-modules/chai { };
 
   chainmap = callPackage ../development/python-modules/chainmap { };
@@ -2223,39 +2235,7 @@ in {
     '';
   };
 
-  celery = buildPythonPackage rec {
-    name = "celery-${version}";
-    version = "4.0.2";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/c/celery/${name}.tar.gz";
-      sha256 = "0kgmbs3fl9879n48p4m79nxy9by2yhvxq1jdvlnqzzvkdb2sdmg3";
-    };
-
-    # Fixes testsuite for python-3.6
-    # From ubuntu packaging: https://launchpad.net/ubuntu/+archive/primary/+files/celery_4.0.2-0ubuntu1.debian.tar.xz
-    # (linked from https://launchpad.net/ubuntu/+source/celery)
-    # https://github.com/celery/celery/pull/3736#issuecomment-274155454 from upstream
-    patches = [ ../development/python-modules/celery/fix_endless_python3.6_loop_logger_isa.patch ];
-
-    # make /etc/protocols accessible to fix socket.getprotobyname('tcp') in sandbox
-    preCheck = ''
-      export NIX_REDIRECTS=/etc/protocols=${pkgs.iana-etc}/etc/protocols \
-        LD_PRELOAD=${pkgs.libredirect}/lib/libredirect.so
-    '';
-    postCheck = ''
-      unset NIX_REDIRECTS LD_PRELOAD
-    '';
-
-    buildInputs = with self; [ pytest case ];
-    propagatedBuildInputs = with self; [ kombu billiard pytz anyjson amqp eventlet ];
-
-    meta = {
-      homepage = https://github.com/celery/celery/;
-      description = "Distributed task queue";
-      license = licenses.bsd3;
-    };
-  };
+  celery = callPackage ../development/python-modules/celery { pytest = self.pytest_32; };
 
   cerberus = buildPythonPackage rec {
     name = "Cerberus-${version}";
@@ -2785,65 +2765,9 @@ in {
     };
   };
 
-  cryptography = buildPythonPackage rec {
-    # also bump cryptography_vectors
-    pname = "cryptography";
-    name = "${pname}-${version}";
-    version = "2.0.3";
-
-    src = fetchPypi {
-      inherit pname version;
-      sha256 = "d04bb2425086c3fe86f7bc48915290b13e798497839fbb18ab7f6dffcf98cc3a";
-    };
+  cryptography = callPackage ../development/python-modules/cryptography { };
 
-    outputs = [ "out" "dev" ];
-
-    buildInputs = [ pkgs.openssl self.cryptography_vectors ]
-               ++ optional stdenv.isDarwin pkgs.darwin.apple_sdk.frameworks.Security;
-    propagatedBuildInputs = with self; [
-      idna
-      asn1crypto
-      packaging
-      six
-    ] ++ optional (pythonOlder "3.4") enum34
-    ++ optional (pythonOlder "3.3") ipaddress
-    ++ optional (!isPyPy) cffi;
-
-    checkInputs = with self; [
-      pytest
-      pretend
-      iso8601
-      pytz
-      hypothesis
-    ];
-
-    # The test assumes that if we're on Sierra or higher, that we use `getentropy`, but for binary
-    # compatibility with pre-Sierra for binary caches, we hide that symbol so the library doesn't
-    # use it. This boils down to them checking compatibility with `getentropy` in two different places,
-    # so let's neuter the second test.
-    postPatch = ''
-      substituteInPlace ./tests/hazmat/backends/test_openssl.py --replace '"16.0"' '"99.0"'
-    '';
-
-    # IOKit's dependencies are inconsistent between OSX versions, so this is the best we
-    # can do until nix 1.11's release
-    __impureHostDeps = [ "/usr/lib" ];
-  };
-
-  cryptography_vectors = buildPythonPackage rec {
-      # also bump cryptography
-    pname = "cryptography_vectors";
-    version = self.cryptography.version;
-    name = "${pname}-${version}";
-
-    src = fetchPypi {
-      inherit pname version;
-      sha256 = "beb831aa73663a224f4d7520483ed02da544533bb03b26ec07a5f9a0dd0941e1";
-    };
-
-    # No tests included
-    doCheck = false;
-  };
+  cryptography_vectors = callPackage ../development/python-modules/cryptography_vectors { };
 
   curtsies = callPackage ../development/python-modules/curtsies { };
 
@@ -3206,9 +3130,9 @@ in {
     };
   };
 
-  pytest = self.pytest_33;
+  pytest = self.pytest_34;
 
-  pytest_33 = callPackage ../development/python-modules/pytest/default.nix{
+  pytest_34 = callPackage ../development/python-modules/pytest/default.nix{
     hypothesis = self.hypothesis.override {
       # hypothesis requires pytest that causes dependency cycle
       doCheck = false;
@@ -3216,6 +3140,15 @@ in {
     };
   };
 
+  # Needed for celery
+  pytest_32 = self.pytest_34.overrideAttrs( oldAttrs: rec {
+    version = "3.2.5";
+    src = oldAttrs.src.override {
+      inherit version;
+      sha256 = "6d5bd4f7113b444c55a3bbb5c738a3dd80d43563d063fc42dcb0aaefbdd78b81";
+    };
+  });
+
   pytest-httpbin = callPackage ../development/python-modules/pytest-httpbin { };
 
   pytest-asyncio = callPackage ../development/python-modules/pytest-asyncio { };
@@ -3328,27 +3261,7 @@ in {
     };
   };
 
-  pytest-mock = buildPythonPackage rec {
-    name = "${pname}-${version}";
-    pname = "pytest-mock";
-    version = "1.6.0";
-
-    buildInputs = with self; [ pytest setuptools_scm ];
-    propagatedBuildInputs = with self; [ mock ];
-
-    meta = {
-      description = "Thin-wrapper around the mock package for easier use with py.test.";
-      homepage    = "https://github.com/pytest-dev/pytest-mock";
-      license     = licenses.mit;
-      maintainers = with maintainers; [ nand0p ];
-      platforms   = platforms.all;
-    };
-
-    src = fetchPypi {
-      inherit pname version;
-      sha256 = "07qccww4bq9jxlc0fbhlspr13kcsixchsnl8vk4wdiyvsjy7r8c3";
-    };
-  };
+  pytest-mock = callPackage ../development/python-modules/pytest-mock { };
 
   pytest-timeout = callPackage ../development/python-modules/pytest-timeout { };
 
@@ -3690,7 +3603,7 @@ in {
 
     buildInputs = with self; [ pytest docutils ];
     propagatedBuildInputs = with self; [
-      dask six boto3 s3fs tblib locket msgpack click cloudpickle tornado
+      dask six boto3 s3fs tblib locket msgpack-python click cloudpickle tornado
       psutil botocore zict lz4 sortedcollections sortedcontainers
     ] ++ (if !isPy3k then [ singledispatch ] else []);
 
@@ -3842,8 +3755,6 @@ in {
     };
   });
 
-  nose-parameterized = callPackage ../development/python-modules/nose-parameterized {};
-
   neurotools = buildPythonPackage (rec {
     name = "NeuroTools-${version}";
     version = "0.3.1";
@@ -3925,27 +3836,6 @@ in {
     };
   });
 
-  ddar = buildPythonPackage {
-    name = "ddar-1.0";
-
-    src = pkgs.fetchurl {
-      url = "https://github.com/basak/ddar/archive/v1.0.tar.gz";
-      sha256 = "08lv7hrbhcv6hbl01sx8fgx3l8s2nn8rvcicdidafwm87bvi2nmr";
-    };
-
-    preBuild = ''
-      make -f Makefile.prep synctus/ddar_pb2.py
-    '';
-
-    propagatedBuildInputs = with self; [ protobuf ];
-
-    meta = {
-      description = "Unix de-duplicating archiver";
-      license = licenses.gpl3;
-      homepage = https://github.com/basak/ddar;
-    };
-  };
-
   decorator = callPackage ../development/python-modules/decorator { };
 
   deform = buildPythonPackage rec {
@@ -4601,6 +4491,8 @@ in {
     };
   };
 
+  fpdf = callPackage ../development/python-modules/fpdf { };
+
   fritzconnection = callPackage ../development/python-modules/fritzconnection { };
 
   frozendict = buildPythonPackage rec {
@@ -5239,6 +5131,30 @@ in {
 
   };
 
+  imbalanced-learn = buildPythonPackage rec {
+    name = "imbalanced-learn-${version}";
+    version = "0.3.2";
+
+    src = pkgs.fetchurl {
+      url = "mirror://pypi/i/imbalanced-learn/${name}.tar.gz";
+      sha256 = "0j76m0rrsvyqj9bimky9m7b609y5v6crf9apigww3xvcnchhj901";
+    };
+
+    preConfigure = ''
+      export HOME=$PWD
+    '';
+
+    propagatedBuildInputs = with self; [ scikitlearn ];
+    buildInputs = with self; [ nose pytest pandas ];
+
+    meta = {
+      description = "Library offering a number of re-sampling techniques commonly used in datasets showing strong between-class imbalance";
+      homepage = https://github.com/scikit-learn-contrib/imbalanced-learn;
+      license = with licenses; [ mit ];
+    };
+
+  };
+
   imread = buildPythonPackage rec {
     name = "python-imread-${version}";
     version = "0.6";
@@ -5349,10 +5265,14 @@ in {
     };
   };
 
+  JayDeBeApi = callPackage ../development/python-modules/JayDeBeApi {};
+
   jdcal = callPackage ../development/python-modules/jdcal { };
 
   internetarchive = callPackage ../development/python-modules/internetarchive {};
 
+  JPype1 = callPackage ../development/python-modules/JPype1 {};
+
   jsbeautifier = callPackage ../development/python-modules/jsbeautifier {};
 
   jug = callPackage ../development/python-modules/jug {};
@@ -5864,6 +5784,8 @@ in {
 
   paperwork-backend = callPackage ../applications/office/paperwork/backend.nix { };
 
+  papis-python-rofi = callPackage ../development/python-modules/papis-python-rofi { };
+
   pathspec = callPackage ../development/python-modules/pathspec { };
 
   pathtools = buildPythonPackage rec {
@@ -9784,7 +9706,7 @@ in {
 
   locustio = callPackage ../development/python-modules/locustio { };
 
-  llvmlite = callPackage ../development/python-modules/llvmlite {llvm=pkgs.llvm_5;};
+  llvmlite = callPackage ../development/python-modules/llvmlite { llvm = pkgs.llvm; };
 
   lockfile = buildPythonPackage rec {
     pname = "lockfile";
@@ -9839,32 +9761,7 @@ in {
 
   py_scrypt = callPackage ../development/python-modules/py_scrypt/default.nix { };
 
-  python_magic = buildPythonPackage rec {
-    name = "python-magic-0.4.10";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/p/python-magic/${name}.tar.gz";
-      sha256 = "1hx2sjd4fdswswj3yydn2azxb59rjmi9b7jzh94lf1wnxijjizbr";
-    };
-
-    propagatedBuildInputs = with self; [ pkgs.file ];
-
-    patchPhase = ''
-      substituteInPlace magic.py --replace "ctypes.util.find_library('magic')" "'${pkgs.file}/lib/libmagic${stdenv.hostPlatform.extensions.sharedLibrary}'"
-    '';
-
-    doCheck = false;
-
-    # TODO: tests are failing
-    #checkPhase = ''
-    #  ${python}/bin/${python.executable} ./test.py
-    #'';
-
-    meta = {
-      description = "A python interface to the libmagic file type identification library";
-      homepage = https://github.com/ahupp/python-magic;
-    };
-  };
+  python_magic = callPackage ../development/python-modules/python-magic { };
 
   magic = buildPythonPackage rec {
     name = "${pkgs.file.name}";
@@ -10221,6 +10118,8 @@ in {
     };
   };
 
+  micawber = callPackage ../development/python-modules/micawber { };
+
   minimock = buildPythonPackage rec {
     version = "1.2.8";
     name = "minimock-${version}";
@@ -10454,24 +10353,8 @@ in {
     };
   };
 
-  moinmoin = buildPythonPackage (rec {
-    name = "moinmoin-${ver}";
-    disabled = isPy3k;
-    ver = "1.9.8";
-
-    src = pkgs.fetchurl {
-      url = "http://static.moinmo.in/files/moin-${ver}.tar.gz";
-      sha256 = "19hi16iy75lpx9ch799djc4hr4gai5rmvi542n29x6zhikysfjx7";
-    };
-
-    meta = {
-      description = "Advanced, easy to use and extensible WikiEngine";
-
-      homepage = http://moinmo.in/;
-
-      license = licenses.gpl2Plus;
-    };
-  });
+  # Needed here because moinmoin is loaded as a Python library.
+  moinmoin = callPackage ../development/python-modules/moinmoin { };
 
   moretools = callPackage ../development/python-modules/moretools { };
 
@@ -10622,21 +10505,13 @@ in {
     };
   };
 
-  msgpack = buildPythonPackage rec {
-    name = "msgpack-python-${version}";
-    version = "0.4.7";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/m/msgpack-python/${name}.tar.gz";
-      sha256 = "0syd7bs83qs9qmxw540jbgsildbqk4yb57fmrlns1021llli402y";
-    };
+  msgpack = callPackage ../development/python-modules/msgpack {};
 
-    checkPhase = ''
-      py.test
+  msgpack-python = self.msgpack.overridePythonAttrs {
+    pname = "msgpack-python";
+    postPatch = ''
+      substituteInPlace setup.py --replace "TRANSITIONAL = False" "TRANSITIONAL = True"
     '';
-
-    buildInputs = with self; [ pytest ];
-    propagatedBuildInputs = with self; [ ];
   };
 
   msrplib = buildPythonPackage rec {
@@ -10994,6 +10869,7 @@ in {
     };
   };
 
+  mysql-connector = callPackage ../development/python-modules/mysql-connector { };
 
   mysql_connector_repackaged = buildPythonPackage rec {
     name = "mysql-connector-repackaged-0.3.1";
@@ -11402,7 +11278,7 @@ in {
 
     patches = singleton (pkgs.fetchurl {
       name = "libnotify07.patch";
-      url = "http://pkgs.fedoraproject.org/cgit/notify-python.git/plain/"
+      url = "http://src.fedoraproject.org/cgit/notify-python.git/plain/"
           + "libnotify07.patch?id2=289573d50ae4838a1658d573d2c9f4c75e86db0c";
       sha256 = "1lqdli13mfb59xxbq4rbq1f0znh6xr17ljjhwmzqb79jl3dig12z";
     });
@@ -11423,6 +11299,8 @@ in {
     };
   });
 
+  notify2 = callPackage ../development/python-modules/notify2 {};
+
   notmuch = buildPythonPackage rec {
     name = "python-${pkgs.notmuch.name}";
 
@@ -11534,25 +11412,7 @@ in {
     blas = pkgs.openblasCompat;
   };
 
-  numpydoc = buildPythonPackage rec {
-    pname = "numpydoc";
-    name = "${pname}-${version}";
-    version = "0.6.0";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/${builtins.substring 0 1 pname}/${pname}/${name}.tar.gz";
-      sha256 = "1ec573e91f6d868a9940d90a6599f3e834a2d6c064030fbe078d922ee21dcfa1";
-    };
-
-    buildInputs = [ self.nose ];
-    propagatedBuildInputs = [ self.sphinx self.matplotlib ];
-
-    meta = {
-      description = "Sphinx extension to support docstrings in Numpy format";
-      homepage = "https://github.com/numpy/numpydoc";
-      license = licenses.free;
-    };
-  };
+  numpydoc = callPackage ../development/python-modules/numpydoc { };
 
   numpy-stl = callPackage ../development/python-modules/numpy-stl { };
 
@@ -12406,6 +12266,8 @@ in {
     };
   };
 
+  parameterized = callPackage ../development/python-modules/parameterized { };
+
   paramz = callPackage ../development/python-modules/paramz { };
 
   parsel = buildPythonPackage rec {
@@ -12829,6 +12691,8 @@ in {
 
   kmsxx = callPackage ../development/libraries/kmsxx { };
 
+  pybase64 = callPackage ../development/python-modules/pybase64 { };
+
   pylibconfig2 = buildPythonPackage rec {
     name = "pylibconfig2-${version}";
     version = "0.2.4";
@@ -13235,6 +13099,8 @@ in {
     };
   };
 
+  pysam = callPackage ../development/python-modules/pysam { };
+
   pysaml2 = buildPythonPackage rec {
     name = "pysaml2-${version}";
     version = "3.0.2";
@@ -13392,7 +13258,7 @@ in {
     md5_path = "f6d33a8362dee358517d0a9e2ebdd044";
 
     src = pkgs.fetchurl rec {
-      url = "http://pkgs.fedoraproject.org/repo/pkgs/python-pyblock/"
+      url = "http://src.fedoraproject.org/repo/pkgs/python-pyblock/"
           + "${name}.tar.bz2/${md5_path}/${name}.tar.bz2";
       sha256 = "f6cef88969300a6564498557eeea1d8da58acceae238077852ff261a2cb1d815";
     };
@@ -13777,17 +13643,6 @@ in {
 
   pygments = callPackage ../development/python-modules/Pygments { };
 
-  # For Pelican 3.6.3
-  pygments_2_0 = self.pygments.overrideAttrs( oldAttrs: rec {
-    version = "2.0.2";
-    name = "Pygments-${version}";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/P/Pygments/${name}.tar.gz";
-      sha256 = "7320919084e6dac8f4540638a46447a3bd730fca172afc17d2c03eed22cf4f51";
-    };
-  });
-
   pygpgme = callPackage ../development/python-modules/pygpgme { };
 
   pylint = callPackage ../development/python-modules/pylint { };
@@ -14072,7 +13927,7 @@ in {
     md5_path = "d249f60aa89b1b4facd63f776925116d";
 
     src = pkgs.fetchurl rec {
-      url = "http://pkgs.fedoraproject.org/repo/pkgs/pykickstart/"
+      url = "http://src.fedoraproject.org/repo/pkgs/pykickstart/"
           + "${name}.tar.gz/${md5_path}/${name}.tar.gz";
       sha256 = "e0d0f98ac4c5607e6a48d5c1fba2d50cc804de1081043f9da68cbfc69cad957a";
     };
@@ -14463,6 +14318,8 @@ in {
 
   pylibacl = callPackage ../development/python-modules/pylibacl { };
 
+  pylibgen = callPackage ../development/python-modules/pylibgen { };
+
   pyliblo = buildPythonPackage rec {
     name = "pyliblo-${version}";
     version = "0.9.2";
@@ -14637,39 +14494,7 @@ in {
     doCheck = false;
   };
 
-  pyopenssl = buildPythonPackage rec {
-    pname = "pyOpenSSL";
-    name = "${pname}-${version}";
-    version = "17.2.0";
-
-    src = self.fetchPypi {
-      inherit pname version;
-      sha256 = "0d283g4zi0hr9papd24mjl70mi15gyzq6fx618rizi87dgipqqax";
-    };
-
-    outputs = [ "out" "dev" ];
-
-    preCheck = ''
-      sed -i 's/test_set_default_verify_paths/noop/' tests/test_ssl.py
-      # https://github.com/pyca/pyopenssl/issues/692
-      sed -i 's/test_fallback_default_verify_paths/noop/' tests/test_ssl.py
-    '';
-
-    checkPhase = ''
-      runHook preCheck
-      export LANG="en_US.UTF-8"
-      py.test
-      runHook postCheck
-    '';
-
-    # Seems to fail unpredictably on Darwin. See http://hydra.nixos.org/build/49877419/nixlog/1
-    # for one example, but I've also seen ContextTests.test_set_verify_callback_exception fail.
-    doCheck = !stdenv.isDarwin;
-
-    buildInputs = [ pkgs.openssl self.pytest pkgs.glibcLocales self.pretend self.flaky ];
-    propagatedBuildInputs = [ self.cryptography self.pyasn1 self.idna ];
-  };
-
+  pyopenssl = callPackage ../development/python-modules/pyopenssl { };
 
   pyquery = buildPythonPackage rec {
     name = "pyquery-${version}";
@@ -14810,6 +14635,7 @@ in {
       substituteInPlace "setup.cfg"                                     \
               --replace "/usr/local/include" "${pkgs.sqlite.dev}/include"   \
               --replace "/usr/local/lib" "${pkgs.sqlite.out}/lib"
+      ${stdenv.lib.optionalString (!stdenv.isDarwin) ''export LDSHARED="$CC -pthread -shared"''}
     '';
 
     meta = {
@@ -14936,28 +14762,13 @@ in {
     };
   };
 
-  pytz = buildPythonPackage rec {
-    name = "${pname}-${version}";
-    pname = "pytz";
-    version = "2017.2";
-
-    src = fetchPypi {
-      inherit pname version;
-      sha256 = "12cmd3j46d2gcw08bspvp6s9icfcvx88zjz52n1bli9dyvl5dh7m";
-      extension = "zip";
-    };
-
-    checkPhase = ''
-      python -m unittest discover -s pytz/tests
-    '';
-
-    meta = {
-      description = "World timezone definitions, modern and historical";
-      homepage = "http://pythonhosted.org/pytz";
-      license = licenses.mit;
-    };
+  pythonnet = callPackage ../development/python-modules/pythonnet {
+    # `mono >= 4.6` required to prevent crashes encountered with earlier versions.
+    mono = pkgs.mono46;
   };
 
+  pytz = callPackage ../development/python-modules/pytz { };
+
   pytzdata = callPackage ../development/python-modules/pytzdata { };
 
   pyutil = buildPythonPackage (rec {
@@ -15027,23 +14838,7 @@ in {
 
   pyaml = callPackage ../development/python-modules/pyaml { };
 
-  pyyaml = buildPythonPackage (rec {
-    name = "PyYAML-3.12";
-
-    src = pkgs.fetchurl {
-      url = "http://pyyaml.org/download/pyyaml/${name}.zip";
-      sha256 = "19s1lxi0idq4a0bpvld866pv5b16lqxypyswmsdi5ys4210jxj2s";
-    };
-
-    buildInputs = with self; [ pkgs.pyrex ];
-    propagatedBuildInputs = with self; [ pkgs.libyaml ];
-
-    meta = {
-      description = "The next generation YAML parser and emitter for Python";
-      homepage = http://pyyaml.org;
-      license = licenses.free; # !?
-    };
-  });
+  pyyaml = callPackage ../development/python-modules/pyyaml { };
 
   rabbitpy = buildPythonPackage rec {
     version = "0.26.2";
@@ -15214,20 +15009,7 @@ in {
 
   qtpy = callPackage ../development/python-modules/qtpy { };
 
-  quantities = buildPythonPackage rec {
-    name = "quantities-0.10.1";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/q/quantities/quantities-0.10.1.tar.gz";
-      sha256 = "2d27caf31a5e0c37130ac0c14bfa8f9412a5ff1fbf3378a1d6085594776c4315";
-    };
-
-    meta = with pkgs.stdenv.lib; {
-      description = "Quantities is designed to handle arithmetic and";
-      homepage = http://packages.python.org/quantities;
-      license = licenses.bsd2;
-    };
-  };
+  quantities = callPackage ../development/python-modules/quantities { };
 
   qutip = buildPythonPackage rec {
     name = "qutip-2.2.0";
@@ -15706,31 +15488,17 @@ in {
     };
   };
 
-  typing = buildPythonPackage rec {
-    name = "typing-${version}";
-    version = "3.5.3.0";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/t/typing/${name}.tar.gz";
-      sha256 = "08gz3grrh3vph5ib1w5x1ssnpzvj077x030lx63fxs4kwg3slbfa";
-    };
-
-    meta = {
-      description = "Backport of typing module to Python versions older than 3.5";
-      homepage = "https://docs.python.org/3.5/library/typing.html";
-      license = licenses.psfl;
-    };
-  };
+  typing = callPackage ../development/python-modules/typing { };
 
   typeguard = callPackage ../development/python-modules/typeguard { };
 
   ruamel_yaml = buildPythonPackage rec {
     name = "ruamel.yaml-${version}";
-    version = "0.13.7";
+    version = "0.15.35";
 
     src = pkgs.fetchurl {
       url = "mirror://pypi/r/ruamel.yaml/${name}.tar.gz";
-      sha256 = "1vca2552k0kmhr9msg1bbfdvp3p9im17x1a6npaw221vlgg15z7h";
+      sha256 = "0xggyfaj6vprggahf7cq8kp9j79rb7hn8ndk3bxj2sxvwhhliiwd";
     };
 
     # Tests cannot load the module to test
@@ -15963,22 +15731,7 @@ in {
     };
   };
 
-  simplegeneric = buildPythonPackage rec {
-    version = "0.8.1";
-    name = "simplegeneric-${version}";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/s/simplegeneric/${name}.zip";
-      sha256 = "dc972e06094b9af5b855b3df4a646395e43d1c9d0d39ed345b7393560d0b9173";
-    };
-
-    meta = {
-      description = "Simple generic functions";
-      homepage = http://cheeseshop.python.org/pypi/simplegeneric;
-      license = licenses.zpl21;
-    };
-  };
-
+  simplegeneric = callPackage ../development/python-modules/simplegeneric { };
 
   shortuuid = buildPythonPackage rec {
     name = "shortuuid-${version}";
@@ -16460,33 +16213,7 @@ in {
     };
   };
 
-  sympy = buildPythonPackage rec {
-    name = "sympy-1.0";
-
-    src = pkgs.fetchurl {
-      url    = "mirror://pypi/s/sympy/${name}.tar.gz";
-      sha256 = "1bpzjwr9hrr7w88v4vgnj9lr6vxcldc94si13n8xpr1rv08d5b1y";
-    };
-
-    buildInputs = [ pkgs.glibcLocales ];
-
-    propagatedBuildInputs = with self; [ mpmath ];
-
-    # Bunch of failures including transients.
-    doCheck = false;
-
-    preCheck = ''
-      export LANG="en_US.UTF-8"
-    '';
-
-    meta = {
-      description = "A Python library for symbolic mathematics";
-      homepage    = http://www.sympy.org/;
-      license     = licenses.bsd3;
-      maintainers = with maintainers; [ lovek323 ];
-      platforms   = platforms.unix;
-    };
-  };
+  sympy = callPackage ../development/python-modules/sympy { };
 
   pilkit = buildPythonPackage rec {
     name = "pilkit-1.1.4";
@@ -18069,7 +17796,7 @@ in {
     meta = {
       description = "Tree widgets for urwid";
       license = licenses.gpl3;
-      maintainers = with maintainers; [ profpatsch ];
+      maintainers = with maintainers; [ ];
     };
   };
 
@@ -18322,24 +18049,7 @@ EOF
     };
   };
 
-  webcolors = buildPythonPackage rec {
-    name = "webcolors-1.4";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/w/webcolors/${name}.tar.gz";
-      sha256 = "304fc95dab2848c7bf64f378356766e692c2f8b4a8b15fa3509544e6412936e8";
-    };
-
-    # error: invalid command 'test'
-    doCheck = false;
-
-    meta = {
-      description = "Library for working with color names/values defined by the HTML and CSS specifications";
-      homepage = https://bitbucket.org/ubernostrum/webcolors/overview/;
-      license = licenses.bsd3;
-      platforms = platforms.unix;
-    };
-  };
+  webcolors = callPackage ../development/python-modules/webcolors { };
 
   webencodings = callPackage ../development/python-modules/webencodings { };
 
@@ -20200,36 +19910,9 @@ EOF
     propagatedBuildInputs = with self; [];
   };
 
-  pymacaroons-pynacl = buildPythonPackage rec {
-    name = "pymacaroons-pynacl-${version}";
-    version = "0.9.3";
+  pymacaroons-pynacl = callPackage ../development/python-modules/pymacaroons-pynacl { };
 
-    src = pkgs.fetchgit {
-      url = "https://github.com/matrix-org/pymacaroons.git";
-      rev = "refs/tags/v${version}";
-      sha256 = "0bykjk01zdndp6gjr30x46blsn0cvxa7j0zh5g8raxwaawchjhii";
-    };
-
-    propagatedBuildInputs = with self; [ pynacl six ];
-  };
-
-  pynacl = buildPythonPackage rec {
-    name = "pynacl-${version}";
-    version = "0.3.0";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/P/PyNaCl/PyNaCl-0.3.0.tar.gz";
-      sha256 = "1hknxlp3a3f8njn19w92p8nhzl9jkfwzhv5fmxhmyq2m8hqrfj8j";
-    };
-
-    buildInputs = with self; [ pytest coverage ];
-    propagatedBuildInputs = with self; [pkgs.libsodium six cffi pycparser];
-
-    checkPhase = ''
-      coverage run --source nacl --branch -m pytest
-    '';
-
-  };
+  pynacl = callPackage ../development/python-modules/pynacl { };
 
   service-identity = callPackage ../development/python-modules/service_identity { };
 
@@ -20350,26 +20033,7 @@ EOF
     };
   };
 
-  weboob = buildPythonPackage rec {
-    name = "weboob-1.1";
-    disabled = ! isPy27;
-
-    src = pkgs.fetchurl {
-      url = "https://symlink.me/attachments/download/324/${name}.tar.gz";
-      sha256 = "0736c5wsck2abxlwvx8i4496kafk9xchkkzhg4dcfbj0isldih6b";
-    };
-
-    setupPyBuildFlags = ["--qt" "--xdg"];
-
-    propagatedBuildInputs = with self; [ pillow prettytable pyyaml dateutil gdata requests mechanize feedparser lxml pkgs.gnupg pyqt4 pkgs.libyaml simplejson cssselect futures pdfminer termcolor ];
-
-    meta = {
-      homepage = http://weboob.org;
-      description = "Collection of applications and APIs to interact with websites without requiring the user to open a browser";
-      license = licenses.agpl3;
-      maintainers = with maintainers; [ ];
-    };
-  };
+  weboob = callPackage ../development/python-modules/weboob { };
 
   datadiff = buildPythonPackage rec {
     name = "datadiff-1.1.6";
@@ -20545,21 +20209,7 @@ EOF
     };
   };
 
-  dicttoxml = buildPythonPackage rec {
-    name = "dicttoxml-1.6.4";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/d/dicttoxml/dicttoxml-1.6.4.tar.gz";
-      sha256 = "5f29e95fec56680823dc41911c04c2af08727ee53c1b60e83c489212bab71161";
-    };
-
-    propagatedBuildInputs = with self; [  ];
-
-    meta = {
-      description = "Summary";
-      homepage = https://github.com/quandyfactory/dicttoxml;
-    };
-  };
+  dicttoxml = callPackage ../development/python-modules/dicttoxml { };
 
   markdown2 = callPackage ../development/python-modules/markdown2 { };
 
@@ -20657,36 +20307,7 @@ EOF
 
   trollius = callPackage ../development/python-modules/trollius {};
 
-  neovim = buildPythonPackage rec {
-    version = "0.2.0";
-    name = "neovim-${version}";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/n/neovim/${name}.tar.gz";
-      sha256 = "1ywkgbrxd95cwlglihydmffcw2d2aji6562aqncymxs3ld5y02yn";
-    };
-
-    buildInputs = with self; [ nose ];
-
-    checkPhase = ''
-      nosetests
-    '';
-
-    # Tests require pkgs.neovim,
-    # which we cannot add because of circular dependency.
-    doCheck = false;
-
-    propagatedBuildInputs = with self; [ msgpack ]
-      ++ optional (!isPyPy) greenlet
-      ++ optional (pythonOlder "3.4") trollius;
-
-    meta = {
-      description = "Python client for Neovim";
-      homepage = "https://github.com/neovim/python-client";
-      license = licenses.asl20;
-      maintainers = with maintainers; [ garbas ];
-    };
-  };
+  neovim = callPackage ../development/python-modules/neovim {};
 
   neovim_gui = buildPythonPackage rec {
     name = "neovim-pygui-${self.neovim.version}";
@@ -21072,25 +20693,7 @@ EOF
     };
   };
 
-  ovh = buildPythonPackage rec {
-    name = "ovh-${version}";
-    version = "0.4.5";
-    doCheck = false; #test needs packages too explicit
-    buildInputs = with self; [ d2to1 ];
-    propagatedBuildInputs = with self; [ requests ];
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/o/ovh/ovh-${version}.tar.gz";
-      sha256 = "1wf2p1sbg34jpj97r3w5nx9pj6vp0mlprry3vw2xav3dv02qv2af";
-    };
-
-    meta = {
-      description = "Thin wrapper around OVH's APIs";
-      homepage = https://pypi.python.org/pypi/ovh;
-      license = licenses.bsd2;
-      maintainers = [ maintainers.makefu ];
-    };
-  };
+  ovh = callPackage ../development/python-modules/ovh { };
 
   willow = buildPythonPackage rec {
     name = "willow-${version}";
@@ -21633,11 +21236,10 @@ EOF
   tensorflow-tensorboard = callPackage ../development/python-modules/tensorflow-tensorboard { };
 
   tensorflow = callPackage ../development/python-modules/tensorflow rec {
-    bazel = pkgs.bazel_0_4;
     cudaSupport = pkgs.config.cudaSupport or false;
     inherit (pkgs.linuxPackages) nvidia_x11;
-    cudatoolkit = pkgs.cudatoolkit8;
-    cudnn = pkgs.cudnn6_cudatoolkit8;
+    cudatoolkit = pkgs.cudatoolkit9;
+    cudnn = pkgs.cudnn_cudatoolkit9;
   };
 
   tensorflowWithoutCuda = self.tensorflow.override {
@@ -21754,26 +21356,6 @@ EOF
     };
   };
 
-  pybrain = buildPythonPackage rec {
-    name = "pybrain-${version}";
-    version = "0.3.3";
-
-    src = pkgs.fetchurl {
-      url = "https://github.com/pybrain/pybrain/archive/${version}.tar.gz";
-      sha256 = "114m99vsrps2gjqfm3i3kxx4nibjhjdzphsy2bhrxa5q3h2q14dz";
-    };
-
-    propagatedBuildInputs = with self; [ scipy ];
-
-    meta = {
-      homepage = "http://pybrain.org/";
-      description = "Modular Machine Learning Library for Python";
-      license = licenses.bsd3;
-      maintainers = with maintainers; [ NikolaMandic ];
-      broken = true; # See https://github.com/NixOS/nixpkgs/pull/29198
-    };
-  };
-
   threadpool = buildPythonPackage rec {
     name = "threadpool-${version}";
     version = "1.3.2";
@@ -21832,6 +21414,8 @@ EOF
     };
   };
 
+  python-telegram-bot = callPackage ../development/python-modules/python-telegram-bot { };
+
   irc = buildPythonPackage rec {
     name = "irc-${version}";
     version = "14.2.2";
@@ -22066,24 +21650,7 @@ EOF
 
   whoosh = callPackage ../development/python-modules/whoosh { };
 
-  packet-python = buildPythonPackage rec {
-    name = "${pname}-${version}";
-    pname = "packet-python";
-    version = "1.33";
-    src = pkgs.fetchurl {
-      url = "https://pypi.python.org/packages/eb/82/f0506bd964501f958ac6a37e843ccb7bd9e712732886258314d55f0ec710/packet-python-1.33.tar.gz";
-      sha256 = "0bmvfmvjm8jx0y8sv0jf5mhv0h3v8idx0sc5myxs7ig200584dd3";
-    };
-    propagatedBuildInputs = with self; [ requests ];
-
-    meta = {
-      description = "A Python client for the Packet API.";
-      homepage    = "https://github.com/packethost/packet-python";
-      license     = licenses.lgpl3;
-      maintainers = with maintainers; [ dipinhora ];
-      platforms   = platforms.all;
-    };
-  };
+  packet-python = callPackage ../development/python-modules/packet-python { };
 
   pwntools = callPackage ../development/python-modules/pwntools { };
 
diff --git a/pkgs/top-level/release-cross.nix b/pkgs/top-level/release-cross.nix
index 8e1213f2344d..be6dd89bf7dd 100644
--- a/pkgs/top-level/release-cross.nix
+++ b/pkgs/top-level/release-cross.nix
@@ -16,6 +16,8 @@ let
     buildPackages.binutils = nativePlatforms;
     gmp = nativePlatforms;
     libcCross = nativePlatforms;
+    nix = nativePlatforms;
+    nixUnstable = nativePlatforms;
   };
 
   gnuCommon = lib.recursiveUpdate common {
@@ -50,6 +52,15 @@ let
     buildPackages.binutils = darwin;
   };
 
+  rpiCommon = linuxCommon // {
+    vim = nativePlatforms;
+    unzip = nativePlatforms;
+    ddrescue = nativePlatforms;
+    lynx = nativePlatforms;
+    patchelf = nativePlatforms;
+    buildPackages.binutils = nativePlatforms;
+    mpg123 = nativePlatforms;
+  };
 in
 
 {
@@ -111,19 +122,14 @@ in
   fuloongminipc = mapTestOnCross lib.systems.examples.fuloongminipc linuxCommon;
 
   /* Linux on Raspberrypi */
-  rpi = mapTestOnCross lib.systems.examples.raspberryPi (linuxCommon // {
-    vim = nativePlatforms;
-    unzip = nativePlatforms;
-    ddrescue = nativePlatforms;
-    lynx = nativePlatforms;
-    patchelf = nativePlatforms;
-    buildPackages.binutils = nativePlatforms;
-    mpg123 = nativePlatforms;
-  });
+  rpi = mapTestOnCross lib.systems.examples.raspberryPi rpiCommon;
+  rpi-musl = mapTestOnCross lib.systems.examples.muslpi rpiCommon;
 
   /* Linux on Aarch64 (TODO make android for real)  */
-  android = mapTestOnCross lib.systems.examples.aarch64-multiplatform (linuxCommon // {
-  });
+  android = mapTestOnCross lib.systems.examples.aarch64-multiplatform linuxCommon;
+  aarch64-musl = mapTestOnCross lib.systems.examples.aarch64-multiplatform-musl linuxCommon;
+
+  x86_64-musl = mapTestOnCross lib.systems.examples.musl64 linuxCommon;
 
   /* Cross-built bootstrap tools for every supported platform */
   bootstrapTools = let
diff --git a/pkgs/top-level/release.nix b/pkgs/top-level/release.nix
index 5358738acb66..e7f8d3f2e4ca 100644
--- a/pkgs/top-level/release.nix
+++ b/pkgs/top-level/release.nix
@@ -112,6 +112,14 @@ let
               jobs.tests.cc-wrapper-clang-39.x86_64-darwin
               jobs.tests.cc-wrapper-libcxx-39.x86_64-linux
               jobs.tests.cc-wrapper-libcxx-39.x86_64-darwin
+              jobs.tests.cc-wrapper-clang-4.x86_64-linux
+              jobs.tests.cc-wrapper-clang-4.x86_64-darwin
+              jobs.tests.cc-wrapper-libcxx-4.x86_64-linux
+              jobs.tests.cc-wrapper-libcxx-4.x86_64-darwin
+              jobs.tests.cc-wrapper-clang-5.x86_64-linux
+              jobs.tests.cc-wrapper-clang-5.x86_64-darwin
+              jobs.tests.cc-wrapper-libcxx-5.x86_64-linux
+              jobs.tests.cc-wrapper-libcxx-5.x86_64-darwin
               jobs.tests.cc-multilib-gcc.x86_64-linux
               jobs.tests.cc-multilib-clang.x86_64-linux
               jobs.tests.stdenv-inputs.x86_64-linux